VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 2.1E-42 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 SUPERFAMILY SSF52540 6 204 6.91E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.07 T 15-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 Gene3D G3DSA:3.40.50.300 6 213 1.8E-61 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 9.5E-89 T 15-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 178 191 2.4E-36 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 41 52 2.4E-36 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 156 167 2.4E-36 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 86 101 2.4E-36 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 142 152 2.4E-36 T 15-10-2018 VIBNI_A2378 ef7e6065d3c3840ca8b122ffef7bbe3e 213 PRINTS PR00988 Uridine kinase signature 7 24 2.4E-36 T 15-10-2018 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 Gene3D G3DSA:1.10.10.60 196 304 6.5E-26 T 15-10-2018 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 5.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 5.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 SUPERFAMILY SSF46689 254 301 4.93E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 Pfam PF12833 Helix-turn-helix domain 222 300 5.9E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1210 52368d9a89b6d187655e3c39223de591 305 SMART SM00342 216 299 8.3E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SMART SM00387 557 670 7.1E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 669 1.6E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Gene3D G3DSA:3.30.565.10 516 672 3.7E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 384 3.6E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Gene3D G3DSA:1.10.287.130 406 509 7.5E-19 T 15-10-2018 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Pfam PF13426 PAS domain 282 376 1.6E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SUPERFAMILY SSF55874 518 669 8.38E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Pfam PF08448 PAS fold 22 130 3.7E-16 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Gene3D G3DSA:3.30.450.20 7 144 1.9E-22 T 15-10-2018 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SUPERFAMILY SSF55785 126 181 1.48E-5 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 5.9E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 5.9E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 612 5.9E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 626 5.9E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SUPERFAMILY SSF55785 252 375 6.85E-10 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SUPERFAMILY SSF55785 16 127 9.14E-11 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SMART SM00091 16 82 0.12 T 15-10-2018 IPR000014 PAS domain VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 SMART SM00091 267 336 0.0024 T 15-10-2018 IPR000014 PAS domain VIBNI_B0593 37334affe3689c0b3c3b9685c5c7f43a 682 Gene3D G3DSA:3.30.450.20 250 382 7.1E-12 T 15-10-2018 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 8.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 8.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 8.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 8.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 1.3E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SUPERFAMILY SSF55785 626 741 7.54E-10 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SUPERFAMILY SSF55874 843 1002 1.44E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Gene3D G3DSA:1.10.287.130 747 851 1.7E-15 T 15-10-2018 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Pfam PF12860 PAS fold 634 747 7.1E-45 T 15-10-2018 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.8E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Gene3D G3DSA:3.30.450.20 616 746 1.9E-12 T 15-10-2018 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SUPERFAMILY SSF52172 1025 1142 1.08E-18 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SUPERFAMILY SSF47384 773 854 2.94E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SMART SM00448 1026 1139 4.0E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SMART SM00388 788 853 4.1E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Gene3D G3DSA:3.40.50.2300 1022 1143 2.4E-17 T 15-10-2018 VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 SMART SM00387 897 1006 6.7E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Gene3D G3DSA:3.30.565.10 858 1011 1.7E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3293 3d18e65fb7dac463e933b46dd8d6cb80 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 5.9E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 Pfam PF13567 Domain of unknown function (DUF4131) 32 173 1.9E-6 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 Pfam PF00753 Metallo-beta-lactamase superfamily 506 683 3.5E-14 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 Pfam PF03772 Competence protein 209 472 5.7E-56 T 15-10-2018 IPR004477 ComEC/Rec2-related protein VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 Gene3D G3DSA:3.60.15.10 498 736 1.5E-46 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 231 409 7.0E-26 T 15-10-2018 IPR004477 ComEC/Rec2-related protein VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 117 718 1.3E-131 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 SMART SM00849 508 689 7.3E-11 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A1077 fa5d90f3a510b8a8bade8989711f7a99 752 SUPERFAMILY SSF56281 496 737 1.49E-44 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B2158 182f6bd14e2bdba884ced32a3e3c7207 265 Pfam PF00005 ABC transporter 23 171 7.1E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2158 182f6bd14e2bdba884ced32a3e3c7207 265 SMART SM00382 31 220 2.7E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2158 182f6bd14e2bdba884ced32a3e3c7207 265 Gene3D G3DSA:3.40.50.300 7 260 1.1E-67 T 15-10-2018 VIBNI_B2158 182f6bd14e2bdba884ced32a3e3c7207 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2158 182f6bd14e2bdba884ced32a3e3c7207 265 SUPERFAMILY SSF52540 8 233 1.13E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 Gene3D G3DSA:3.30.70.920 54 137 6.9E-22 T 15-10-2018 VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 Gene3D G3DSA:1.10.10.10 2 52 1.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.1E-20 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.1E-20 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.1E-20 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-21 T 15-10-2018 VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 SUPERFAMILY SSF46785 1 119 7.07E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 5.8E-19 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_A1874 9c0b0997d54a68e0d017536d7b5feff8 151 SMART SM00344 1 110 3.2E-46 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 Gene3D G3DSA:3.40.190.10 93 303 4.6E-97 T 15-10-2018 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-37 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.0E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 Gene3D G3DSA:3.40.190.10 167 267 4.6E-97 T 15-10-2018 VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 Gene3D G3DSA:1.10.10.10 1 86 1.0E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 SUPERFAMILY SSF46785 1 87 1.58E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2327 7cdad625fad4925117934a27fc51df47 324 SUPERFAMILY SSF53850 91 322 2.57E-41 T 15-10-2018 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 424 30.501 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 Pfam PF00815 Histidinol dehydrogenase 18 423 3.9E-130 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 423 8.5E-128 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 Gene3D G3DSA:3.40.50.1980 229 345 3.3E-100 T 15-10-2018 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 SUPERFAMILY SSF53720 24 424 2.75E-64 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PIRSF PIRSF000099 4 427 2.0E-109 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 Gene3D G3DSA:3.40.50.1980 27 227 3.3E-100 T 15-10-2018 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 104 131 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 247 266 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 166 192 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 225 246 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 196 221 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 PRINTS PR00083 Histidinol dehydrogenase signature 357 375 2.5E-59 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0231 5ce7633463b57b6bf23cfbdf13c38ecb 439 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 225 257 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0381 512dc6ae0e4492837f9da0f4d32e7df3 130 Pfam PF00581 Rhodanese-like domain 37 122 4.1E-10 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B0381 512dc6ae0e4492837f9da0f4d32e7df3 130 SMART SM00450 30 127 1.7E-7 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B0381 512dc6ae0e4492837f9da0f4d32e7df3 130 SUPERFAMILY SSF52821 29 130 1.83E-21 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B0381 512dc6ae0e4492837f9da0f4d32e7df3 130 Gene3D G3DSA:3.40.250.10 11 128 6.5E-25 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A1975 4b8415bc64b56bd6bf5a468ec5d7d0b0 193 Pfam PF13302 Acetyltransferase (GNAT) domain 13 157 4.1E-20 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1975 4b8415bc64b56bd6bf5a468ec5d7d0b0 193 SUPERFAMILY SSF55729 8 181 4.22E-41 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1975 4b8415bc64b56bd6bf5a468ec5d7d0b0 193 Gene3D G3DSA:3.40.630.30 6 186 4.0E-48 T 15-10-2018 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 2.7E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 3.6E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Gene3D G3DSA:3.40.50.300 216 381 3.4E-104 T 15-10-2018 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Pfam PF12631 MnmE helical domain 122 450 1.1E-61 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 SUPERFAMILY SSF52540 70 371 1.33E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 SUPERFAMILY SSF116878 120 453 1.57E-52 T 15-10-2018 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.1E-35 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Gene3D G3DSA:3.30.1360.120 1 120 2.1E-39 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.2E-102 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Gene3D G3DSA:1.20.120.430 121 453 3.4E-104 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VIBNI_A3885 0a3abcfbb65b4300ea1c82bc5c0c4bbf 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.155 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2123 2134 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00501 AMP-binding enzyme 1971 2385 3.6E-82 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00501 AMP-binding enzyme 457 875 7.3E-81 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF47336 978 1050 8.35E-14 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 961 5.4E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF13193 AMP-binding enzyme C-terminal domain 2393 2466 7.3E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF56801 419 998 9.81E-133 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 1250 1480 8.89E-26 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.30 3206 3447 2.7E-69 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 1071 1262 3.34E-34 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00668 Condensation domain 28 436 1.2E-18 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00668 Condensation domain 1516 1951 3.0E-64 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00668 Condensation domain 2573 3007 4.9E-67 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00668 Condensation domain 3023 3454 4.4E-48 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00668 Condensation domain 1075 1480 3.0E-61 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 187 420 4.45E-16 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.30 2738 2996 2.2E-54 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.30 1235 1480 1.7E-43 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.10 3030 3393 2.7E-69 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 2751 2995 9.12E-28 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 24 176 7.67E-15 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.10 2562 2737 8.3E-42 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.10 1062 1234 3.4E-40 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.30 1700 1943 8.1E-81 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:1.10.1200.10 977 1055 6.5E-19 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:1.10.1200.10 2482 2561 7.4E-19 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.40.50.12780 1958 2379 1.8E-116 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.40.50.12780 446 869 1.1E-112 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF56801 1963 2503 8.24E-134 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.300.30 2380 2481 5.8E-32 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.300.30 870 976 8.6E-32 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 1520 1698 1.45E-33 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF47336 2483 2556 4.32E-14 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 611 622 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 2577 2747 4.82E-32 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2866 3016 1.2E-33 T 15-10-2018 IPR010060 Non-ribosomal peptide synthase VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 1701 1941 1.78E-30 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.10 1520 1888 8.1E-81 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00550 Phosphopantetheine attachment site 2493 2555 1.1E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Pfam PF00550 Phosphopantetheine attachment site 989 1049 2.0E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 478 899 7.0E-116 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1992 2409 3.2E-117 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 3029 3203 1.08E-28 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2515 2530 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 SUPERFAMILY SSF52777 3206 3446 7.67E-28 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.30 180 431 2.7E-31 T 15-10-2018 VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1010 1025 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_B0988 e02f7c8fd4b0ca650ff5b07b4d4abdeb 3463 Gene3D G3DSA:3.30.559.10 25 369 2.7E-31 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0206 f1acc8854a582d84d9c2125e3d0889c8 329 SUPERFAMILY SSF51556 5 325 2.6E-83 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0206 f1acc8854a582d84d9c2125e3d0889c8 329 Gene3D G3DSA:3.20.20.140 1 326 1.1E-93 T 15-10-2018 VIBNI_B0206 f1acc8854a582d84d9c2125e3d0889c8 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 322 1.9E-74 T 15-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 VIBNI_A0659 022268fc3965b022caabe11cc2d854a2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 5.1E-54 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0659 022268fc3965b022caabe11cc2d854a2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 6.4E-57 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0659 022268fc3965b022caabe11cc2d854a2 156 SUPERFAMILY SSF52121 4 154 7.85E-60 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0659 022268fc3965b022caabe11cc2d854a2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 30.954 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0659 022268fc3965b022caabe11cc2d854a2 156 Gene3D G3DSA:3.40.50.960 1 156 1.4E-63 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 Gene3D G3DSA:1.10.10.10 5 90 2.2E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 SUPERFAMILY SSF53850 94 295 3.91E-37 T 15-10-2018 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 Gene3D G3DSA:3.40.190.290 94 293 5.1E-55 T 15-10-2018 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.7E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 SUPERFAMILY SSF46785 9 87 3.36E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0048 779a3048582002f502b18f6e826ff166 298 Pfam PF03466 LysR substrate binding domain 93 293 1.3E-37 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0757 18a48e72812cc2d1e8457caa3a942be0 184 SUPERFAMILY SSF52833 46 176 7.95E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0757 18a48e72812cc2d1e8457caa3a942be0 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 176 1.3E-69 T 15-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VIBNI_A0757 18a48e72812cc2d1e8457caa3a942be0 184 Pfam PF08534 Redoxin 42 164 2.4E-25 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VIBNI_A0757 18a48e72812cc2d1e8457caa3a942be0 184 Gene3D G3DSA:3.40.30.10 19 184 6.0E-44 T 15-10-2018 VIBNI_A0757 18a48e72812cc2d1e8457caa3a942be0 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Pfam PF13193 AMP-binding enzyme C-terminal domain 942 1014 4.4E-9 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Pfam PF00668 Condensation domain 75 512 3.9E-93 T 15-10-2018 IPR001242 Condensation domain VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PIRSF PIRSF001617 254 652 3.8E-19 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PIRSF PIRSF001617 978 1122 8.5E-12 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PIRSF PIRSF001617 898 984 8.5E-17 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PIRSF PIRSF001617 844 904 0.0063 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PIRSF PIRSF001617 669 724 18.0 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Gene3D G3DSA:3.30.559.10 76 438 2.4E-120 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Pfam PF00501 AMP-binding enzyme 533 934 3.5E-90 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 554 958 1.2E-118 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Pfam PF00550 Phosphopantetheine attachment site 1042 1106 7.7E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1063 1078 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 SUPERFAMILY SSF56801 492 1051 3.27E-141 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Gene3D G3DSA:1.10.1200.10 1030 1115 1.7E-23 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PRINTS PR00154 AMP-binding signature 682 693 1.8E-5 T 15-10-2018 IPR020459 AMP-binding VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 PRINTS PR00154 AMP-binding signature 694 702 1.8E-5 T 15-10-2018 IPR020459 AMP-binding VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Gene3D G3DSA:3.30.300.30 928 1029 2.7E-32 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Gene3D G3DSA:3.40.50.12780 523 926 3.0E-117 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 SUPERFAMILY SSF47336 1031 1107 5.23E-16 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 Gene3D G3DSA:3.30.559.30 250 499 2.4E-120 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 ProSitePatterns PS00455 Putative AMP-binding domain signature. 687 698 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 SUPERFAMILY SSF52777 76 246 3.89E-39 T 15-10-2018 VIBNI_A3717 81c29564416dcd0f6f362e7875e77d5e 1124 SUPERFAMILY SSF52777 254 520 4.0E-55 T 15-10-2018 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 Pfam PF12833 Helix-turn-helix domain 186 263 1.2E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 SUPERFAMILY SSF46689 215 266 3.94E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 Gene3D G3DSA:1.10.10.60 158 271 1.4E-29 T 15-10-2018 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 SMART SM00342 179 261 1.6E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1075 c196891d21b21203a8cc6d3eac96acc6 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:3.10.20.310 264 346 4.4E-14 T 15-10-2018 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:3.10.20.310 18 91 4.4E-19 T 15-10-2018 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 808 25.64 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Pfam PF07244 Surface antigen variable number repeat 347 420 5.5E-16 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Pfam PF07244 Surface antigen variable number repeat 92 172 5.6E-11 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Pfam PF07244 Surface antigen variable number repeat 176 263 7.0E-16 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Pfam PF07244 Surface antigen variable number repeat 266 344 3.1E-9 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 808 1.0E-275 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 PIRSF PIRSF006076 1 808 1.9E-243 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:2.40.160.50 425 808 2.0E-121 T 15-10-2018 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:3.10.20.310 175 263 2.2E-23 T 15-10-2018 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:3.10.20.310 92 174 9.1E-17 T 15-10-2018 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Pfam PF01103 Surface antigen 448 808 2.6E-88 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VIBNI_A2496 652e4884cf4c244a540a153e3631e715 808 Gene3D G3DSA:3.10.20.310 347 424 1.6E-25 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Gene3D G3DSA:3.50.50.60 251 406 2.5E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 7.6E-23 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 7.6E-23 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 7.6E-23 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 7.6E-23 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Gene3D G3DSA:1.10.1060.10 13 143 4.7E-24 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 2.5E-198 T 15-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 SUPERFAMILY SSF46548 2 155 1.88E-35 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 SUPERFAMILY SSF51971 144 407 2.12E-61 T 15-10-2018 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 3.6E-24 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 3.7E-24 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Gene3D G3DSA:3.50.50.60 412 475 7.0E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0278 3a6f9a8f784127f66a3e9e122d36c6de 489 Gene3D G3DSA:3.40.50.720 144 250 9.4E-13 T 15-10-2018 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 Gene3D G3DSA:3.40.1380.20 342 476 7.6E-153 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.7E-27 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 Gene3D G3DSA:3.20.20.60 6 341 7.6E-153 T 15-10-2018 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 480 1.0E-164 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 SUPERFAMILY SSF52935 329 480 1.44E-36 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 SUPERFAMILY SSF51621 5 345 3.22E-85 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 Pfam PF00224 Pyruvate kinase, barrel domain 5 344 1.0E-128 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 Gene3D G3DSA:2.40.33.10 74 172 7.6E-153 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 SUPERFAMILY SSF50800 74 169 7.85E-24 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2340 583eb046506486916c7c0e5782e2928e 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.1E-53 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 Gene3D G3DSA:3.30.565.10 336 483 1.0E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 SUPERFAMILY SSF103190 103 187 1.8E-11 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 SMART SM00387 376 484 1.8E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 SMART SM00388 266 331 3.2E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 482 7.9E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 SUPERFAMILY SSF47384 262 329 1.8E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 5.3E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 5.3E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 5.3E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 SUPERFAMILY SSF55874 320 482 1.57E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 329 2.4E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 Gene3D G3DSA:3.30.450.20 77 177 2.7E-6 T 15-10-2018 VIBNI_B0179 d81ba02831f238dc591a2464c397d583 484 Gene3D G3DSA:1.10.287.130 259 331 2.3E-14 T 15-10-2018 VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 Pfam PF13609 Gram-negative porin 7 314 3.0E-21 T 15-10-2018 VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 88 110 8.5E-5 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 20 36 8.5E-5 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 217 234 8.5E-5 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 Gene3D G3DSA:2.40.160.10 20 336 3.8E-31 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_B0021 5031f16b7f1c161ebd73a97f2ad94781 336 SUPERFAMILY SSF56935 20 336 9.46E-35 T 15-10-2018 VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 PRINTS PR01576 Peptide deformylase signature 120 149 5.1E-37 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 PRINTS PR01576 Peptide deformylase signature 89 100 5.1E-37 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 PRINTS PR01576 Peptide deformylase signature 33 62 5.1E-37 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 PRINTS PR01576 Peptide deformylase signature 101 119 5.1E-37 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.452 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 Pfam PF01327 Polypeptide deformylase 4 152 1.7E-49 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 PIRSF PIRSF004749 1 173 4.0E-55 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 2.5E-60 T 15-10-2018 IPR023635 Peptide deformylase VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 Gene3D G3DSA:3.90.45.10 1 169 5.5E-65 T 15-10-2018 IPR036821 Peptide deformylase superfamily VIBNI_A3836 0c0cd49f7efc94eec97540816322bc3b 173 SUPERFAMILY SSF56420 3 165 5.5E-61 T 15-10-2018 IPR036821 Peptide deformylase superfamily VIBNI_A0949 ae50fd8bd10aa37caf55a8219223a2dc 498 Gene3D G3DSA:3.40.605.10 25 459 8.0E-141 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A0949 ae50fd8bd10aa37caf55a8219223a2dc 498 Gene3D G3DSA:3.40.309.10 251 451 8.0E-141 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A0949 ae50fd8bd10aa37caf55a8219223a2dc 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 482 3.6E-236 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VIBNI_A0949 ae50fd8bd10aa37caf55a8219223a2dc 498 Pfam PF00171 Aldehyde dehydrogenase family 17 478 1.1E-137 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0949 ae50fd8bd10aa37caf55a8219223a2dc 498 SUPERFAMILY SSF53720 3 484 3.93E-142 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 Pfam PF00171 Aldehyde dehydrogenase family 22 482 2.0E-152 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 Gene3D G3DSA:3.40.309.10 261 453 3.7E-160 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 Gene3D G3DSA:3.40.605.10 30 481 3.7E-160 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 SUPERFAMILY SSF53720 11 488 3.93E-150 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B2048 2770eeca7cc053279eeddfd7da0a88d2 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 Pfam PF01400 Astacin (Peptidase family M12A) 102 284 8.6E-57 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 PRINTS PR00480 Astacin family signature 124 142 3.3E-23 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 PRINTS PR00480 Astacin family signature 272 285 3.3E-23 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 PRINTS PR00480 Astacin family signature 195 212 3.3E-23 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 PRINTS PR00480 Astacin family signature 176 194 3.3E-23 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 PRINTS PR00480 Astacin family signature 232 247 3.3E-23 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 Gene3D G3DSA:2.60.120.380 300 395 8.5E-28 T 15-10-2018 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 Gene3D G3DSA:3.40.390.10 41 287 1.3E-71 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 SUPERFAMILY SSF55486 99 285 1.27E-53 T 15-10-2018 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 SMART SM00235 99 237 2.9E-41 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 VIBNI_B1478 8cd4d853a5279e5123884477b0b56fd2 397 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 324 382 1.0E-9 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Pfam PF01380 SIS domain 464 593 1.0E-23 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Pfam PF01380 SIS domain 293 419 9.5E-31 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 SUPERFAMILY SSF56235 2 234 3.09E-74 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Gene3D G3DSA:3.60.20.10 2 242 8.5E-83 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 SUPERFAMILY SSF53697 246 611 3.06E-109 T 15-10-2018 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Gene3D G3DSA:3.40.50.10490 449 596 1.4E-144 T 15-10-2018 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Gene3D G3DSA:3.40.50.10490 250 610 1.4E-144 T 15-10-2018 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Pfam PF13522 Glutamine amidotransferase domain 64 183 1.8E-21 T 15-10-2018 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.245 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VIBNI_A2882 9972015a4c11717fcc31cdbbd375ee20 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 1.6E-261 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 SMART SM00411 1 91 1.1E-43 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 Gene3D G3DSA:4.10.520.10 1 94 6.9E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 31.125 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 SUPERFAMILY SSF47729 1 91 5.89E-31 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.5E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.2E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.2E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.2E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2333 fb20892c55356f6a6fd26c6b14be15e4 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.4E-49 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VIBNI_A3149 4fc9eb5777b3eb28dd06a02c4685ebc6 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 6.6E-27 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A3149 4fc9eb5777b3eb28dd06a02c4685ebc6 206 Gene3D G3DSA:3.10.50.40 68 206 2.5E-50 T 15-10-2018 VIBNI_A3149 4fc9eb5777b3eb28dd06a02c4685ebc6 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 2.2E-25 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VIBNI_A3149 4fc9eb5777b3eb28dd06a02c4685ebc6 206 SUPERFAMILY SSF54534 7 205 3.54E-55 T 15-10-2018 VIBNI_A3149 4fc9eb5777b3eb28dd06a02c4685ebc6 206 Gene3D G3DSA:1.10.287.460 4 67 3.1E-20 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 Gene3D G3DSA:2.60.40.1180 478 556 7.3E-16 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 Gene3D G3DSA:3.90.400.10 109 171 2.9E-30 T 15-10-2018 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 SUPERFAMILY SSF51011 477 553 8.46E-15 T 15-10-2018 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 SUPERFAMILY SSF51445 6 474 3.23E-163 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 SMART SM00642 15 416 3.1E-161 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 Gene3D G3DSA:3.20.20.80 1 108 3.3E-49 T 15-10-2018 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 552 1.9E-262 T 15-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 Gene3D G3DSA:3.20.20.80 172 477 7.0E-114 T 15-10-2018 VIBNI_A2727 af3867398ae812822c3d6447b2e50b90 556 Pfam PF00128 Alpha amylase, catalytic domain 30 373 5.5E-128 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Gene3D G3DSA:1.20.120.160 908 1028 1.3E-10 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 631 6.4E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SUPERFAMILY SSF52172 785 911 8.82E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SUPERFAMILY SSF47384 387 468 2.94E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Gene3D G3DSA:3.40.50.2300 765 907 1.3E-40 T 15-10-2018 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SUPERFAMILY SSF158472 331 379 1.15E-6 T 15-10-2018 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SMART SM00388 402 467 4.0E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Gene3D G3DSA:1.20.1480.50 292 389 7.4E-11 T 15-10-2018 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SMART SM00387 514 634 3.1E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Pfam PF00072 Response regulator receiver domain 786 899 2.3E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Pfam PF00512 His Kinase A (phospho-acceptor) domain 403 467 4.6E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SUPERFAMILY SSF55874 456 631 3.67E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SMART SM00448 784 899 2.5E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 SUPERFAMILY SSF47226 882 1018 1.28E-16 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Pfam PF01627 Hpt domain 942 1020 1.7E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 573 5.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 631 5.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 612 5.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 587 5.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Gene3D G3DSA:1.10.287.130 391 467 4.0E-24 T 15-10-2018 VIBNI_A2461 a129da0c427289f174c5352fa3052f06 1030 Gene3D G3DSA:3.30.565.10 468 636 4.1E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.748 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.3E-16 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.7E-30 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 Gene3D G3DSA:1.20.5.710 2 51 8.5E-23 T 15-10-2018 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 Gene3D G3DSA:3.30.1390.10 52 122 1.1E-30 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 SUPERFAMILY SSF48300 4 58 2.75E-15 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 2.2E-47 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 100 5.0E-16 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3327 fa9700501af9e5b2a1dede04839c6579 122 SUPERFAMILY SSF54736 52 122 3.14E-24 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VIBNI_A2456 6ed74949c7b3234dee9c34110fee52aa 91 SUPERFAMILY SSF160191 1 89 4.32E-36 T 15-10-2018 IPR038068 YcgL-like superfamily VIBNI_A2456 6ed74949c7b3234dee9c34110fee52aa 91 Gene3D G3DSA:3.10.510.20 1 73 3.2E-29 T 15-10-2018 IPR038068 YcgL-like superfamily VIBNI_A2456 6ed74949c7b3234dee9c34110fee52aa 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.5 T 15-10-2018 IPR027354 YcgL domain VIBNI_A2456 6ed74949c7b3234dee9c34110fee52aa 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 4.0E-25 T 15-10-2018 IPR027354 YcgL domain VIBNI_A2456 6ed74949c7b3234dee9c34110fee52aa 91 Pfam PF05166 YcgL domain 3 74 6.8E-31 T 15-10-2018 IPR027354 YcgL domain VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 4.4E-53 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.7E-68 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 SUPERFAMILY SSF53178 5 194 3.79E-69 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.671 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 Gene3D G3DSA:3.40.50.1470 1 196 6.1E-75 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VIBNI_A2685 bcf2328df7d987526c8bb04eef83df3d 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VIBNI_A0255 20870731bb8a433dfb06a38aa24a9096 406 Gene3D G3DSA:3.30.1540.10 231 324 1.0E-114 T 15-10-2018 VIBNI_A0255 20870731bb8a433dfb06a38aa24a9096 406 SUPERFAMILY SSF89796 1 395 3.4E-112 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A0255 20870731bb8a433dfb06a38aa24a9096 406 Gene3D G3DSA:3.40.50.10540 5 389 1.0E-114 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A0255 20870731bb8a433dfb06a38aa24a9096 406 Pfam PF02515 CoA-transferase family III 5 371 2.3E-105 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 PIRSF PIRSF037116 11 274 4.0E-137 T 15-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 SMART SM00382 48 245 4.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 SUPERFAMILY SSF52540 18 270 5.65E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 Gene3D G3DSA:3.40.50.300 21 274 5.8E-70 T 15-10-2018 VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 Pfam PF00005 ABC transporter 40 195 3.4E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0021 d4c0eb1152e9118bc64350fc18222179 274 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 22 272 6.3E-114 T 15-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Gene3D G3DSA:3.10.310.40 748 857 2.1E-32 T 15-10-2018 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.963 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Pfam PF01411 tRNA synthetases class II (A) 7 554 1.9E-225 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 SMART SM00863 652 695 2.1E-20 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Gene3D G3DSA:3.30.54.20 623 676 5.3E-49 T 15-10-2018 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 SUPERFAMILY SSF50447 454 551 6.36E-19 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 SUPERFAMILY SSF55681 3 254 1.24E-108 T 15-10-2018 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 SUPERFAMILY SSF101353 255 462 1.27E-59 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Gene3D G3DSA:3.30.930.10 2 251 3.7E-120 T 15-10-2018 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Pfam PF02272 DHHA1 domain 723 856 1.3E-29 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.9E-17 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Gene3D G3DSA:3.30.980.10 562 696 5.3E-49 T 15-10-2018 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 SUPERFAMILY SSF55186 551 710 6.54E-51 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VIBNI_A0149 5575d517e00af0f1e00f362fb812c4ec 860 Gene3D G3DSA:2.40.30.130 464 551 4.0E-11 T 15-10-2018 VIBNI_B1476 7d25f69f2e9912ea561dd503bc7f7882 359 Gene3D G3DSA:3.10.450.50 64 187 4.1E-22 T 15-10-2018 VIBNI_B1476 7d25f69f2e9912ea561dd503bc7f7882 359 Gene3D G3DSA:3.10.450.50 196 319 3.5E-11 T 15-10-2018 VIBNI_B1476 7d25f69f2e9912ea561dd503bc7f7882 359 SUPERFAMILY SSF54427 73 182 3.17E-16 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B1476 7d25f69f2e9912ea561dd503bc7f7882 359 Pfam PF07366 SnoaL-like polyketide cyclase 74 181 9.4E-7 T 15-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 8.2E-20 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.0E-46 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 SUPERFAMILY SSF52922 533 664 1.44E-43 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 SMART SM00861 354 525 3.8E-66 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 SUPERFAMILY SSF52518 333 526 2.18E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Gene3D G3DSA:3.40.50.970 326 537 1.9E-83 T 15-10-2018 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.8E-166 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Gene3D G3DSA:3.40.50.920 538 664 1.1E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 Gene3D G3DSA:3.40.50.970 1 325 1.7E-131 T 15-10-2018 VIBNI_A0082 90521b7f01d62f641584a9d5f4d54ffc 664 SUPERFAMILY SSF52518 6 328 2.25E-120 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 PIRSF PIRSF002181 1 142 4.9E-52 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 Gene3D G3DSA:3.90.1180.10 1 142 1.5E-63 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.8E-64 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 SUPERFAMILY SSF52161 1 140 1.83E-60 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 Pfam PF00572 Ribosomal protein L13 15 138 1.3E-56 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VIBNI_A0207 fe8fd9e3138263584f0ea1f42b1d2eca 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.478 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VIBNI_B0290 0684f64ee9a6142f9ff2a4dbe30438f6 261 SUPERFAMILY SSF53335 15 258 4.18E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0290 0684f64ee9a6142f9ff2a4dbe30438f6 261 Pfam PF13649 Methyltransferase domain 50 152 3.9E-14 T 15-10-2018 VIBNI_B0290 0684f64ee9a6142f9ff2a4dbe30438f6 261 Gene3D G3DSA:3.40.50.150 14 260 7.8E-32 T 15-10-2018 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 Gene3D G3DSA:1.10.10.60 4 60 1.7E-19 T 15-10-2018 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 SUPERFAMILY SSF48498 101 199 1.22E-6 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 Gene3D G3DSA:1.10.357.10 63 203 1.2E-28 T 15-10-2018 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 8.5E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 SUPERFAMILY SSF46689 4 74 3.49E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1426 80c88cc727808a6a68b30ecfa6d273a2 203 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 2.2E-15 T 15-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 SUPERFAMILY SSF55120 77 316 6.99E-79 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 SMART SM00363 18 83 2.1E-8 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 Gene3D G3DSA:3.30.2350.10 84 315 9.9E-72 T 15-10-2018 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 Gene3D G3DSA:3.10.290.10 2 76 1.2E-23 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 8.5E-103 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 SUPERFAMILY SSF55174 17 68 1.24E-10 T 15-10-2018 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 8.2E-30 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0386 42776916b68a3c9856c9b519419279ae 324 Pfam PF01479 S4 domain 18 65 1.2E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 Gene3D G3DSA:3.30.260.10 138 410 7.7E-238 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.3E-96 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 SUPERFAMILY SSF48592 7 521 1.33E-75 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 SUPERFAMILY SSF52029 184 376 1.2E-83 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 SUPERFAMILY SSF54849 137 203 5.95E-24 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 Gene3D G3DSA:1.10.560.10 8 521 7.7E-238 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 15-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 Gene3D G3DSA:3.50.7.10 173 379 7.7E-238 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 6.2E-253 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A3249 d96841ac79bfa37e82b1492769648cbb 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.45 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 Gene3D G3DSA:3.30.420.40 119 290 4.5E-93 T 15-10-2018 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 Gene3D G3DSA:3.30.420.40 4 297 4.5E-93 T 15-10-2018 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 61.141 T 15-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 Pfam PF00480 ROK family 2 300 1.1E-68 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A1669 814531ac5c4a42922a0d64f24d3e4605 302 SUPERFAMILY SSF53067 1 299 3.89E-55 T 15-10-2018 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 SUPERFAMILY SSF53067 3 250 1.21E-77 T 15-10-2018 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 2.3E-66 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 SUPERFAMILY SSF53067 253 489 9.07E-55 T 15-10-2018 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 PIRSF PIRSF000538 2 489 1.1E-130 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 Gene3D G3DSA:3.30.420.40 1 250 1.1E-84 T 15-10-2018 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 Gene3D G3DSA:3.30.420.40 252 489 4.2E-60 T 15-10-2018 VIBNI_A0678 5f1f98da776a878a48c68d536f5a3d54 490 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 443 3.2E-38 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 SUPERFAMILY SSF54211 6 134 2.16E-40 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.1E-11 T 15-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 Gene3D G3DSA:3.30.230.30 3 136 1.2E-47 T 15-10-2018 IPR036956 Impact, N-terminal domain superfamily VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 2.1E-25 T 15-10-2018 IPR001498 Impact, N-terminal VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 201 3.1E-64 T 15-10-2018 IPR015796 Impact family, bacterial/archaeal VIBNI_A0033 c03e99cad2d226d34f6116f06e6d149b 206 SUPERFAMILY SSF54980 138 204 3.74E-10 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_B1774 26ac9c44ba84412313efa75bae05be6f 455 Pfam PF07670 Nucleoside recognition 141 235 5.5E-8 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Pfam PF13426 PAS domain 421 482 0.3 T 15-10-2018 IPR000014 PAS domain VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Pfam PF13188 PAS domain 539 590 0.0096 T 15-10-2018 IPR000014 PAS domain VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Gene3D G3DSA:3.30.450.20 404 522 8.2E-25 T 15-10-2018 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Gene3D G3DSA:3.30.450.20 534 653 7.6E-30 T 15-10-2018 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Gene3D G3DSA:3.30.450.20 275 392 2.5E-27 T 15-10-2018 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SUPERFAMILY SSF58104 717 998 9.02E-74 T 15-10-2018 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SMART SM00283 750 997 1.8E-97 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 809 965 6.5E-57 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 Gene3D G3DSA:1.10.287.950 696 999 4.6E-88 T 15-10-2018 VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SMART SM00091 408 473 30.0 T 15-10-2018 IPR000014 PAS domain VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SMART SM00091 278 343 4.0 T 15-10-2018 IPR000014 PAS domain VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SMART SM00091 538 608 2.5 T 15-10-2018 IPR000014 PAS domain VIBNI_B0830 72a6ac02122060f998a5f402c65a1e5d 1012 SMART SM01358 1 183 5.5E-8 T 15-10-2018 IPR032255 Helical bimodular sensor domain VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Pfam PF00704 Glycosyl hydrolases family 18 161 575 1.7E-85 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:3.20.20.80 162 577 1.9E-167 T 15-10-2018 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:2.60.40.10 691 778 8.2E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF54556 461 546 1.57E-17 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SMART SM00495 799 841 6.7E-7 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF51445 135 588 3.99E-91 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SMART SM00636 159 575 2.1E-154 T 15-10-2018 IPR011583 Chitinase II GO:0008061 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF51055 786 843 7.85E-13 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF49299 593 686 1.26E-7 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Pfam PF14600 Cellulose-binding domain 789 842 1.9E-25 T 15-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SMART SM00089 694 780 0.19 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SMART SM00089 597 687 4.4E-5 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SMART SM00089 33 134 1.3 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:3.10.50.10 466 551 1.9E-167 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF81296 21 133 5.46E-28 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:2.60.40.10 594 690 4.8E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 SUPERFAMILY SSF49299 690 778 1.88E-5 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:2.10.10.20 785 843 3.0E-19 T 15-10-2018 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Pfam PF08329 Chitinase A, N-terminal domain 21 156 2.1E-48 T 15-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_A0922 20a0176ef8ec7f155add803b155c20c2 846 Gene3D G3DSA:2.60.40.10 22 132 2.4E-39 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2372 e50c6cc128b9624dc32eb4be34866208 519 Pfam PF00916 Sulfate permease family 13 374 1.1E-57 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VIBNI_A2372 e50c6cc128b9624dc32eb4be34866208 519 Pfam PF01740 STAS domain 416 503 4.9E-6 T 15-10-2018 IPR002645 STAS domain VIBNI_A2372 e50c6cc128b9624dc32eb4be34866208 519 Gene3D G3DSA:3.30.750.24 408 499 4.6E-27 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A2372 e50c6cc128b9624dc32eb4be34866208 519 SUPERFAMILY SSF52091 416 498 2.35E-10 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 SUPERFAMILY SSF52540 141 385 5.14E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 SUPERFAMILY SSF46689 382 469 5.38E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Pfam PF00158 Sigma-54 interaction domain 142 308 7.8E-71 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Pfam PF02954 Bacterial regulatory protein, Fis family 427 467 3.1E-15 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 SMART SM00448 4 115 5.1E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 SMART SM00382 162 309 1.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 SUPERFAMILY SSF52172 2 187 2.28E-43 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Gene3D G3DSA:1.10.10.60 386 470 1.3E-26 T 15-10-2018 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Gene3D G3DSA:1.10.8.60 314 385 1.7E-19 T 15-10-2018 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Gene3D G3DSA:3.40.50.300 126 313 1.5E-67 T 15-10-2018 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 1.1E-238 T 15-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A3481 2f34e86effafdd54112fdef75275a258 470 Gene3D G3DSA:3.40.50.2300 1 124 8.0E-40 T 15-10-2018 VIBNI_B1390 6ba347b66db878946b3ce3d36e2e52d3 143 Gene3D G3DSA:2.170.150.70 3 115 4.3E-10 T 15-10-2018 VIBNI_B1390 6ba347b66db878946b3ce3d36e2e52d3 143 SUPERFAMILY SSF51316 1 86 2.82E-8 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B0374 a39133230e953e8b69d7e00aeb560c6e 208 Pfam PF00857 Isochorismatase family 40 206 2.5E-24 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 VIBNI_B0374 a39133230e953e8b69d7e00aeb560c6e 208 Gene3D G3DSA:3.40.50.850 35 208 2.2E-26 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_B0374 a39133230e953e8b69d7e00aeb560c6e 208 SUPERFAMILY SSF52499 37 207 2.62E-27 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_A3400 0d8157a01e902957d61b9e219c7e3b4b 181 Pfam PF04220 Der GTPase activator (YihI) 22 171 1.9E-44 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 VIBNI_A3400 0d8157a01e902957d61b9e219c7e3b4b 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.472 T 15-10-2018 IPR007336 Der GTPase activator GO:0005096 VIBNI_A3292 8d0197f0e561539f73053b6a0f775103 197 SUPERFAMILY SSF56925 32 197 5.49E-19 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A3292 8d0197f0e561539f73053b6a0f775103 197 Pfam PF13505 Outer membrane protein beta-barrel domain 8 197 1.5E-15 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A3292 8d0197f0e561539f73053b6a0f775103 197 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 189 197 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 VIBNI_A3292 8d0197f0e561539f73053b6a0f775103 197 Gene3D G3DSA:2.40.160.20 29 197 5.6E-18 T 15-10-2018 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 79 6.5E-18 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 Pfam PF01380 SIS domain 126 249 5.4E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 SUPERFAMILY SSF53697 96 264 4.9E-36 T 15-10-2018 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 Gene3D G3DSA:3.40.50.10490 94 273 2.5E-38 T 15-10-2018 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 SUPERFAMILY SSF46689 5 79 8.96E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0311 2b8067646fd2f1a288f0aa0f73eabeca 287 Gene3D G3DSA:1.10.10.10 3 82 1.9E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0024 d63f29a9befd11b7ca0bc69d7d4f24f6 203 Gene3D G3DSA:3.40.50.11310 3 194 3.2E-53 T 15-10-2018 IPR038058 PhnH-like superfamily VIBNI_A0024 d63f29a9befd11b7ca0bc69d7d4f24f6 203 PIRSF PIRSF020680 1 198 3.7E-54 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 VIBNI_A0024 d63f29a9befd11b7ca0bc69d7d4f24f6 203 SUPERFAMILY SSF159709 13 193 1.44E-47 T 15-10-2018 IPR038058 PhnH-like superfamily VIBNI_A0024 d63f29a9befd11b7ca0bc69d7d4f24f6 203 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 191 7.0E-51 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 VIBNI_A0024 d63f29a9befd11b7ca0bc69d7d4f24f6 203 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 3.1E-56 T 15-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 412 2.3E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Gene3D G3DSA:3.40.50.2300 549 683 5.5E-34 T 15-10-2018 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Gene3D G3DSA:1.10.287.130 173 257 3.3E-6 T 15-10-2018 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 SUPERFAMILY SSF55874 252 413 8.38E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 SMART SM00387 306 414 1.5E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 SUPERFAMILY SSF52172 562 682 5.12E-33 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 SMART SM00448 563 679 7.0E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 SUPERFAMILY SSF47384 168 243 2.35E-7 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Gene3D G3DSA:3.30.565.10 258 412 7.5E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Pfam PF00072 Response regulator receiver domain 566 679 1.1E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 220 1.3E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 1.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 1.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 1.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1205 60abbc811fca9f23cc9a95136c0816c5 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 1.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 SUPERFAMILY SSF52540 4 166 8.66E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Gene3D G3DSA:3.40.50.300 2 160 7.3E-44 T 15-10-2018 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 461 1.2E-23 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Pfam PF01926 50S ribosome-binding GTPase 209 326 2.1E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.1E-27 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Gene3D G3DSA:3.40.50.300 201 379 1.4E-49 T 15-10-2018 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Gene3D G3DSA:3.30.300.20 382 464 1.2E-18 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 371 4.1E-25 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 5.1E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 Hamap MF_00195 GTPase Der [der]. 2 465 39.021 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 SUPERFAMILY SSF52540 179 468 2.04E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 9.0E-179 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 PIRSF PIRSF006485 1 470 2.3E-180 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2771 53fec6345c210b1c86e9b5ad49a2ebc6 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Gene3D G3DSA:3.30.310.50 370 445 3.4E-24 T 15-10-2018 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Gene3D G3DSA:3.40.120.10 3 154 4.7E-49 T 15-10-2018 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 5.3E-19 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 SUPERFAMILY SSF55957 357 443 2.49E-20 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 1.4E-45 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.014 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 441 2.1E-12 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 SUPERFAMILY SSF53738 258 365 5.89E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 367 1.1E-30 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Gene3D G3DSA:3.40.120.10 174 362 4.3E-62 T 15-10-2018 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 SUPERFAMILY SSF53738 2 181 1.61E-48 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 3.1E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 SUPERFAMILY SSF53738 156 256 7.06E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 6.4E-203 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2801 703ea32aba506b0f2f0e483d41f5ef78 445 Gene3D G3DSA:3.40.120.10 257 339 4.3E-62 T 15-10-2018 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.7E-37 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Gene3D G3DSA:1.10.10.10 452 528 2.6E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.029 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF04545 Sigma-70, region 4 547 600 1.8E-19 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.5E-120 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 1.5E-29 T 15-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 3.0E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 3.0E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 3.0E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 3.0E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 3.0E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 SUPERFAMILY SSF88659 509 611 1.36E-25 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Gene3D G3DSA:1.10.601.10 111 448 3.3E-142 T 15-10-2018 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.8E-12 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF04539 Sigma-70 region 3 458 533 1.3E-28 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Gene3D G3DSA:1.10.10.10 529 613 7.0E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF04546 Sigma-70, non-essential region 137 348 1.5E-65 T 15-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 SUPERFAMILY SSF88659 452 525 2.2E-20 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Gene3D G3DSA:1.10.220.120 1 64 1.5E-30 T 15-10-2018 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 SUPERFAMILY SSF88946 113 446 5.49E-100 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A2870 5eca3cf87a5e55867d51cac2238c2f70 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 Gene3D G3DSA:1.10.10.10 2 68 3.8E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 Gene3D G3DSA:3.40.640.10 140 359 3.7E-96 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 Pfam PF00155 Aminotransferase class I and II 142 459 3.1E-30 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 SUPERFAMILY SSF46785 3 70 3.2E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 SUPERFAMILY SSF53383 93 465 2.72E-90 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 Gene3D G3DSA:3.90.1150.10 98 464 3.7E-96 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 SMART SM00345 7 66 4.5E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0920 fc82d7d2e070cd7fd252a57aa6e9abb6 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 2.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0308 4186671f1cab8fc5d7a4183860d72b82 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 322 5.0E-77 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A0308 4186671f1cab8fc5d7a4183860d72b82 350 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 278 3.8E-64 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A0308 4186671f1cab8fc5d7a4183860d72b82 350 PIRSF PIRSF006470 1 336 5.0E-81 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A0308 4186671f1cab8fc5d7a4183860d72b82 350 Gene3D G3DSA:3.40.190.170 26 349 1.4E-91 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 SUPERFAMILY SSF54373 288 471 1.28E-46 T 15-10-2018 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 Gene3D G3DSA:3.30.560.10 41 466 6.8E-156 T 15-10-2018 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 Pfam PF05199 GMC oxidoreductase 385 522 5.3E-40 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 SUPERFAMILY SSF51905 2 530 6.48E-77 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 252 266 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 Pfam PF00732 GMC oxidoreductase 3 293 6.1E-77 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 PIRSF PIRSF000137 2 536 3.2E-135 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1287 21264ca575144575e64e0d2560cb7f2c 536 Gene3D G3DSA:3.50.50.60 3 523 6.8E-156 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2276 a3f2ff9d33a63f88cb41350a1e4e4718 248 Gene3D G3DSA:2.40.70.10 107 237 8.6E-42 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A2276 a3f2ff9d33a63f88cb41350a1e4e4718 248 SUPERFAMILY SSF50630 110 244 2.81E-40 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A2276 a3f2ff9d33a63f88cb41350a1e4e4718 248 Pfam PF05618 Putative ATP-dependant zinc protease 110 245 1.1E-46 T 15-10-2018 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 SUPERFAMILY SSF64518 1 376 9.42E-96 T 15-10-2018 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Gene3D G3DSA:1.20.1330.10 198 328 2.1E-17 T 15-10-2018 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-41 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 PRINTS PR00207 Flagellin signature 37 54 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 PRINTS PR00207 Flagellin signature 76 95 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 PRINTS PR00207 Flagellin signature 111 134 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Pfam PF07196 Flagellin hook IN motif 194 249 6.4E-10 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Gene3D G3DSA:1.20.58.1830 5 33 9.7E-71 T 15-10-2018 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Gene3D G3DSA:1.10.8.410 329 376 1.1E-19 T 15-10-2018 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 4.9E-25 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0708 07563c72b39b28f6324ada0785297e3d 377 Gene3D G3DSA:1.20.1330.10 45 170 9.7E-71 T 15-10-2018 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 Gene3D G3DSA:3.40.1090.10 22 130 6.8E-29 T 15-10-2018 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 Gene3D G3DSA:3.40.1090.10 146 288 6.1E-17 T 15-10-2018 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 Pfam PF01734 Patatin-like phospholipase 42 232 1.2E-26 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 Pfam PF07244 Surface antigen variable number repeat 352 422 4.0E-7 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 Gene3D G3DSA:3.10.20.310 348 423 1.2E-9 T 15-10-2018 VIBNI_A2843 8fb7f534681b6615fcbcbabf9fbfce0b 767 SUPERFAMILY SSF52151 36 334 3.14E-57 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 6.3E-111 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 Gene3D G3DSA:1.10.1200.80 251 322 1.7E-9 T 15-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 Gene3D G3DSA:3.20.20.70 6 248 3.7E-79 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 5.5E-133 T 15-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 SUPERFAMILY SSF51395 10 319 3.3E-90 T 15-10-2018 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 PIRSF PIRSF006621 1 321 2.5E-102 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A3306 c4eae173ad65cdc76a219acf5b5eaaea 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.052 T 15-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 Pfam PF00202 Aminotransferase class-III 22 416 1.5E-124 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 Gene3D G3DSA:3.90.1150.10 5 414 4.4E-148 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 PIRSF PIRSF000521 26 129 0.0043 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 PIRSF PIRSF000521 125 421 7.1E-43 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 271 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 SUPERFAMILY SSF53383 19 418 1.81E-125 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 Gene3D G3DSA:3.40.640.10 58 317 4.4E-148 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0745 816439645371e5d769f34af4c66b445d 424 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 1.1E-161 T 15-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 6.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 6.5E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 48 175 5.7E-18 T 15-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 Gene3D G3DSA:1.10.10.60 229 333 5.0E-23 T 15-10-2018 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 SMART SM00342 249 331 4.4E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 Pfam PF12833 Helix-turn-helix domain 256 332 4.7E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2102 7a493a46077a77e458567d5ec3b2c954 337 SUPERFAMILY SSF46689 284 332 2.55E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0377 b8e7831490beefcae3f59369dab471a9 122 Pfam PF07238 PilZ domain 3 101 4.1E-12 T 15-10-2018 IPR009875 PilZ domain GO:0035438 VIBNI_A0377 b8e7831490beefcae3f59369dab471a9 122 Gene3D G3DSA:2.40.10.220 1 120 7.2E-33 T 15-10-2018 VIBNI_A0377 b8e7831490beefcae3f59369dab471a9 122 PIRSF PIRSF028141 1 121 3.5E-41 T 15-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VIBNI_A0377 b8e7831490beefcae3f59369dab471a9 122 SUPERFAMILY SSF141371 1 119 8.63E-32 T 15-10-2018 VIBNI_A1034 c0e94102aa9e723916d9a7b569737582 324 Gene3D G3DSA:3.40.190.10 119 257 3.5E-109 T 15-10-2018 VIBNI_A1034 c0e94102aa9e723916d9a7b569737582 324 Pfam PF16868 NMT1-like family 32 321 1.6E-97 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_A1034 c0e94102aa9e723916d9a7b569737582 324 Gene3D G3DSA:3.40.190.10 32 321 3.5E-109 T 15-10-2018 VIBNI_A1034 c0e94102aa9e723916d9a7b569737582 324 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 321 6.9E-116 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_A1034 c0e94102aa9e723916d9a7b569737582 324 SUPERFAMILY SSF53850 28 323 1.06E-89 T 15-10-2018 VIBNI_B1904 bc3ef8fa6881eb931168826e5c375d1b 447 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 435 3.6E-105 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B1904 bc3ef8fa6881eb931168826e5c375d1b 447 PIRSF PIRSF006066 4 446 9.7E-123 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B1904 bc3ef8fa6881eb931168826e5c375d1b 447 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 441 1.8E-114 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Gene3D G3DSA:2.60.34.10 382 522 1.5E-64 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Pfam PF00012 Hsp70 protein 4 601 3.4E-261 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Gene3D G3DSA:3.90.640.10 228 315 5.0E-165 T 15-10-2018 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Gene3D G3DSA:3.30.420.40 5 378 5.0E-165 T 15-10-2018 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 SUPERFAMILY SSF100934 534 608 5.49E-6 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Gene3D G3DSA:1.20.1270.10 523 602 7.6E-27 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 SUPERFAMILY SSF53067 186 381 1.94E-65 T 15-10-2018 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 SUPERFAMILY SSF100920 383 539 1.29E-59 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.3E-78 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 SUPERFAMILY SSF53067 1 182 4.53E-64 T 15-10-2018 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.07 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 Gene3D G3DSA:3.30.420.40 179 365 5.0E-165 T 15-10-2018 VIBNI_A2723 97bccf84084fa4a9a272983d3e9243d3 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.2E-284 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SUPERFAMILY SSF81767 227 369 7.72E-43 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SMART SM00958 228 359 1.7E-80 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Pfam PF02810 SEC-C motif 888 906 3.3E-10 T 15-10-2018 IPR004027 SEC-C motif VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Gene3D G3DSA:3.40.50.300 22 416 4.3E-175 T 15-10-2018 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Gene3D G3DSA:3.90.1440.10 229 369 4.3E-175 T 15-10-2018 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 ProSitePatterns PS01312 SecA family signature. 501 516 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Pfam PF07517 SecA DEAD-like domain 7 403 8.1E-133 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SMART SM00957 6 403 0.0 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SUPERFAMILY SSF52540 5 416 4.06E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Gene3D G3DSA:3.40.50.300 418 620 7.3E-88 T 15-10-2018 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SUPERFAMILY SSF81886 620 896 2.62E-83 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.995 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Gene3D G3DSA:1.10.3060.10 621 833 1.3E-75 T 15-10-2018 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 101 115 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 117 127 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 170 190 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 340 362 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 63 87 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 377 394 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 PRINTS PR00906 SecA protein signature 414 427 3.0E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 SUPERFAMILY SSF52540 418 610 1.35E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Pfam PF01043 SecA preprotein cross-linking domain 232 359 2.9E-38 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VIBNI_A0237 b91bba032a694c05ba3331cfc560fa67 907 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.8E-65 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Gene3D G3DSA:3.30.470.20 191 329 9.6E-63 T 15-10-2018 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Gene3D G3DSA:3.30.1490.20 121 190 5.2E-29 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.9E-36 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Gene3D G3DSA:3.40.50.20 2 95 3.0E-38 T 15-10-2018 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Gene3D G3DSA:3.90.600.10 330 429 9.2E-35 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 SMART SM01210 330 423 2.6E-56 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.421 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 SUPERFAMILY SSF56059 104 322 1.7E-69 T 15-10-2018 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 SUPERFAMILY SSF52440 1 103 5.61E-37 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.2E-84 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 SMART SM01209 103 296 2.8E-144 T 15-10-2018 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.6E-29 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.6E-189 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A3313 72fda6a733533960bc5b99de93355311 429 SUPERFAMILY SSF51246 329 424 2.04E-33 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VIBNI_B0965 d1fea35ed5b5ab4272c49b6ae7c5b016 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 438 7.7E-87 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0965 d1fea35ed5b5ab4272c49b6ae7c5b016 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 17 435 3.0E-80 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0965 d1fea35ed5b5ab4272c49b6ae7c5b016 440 PIRSF PIRSF006066 12 440 5.6E-72 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 3.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 3.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Gene3D G3DSA:3.30.565.10 302 451 1.5E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 SUPERFAMILY SSF55874 288 450 2.49E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 32 160 8.1E-36 T 15-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 SMART SM00387 342 451 3.8E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 296 6.0E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 SUPERFAMILY SSF47384 222 297 1.22E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Gene3D G3DSA:1.10.287.130 186 300 1.2E-33 T 15-10-2018 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Gene3D G3DSA:3.30.450.210 27 149 3.9E-38 T 15-10-2018 IPR038515 CpxA, periplasmic domain superfamily VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 SMART SM00304 182 235 3.1E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 449 1.2E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 Pfam PF00672 HAMP domain 183 227 2.6E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3258 1e5b774c4d7dade53718b4e2b4b93a91 451 SMART SM00388 236 298 5.6E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 SMART SM00862 160 234 1.4E-12 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 SMART SM00448 5 116 7.5E-42 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 Gene3D G3DSA:1.10.10.10 125 239 7.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 SUPERFAMILY SSF46894 138 235 2.38E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 234 8.7E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 Gene3D G3DSA:3.40.50.2300 1 124 3.2E-38 T 15-10-2018 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2449 e6758fe551ed3318dce41487aca793c2 242 SUPERFAMILY SSF52172 3 129 3.13E-42 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1666 4bbfb71deaf47bf84767d8bdcd413490 380 Pfam PF13433 Periplasmic binding protein domain 5 354 7.9E-80 T 15-10-2018 VIBNI_B1666 4bbfb71deaf47bf84767d8bdcd413490 380 SUPERFAMILY SSF53822 3 341 9.42E-52 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1666 4bbfb71deaf47bf84767d8bdcd413490 380 Gene3D G3DSA:3.40.50.2300 117 335 2.7E-88 T 15-10-2018 VIBNI_B1666 4bbfb71deaf47bf84767d8bdcd413490 380 Gene3D G3DSA:3.40.50.2300 6 325 2.7E-88 T 15-10-2018 VIBNI_A1362 6b23db27be21d7b7a8d556afe8b9103f 76 Pfam PF06667 Phage shock protein B 3 74 7.5E-35 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VIBNI_A1362 6b23db27be21d7b7a8d556afe8b9103f 76 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.3E-34 T 15-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VIBNI_A0134 0b867d56d527f696632ff239793c9a63 248 SUPERFAMILY SSF64167 1 245 2.62E-86 T 15-10-2018 VIBNI_A0134 0b867d56d527f696632ff239793c9a63 248 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 40.561 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VIBNI_A0134 0b867d56d527f696632ff239793c9a63 248 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.6E-70 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VIBNI_A0134 0b867d56d527f696632ff239793c9a63 248 Gene3D G3DSA:3.40.1210.10 1 248 1.6E-96 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VIBNI_A0134 0b867d56d527f696632ff239793c9a63 248 Pfam PF01975 Survival protein SurE 3 181 1.8E-61 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 9.1E-202 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.6E-49 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.6E-49 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.6E-49 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.6E-49 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.6E-49 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 SUPERFAMILY SSF51735 3 194 2.1E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 2.9E-113 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 SUPERFAMILY SSF55347 181 489 2.29E-112 T 15-10-2018 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.679 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 15-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 PIRSF PIRSF000110 3 489 1.4E-175 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 3.7E-64 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 Gene3D G3DSA:3.40.50.720 4 179 1.4E-59 T 15-10-2018 VIBNI_B1828 e65775c2d1e39360dac22ffcfeb26802 500 Gene3D G3DSA:3.30.360.10 180 488 2.5E-123 T 15-10-2018 VIBNI_B0555 13f0c931019be9fdc16aa1a621d98ed8 155 SUPERFAMILY SSF55729 44 148 2.3E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0555 13f0c931019be9fdc16aa1a621d98ed8 155 Pfam PF00583 Acetyltransferase (GNAT) family 55 142 2.8E-10 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0555 13f0c931019be9fdc16aa1a621d98ed8 155 Gene3D G3DSA:3.40.630.30 2 152 3.7E-35 T 15-10-2018 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Pfam PF00009 Elongation factor Tu GTP binding domain 405 561 4.7E-32 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Gene3D G3DSA:3.40.50.300 398 572 3.5E-69 T 15-10-2018 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 SUPERFAMILY SSF52540 400 566 7.52E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 ProSitePatterns PS01176 Initiation factor 2 signature. 852 874 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Gene3D G3DSA:2.40.30.10 803 900 1.0E-34 T 15-10-2018 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Gene3D G3DSA:3.40.50.10050 696 802 1.8E-37 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 899 17.585 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 SUPERFAMILY SSF52156 679 808 2.62E-38 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.2E-16 T 15-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 405 560 4.6E-33 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 SUPERFAMILY SSF50447 803 899 1.16E-34 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 319 901 2.3E-287 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 326 376 1.0E-14 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 4.8E-9 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 SUPERFAMILY SSF46955 3 50 2.56E-12 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Pfam PF11987 Translation-initiation factor 2 686 791 4.1E-37 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Gene3D G3DSA:2.40.30.10 573 691 2.5E-40 T 15-10-2018 VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 SUPERFAMILY SSF50447 574 656 1.64E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A2797 c17e9a9fbff0c52b8ccc013dbab6dc3a 902 Gene3D G3DSA:3.30.56.50 2 50 1.2E-22 T 15-10-2018 VIBNI_B0530 c16a506c0755d6c0715c034718193db1 423 Pfam PF13416 Bacterial extracellular solute-binding protein 46 358 1.1E-26 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0530 c16a506c0755d6c0715c034718193db1 423 Gene3D G3DSA:3.40.190.10 49 369 1.7E-86 T 15-10-2018 VIBNI_B0530 c16a506c0755d6c0715c034718193db1 423 SUPERFAMILY SSF53850 21 417 4.29E-71 T 15-10-2018 VIBNI_B0530 c16a506c0755d6c0715c034718193db1 423 Gene3D G3DSA:3.40.190.10 137 411 1.7E-86 T 15-10-2018 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 348 356 - T 15-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 Gene3D G3DSA:2.40.180.10 20 502 7.2E-201 T 15-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PIRSF PIRSF038928 14 495 5.2E-183 T 15-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 SUPERFAMILY SSF56634 14 495 4.06E-189 T 15-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 Pfam PF06628 Catalase-related immune-responsive 430 488 4.4E-19 T 15-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 140 158 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 303 330 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 121 138 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 37 60 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 100 118 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 PRINTS PR00067 Catalase signature 335 361 1.1E-68 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 Pfam PF00199 Catalase 24 400 5.5E-166 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 SMART SM01060 24 405 1.7E-235 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0575 c9215156dea37411b778e41a60e08285 502 ProSitePatterns PS00438 Catalase proximal active site signature. 60 76 - T 15-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 Gene3D G3DSA:3.40.50.12740 2 208 7.1E-52 T 15-10-2018 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 SUPERFAMILY SSF46894 142 208 1.36E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 SUPERFAMILY SSF52172 1 129 1.01E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 Pfam PF00072 Response regulator receiver domain 5 114 1.6E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 1.4E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 SMART SM00448 2 114 6.4E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 6.2E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 6.2E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 6.2E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0309 c151d3f96f63fb67d3abea5f17f60d19 209 SMART SM00421 145 202 1.1E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 508 1.4E-25 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.4E-25 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 311 6.5E-81 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Gene3D G3DSA:3.40.50.1100 20 322 1.4E-132 T 15-10-2018 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 9.9E-246 T 15-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Gene3D G3DSA:3.40.1020.10 333 509 8.4E-72 T 15-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 SUPERFAMILY SSF55021 332 418 2.52E-27 T 15-10-2018 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 Gene3D G3DSA:3.40.50.1100 56 152 1.4E-132 T 15-10-2018 VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 SUPERFAMILY SSF53686 9 360 3.54E-105 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A3854 9748a62e1e47cb0b414f8c2f67fb3f7e 509 SUPERFAMILY SSF55021 415 508 1.03E-25 T 15-10-2018 VIBNI_A2606 fde763f331b1242d97100fff06ba3136 181 SUPERFAMILY SSF56300 1 162 2.34E-37 T 15-10-2018 VIBNI_A2606 fde763f331b1242d97100fff06ba3136 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 162 7.6E-25 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VIBNI_A2606 fde763f331b1242d97100fff06ba3136 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 163 1.2E-28 T 15-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VIBNI_A2606 fde763f331b1242d97100fff06ba3136 181 Gene3D G3DSA:3.60.21.10 1 179 6.3E-62 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A2606 fde763f331b1242d97100fff06ba3136 181 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 15-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 Gene3D G3DSA:1.10.10.10 3 87 2.6E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.6E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 Gene3D G3DSA:3.40.190.10 92 276 3.8E-36 T 15-10-2018 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 SUPERFAMILY SSF53850 85 286 1.86E-38 T 15-10-2018 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 Gene3D G3DSA:3.40.190.10 165 268 3.8E-36 T 15-10-2018 VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 Pfam PF03466 LysR substrate binding domain 90 283 6.9E-43 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1189 80e095e24318662986186d0b783edbe9 301 SUPERFAMILY SSF46785 2 111 4.54E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 Pfam PF00563 EAL domain 140 372 4.6E-54 T 15-10-2018 IPR001633 EAL domain VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 SUPERFAMILY SSF52172 3 136 7.97E-23 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 Gene3D G3DSA:3.40.50.2300 2 131 3.2E-25 T 15-10-2018 VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 Gene3D G3DSA:3.20.20.450 137 393 4.2E-67 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 SMART SM00448 3 120 2.0E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 SUPERFAMILY SSF141868 140 385 4.18E-65 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 Pfam PF00072 Response regulator receiver domain 5 119 7.0E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2045 e234bc08c0b81eb44070b08ed587940f 395 SMART SM00052 134 377 7.6E-59 T 15-10-2018 IPR001633 EAL domain VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 Gene3D G3DSA:3.90.180.10 8 315 2.5E-78 T 15-10-2018 VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 SUPERFAMILY SSF51735 125 291 2.03E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 Pfam PF13602 Zinc-binding dehydrogenase 192 316 2.5E-17 T 15-10-2018 VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 94 6.2E-9 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 SMART SM00829 10 316 1.3E-11 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 SUPERFAMILY SSF50129 1 155 5.35E-30 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0023 771cdc45d80acf7b0cc75a25d7a33459 319 Gene3D G3DSA:3.40.50.720 133 267 2.5E-78 T 15-10-2018 VIBNI_A3188 636389af64a91184d6e86b32b1a74369 132 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 7 132 2.0E-55 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VIBNI_A3188 636389af64a91184d6e86b32b1a74369 132 SUPERFAMILY SSF75169 7 132 5.89E-39 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_A3188 636389af64a91184d6e86b32b1a74369 132 Pfam PF02635 DsrE/DsrF-like family 6 132 4.6E-29 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VIBNI_A3188 636389af64a91184d6e86b32b1a74369 132 Gene3D G3DSA:3.40.1260.10 1 132 3.5E-53 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 Gene3D G3DSA:2.40.50.940 222 345 5.6E-30 T 15-10-2018 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 Pfam PF00005 ABC transporter 19 161 1.2E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 Gene3D G3DSA:2.40.50.140 279 336 5.6E-30 T 15-10-2018 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 Gene3D G3DSA:3.40.50.300 3 221 1.6E-64 T 15-10-2018 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 Pfam PF08402 TOBE domain 273 344 1.0E-8 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 SUPERFAMILY SSF50331 236 350 1.19E-23 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 SMART SM00382 28 211 2.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0526 ef643122f270c63804a2d86353125fc0 357 SUPERFAMILY SSF52540 4 242 2.94E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1587 77f84cf77f53da3b3e7f51e2586b5357 119 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VIBNI_B1587 77f84cf77f53da3b3e7f51e2586b5357 119 Gene3D G3DSA:1.10.3830.10 4 119 3.0E-37 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VIBNI_B1587 77f84cf77f53da3b3e7f51e2586b5357 119 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.7E-34 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 SUPERFAMILY SSF158544 103 215 7.59E-30 T 15-10-2018 IPR038072 GspK, central domain superfamily VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 Pfam PF03934 Type II secretion system (T2SS), protein K 32 320 1.9E-82 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 Gene3D G3DSA:3.30.1300.30 45 311 1.4E-87 T 15-10-2018 VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 SUPERFAMILY SSF54523 38 327 2.04E-35 T 15-10-2018 VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 PIRSF PIRSF002786 3 330 1.3E-60 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 Gene3D G3DSA:1.10.40.60 218 287 1.4E-87 T 15-10-2018 IPR038072 GspK, central domain superfamily VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 Gene3D G3DSA:1.10.40.60 101 217 1.4E-87 T 15-10-2018 IPR038072 GspK, central domain superfamily VIBNI_A3372 5b9a1416f9d94be9495d18d9e46f38a4 338 SUPERFAMILY SSF158544 217 284 4.97E-17 T 15-10-2018 IPR038072 GspK, central domain superfamily VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 5.9E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 5.4E-40 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Gene3D G3DSA:3.10.20.30 48 362 2.2E-151 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 PIRSF PIRSF006641 1 363 6.9E-159 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.425 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Gene3D G3DSA:3.40.50.300 4 278 2.2E-151 T 15-10-2018 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 SUPERFAMILY SSF52540 3 301 1.02E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 SUPERFAMILY SSF81271 279 360 3.05E-37 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.2E-169 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VIBNI_A2686 c09ebda52d37ac1b9a61927e1722b596 363 Gene3D G3DSA:1.10.150.300 120 200 2.2E-151 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Pfam PF13426 PAS domain 287 390 1.3E-17 T 15-10-2018 IPR000014 PAS domain VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Pfam PF00512 His Kinase A (phospho-acceptor) domain 411 475 3.1E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SUPERFAMILY SSF55785 283 390 5.41E-23 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SUPERFAMILY SSF47226 807 920 1.02E-10 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SUPERFAMILY SSF52172 660 789 2.56E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SUPERFAMILY SSF47384 394 477 9.61E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 398 4.5E-20 T 15-10-2018 IPR000014 PAS domain VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SMART SM00388 411 476 5.7E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SUPERFAMILY SSF55874 465 637 4.71E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Gene3D G3DSA:3.30.450.20 261 383 4.4E-29 T 15-10-2018 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SMART SM00387 523 639 2.1E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 617 2.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 592 2.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 636 2.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 578 2.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 638 6.4E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SMART SM00448 661 773 4.9E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Pfam PF00072 Response regulator receiver domain 663 771 2.4E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SMART SM00086 349 391 4.7E-6 T 15-10-2018 IPR001610 PAC motif VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Gene3D G3DSA:3.30.565.10 476 643 1.1E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Gene3D G3DSA:1.10.287.130 384 474 9.5E-26 T 15-10-2018 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Gene3D G3DSA:3.40.50.2300 647 785 6.6E-32 T 15-10-2018 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 Gene3D G3DSA:1.20.120.160 800 923 3.2E-7 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2092 9a1e4dae006482ad30232be67e459bb6 931 SMART SM00091 276 343 6.3E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_B0541 3f57a2de2c99566b0aefd3c5503182bb 141 Gene3D G3DSA:1.10.720.30 20 79 2.2E-26 T 15-10-2018 IPR036361 SAP domain superfamily VIBNI_B0541 3f57a2de2c99566b0aefd3c5503182bb 141 Pfam PF09905 DNA-binding protein VF530 12 74 6.1E-31 T 15-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 Gene3D G3DSA:2.40.50.100 44 242 3.6E-32 T 15-10-2018 VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 Pfam PF13533 Biotin-lipoyl like 47 88 7.6E-11 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 Pfam PF13437 HlyD family secretion protein 208 284 1.3E-5 T 15-10-2018 VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 Gene3D G3DSA:2.40.30.170 36 323 3.6E-32 T 15-10-2018 VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 SUPERFAMILY SSF111369 37 121 3.14E-7 T 15-10-2018 VIBNI_A1850 e6518ab0db16472240ada3933bdd6443 327 Gene3D G3DSA:1.10.287.470 78 207 3.6E-32 T 15-10-2018 VIBNI_B1399 50540d5690fe7c7e24cb299008315e87 241 Gene3D G3DSA:3.20.20.70 4 229 2.9E-79 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B1399 50540d5690fe7c7e24cb299008315e87 241 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 13 227 33.531 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VIBNI_B1399 50540d5690fe7c7e24cb299008315e87 241 SUPERFAMILY SSF51366 13 224 7.77E-47 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_B1399 50540d5690fe7c7e24cb299008315e87 241 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 39 226 4.7E-71 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 2.7E-128 T 15-10-2018 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 438 4.0E-30 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Gene3D G3DSA:3.40.1350.30 135 271 2.0E-115 T 15-10-2018 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Gene3D G3DSA:2.40.50.140 1 88 6.3E-29 T 15-10-2018 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.22 T 15-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Pfam PF01938 TRAM domain 22 67 1.9E-5 T 15-10-2018 IPR002792 TRAM domain VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 SUPERFAMILY SSF50249 18 74 6.28E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 SUPERFAMILY SSF53335 77 438 1.43E-79 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0125 236fc12dc7bc8286e828096a4ec89f17 439 Gene3D G3DSA:3.40.50.150 89 433 2.0E-115 T 15-10-2018 VIBNI_B2029 65a628e8bbc4ca57c144da47b7b77aae 153 Gene3D G3DSA:1.10.10.10 17 147 1.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2029 65a628e8bbc4ca57c144da47b7b77aae 153 SUPERFAMILY SSF46785 18 144 1.78E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2029 65a628e8bbc4ca57c144da47b7b77aae 153 Pfam PF12802 MarR family 40 94 9.4E-10 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B2029 65a628e8bbc4ca57c144da47b7b77aae 153 SMART SM00347 32 132 9.8E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A1279 f76ba2798c8942b5418a1f62de8ae124 206 Pfam PF01300 Telomere recombination 23 198 1.4E-45 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 VIBNI_A1279 f76ba2798c8942b5418a1f62de8ae124 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 1.8E-70 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 VIBNI_A1279 f76ba2798c8942b5418a1f62de8ae124 206 SUPERFAMILY SSF55821 1 203 1.19E-64 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VIBNI_A1279 f76ba2798c8942b5418a1f62de8ae124 206 Gene3D G3DSA:3.90.870.10 1 206 1.3E-68 T 15-10-2018 VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 SUPERFAMILY SSF81345 347 654 1.16E-60 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 SUPERFAMILY SSF81345 24 323 2.09E-54 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 Gene3D G3DSA:1.10.3470.10 338 656 1.5E-67 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 Pfam PF01032 FecCD transport family 355 654 1.1E-64 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 Pfam PF01032 FecCD transport family 15 323 8.8E-64 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0827 8710b05d8fa660f2d9cdd8798adc2a02 659 Gene3D G3DSA:1.10.3470.10 1 328 4.2E-62 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:3.40.50.880 983 1297 6.3E-141 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF56042 432 615 1.79E-53 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF109736 155 220 4.71E-22 T 15-10-2018 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:3.90.650.10 420 606 9.3E-60 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF55326 221 428 1.6E-65 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF55326 619 816 2.07E-69 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:3.90.650.10 810 982 1.3E-31 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 2.1E-106 T 15-10-2018 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF82697 1 150 2.09E-50 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SMART SM01211 1041 1296 1.9E-158 T 15-10-2018 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:1.10.8.750 153 213 1.4E-28 T 15-10-2018 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF52317 1037 1296 8.37E-99 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 968 4.8E-15 T 15-10-2018 IPR010918 PurM-like, C-terminal domain VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 1.2E-28 T 15-10-2018 IPR010918 PurM-like, C-terminal domain VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 SUPERFAMILY SSF56042 825 1035 2.54E-56 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:3.30.1330.10 214 419 1.9E-41 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.373 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A0642 6bb91b5ea8a0a911c49967dd319da232 1297 Gene3D G3DSA:3.30.1330.10 614 809 4.6E-26 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 SMART SM00382 500 684 9.6E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 SUPERFAMILY SSF52540 469 688 3.48E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Gene3D G3DSA:3.40.50.300 461 693 1.3E-72 T 15-10-2018 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Gene3D G3DSA:3.90.70.10 1 137 1.9E-37 T 15-10-2018 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 SUPERFAMILY SSF90123 145 440 4.32E-56 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Gene3D G3DSA:1.20.1560.10 141 460 1.4E-64 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Pfam PF00005 ABC transporter 492 640 2.3E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Pfam PF00664 ABC transporter transmembrane region 159 427 5.5E-37 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1807 cbe8af5f0a9b0553bebcc4f1a6f4928a 694 Pfam PF03412 Peptidase C39 family 2 129 2.9E-35 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SMART SM00091 163 229 4.0E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:3.30.450.20 150 286 5.8E-24 T 15-10-2018 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF01627 Hpt domain 907 952 9.1E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF47226 798 966 3.4E-18 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF55874 354 523 1.19E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF13426 PAS domain 174 279 1.0E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:3.40.50.2300 534 670 6.5E-29 T 15-10-2018 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:3.40.50.2300 682 826 2.5E-41 T 15-10-2018 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF52172 549 673 6.26E-27 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 524 3.6E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SMART SM00388 300 365 1.9E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF55785 175 287 1.82E-15 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF47384 285 366 9.22E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:1.20.120.160 865 975 8.4E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 287 1.2E-19 T 15-10-2018 IPR000014 PAS domain VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF00072 Response regulator receiver domain 699 815 1.9E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF00072 Response regulator receiver domain 552 667 4.0E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:3.30.565.10 366 532 7.5E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Gene3D G3DSA:1.10.287.130 287 365 1.9E-25 T 15-10-2018 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SMART SM00387 412 528 5.7E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SMART SM00448 697 815 3.8E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SMART SM00448 550 669 8.4E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 SUPERFAMILY SSF52172 693 820 4.84E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 365 3.8E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1566 d14638e174fc445416e3e3a10bc6dd8c 1063 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 2.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.004 T 15-10-2018 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.368 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-8 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 SUPERFAMILY SSF57840 1 41 1.96E-14 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0603 b74c7288c363c2a8d402f33676455c05 47 Pfam PF00444 Ribosomal protein L36 1 41 5.4E-18 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Gene3D G3DSA:3.30.300.30 436 548 7.1E-12 T 15-10-2018 VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Gene3D G3DSA:1.10.1200.10 551 633 2.7E-13 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 SUPERFAMILY SSF47336 556 628 3.14E-11 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Pfam PF00550 Phosphopantetheine attachment site 564 627 3.6E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 SUPERFAMILY SSF53474 851 973 1.68E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Pfam PF00501 AMP-binding enzyme 29 441 1.0E-52 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 SUPERFAMILY SSF53474 644 828 8.6E-29 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 SUPERFAMILY SSF56801 18 574 4.06E-77 T 15-10-2018 VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Pfam PF00975 Thioesterase domain 660 821 1.9E-19 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_A1771 77c4be6eec6e68050ec1d2c4080b2087 985 Gene3D G3DSA:3.40.50.12780 14 435 5.3E-66 T 15-10-2018 VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 Gene3D G3DSA:2.30.210.20 5 63 9.8E-27 T 15-10-2018 VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 222 1.4E-70 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 7.7E-69 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 241 86.228 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 SUPERFAMILY SSF55729 5 229 4.34E-86 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2125 f05345961b2ebaea77ae899d0ba667c2 241 Gene3D G3DSA:3.40.630.70 64 240 1.3E-61 T 15-10-2018 VIBNI_A2186 ecae136cb304262e2126c1ef0feebd7f 155 Gene3D G3DSA:3.30.300.20 1 152 4.6E-45 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A2186 ecae136cb304262e2126c1ef0feebd7f 155 SUPERFAMILY SSF82784 1 151 7.2E-44 T 15-10-2018 IPR036102 OsmC/Ohr superfamily VIBNI_A2186 ecae136cb304262e2126c1ef0feebd7f 155 Pfam PF02566 OsmC-like protein 52 152 8.9E-16 T 15-10-2018 IPR003718 OsmC/Ohr family VIBNI_B0883 f03ee29dbe12df492c60e6cb6799547d 252 Pfam PF00005 ABC transporter 18 164 7.0E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0883 f03ee29dbe12df492c60e6cb6799547d 252 SMART SM00382 26 213 1.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0883 f03ee29dbe12df492c60e6cb6799547d 252 SUPERFAMILY SSF52540 2 226 3.27E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0883 f03ee29dbe12df492c60e6cb6799547d 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0883 f03ee29dbe12df492c60e6cb6799547d 252 Gene3D G3DSA:3.40.50.300 1 251 1.5E-63 T 15-10-2018 VIBNI_A0559 eab3b9d98aa2c72e0c100ed835207b90 227 Gene3D G3DSA:1.10.10.1320 1 114 2.5E-11 T 15-10-2018 VIBNI_A0559 eab3b9d98aa2c72e0c100ed835207b90 227 Pfam PF12973 ChrR Cupin-like domain 132 201 4.9E-15 T 15-10-2018 IPR025979 ChrR-like cupin domain VIBNI_A0559 eab3b9d98aa2c72e0c100ed835207b90 227 SUPERFAMILY SSF51182 128 214 2.76E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A0559 eab3b9d98aa2c72e0c100ed835207b90 227 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 223 1.1E-69 T 15-10-2018 IPR012807 Anti-sigma factor ChrR, putative VIBNI_A0559 eab3b9d98aa2c72e0c100ed835207b90 227 Gene3D G3DSA:2.60.120.10 115 205 1.3E-24 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 Pfam PF07729 FCD domain 108 229 1.8E-25 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 Gene3D G3DSA:1.10.10.10 14 87 1.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 SMART SM00895 108 230 4.7E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 1.2E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 3.0E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 3.0E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 SMART SM00345 24 83 6.3E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 SUPERFAMILY SSF48008 106 232 1.83E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 SUPERFAMILY SSF46785 17 87 4.29E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1546 a8f2e8e4c9c9a9d815db10c59d597ebc 242 Gene3D G3DSA:1.20.120.530 105 241 6.0E-28 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.915 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 PIRSF PIRSF002134 1 118 5.1E-41 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 Gene3D G3DSA:1.10.8.50 1 71 1.7E-27 T 15-10-2018 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.6E-53 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.2E-32 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3156 de6300fe4b04eb70da4f441b62a58a7e 118 SUPERFAMILY SSF46946 2 114 8.39E-45 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VIBNI_A2979 1d2d9a15effbd73840524126204f8047 481 Gene3D G3DSA:3.30.2290.10 11 240 1.9E-14 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VIBNI_A2979 1d2d9a15effbd73840524126204f8047 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.1E-67 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VIBNI_A2979 1d2d9a15effbd73840524126204f8047 481 SUPERFAMILY SSF111283 18 480 4.58E-131 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VIBNI_A2979 1d2d9a15effbd73840524126204f8047 481 PIRSF PIRSF004919 15 481 1.3E-144 T 15-10-2018 IPR025502 TldD VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 Gene3D G3DSA:3.30.70.920 64 159 1.3E-24 T 15-10-2018 VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 SUPERFAMILY SSF54909 74 158 1.33E-21 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.5E-23 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 15-10-2018 VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 Gene3D G3DSA:1.10.10.10 1 63 4.1E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 SUPERFAMILY SSF46785 12 70 1.95E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2324 2eb96a95a8699b8a198598149fedff71 164 SMART SM00344 12 121 4.2E-54 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 Gene3D G3DSA:1.10.10.10 5 93 1.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 Gene3D G3DSA:3.40.190.290 95 294 6.6E-59 T 15-10-2018 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 SUPERFAMILY SSF53850 90 296 3.1E-40 T 15-10-2018 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.6E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 Pfam PF03466 LysR substrate binding domain 92 295 3.1E-39 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 SUPERFAMILY SSF46785 6 86 1.36E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0820 0581e1890029650852e3dd1d7e6486a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.4E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1508 0738ea9eaa15e3b2f799382329eb96b4 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 202 352 3.3E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1508 0738ea9eaa15e3b2f799382329eb96b4 361 SMART SM00267 191 357 1.2E-55 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1508 0738ea9eaa15e3b2f799382329eb96b4 361 SUPERFAMILY SSF55073 207 359 2.35E-43 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1508 0738ea9eaa15e3b2f799382329eb96b4 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 355 2.5E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1508 0738ea9eaa15e3b2f799382329eb96b4 361 Gene3D G3DSA:3.30.70.270 196 361 2.8E-55 T 15-10-2018 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 SUPERFAMILY SSF48179 164 295 9.18E-39 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 Gene3D G3DSA:1.10.1040.10 166 296 8.9E-44 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 293 4.7E-119 T 15-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 Gene3D G3DSA:3.40.50.720 1 165 4.4E-53 T 15-10-2018 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 292 4.9E-34 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 1.1E-49 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 SUPERFAMILY SSF51735 2 164 1.13E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0945 e80e3137c682d07059ae0729675276bf 296 PIRSF PIRSF000103 1 296 6.3E-77 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.1E-23 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Gene3D G3DSA:3.40.1030.10 72 339 2.2E-101 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 SUPERFAMILY SSF54680 337 437 8.24E-29 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.706 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 SUPERFAMILY SSF47648 2 70 3.79E-22 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.7E-48 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 SMART SM00941 350 424 3.0E-29 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 422 1.7E-160 T 15-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Gene3D G3DSA:3.90.1170.30 340 432 1.7E-29 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 434 2.6E-213 T 15-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 15-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 4.3E-22 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 Gene3D G3DSA:1.20.970.10 4 67 9.5E-26 T 15-10-2018 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 PIRSF PIRSF000478 1 439 3.4E-151 T 15-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0494 f4dd824ef8d991f7cf9e39cd37963fc9 442 SUPERFAMILY SSF52418 72 334 7.98E-90 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 45 115 1.1E-9 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 SUPERFAMILY SSF54292 35 124 1.21E-21 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 5.1E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 5.1E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 5.1E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.1E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 5.1E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 SUPERFAMILY SSF63380 105 272 5.62E-36 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 SUPERFAMILY SSF52343 258 402 3.01E-35 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 6.9E-9 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Gene3D G3DSA:3.10.20.30 34 125 2.6E-31 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.507 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Gene3D G3DSA:3.40.50.80 275 393 3.3E-30 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.8E-227 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 PIRSF PIRSF000044 1 407 8.1E-218 T 15-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 9.9E-17 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_A0571 a87ec9b98226dd3f7dcdd1c67cbf60df 407 Gene3D G3DSA:2.40.30.10 126 264 8.6E-53 T 15-10-2018 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 SUPERFAMILY SSF52540 1 193 5.22E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.5E-75 T 15-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 Gene3D G3DSA:3.40.50.300 1 214 3.5E-78 T 15-10-2018 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 Pfam PF00406 Adenylate kinase 5 185 2.7E-59 T 15-10-2018 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 7.3E-15 T 15-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VIBNI_A2600 cd301b4ac79500ad079c69f5efd2486a 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.051 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VIBNI_B0914 1b3c563d5c364987913760d64b6a9220 171 Pfam PF00293 NUDIX domain 35 156 6.2E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B0914 1b3c563d5c364987913760d64b6a9220 171 Gene3D G3DSA:3.90.79.10 1 167 1.8E-46 T 15-10-2018 VIBNI_B0914 1b3c563d5c364987913760d64b6a9220 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_B0914 1b3c563d5c364987913760d64b6a9220 171 SUPERFAMILY SSF55811 2 169 1.62E-44 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 508 4.6E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 296 325 4.9E-6 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 4.9E-6 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 Pfam PF17200 Single Cache domain 2 42 187 8.0E-36 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 SMART SM01049 37 130 5.2E-22 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 SMART SM00304 213 267 2.1E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 SMART SM00283 282 543 2.2E-72 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 Gene3D G3DSA:1.10.287.950 212 545 1.5E-70 T 15-10-2018 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 SUPERFAMILY SSF58104 235 544 6.28E-73 T 15-10-2018 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 Gene3D G3DSA:3.30.450.20 36 190 9.9E-40 T 15-10-2018 VIBNI_A1338 f50e110baee4f455420103f060bb1fbb 545 Pfam PF00672 HAMP domain 213 263 7.3E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0642 8f9b6609922bbd0dcca471d46c8c5bbd 200 Gene3D G3DSA:3.40.50.150 11 142 6.5E-14 T 15-10-2018 VIBNI_B0642 8f9b6609922bbd0dcca471d46c8c5bbd 200 SUPERFAMILY SSF53335 34 139 1.03E-14 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0642 8f9b6609922bbd0dcca471d46c8c5bbd 200 Pfam PF13847 Methyltransferase domain 51 137 2.7E-10 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 SUPERFAMILY SSF103088 69 179 3.53E-33 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 2.1E-43 T 15-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 Pfam PF00691 OmpA family 78 173 5.4E-22 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 179 30.397 T 15-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 PRINTS PR01021 OMPA domain signature 109 124 2.2E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 PRINTS PR01021 OMPA domain signature 79 101 2.2E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 PRINTS PR01021 OMPA domain signature 124 140 2.2E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A2256 48fd9f34128c44029bab6e10675ee928 179 Gene3D G3DSA:3.30.1330.60 48 179 2.2E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.5E-158 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 SUPERFAMILY SSF51556 54 347 1.16E-99 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 Gene3D G3DSA:3.20.20.140 55 341 7.2E-141 T 15-10-2018 VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 Gene3D G3DSA:2.30.40.10 6 373 7.2E-141 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 SUPERFAMILY SSF51338 1 53 3.64E-19 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 PIRSF PIRSF038994 1 378 2.7E-120 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A2582 43cfa9dd7b7a093dcf7146d0b1330c3c 378 Pfam PF01979 Amidohydrolase family 51 374 1.0E-38 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 Pfam PF01584 CheW-like domain 21 155 1.5E-34 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 SUPERFAMILY SSF52172 183 306 3.7E-26 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 SMART SM00260 17 153 9.0E-26 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 SUPERFAMILY SSF50341 16 157 7.46E-36 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 SMART SM00448 182 302 4.4E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 PIRSF PIRSF002867 1 308 4.6E-103 T 15-10-2018 IPR024181 Chemotaxis response regulator CheV VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 Pfam PF00072 Response regulator receiver domain 184 302 4.0E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 Gene3D G3DSA:2.30.30.40 23 147 1.6E-28 T 15-10-2018 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 Gene3D G3DSA:2.40.50.180 39 153 1.6E-28 T 15-10-2018 VIBNI_A2644 1ee2f74a0899dc666a0ea2bf65dc7c2d 308 Gene3D G3DSA:3.40.50.2300 167 307 2.3E-26 T 15-10-2018 VIBNI_A3870 58932a166ee5f5884e368e6c37dd10ea 257 SUPERFAMILY SSF52540 3 253 3.25E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3870 58932a166ee5f5884e368e6c37dd10ea 257 PIRSF PIRSF009320 3 75 8.4E-14 T 15-10-2018 VIBNI_A3870 58932a166ee5f5884e368e6c37dd10ea 257 PIRSF PIRSF009320 88 249 2.5E-8 T 15-10-2018 VIBNI_A3870 58932a166ee5f5884e368e6c37dd10ea 257 Gene3D G3DSA:3.40.50.300 1 255 3.4E-77 T 15-10-2018 VIBNI_A3870 58932a166ee5f5884e368e6c37dd10ea 257 Pfam PF13614 AAA domain 2 178 8.4E-62 T 15-10-2018 IPR025669 AAA domain VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 Gene3D G3DSA:3.40.1780.10 14 345 4.1E-119 T 15-10-2018 VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 Gene3D G3DSA:2.40.10.240 64 163 4.1E-119 T 15-10-2018 VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.762 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.8E-161 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 4.1E-135 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VIBNI_A0424 6905ad920241498b599ca6084df7f450 350 SUPERFAMILY SSF111337 1 345 2.22E-139 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VIBNI_A3888 7f54679e00ea908c0cda703c33df4f10 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 5.7E-26 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3888 7f54679e00ea908c0cda703c33df4f10 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.276 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3888 7f54679e00ea908c0cda703c33df4f10 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 15-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3888 7f54679e00ea908c0cda703c33df4f10 45 Pfam PF00468 Ribosomal protein L34 3 44 5.1E-24 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3888 7f54679e00ea908c0cda703c33df4f10 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 40 4.0E-14 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_B0699 4618b18196ee52beeacae0815fb9fbbf 105 PIRSF PIRSF028139 1 105 7.1E-39 T 15-10-2018 IPR014980 Dopa 4,5-dioxygenase VIBNI_B0699 4618b18196ee52beeacae0815fb9fbbf 105 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 2.6E-27 T 15-10-2018 IPR014980 Dopa 4,5-dioxygenase VIBNI_B0699 4618b18196ee52beeacae0815fb9fbbf 105 SUPERFAMILY SSF143410 1 103 2.22E-32 T 15-10-2018 IPR023389 DOPA-like superfamily VIBNI_B0699 4618b18196ee52beeacae0815fb9fbbf 105 Gene3D G3DSA:3.30.70.1240 1 104 4.0E-28 T 15-10-2018 IPR023389 DOPA-like superfamily VIBNI_A3199 31975cfe3c68d55a8a954b5462bc927b 156 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 7.4E-33 T 15-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VIBNI_A3199 31975cfe3c68d55a8a954b5462bc927b 156 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 3.2E-27 T 15-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 Gene3D G3DSA:2.40.50.140 1 65 1.3E-25 T 15-10-2018 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 SMART SM00357 3 67 2.0E-23 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.8E-27 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-14 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-14 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-14 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 SUPERFAMILY SSF50249 1 67 6.0E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 7.6E-42 T 15-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VIBNI_A2131 eed534cabb86f4d4a661ff1c3b9e0c25 73 PIRSF PIRSF002599 1 72 5.1E-23 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 5.0E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Gene3D G3DSA:3.40.50.80 453 607 7.9E-62 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PIRSF PIRSF000207 1 607 3.9E-272 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 SUPERFAMILY SSF63380 236 453 8.17E-63 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Gene3D G3DSA:1.20.990.10 288 392 8.0E-72 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 SUPERFAMILY SSF52343 452 607 2.75E-53 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00369 Flavodoxin signature 71 84 7.4E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00369 Flavodoxin signature 119 130 7.4E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00369 Flavodoxin signature 175 194 7.4E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 PRINTS PR00369 Flavodoxin signature 151 161 7.4E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Gene3D G3DSA:3.40.50.360 60 223 3.1E-47 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 607 1.6E-256 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 3.1E-19 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Pfam PF00258 Flavodoxin 72 196 4.1E-31 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 607 49.254 T 15-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Pfam PF00667 FAD binding domain 240 432 5.2E-28 T 15-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 Gene3D G3DSA:2.40.30.10 240 447 8.0E-72 T 15-10-2018 VIBNI_A3507 429e1812d9059cb2ec6d90ce2b380f54 607 SUPERFAMILY SSF52218 69 215 1.71E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0963 83fbcefcf701877a49568cfe7954356e 283 Gene3D G3DSA:1.10.3720.10 66 282 2.8E-18 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0963 83fbcefcf701877a49568cfe7954356e 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 281 1.9E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0963 83fbcefcf701877a49568cfe7954356e 283 SUPERFAMILY SSF161098 74 281 1.05E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 Gene3D G3DSA:3.40.50.300 471 736 3.8E-65 T 15-10-2018 VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 Pfam PF13614 AAA domain 549 690 1.3E-13 T 15-10-2018 IPR025669 AAA domain VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 Pfam PF02706 Chain length determinant protein 14 105 5.3E-11 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 Pfam PF13807 G-rich domain on putative tyrosine kinase 405 477 1.6E-10 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 530 732 8.4E-49 T 15-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VIBNI_B1619 76955cb14233fb07584a0c4b40776eec 736 SUPERFAMILY SSF52540 549 726 1.73E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 Pfam PF00437 Type II/IV secretion system protein 128 393 5.2E-91 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 13 498 6.5E-227 T 15-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 SMART SM00382 254 377 2.8E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 SUPERFAMILY SSF160246 12 79 1.62E-12 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 Gene3D G3DSA:3.40.50.300 227 501 1.8E-127 T 15-10-2018 VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 SUPERFAMILY SSF52540 108 498 2.03E-106 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 Gene3D G3DSA:3.30.300.160 4 91 4.4E-30 T 15-10-2018 VIBNI_A3378 3ddd2d416a12f0af7cf7ea0ba5884578 501 Gene3D G3DSA:3.30.450.90 92 226 5.2E-56 T 15-10-2018 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Pfam PF04851 Type III restriction enzyme, res subunit 268 428 2.2E-16 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Gene3D G3DSA:3.40.50.300 265 456 1.4E-47 T 15-10-2018 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 SUPERFAMILY SSF52540 218 476 1.41E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Gene3D G3DSA:3.90.1570.50 100 262 7.2E-26 T 15-10-2018 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 717 3.2E-151 T 15-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 SMART SM00487 262 473 7.6E-6 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 208 3.1E-34 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Gene3D G3DSA:3.40.50.300 457 712 8.3E-39 T 15-10-2018 VIBNI_A2017 4f768ea820a19c861629ed8d40306924 1064 Pfam PF11867 Domain of unknown function (DUF3387) 731 1047 4.9E-32 T 15-10-2018 IPR021810 Protein of unknown function DUF3387 VIBNI_A1171 ab28c0c95c5a96c60e33734254c2b855 176 SUPERFAMILY SSF55729 10 170 2.13E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1171 ab28c0c95c5a96c60e33734254c2b855 176 Pfam PF13302 Acetyltransferase (GNAT) domain 64 147 7.4E-13 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1171 ab28c0c95c5a96c60e33734254c2b855 176 Gene3D G3DSA:3.40.630.30 7 171 2.9E-26 T 15-10-2018 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Pfam PF00136 DNA polymerase family B 377 742 3.8E-46 T 15-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 SUPERFAMILY SSF53098 4 389 9.97E-82 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 83 296 1.8E-15 T 15-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:3.90.1600.10 440 636 8.3E-58 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:3.90.1600.10 348 439 4.4E-29 T 15-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 15-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 SMART SM00486 153 558 3.4E-60 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:1.10.132.60 643 787 1.5E-59 T 15-10-2018 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:3.30.420.10 156 347 8.0E-72 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 15-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:2.40.50.590 6 153 3.7E-37 T 15-10-2018 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 Gene3D G3DSA:3.30.70.2250 41 108 3.7E-37 T 15-10-2018 VIBNI_A1305 c81b59a82d1a21ec35f197231c26fa17 787 SUPERFAMILY SSF56672 385 780 2.17E-117 T 15-10-2018 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 SUPERFAMILY SSF52540 213 457 2.98E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Gene3D G3DSA:3.40.50.300 208 454 8.7E-81 T 15-10-2018 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 SUPERFAMILY SSF52540 291 656 1.39E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Pfam PF00271 Helicase conserved C-terminal domain 485 591 6.9E-17 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 SMART SM00490 508 592 1.2E-20 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 SMART SM00487 264 463 6.8E-31 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 SUPERFAMILY SSF50249 8 173 6.85E-40 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 667 1.8E-232 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Gene3D G3DSA:2.40.50.140 46 140 1.0E-11 T 15-10-2018 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Pfam PF17191 RecG wedge domain 14 170 1.3E-19 T 15-10-2018 IPR033454 RecG, wedge domain VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Pfam PF00270 DEAD/DEAH box helicase 272 435 9.3E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Gene3D G3DSA:1.10.150.20 1 42 4.4E-5 T 15-10-2018 VIBNI_A3721 990653fecd9af0466798e6e8f9eb00a6 696 Gene3D G3DSA:3.40.50.300 461 633 2.5E-52 T 15-10-2018 VIBNI_A3132 162316a5c7b52c3cbd343e3fb59d89ed 297 Pfam PF10987 Protein of unknown function (DUF2806) 57 275 3.0E-85 T 15-10-2018 IPR021254 Protein of unknown function DUF2806 VIBNI_A3132 162316a5c7b52c3cbd343e3fb59d89ed 297 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 36 285 1.4E-104 T 15-10-2018 IPR021254 Protein of unknown function DUF2806 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 SUPERFAMILY SSF53328 82 276 1.96E-59 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 2.6E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 Gene3D G3DSA:3.30.70.260 1 76 3.8E-14 T 15-10-2018 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 PIRSF PIRSF036480 1 277 1.3E-111 T 15-10-2018 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 Gene3D G3DSA:3.40.50.170 82 277 3.3E-66 T 15-10-2018 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 Pfam PF01842 ACT domain 5 49 1.8E-6 T 15-10-2018 IPR002912 ACT domain VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 SUPERFAMILY SSF55021 4 53 2.62E-8 T 15-10-2018 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.1E-119 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 Pfam PF00551 Formyl transferase 82 259 1.6E-46 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A2534 922feebf44ce61c45ee5ee50af5bca03 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.556 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VIBNI_B1903 e63faf8be0d930f7a916b5d0a32a3d2b 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 152 8.4E-26 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 SUPERFAMILY SSF51658 1 276 2.36E-101 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 Gene3D G3DSA:3.20.20.150 1 282 5.4E-113 T 15-10-2018 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 SMART SM00518 3 279 9.6E-127 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.2E-42 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 277 3.4E-110 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VIBNI_A0292 df43b11b7ba01e3a25144454ca4fdee2 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.906 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VIBNI_A0266 3e30e402d8ef3ff1af511434368cdba6 276 Gene3D G3DSA:3.40.50.1980 144 270 8.2E-31 T 15-10-2018 VIBNI_A0266 3e30e402d8ef3ff1af511434368cdba6 276 Pfam PF01497 Periplasmic binding protein 26 247 3.2E-27 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A0266 3e30e402d8ef3ff1af511434368cdba6 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 3 272 47.806 T 15-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VIBNI_A0266 3e30e402d8ef3ff1af511434368cdba6 276 SUPERFAMILY SSF53807 23 268 1.37E-57 T 15-10-2018 VIBNI_A0266 3e30e402d8ef3ff1af511434368cdba6 276 Gene3D G3DSA:3.40.50.1980 22 141 2.8E-33 T 15-10-2018 VIBNI_A3640 43c4402446f3079ad2dd23179fc8577e 275 Gene3D G3DSA:3.90.550.10 3 153 1.6E-7 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3640 43c4402446f3079ad2dd23179fc8577e 275 SUPERFAMILY SSF53448 23 147 2.93E-6 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3640 43c4402446f3079ad2dd23179fc8577e 275 Pfam PF13704 Glycosyl transferase family 2 32 120 4.0E-8 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 174 393 1.4E-48 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Gene3D G3DSA:3.40.630.40 161 402 1.8E-67 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Gene3D G3DSA:2.60.40.3500 22 137 3.6E-26 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Pfam PF01476 LysM domain 415 456 1.4E-12 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Pfam PF01476 LysM domain 526 568 3.5E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Pfam PF01476 LysM domain 473 514 6.0E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SUPERFAMILY SSF53187 172 396 4.08E-50 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SUPERFAMILY SSF54106 524 568 9.55E-11 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Gene3D G3DSA:3.10.350.10 524 570 7.6E-16 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Gene3D G3DSA:3.10.350.10 469 519 3.9E-16 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Gene3D G3DSA:3.10.350.10 410 463 2.2E-14 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SUPERFAMILY SSF54106 413 456 2.09E-9 T 15-10-2018 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SMART SM00257 472 515 7.3E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SMART SM00257 414 457 6.8E-15 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SMART SM00257 525 568 2.7E-14 T 15-10-2018 IPR018392 LysM domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SMART SM00646 234 393 1.1E-63 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 Pfam PF11741 AMIN domain 33 135 6.7E-18 T 15-10-2018 IPR021731 AMIN domain VIBNI_A3221 9311e479e9e3e004f9a514c19d795f88 570 SUPERFAMILY SSF54106 471 515 1.26E-10 T 15-10-2018 VIBNI_A1202 c04a7b3e88da81f43e97a5bb71870c65 323 PIRSF PIRSF006470 10 315 7.4E-86 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A1202 c04a7b3e88da81f43e97a5bb71870c65 323 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 279 1.6E-62 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A1202 c04a7b3e88da81f43e97a5bb71870c65 323 Gene3D G3DSA:3.40.190.170 27 323 4.7E-98 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1202 c04a7b3e88da81f43e97a5bb71870c65 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 309 2.3E-80 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 PIRSF PIRSF006305 1 190 2.2E-55 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 186 4.9E-53 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 Hamap MF_00528 Septum formation protein Maf [maf]. 7 190 28.895 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 SUPERFAMILY SSF52972 5 188 4.12E-59 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 Gene3D G3DSA:3.90.950.10 6 190 3.6E-68 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A2983 524dca78d4814380d0b3545c207fb99d 190 Pfam PF02545 Maf-like protein 7 188 2.2E-58 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 Gene3D G3DSA:3.10.310.10 119 250 2.1E-81 T 15-10-2018 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 258 4.2E-52 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 PIRSF PIRSF016184 1 262 8.2E-47 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 SUPERFAMILY SSF54506 1 261 3.77E-73 T 15-10-2018 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 Gene3D G3DSA:3.10.310.10 7 253 2.1E-81 T 15-10-2018 VIBNI_B0713 e7e545240635a353643bf9c99c475cce 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 262 3.1E-31 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 53 158 4.7E-10 T 15-10-2018 IPR033414 Periplasmic sensor domain VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 552 657 6.9E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 SMART SM00091 257 324 7.1E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 614 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 600 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Gene3D G3DSA:3.30.450.20 237 369 1.4E-14 T 15-10-2018 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 SUPERFAMILY SSF55785 244 363 8.86E-12 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Pfam PF00989 PAS fold 259 343 1.4E-9 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 SMART SM00387 545 658 1.9E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 SUPERFAMILY SSF55874 505 658 5.11E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Gene3D G3DSA:1.10.287.130 395 497 5.2E-19 T 15-10-2018 VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 Gene3D G3DSA:3.30.565.10 505 661 9.9E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1644 5eb229ea6d0c7d02bde14b3d9a609d82 667 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 372 4.0E-13 T 15-10-2018 IPR000014 PAS domain VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 Pfam PF00137 ATP synthase subunit C 10 72 9.1E-10 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 15-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.464 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 2.3E-30 T 15-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.9E-6 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.9E-6 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.9E-6 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 SUPERFAMILY SSF81333 3 78 3.01E-19 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VIBNI_A3866 f31889993171c9ec88b5bcc56a9c8f81 85 Gene3D G3DSA:1.20.20.10 2 77 7.4E-28 T 15-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_B1382 a6c0c576e2d015d75b3a0f89dc6490a3 283 SUPERFAMILY SSF161098 11 283 5.98E-64 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1382 a6c0c576e2d015d75b3a0f89dc6490a3 283 Gene3D G3DSA:1.10.3720.10 5 274 2.8E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1382 a6c0c576e2d015d75b3a0f89dc6490a3 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 274 5.8E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0134 02a0fd24ab4cc24322d583b3a553a72e 122 Pfam PF01638 HxlR-like helix-turn-helix 31 115 2.7E-23 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type VIBNI_B0134 02a0fd24ab4cc24322d583b3a553a72e 122 Gene3D G3DSA:1.10.10.10 7 118 7.0E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0134 02a0fd24ab4cc24322d583b3a553a72e 122 SUPERFAMILY SSF46785 18 116 3.03E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 Pfam PF02779 Transketolase, pyrimidine binding domain 34 196 2.2E-34 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 SUPERFAMILY SSF52922 203 339 1.44E-32 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 Pfam PF02780 Transketolase, C-terminal domain 209 331 4.0E-27 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 SMART SM00861 33 197 4.4E-46 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 Gene3D G3DSA:3.40.50.920 208 339 2.2E-31 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 SUPERFAMILY SSF52518 31 198 8.03E-48 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0440 ca9422430d39a8d55a6b21674ec8c7d1 341 Gene3D G3DSA:3.40.50.970 31 203 6.8E-52 T 15-10-2018 VIBNI_B1125 074d4e369a54f5523b2dbcbd02555811 247 Pfam PF03746 LamB/YcsF family 7 244 2.6E-94 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VIBNI_B1125 074d4e369a54f5523b2dbcbd02555811 247 Gene3D G3DSA:3.20.20.370 5 247 1.9E-98 T 15-10-2018 VIBNI_B1125 074d4e369a54f5523b2dbcbd02555811 247 SUPERFAMILY SSF88713 5 245 5.48E-91 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_B1125 074d4e369a54f5523b2dbcbd02555811 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 247 41.187 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VIBNI_A3410 413d6906be10b199d04dd2303d6d05ea 254 PIRSF PIRSF005902 1 254 1.4E-69 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_A3410 413d6906be10b199d04dd2303d6d05ea 254 Pfam PF01026 TatD related DNase 2 252 1.1E-64 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_A3410 413d6906be10b199d04dd2303d6d05ea 254 Gene3D G3DSA:3.20.20.140 1 253 1.3E-79 T 15-10-2018 VIBNI_A3410 413d6906be10b199d04dd2303d6d05ea 254 SUPERFAMILY SSF51556 1 253 4.73E-80 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A3410 413d6906be10b199d04dd2303d6d05ea 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.7E-72 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SUPERFAMILY SSF55785 503 610 9.42E-18 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 621 785 6.9E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SMART SM00086 448 490 1.1 T 15-10-2018 IPR001610 PAC motif VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SMART SM00086 570 612 0.0083 T 15-10-2018 IPR001610 PAC motif VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SUPERFAMILY SSF55073 628 788 1.24E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Pfam PF08447 PAS fold 397 483 2.1E-16 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 494 619 6.9E-12 T 15-10-2018 IPR000014 PAS domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 388 496 1.3E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Pfam PF00990 Diguanylate cyclase, GGDEF domain 623 781 1.5E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Pfam PF13426 PAS domain 509 610 9.0E-11 T 15-10-2018 IPR000014 PAS domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Gene3D G3DSA:3.30.70.270 621 794 5.2E-55 T 15-10-2018 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SMART SM00091 498 564 0.061 T 15-10-2018 IPR000014 PAS domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SMART SM00091 374 442 1.2 T 15-10-2018 IPR000014 PAS domain VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Gene3D G3DSA:2.10.70.100 444 490 3.9E-7 T 15-10-2018 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Gene3D G3DSA:3.30.450.20 492 620 3.5E-22 T 15-10-2018 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Pfam PF14827 Double sensory domain of two-component sensor kinase 32 304 9.9E-14 T 15-10-2018 IPR029150 Double Cache domain 3 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 Gene3D G3DSA:3.30.450.20 370 442 4.2E-22 T 15-10-2018 VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SUPERFAMILY SSF55785 383 489 9.42E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1000 3ebcc67800702171f1f40dac6977618f 794 SMART SM00267 612 786 1.1E-53 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 6.3E-240 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Pfam PF00890 FAD binding domain 9 405 4.9E-117 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 SUPERFAMILY SSF46977 452 588 1.7E-47 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Gene3D G3DSA:1.20.58.100 431 547 4.6E-38 T 15-10-2018 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Gene3D G3DSA:3.90.700.10 246 350 1.2E-168 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.9E-37 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Gene3D G3DSA:4.10.80.40 548 588 1.3E-22 T 15-10-2018 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 Gene3D G3DSA:3.50.50.60 9 416 1.2E-168 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 PIRSF PIRSF000171 1 580 4.0E-49 T 15-10-2018 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.0E-275 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 SUPERFAMILY SSF51905 5 443 1.89E-71 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2565 f1b3a5879946cad7cb65c0170ff93826 588 SUPERFAMILY SSF56425 236 356 3.74E-42 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 SMART SM00354 4 74 2.6E-31 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 Gene3D G3DSA:1.10.260.40 2 60 3.0E-20 T 15-10-2018 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 Gene3D G3DSA:3.40.50.2300 163 279 1.3E-59 T 15-10-2018 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 15-10-2018 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 Pfam PF13377 Periplasmic binding protein-like domain 169 310 5.5E-17 T 15-10-2018 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 2.6E-138 T 15-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.7E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 SUPERFAMILY SSF47413 3 60 3.94E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 Gene3D G3DSA:3.40.50.2300 68 302 1.3E-59 T 15-10-2018 VIBNI_A2729 2741e8c90dcebbde08d6148911718a8b 316 SUPERFAMILY SSF53822 63 314 2.55E-58 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2965 86c12ae5bcd711ae70d58bc8b7cc306e 243 SMART SM00563 67 182 2.4E-41 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2965 86c12ae5bcd711ae70d58bc8b7cc306e 243 Pfam PF01553 Acyltransferase 59 180 6.6E-32 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2965 86c12ae5bcd711ae70d58bc8b7cc306e 243 SUPERFAMILY SSF69593 8 237 1.7E-58 T 15-10-2018 VIBNI_A2965 86c12ae5bcd711ae70d58bc8b7cc306e 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.7E-45 T 15-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 SUPERFAMILY SSF52540 73 359 1.83E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 Pfam PF00270 DEAD/DEAH box helicase 26 193 3.9E-48 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 479 49.62 T 15-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 SMART SM00490 257 338 7.1E-30 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 Gene3D G3DSA:3.40.50.300 1 209 1.0E-76 T 15-10-2018 VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 Pfam PF00271 Helicase conserved C-terminal domain 230 338 9.0E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 Gene3D G3DSA:3.40.50.300 212 384 1.3E-46 T 15-10-2018 VIBNI_A1518 2bdc08e304c421196acdcba4f8e2c863 486 SMART SM00487 20 221 5.0E-60 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 PIRSF PIRSF006769 2 364 7.1E-124 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 360 1.7E-56 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 Gene3D G3DSA:3.40.140.10 1 144 5.4E-47 T 15-10-2018 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 357 5.0E-129 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 Pfam PF01872 RibD C-terminal domain 151 355 1.0E-46 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 SUPERFAMILY SSF53927 7 148 2.34E-48 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 Gene3D G3DSA:3.40.430.10 145 364 8.1E-64 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 7.8E-21 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VIBNI_A0653 707f47f819c66cb5d8f3a43c79253ddf 365 SUPERFAMILY SSF53597 148 358 2.77E-52 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_B0923 c6ff0fee1e325bc0013fa15ab6e357fd 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 424 1.4E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0923 c6ff0fee1e325bc0013fa15ab6e357fd 449 Gene3D G3DSA:3.30.70.270 264 442 1.2E-51 T 15-10-2018 VIBNI_B0923 c6ff0fee1e325bc0013fa15ab6e357fd 449 SMART SM00267 259 430 5.2E-52 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0923 c6ff0fee1e325bc0013fa15ab6e357fd 449 SUPERFAMILY SSF55073 275 429 7.45E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0923 c6ff0fee1e325bc0013fa15ab6e357fd 449 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 424 7.5E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 PIRSF PIRSF037119 1 782 3.4E-262 T 15-10-2018 IPR017116 Signal transduction histidine kinase, PgtB VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SUPERFAMILY SSF47384 557 627 1.39E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 Gene3D G3DSA:1.10.287.130 537 624 7.8E-21 T 15-10-2018 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 Gene3D G3DSA:3.30.450.20 382 511 9.0E-6 T 15-10-2018 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 726 3.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 730 740 3.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 759 3.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 765 778 3.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SUPERFAMILY SSF55785 381 505 2.51E-5 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 674 779 4.5E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 Pfam PF00512 His Kinase A (phospho-acceptor) domain 563 627 1.7E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SMART SM00388 561 629 2.3E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SMART SM00304 342 394 0.0047 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SMART SM00387 672 781 6.0E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 SUPERFAMILY SSF55874 628 778 3.8E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1112 98540366ec2a3f55c5ffe454362f8409 782 Gene3D G3DSA:3.30.565.10 633 781 1.7E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3242 fcf7065a6a35674c019ab294b36f9e5a 463 Pfam PF01145 SPFH domain / Band 7 family 41 292 1.4E-36 T 15-10-2018 IPR001107 Band 7 domain VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 266 2.7E-7 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 SUPERFAMILY SSF52540 4 253 3.82E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 Gene3D G3DSA:3.40.50.300 1 275 1.2E-84 T 15-10-2018 VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 Pfam PF00005 ABC transporter 32 182 3.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1098 8622a995d4ba5d15eed5fcc8dd4f4dbd 275 SMART SM00382 40 232 1.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 SUPERFAMILY SSF54747 3 73 1.31E-30 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 8.0E-14 T 15-10-2018 VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 Gene3D G3DSA:3.30.1550.10 2 72 1.2E-34 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 SMART SM00649 9 141 1.0E-83 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 SUPERFAMILY SSF46906 68 141 6.41E-25 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.1E-64 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 Gene3D G3DSA:1.10.10.250 73 141 2.2E-25 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-31 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.2E-23 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VIBNI_A3331 adbebce633320530560f6be27ab5b173 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.869 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 Gene3D G3DSA:3.30.565.10 279 424 4.0E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 SMART SM00387 322 424 4.9E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 SUPERFAMILY SSF55874 266 417 1.7E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 412 1.7E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 277 5.0E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 7.5E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 7.5E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 SUPERFAMILY SSF158472 159 206 9.68E-5 T 15-10-2018 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 Gene3D G3DSA:1.10.287.130 161 278 1.2E-13 T 15-10-2018 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 SUPERFAMILY SSF47384 194 278 1.59E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1047 dbad054788d8b7a30347831174473fc8 424 SMART SM00388 211 277 1.4E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 426 8.8E-86 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 Gene3D G3DSA:3.40.190.10 32 278 9.4E-121 T 15-10-2018 VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 SUPERFAMILY SSF53850 26 516 8.01E-129 T 15-10-2018 VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 PIRSF PIRSF002741 22 501 8.0E-92 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 Gene3D G3DSA:3.90.76.10 57 169 9.4E-121 T 15-10-2018 VIBNI_A3490 7c4edd965abfdeee49fef62b0146c8df 517 Gene3D G3DSA:3.10.105.10 279 494 9.4E-121 T 15-10-2018 VIBNI_A0565 7250efdccfa09b42815a6fdcaa2ec634 104 Pfam PF01722 BolA-like protein 10 83 7.9E-31 T 15-10-2018 IPR002634 BolA protein VIBNI_A0565 7250efdccfa09b42815a6fdcaa2ec634 104 PIRSF PIRSF003113 1 99 2.4E-37 T 15-10-2018 IPR002634 BolA protein VIBNI_A0565 7250efdccfa09b42815a6fdcaa2ec634 104 SUPERFAMILY SSF82657 1 87 2.62E-31 T 15-10-2018 IPR036065 BolA-like superfamily VIBNI_A0565 7250efdccfa09b42815a6fdcaa2ec634 104 Gene3D G3DSA:3.30.300.90 1 88 1.7E-35 T 15-10-2018 VIBNI_B0423 306456dcf1dc84538841d3a0f4448216 284 SUPERFAMILY SSF51658 23 277 5.24E-46 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_B0423 306456dcf1dc84538841d3a0f4448216 284 Gene3D G3DSA:3.20.20.150 6 284 1.7E-59 T 15-10-2018 VIBNI_B0423 306456dcf1dc84538841d3a0f4448216 284 Pfam PF01261 Xylose isomerase-like TIM barrel 36 236 9.4E-25 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A2112 58c08d0409cbdd2a52e13beffee013b6 213 Pfam PF02613 Nitrate reductase delta subunit 50 180 2.4E-35 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VIBNI_A2112 58c08d0409cbdd2a52e13beffee013b6 213 Gene3D G3DSA:1.20.1280.20 127 212 2.0E-24 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2112 58c08d0409cbdd2a52e13beffee013b6 213 Hamap MF_01150 Chaperone protein TorD [torD]. 3 210 33.142 T 15-10-2018 IPR023069 Chaperone TorD VIBNI_A2112 58c08d0409cbdd2a52e13beffee013b6 213 SUPERFAMILY SSF89155 8 210 2.22E-50 T 15-10-2018 IPR036411 TorD-like superfamily VIBNI_A2112 58c08d0409cbdd2a52e13beffee013b6 213 Gene3D G3DSA:1.20.120.1820 3 124 6.6E-38 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 SUPERFAMILY SSF56024 316 496 1.76E-53 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 SUPERFAMILY SSF143724 107 313 7.46E-63 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 8.0E-31 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 SUPERFAMILY SSF140356 4 104 1.03E-32 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 8.8E-261 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Gene3D G3DSA:3.30.870.10 320 499 2.3E-72 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.2E-43 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 PIRSF PIRSF015589 1 694 2.3E-251 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Gene3D G3DSA:3.30.1840.10 110 307 5.3E-74 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Gene3D G3DSA:1.20.58.310 9 109 1.9E-36 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 6.6E-144 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 SUPERFAMILY SSF56024 501 684 3.14E-68 T 15-10-2018 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.23 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VIBNI_A0409 01c23f8d301c6cbfcf08bee8175ac48f 697 Gene3D G3DSA:3.30.870.10 500 686 2.4E-71 T 15-10-2018 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Pfam PF00271 Helicase conserved C-terminal domain 230 334 2.6E-19 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 607 2.2E-252 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SMART SM00956 415 518 2.0E-52 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Gene3D G3DSA:3.40.50.300 213 344 3.8E-42 T 15-10-2018 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Gene3D G3DSA:3.40.50.300 10 212 8.5E-82 T 15-10-2018 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Pfam PF00570 HRDC domain 538 604 1.5E-21 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Gene3D G3DSA:1.10.10.10 345 527 2.4E-54 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SMART SM00341 534 612 1.4E-21 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SMART SM00490 254 335 1.8E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Pfam PF00270 DEAD/DEAH box helicase 34 191 4.3E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SUPERFAMILY SSF52540 212 461 2.5E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SUPERFAMILY SSF52540 17 203 4.47E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SUPERFAMILY SSF47819 535 611 1.11E-25 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Pfam PF09382 RQC domain 410 518 5.4E-38 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 SMART SM00487 26 222 3.7E-28 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Gene3D G3DSA:1.10.150.80 528 611 4.2E-28 T 15-10-2018 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 4.9E-189 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VIBNI_A3799 26de76fff790a50a78fa56fab57c0d64 612 Pfam PF16124 RecQ zinc-binding 347 408 4.4E-18 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 195 2.4E-36 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 427 572 1.1E-24 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Gene3D G3DSA:3.40.50.1220 214 386 1.6E-40 T 15-10-2018 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 615 2.3E-259 T 15-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Gene3D G3DSA:3.40.50.970 387 605 1.0E-35 T 15-10-2018 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 SUPERFAMILY SSF52518 1 210 4.05E-30 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 SUPERFAMILY SSF52518 395 596 1.59E-40 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 9.8E-35 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 Gene3D G3DSA:3.40.50.970 3 210 3.6E-31 T 15-10-2018 VIBNI_A2158 5e269919a3448e8603eeb09185615ceb 618 SUPERFAMILY SSF52467 181 379 1.87E-45 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.8E-123 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Gene3D G3DSA:3.50.30.10 4 233 5.1E-81 T 15-10-2018 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 4.7E-245 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 8.2E-33 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 PIRSF PIRSF000732 1 574 1.1E-218 T 15-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 SUPERFAMILY SSF52009 125 244 8.76E-35 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 SUPERFAMILY SSF51621 249 549 2.07E-110 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 SUPERFAMILY SSF47831 24 143 2.75E-33 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.0E-20 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Gene3D G3DSA:3.20.20.60 234 575 1.3E-125 T 15-10-2018 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 Gene3D G3DSA:1.10.274.10 21 146 5.1E-81 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.3E-30 T 15-10-2018 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.3E-30 T 15-10-2018 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.3E-30 T 15-10-2018 VIBNI_A2628 3d644be44b86e42467374a322a2a49b2 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.3E-30 T 15-10-2018 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 503 2.9E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 Gene3D G3DSA:3.30.450.20 33 185 2.4E-29 T 15-10-2018 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 SMART SM01049 30 124 1.6E-16 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 SUPERFAMILY SSF58104 234 539 1.22E-69 T 15-10-2018 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 Gene3D G3DSA:1.10.287.950 217 540 2.3E-64 T 15-10-2018 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 5.9E-25 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 5.9E-25 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 5.9E-25 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 SMART SM00283 277 538 4.3E-72 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0043 5a7ab8b2836e1d1c968b1c41c06c228e 541 Pfam PF17200 Single Cache domain 2 36 186 6.6E-35 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 Pfam PF00005 ABC transporter 20 164 1.6E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 Gene3D G3DSA:3.40.50.300 1 240 2.4E-75 T 15-10-2018 VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 SUPERFAMILY SSF50331 264 342 3.68E-8 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 SUPERFAMILY SSF52540 5 243 9.05E-79 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 SMART SM00382 29 214 1.6E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2832 d9ef28ce62a912e1417d7fb6355c5e28 342 Pfam PF08402 TOBE domain 276 342 4.9E-5 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PIRSF PIRSF019574 1 347 1.3E-124 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 Gene3D G3DSA:3.40.190.10 31 314 1.9E-120 T 15-10-2018 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 292 318 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 4.8E-82 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 Pfam PF13416 Bacterial extracellular solute-binding protein 42 313 3.0E-41 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 Gene3D G3DSA:3.40.190.10 131 320 1.9E-120 T 15-10-2018 VIBNI_A1726 39a40fb02c2d6bf2bb43bd0f73697a7b 347 SUPERFAMILY SSF53850 26 344 2.92E-94 T 15-10-2018 VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 6.8E-35 T 15-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 SUPERFAMILY SSF51735 2 166 3.86E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 Gene3D G3DSA:3.40.50.720 1 167 9.0E-51 T 15-10-2018 VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 Gene3D G3DSA:1.10.1040.10 168 297 2.4E-41 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 2.9E-29 T 15-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 SUPERFAMILY SSF48179 168 291 1.09E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0554 ab298c89246b108bdaa8059d7fd86003 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 7.1E-83 T 15-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 150 3.8E-29 T 15-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 SUPERFAMILY SSF69737 71 138 2.49E-23 T 15-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 Pfam PF02814 UreE urease accessory protein, N-terminal domain 14 65 1.2E-9 T 15-10-2018 IPR004029 UreE urease accessory, N-terminal VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 Gene3D G3DSA:3.30.70.790 72 143 7.3E-32 T 15-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 PIRSF PIRSF036402 3 150 4.3E-42 T 15-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 SMART SM00988 1 65 5.6E-10 T 15-10-2018 IPR004029 UreE urease accessory, N-terminal VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 Gene3D G3DSA:2.60.260.20 1 70 2.6E-19 T 15-10-2018 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 22.175 T 15-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 VIBNI_B0597 15aedde9b03c2d41835c4a987213239d 150 SUPERFAMILY SSF69287 11 71 5.49E-13 T 15-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.3E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.3E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.3E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.3E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 Gene3D G3DSA:1.10.10.10 2 157 4.7E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 SMART SM00347 44 145 1.4E-22 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 SUPERFAMILY SSF46785 15 156 1.35E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0266 ab9e0147489d97ea59d84c849acc1f83 161 Pfam PF12802 MarR family 50 109 6.1E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 Gene3D G3DSA:3.40.50.2300 160 297 5.4E-23 T 15-10-2018 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 Pfam PF00072 Response regulator receiver domain 172 286 9.7E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 SMART SM00260 8 144 2.1E-18 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 SUPERFAMILY SSF50341 8 148 6.28E-30 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 Gene3D G3DSA:2.40.50.180 30 139 3.9E-24 T 15-10-2018 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 Pfam PF01584 CheW-like domain 11 146 2.7E-29 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 SUPERFAMILY SSF52172 168 289 3.84E-22 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 Gene3D G3DSA:2.30.30.40 14 138 3.9E-24 T 15-10-2018 VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 PIRSF PIRSF002867 1 295 2.9E-86 T 15-10-2018 IPR024181 Chemotaxis response regulator CheV VIBNI_B0862 03b30dbfd7661cccd8d9da17cae2824e 301 SMART SM00448 170 287 4.7E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0720 812e8fd7cf40a4857f2c568e7df60488 306 Pfam PF13407 Periplasmic binding protein domain 32 278 1.0E-53 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0720 812e8fd7cf40a4857f2c568e7df60488 306 Gene3D G3DSA:3.40.50.2300 129 300 1.6E-72 T 15-10-2018 VIBNI_B0720 812e8fd7cf40a4857f2c568e7df60488 306 Gene3D G3DSA:3.40.50.2300 37 289 1.6E-72 T 15-10-2018 VIBNI_B0720 812e8fd7cf40a4857f2c568e7df60488 306 SUPERFAMILY SSF53822 12 302 1.11E-71 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0404 99af661355ce4359810144d521792ab0 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.133 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VIBNI_A0404 99af661355ce4359810144d521792ab0 303 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.4E-124 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 6.4E-60 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.8E-51 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.8E-51 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.8E-51 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.8E-51 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.8E-51 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 Gene3D G3DSA:3.30.1360.80 1 172 3.7E-71 T 15-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 8.0E-68 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 PIRSF PIRSF006160 1 162 6.3E-66 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 SUPERFAMILY SSF63411 4 162 3.94E-65 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0160 2afde0b2985d880cdc44cd2364cccea6 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.99 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 Pfam PF08447 PAS fold 31 114 8.6E-18 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 SUPERFAMILY SSF55785 22 114 1.16E-23 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 Gene3D G3DSA:1.10.287.950 188 517 3.8E-66 T 15-10-2018 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 SMART SM00283 255 516 1.0E-66 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 483 1.3E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 109 3.4E-11 T 15-10-2018 IPR000014 PAS domain VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 6.2E-7 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 269 298 6.2E-7 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 SUPERFAMILY SSF58104 221 517 5.75E-71 T 15-10-2018 VIBNI_A1574 79c6805c442f112a48b7b3be8ca69fa4 518 Gene3D G3DSA:3.30.450.20 11 116 1.0E-21 T 15-10-2018 VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:2.60.40.10 50 131 6.5E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:3.80.10.10 342 559 7.6E-13 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:3.80.10.10 763 862 1.5E-15 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:3.80.10.10 560 762 8.0E-41 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SUPERFAMILY SSF52058 559 839 2.72E-31 T 15-10-2018 VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SUPERFAMILY SSF52058 367 567 1.87E-5 T 15-10-2018 VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SUPERFAMILY SSF49299 230 322 2.67E-7 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:2.60.40.3010 144 227 9.6E-17 T 15-10-2018 VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 Gene3D G3DSA:2.60.40.3010 236 321 2.5E-22 T 15-10-2018 VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SMART SM00089 234 323 0.0018 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SMART SM00089 50 133 3.9 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0030 4bea22ecf7b426a6fe6bae713eae412d 877 SMART SM00089 141 230 0.55 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A3536 1a322f1c0b8787d59babc40f7db91995 201 ProSitePatterns PS00501 Signal peptidases I serine active site. 117 124 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VIBNI_A3536 1a322f1c0b8787d59babc40f7db91995 201 Gene3D G3DSA:2.10.109.10 74 200 5.0E-13 T 15-10-2018 VIBNI_A3536 1a322f1c0b8787d59babc40f7db91995 201 SUPERFAMILY SSF51306 66 197 1.07E-25 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VIBNI_A3536 1a322f1c0b8787d59babc40f7db91995 201 Pfam PF00717 Peptidase S24-like 115 180 4.4E-13 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VIBNI_A3536 1a322f1c0b8787d59babc40f7db91995 201 Gene3D G3DSA:1.10.260.40 2 56 3.1E-6 T 15-10-2018 VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 Gene3D G3DSA:1.10.10.10 118 184 5.4E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 Gene3D G3DSA:1.10.1740.10 5 113 4.2E-25 T 15-10-2018 VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 SUPERFAMILY SSF88946 5 105 4.4E-26 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 Pfam PF04542 Sigma-70 region 2 29 96 6.1E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 Pfam PF08281 Sigma-70, region 4 125 177 7.2E-12 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 SUPERFAMILY SSF88659 115 181 1.2E-11 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A1017 cf41098275278c0375cb0f38e7fd0b56 220 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 181 9.0E-24 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_B1968 d2048490344b2b3a954ba81cf72cf45c 68 SMART SM00530 11 66 2.3E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1968 d2048490344b2b3a954ba81cf72cf45c 68 Pfam PF01381 Helix-turn-helix 12 66 1.7E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1968 d2048490344b2b3a954ba81cf72cf45c 68 Gene3D G3DSA:1.10.260.40 1 68 1.1E-21 T 15-10-2018 VIBNI_B1968 d2048490344b2b3a954ba81cf72cf45c 68 SUPERFAMILY SSF47413 3 67 4.22E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A0339 d2048490344b2b3a954ba81cf72cf45c 68 SMART SM00530 11 66 2.3E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A0339 d2048490344b2b3a954ba81cf72cf45c 68 Pfam PF01381 Helix-turn-helix 12 66 1.7E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A0339 d2048490344b2b3a954ba81cf72cf45c 68 Gene3D G3DSA:1.10.260.40 1 68 1.1E-21 T 15-10-2018 VIBNI_A0339 d2048490344b2b3a954ba81cf72cf45c 68 SUPERFAMILY SSF47413 3 67 4.22E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A3380 941f91043f8be478a54f463b1c1efcf4 312 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 33 312 2.2E-68 T 15-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VIBNI_A3380 941f91043f8be478a54f463b1c1efcf4 312 Gene3D G3DSA:2.30.30.830 115 182 4.6E-28 T 15-10-2018 VIBNI_A3380 941f91043f8be478a54f463b1c1efcf4 312 SUPERFAMILY SSF50156 213 311 1.04E-16 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A3380 941f91043f8be478a54f463b1c1efcf4 312 Pfam PF11356 Type II secretion system protein C 35 181 5.0E-41 T 15-10-2018 IPR024961 Type II secretion system protein C, N-terminal VIBNI_A3380 941f91043f8be478a54f463b1c1efcf4 312 Gene3D G3DSA:2.30.42.10 210 312 3.6E-27 T 15-10-2018 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 Gene3D G3DSA:3.10.20.30 1 106 6.1E-36 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 SUPERFAMILY SSF54292 5 106 6.42E-31 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.4E-95 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 5.8E-34 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 Gene3D G3DSA:1.10.1060.10 107 244 3.2E-49 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 3.4E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A3237 12e3b096626150c0cd5558befec94ae3 252 SUPERFAMILY SSF46548 107 225 3.49E-30 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 Pfam PF00005 ABC transporter 359 509 3.3E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 SUPERFAMILY SSF52540 332 577 4.37E-91 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 Gene3D G3DSA:3.40.50.300 329 580 9.9E-91 T 15-10-2018 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 Pfam PF00664 ABC transporter transmembrane region 29 290 5.2E-53 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 SMART SM00382 368 555 1.5E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 SUPERFAMILY SSF90123 9 327 5.76E-77 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 Gene3D G3DSA:1.20.1560.10 2 328 2.3E-82 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A2558 035e0b2357f702f1d0e532275445e3cf 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 577 2.8E-215 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VIBNI_A2541 1e237ca95b32ac9cfb323be635666f84 306 SUPERFAMILY SSF161098 102 289 2.49E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2541 1e237ca95b32ac9cfb323be635666f84 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 30 74 3.2E-12 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_A2541 1e237ca95b32ac9cfb323be635666f84 306 Gene3D G3DSA:1.10.3720.10 98 303 4.6E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2541 1e237ca95b32ac9cfb323be635666f84 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 303 4.0E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 2.2E-35 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:1.10.287.610 2 69 1.0E-25 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:2.40.50.140 319 391 8.3E-34 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF14520 Helix-hairpin-helix domain 447 502 2.1E-5 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 15-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 3.4E-13 T 15-10-2018 IPR001357 BRCT domain VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.7E-10 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:3.30.470.90 70 318 1.0E-99 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00532 4 449 8.2E-276 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:2.20.70.80 392 432 1.7E-19 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00292 595 670 3.8E-10 T 15-10-2018 IPR001357 BRCT domain VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 PIRSF PIRSF001604 1 670 1.4E-250 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SUPERFAMILY SSF52113 593 669 3.11E-18 T 15-10-2018 IPR036420 BRCT domain superfamily VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 1.5E-263 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:1.10.150.20 507 584 6.1E-29 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 1.8E-131 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00278 516 532 1700.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00278 545 564 110.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00278 481 500 190.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SMART SM00278 447 466 23.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:3.40.50.10190 585 670 1.8E-25 T 15-10-2018 IPR036420 BRCT domain superfamily VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SUPERFAMILY SSF56091 3 317 1.3E-122 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Pfam PF12826 Helix-hairpin-helix motif 511 574 6.2E-23 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Gene3D G3DSA:1.10.150.20 433 506 6.6E-29 T 15-10-2018 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.156 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SUPERFAMILY SSF47781 404 586 7.41E-61 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A2621 2f945da3c25f9448f6f909910cab65c4 671 SUPERFAMILY SSF50249 319 400 1.71E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 PIRSF PIRSF003107 4 223 1.4E-70 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 Pfam PF01895 PhoU domain 128 210 1.7E-16 T 15-10-2018 IPR026022 PhoU domain VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 Pfam PF01895 PhoU domain 23 109 5.7E-23 T 15-10-2018 IPR026022 PhoU domain VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 SUPERFAMILY SSF109755 10 226 1.26E-70 T 15-10-2018 VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 Gene3D G3DSA:1.20.58.220 1 119 1.9E-41 T 15-10-2018 IPR038078 PhoU-like domain superfamily VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 Gene3D G3DSA:1.20.58.220 122 231 1.7E-33 T 15-10-2018 IPR038078 PhoU-like domain superfamily VIBNI_A0413 c9c4d79285322178980b729a7dcaf488 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.5E-75 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 Gene3D G3DSA:3.40.50.720 1 256 1.0E-83 T 15-10-2018 VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.0E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.0E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.0E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 1.4E-67 T 15-10-2018 VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 SUPERFAMILY SSF51735 7 255 4.28E-81 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2697 f4040537bcc88d932994f72669dbbb56 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 SUPERFAMILY SSF53383 17 436 4.71E-102 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Gene3D G3DSA:3.40.640.10 522 748 4.1E-58 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Gene3D G3DSA:3.40.640.10 95 353 4.5E-105 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Gene3D G3DSA:3.90.1150.10 760 896 5.8E-42 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Pfam PF01212 Beta-eliminating lyase 537 679 3.0E-8 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.568 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 SUPERFAMILY SSF53383 444 947 2.7E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0814 b4576a0a5090c5c5a04ff75383bd123a 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 5.7E-180 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 308 1.0E-99 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 PIRSF PIRSF000535 1 310 4.6E-94 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 308 1.8E-100 T 15-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 SUPERFAMILY SSF53613 5 293 1.71E-68 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 Gene3D G3DSA:3.40.1190.20 1 310 1.9E-91 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B0824 d82f3db73180f5ed575d57f75a2e5268 315 Pfam PF00294 pfkB family carbohydrate kinase 21 293 4.8E-53 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.4E-134 T 15-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 Gene3D G3DSA:3.40.1690.10 218 358 4.7E-58 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 SUPERFAMILY SSF160544 250 355 1.7E-40 T 15-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 9.9E-122 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.2E-39 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.2E-39 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.2E-39 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.2E-39 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_A0736 1408243b3e706c5d542067556faec5bd 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.2E-39 T 15-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 Pfam PF13377 Periplasmic binding protein-like domain 173 338 2.3E-37 T 15-10-2018 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 SUPERFAMILY SSF47413 7 61 5.12E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 SMART SM00354 6 76 9.4E-29 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 Gene3D G3DSA:3.40.50.2300 66 309 3.4E-75 T 15-10-2018 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 6.8E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 SUPERFAMILY SSF53822 65 340 3.0E-74 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 Gene3D G3DSA:1.10.260.40 5 62 2.6E-18 T 15-10-2018 VIBNI_B0300 070c3ce41214f70d14e49cfcb1a65f74 343 Gene3D G3DSA:3.40.50.2300 165 294 3.4E-75 T 15-10-2018 VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 SUPERFAMILY SSF55785 18 115 1.01E-26 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 SMART SM00086 79 121 1.1E-4 T 15-10-2018 IPR001610 PAC motif VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 SMART SM00091 5 73 0.0092 T 15-10-2018 IPR000014 PAS domain VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 Pfam PF13426 PAS domain 16 114 1.2E-12 T 15-10-2018 IPR000014 PAS domain VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 Gene3D G3DSA:3.30.450.20 1 115 6.3E-28 T 15-10-2018 VIBNI_B0138 9841811ca9b67cb3818a617c9013769f 142 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 116 1.4E-14 T 15-10-2018 IPR000014 PAS domain VIBNI_A0863 b8540a8cc0a4e40f4ef6121c28acc8f0 229 SUPERFAMILY SSF50800 3 227 1.2E-73 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_A0863 b8540a8cc0a4e40f4ef6121c28acc8f0 229 Pfam PF03475 3-alpha domain 173 215 9.5E-9 T 15-10-2018 IPR005163 3-alpha domain VIBNI_A0863 b8540a8cc0a4e40f4ef6121c28acc8f0 229 Gene3D G3DSA:2.40.33.20 1 229 4.0E-76 T 15-10-2018 VIBNI_A0863 b8540a8cc0a4e40f4ef6121c28acc8f0 229 Pfam PF03473 MOSC domain 49 163 9.2E-22 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VIBNI_B0097 3a75d73d5ba7bbc9a635821bf360d55f 201 SUPERFAMILY SSF69593 6 150 3.92E-29 T 15-10-2018 VIBNI_B0097 3a75d73d5ba7bbc9a635821bf360d55f 201 SMART SM00563 33 149 2.6E-28 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_B0097 3a75d73d5ba7bbc9a635821bf360d55f 201 Pfam PF01553 Acyltransferase 18 146 1.9E-27 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 1.2E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 SUPERFAMILY SSF55347 124 284 4.09E-30 T 15-10-2018 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 9.6E-130 T 15-10-2018 IPR030827 Inositol 2-dehydrogenase VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 236 9.0E-8 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 Gene3D G3DSA:3.30.360.10 138 268 1.4E-94 T 15-10-2018 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 Gene3D G3DSA:3.40.50.720 5 321 1.4E-94 T 15-10-2018 VIBNI_A2174 5cad54b70e8fccfadaeec99023fba8a4 329 SUPERFAMILY SSF51735 2 141 1.21E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 Gene3D G3DSA:1.10.287.950 216 547 2.4E-69 T 15-10-2018 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 SMART SM00283 285 546 1.4E-66 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 Gene3D G3DSA:3.30.450.20 38 193 9.3E-61 T 15-10-2018 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 Pfam PF17200 Single Cache domain 2 41 191 4.1E-43 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 SMART SM00304 216 270 5.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 SMART SM01049 38 132 5.0E-40 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 SUPERFAMILY SSF58104 238 547 1.24E-71 T 15-10-2018 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 Pfam PF00672 HAMP domain 217 266 3.5E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3309 2552d056bb5b9fc19151b5ff4486bcd7 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 508 1.1E-40 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.7E-26 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.175 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 15-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 SMART SM00987 49 210 8.8E-40 T 15-10-2018 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 Gene3D G3DSA:3.40.470.10 1 225 1.6E-105 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 SMART SM00986 49 210 8.8E-40 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 211 2.6E-86 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A0294 90392edabee46da5101e3639d49f4e6c 225 SUPERFAMILY SSF52141 6 221 6.11E-96 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A1524 7cc832589b5186a2f373495543572a1e 299 SUPERFAMILY SSF81301 16 89 2.57E-5 T 15-10-2018 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.6E-58 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 SMART SM00562 3 140 1.1E-91 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.5E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.5E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.5E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.5E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.5E-40 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 SUPERFAMILY SSF54919 1 140 8.51E-62 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 Gene3D G3DSA:3.30.70.141 1 143 1.3E-60 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A2779 a2991b1e69ef79da763244b80b694bae 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.359 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 SUPERFAMILY SSF56601 189 568 1.23E-91 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 223 6.6E-19 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Gene3D G3DSA:3.30.450.330 238 562 2.6E-105 T 15-10-2018 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Gene3D G3DSA:3.90.1310.30 61 236 2.7E-44 T 15-10-2018 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 558 2.7E-78 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 SUPERFAMILY SSF56519 65 236 2.88E-45 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 21 573 44.996 T 15-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A0223 6b6f8c921a267da1bba12643a5209e73 575 Gene3D G3DSA:3.40.710.10 298 480 2.6E-105 T 15-10-2018 VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 204 9.1E-80 T 15-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 SUPERFAMILY SSF52833 1 89 9.68E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 SUPERFAMILY SSF47616 80 203 5.73E-32 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 Gene3D G3DSA:3.40.30.10 1 87 7.5E-26 T 15-10-2018 VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 137 186 9.6E-6 T 15-10-2018 VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 Gene3D G3DSA:1.20.1050.10 88 204 1.9E-47 T 15-10-2018 VIBNI_B0470 b664ac43655468750bf11bf433c27de4 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 5.0E-18 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_A0539 b50478f2244baf90b193bd1f2c8b2799 391 Gene3D G3DSA:3.40.640.10 70 293 1.2E-121 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A0539 b50478f2244baf90b193bd1f2c8b2799 391 Gene3D G3DSA:3.90.1150.10 13 384 1.2E-121 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A0539 b50478f2244baf90b193bd1f2c8b2799 391 SUPERFAMILY SSF53383 2 388 3.99E-92 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A0539 b50478f2244baf90b193bd1f2c8b2799 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 386 5.0E-113 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VIBNI_A0539 b50478f2244baf90b193bd1f2c8b2799 391 Pfam PF00155 Aminotransferase class I and II 36 384 7.1E-44 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A3487 6d11df90bd9c4e73c65668eb15e62d5a 314 Pfam PF05036 Sporulation related domain 68 138 1.3E-4 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_A3487 6d11df90bd9c4e73c65668eb15e62d5a 314 SUPERFAMILY SSF110997 68 138 1.96E-6 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A0522 a84ce1072508b52c8d7bbf1bf81228b2 554 Pfam PF00733 Asparagine synthase 219 294 1.7E-5 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VIBNI_A0522 a84ce1072508b52c8d7bbf1bf81228b2 554 Gene3D G3DSA:3.40.50.620 206 325 1.6E-12 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0522 a84ce1072508b52c8d7bbf1bf81228b2 554 SUPERFAMILY SSF56235 90 203 6.08E-10 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0522 a84ce1072508b52c8d7bbf1bf81228b2 554 Gene3D G3DSA:3.60.20.10 58 205 8.0E-8 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0522 a84ce1072508b52c8d7bbf1bf81228b2 554 SUPERFAMILY SSF52402 199 310 1.07E-12 T 15-10-2018 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.981 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PIRSF PIRSF500210 1 336 2.4E-129 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PIRSF PIRSF000904 1 336 1.4E-126 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 7.6E-77 T 15-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 Gene3D G3DSA:3.40.190.80 200 336 5.1E-60 T 15-10-2018 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.9E-77 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 SUPERFAMILY SSF56655 3 331 2.96E-113 T 15-10-2018 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 15-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VIBNI_A3060 31db9db228323ef1225df733fb2c492e 336 Gene3D G3DSA:3.30.540.10 4 198 1.1E-76 T 15-10-2018 VIBNI_B1952 c98ad2661c12d09c5797c0eded697aea 267 Gene3D G3DSA:3.90.850.10 1 267 3.0E-82 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B1952 c98ad2661c12d09c5797c0eded697aea 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 85 260 4.1E-6 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_B1952 c98ad2661c12d09c5797c0eded697aea 267 SUPERFAMILY SSF56529 2 267 2.75E-76 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B1952 c98ad2661c12d09c5797c0eded697aea 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.5E-135 T 15-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 VIBNI_A0520 ef6c8d85d4e5ca8ad32b501106993197 343 SUPERFAMILY SSF111369 66 233 6.41E-11 T 15-10-2018 VIBNI_A0520 ef6c8d85d4e5ca8ad32b501106993197 343 Gene3D G3DSA:1.10.287.470 97 186 1.5E-29 T 15-10-2018 VIBNI_A0520 ef6c8d85d4e5ca8ad32b501106993197 343 Gene3D G3DSA:2.40.50.100 65 216 1.5E-29 T 15-10-2018 VIBNI_A0520 ef6c8d85d4e5ca8ad32b501106993197 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 281 6.7E-11 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A0520 ef6c8d85d4e5ca8ad32b501106993197 343 Gene3D G3DSA:2.40.30.170 218 283 1.5E-29 T 15-10-2018 VIBNI_A2141 9b04f6d0331f21254f6b9ab3c254d9a9 381 Pfam PF08007 Cupin superfamily protein 9 311 7.1E-90 T 15-10-2018 IPR003347 JmjC domain VIBNI_A2141 9b04f6d0331f21254f6b9ab3c254d9a9 381 SMART SM00558 93 222 1.5E-4 T 15-10-2018 IPR003347 JmjC domain VIBNI_A2141 9b04f6d0331f21254f6b9ab3c254d9a9 381 Gene3D G3DSA:1.10.10.2510 208 380 1.6E-43 T 15-10-2018 VIBNI_A2141 9b04f6d0331f21254f6b9ab3c254d9a9 381 SUPERFAMILY SSF51197 6 294 5.22E-76 T 15-10-2018 VIBNI_A2141 9b04f6d0331f21254f6b9ab3c254d9a9 381 Gene3D G3DSA:2.60.120.650 1 207 2.8E-75 T 15-10-2018 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 Gene3D G3DSA:3.30.420.40 3 195 3.9E-71 T 15-10-2018 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 SUPERFAMILY SSF53067 5 196 6.04E-65 T 15-10-2018 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 172.308 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PIRSF PIRSF000722 2 397 2.6E-140 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 Gene3D G3DSA:3.30.420.40 196 397 5.2E-75 T 15-10-2018 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 4.6E-151 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 173 186 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 321 337 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 378 390 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 299 312 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 PRINTS PR00471 Acetate kinase family signature 203 224 2.3E-47 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 Pfam PF00871 Acetokinase family 6 391 3.6E-148 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_B1211 7752468b919715314c32c90df79799f6 397 SUPERFAMILY SSF53067 158 396 5.09E-82 T 15-10-2018 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 SUPERFAMILY SSF52518 1 179 2.78E-64 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.1E-58 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 SUPERFAMILY SSF52467 190 363 1.46E-62 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 4.7E-271 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 330 5.6E-45 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Gene3D G3DSA:3.40.50.970 1 179 7.1E-74 T 15-10-2018 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 8.8E-50 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Gene3D G3DSA:3.40.50.970 364 573 2.1E-65 T 15-10-2018 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 Gene3D G3DSA:3.40.50.1220 191 361 3.7E-59 T 15-10-2018 VIBNI_A2889 15b6c22591716b07196e6e1eb49c3d72 573 SUPERFAMILY SSF52518 373 566 6.82E-68 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 SUPERFAMILY SSF48452 348 440 5.52E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 SMART SM00028 391 424 0.0021 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 Gene3D G3DSA:1.25.40.10 344 449 3.7E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 Pfam PF13519 von Willebrand factor type A domain 88 194 8.0E-14 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 Gene3D G3DSA:3.40.50.410 86 280 5.3E-29 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B1640 eb7d9d345912364dd441e3d312e85d5e 604 SUPERFAMILY SSF53300 88 266 1.29E-15 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Gene3D G3DSA:2.40.30.10 338 393 8.1E-30 T 15-10-2018 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Gene3D G3DSA:2.40.30.10 206 334 1.4E-51 T 15-10-2018 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.4E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Gene3D G3DSA:3.40.50.300 1 203 1.8E-70 T 15-10-2018 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.1E-15 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.1E-230 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 SUPERFAMILY SSF50465 298 393 2.88E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 SUPERFAMILY SSF52540 6 219 9.2E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 SUPERFAMILY SSF50447 205 301 1.75E-28 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.485 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3182 3c2a78b838195d3ab6d6c1e65324c372 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 Gene3D G3DSA:3.20.70.20 121 687 5.7E-229 T 15-10-2018 VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 2.0E-198 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 8.8E-178 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 SUPERFAMILY SSF51998 121 687 5.04E-190 T 15-10-2018 VIBNI_B1170 86478a6fa8a7bdcbf003b02cf7d57501 706 Pfam PF03477 ATP cone domain 4 89 4.1E-21 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VIBNI_A1501 444160050f2f9ce2cdb01a9a17a6f0b8 364 Gene3D G3DSA:3.40.50.2300 139 286 1.1E-54 T 15-10-2018 VIBNI_A1501 444160050f2f9ce2cdb01a9a17a6f0b8 364 Pfam PF13407 Periplasmic binding protein domain 43 302 5.9E-46 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1501 444160050f2f9ce2cdb01a9a17a6f0b8 364 Gene3D G3DSA:3.40.50.2300 49 301 1.1E-54 T 15-10-2018 VIBNI_A1501 444160050f2f9ce2cdb01a9a17a6f0b8 364 SUPERFAMILY SSF53822 40 347 6.48E-53 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 8.3E-301 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Gene3D G3DSA:3.40.50.300 72 379 1.9E-115 T 15-10-2018 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 7.7E-46 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 SUPERFAMILY SSF52540 10 277 2.81E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Gene3D G3DSA:3.40.50.300 110 275 1.9E-115 T 15-10-2018 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 5.8E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Gene3D G3DSA:3.30.70.3280 390 529 5.6E-53 T 15-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.141 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 SUPERFAMILY SSF54980 393 468 1.76E-17 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.9E-47 T 15-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 SUPERFAMILY SSF50447 262 393 1.79E-26 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A0463 95ed74bc05b544e5367f5bed9bdcb763 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-8 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.7E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.7E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.7E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.7E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.7E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 SUPERFAMILY SSF53067 154 340 4.07E-50 T 15-10-2018 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 Gene3D G3DSA:3.30.420.40 158 321 1.1E-131 T 15-10-2018 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 Pfam PF06723 MreB/Mbl protein 11 338 7.1E-149 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 Gene3D G3DSA:3.30.420.40 14 331 1.1E-131 T 15-10-2018 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 SUPERFAMILY SSF53067 9 152 1.46E-37 T 15-10-2018 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.8E-166 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VIBNI_A2986 1f28e71ddc55b6c02e3cc11a980062ce 347 Gene3D G3DSA:3.90.640.10 190 263 1.1E-131 T 15-10-2018 VIBNI_A0733 f83279d145403074811630624ad94c61 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 3.6E-66 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 Pfam PF00813 FliP family 92 283 1.5E-78 T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 8.5E-19 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 15-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VIBNI_A0733 f83279d145403074811630624ad94c61 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 2.3E-81 T 15-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VIBNI_A1986 add1df847cb7a76a8c0e1667dd75a941 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.3E-55 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VIBNI_A1986 add1df847cb7a76a8c0e1667dd75a941 453 Pfam PF03313 Serine dehydratase alpha chain 186 448 1.5E-96 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VIBNI_A1986 add1df847cb7a76a8c0e1667dd75a941 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.5E-221 T 15-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VIBNI_A1986 add1df847cb7a76a8c0e1667dd75a941 453 SUPERFAMILY SSF143548 16 158 1.96E-44 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VIBNI_A1986 add1df847cb7a76a8c0e1667dd75a941 453 Gene3D G3DSA:3.30.1330.90 10 159 5.5E-52 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Gene3D G3DSA:4.10.1250.10 236 284 9.4E-20 T 15-10-2018 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 SUPERFAMILY SSF103025 8 284 2.2E-87 T 15-10-2018 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Gene3D G3DSA:3.30.1360.120 10 234 7.6E-83 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Gene3D G3DSA:2.40.30.110 287 364 7.3E-29 T 15-10-2018 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 SUPERFAMILY SSF101790 281 374 6.7E-26 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 257 3.1E-85 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Gene3D G3DSA:3.30.70.1400 59 142 7.6E-83 T 15-10-2018 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 369 1.4E-106 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 365 1.7E-21 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VIBNI_B0818 a5607136a8c2ca2f180c6bfd747fa3ba 375 PIRSF PIRSF006487 1 375 5.2E-79 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 496 1.2E-38 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 Gene3D G3DSA:1.10.287.950 212 544 1.9E-76 T 15-10-2018 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 Pfam PF00672 HAMP domain 217 262 9.2E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 SMART SM00304 212 266 4.7E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 162 4.7E-15 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 2.2E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 2.2E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 2.2E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 2.2E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 SUPERFAMILY SSF58104 239 543 5.49E-73 T 15-10-2018 VIBNI_A2138 2ea5d8fe61c67d97d4a8a17a5229fb90 544 SMART SM00283 281 542 2.5E-60 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 SUPERFAMILY SSF56104 14 344 1.63E-66 T 15-10-2018 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 Gene3D G3DSA:3.30.470.20 129 284 9.2E-36 T 15-10-2018 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 Pfam PF01259 SAICAR synthetase 22 293 1.9E-46 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 6.0E-215 T 15-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 Gene3D G3DSA:3.30.200.20 12 128 2.7E-24 T 15-10-2018 VIBNI_A1162 f4fd799b0743a0694723667ed02fb278 368 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.389 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Gene3D G3DSA:1.10.8.60 198 271 1.3E-12 T 15-10-2018 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 SUPERFAMILY SSF46689 347 400 8.51E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Gene3D G3DSA:1.10.10.60 344 400 4.5E-15 T 15-10-2018 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 379 395 7.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 364 379 7.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Pfam PF12833 Helix-turn-helix domain 318 396 5.4E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 SUPERFAMILY SSF46689 295 341 6.27E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Pfam PF14532 Sigma-54 interaction domain 45 184 2.0E-13 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Gene3D G3DSA:1.10.10.60 293 343 2.0E-9 T 15-10-2018 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 SUPERFAMILY SSF52540 43 262 4.73E-22 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 SMART SM00342 311 395 7.6E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3109 3547df5a9b59937350108221c10bb8e3 408 Gene3D G3DSA:3.40.50.300 43 197 8.9E-20 T 15-10-2018 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Gene3D G3DSA:1.10.10.160 108 181 8.8E-99 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Gene3D G3DSA:3.40.50.300 274 634 2.4E-124 T 15-10-2018 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Gene3D G3DSA:3.40.50.300 4 266 8.8E-99 T 15-10-2018 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Gene3D G3DSA:1.10.486.10 377 546 2.4E-124 T 15-10-2018 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.54 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.7E-74 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 SUPERFAMILY SSF52540 1 640 1.48E-161 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3494 cf2ca4f66f5edac82bb6315644fbff28 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.8E-76 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 SUPERFAMILY SSF46785 7 68 6.33E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 SUPERFAMILY SSF54909 69 154 2.95E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 4.1E-15 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 SMART SM00344 8 115 1.6E-40 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.8E-16 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 Gene3D G3DSA:3.30.70.920 60 142 4.4E-32 T 15-10-2018 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 Gene3D G3DSA:1.10.10.10 4 59 2.9E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.2E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.2E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A3457 815672c47095cb0b9b8254efdf2cb886 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.2E-10 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 490 5.9E-53 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 701 0.0 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 702 51.512 T 15-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Gene3D G3DSA:3.40.50.720 301 495 3.4E-58 T 15-10-2018 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 615 688 4.5E-6 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 493 586 2.5E-25 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Gene3D G3DSA:1.10.1040.50 496 693 7.9E-71 T 15-10-2018 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 490 515 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 SUPERFAMILY SSF52096 4 301 1.56E-63 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 SUPERFAMILY SSF48179 610 702 1.45E-25 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 SUPERFAMILY SSF48179 493 592 2.3E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Gene3D G3DSA:3.90.226.10 2 300 1.7E-92 T 15-10-2018 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 205 3.6E-34 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A0766 3d98e834904e6d0662d9695345a516d1 705 SUPERFAMILY SSF51735 308 490 1.48E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 SUPERFAMILY SSF55021 325 421 4.58E-19 T 15-10-2018 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 Pfam PF00696 Amino acid kinase family 33 305 9.5E-49 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 33 476 5.6E-124 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 33 476 5.5E-124 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 PIRSF PIRSF000726 29 477 5.3E-130 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 Gene3D G3DSA:3.30.70.260 331 474 2.5E-48 T 15-10-2018 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 ProSitePatterns PS00324 Aspartokinase signature. 33 41 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 Gene3D G3DSA:1.20.120.1320 69 162 1.9E-99 T 15-10-2018 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 Gene3D G3DSA:3.30.70.260 337 410 2.5E-48 T 15-10-2018 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 SUPERFAMILY SSF55021 404 476 1.72E-16 T 15-10-2018 VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 SUPERFAMILY SSF53633 33 320 4.97E-76 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3035 a10938a4337f2927045c5ca4e3dad009 477 Gene3D G3DSA:3.40.1160.10 33 317 1.9E-99 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3698 3ae1f00c4d6346de44ad5ef90536ab4e 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3698 3ae1f00c4d6346de44ad5ef90536ab4e 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3698 3ae1f00c4d6346de44ad5ef90536ab4e 78 SUPERFAMILY SSF143800 2 76 1.33E-29 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3698 3ae1f00c4d6346de44ad5ef90536ab4e 78 Gene3D G3DSA:2.30.170.40 2 78 4.2E-32 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3698 3ae1f00c4d6346de44ad5ef90536ab4e 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.305 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_B0110 a503b13d2e7c95a8efce9a1899cc75d0 253 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0110 a503b13d2e7c95a8efce9a1899cc75d0 253 SMART SM00382 31 206 1.3E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0110 a503b13d2e7c95a8efce9a1899cc75d0 253 Pfam PF00005 ABC transporter 22 155 1.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0110 a503b13d2e7c95a8efce9a1899cc75d0 253 Gene3D G3DSA:3.40.50.300 5 242 5.2E-60 T 15-10-2018 VIBNI_B0110 a503b13d2e7c95a8efce9a1899cc75d0 253 SUPERFAMILY SSF52540 7 229 4.28E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 Pfam PF03466 LysR substrate binding domain 89 281 2.2E-21 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 SUPERFAMILY SSF46785 1 111 5.99E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.7E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 Gene3D G3DSA:1.10.10.10 1 83 1.2E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 SUPERFAMILY SSF53850 89 286 6.7E-28 T 15-10-2018 VIBNI_B0409 c4b31c067bf8496a7dc41d8c6c3676e2 295 Gene3D G3DSA:3.40.190.290 91 284 2.3E-24 T 15-10-2018 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 316 2.9E-19 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 Gene3D G3DSA:3.40.50.720 30 313 1.7E-85 T 15-10-2018 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 288 3.9E-51 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 Gene3D G3DSA:3.40.50.720 103 289 1.7E-85 T 15-10-2018 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 SUPERFAMILY SSF52283 6 134 5.1E-21 T 15-10-2018 VIBNI_A1552 e5a327bc69238db27f0cabbdb45bf371 322 SUPERFAMILY SSF51735 105 289 5.88E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 Gene3D G3DSA:3.40.50.300 1 239 9.4E-39 T 15-10-2018 VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 SMART SM00382 49 223 8.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 SUPERFAMILY SSF52540 28 230 2.61E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 Pfam PF00005 ABC transporter 40 172 2.5E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3641 0f67557eb3082e089ffa02c517ff46d1 395 Pfam PF14524 Wzt C-terminal domain 272 379 3.0E-11 T 15-10-2018 IPR029439 Wzt, C-terminal VIBNI_A1089 36eed6c1c5b112c9e9c06e79aac079de 644 SMART SM00763 19 380 2.5E-214 T 15-10-2018 IPR013153 PrkA AAA domain VIBNI_A1089 36eed6c1c5b112c9e9c06e79aac079de 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 5.4E-72 T 15-10-2018 IPR010650 PrkA C-terminal domain VIBNI_A1089 36eed6c1c5b112c9e9c06e79aac079de 644 PIRSF PIRSF000549 1 644 5.3E-286 T 15-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VIBNI_A1089 36eed6c1c5b112c9e9c06e79aac079de 644 Pfam PF08298 PrkA AAA domain 20 380 1.3E-173 T 15-10-2018 IPR013153 PrkA AAA domain VIBNI_A1089 36eed6c1c5b112c9e9c06e79aac079de 644 SUPERFAMILY SSF52540 73 368 9.66E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 597 7.0E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Pfam PF02743 Cache domain 91 261 2.3E-28 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 SMART SM00304 300 354 5.1E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 SMART SM00304 357 407 55.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Pfam PF00672 HAMP domain 304 349 5.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 SUPERFAMILY SSF58104 322 631 1.83E-75 T 15-10-2018 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 SMART SM00283 369 630 8.4E-67 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Gene3D G3DSA:1.10.287.950 302 631 1.2E-71 T 15-10-2018 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Gene3D G3DSA:3.30.450.20 59 271 2.5E-44 T 15-10-2018 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 SUPERFAMILY SSF103190 90 184 1.31E-12 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 2.8E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 467 494 2.8E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 496 525 2.8E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2671 e6c2d5860b7a082fb377b2738281e1df 631 Gene3D G3DSA:3.30.450.20 69 173 2.5E-44 T 15-10-2018 VIBNI_B0141 373f03c6c4dc40d0a8b245d2b4162b38 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 111 3.0E-13 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_B0141 373f03c6c4dc40d0a8b245d2b4162b38 134 Gene3D G3DSA:2.170.150.70 3 117 1.9E-16 T 15-10-2018 VIBNI_B0141 373f03c6c4dc40d0a8b245d2b4162b38 134 SUPERFAMILY SSF51316 1 132 1.88E-35 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_A2995 a2f21960568c9607d15aa11e5810e383 189 SUPERFAMILY SSF54523 7 82 1.73E-13 T 15-10-2018 VIBNI_A2995 a2f21960568c9607d15aa11e5810e383 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 1.6E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2995 a2f21960568c9607d15aa11e5810e383 189 Gene3D G3DSA:3.30.700.10 7 187 2.9E-11 T 15-10-2018 VIBNI_A2995 a2f21960568c9607d15aa11e5810e383 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.5E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Pfam PF08351 Domain of unknown function (DUF1726) 68 110 3.9E-6 T 15-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 671 39.873 T 15-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 SUPERFAMILY SSF55729 354 540 2.38E-12 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Pfam PF17176 tRNA-binding domain 565 671 6.0E-10 T 15-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Gene3D G3DSA:3.40.50.12320 173 332 4.9E-47 T 15-10-2018 VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 SUPERFAMILY SSF52540 147 281 1.16E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Gene3D G3DSA:3.40.630.30 335 538 1.1E-65 T 15-10-2018 VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Pfam PF05127 Helicase 175 342 8.5E-58 T 15-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Pfam PF13718 GNAT acetyltransferase 2 376 494 3.0E-19 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0004 ccb19447eec1a2604c750f700d4b4b42 676 Gene3D G3DSA:3.40.50.11040 2 114 3.9E-20 T 15-10-2018 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 52 3.5E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 SMART SM00354 5 75 1.8E-22 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 Gene3D G3DSA:3.40.50.2300 156 333 1.6E-45 T 15-10-2018 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 SUPERFAMILY SSF47413 5 63 1.71E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 SUPERFAMILY SSF53822 64 333 3.26E-58 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 Gene3D G3DSA:3.40.50.2300 62 153 3.8E-18 T 15-10-2018 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 Gene3D G3DSA:1.10.260.40 1 61 1.9E-20 T 15-10-2018 VIBNI_B0234 17cf620f398aad3b582aa24a72ba0a06 338 Pfam PF13377 Periplasmic binding protein-like domain 172 330 8.1E-29 T 15-10-2018 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SMART SM00388 469 534 4.1E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:1.20.58.920 181 322 4.8E-40 T 15-10-2018 IPR038188 TorS, sensor domain superfamily VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:1.20.58.920 47 178 5.5E-39 T 15-10-2018 IPR038188 TorS, sensor domain superfamily VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SUPERFAMILY SSF47384 457 535 7.26E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:3.30.565.10 533 697 5.9E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SUPERFAMILY SSF52172 712 839 9.25E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SUPERFAMILY SSF55874 523 697 9.95E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Pfam PF01627 Hpt domain 892 972 3.5E-12 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 2.0E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:1.20.120.160 862 977 1.3E-19 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 PIRSF PIRSF036437 1 977 0.0 T 15-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 4.7E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SMART SM00387 581 694 5.1E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Pfam PF00072 Response regulator receiver domain 715 832 6.7E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SMART SM00448 713 833 1.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 SUPERFAMILY SSF47226 868 975 2.09E-19 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:1.10.287.130 405 532 1.9E-27 T 15-10-2018 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 975 0.0 T 15-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_B1244 f4d76e0b4f7c288faeb2c3df6b77b5b3 978 Gene3D G3DSA:3.40.50.2300 707 840 5.5E-31 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SMART SM00823 Phosphopantetheine attachment site 1419 1487 8.3E-5 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF13193 AMP-binding enzyme C-terminal domain 2814 2886 3.6E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 44 210 4.89E-33 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.300.30 914 990 5.5E-12 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF47336 1411 1483 1.83E-19 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 1497 1689 5.23E-33 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.40.50.12780 2395 2798 1.3E-115 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 ProSitePatterns PS00455 Putative AMP-binding domain signature. 650 661 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.30 1662 1909 1.2E-46 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 216 462 8.67E-45 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.300.30 2801 2897 2.3E-31 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1787 1931 1.7E-23 T 15-10-2018 IPR010060 Non-ribosomal peptide synthase VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00501 AMP-binding enzyme 498 919 2.3E-90 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00501 AMP-binding enzyme 2405 2806 3.5E-90 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.30 214 455 1.3E-94 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00550 Phosphopantetheine attachment site 2914 2974 1.2E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00550 Phosphopantetheine attachment site 1421 1483 2.8E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 2127 2368 1.22E-38 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 1675 1911 1.89E-21 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2935 2950 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.10 42 408 1.3E-94 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2559 2570 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.10 1948 2315 1.8E-86 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF47336 2903 2978 5.23E-13 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:1.10.1200.10 2898 2986 1.6E-20 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.10 1489 1661 1.5E-44 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF52777 1948 2124 5.56E-30 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF13649 Methyltransferase domain 1034 1126 4.7E-8 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.300.30 1291 1409 1.1E-12 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF53335 1001 1153 1.67E-19 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF56801 480 1432 4.32E-144 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 519 943 4.9E-126 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2426 2830 3.2E-118 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00668 Condensation domain 1942 2384 7.3E-70 T 15-10-2018 IPR001242 Condensation domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00668 Condensation domain 1500 1908 1.4E-65 T 15-10-2018 IPR001242 Condensation domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Pfam PF00668 Condensation domain 39 458 5.1E-77 T 15-10-2018 IPR001242 Condensation domain VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:1.10.1200.10 1410 1488 1.5E-25 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1443 1458 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.40.50.12780 491 911 5.2E-129 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 SUPERFAMILY SSF56801 2367 2923 2.75E-139 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.40.50.150 991 1179 6.7E-22 T 15-10-2018 VIBNI_A3718 210d1345dc05f25bda41bdebee5df1e5 2996 Gene3D G3DSA:3.30.559.30 2125 2380 1.8E-86 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1100.10 19 157 3.6E-48 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1100.10 442 609 2.8E-65 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1100.10 647 713 6.3E-21 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:2.40.50.100 714 788 7.3E-32 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.4E-24 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:2.40.50.150 833 954 3.1E-44 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.295 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 2.3E-155 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1110.10 158 261 7.8E-27 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 15-10-2018 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:3.90.1110.10 301 441 1.2E-33 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:2.40.270.10 1035 1241 1.5E-86 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 345 454 1.1E-15 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 8.3E-7 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Gene3D G3DSA:2.40.270.10 790 832 1.1E-6 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3326 a42dff541a0cca09cd35c8cbb5ed2d8f 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.7E-57 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.7E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.7E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.7E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.419 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.4E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.4E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.4E-6 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 3.9E-83 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Gene3D G3DSA:3.40.50.620 202 397 1.9E-74 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Pfam PF02540 NAD synthase 212 284 2.0E-7 T 15-10-2018 IPR022310 NAD/GMP synthase VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Gene3D G3DSA:3.40.50.880 6 201 2.7E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.6E-41 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.4E-156 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 SUPERFAMILY SSF52402 189 412 6.84E-60 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 SUPERFAMILY SSF54810 397 517 2.35E-51 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 SUPERFAMILY SSF52317 8 229 6.48E-57 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Gene3D G3DSA:3.30.300.10 398 517 4.5E-51 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.8E-7 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.8E-7 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.8E-7 T 15-10-2018 VIBNI_A2767 00f8923e03d5c5a26f8d8f079ffa4a74 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 SMART SM00495 578 620 4.5E-9 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 SUPERFAMILY SSF49363 23 114 1.83E-7 T 15-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Gene3D G3DSA:2.60.120.380 452 553 1.1E-39 T 15-10-2018 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Pfam PF00149 Calcineurin-like phosphoesterase 144 319 4.2E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 472 538 5.6E-14 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 SUPERFAMILY SSF51055 565 621 1.92E-13 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Gene3D G3DSA:3.60.21.10 116 388 1.1E-18 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Pfam PF14600 Cellulose-binding domain 567 620 2.5E-23 T 15-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 SUPERFAMILY SSF56300 133 385 5.84E-20 T 15-10-2018 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 SUPERFAMILY SSF89260 455 543 1.83E-5 T 15-10-2018 VIBNI_B2130 a1f66128b5fbc6f53f2de5d6924790e1 623 Gene3D G3DSA:2.10.10.20 563 622 7.6E-21 T 15-10-2018 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 Pfam PF05683 Fumarase C-terminus 289 490 1.1E-83 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 2.2E-63 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 PIRSF PIRSF001394 1 506 1.2E-217 T 15-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.9E-98 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 SUPERFAMILY SSF117457 317 489 7.06E-64 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 Gene3D G3DSA:3.20.130.10 305 490 2.1E-62 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VIBNI_A1980 0dd3fa89be695b306f63d48704c10bf9 506 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 1.4E-51 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 Gene3D G3DSA:1.10.10.10 5 94 7.1E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.7E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1926 1f45d5a7d7e49697609983170e19f096 288 SUPERFAMILY SSF46785 5 110 1.57E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 6.1E-15 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 Pfam PF02378 Phosphotransferase system, EIIC 112 403 2.4E-31 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 461 1.6E-203 T 15-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 SUPERFAMILY SSF55604 9 81 6.8E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A2728 e7e021a8aea00b5ebf1b393c0ac9878a 474 Gene3D G3DSA:3.30.1360.60 2 78 1.6E-22 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 SUPERFAMILY SSF109998 38 239 1.06E-30 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 298 319 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Gene3D G3DSA:1.10.4030.30 241 374 1.1E-33 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Pfam PF13616 PPIC-type PPIASE domain 264 360 4.6E-24 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Pfam PF13624 SurA N-terminal domain 1 164 5.4E-46 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Gene3D G3DSA:1.10.4030.30 38 192 4.3E-11 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 SUPERFAMILY SSF54534 224 360 3.27E-29 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Gene3D G3DSA:3.10.50.40 268 362 1.1E-33 T 15-10-2018 VIBNI_A2423 20b1c68cef40e7c83a7d5922a635006a 623 Pfam PF13145 PPIC-type PPIASE domain 370 485 2.7E-7 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VIBNI_A0614 2053e7b30b9a4385149d5cb0adf6e380 233 SUPERFAMILY SSF55681 4 232 2.82E-42 T 15-10-2018 VIBNI_A0614 2053e7b30b9a4385149d5cb0adf6e380 233 Gene3D G3DSA:3.30.930.10 10 233 2.2E-42 T 15-10-2018 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Pfam PF04055 Radical SAM superfamily 151 325 1.8E-26 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 5.5E-150 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Pfam PF01938 TRAM domain 383 440 1.2E-15 T 15-10-2018 IPR002792 TRAM domain VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.2E-195 T 15-10-2018 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 SUPERFAMILY SSF102114 124 374 1.11E-59 T 15-10-2018 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Gene3D G3DSA:3.80.30.20 145 377 2.6E-81 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.222 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.3E-29 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 Gene3D G3DSA:3.40.50.12160 3 138 3.5E-34 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VIBNI_A2702 2d55e222e54ee710065e4dc07ebb1400 474 SMART SM00729 147 367 2.1E-61 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 Gene3D G3DSA:3.30.70.270 239 403 4.4E-46 T 15-10-2018 VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 Gene3D G3DSA:3.30.450.20 2 118 6.1E-6 T 15-10-2018 VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 Gene3D G3DSA:3.30.450.20 119 232 9.5E-13 T 15-10-2018 VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SUPERFAMILY SSF55073 251 400 1.18E-40 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SMART SM00267 235 398 1.9E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SUPERFAMILY SSF55785 109 233 2.09E-14 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 Pfam PF13188 PAS domain 121 177 8.4E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 Pfam PF00990 Diguanylate cyclase, GGDEF domain 246 393 5.3E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SUPERFAMILY SSF55785 9 109 3.32E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 117 242 1.2E-13 T 15-10-2018 IPR000014 PAS domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 112 2.5E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 243 398 6.6E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SMART SM00091 121 188 0.086 T 15-10-2018 IPR000014 PAS domain VIBNI_B1240 d4d9d2ff0e64dba52844a323475bee86 404 SMART SM00091 1 62 23.0 T 15-10-2018 IPR000014 PAS domain VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Gene3D G3DSA:3.10.20.310 23 97 5.4E-21 T 15-10-2018 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Pfam PF01103 Surface antigen 263 568 1.4E-26 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Gene3D G3DSA:3.10.20.310 98 185 2.2E-27 T 15-10-2018 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Pfam PF07244 Surface antigen variable number repeat 103 183 5.8E-7 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Pfam PF17243 POTRA domain TamA domain 1 25 96 1.6E-18 T 15-10-2018 IPR035243 TamA, POTRA domain 1 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Gene3D G3DSA:2.40.160.50 263 571 2.2E-97 T 15-10-2018 VIBNI_A3064 339f7166a98d9a14fcb2e8b95d361bcd 571 Gene3D G3DSA:3.10.20.310 186 262 3.4E-19 T 15-10-2018 VIBNI_A2659 dd897e5bcd8f092bbcdd893028e4919c 215 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 75 204 1.3E-8 T 15-10-2018 IPR009331 Oligogalacturonate-specific porin VIBNI_A2659 dd897e5bcd8f092bbcdd893028e4919c 215 Gene3D G3DSA:2.40.160.40 32 215 2.4E-13 T 15-10-2018 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 5 284 2.4E-39 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 Gene3D G3DSA:2.20.25.160 214 261 6.4E-91 T 15-10-2018 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 Gene3D G3DSA:3.40.630.10 7 284 6.4E-91 T 15-10-2018 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 PIRSF PIRSF018001 1 290 6.7E-61 T 15-10-2018 IPR016708 Aspartoacylase GO:0016811 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 SUPERFAMILY SSF53187 3 287 1.33E-68 T 15-10-2018 VIBNI_B1226 2e04bfe71425ccfd551a7af1caa47a15 290 Hamap MF_00704 Probable aspartoacylase. 2 289 29.526 T 15-10-2018 IPR016708 Aspartoacylase GO:0016811 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 TIGRFAM TIGR01312 XylB: xylulokinase 5 480 3.3E-159 T 15-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 PIRSF PIRSF000538 1 489 1.9E-130 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 Gene3D G3DSA:3.30.420.40 3 246 4.6E-82 T 15-10-2018 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 130 142 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 245 8.1E-67 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 Gene3D G3DSA:3.30.420.40 247 485 5.2E-65 T 15-10-2018 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 436 8.7E-28 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 SUPERFAMILY SSF53067 3 248 5.57E-71 T 15-10-2018 VIBNI_A1688 245fa4731a02421de7351373fd32c45d 497 SUPERFAMILY SSF53067 247 482 4.63E-53 T 15-10-2018 VIBNI_B0685 14e30ab0fedaec5ffba21f43f7047956 428 SUPERFAMILY SSF52540 56 378 5.62E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0685 14e30ab0fedaec5ffba21f43f7047956 428 SMART SM00382 196 350 8.9E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0685 14e30ab0fedaec5ffba21f43f7047956 428 Gene3D G3DSA:3.40.50.300 169 414 7.1E-70 T 15-10-2018 VIBNI_B0685 14e30ab0fedaec5ffba21f43f7047956 428 Gene3D G3DSA:3.30.450.380 1 167 4.6E-39 T 15-10-2018 VIBNI_B0685 14e30ab0fedaec5ffba21f43f7047956 428 Pfam PF00437 Type II/IV secretion system protein 72 348 4.0E-79 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 6.0E-62 T 15-10-2018 VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 Gene3D G3DSA:3.40.50.720 1 258 4.9E-85 T 15-10-2018 VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 SUPERFAMILY SSF51735 8 257 1.19E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0487 672adcb93aa5cb3a5d0adb42a727d55b 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 188 0.0024 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Gene3D G3DSA:3.50.50.60 377 498 7.0E-107 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Gene3D G3DSA:3.50.50.60 240 560 7.0E-107 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Gene3D G3DSA:3.30.390.30 576 695 3.2E-36 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 542 6.8E-31 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 6.8E-31 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 383 6.8E-31 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 422 6.8E-31 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 491 507 6.8E-31 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 577 683 2.8E-28 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 SUPERFAMILY SSF55424 573 687 9.97E-36 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Pfam PF09335 SNARE associated Golgi protein 68 184 1.1E-22 T 15-10-2018 IPR032816 SNARE associated Golgi protein VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 239 686 4.1E-125 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 SUPERFAMILY SSF51905 237 600 5.04E-60 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 555 5.2E-62 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 429 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 573 594 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 680 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 377 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 535 542 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 638 653 2.2E-59 T 15-10-2018 VIBNI_B0187 2528af08cd9c1c1b65b3d78ccf71c738 712 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 492 506 2.2E-59 T 15-10-2018 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 SUPERFAMILY SSF116726 294 377 3.92E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Gene3D G3DSA:3.30.70.1450 304 376 3.1E-5 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.7E-32 T 15-10-2018 IPR006512 YidE/YbjL duplication VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Pfam PF06826 Predicted Permease Membrane Region 389 556 1.1E-39 T 15-10-2018 IPR006512 YidE/YbjL duplication VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 1.1E-25 T 15-10-2018 IPR006512 YidE/YbjL duplication VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 2.5E-36 T 15-10-2018 IPR006512 YidE/YbjL duplication VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 55.817 T 15-10-2018 IPR023017 Transport protein YbjL, putative VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Gene3D G3DSA:3.30.70.1450 228 289 9.3E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 SUPERFAMILY SSF116726 231 285 1.14E-10 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Pfam PF02080 TrkA-C domain 232 284 2.4E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_A1109 aeb24282cc9ffbb6d3bcaef5724c9636 560 Pfam PF02080 TrkA-C domain 309 374 6.4E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_B0119 8a28d24979b57075e799e5d6d6f02fbe 209 Pfam PF01810 LysE type translocator 16 205 1.9E-36 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0119 8a28d24979b57075e799e5d6d6f02fbe 209 PIRSF PIRSF006324 1 209 8.5E-52 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Gene3D G3DSA:3.30.70.260 292 380 3.7E-24 T 15-10-2018 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Gene3D G3DSA:3.40.190.10 110 284 9.4E-55 T 15-10-2018 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Gene3D G3DSA:3.40.190.10 190 275 9.4E-55 T 15-10-2018 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 8.0E-29 T 15-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Pfam PF01817 Chorismate mutase type II 9 88 3.8E-17 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Gene3D G3DSA:1.20.59.10 1 109 3.7E-32 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 262 284 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 326 333 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 Pfam PF00800 Prephenate dehydratase 107 288 1.4E-59 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 PIRSF PIRSF001500 1 381 8.8E-140 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 SMART SM00830 9 90 1.3E-22 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 SUPERFAMILY SSF55021 281 378 1.76E-24 T 15-10-2018 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 SUPERFAMILY SSF48600 4 92 2.93E-19 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0383 7daa0a8d647faf12e2468aa797b0a52d 389 SUPERFAMILY SSF53850 106 292 9.55E-56 T 15-10-2018 VIBNI_A1238 79b4b24838eb9549adae380ad227895b 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 16 131 4.2E-12 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A1238 79b4b24838eb9549adae380ad227895b 349 Gene3D G3DSA:3.30.360.10 131 349 2.0E-24 T 15-10-2018 VIBNI_A1238 79b4b24838eb9549adae380ad227895b 349 SUPERFAMILY SSF51735 8 162 3.38E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1238 79b4b24838eb9549adae380ad227895b 349 Gene3D G3DSA:3.40.50.720 6 127 5.5E-19 T 15-10-2018 VIBNI_A1238 79b4b24838eb9549adae380ad227895b 349 SUPERFAMILY SSF55347 138 294 1.01E-13 T 15-10-2018 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 129 219 1.4E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 220 352 6.4E-24 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 486 649 9.9E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 23 128 6.8E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF81901 40 129 1.15E-21 T 15-10-2018 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 134 167 4.9E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 579 609 0.063 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 100 131 7.5E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 435 468 1.0E-6 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 613 643 3.8E-6 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 63 97 6.2E-9 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 45 61 5.7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 238 278 0.049 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 168 203 5.4E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 282 313 54.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 654 683 7.6E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 401 431 0.11 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 561 576 4.2 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 318 345 0.0054 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 363 391 0.036 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Pfam PF08238 Sel1 repeat 685 720 9.8E-4 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 353 482 4.2E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF50985 726 914 2.62E-14 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF81901 345 473 5.62E-26 T 15-10-2018 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:1.25.40.10 650 727 7.4E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 Gene3D G3DSA:2.130.10.30 804 1036 1.8E-21 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF81901 555 728 1.31E-36 T 15-10-2018 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF50985 885 1109 1.4E-21 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SUPERFAMILY SSF81901 129 345 2.22E-36 T 15-10-2018 VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 396 431 0.003 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 360 395 0.022 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 35 61 180.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 533 576 150.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 279 314 0.29 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 168 203 3.1E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 613 648 1.7E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 132 167 3.9E-8 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 649 684 3.2E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 685 720 7.0E-6 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 62 97 6.2E-11 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 204 237 92.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 315 350 0.17 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 238 278 0.075 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 98 131 0.77 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 577 612 2.7E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0127 e1348375d2f0a35a1b4f9aa7f39479d5 1129 SMART SM00671 434 469 1.5E-8 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00283 636 883 2.3E-97 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00091 295 358 1.3 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00091 422 483 8.7 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00091 168 231 17.0 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00091 41 108 0.015 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 695 851 8.7E-55 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Pfam PF13188 PAS domain 295 348 0.0017 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Pfam PF13188 PAS domain 168 220 0.085 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Pfam PF13188 PAS domain 43 96 3.0E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00304 583 635 2.1E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SMART SM00304 636 688 40.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Pfam PF13426 PAS domain 436 538 0.27 T 15-10-2018 IPR000014 PAS domain VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 SUPERFAMILY SSF58104 603 884 2.62E-75 T 15-10-2018 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Gene3D G3DSA:3.30.450.20 419 538 6.4E-36 T 15-10-2018 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Gene3D G3DSA:3.30.450.20 165 286 2.1E-33 T 15-10-2018 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Gene3D G3DSA:3.30.450.20 291 414 3.6E-34 T 15-10-2018 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Gene3D G3DSA:3.30.450.20 38 159 1.9E-33 T 15-10-2018 VIBNI_B0011 ad6375468dff3d5e401a2974f1a0843f 939 Gene3D G3DSA:1.10.287.950 582 884 2.4E-89 T 15-10-2018 VIBNI_A2902 790108d764cd1b071835fd7985a362e8 352 Gene3D G3DSA:3.40.50.300 151 258 8.3E-11 T 15-10-2018 VIBNI_A2902 790108d764cd1b071835fd7985a362e8 352 SUPERFAMILY SSF52540 154 289 3.84E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2682 ca4d7df139fe170eb7d0c4aaff7d3346 205 Gene3D G3DSA:2.50.20.10 28 204 2.1E-49 T 15-10-2018 VIBNI_A2682 ca4d7df139fe170eb7d0c4aaff7d3346 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 203 24.311 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VIBNI_A2682 ca4d7df139fe170eb7d0c4aaff7d3346 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 203 1.6E-38 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VIBNI_A2682 ca4d7df139fe170eb7d0c4aaff7d3346 205 Pfam PF03550 Outer membrane lipoprotein LolB 48 201 1.2E-38 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VIBNI_A2682 ca4d7df139fe170eb7d0c4aaff7d3346 205 SUPERFAMILY SSF89392 23 203 9.42E-44 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VIBNI_A2917 34b22deccae8567a30d7a00099c2b899 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.034 T 15-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VIBNI_A2917 34b22deccae8567a30d7a00099c2b899 329 Gene3D G3DSA:3.40.718.10 1 329 4.4E-122 T 15-10-2018 VIBNI_A2917 34b22deccae8567a30d7a00099c2b899 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 319 1.3E-106 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VIBNI_A2917 34b22deccae8567a30d7a00099c2b899 329 SUPERFAMILY SSF53659 4 326 3.68E-110 T 15-10-2018 VIBNI_A2917 34b22deccae8567a30d7a00099c2b899 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 5.6E-126 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 529 3.2E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.2E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 471 498 3.2E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 Gene3D G3DSA:1.10.287.950 304 635 4.3E-65 T 15-10-2018 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 Pfam PF00672 HAMP domain 306 354 4.0E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 SMART SM00304 304 358 9.2E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 SUPERFAMILY SSF58104 326 635 3.4E-68 T 15-10-2018 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 SMART SM01358 39 282 8.1E-4 T 15-10-2018 IPR032255 Helical bimodular sensor domain VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 SMART SM00283 373 634 5.8E-59 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1709 de284b52e6acf35a5192e8ff41a2e6e7 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 601 4.8E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1967 fe2d922ceb49c96cc04aa982d3c09ccf 176 Pfam PF00027 Cyclic nucleotide-binding domain 17 101 2.3E-14 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1967 fe2d922ceb49c96cc04aa982d3c09ccf 176 Gene3D G3DSA:2.60.120.10 2 141 2.4E-21 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1967 fe2d922ceb49c96cc04aa982d3c09ccf 176 SMART SM00100 3 114 5.2E-9 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1967 fe2d922ceb49c96cc04aa982d3c09ccf 176 SUPERFAMILY SSF51206 3 127 2.62E-22 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_B0767 504a34ef9dd29840597ee9b884df222f 377 SUPERFAMILY SSF56529 146 354 6.8E-24 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B0767 504a34ef9dd29840597ee9b884df222f 377 Gene3D G3DSA:3.90.850.10 135 355 4.1E-38 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 SUPERFAMILY SSF48452 147 254 2.47E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Gene3D G3DSA:1.25.40.10 144 262 2.8E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 261 5.1E-36 T 15-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Pfam PF13432 Tetratricopeptide repeat 156 206 9.1E-6 T 15-10-2018 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 262 16.395 T 15-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Pfam PF16331 TolA binding protein trimerisation 51 122 2.6E-21 T 15-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Gene3D G3DSA:1.20.5.110 48 126 8.6E-20 T 15-10-2018 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 SMART SM00028 182 215 46.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 SMART SM00028 218 251 0.003 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2254 6a048b0719cb9c02a3a59b43a8b22754 262 Pfam PF13174 Tetratricopeptide repeat 219 251 4.2E-7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 6.8E-34 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Pfam PF04545 Sigma-70, region 4 229 279 3.6E-15 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.788 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 9.3E-127 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 6.8E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 6.8E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 6.8E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 6.8E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Gene3D G3DSA:1.20.140.160 138 283 2.5E-14 T 15-10-2018 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 SUPERFAMILY SSF88659 198 281 2.99E-18 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 3.1E-9 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 SUPERFAMILY SSF88946 11 122 2.51E-40 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3736 c5b91b836f4142f212aa964f58f634c9 285 Gene3D G3DSA:1.20.120.1810 11 122 8.0E-27 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 PRINTS PR00313 NodO calcium binding signature 4050 4058 3.0E-5 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 PRINTS PR00313 NodO calcium binding signature 4038 4049 3.0E-5 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 PRINTS PR00313 NodO calcium binding signature 4059 4067 3.0E-5 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 PRINTS PR00313 NodO calcium binding signature 4068 4077 3.0E-5 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4089 4181 1.0E-9 T 15-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3926 4016 4.9E-6 T 15-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 Gene3D G3DSA:2.150.10.10 4020 4145 3.9E-18 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SUPERFAMILY SSF51120 4022 4115 7.33E-19 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3134 3242 1.6E-19 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1684 1790 1.1E-21 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1795 1895 4.8E-17 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2899 3015 7.4E-19 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1067 1160 2.2E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3576 3677 5.3E-22 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1273 1378 1.6E-20 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2681 2773 3.5E-17 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1582 1675 5.9E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1480 1573 1.2E-8 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 865 958 2.5E-17 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 557 655 4.2E-10 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 356 450 1.1E-7 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3247 3350 4.7E-19 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1167 1266 6.1E-14 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2328 2428 3.6E-20 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 661 754 2.5E-19 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 258 353 6.2E-8 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2117 2215 1.1E-16 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2549 2656 7.4E-17 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3682 3776 8.1E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2442 2544 1.4E-21 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2782 2868 5.6E-7 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2008 2110 6.4E-24 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3467 3571 1.6E-16 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2220 2320 2.3E-23 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3040 3125 3.7E-14 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1902 2003 2.1E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 762 858 6.5E-11 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3357 3450 3.4E-17 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 457 550 2.0E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3792 3875 1.0E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 965 1060 1.4E-12 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1381 1477 1.6E-6 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4055 4073 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 Gene3D G3DSA:2.60.40.60 1248 1365 4.0E-5 T 15-10-2018 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 261 341 0.3 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1483 1563 0.43 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 664 741 1.1 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1905 1990 0.17 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1276 1366 1.8 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1384 1465 2.1 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 2458 2530 0.25 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 2902 3001 0.42 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 3794 3880 1.1 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 359 439 1.2 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1070 1147 0.51 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 SMART SM00112 1686 1776 0.096 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4046 4064 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A1818 d40b8e1ea9bcc0c4d6c8b9fd59ecf6d9 4183 Gene3D G3DSA:2.60.40.60 1656 1770 2.7E-5 T 15-10-2018 VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 SMART SM00072 1 174 3.4E-8 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 SUPERFAMILY SSF52540 2 174 2.4E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 174 8.6E-58 T 15-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 Pfam PF00625 Guanylate kinase 6 164 3.4E-10 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 Gene3D G3DSA:3.40.50.300 7 173 2.0E-20 T 15-10-2018 VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 Gene3D G3DSA:3.30.63.10 34 89 2.0E-20 T 15-10-2018 VIBNI_A0018 45afa111698b6cc426adef1fa8670038 191 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 176 29.83 T 15-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 SUPERFAMILY SSF48295 3 95 1.57E-29 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 PIRSF PIRSF003196 1 100 4.7E-40 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.416 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 82 9.0E-30 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 85 2.7E-27 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 Pfam PF01371 Trp repressor protein 8 94 4.9E-32 T 15-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VIBNI_A0380 ccd094cf8c6cda3c05b00b5e29275562 100 Gene3D G3DSA:1.10.1270.10 1 98 2.0E-35 T 15-10-2018 IPR038116 TrpR-like superfamily VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 Pfam PF03222 Tryptophan/tyrosine permease family 4 391 1.8E-127 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.9E-81 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_A0260 c9d7ac051e9358acf44cb768f2062bf3 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 1.3E-130 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0645 189af4ba66c4afb8c05ed2698fd52b56 304 Gene3D G3DSA:3.40.50.1820 66 303 1.8E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0645 189af4ba66c4afb8c05ed2698fd52b56 304 SUPERFAMILY SSF53474 78 301 1.77E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0645 189af4ba66c4afb8c05ed2698fd52b56 304 Pfam PF01738 Dienelactone hydrolase family 93 301 6.8E-46 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VIBNI_B0973 cc461925b3c56a7f577bd15df7c4ced9 355 Gene3D G3DSA:3.40.50.2300 137 325 1.9E-76 T 15-10-2018 VIBNI_B0973 cc461925b3c56a7f577bd15df7c4ced9 355 Pfam PF13407 Periplasmic binding protein domain 33 294 3.4E-44 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0973 cc461925b3c56a7f577bd15df7c4ced9 355 Gene3D G3DSA:3.40.50.2300 35 317 1.9E-76 T 15-10-2018 VIBNI_B0973 cc461925b3c56a7f577bd15df7c4ced9 355 SUPERFAMILY SSF53822 40 306 3.62E-48 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0786 8553ad8732ac30ca3453b8133efc2c6c 161 Pfam PF00583 Acetyltransferase (GNAT) family 13 139 5.4E-19 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0786 8553ad8732ac30ca3453b8133efc2c6c 161 SUPERFAMILY SSF55729 1 159 9.29E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0786 8553ad8732ac30ca3453b8133efc2c6c 161 Gene3D G3DSA:3.40.630.30 2 161 4.5E-42 T 15-10-2018 VIBNI_A3547 77337fb41156158d881943325b437887 478 Gene3D G3DSA:3.40.50.300 191 470 1.1E-105 T 15-10-2018 VIBNI_A3547 77337fb41156158d881943325b437887 478 Gene3D G3DSA:1.10.860.10 26 190 1.4E-52 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VIBNI_A3547 77337fb41156158d881943325b437887 478 Pfam PF00772 DnaB-like helicase N terminal domain 34 135 1.2E-34 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VIBNI_A3547 77337fb41156158d881943325b437887 478 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 34 471 1.3E-174 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VIBNI_A3547 77337fb41156158d881943325b437887 478 SUPERFAMILY SSF48024 32 143 2.88E-37 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VIBNI_A3547 77337fb41156158d881943325b437887 478 Pfam PF03796 DnaB-like helicase C terminal domain 213 469 4.2E-112 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VIBNI_A3547 77337fb41156158d881943325b437887 478 SUPERFAMILY SSF52540 211 462 4.39E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Gene3D G3DSA:1.10.8.410 328 376 1.2E-20 T 15-10-2018 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 SUPERFAMILY SSF64518 1 376 4.84E-97 T 15-10-2018 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 PRINTS PR00207 Flagellin signature 111 134 5.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 PRINTS PR00207 Flagellin signature 76 95 5.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 PRINTS PR00207 Flagellin signature 37 54 5.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.8E-44 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Gene3D G3DSA:3.30.70.2120 174 275 8.2E-76 T 15-10-2018 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Gene3D G3DSA:1.20.1330.10 44 327 8.2E-76 T 15-10-2018 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.2E-24 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0713 12744fc39535db458ffa470f74ec9121 377 Pfam PF07196 Flagellin hook IN motif 195 247 8.6E-7 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:3.30.450.20 402 554 5.5E-43 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00448 1221 1338 3.8E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00086 630 670 0.026 T 15-10-2018 IPR001610 PAC motif VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00086 763 806 3.9E-4 T 15-10-2018 IPR001610 PAC motif VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00086 482 524 2.5E-8 T 15-10-2018 IPR001610 PAC motif VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 983 997 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1018 1036 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1001 1011 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1042 1055 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:3.30.450.20 555 673 8.6E-23 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:3.30.565.10 890 1060 8.4E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00387 938 1058 9.4E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF47384 814 893 1.94E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:1.20.1480.50 308 401 4.7E-7 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00091 554 620 1.5E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00091 689 757 27.0 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00091 407 476 1.9E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF47226 1321 1473 8.11E-17 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF08447 PAS fold 712 789 1.4E-11 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:3.30.450.20 688 755 2.3E-16 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00388 826 891 8.5E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF55785 421 523 1.5E-24 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF00072 Response regulator receiver domain 1223 1338 1.0E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF01627 Hpt domain 1403 1462 1.3E-5 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF13426 PAS domain 566 669 8.7E-10 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF13426 PAS domain 422 523 6.3E-19 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 939 1055 3.5E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 426 530 1.6E-16 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 551 677 2.6E-17 T 15-10-2018 IPR000014 PAS domain VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SMART SM00304 341 394 2.1E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:2.10.70.100 760 805 7.1E-9 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Pfam PF00512 His Kinase A (phospho-acceptor) domain 827 891 7.9E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:3.40.50.2300 1215 1343 8.5E-39 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF52172 1220 1350 2.7E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF158472 342 391 4.45E-5 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF55874 880 1056 9.69E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:1.10.287.130 806 889 2.8E-26 T 15-10-2018 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF55785 565 678 7.03E-19 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 Gene3D G3DSA:1.20.120.160 1373 1490 1.2E-11 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1470 1d3bb8ce34a93a0a1baab48016ef4313 1492 SUPERFAMILY SSF55785 698 808 4.36E-13 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Gene3D G3DSA:3.30.300.310 440 542 3.2E-29 T 15-10-2018 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Pfam PF00501 AMP-binding enzyme 35 444 3.1E-80 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 8 536 3.0E-248 T 15-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 SUPERFAMILY SSF56801 9 541 4.71E-134 T 15-10-2018 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 529 1.9E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Gene3D G3DSA:3.40.50.980 189 362 1.4E-53 T 15-10-2018 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Gene3D G3DSA:2.30.38.10 363 438 3.1E-25 T 15-10-2018 VIBNI_B0617 99ed8ba13ad4b0a05e840c4cc2ad9eb4 542 Gene3D G3DSA:3.40.50.980 26 185 2.9E-40 T 15-10-2018 VIBNI_A2065 c125231ffe8527555a53ce87b81d04b0 253 SMART SM00382 35 231 7.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2065 c125231ffe8527555a53ce87b81d04b0 253 Pfam PF00005 ABC transporter 26 183 5.8E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2065 c125231ffe8527555a53ce87b81d04b0 253 SUPERFAMILY SSF52540 9 241 2.66E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2065 c125231ffe8527555a53ce87b81d04b0 253 Gene3D G3DSA:3.40.50.300 2 251 1.1E-59 T 15-10-2018 VIBNI_A2065 c125231ffe8527555a53ce87b81d04b0 253 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.0E-97 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 Gene3D G3DSA:3.20.20.70 1 268 5.2E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.591 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 SUPERFAMILY SSF51366 1 266 1.22E-91 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1271 bc499671012f3836c8f40b69c718c924 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.8E-102 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A0988 b1be43294eb5e64766606dc5ba8f2012 107 Pfam PF01381 Helix-turn-helix 8 60 3.3E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A0988 b1be43294eb5e64766606dc5ba8f2012 107 Gene3D G3DSA:1.10.260.40 5 65 1.9E-10 T 15-10-2018 VIBNI_A0988 b1be43294eb5e64766606dc5ba8f2012 107 SUPERFAMILY SSF47413 6 62 2.44E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A0988 b1be43294eb5e64766606dc5ba8f2012 107 SMART SM00530 7 61 8.2E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.70.1440 667 868 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82693 148 335 5.75E-18 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82714 196 279 2.22E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.70.1430 52 816 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:1.20.1640.10 518 1020 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:1.20.1640.10 22 517 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82866 304 503 7.59E-34 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82866 804 1028 8.5E-49 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.70.1320 148 340 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82693 52 147 7.5E-23 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.2090.10 191 283 5.2E-255 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 344 367 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 22 46 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 50 68 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.3E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 SUPERFAMILY SSF82714 725 799 1.31E-7 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.2090.10 718 808 5.2E-255 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Gene3D G3DSA:3.30.70.1430 568 666 5.2E-255 T 15-10-2018 VIBNI_A1366 28aff271a1e489ab56b91b5edcb02057 1030 Pfam PF00873 AcrB/AcrD/AcrF family 16 1024 1.3E-170 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0446 6e5675571a92e337f83de35b4ba45953 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 424 2.4E-104 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A0446 6e5675571a92e337f83de35b4ba45953 430 PIRSF PIRSF006066 1 430 7.5E-124 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A0446 6e5675571a92e337f83de35b4ba45953 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 429 4.3E-118 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1881 331bb516179cc452f5a01507764c941c 259 PIRSF PIRSF006241 1 259 7.8E-93 T 15-10-2018 IPR026040 Hydroxypyruvate isomerase-like VIBNI_A1881 331bb516179cc452f5a01507764c941c 259 Pfam PF01261 Xylose isomerase-like TIM barrel 23 218 1.2E-32 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A1881 331bb516179cc452f5a01507764c941c 259 Gene3D G3DSA:3.20.20.150 1 259 4.3E-78 T 15-10-2018 VIBNI_A1881 331bb516179cc452f5a01507764c941c 259 SUPERFAMILY SSF51658 1 257 1.38E-81 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Gene3D G3DSA:3.30.70.270 365 542 3.4E-57 T 15-10-2018 VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Pfam PF00563 EAL domain 549 784 3.4E-74 T 15-10-2018 IPR001633 EAL domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SUPERFAMILY SSF158472 184 228 7.45E-5 T 15-10-2018 VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Pfam PF13426 PAS domain 260 358 1.1E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SUPERFAMILY SSF55785 237 358 1.41E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SMART SM00052 541 789 7.3E-111 T 15-10-2018 IPR001633 EAL domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 246 365 2.4E-16 T 15-10-2018 IPR000014 PAS domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SMART SM00267 360 531 1.1E-64 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Gene3D G3DSA:3.30.450.20 242 357 4.9E-20 T 15-10-2018 VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SMART SM00091 249 315 7.7E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 526 1.2E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 368 530 6.2E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Gene3D G3DSA:3.20.20.450 543 796 2.8E-94 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SUPERFAMILY SSF141868 547 800 1.44E-88 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 Gene3D G3DSA:1.20.1480.50 146 241 2.8E-6 T 15-10-2018 VIBNI_A0449 68351c71df940b2daa9c5f170250114c 814 SUPERFAMILY SSF55073 376 533 6.51E-49 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 15-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PIRSF PIRSF015592 1 210 2.8E-79 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 Gene3D G3DSA:3.40.630.20 1 212 2.0E-75 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 209 1.0E-72 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.3E-45 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.3E-45 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.3E-45 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 1.3E-45 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.3E-45 T 15-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 37.334 T 15-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 15-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 SUPERFAMILY SSF53182 1 208 6.8E-70 T 15-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VIBNI_B0694 14e4a123fcf6f1080441fdc29e36fa43 212 Pfam PF01470 Pyroglutamyl peptidase 3 199 2.1E-72 T 15-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 VIBNI_B2119 c68f69c560d68e1ad52e2b36ecfeb37a 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 391 1.8E-65 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 VIBNI_B2119 c68f69c560d68e1ad52e2b36ecfeb37a 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 134 407 1.7E-77 T 15-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 VIBNI_B2119 c68f69c560d68e1ad52e2b36ecfeb37a 418 SUPERFAMILY SSF101960 23 416 7.72E-100 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 Gene3D G3DSA:3.40.190.10 169 270 4.3E-59 T 15-10-2018 VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 Pfam PF03466 LysR substrate binding domain 92 299 6.5E-38 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 Gene3D G3DSA:1.10.10.10 7 93 7.2E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 SUPERFAMILY SSF53850 93 301 1.81E-42 T 15-10-2018 VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 Gene3D G3DSA:3.40.190.10 95 296 4.3E-59 T 15-10-2018 VIBNI_B1273 96442f12088bde19b23a36ec1f0311ed 304 SUPERFAMILY SSF46785 10 116 6.63E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 SMART SM00345 7 66 4.2E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 Gene3D G3DSA:3.90.1150.10 101 463 3.1E-104 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 Gene3D G3DSA:1.10.10.10 1 100 1.1E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 SUPERFAMILY SSF53383 95 465 1.31E-96 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.1E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 Gene3D G3DSA:3.40.640.10 141 360 3.1E-104 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 Pfam PF00155 Aminotransferase class I and II 140 460 6.9E-35 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A1255 9d31e6d4f0d43adffbf0f1ff53fdbfa5 471 SUPERFAMILY SSF46785 1 73 5.67E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Pfam PF01627 Hpt domain 837 918 1.9E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SMART SM00073 825 923 4.0E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SMART SM00448 668 781 3.1E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF158472 199 247 4.45E-6 T 15-10-2018 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Gene3D G3DSA:3.40.50.2300 668 813 2.1E-38 T 15-10-2018 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Pfam PF00072 Response regulator receiver domain 670 779 1.6E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Gene3D G3DSA:1.20.1480.50 162 270 2.8E-7 T 15-10-2018 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF47226 764 918 9.29E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF55874 344 516 1.83E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Gene3D G3DSA:1.20.120.160 814 930 3.9E-29 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF47384 275 356 6.28E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 175 1.3E-52 T 15-10-2018 IPR019247 Histidine kinase BarA, N-terminal VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SMART SM00387 402 518 1.9E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 3.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 3.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 3.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 3.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF52172 667 787 5.27E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SMART SM00304 198 250 3.0E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Gene3D G3DSA:3.30.565.10 357 521 4.9E-51 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SMART SM00388 290 355 1.6E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Gene3D G3DSA:1.10.287.130 277 356 3.6E-27 T 15-10-2018 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 9.5E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 5.7E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0122 5009bf40d65c5a29c26f9328c23da1b5 931 SUPERFAMILY SSF52172 529 653 2.7E-5 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 6.9E-162 T 15-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 Gene3D G3DSA:1.20.81.30 258 367 9.8E-26 T 15-10-2018 VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 6.5E-32 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 5.0E-26 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.5E-39 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.5E-39 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.5E-39 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.5E-39 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A3377 2d2db71552895f163aade5db1a9fc497 407 Gene3D G3DSA:1.20.81.30 55 173 1.2E-37 T 15-10-2018 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 Gene3D G3DSA:3.20.20.70 5 222 5.8E-86 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 PIRSF PIRSF001461 1 224 7.4E-105 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.3E-90 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.0E-98 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 SUPERFAMILY SSF51366 4 218 3.06E-77 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A3576 fa1cc97ee2a54c0816f872c05f24d73a 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 Pfam PF02311 AraC-like ligand binding domain 22 133 1.9E-16 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 SUPERFAMILY SSF46689 174 223 1.42E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 8.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 8.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 Gene3D G3DSA:1.10.10.60 233 276 8.1E-14 T 15-10-2018 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 Pfam PF12833 Helix-turn-helix domain 198 273 6.5E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 Gene3D G3DSA:1.10.10.60 169 232 2.2E-16 T 15-10-2018 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 SMART SM00342 189 271 1.2E-30 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 SUPERFAMILY SSF46689 226 273 1.15E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1825 689006dfa61a98dc2ab764a9e3e42c88 276 SUPERFAMILY SSF51215 26 138 5.75E-17 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 Pfam PF00072 Response regulator receiver domain 7 118 2.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 SUPERFAMILY SSF52172 4 130 2.13E-32 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 PIRSF PIRSF006171 3 227 2.6E-81 T 15-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 Gene3D G3DSA:3.40.50.2300 3 142 1.3E-29 T 15-10-2018 VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 Pfam PF12431 Transcriptional regulator 134 162 2.0E-7 T 15-10-2018 IPR028141 Transcriptional regulator VIBNI_A1847 3bed03cdc1c16840f6672e07faff94ae 228 SMART SM00448 5 118 3.6E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0060 10bc5d566b7e697f09e9c186b02a0923 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.418 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 VIBNI_A0060 10bc5d566b7e697f09e9c186b02a0923 187 SUPERFAMILY SSF143456 1 187 1.83E-66 T 15-10-2018 VIBNI_A0060 10bc5d566b7e697f09e9c186b02a0923 187 Gene3D G3DSA:3.40.1740.10 1 187 4.4E-69 T 15-10-2018 VIBNI_A0060 10bc5d566b7e697f09e9c186b02a0923 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 5.7E-50 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 SUPERFAMILY SSF53822 333 444 6.28E-10 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 Gene3D G3DSA:3.40.50.2300 108 249 2.7E-41 T 15-10-2018 VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 Gene3D G3DSA:3.40.50.2300 336 448 2.6E-9 T 15-10-2018 VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 Pfam PF13407 Periplasmic binding protein domain 10 264 9.6E-24 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 Gene3D G3DSA:3.40.50.2300 32 266 2.7E-41 T 15-10-2018 VIBNI_B0320 edf5faf03ff62ad4fb5e118ba7e32131 457 SUPERFAMILY SSF53822 6 294 8.52E-43 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2413 ef9def75e6026143a9a8317e441093be 265 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 18 258 3.9E-80 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VIBNI_A2413 ef9def75e6026143a9a8317e441093be 265 Pfam PF12697 Alpha/beta hydrolase family 21 252 1.8E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2413 ef9def75e6026143a9a8317e441093be 265 SUPERFAMILY SSF53474 13 258 3.75E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2413 ef9def75e6026143a9a8317e441093be 265 Gene3D G3DSA:3.40.50.1820 8 259 1.4E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2413 ef9def75e6026143a9a8317e441093be 265 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 259 33.094 T 15-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VIBNI_A1083 db63b3d062af6cde8d42c5d0b41a8199 342 SUPERFAMILY SSF53448 24 228 4.56E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1083 db63b3d062af6cde8d42c5d0b41a8199 342 Pfam PF00535 Glycosyl transferase family 2 29 187 2.3E-29 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A1083 db63b3d062af6cde8d42c5d0b41a8199 342 Gene3D G3DSA:3.90.550.10 10 223 5.4E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 Gene3D G3DSA:2.40.33.10 71 167 7.7E-148 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 SUPERFAMILY SSF50800 70 167 3.66E-28 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 Gene3D G3DSA:3.40.1380.20 336 467 9.0E-42 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.3E-28 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 SUPERFAMILY SSF51621 1 339 3.84E-103 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 Gene3D G3DSA:3.20.20.60 4 332 7.7E-148 T 15-10-2018 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 9.1E-80 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 2.6E-154 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 SUPERFAMILY SSF52935 323 469 6.41E-34 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A2884 e5ca0d164e2ddebaafcef8f54a67878e 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.8E-188 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SUPERFAMILY SSF55073 417 575 5.49E-46 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 Gene3D G3DSA:3.30.450.20 159 268 1.8E-7 T 15-10-2018 VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SUPERFAMILY SSF55785 268 392 1.43E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 Gene3D G3DSA:3.30.450.20 269 407 1.4E-23 T 15-10-2018 VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 3.8E-13 T 15-10-2018 IPR000014 PAS domain VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 2.3E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SMART SM00091 38 104 24.0 T 15-10-2018 IPR000014 PAS domain VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SMART SM00091 279 346 0.0074 T 15-10-2018 IPR000014 PAS domain VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SUPERFAMILY SSF55785 149 251 3.32E-6 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 SMART SM00267 401 577 3.8E-66 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 Pfam PF08448 PAS fold 285 394 1.5E-16 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 Gene3D G3DSA:3.30.70.270 408 577 5.7E-52 T 15-10-2018 VIBNI_A0281 c99bef8d91c066589de7a30a3a06bd6e 577 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 3.5E-51 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF55781 296 465 2.94E-5 T 15-10-2018 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF52172 834 955 6.83E-26 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF00072 Response regulator receiver domain 982 1093 2.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF00072 Response regulator receiver domain 839 951 1.5E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:1.10.287.130 571 655 7.5E-27 T 15-10-2018 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF47226 1076 1226 4.71E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 798 4.4E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 817 4.4E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 759 4.4E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF52172 978 1101 4.27E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:3.30.565.10 656 823 1.3E-51 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF00512 His Kinase A (phospho-acceptor) domain 593 657 2.7E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF55785 443 570 1.68E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF01627 Hpt domain 1161 1230 1.1E-5 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:3.30.450.20 453 570 8.0E-16 T 15-10-2018 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF47384 575 658 6.67E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:3.40.50.2300 824 967 5.6E-27 T 15-10-2018 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SUPERFAMILY SSF55874 646 817 3.8E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 461 579 1.3E-10 T 15-10-2018 IPR000014 PAS domain VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SMART SM00387 704 820 6.5E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:3.40.50.12740 978 1141 6.5E-43 T 15-10-2018 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SMART SM00448 980 1093 1.0E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SMART SM00448 836 951 2.0E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Gene3D G3DSA:1.20.120.160 1142 1255 5.4E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF00989 PAS fold 460 569 2.2E-10 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 704 819 4.5E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SMART SM00388 592 657 1.8E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0496 e879c8506a36e161ecfcf43e47da93b1 1322 SMART SM00091 458 524 1.7E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A3387 3660f51b9c6a40709c7affbdb149bdf6 285 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 276 23.73 T 15-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VIBNI_A3387 3660f51b9c6a40709c7affbdb149bdf6 285 Pfam PF03631 Virulence factor BrkB 23 271 2.7E-58 T 15-10-2018 IPR017039 Virulence factor BrkB VIBNI_A3387 3660f51b9c6a40709c7affbdb149bdf6 285 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 270 1.2E-83 T 15-10-2018 IPR017039 Virulence factor BrkB VIBNI_A3387 3660f51b9c6a40709c7affbdb149bdf6 285 PIRSF PIRSF035875 4 285 5.6E-55 T 15-10-2018 IPR017039 Virulence factor BrkB VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 Pfam PF01106 NifU-like domain 114 180 1.7E-19 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 101 2.6E-12 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 Gene3D G3DSA:2.60.300.12 3 101 1.5E-14 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 SUPERFAMILY SSF89360 4 100 2.94E-22 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 Gene3D G3DSA:3.30.300.130 104 192 6.4E-19 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 SUPERFAMILY SSF117916 98 187 2.4E-22 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 5.0E-26 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.627 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VIBNI_A3364 9536fb1799e3a5e4b8d5cf67abdcf911 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 5.4E-97 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VIBNI_A1581 81c257909e1b0c2322b5fe0f77baf780 254 Gene3D G3DSA:3.40.190.10 108 211 8.5E-12 T 15-10-2018 VIBNI_A1581 81c257909e1b0c2322b5fe0f77baf780 254 SUPERFAMILY SSF53850 26 251 3.69E-25 T 15-10-2018 VIBNI_A1581 81c257909e1b0c2322b5fe0f77baf780 254 Gene3D G3DSA:3.40.190.10 46 244 8.5E-12 T 15-10-2018 VIBNI_A1581 81c257909e1b0c2322b5fe0f77baf780 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 252 6.9E-12 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 1.1E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 SUPERFAMILY SSF46894 142 207 1.77E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 Gene3D G3DSA:3.40.50.12740 3 207 2.5E-59 T 15-10-2018 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 Pfam PF00072 Response regulator receiver domain 4 115 4.8E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 SMART SM00448 2 115 6.4E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 SUPERFAMILY SSF52172 1 132 4.27E-31 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 SMART SM00421 144 201 5.7E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2464 6334102ab17249a520dfa2d037889877 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 SUPERFAMILY SSF52172 1 122 2.42E-39 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3257 58e76236a251178ebd94632082a39483 230 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-38 T 15-10-2018 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 SUPERFAMILY SSF46894 126 227 3.97E-23 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 Gene3D G3DSA:1.10.10.10 129 230 1.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3257 58e76236a251178ebd94632082a39483 230 SMART SM00448 2 111 7.6E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 SMART SM00862 150 226 6.7E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3257 58e76236a251178ebd94632082a39483 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 1.5E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 Pfam PF02378 Phosphotransferase system, EIIC 13 340 2.0E-74 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 Pfam PF00367 phosphotransferase system, EIIB 426 457 5.4E-12 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 496 5.1E-202 T 15-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 481 2.9E-22 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 Gene3D G3DSA:3.30.1360.60 418 498 3.6E-28 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A2352 19e063eb968a8f7959dba86f4407c86f 499 SUPERFAMILY SSF55604 422 494 6.28E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 SUPERFAMILY SSF55826 218 390 3.27E-30 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Pfam PF03129 Anticodon binding domain 475 567 6.7E-22 T 15-10-2018 IPR004154 Anticodon-binding VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 SUPERFAMILY SSF55681 10 478 9.0E-99 T 15-10-2018 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.9E-26 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.4E-42 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 1.8E-245 T 15-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 PIRSF PIRSF001535 1 571 5.6E-266 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.902 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Gene3D G3DSA:3.30.930.10 11 465 2.4E-235 T 15-10-2018 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Gene3D G3DSA:3.90.960.10 240 389 2.4E-235 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 SUPERFAMILY SSF52954 463 569 1.51E-32 T 15-10-2018 VIBNI_A0600 f9a85cf99d4528897d81a4045785b136 571 Gene3D G3DSA:3.40.50.800 4 554 2.4E-235 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 317 889 1.4E-182 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF81653 387 485 2.75E-23 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 ProSitePatterns PS01047 Heavy-metal-associated domain. 165 194 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF56784 585 886 6.68E-57 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:3.40.50.1000 568 832 3.3E-86 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 ProSitePatterns PS01229 Hypothetical cof family signature 2. 780 802 - T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00942 Copper-transporting ATPase 1 signature 69 94 1.0E-7 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00942 Copper-transporting ATPase 1 signature 300 325 1.0E-7 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00942 Copper-transporting ATPase 1 signature 164 185 1.0E-7 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 589 595 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 352 888 1.2E-116 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 299 890 1.3E-185 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF55008 69 135 3.01E-8 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 737 9.8E-22 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 601 9.8E-22 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 780 799 9.8E-22 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 9.8E-22 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 803 815 9.8E-22 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF55008 154 230 4.06E-15 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 356 858 1.5E-83 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Pfam PF00702 haloacid dehalogenase-like hydrolase 584 794 4.3E-45 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:3.30.70.100 9 67 7.9E-7 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:3.40.1110.10 598 712 3.3E-86 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 374 392 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 853 867 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 302 321 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 508 522 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 757 774 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 175 189 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 PRINTS PR00943 Copper-transporting ATPase signature 570 585 1.1E-14 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:2.70.150.20 378 490 3.4E-37 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF81665 334 837 4.18E-10 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 SUPERFAMILY SSF55008 5 66 7.85E-8 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Pfam PF00122 E1-E2 ATPase 385 566 2.8E-46 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Pfam PF00403 Heavy-metal-associated domain 12 61 9.0E-5 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Pfam PF00403 Heavy-metal-associated domain 166 223 3.6E-11 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:3.30.70.100 154 229 2.8E-16 T 15-10-2018 VIBNI_A2657 8f321ede1e13b0f4682a2bde62ae5510 895 Gene3D G3DSA:3.30.70.100 70 130 3.1E-6 T 15-10-2018 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 SUPERFAMILY SSF51735 27 209 3.26E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Gene3D G3DSA:1.10.1040.10 209 494 2.2E-119 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 2.7E-60 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 37.218 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.7E-23 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.3E-16 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 SUPERFAMILY SSF48179 348 487 1.26E-42 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 SUPERFAMILY SSF48179 210 341 1.65E-37 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 Gene3D G3DSA:3.40.50.720 1 208 1.4E-86 T 15-10-2018 VIBNI_A3499 720f9aa9cc7b4710536f79932ed25c9f 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.7E-124 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 SUPERFAMILY SSF50249 70 128 2.74E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 SUPERFAMILY SSF50249 130 187 9.25E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 SUPERFAMILY SSF50104 2 64 7.02E-21 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.2E-22 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.5E-77 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Gene3D G3DSA:2.30.30.30 1 64 4.5E-27 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 7.5E-25 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.002 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Gene3D G3DSA:2.40.50.140 66 127 2.2E-28 T 15-10-2018 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Gene3D G3DSA:2.40.50.140 130 188 5.8E-27 T 15-10-2018 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 SMART SM01185 69 123 9.3E-26 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 SMART SM00841 131 186 6.2E-31 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.1E-25 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like VIBNI_A3244 ff97c109e8e423d806b272bbe0b89f25 188 PIRSF PIRSF005901 2 188 1.3E-63 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP VIBNI_B0747 6db96bf73e9f8f515128446a703d7e52 327 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 295 2.3E-84 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B0747 6db96bf73e9f8f515128446a703d7e52 327 SMART SM00797 24 312 1.6E-121 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B0747 6db96bf73e9f8f515128446a703d7e52 327 SUPERFAMILY SSF50891 176 302 6.45E-8 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B0747 6db96bf73e9f8f515128446a703d7e52 327 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 318 8.6E-83 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B0747 6db96bf73e9f8f515128446a703d7e52 327 Gene3D G3DSA:2.40.100.10 173 324 4.0E-42 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 SUPERFAMILY SSF50475 6 212 1.04E-60 T 15-10-2018 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 15-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 PIRSF PIRSF000190 1 212 1.8E-81 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 37.124 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 2.4E-19 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 116 1.1E-21 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 212 6.5E-87 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B0028 74e00888706093f27aa707ac2a818438 212 Gene3D G3DSA:2.30.110.10 13 212 3.3E-74 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 Pfam PF00202 Aminotransferase class-III 26 418 8.2E-128 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 Gene3D G3DSA:3.90.1150.10 7 412 9.9E-170 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 SUPERFAMILY SSF53383 4 420 2.74E-133 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.525 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 Gene3D G3DSA:3.40.640.10 58 327 9.9E-170 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 PIRSF PIRSF000521 27 421 2.5E-37 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2319 9c5251dc868450b3b70a3feee5721925 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.9E-179 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 SUPERFAMILY SSF52540 221 305 3.98E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 158 369 2.8E-69 T 15-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 SMART SM00962 281 474 5.3E-66 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 Gene3D G3DSA:3.40.50.300 279 461 5.2E-50 T 15-10-2018 VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 Pfam PF00448 SRP54-type protein, GTPase domain 283 470 4.1E-39 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 SUPERFAMILY SSF52540 278 468 9.88E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0739 c8cce541a17ad7d886ab2b33c88ed81f 494 SMART SM00382 280 466 1.3E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 SMART SM00347 28 128 2.6E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.4E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.4E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.4E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.4E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 SUPERFAMILY SSF46785 3 139 1.15E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 Gene3D G3DSA:1.10.10.10 2 140 3.7E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0542 9b2fd9cd6afa139977ad26a7875ebed8 145 Pfam PF01047 MarR family 42 92 1.6E-17 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 SUPERFAMILY SSF53067 112 216 2.43E-5 T 15-10-2018 VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 SUPERFAMILY SSF53067 232 393 2.22E-18 T 15-10-2018 VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 SUPERFAMILY SSF46785 38 98 1.32E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 Gene3D G3DSA:3.30.420.40 110 393 6.4E-30 T 15-10-2018 VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 Gene3D G3DSA:1.10.10.10 23 101 1.3E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 Gene3D G3DSA:3.30.420.40 230 379 6.4E-30 T 15-10-2018 VIBNI_A1199 36e9ee0cb2cfbff1131497b2bfcfdf84 407 Pfam PF00480 ROK family 131 388 1.6E-13 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A0717 bbcef3ddf8d1cbe3665b727c02d95804 136 Gene3D G3DSA:1.20.120.340 2 126 5.6E-39 T 15-10-2018 VIBNI_A0717 bbcef3ddf8d1cbe3665b727c02d95804 136 PIRSF PIRSF039090 1 132 7.8E-43 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VIBNI_A0717 bbcef3ddf8d1cbe3665b727c02d95804 136 Pfam PF02561 Flagellar protein FliS 6 122 9.0E-37 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VIBNI_A0717 bbcef3ddf8d1cbe3665b727c02d95804 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.4E-22 T 15-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VIBNI_A0717 bbcef3ddf8d1cbe3665b727c02d95804 136 SUPERFAMILY SSF101116 6 127 7.72E-39 T 15-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 PIRSF PIRSF001220 1 335 1.4E-95 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 Gene3D G3DSA:3.40.50.1170 2 209 5.4E-93 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 Pfam PF00710 Asparaginase, N-terminal 5 191 9.4E-67 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 336 1.7E-116 T 15-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 SMART SM00870 5 324 5.7E-139 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 PIRSF PIRSF500176 2 333 4.5E-110 T 15-10-2018 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 Gene3D G3DSA:3.40.50.40 210 337 6.7E-45 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VIBNI_A0845 6016f0e4f86063b5db33fb2072113aa3 337 SUPERFAMILY SSF53774 3 336 3.53E-113 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VIBNI_B0539 53ed65e3bb482c329c987c5fee626989 115 Pfam PF01042 Endoribonuclease L-PSP 32 114 8.1E-12 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_B0539 53ed65e3bb482c329c987c5fee626989 115 SUPERFAMILY SSF55298 18 114 7.07E-18 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0539 53ed65e3bb482c329c987c5fee626989 115 Gene3D G3DSA:3.30.1330.40 8 115 3.0E-20 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 SUPERFAMILY SSF53927 22 290 1.2E-65 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 Gene3D G3DSA:3.10.20.10 55 138 8.1E-8 T 15-10-2018 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 Pfam PF02634 FdhD/NarQ family 44 290 1.7E-67 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 Gene3D G3DSA:3.40.140.10 150 294 1.1E-48 T 15-10-2018 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 291 30.257 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 59 291 1.7E-48 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A3725 f4df1b4dfc4ebbef945f6ce77f1849c4 294 PIRSF PIRSF015626 4 293 1.4E-70 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 83 108 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 16 36 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.3E-41 T 15-10-2018 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 Gene3D G3DSA:1.10.3860.10 10 421 1.8E-148 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 SUPERFAMILY SSF118215 18 405 4.05E-129 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 299 322 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site VIBNI_B0697 a5ef17a8cd2eb6d564dbd281fa62b27b 428 Pfam PF00375 Sodium:dicarboxylate symporter family 18 403 1.5E-138 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_B0238 b7e2cb8219131b3d741adf80063c5fa2 231 SUPERFAMILY SSF89562 11 188 1.2E-20 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_B0238 b7e2cb8219131b3d741adf80063c5fa2 231 Pfam PF03737 Aldolase/RraA 14 182 7.1E-17 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_B0238 b7e2cb8219131b3d741adf80063c5fa2 231 Gene3D G3DSA:3.50.30.40 1 184 1.7E-26 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.70.1430 40 794 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.2090.10 178 268 4.9E-283 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.70.1440 648 843 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-74 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82714 701 784 1.03E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82714 182 263 5.23E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82866 782 1005 6.93E-46 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:1.20.1640.10 10 500 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82693 553 650 1.44E-20 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.70.1430 555 647 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.70.1320 134 325 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:3.30.2090.10 698 786 4.9E-283 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82693 41 130 2.96E-23 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82693 136 323 4.36E-20 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Gene3D G3DSA:1.20.1640.10 501 1001 4.9E-283 T 15-10-2018 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 4.4E-269 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A3497 9e5cfa589df614e6d17ad7d17fb151e2 1041 SUPERFAMILY SSF82866 291 489 2.88E-46 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.70.1440 666 861 1.1E-248 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.2090.10 713 800 1.1E-248 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82866 286 480 3.27E-35 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.70.1430 38 808 1.1E-248 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.2090.10 172 263 1.1E-248 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.70.1320 131 320 1.1E-248 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.8E-23 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.8E-23 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.8E-23 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.8E-23 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.8E-23 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:3.30.70.1430 555 665 1.1E-248 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82714 177 259 2.49E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 1.2E-158 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82693 38 131 2.82E-17 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:1.20.1640.10 8 497 1.1E-248 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82866 799 1022 8.37E-47 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82714 724 797 3.92E-9 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 SUPERFAMILY SSF82693 136 318 1.12E-6 T 15-10-2018 VIBNI_A2905 f22cf3fb380a3e3e4cfc4cb0825ef427 1036 Gene3D G3DSA:1.20.1640.10 498 1018 1.1E-248 T 15-10-2018 VIBNI_A3314 e1dc6302e312e6c75c7fbf83b3ae5ebe 232 PIRSF PIRSF028160 1 231 1.4E-90 T 15-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VIBNI_A3314 e1dc6302e312e6c75c7fbf83b3ae5ebe 232 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 4.3E-51 T 15-10-2018 IPR010858 Protein of unknown function DUF1481 VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 2.3E-27 T 15-10-2018 IPR003746 Protein of unknown function DUF167 VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 21.205 T 15-10-2018 IPR003746 Protein of unknown function DUF167 VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 92 2.0E-29 T 15-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 Gene3D G3DSA:3.30.1200.10 1 96 1.1E-36 T 15-10-2018 IPR036591 YggU-like superfamily VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 SUPERFAMILY SSF69786 4 96 9.94E-33 T 15-10-2018 IPR036591 YggU-like superfamily VIBNI_A0052 4f8dfe67798f9d55c5a8dd2180a5a890 96 SMART SM01152 8 84 2.3E-39 T 15-10-2018 IPR003746 Protein of unknown function DUF167 VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Gene3D G3DSA:3.20.20.450 422 674 7.9E-94 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Pfam PF00563 EAL domain 426 660 1.9E-70 T 15-10-2018 IPR001633 EAL domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SMART SM00267 240 409 4.5E-54 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 250 406 5.1E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SMART SM00091 131 198 1.7 T 15-10-2018 IPR000014 PAS domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SMART SM00091 8 74 6.0E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Gene3D G3DSA:3.30.70.270 249 421 9.1E-50 T 15-10-2018 VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Gene3D G3DSA:3.30.450.20 129 237 4.4E-8 T 15-10-2018 VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SUPERFAMILY SSF141868 426 673 8.37E-85 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SUPERFAMILY SSF55073 257 411 4.16E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SUPERFAMILY SSF55785 118 185 2.79E-7 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Gene3D G3DSA:3.30.450.20 3 128 3.1E-14 T 15-10-2018 VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Pfam PF08448 PAS fold 15 119 1.8E-9 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SMART SM00052 419 665 2.0E-108 T 15-10-2018 IPR001633 EAL domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 SUPERFAMILY SSF55785 5 113 1.1E-10 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 6.4E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 405 3.4E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0431 d3db8e4cda7495678abae2cf50f7711f 678 Pfam PF13426 PAS domain 141 197 2.2E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_A0079 82fe6e1af5b8e9bd470c7b2591a75b92 316 Gene3D G3DSA:3.40.50.1980 18 137 7.2E-20 T 15-10-2018 VIBNI_A0079 82fe6e1af5b8e9bd470c7b2591a75b92 316 Pfam PF01497 Periplasmic binding protein 47 283 2.0E-22 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A0079 82fe6e1af5b8e9bd470c7b2591a75b92 316 SUPERFAMILY SSF53807 36 309 1.1E-43 T 15-10-2018 VIBNI_A0079 82fe6e1af5b8e9bd470c7b2591a75b92 316 Gene3D G3DSA:3.40.50.1980 141 315 1.1E-50 T 15-10-2018 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PIRSF PIRSF000349 1 203 6.0E-81 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 SUPERFAMILY SSF46609 1 86 8.77E-31 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 5.0E-28 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 Gene3D G3DSA:2.40.500.20 86 203 3.2E-47 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 3.9E-40 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 SUPERFAMILY SSF54719 87 201 5.76E-44 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 Gene3D G3DSA:1.10.287.990 20 85 1.6E-24 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.8E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.8E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.8E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.8E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3259 42e3c7ac62613390b8e06e6bbea95179 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.8E-22 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 Pfam PF01464 Transglycosylase SLT domain 485 594 7.8E-29 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 Gene3D G3DSA:1.10.1240.20 400 471 7.9E-22 T 15-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 SUPERFAMILY SSF53955 479 633 4.3E-47 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 471 2.7E-20 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 Gene3D G3DSA:1.25.20.10 27 388 1.3E-95 T 15-10-2018 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 Gene3D G3DSA:1.10.530.10 473 643 5.3E-50 T 15-10-2018 VIBNI_A0379 a2fa1db8c30433a2e5c3e47a184b940d 643 SUPERFAMILY SSF48435 29 476 1.31E-117 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 Gene3D G3DSA:2.40.37.10 18 404 5.8E-151 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 SUPERFAMILY SSF51419 27 284 1.89E-83 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 Gene3D G3DSA:3.20.20.10 35 277 5.8E-151 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 4.5E-26 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 SUPERFAMILY SSF50621 259 414 7.95E-52 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.211 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.5E-26 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.5E-26 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.5E-26 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.5E-26 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.5E-26 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 5.0E-29 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 5.0E-29 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 5.0E-29 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 5.0E-29 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 5.1E-168 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A3768 b348092776c5593f1c00d75c871bc9fb 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.7E-76 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 Gene3D G3DSA:3.10.410.10 469 558 7.7E-30 T 15-10-2018 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 SUPERFAMILY SSF52540 4 580 1.35E-214 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 Gene3D G3DSA:3.40.50.300 4 454 1.2E-190 T 15-10-2018 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 2.4E-240 T 15-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 15-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 Gene3D G3DSA:3.30.1510.10 129 264 1.2E-190 T 15-10-2018 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 15-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VIBNI_B1032 25861e9a99a21a85f81953d698bf0dc3 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.692 T 15-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 Gene3D G3DSA:3.40.190.10 181 265 9.5E-10 T 15-10-2018 VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 SUPERFAMILY SSF53850 86 292 2.37E-32 T 15-10-2018 VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.7E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 Gene3D G3DSA:1.10.10.10 1 85 3.2E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 SUPERFAMILY SSF46785 1 111 1.21E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 Pfam PF03466 LysR substrate binding domain 88 290 3.3E-36 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3500 de6625596d299c8564ef3d7d4ecb7403 294 Gene3D G3DSA:3.40.190.10 86 180 3.1E-17 T 15-10-2018 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 9.5E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 Gene3D G3DSA:3.55.40.10 33 194 3.2E-48 T 15-10-2018 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.2E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 Pfam PF12019 Type II transport protein GspH 41 180 3.1E-7 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.5E-21 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.5E-21 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 3.5E-21 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 160 1.6E-17 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VIBNI_A3375 747b92b891c3ae0343fe8955939d4def 194 SUPERFAMILY SSF54523 7 77 1.26E-9 T 15-10-2018 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.575 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.7E-87 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 SUPERFAMILY SSF51351 2 251 4.71E-89 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 9.5E-80 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3617 a13e8c60a52af72cf48cdf28f6ac931b 256 Gene3D G3DSA:3.20.20.70 1 256 6.9E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0904 c3d53c80d6cb397e8f3465ffc1126ff7 230 PIRSF PIRSF006102 1 219 8.2E-79 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0904 c3d53c80d6cb397e8f3465ffc1126ff7 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 8.9E-87 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VIBNI_A0904 c3d53c80d6cb397e8f3465ffc1126ff7 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.823 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VIBNI_A0904 c3d53c80d6cb397e8f3465ffc1126ff7 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 1.6E-65 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0373 df189847c465535314a53678a298c152 562 SUPERFAMILY SSF55781 229 351 8.69E-9 T 15-10-2018 VIBNI_A0373 df189847c465535314a53678a298c152 562 Pfam PF07694 5TMR of 5TMR-LYT 27 196 5.8E-62 T 15-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VIBNI_A0373 df189847c465535314a53678a298c152 562 Gene3D G3DSA:3.30.565.10 401 560 1.4E-12 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0373 df189847c465535314a53678a298c152 562 SUPERFAMILY SSF55874 422 555 1.04E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0373 df189847c465535314a53678a298c152 562 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 230 352 1.6E-8 T 15-10-2018 IPR039472 Sporulation stage V protein T, GAF domain VIBNI_A0373 df189847c465535314a53678a298c152 562 Pfam PF06580 Histidine kinase 368 446 1.6E-26 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VIBNI_A0373 df189847c465535314a53678a298c152 562 Gene3D G3DSA:3.30.450.40 228 354 7.0E-9 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 Gene3D G3DSA:3.40.50.300 6 329 6.3E-97 T 15-10-2018 VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 2.9E-26 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 9.0E-20 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 SMART SM00382 46 239 8.8E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 Pfam PF00005 ABC transporter 38 189 4.8E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0928 83c09bea398aea50676b987d5f700513 329 SUPERFAMILY SSF52540 9 261 2.03E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 Gene3D G3DSA:3.40.50.2300 1 122 3.2E-33 T 15-10-2018 VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 SMART SM00448 4 114 1.6E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 SUPERFAMILY SSF52172 2 127 2.56E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.5E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 Gene3D G3DSA:1.10.10.10 123 236 1.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 SMART SM00862 156 232 4.1E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 SUPERFAMILY SSF46894 137 233 1.5E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A0284 e3fba0e64532980c14e1a6806b974cb2 238 Pfam PF00072 Response regulator receiver domain 6 113 1.0E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 Pfam PF00005 ABC transporter 36 191 1.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 Gene3D G3DSA:3.40.50.300 13 282 2.9E-85 T 15-10-2018 VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 SUPERFAMILY SSF52540 15 263 1.33E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 SMART SM00382 44 249 3.3E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2175 ab0c70cac3ebf0dcfd81c76ab7925e02 283 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 3.7E-6 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 SUPERFAMILY SSF52540 22 1434 3.85E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Pfam PF04310 MukB N-terminal 2 227 3.4E-120 T 15-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Pfam PF16330 MukB hinge domain 646 811 1.9E-72 T 15-10-2018 IPR032520 MukB, hinge domain VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Gene3D G3DSA:1.20.58.850 582 853 2.9E-132 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 PIRSF PIRSF005246 1 1487 0.0 T 15-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.2E-14 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Gene3D G3DSA:1.20.1060.30 668 779 2.9E-132 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Gene3D G3DSA:3.40.1140.10 1 227 4.6E-98 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Gene3D G3DSA:1.20.58.850 621 831 2.9E-132 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 Gene3D G3DSA:3.40.1140.10 1383 1469 1.5E-38 T 15-10-2018 VIBNI_A2104 d9f8a7b22134913f4f1d26176845b220 1489 SUPERFAMILY SSF52540 22 224 9.2E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Gene3D G3DSA:3.30.565.10 383 535 5.2E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Pfam PF00989 PAS fold 217 276 9.5E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 370 5.4E-9 T 15-10-2018 IPR039506 SpoOB, alpha-helical domain VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 SMART SM00091 214 280 0.0029 T 15-10-2018 IPR000014 PAS domain VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Gene3D G3DSA:3.30.450.20 200 313 3.4E-20 T 15-10-2018 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 532 2.2E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 SUPERFAMILY SSF55874 391 530 6.55E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 SUPERFAMILY SSF55785 218 307 1.57E-10 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Pfam PF17203 Single cache domain 3 39 169 4.4E-21 T 15-10-2018 IPR033463 Single cache domain 3 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 SUPERFAMILY SSF103190 41 170 3.65E-33 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 Gene3D G3DSA:3.30.450.20 34 165 5.7E-38 T 15-10-2018 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 9.7E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 9.7E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 9.7E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1848 a6349eabb7a8035f2e1e81176d30f20c 535 SMART SM00387 419 533 2.6E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 Pfam PF02576 RimP N-terminal domain 13 83 1.3E-29 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 2.3E-20 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 SUPERFAMILY SSF75420 2 83 4.97E-26 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.633 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 SUPERFAMILY SSF74942 84 151 1.83E-17 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VIBNI_A2799 478332f1da3faaeefb38723d8b024b51 151 Gene3D G3DSA:3.30.300.70 1 80 1.2E-26 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 Gene3D G3DSA:3.30.565.10 289 412 8.9E-8 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 SMART SM00388 225 287 3.5E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 Gene3D G3DSA:1.10.287.130 178 287 5.2E-17 T 15-10-2018 VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 284 7.1E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 SUPERFAMILY SSF55874 294 391 6.02E-11 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1642 3266355b8bf92cee21e418e9b4a480a6 419 SUPERFAMILY SSF47384 208 284 5.1E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 SUPERFAMILY SSF68923 11 227 6.8E-90 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 PIRSF PIRSF006294 4 540 9.9E-229 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 538 54.903 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Gene3D G3DSA:3.90.228.20 228 522 8.1E-230 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Gene3D G3DSA:3.40.449.10 61 227 8.1E-230 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Gene3D G3DSA:3.40.449.10 9 49 8.3E-7 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Gene3D G3DSA:2.170.8.10 50 342 8.1E-230 T 15-10-2018 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 15-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 1.3E-211 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 SUPERFAMILY SSF53795 229 540 1.37E-126 T 15-10-2018 VIBNI_A3383 76230c9495cfae57f283038176bf4f68 541 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 540 2.5E-279 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 SUPERFAMILY SSF53633 7 240 1.06E-71 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 Gene3D G3DSA:3.40.1160.10 3 242 1.1E-75 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 7.8E-102 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.739 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 PIRSF PIRSF005650 4 242 2.5E-88 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VIBNI_A2502 58ed85eb20fc49dee03a57f964c3c065 242 Pfam PF00696 Amino acid kinase family 11 219 1.8E-26 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_B0058 8f479fb95662dbfe8cd67c697ac1c53b 399 Pfam PF07690 Major Facilitator Superfamily 11 309 4.6E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0058 8f479fb95662dbfe8cd67c697ac1c53b 399 SUPERFAMILY SSF103473 8 385 1.27E-32 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0058 8f479fb95662dbfe8cd67c697ac1c53b 399 Gene3D G3DSA:1.20.1250.20 2 387 2.8E-26 T 15-10-2018 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 Gene3D G3DSA:3.40.640.10 58 296 4.2E-133 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 Gene3D G3DSA:3.90.1150.10 40 387 4.2E-133 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 Pfam PF00155 Aminotransferase class I and II 43 386 8.1E-71 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.7E-207 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.343 T 15-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VIBNI_B1269 0a2e20793d651153af706a2f307e4641 398 SUPERFAMILY SSF53383 4 396 4.92E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 2.0E-57 T 15-10-2018 VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 SUPERFAMILY SSF51735 7 254 8.92E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 Gene3D G3DSA:3.40.50.720 1 262 5.4E-73 T 15-10-2018 VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0759 5dfbdcc766a770ce1df6395a1088cfa3 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 202 0.0053 T 15-10-2018 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Gene3D G3DSA:3.40.50.12330 690 755 4.7E-18 T 15-10-2018 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SMART SM00387 442 560 1.4E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SUPERFAMILY SSF55874 384 554 4.58E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Gene3D G3DSA:3.40.50.2300 757 827 4.3E-21 T 15-10-2018 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 555 8.2E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 8.2E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 8.2E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 8.2E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SUPERFAMILY SSF47384 318 396 1.84E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SUPERFAMILY SSF52172 699 821 1.32E-35 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Pfam PF00072 Response regulator receiver domain 700 815 1.1E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Gene3D G3DSA:1.10.287.130 307 393 1.0E-28 T 15-10-2018 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 554 6.8E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Pfam PF00512 His Kinase A (phospho-acceptor) domain 330 395 2.9E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SMART SM00448 698 816 1.8E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 Gene3D G3DSA:3.30.565.10 394 561 1.1E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2452 4083eb82f11d671875e1ed040312a492 829 SMART SM00388 330 395 2.7E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 SUPERFAMILY SSF56235 1 196 1.2E-56 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 7.7E-40 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 Gene3D G3DSA:3.60.20.10 2 193 7.4E-70 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 3.6E-116 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 PIRSF PIRSF001589 1 378 3.9E-104 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 PIRSF PIRSF001589 363 509 3.1E-27 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 Gene3D G3DSA:3.40.50.620 194 514 1.6E-112 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 SUPERFAMILY SSF52402 208 479 1.42E-74 T 15-10-2018 VIBNI_A2595 8e963c2da99860abf8f060a6dc2d3c40 554 Pfam PF00733 Asparagine synthase 211 366 1.2E-56 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 SMART SM01081 32 200 1.5E-55 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 343 750 2.5E-96 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Gene3D G3DSA:2.60.40.10 810 873 5.1E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 219 336 2.9E-14 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 SUPERFAMILY SSF55545 214 342 8.97E-19 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 SUPERFAMILY SSF49384 24 203 3.98E-50 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 SUPERFAMILY SSF51445 343 758 3.62E-126 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Gene3D G3DSA:3.20.20.80 341 809 1.9E-151 T 15-10-2018 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 SUPERFAMILY SSF81296 773 871 1.11E-31 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Gene3D G3DSA:3.30.379.10 213 339 2.1E-19 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 796 869 8.1E-28 T 15-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 442 459 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 337 354 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 366 387 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 714 730 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 303 323 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 508 526 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 535 548 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 PRINTS PR00738 Glycosyl hydrolase family 20 signature 732 749 2.2E-44 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Pfam PF03173 Putative carbohydrate binding domain 34 198 6.2E-52 T 15-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_B0677 a3a1ff2e4db8f34814aea8fe34f7eb84 874 Gene3D G3DSA:2.60.40.290 23 159 6.9E-38 T 15-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VIBNI_A1834 1818ef2a38def7e787719263b6c6df7c 323 PIRSF PIRSF017082 1 323 5.1E-84 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_A1834 1818ef2a38def7e787719263b6c6df7c 323 Gene3D G3DSA:3.40.190.10 123 249 6.5E-60 T 15-10-2018 VIBNI_A1834 1818ef2a38def7e787719263b6c6df7c 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 1.2E-29 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_A1834 1818ef2a38def7e787719263b6c6df7c 323 Gene3D G3DSA:3.40.190.150 29 313 6.5E-60 T 15-10-2018 VIBNI_A1834 1818ef2a38def7e787719263b6c6df7c 323 SUPERFAMILY SSF53850 103 290 9.46E-8 T 15-10-2018 VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 Pfam PF13972 Bacterial transcriptional repressor 57 194 8.9E-37 T 15-10-2018 IPR025722 Bacterial transcriptional repressor TetR VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 Gene3D G3DSA:1.10.357.10 1 201 1.2E-60 T 15-10-2018 VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 8.9E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 SUPERFAMILY SSF46689 3 66 7.7E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3678 b38e21e0457a28f94e69871e88d62cf0 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 Pfam PF02634 FdhD/NarQ family 36 267 1.0E-73 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 15 268 25.907 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 Gene3D G3DSA:3.10.20.10 37 120 5.8E-11 T 15-10-2018 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 PIRSF PIRSF015626 2 272 1.2E-95 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 Gene3D G3DSA:3.40.140.10 123 275 5.5E-43 T 15-10-2018 VIBNI_A1710 fbb5c28124cacf6922eee9d5854f1cdb 275 SUPERFAMILY SSF53927 17 266 3.31E-70 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 282 1.4E-53 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.0E-19 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 3.0E-19 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 3.0E-19 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-19 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.0E-19 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 SUPERFAMILY SSF56014 623 798 2.09E-51 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 669 685 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 622 747 7.5E-19 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Pfam PF04324 BFD-like [2Fe-2S] binding domain 413 461 2.2E-13 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 SUPERFAMILY SSF55124 492 631 3.6E-27 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 550 611 2.8E-12 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 SUPERFAMILY SSF51905 3 191 6.48E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 790 0.0 T 15-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00397 Sirohaem Fe-binding site signature 626 644 8.6E-7 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00397 Sirohaem Fe-binding site signature 669 687 8.6E-7 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 SUPERFAMILY SSF51905 147 306 1.19E-26 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PIRSF PIRSF037149 1 824 0.0 T 15-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Gene3D G3DSA:3.50.50.60 108 243 8.9E-86 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Gene3D G3DSA:3.50.50.60 5 280 8.9E-86 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Gene3D G3DSA:3.30.413.10 621 781 4.8E-35 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.8E-8 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 2.8E-8 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 2.8E-8 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.8E-8 T 15-10-2018 VIBNI_B0169 e2db6449007a3bfee935d1db90707ba1 832 Gene3D G3DSA:1.10.10.1100 413 467 1.5E-12 T 15-10-2018 VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 SUPERFAMILY SSF46785 8 71 3.16E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 Pfam PF00480 ROK family 83 242 1.2E-17 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 Gene3D G3DSA:1.10.10.10 10 76 3.6E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 SUPERFAMILY SSF53067 81 339 6.48E-22 T 15-10-2018 VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 Gene3D G3DSA:3.30.420.40 82 201 8.0E-27 T 15-10-2018 VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 Pfam PF13412 Winged helix-turn-helix DNA-binding 14 54 2.4E-6 T 15-10-2018 VIBNI_A0302 2dd9947a2cd4240bd292d3feae319195 357 Gene3D G3DSA:3.30.420.40 202 248 8.0E-27 T 15-10-2018 VIBNI_A2546 597787d94d5f674f5f3bf39d42a31277 74 Gene3D G3DSA:1.10.10.10 1 61 1.4E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2546 597787d94d5f674f5f3bf39d42a31277 74 Pfam PF09012 FeoC like transcriptional regulator 2 52 5.2E-15 T 15-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VIBNI_A2546 597787d94d5f674f5f3bf39d42a31277 74 SUPERFAMILY SSF46785 1 54 1.42E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.1E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.1E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 1.1E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 1.1E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 SUPERFAMILY SSF56784 2 220 5.91E-37 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 195 2.2E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 Gene3D G3DSA:1.10.150.240 15 95 5.5E-79 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 Gene3D G3DSA:3.40.50.1000 3 215 5.5E-79 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A0482 9d763752e0f3473735f71dbff8e2ae3e 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 195 1.1E-21 T 15-10-2018 VIBNI_B0192 8ddc849926240e2cf7de50ab687b1f85 80 SUPERFAMILY SSF52833 1 66 1.06E-9 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0192 8ddc849926240e2cf7de50ab687b1f85 80 Gene3D G3DSA:3.40.30.10 1 74 1.5E-10 T 15-10-2018 VIBNI_B0192 8ddc849926240e2cf7de50ab687b1f85 80 Pfam PF00462 Glutaredoxin 3 60 1.5E-4 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_A2145 99cef0e7b726971e43325fe543241879 123 Gene3D G3DSA:3.10.180.10 6 119 6.8E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2145 99cef0e7b726971e43325fe543241879 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 116 2.6E-9 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A2145 99cef0e7b726971e43325fe543241879 123 SUPERFAMILY SSF54593 1 119 1.48E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 8.3E-95 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 SUPERFAMILY SSF54211 5 158 3.87E-45 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 SUPERFAMILY SSF55060 162 277 3.02E-33 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 31.073 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 PIRSF PIRSF010376 4 280 1.2E-85 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 Gene3D G3DSA:3.30.230.10 1 159 6.6E-54 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 2.6E-8 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 Gene3D G3DSA:3.30.70.890 162 280 9.9E-28 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_A2683 b70c36be935a3683f47e4186057aeec5 290 Pfam PF08544 GHMP kinases C terminal 206 258 1.9E-6 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00959 Mevalonate kinase family signature 120 142 5.8E-45 T 15-10-2018 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.8E-45 T 15-10-2018 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00959 Mevalonate kinase family signature 163 182 5.8E-45 T 15-10-2018 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00959 Mevalonate kinase family signature 329 346 5.8E-45 T 15-10-2018 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 SUPERFAMILY SSF54211 9 204 2.73E-63 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Gene3D G3DSA:3.30.230.10 23 202 1.2E-126 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 15-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Gene3D G3DSA:3.30.70.890 203 357 1.2E-126 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 SUPERFAMILY SSF55060 205 380 2.88E-48 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Pfam PF00288 GHMP kinases N terminal domain 115 182 1.1E-14 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00473 Galactokinase signature 113 131 7.7E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00473 Galactokinase signature 264 278 7.7E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00473 Galactokinase signature 28 46 7.7E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PRINTS PR00473 Galactokinase signature 93 104 7.7E-29 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 TIGRFAM TIGR00131 gal_kin: galactokinase 8 379 1.5E-134 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Pfam PF08544 GHMP kinases C terminal 281 354 3.0E-10 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Pfam PF10509 Galactokinase galactose-binding signature 10 59 2.8E-23 T 15-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 PIRSF PIRSF000530 1 384 7.4E-118 T 15-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_B1378 c0fa1fcd0f9f8953adac00fa1929a6a3 385 Hamap MF_00246 Galactokinase [galK]. 26 382 41.75 T 15-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 Pfam PF01252 Signal peptidase (SPase) II 19 161 6.4E-38 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 TIGRFAM TIGR00077 lspA: signal peptidase II 10 164 1.1E-47 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.785 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 6.2E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 6.2E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A0360 249993e39e79bf0cc0e91d475fd2e516 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 6.2E-18 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 SUPERFAMILY SSF53901 224 406 8.0E-26 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 SMART SM00825 Beta-ketoacyl synthase 6 375 0.0028 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 278 365 8.9E-15 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 SUPERFAMILY SSF53901 5 249 3.98E-28 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 Gene3D G3DSA:3.40.47.10 268 410 8.4E-21 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 Gene3D G3DSA:3.40.47.10 1 253 3.6E-32 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1158 86832f8b343fb6d13cd8e28cf18400f7 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 16 214 1.0E-15 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 Gene3D G3DSA:3.90.76.10 44 216 2.3E-142 T 15-10-2018 VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 Gene3D G3DSA:3.40.190.10 217 527 2.3E-142 T 15-10-2018 VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 Gene3D G3DSA:3.10.105.10 296 515 2.3E-142 T 15-10-2018 VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 456 2.2E-79 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 PIRSF PIRSF002741 1 539 5.2E-92 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A1359 1d3555d90385e3d55b5d63a0acbd3c57 540 SUPERFAMILY SSF53850 34 536 1.59E-130 T 15-10-2018 VIBNI_A2392 cdce145d66c5d7aa73bd5583a88faed0 527 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 527 370.779 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VIBNI_A2392 cdce145d66c5d7aa73bd5583a88faed0 527 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 4.1E-291 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VIBNI_A2392 cdce145d66c5d7aa73bd5583a88faed0 527 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 6.4E-287 T 15-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 Gene3D G3DSA:1.10.10.10 2 86 2.2E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 Gene3D G3DSA:3.40.190.290 94 298 2.6E-35 T 15-10-2018 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.0E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 SUPERFAMILY SSF53850 93 299 3.26E-38 T 15-10-2018 VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 Pfam PF03466 LysR substrate binding domain 91 298 4.0E-41 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0856 b0c7a051fc2b26aee21ab1af8bda7cd9 300 SUPERFAMILY SSF46785 5 113 4.99E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 Gene3D G3DSA:1.10.10.10 119 226 5.7E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 Gene3D G3DSA:3.40.50.2300 1 118 1.2E-37 T 15-10-2018 VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 SMART SM00448 1 112 1.4E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 Pfam PF00072 Response regulator receiver domain 3 111 1.3E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 SMART SM00862 147 222 1.9E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 SUPERFAMILY SSF52172 2 174 9.67E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0260 7b25c7c05bf5531f079b1c3167170ecb 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 1.2E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Gene3D G3DSA:2.40.110.10 180 303 6.5E-92 T 15-10-2018 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 64 176 1.4E-15 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Gene3D G3DSA:1.10.540.10 66 179 6.5E-92 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Pfam PF09317 Domain of unknown function (DUF1974) 458 742 8.3E-107 T 15-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 SUPERFAMILY SSF47203 304 456 9.83E-21 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 281 1.1E-9 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Gene3D G3DSA:1.20.140.10 304 449 6.5E-92 T 15-10-2018 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 304 450 2.0E-8 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VIBNI_A1107 1ce700985eff2b68f58f63bc30ab193e 763 SUPERFAMILY SSF56645 63 299 1.09E-46 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SMART SM00851 955 1041 3.5E-25 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF52335 936 1071 2.35E-34 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:3.30.470.20 119 403 8.6E-130 T 15-10-2018 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Pfam PF02142 MGS-like domain 956 1041 1.0E-15 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF52440 1 127 6.04E-50 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.112 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF52440 556 675 1.22E-49 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF56059 128 401 1.27E-108 T 15-10-2018 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:3.40.50.20 554 662 1.1E-49 T 15-10-2018 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:1.10.1030.10 404 553 2.7E-51 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF48108 396 554 4.84E-52 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:3.40.50.20 1 116 3.5E-50 T 15-10-2018 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.4E-40 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:3.40.50.1380 937 1072 1.6E-33 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SUPERFAMILY SSF56059 673 932 1.94E-103 T 15-10-2018 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 8.8E-38 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.388 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 SMART SM01096 424 547 9.4E-74 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0240 9047e6fbc320cc60f2e85b69c3d5fdc2 1076 Gene3D G3DSA:3.30.470.20 665 934 3.8E-124 T 15-10-2018 VIBNI_A2034 6b24114d2fbd6e4d9e9b0f51239140a1 183 Gene3D G3DSA:3.30.1380.10 66 183 2.6E-11 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A2034 6b24114d2fbd6e4d9e9b0f51239140a1 183 SUPERFAMILY SSF55166 69 183 1.52E-32 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A2034 6b24114d2fbd6e4d9e9b0f51239140a1 183 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 183 1.3E-66 T 15-10-2018 IPR010275 Protein of unknown function DUF882 VIBNI_A0552 88533391322ea9c42b9f27c85801fabf 142 Pfam PF02657 Fe-S metabolism associated domain 20 139 4.6E-44 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VIBNI_A0552 88533391322ea9c42b9f27c85801fabf 142 Gene3D G3DSA:3.90.1010.10 1 142 2.5E-48 T 15-10-2018 VIBNI_A0552 88533391322ea9c42b9f27c85801fabf 142 SUPERFAMILY SSF82649 3 141 6.28E-47 T 15-10-2018 VIBNI_A0552 88533391322ea9c42b9f27c85801fabf 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 1.2E-44 T 15-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VIBNI_B1840 fb646ba74f46591180f5965a5b38fe9d 262 SUPERFAMILY SSF141868 82 251 6.8E-17 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1840 fb646ba74f46591180f5965a5b38fe9d 262 Pfam PF00563 EAL domain 73 250 3.4E-12 T 15-10-2018 IPR001633 EAL domain VIBNI_B1840 fb646ba74f46591180f5965a5b38fe9d 262 Gene3D G3DSA:3.20.20.450 41 252 3.0E-16 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 Pfam PF06481 COX Aromatic Rich Motif 242 289 4.5E-7 T 15-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 SUPERFAMILY SSF49503 124 285 8.11E-48 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 150 225 1.4E-7 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 Gene3D G3DSA:2.60.40.420 117 289 2.6E-55 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 PIRSF PIRSF000292 2 294 1.2E-119 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 SUPERFAMILY SSF81464 31 120 5.72E-23 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 Gene3D G3DSA:1.10.287.90 32 116 1.3E-31 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1010 d1c73ded9e3c7e37ac8524ebdb9d25f1 295 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 20 242 1.1E-101 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 Gene3D G3DSA:3.40.1010.10 2 135 8.5E-34 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 SUPERFAMILY SSF53790 2 235 8.37E-43 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 220 1.7E-47 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 Gene3D G3DSA:3.30.950.10 137 260 4.8E-12 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 PIRSF PIRSF036427 2 243 7.3E-66 T 15-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 VIBNI_A0073 63ada0c34418b86a292aa53b384d5cbe 261 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 233 3.0E-67 T 15-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 6.2E-40 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Gene3D G3DSA:3.30.1370.100 522 611 2.0E-54 T 15-10-2018 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Gene3D G3DSA:2.30.42.20 478 656 2.0E-54 T 15-10-2018 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 SUPERFAMILY SSF54211 191 330 8.72E-38 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.3E-11 T 15-10-2018 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Pfam PF08676 MutL C terminal dimerisation domain 477 608 1.0E-27 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Gene3D G3DSA:3.30.565.10 1 216 8.5E-71 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 4.4E-102 T 15-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Gene3D G3DSA:3.30.230.10 217 329 5.2E-40 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 SUPERFAMILY SSF55874 1 204 2.36E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 SUPERFAMILY SSF118116 478 644 3.79E-35 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 657 25.059 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 SMART SM00853 481 619 8.1E-10 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VIBNI_A3220 7679cab451facc1ce215a86a5f4f09e8 659 SMART SM01340 212 330 6.0E-58 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 Gene3D G3DSA:3.40.190.10 26 300 1.3E-117 T 15-10-2018 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 SUPERFAMILY SSF53850 24 325 2.74E-67 T 15-10-2018 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 8.8E-21 T 15-10-2018 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 22 324 1.1E-142 T 15-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 Gene3D G3DSA:3.40.190.10 126 325 1.3E-117 T 15-10-2018 VIBNI_A3057 df2abdb7df057c4c40d6e98f5510b068 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 10 329 4.6E-147 T 15-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 4.4E-106 T 15-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 Pfam PF00005 ABC transporter 24 172 4.2E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 Gene3D G3DSA:3.40.50.300 2 232 2.5E-65 T 15-10-2018 VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 SMART SM00382 33 221 4.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1074 faae1e74d86feea16e7656f408a63cb9 232 SUPERFAMILY SSF52540 5 228 1.56E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2041 24958c2635642a079354aa49a6eb842d 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 198 37.307 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A2041 24958c2635642a079354aa49a6eb842d 198 Gene3D G3DSA:3.40.50.10990 4 174 1.6E-62 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A2041 24958c2635642a079354aa49a6eb842d 198 SUPERFAMILY SSF142695 17 173 5.23E-54 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A2041 24958c2635642a079354aa49a6eb842d 198 Pfam PF00925 GTP cyclohydrolase II 18 171 3.7E-58 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 SMART SM00420 6 58 2.7E-22 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.9E-51 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 Gene3D G3DSA:1.10.10.10 1 58 1.4E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 SUPERFAMILY SSF100950 74 233 5.56E-26 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 Gene3D G3DSA:3.30.750.70 69 137 1.6E-6 T 15-10-2018 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 SMART SM01134 72 233 1.5E-65 T 15-10-2018 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 SUPERFAMILY SSF46785 3 72 5.47E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 1.4E-22 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1801 4c4abaf28c06b69dd66cb994c7d2eb95 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 201 285 8.1E-15 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 580 673 3.1E-18 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 286 375 6.6E-16 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 385 476 7.0E-11 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 484 579 3.9E-17 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 592 635 4.1E-9 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 393 435 2.4E-6 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 497 545 4.7E-5 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 209 250 3.2E-4 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 102 149 3.5E-5 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF10531 SLBB domain 297 348 3.9E-12 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 93 4.5E-9 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.30.1950.10 44 99 5.3E-15 T 15-10-2018 VIBNI_A1488 a9aebd17c40644a6e7086569c5dce5a8 702 Gene3D G3DSA:3.10.560.10 104 180 5.3E-15 T 15-10-2018 VIBNI_A3751 1a47f2f07a3093192cf4866576807a39 405 SUPERFAMILY SSF103473 9 400 1.44E-31 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3751 1a47f2f07a3093192cf4866576807a39 405 Pfam PF07690 Major Facilitator Superfamily 19 276 3.0E-16 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A3751 1a47f2f07a3093192cf4866576807a39 405 Gene3D G3DSA:1.20.1250.20 8 201 3.3E-13 T 15-10-2018 VIBNI_A3751 1a47f2f07a3093192cf4866576807a39 405 Gene3D G3DSA:1.20.1250.20 208 405 5.0E-12 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00975 Thioesterase domain 3716 3933 6.4E-25 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 245 508 3.67E-57 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF53474 3703 3936 1.52E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2481 2631 2.3E-29 T 15-10-2018 IPR010060 Non-ribosomal peptide synthase VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF56801 1571 2102 1.57E-127 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 2171 2354 2.22E-30 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF47336 2083 2151 3.8E-14 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:1.10.1200.10 3603 3690 3.2E-18 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.10 71 433 4.6E-118 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF47336 1037 1109 1.44E-16 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.30 244 488 4.6E-118 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1605 2001 2.8E-113 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 548 947 9.8E-122 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3131 3528 3.9E-116 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3250 3261 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00668 Condensation domain 2166 2620 1.7E-56 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00668 Condensation domain 1128 1565 5.6E-91 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00668 Condensation domain 2645 3090 3.0E-87 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00668 Condensation domain 69 503 3.0E-89 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SMART SM00823 Phosphopantetheine attachment site 1043 1112 1.3E-6 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SMART SM00823 Phosphopantetheine attachment site 3620 3684 0.0083 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 1319 1556 1.1E-55 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 2643 2839 8.15E-31 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF56801 3075 3626 2.22E-126 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.40.50.12780 508 917 1.2E-119 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.40.50.12780 1571 1971 9.7E-111 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.40.50.12780 3098 3497 1.2E-119 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SMART SM00824 Thioesterase 3717 3936 0.0039 T 15-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.300.30 3498 3602 5.0E-27 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.300.30 918 1029 1.7E-27 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 ProSitePatterns PS00455 Putative AMP-binding domain signature. 672 683 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00550 Phosphopantetheine attachment site 3618 3679 6.4E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00550 Phosphopantetheine attachment site 2092 2151 9.9E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00550 Phosphopantetheine attachment site 1045 1108 4.2E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:1.10.1200.10 2082 2154 2.6E-20 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.10 1132 1502 1.1E-122 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF47336 3609 3680 1.96E-15 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.30 1310 1558 1.1E-122 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.30 2825 3086 2.5E-108 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.10 2650 3017 2.5E-108 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00501 AMP-binding enzyme 523 922 3.1E-97 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00501 AMP-binding enzyme 3110 3504 9.2E-85 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Pfam PF00501 AMP-binding enzyme 1587 1978 6.1E-83 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 72 240 4.97E-37 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 1133 1306 2.45E-37 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF56801 489 1055 5.36E-137 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:1.10.1200.10 1030 1115 1.4E-23 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1725 1736 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.40.50.1820 3704 3938 3.4E-39 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 2359 2608 2.45E-27 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.30 2344 2614 6.9E-46 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 SUPERFAMILY SSF52777 2824 3074 4.67E-47 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1067 1082 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.559.10 2155 2343 1.6E-41 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:1.10.10.1830 1 53 2.2E-6 T 15-10-2018 VIBNI_A1886 105508df95366ba5af7ca1dabd0d020b 3939 Gene3D G3DSA:3.30.300.30 1972 2079 4.8E-26 T 15-10-2018 VIBNI_A3218 0cb013c46b3d792731220d1dd2f15746 88 SUPERFAMILY SSF50182 7 69 2.7E-24 T 15-10-2018 IPR010920 LSM domain superfamily VIBNI_A3218 0cb013c46b3d792731220d1dd2f15746 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.3E-29 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VIBNI_A3218 0cb013c46b3d792731220d1dd2f15746 88 Gene3D G3DSA:2.30.30.100 1 72 1.8E-34 T 15-10-2018 VIBNI_A3218 0cb013c46b3d792731220d1dd2f15746 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.574 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VIBNI_A3218 0cb013c46b3d792731220d1dd2f15746 88 Pfam PF17209 Hfq protein 7 68 8.1E-31 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VIBNI_A1738 887398a700514627208649b964bcfa5e 248 SUPERFAMILY SSF51206 23 162 5.24E-32 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A1738 887398a700514627208649b964bcfa5e 248 SMART SM00100 30 151 4.5E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1738 887398a700514627208649b964bcfa5e 248 Gene3D G3DSA:1.10.10.10 165 246 1.9E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1738 887398a700514627208649b964bcfa5e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 5.0E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A1738 887398a700514627208649b964bcfa5e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 5.0E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A1738 887398a700514627208649b964bcfa5e 248 SUPERFAMILY SSF46785 165 244 4.86E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1738 887398a700514627208649b964bcfa5e 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 133 1.1E-16 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1738 887398a700514627208649b964bcfa5e 248 Gene3D G3DSA:2.60.120.10 43 164 4.5E-49 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1738 887398a700514627208649b964bcfa5e 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 7.9E-18 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A1738 887398a700514627208649b964bcfa5e 248 SMART SM00419 187 235 1.3E-14 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A1738 887398a700514627208649b964bcfa5e 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VIBNI_A3053 80fdf72edf3b52431aa3092922025c2d 101 Gene3D G3DSA:3.40.50.2300 2 101 9.4E-39 T 15-10-2018 VIBNI_A3053 80fdf72edf3b52431aa3092922025c2d 101 SUPERFAMILY SSF52794 1 101 4.71E-37 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VIBNI_A3053 80fdf72edf3b52431aa3092922025c2d 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.1E-23 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VIBNI_A3865 0b2af93b8b3924b793e59a1e365fc3f7 156 SUPERFAMILY SSF81573 63 121 1.44E-14 T 15-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VIBNI_A3865 0b2af93b8b3924b793e59a1e365fc3f7 156 Gene3D G3DSA:1.20.5.620 62 122 1.3E-22 T 15-10-2018 VIBNI_A3865 0b2af93b8b3924b793e59a1e365fc3f7 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.3E-35 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VIBNI_A3865 0b2af93b8b3924b793e59a1e365fc3f7 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.132 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VIBNI_A3865 0b2af93b8b3924b793e59a1e365fc3f7 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.8E-59 T 15-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Pfam PF00072 Response regulator receiver domain 3 115 9.3E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 SMART SM00331 164 377 8.7E-6 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Gene3D G3DSA:3.30.565.10 399 555 1.2E-6 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 SMART SM00448 1 115 6.4E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 SUPERFAMILY SSF52172 1 146 6.69E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 188 377 1.9E-36 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Pfam PF13581 Histidine kinase-like ATPase domain 438 548 1.1E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Gene3D G3DSA:3.40.50.2300 1 144 7.9E-30 T 15-10-2018 VIBNI_B0018 ce1f455df6adc3d8febf74984f9e87bf 556 Gene3D G3DSA:3.60.40.10 159 385 4.1E-37 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 Gene3D G3DSA:3.40.190.10 190 300 2.0E-9 T 15-10-2018 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 452 1.3E-62 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 Gene3D G3DSA:3.10.105.10 301 524 1.2E-69 T 15-10-2018 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 Gene3D G3DSA:3.90.76.10 59 178 5.7E-26 T 15-10-2018 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 PIRSF PIRSF002741 3 89 0.74 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 PIRSF PIRSF002741 91 557 4.3E-75 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B1096 396e89dcc74ad37758386cabbe9372d5 558 SUPERFAMILY SSF53850 24 554 5.25E-97 T 15-10-2018 VIBNI_A2208 df0af56148040db33ceaa219b665f65e 480 Pfam PF11066 Protein of unknown function (DUF2867) 334 467 3.7E-13 T 15-10-2018 IPR021295 Protein of unknown function DUF2867 VIBNI_A2208 df0af56148040db33ceaa219b665f65e 480 SUPERFAMILY SSF51735 1 296 3.2E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2208 df0af56148040db33ceaa219b665f65e 480 Pfam PF13460 NAD(P)H-binding 10 148 1.0E-12 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_A2208 df0af56148040db33ceaa219b665f65e 480 Gene3D G3DSA:3.40.50.720 5 248 1.4E-30 T 15-10-2018 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 1.2E-30 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 6.1E-9 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Gene3D G3DSA:3.40.50.720 1 193 2.9E-58 T 15-10-2018 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Gene3D G3DSA:1.20.5.100 194 220 3.4E-20 T 15-10-2018 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 SUPERFAMILY SSF48179 191 287 4.65E-31 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 PIRSF PIRSF000124 1 388 4.1E-137 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 PIRSF PIRSF500134 1 355 3.1E-123 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 PIRSF PIRSF500134 338 388 0.036 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.2E-103 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 SUPERFAMILY SSF51735 1 194 3.8E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 9.4E-28 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 SUPERFAMILY SSF52413 283 387 2.62E-28 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 Gene3D G3DSA:3.40.50.720 222 388 2.4E-69 T 15-10-2018 VIBNI_A3633 fb5bb78653a1f1bbd87e70eb85bfe363 388 SMART SM00984 300 387 2.2E-15 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Gene3D G3DSA:3.30.565.10 510 669 4.0E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Gene3D G3DSA:1.20.1480.50 319 418 6.4E-24 T 15-10-2018 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 619 4.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 4.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 605 4.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 4.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SMART SM00387 555 666 2.7E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Gene3D G3DSA:3.40.50.2300 703 846 5.3E-38 T 15-10-2018 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SUPERFAMILY SSF47384 428 509 3.92E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Pfam PF00072 Response regulator receiver domain 707 818 1.3E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SUPERFAMILY SSF55785 843 917 7.68E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SUPERFAMILY SSF55874 498 667 8.64E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SUPERFAMILY SSF52172 700 827 3.13E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 507 7.3E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 665 2.2E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Gene3D G3DSA:3.30.450.20 847 939 2.4E-7 T 15-10-2018 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SMART SM00388 441 509 6.2E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Gene3D G3DSA:1.10.287.130 427 509 5.5E-20 T 15-10-2018 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SMART SM00304 359 412 2.0E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SMART SM00091 856 921 1.2E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 Pfam PF00672 HAMP domain 361 409 1.7E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SMART SM00448 705 818 6.9E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2820 d87d5551d92f73c584518d71cea1ea56 1111 SUPERFAMILY SSF158472 360 409 3.14E-10 T 15-10-2018 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 15-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.3E-64 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.2E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.2E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.2E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.2E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.2E-42 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 7.6E-77 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 48.517 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 SUPERFAMILY SSF53098 3 156 1.16E-55 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2267 8a2bd92c76ee8d7ca895633a3682bcfc 173 Gene3D G3DSA:3.30.420.10 2 159 9.1E-53 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 SUPERFAMILY SSF54862 37 173 3.45E-29 T 15-10-2018 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 PIRSF PIRSF005784 3 188 4.5E-85 T 15-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 Pfam PF04060 Putative Fe-S cluster 44 75 2.8E-14 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 Gene3D G3DSA:1.10.15.40 38 82 2.1E-7 T 15-10-2018 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 186 7.3E-85 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 Gene3D G3DSA:3.30.70.20 83 181 3.6E-19 T 15-10-2018 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.1E-17 T 15-10-2018 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.101 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VIBNI_A0908 9417c39694ffb9c58ac8f04bd2bb57c9 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A0535 0beef6f1c3f1a9178ac7de845112e76a 229 Pfam PF03475 3-alpha domain 174 215 8.1E-7 T 15-10-2018 IPR005163 3-alpha domain VIBNI_A0535 0beef6f1c3f1a9178ac7de845112e76a 229 SUPERFAMILY SSF50800 3 227 2.46E-72 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_A0535 0beef6f1c3f1a9178ac7de845112e76a 229 Gene3D G3DSA:2.40.33.20 1 229 1.1E-70 T 15-10-2018 VIBNI_A0535 0beef6f1c3f1a9178ac7de845112e76a 229 Pfam PF03473 MOSC domain 49 163 1.7E-22 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 SMART SM00354 1 71 1.2E-32 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 SUPERFAMILY SSF53822 61 330 1.19E-84 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 Gene3D G3DSA:3.40.50.2300 63 321 6.8E-73 T 15-10-2018 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 Gene3D G3DSA:1.10.260.40 1 59 4.8E-22 T 15-10-2018 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 SUPERFAMILY SSF47413 1 60 4.69E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 5.3E-38 T 15-10-2018 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 Gene3D G3DSA:3.40.50.2300 160 326 6.8E-73 T 15-10-2018 VIBNI_B1365 89ef0c8ca00c7c546fc772611dab29f9 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 VIBNI_A1118 e534ac6560b0ed70f1048867e38d7349 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 7.7E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1118 e534ac6560b0ed70f1048867e38d7349 347 SUPERFAMILY SSF161098 139 325 5.76E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1118 e534ac6560b0ed70f1048867e38d7349 347 Gene3D G3DSA:1.10.3720.10 133 339 1.0E-18 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1849 da7b9ec8e7658e191802a371eef73993 322 SUPERFAMILY SSF53850 137 259 6.7E-5 T 15-10-2018 VIBNI_B1849 da7b9ec8e7658e191802a371eef73993 322 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 306 3.6E-38 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B1849 da7b9ec8e7658e191802a371eef73993 322 Gene3D G3DSA:3.40.190.170 22 322 1.5E-85 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 Pfam PF04352 ProQ/FINO family 8 115 1.3E-41 T 15-10-2018 IPR016103 ProQ/FinO domain VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 SMART SM00945 5 119 3.6E-58 T 15-10-2018 IPR016103 ProQ/FinO domain VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 Pfam PF17516 ProQ C-terminal domain 161 208 9.0E-22 T 15-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 SUPERFAMILY SSF48657 5 119 1.09E-37 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 29.324 T 15-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VIBNI_A1793 f0be559abc9d844604f1e6cd98a459ef 209 Gene3D G3DSA:1.10.1710.10 1 116 3.3E-23 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily VIBNI_A2184 08329be99b0ad00ee1d60663dbed5ca8 314 Gene3D G3DSA:3.20.20.370 32 303 3.2E-62 T 15-10-2018 VIBNI_A2184 08329be99b0ad00ee1d60663dbed5ca8 314 SUPERFAMILY SSF88713 36 302 1.56E-51 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A2184 08329be99b0ad00ee1d60663dbed5ca8 314 Pfam PF04794 YdjC-like protein 37 291 3.7E-44 T 15-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 SUPERFAMILY SSF75217 1 154 2.98E-50 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.1E-77 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 Gene3D G3DSA:3.40.1280.10 1 156 6.7E-53 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 PIRSF PIRSF004505 1 155 7.9E-44 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.3E-48 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VIBNI_A2713 ab78887f03b161db05d88271d546eeb5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.568 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VIBNI_B1842 d5fc699b6d7cdca966c937cf869466ba 294 Pfam PF00892 EamA-like transporter family 9 136 4.5E-17 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1842 d5fc699b6d7cdca966c937cf869466ba 294 Pfam PF00892 EamA-like transporter family 150 281 4.6E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1842 d5fc699b6d7cdca966c937cf869466ba 294 SUPERFAMILY SSF103481 188 284 2.22E-15 T 15-10-2018 VIBNI_B1842 d5fc699b6d7cdca966c937cf869466ba 294 SUPERFAMILY SSF103481 38 139 1.7E-12 T 15-10-2018 VIBNI_B1835 22976f3eb908666035e5112f091b74af 696 SUPERFAMILY SSF52833 575 673 1.93E-13 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1835 22976f3eb908666035e5112f091b74af 696 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 305 500 4.8E-9 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VIBNI_B1835 22976f3eb908666035e5112f091b74af 696 Pfam PF13899 Thioredoxin-like 588 669 8.1E-11 T 15-10-2018 VIBNI_B1835 22976f3eb908666035e5112f091b74af 696 Gene3D G3DSA:3.40.30.10 565 683 2.5E-10 T 15-10-2018 VIBNI_B1835 22976f3eb908666035e5112f091b74af 696 Pfam PF11412 Disulphide bond corrector protein DsbC 60 161 2.1E-15 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Pfam PF04851 Type III restriction enzyme, res subunit 268 428 2.2E-16 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 SUPERFAMILY SSF52540 218 476 1.41E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Gene3D G3DSA:3.40.50.300 265 456 1.4E-47 T 15-10-2018 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 SMART SM00487 262 473 7.6E-6 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 717 3.2E-151 T 15-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Gene3D G3DSA:3.90.1570.50 100 262 7.2E-26 T 15-10-2018 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Gene3D G3DSA:3.40.50.300 457 712 8.3E-39 T 15-10-2018 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Pfam PF11867 Domain of unknown function (DUF3387) 731 1047 3.2E-32 T 15-10-2018 IPR021810 Protein of unknown function DUF3387 VIBNI_A3439 71c0516c7a3c0906197cb8aa4dcdc0f1 1064 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 208 3.1E-34 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VIBNI_A2169 823177949af98f31b569866951152859 182 PIRSF PIRSF016661 1 178 1.3E-41 T 15-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 VIBNI_A2169 823177949af98f31b569866951152859 182 Gene3D G3DSA:1.10.1760.20 2 177 8.7E-49 T 15-10-2018 VIBNI_A2169 823177949af98f31b569866951152859 182 Pfam PF02632 BioY family 29 170 5.0E-34 T 15-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 VIBNI_B1860 0ba70778388bac7d9dd4698143d75866 309 Pfam PF15541 Bacterial toxin 4 184 289 4.8E-61 T 15-10-2018 IPR029102 Bacterial toxin 4 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.5E-26 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.819 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 15-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 SUPERFAMILY SSF143034 2 63 1.57E-20 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 Gene3D G3DSA:2.40.50.530 4 63 2.0E-18 T 15-10-2018 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 Pfam PF01632 Ribosomal protein L35 2 61 2.7E-21 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.9E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VIBNI_A2087 7aaf1988567b0f63ffe8b659a8dc5ecd 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.9E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 SMART SM00345 9 68 1.6E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 SUPERFAMILY SSF46785 5 72 9.1E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 4.9E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 SMART SM00895 97 222 8.2E-18 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 Pfam PF07729 FCD domain 98 220 1.7E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 Gene3D G3DSA:1.20.120.530 94 229 4.4E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 SUPERFAMILY SSF48008 97 224 3.66E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1753 1d2b422105807256c3e499fbba45cc6c 238 Gene3D G3DSA:1.10.10.10 2 68 2.7E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.6E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.6E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.6E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 6.6E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.6E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 9.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 SUPERFAMILY SSF51735 1 228 1.24E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 Pfam PF00106 short chain dehydrogenase 3 189 2.7E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0857 fbfbbc1190e50b4b79d1c5318b180bf4 228 Gene3D G3DSA:3.40.50.720 1 228 1.8E-62 T 15-10-2018 VIBNI_A0325 70cc1eb45394fbe0e3bf1f3ef896bb38 344 Gene3D G3DSA:3.20.20.100 1 344 8.5E-135 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A0325 70cc1eb45394fbe0e3bf1f3ef896bb38 344 SUPERFAMILY SSF51430 1 344 1.07E-111 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A0325 70cc1eb45394fbe0e3bf1f3ef896bb38 344 Pfam PF00248 Aldo/keto reductase family 15 335 6.1E-77 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain VIBNI_A1674 325c93840d81cce2f7eb57e10029c005 232 SUPERFAMILY SSF161098 8 221 1.7E-30 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1674 325c93840d81cce2f7eb57e10029c005 232 Gene3D G3DSA:1.10.3720.10 1 229 3.1E-28 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1674 325c93840d81cce2f7eb57e10029c005 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 217 1.8E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0082 b16600cb1f80e906ab7fee7756ab1162 277 SUPERFAMILY SSF161098 11 277 2.62E-67 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0082 b16600cb1f80e906ab7fee7756ab1162 277 Gene3D G3DSA:1.10.3720.10 3 269 5.3E-57 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0082 b16600cb1f80e906ab7fee7756ab1162 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 263 3.7E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Gene3D G3DSA:3.30.70.3380 368 478 2.8E-39 T 15-10-2018 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Gene3D G3DSA:3.30.70.870 286 367 2.3E-35 T 15-10-2018 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.1E-49 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 SUPERFAMILY SSF54980 292 370 2.52E-18 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Pfam PF00679 Elongation factor G C-terminus 399 482 3.1E-19 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.9E-10 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Gene3D G3DSA:2.40.30.10 186 285 7.3E-34 T 15-10-2018 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 SMART SM00838 398 486 0.0051 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Gene3D G3DSA:3.30.70.2570 479 553 9.2E-33 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.0E-52 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 SUPERFAMILY SSF54980 399 493 3.64E-24 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 SUPERFAMILY SSF52540 2 233 9.75E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Gene3D G3DSA:3.40.50.300 1 185 2.6E-71 T 15-10-2018 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 4.3E-17 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.687 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.7E-300 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0112 e579e2b4bf51ab24d2c5e9b817c0c826 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_B1296 b2415dc2c9a8cab7684bded0bb405c22 365 Pfam PF13407 Periplasmic binding protein domain 70 324 2.8E-14 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B1296 b2415dc2c9a8cab7684bded0bb405c22 365 SUPERFAMILY SSF53822 27 365 4.85E-78 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1296 b2415dc2c9a8cab7684bded0bb405c22 365 Gene3D G3DSA:3.40.50.2300 180 360 1.4E-143 T 15-10-2018 VIBNI_B1296 b2415dc2c9a8cab7684bded0bb405c22 365 Gene3D G3DSA:3.40.50.2300 33 364 1.4E-143 T 15-10-2018 VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 SUPERFAMILY SSF54211 9 167 1.86E-29 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 SUPERFAMILY SSF52540 191 501 7.51E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.4E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.4E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.4E-5 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 391 5.5E-89 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 Gene3D G3DSA:3.30.230.10 1 163 1.6E-6 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 SMART SM00382 210 390 3.9E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.5E-29 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 4.6E-204 T 15-10-2018 IPR004482 Mg chelatase-related protein VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 Gene3D G3DSA:3.40.50.300 176 501 2.3E-56 T 15-10-2018 VIBNI_A3849 65c29a9f4c8fe79b1bc7081be6722169 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 6.6E-48 T 15-10-2018 VIBNI_B0633 a900575f997cc42c6ca5f3d9b74c1a0f 167 SUPERFAMILY SSF55729 3 161 1.99E-38 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0633 a900575f997cc42c6ca5f3d9b74c1a0f 167 Gene3D G3DSA:3.40.630.30 1 163 2.1E-42 T 15-10-2018 VIBNI_B0633 a900575f997cc42c6ca5f3d9b74c1a0f 167 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 1.9E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 3.1E-110 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 PIRSF PIRSF001365 1 293 2.1E-93 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 Gene3D G3DSA:3.20.20.70 1 292 2.1E-110 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 SUPERFAMILY SSF51569 2 290 6.18E-100 T 15-10-2018 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 SMART SM01130 1 290 2.4E-139 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 1.5E-115 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.5E-35 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.5E-35 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.5E-35 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.5E-35 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A0691 7cf7da5749b6ad1d08671cfd1a65845b 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.625 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A2645 88bbe207d1712879760d13ace4a36376 257 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 123 255 1.3E-35 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VIBNI_A2645 88bbe207d1712879760d13ace4a36376 257 Gene3D G3DSA:2.30.30.760 182 257 5.3E-11 T 15-10-2018 VIBNI_A2645 88bbe207d1712879760d13ace4a36376 257 Pfam PF13144 Chaperone for flagella basal body P-ring formation 58 255 3.5E-49 T 15-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VIBNI_A2645 88bbe207d1712879760d13ace4a36376 257 SMART SM00858 135 197 1.7E-6 T 15-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 2.4E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 Gene3D G3DSA:3.40.190.10 122 284 1.3E-11 T 15-10-2018 VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 SUPERFAMILY SSF53850 101 297 1.34E-21 T 15-10-2018 VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 Gene3D G3DSA:3.40.190.10 179 273 1.3E-11 T 15-10-2018 VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 Pfam PF03466 LysR substrate binding domain 100 297 2.2E-19 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 SUPERFAMILY SSF46785 13 98 3.46E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2103 e280f13bd156c79ced6b2ea7b75cd55b 298 Gene3D G3DSA:1.10.10.10 13 99 5.5E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Gene3D G3DSA:3.30.50.30 2 53 1.5E-26 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 SUPERFAMILY SSF52540 63 404 3.28E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 SMART SM00994 13 52 1.0E-24 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 15-10-2018 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Gene3D G3DSA:1.10.8.60 318 426 6.3E-41 T 15-10-2018 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 SMART SM01086 319 414 4.5E-34 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 4.2E-17 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.164 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 SMART SM00382 113 266 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 5.8E-208 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 8.3E-49 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2427 e144ef7f5431e160e5465c1dda7f0a98 426 Gene3D G3DSA:3.40.50.300 59 317 1.5E-107 T 15-10-2018 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.8E-28 T 15-10-2018 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.8E-28 T 15-10-2018 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.8E-28 T 15-10-2018 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 110 16.785 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 4.0E-32 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VIBNI_A3412 851eae2713872a0c1587601a92f3d328 112 Pfam PF02416 mttA/Hcf106 family 4 41 7.7E-5 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 Pfam PF00107 Zinc-binding dehydrogenase 174 303 1.1E-23 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 Gene3D G3DSA:3.90.180.10 12 328 1.4E-92 T 15-10-2018 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 131 5.5E-31 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 SUPERFAMILY SSF50129 3 173 4.57E-51 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 SMART SM00829 13 338 1.3E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 Gene3D G3DSA:3.40.50.720 151 288 1.4E-92 T 15-10-2018 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_B0419 8415166924d3e34e5d8f901e0f08d964 345 SUPERFAMILY SSF51735 139 304 5.59E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1173 1d0fc385af4ac9eac257f7f84abbd121 338 SMART SM00267 167 335 2.0E-48 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1173 1d0fc385af4ac9eac257f7f84abbd121 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 334 5.7E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1173 1d0fc385af4ac9eac257f7f84abbd121 338 Gene3D G3DSA:3.30.70.270 165 336 2.8E-46 T 15-10-2018 VIBNI_A1173 1d0fc385af4ac9eac257f7f84abbd121 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 331 3.9E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1173 1d0fc385af4ac9eac257f7f84abbd121 338 SUPERFAMILY SSF55073 183 336 2.51E-40 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 Gene3D G3DSA:3.30.70.980 131 202 2.7E-44 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 Pfam PF01709 Transcriptional regulator 5 236 4.7E-71 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.834 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 Gene3D G3DSA:3.30.70.980 83 235 2.7E-44 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 SUPERFAMILY SSF75625 1 237 2.35E-74 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0114 3b2ca69413937094f170b5ddf005498b 238 Gene3D G3DSA:1.10.10.200 17 78 1.9E-16 T 15-10-2018 IPR017856 Integrase-like, N-terminal VIBNI_A1393 8101f3a557aa7f73fbdaa1ef69f52298 98 Gene3D G3DSA:3.30.70.1060 1 98 4.8E-39 T 15-10-2018 VIBNI_A1393 8101f3a557aa7f73fbdaa1ef69f52298 98 SUPERFAMILY SSF54909 1 98 2.15E-32 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A1393 8101f3a557aa7f73fbdaa1ef69f52298 98 Pfam PF03795 YCII-related domain 1 95 2.5E-30 T 15-10-2018 IPR005545 YCII-related VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 Gene3D G3DSA:1.10.760.10 110 205 6.9E-25 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 Pfam PF00034 Cytochrome c 31 104 5.7E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 Pfam PF00034 Cytochrome c 118 201 2.9E-7 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 PIRSF PIRSF000005 1 205 9.2E-61 T 15-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 SUPERFAMILY SSF46626 114 203 1.37E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 4.4E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 4.4E-5 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 Gene3D G3DSA:1.10.760.10 19 108 6.4E-24 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3402 45ccbe0ab2f6480581291f270237760e 205 SUPERFAMILY SSF46626 9 105 4.8E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 312 1.9E-35 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Gene3D G3DSA:1.10.10.10 246 323 2.2E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Pfam PF04539 Sigma-70 region 3 169 242 2.2E-21 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 SUPERFAMILY SSF88659 219 318 5.61E-23 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 3.8E-139 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 1.4E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 1.4E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 1.4E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 1.4E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 1.4E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 SUPERFAMILY SSF88659 162 235 2.83E-15 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Pfam PF04542 Sigma-70 region 2 89 158 7.8E-20 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 SUPERFAMILY SSF88946 51 159 5.36E-45 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Gene3D G3DSA:1.10.601.10 2 161 9.2E-48 T 15-10-2018 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 26 323 39.513 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Pfam PF04545 Sigma-70, region 4 257 310 1.8E-17 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0137 8a1cf2a6fa993a7159a388eff65fa309 328 Gene3D G3DSA:1.10.10.10 162 236 2.2E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2202 57e33f28c8a2872376ff153835773d89 389 Gene3D G3DSA:1.20.1530.10 3 380 5.2E-146 T 15-10-2018 IPR023171 Na/H antiporter domain superfamily VIBNI_A2202 57e33f28c8a2872376ff153835773d89 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.326 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VIBNI_A2202 57e33f28c8a2872376ff153835773d89 389 Pfam PF06965 Na+/H+ antiporter 1 7 373 4.2E-143 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VIBNI_A2202 57e33f28c8a2872376ff153835773d89 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 4.9E-181 T 15-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 SUPERFAMILY SSF110324 2 80 6.98E-35 T 15-10-2018 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-18 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 Pfam PF01016 Ribosomal L27 protein 2 82 8.3E-40 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.2E-40 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.2E-40 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.2E-40 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 Gene3D G3DSA:2.40.50.100 21 85 1.5E-31 T 15-10-2018 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.708 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2925 59d70159427be0811cc8f9ba3e7572d7 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 4.6E-44 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 SUPERFAMILY SSF52540 5 432 1.58E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Pfam PF13538 UvrD-like helicase C-terminal domain 615 659 1.1E-14 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Pfam PF13604 AAA domain 224 413 2.9E-32 T 15-10-2018 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Gene3D G3DSA:3.40.50.300 437 554 4.4E-26 T 15-10-2018 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Gene3D G3DSA:3.40.50.300 555 675 9.0E-29 T 15-10-2018 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 684 50.336 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Gene3D G3DSA:1.10.10.1020 1 113 6.1E-22 T 15-10-2018 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 Gene3D G3DSA:3.40.50.300 190 427 1.8E-73 T 15-10-2018 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 686 7.6E-211 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 SMART SM00382 232 391 0.0046 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0547 dcf6e1ffafd54fd3e2646c9668c97201 687 SUPERFAMILY SSF52540 351 685 1.33E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0191 05fb47d1405236f354f13f94ab483afe 310 SUPERFAMILY SSF47240 6 297 5.12E-96 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_B0191 05fb47d1405236f354f13f94ab483afe 310 Pfam PF00268 Ribonucleotide reductase, small chain 7 273 1.4E-101 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0191 05fb47d1405236f354f13f94ab483afe 310 Gene3D G3DSA:1.10.620.20 2 298 9.6E-113 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 Pfam PF03466 LysR substrate binding domain 89 288 4.2E-45 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 SUPERFAMILY SSF46785 6 88 3.33E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.7E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 Gene3D G3DSA:1.10.10.10 3 91 5.2E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 SUPERFAMILY SSF53850 90 288 4.52E-47 T 15-10-2018 VIBNI_A0639 2a0b30a5082388828965e003448cc3ab 293 Gene3D G3DSA:3.40.190.290 92 287 9.5E-67 T 15-10-2018 VIBNI_A1706 bc54c0b5fe5e047a124923922c32e970 147 SUPERFAMILY SSF55729 4 135 1.36E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1706 bc54c0b5fe5e047a124923922c32e970 147 Pfam PF00583 Acetyltransferase (GNAT) family 21 134 1.1E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1706 bc54c0b5fe5e047a124923922c32e970 147 Gene3D G3DSA:3.40.630.30 3 140 1.3E-30 T 15-10-2018 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 SUPERFAMILY SSF52540 346 583 7.55E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 431 446 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 369 382 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 599 616 9.4E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 616 636 9.4E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Gene3D G3DSA:1.10.10.60 599 636 5.4E-7 T 15-10-2018 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Gene3D G3DSA:3.30.450.40 24 215 9.2E-43 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Pfam PF02954 Bacterial regulatory protein, Fis family 602 632 4.7E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 SMART SM00382 365 508 7.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Gene3D G3DSA:3.40.50.300 335 516 3.6E-60 T 15-10-2018 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Pfam PF01590 GAF domain 79 199 4.3E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 SUPERFAMILY SSF55781 68 213 6.54E-5 T 15-10-2018 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 SUPERFAMILY SSF46689 601 635 1.19E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Pfam PF00158 Sigma-54 interaction domain 348 511 1.2E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 Gene3D G3DSA:1.10.8.60 517 590 1.6E-13 T 15-10-2018 VIBNI_A0875 4dcc23cc64d1ccd39fecdc6867803f29 641 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 553 562 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 2.0E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Gene3D G3DSA:1.10.8.60 311 375 1.6E-16 T 15-10-2018 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 SMART SM00382 160 275 2.3E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Gene3D G3DSA:3.40.50.2300 1 130 1.1E-33 T 15-10-2018 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Pfam PF00072 Response regulator receiver domain 5 114 4.0E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 SUPERFAMILY SSF52172 4 183 7.83E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 SUPERFAMILY SSF46689 388 440 7.17E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Pfam PF00158 Sigma-54 interaction domain 140 306 1.3E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Gene3D G3DSA:3.40.50.300 131 310 1.3E-57 T 15-10-2018 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 SMART SM00448 3 114 1.2E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 Gene3D G3DSA:1.10.10.60 383 443 5.2E-13 T 15-10-2018 VIBNI_B1173 c3c23e82f13a1f38ca1c35db9eab3479 448 SUPERFAMILY SSF52540 140 371 6.23E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 SUPERFAMILY SSF52374 28 346 4.5E-101 T 15-10-2018 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.6E-297 T 15-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Gene3D G3DSA:2.40.240.10 348 466 3.8E-83 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 SUPERFAMILY SSF50715 340 548 5.23E-79 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.745 T 15-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Gene3D G3DSA:3.90.800.10 101 209 4.1E-105 T 15-10-2018 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Gene3D G3DSA:1.10.1160.10 261 339 2.8E-36 T 15-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Gene3D G3DSA:2.40.240.10 340 547 3.8E-83 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Gene3D G3DSA:3.40.50.620 30 247 4.1E-105 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 5.9E-126 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VIBNI_A2579 d01b7483cdfe55dae7c8a99e28a883e1 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 7.0E-65 T 15-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_B1271 ee1df7513005ef6231030bf4019d2e14 465 PIRSF PIRSF006603 1 437 4.8E-99 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B1271 ee1df7513005ef6231030bf4019d2e14 465 Pfam PF01554 MatE 20 180 1.8E-27 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B1271 ee1df7513005ef6231030bf4019d2e14 465 Pfam PF01554 MatE 245 406 2.3E-25 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B1271 ee1df7513005ef6231030bf4019d2e14 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 412 3.5E-57 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B1547 24857385142946e26764ca63e43a0f05 289 Pfam PF00892 EamA-like transporter family 146 272 5.3E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1547 24857385142946e26764ca63e43a0f05 289 Pfam PF00892 EamA-like transporter family 2 134 3.3E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1547 24857385142946e26764ca63e43a0f05 289 SUPERFAMILY SSF103481 178 277 6.15E-13 T 15-10-2018 VIBNI_B1547 24857385142946e26764ca63e43a0f05 289 SUPERFAMILY SSF103481 40 137 3.27E-12 T 15-10-2018 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 492 1.4E-66 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 SUPERFAMILY SSF53613 229 493 4.73E-75 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Pfam PF01256 Carbohydrate kinase 249 486 4.2E-60 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 226 496 22.661 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 209 1.5E-47 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 SUPERFAMILY SSF64153 7 247 2.22E-63 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 PIRSF PIRSF017184 6 496 4.6E-138 T 15-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Gene3D G3DSA:3.40.1190.20 220 495 2.1E-83 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 10 211 24.651 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Gene3D G3DSA:3.40.50.10260 4 217 5.7E-60 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 Pfam PF03853 YjeF-related protein N-terminus 31 190 4.9E-43 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VIBNI_B1340 2a778d259d807e96bb8147de8ddc3cc6 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 431 441 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site VIBNI_A1245 159e104f559342b6a9ab87739bd882ae 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 278 1.4E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1245 159e104f559342b6a9ab87739bd882ae 286 SUPERFAMILY SSF161098 10 286 3.18E-75 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1245 159e104f559342b6a9ab87739bd882ae 286 Gene3D G3DSA:1.10.3720.10 2 273 8.4E-67 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2060 88b790acd0185ef7b4fd029baa23c0c6 245 Gene3D G3DSA:3.40.190.10 28 236 3.4E-13 T 15-10-2018 VIBNI_A2060 88b790acd0185ef7b4fd029baa23c0c6 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 94 240 2.4E-11 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2060 88b790acd0185ef7b4fd029baa23c0c6 245 SUPERFAMILY SSF53850 22 238 5.63E-26 T 15-10-2018 VIBNI_A2060 88b790acd0185ef7b4fd029baa23c0c6 245 Gene3D G3DSA:3.40.190.10 105 205 3.4E-13 T 15-10-2018 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SMART SM00955 193 523 4.7E-112 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Gene3D G3DSA:2.40.50.640 83 157 1.1E-30 T 15-10-2018 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Pfam PF00575 S1 RNA binding domain 566 645 1.9E-7 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Pfam PF00773 RNB domain 193 521 1.7E-83 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SUPERFAMILY SSF50249 192 562 8.0E-105 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SMART SM00316 566 650 2.8E-4 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Pfam PF08206 Ribonuclease B OB domain 24 80 8.7E-17 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 41.729 T 15-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 3.7E-179 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Gene3D G3DSA:2.40.50.140 1 82 9.1E-28 T 15-10-2018 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SMART SM00357 23 79 1.0E-9 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SUPERFAMILY SSF50249 568 649 9.8E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SUPERFAMILY SSF50249 8 80 1.08E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 SUPERFAMILY SSF50249 83 173 7.28E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 Gene3D G3DSA:2.40.50.140 565 651 2.0E-29 T 15-10-2018 VIBNI_B1076 15cf0000f2b96a13ec420eaa878572de 656 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Gene3D G3DSA:3.40.190.10 36 93 2.2E-16 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 650 1.5E-30 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 647 2.0E-29 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SUPERFAMILY SSF55073 508 652 4.55E-29 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SMART SM00267 492 653 4.7E-25 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Gene3D G3DSA:3.40.190.10 236 461 6.7E-27 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Gene3D G3DSA:3.40.190.10 94 167 2.2E-16 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Gene3D G3DSA:3.40.190.10 328 425 6.7E-27 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 193 3.2E-17 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SUPERFAMILY SSF53850 36 213 1.09E-21 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SUPERFAMILY SSF53850 243 462 6.99E-31 T 15-10-2018 VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 248 453 2.3E-23 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SMART SM00062 241 464 3.0E-4 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 SMART SM00062 21 222 9.2E-4 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0943 af873e008d878e1dfe670aaaf7feff82 655 Gene3D G3DSA:3.30.70.270 497 653 6.1E-33 T 15-10-2018 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 Gene3D G3DSA:3.40.47.10 4 267 2.2E-155 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.5E-145 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.4E-84 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.2E-50 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 SUPERFAMILY SSF53901 1 259 1.63E-82 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 Gene3D G3DSA:3.40.47.10 127 381 2.2E-155 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.465 T 15-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 PIRSF PIRSF000429 1 388 9.9E-135 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 SUPERFAMILY SSF53901 263 386 8.65E-45 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0031 abf4630b5566e7cc4963807a68c32087 388 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 4.6E-241 T 15-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VIBNI_B2100 baab790bad63ade6e23bef1d728b2454 386 Gene3D G3DSA:3.40.50.1970 2 183 3.1E-53 T 15-10-2018 VIBNI_B2100 baab790bad63ade6e23bef1d728b2454 386 SUPERFAMILY SSF56796 6 385 7.85E-122 T 15-10-2018 VIBNI_B2100 baab790bad63ade6e23bef1d728b2454 386 Gene3D G3DSA:1.20.1090.10 185 386 3.1E-65 T 15-10-2018 VIBNI_B2100 baab790bad63ade6e23bef1d728b2454 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 376 6.9E-119 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_B2100 baab790bad63ade6e23bef1d728b2454 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 Pfam PF06303 MatP N-terminal domain 2 85 1.9E-42 T 15-10-2018 IPR035087 MatP, N-terminal VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 Gene3D G3DSA:1.10.1220.10 98 149 2.2E-23 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 Gene3D G3DSA:1.20.1270.380 1 89 4.4E-47 T 15-10-2018 IPR038339 MatP, N-terminal domain superfamily VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 4.1E-27 T 15-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 2.0E-61 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VIBNI_A1777 01bffc5ef84a2b1f070bc9f5a95fba84 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.579 T 15-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 Gene3D G3DSA:1.10.10.60 169 229 4.3E-12 T 15-10-2018 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 SMART SM00342 187 269 3.3E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 Pfam PF12852 Cupin 2 155 6.6E-23 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 Gene3D G3DSA:1.10.10.60 230 276 8.6E-8 T 15-10-2018 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 Pfam PF12833 Helix-turn-helix domain 193 268 2.5E-14 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 SUPERFAMILY SSF46689 223 269 2.55E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1803 9f282765eb523e3a8bb9907fa4f08fa2 280 SUPERFAMILY SSF46689 170 220 5.95E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3800 f3c778aad3db1d7b11aee8d8ab61d157 297 Pfam PF00892 EamA-like transporter family 11 144 1.1E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3800 f3c778aad3db1d7b11aee8d8ab61d157 297 TIGRFAM TIGR00688 rarD: protein RarD 10 263 1.3E-90 T 15-10-2018 IPR004626 RarD protein GO:0005887 VIBNI_A3800 f3c778aad3db1d7b11aee8d8ab61d157 297 SUPERFAMILY SSF103481 195 289 2.22E-7 T 15-10-2018 VIBNI_A3800 f3c778aad3db1d7b11aee8d8ab61d157 297 SUPERFAMILY SSF103481 47 145 1.2E-12 T 15-10-2018 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 Gene3D G3DSA:3.90.120.10 146 311 1.2E-114 T 15-10-2018 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 Gene3D G3DSA:3.40.50.150 7 318 1.2E-114 T 15-10-2018 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 3.9E-16 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 105 119 3.9E-16 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 151 164 3.9E-16 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 320 2.7E-81 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 321 2.2E-94 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 66 78 - T 15-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 VIBNI_A2976 83e185abcb968d0d683d1b50f33d0c53 336 SUPERFAMILY SSF53335 3 324 3.33E-92 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2052 a02224d7f2d32a00bdc1848e1401f792 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.618 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VIBNI_A2052 a02224d7f2d32a00bdc1848e1401f792 235 Gene3D G3DSA:3.40.50.150 11 234 3.6E-74 T 15-10-2018 VIBNI_A2052 a02224d7f2d32a00bdc1848e1401f792 235 SUPERFAMILY SSF53335 15 214 6.21E-45 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2052 a02224d7f2d32a00bdc1848e1401f792 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.8E-86 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VIBNI_A2052 a02224d7f2d32a00bdc1848e1401f792 235 Pfam PF13489 Methyltransferase domain 52 195 8.1E-25 T 15-10-2018 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 19 822 0.0 T 15-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 666 678 - T 15-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 Gene3D G3DSA:3.40.50.2000 485 807 8.1E-147 T 15-10-2018 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 SUPERFAMILY SSF53756 15 826 0.0 T 15-10-2018 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 Gene3D G3DSA:3.40.50.2000 14 484 6.8E-190 T 15-10-2018 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 PIRSF PIRSF000460 3 828 2.7E-211 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VIBNI_B1561 d695258b5801139a7e358881c742b1b7 828 Pfam PF00343 Carbohydrate phosphorylase 109 822 0.0 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 250 1.1E-44 T 15-10-2018 VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 SUPERFAMILY SSF51735 5 252 5.41E-60 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 Gene3D G3DSA:3.40.50.720 2 254 1.7E-61 T 15-10-2018 VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.4E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.4E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0451 cb2fc61221b4929be53d39e8f5fd657e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.7E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 SMART SM00487 17 281 0.0043 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 SUPERFAMILY SSF52540 42 603 3.59E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 SMART SM00491 477 606 2.9E-46 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 Gene3D G3DSA:3.40.50.300 443 634 2.1E-36 T 15-10-2018 VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 Gene3D G3DSA:3.40.50.300 19 286 4.2E-49 T 15-10-2018 VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 6.8E-5 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 SUPERFAMILY SSF52540 15 235 3.55E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2531 8aeec03ad3f835a2686b006e24aca04c 649 Pfam PF13307 Helicase C-terminal domain 462 619 3.3E-35 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 SUPERFAMILY SSF53850 87 292 3.71E-40 T 15-10-2018 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 5.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 5.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 5.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 5.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 Gene3D G3DSA:3.40.190.290 89 292 2.1E-43 T 15-10-2018 VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 Gene3D G3DSA:1.10.10.10 1 88 1.7E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 Pfam PF03466 LysR substrate binding domain 86 288 2.8E-40 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1384 a9f49c62ea277e17522007d151fcb3f8 293 SUPERFAMILY SSF46785 3 108 5.07E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0882 f382723b88e03997df25c9afde420084 315 Pfam PF01032 FecCD transport family 27 312 1.4E-51 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B0882 f382723b88e03997df25c9afde420084 315 SUPERFAMILY SSF81345 5 312 1.83E-57 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0882 f382723b88e03997df25c9afde420084 315 Gene3D G3DSA:1.10.3470.10 2 315 7.5E-55 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 463 5.2E-138 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 Gene3D G3DSA:2.40.50.100 69 104 1.4E-5 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 SUPERFAMILY SSF56954 171 261 5.49E-5 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.2E-49 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 Gene3D G3DSA:1.20.1600.10 165 263 3.4E-5 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 Gene3D G3DSA:1.10.287.470 105 123 1.4E-5 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 Gene3D G3DSA:2.40.30.170 328 446 1.1E-9 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 SUPERFAMILY SSF111369 79 124 4.18E-5 T 15-10-2018 VIBNI_B0027 57bb4880ede5a71838de0559adf256f5 463 Pfam PF13437 HlyD family secretion protein 317 419 2.7E-16 T 15-10-2018 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 2.8E-101 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 3.6E-151 T 15-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.7E-102 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 Gene3D G3DSA:3.20.20.70 1 284 2.2E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 PIRSF PIRSF001359 1 284 4.6E-111 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0971 505b89eee0dca69725a34284bcf1e4de 284 SUPERFAMILY SSF51569 3 283 2.78E-102 T 15-10-2018 VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 1.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.1E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 SUPERFAMILY SSF46785 10 147 5.69E-35 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 Gene3D G3DSA:1.10.10.10 6 147 1.6E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 Pfam PF01047 MarR family 42 98 3.0E-17 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1597 f8774ab06551788d85397af4d85a745a 148 SMART SM00347 35 133 1.0E-23 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1259 ed6ac6a7b7ccc9d599496acc08179d16 361 Gene3D G3DSA:2.40.370.10 239 361 2.1E-31 T 15-10-2018 IPR023374 AttH-like domain superfamily VIBNI_B1259 ed6ac6a7b7ccc9d599496acc08179d16 361 Gene3D G3DSA:2.40.370.10 50 237 3.4E-64 T 15-10-2018 IPR023374 AttH-like domain superfamily VIBNI_B1259 ed6ac6a7b7ccc9d599496acc08179d16 361 Pfam PF17186 Lipocalin-like domain 240 361 9.0E-41 T 15-10-2018 VIBNI_B1259 ed6ac6a7b7ccc9d599496acc08179d16 361 Pfam PF07143 CrtC N-terminal lipocalin domain 62 234 1.0E-54 T 15-10-2018 IPR010791 AttH domain VIBNI_B1259 ed6ac6a7b7ccc9d599496acc08179d16 361 SUPERFAMILY SSF159245 39 361 1.57E-99 T 15-10-2018 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 Gene3D G3DSA:3.40.710.10 26 282 2.9E-91 T 15-10-2018 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 SMART SM00936 284 374 5.8E-37 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 Gene3D G3DSA:2.60.410.10 284 374 1.2E-29 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 SUPERFAMILY SSF56601 12 284 2.45E-86 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 6.3E-26 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 SUPERFAMILY SSF69189 284 376 2.55E-27 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 1.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VIBNI_A2717 dcdaca612e5e2c15233dcc95730058f8 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 264 5.4E-93 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 103 121 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 312 327 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 201 212 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 333 350 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 67 83 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 PRINTS PR00992 Alanine racemase signature 244 271 1.7E-31 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 SMART SM01005 279 407 8.8E-52 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 Gene3D G3DSA:3.20.20.10 50 267 2.2E-129 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 Pfam PF01168 Alanine racemase, N-terminal domain 48 271 1.5E-45 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 Hamap MF_01201 Alanine racemase. 41 407 25.675 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 SUPERFAMILY SSF50621 275 407 1.67E-40 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 SUPERFAMILY SSF51419 48 281 1.31E-44 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 Pfam PF00842 Alanine racemase, C-terminal domain 280 406 3.0E-33 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 TIGRFAM TIGR00492 alr: alanine racemase 44 407 5.8E-68 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 Gene3D G3DSA:2.40.37.10 44 403 2.2E-129 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A2139 63ac134dbcb18121af5316384e70867b 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 72 82 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 9.2E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 1.2E-66 T 15-10-2018 VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 Gene3D G3DSA:3.40.50.720 1 253 6.3E-82 T 15-10-2018 VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.2E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.2E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0468 58e883b7391a208bdc133165fd25ab13 253 SUPERFAMILY SSF51735 13 252 1.49E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3686 0b3358d13b39a4349f054f378497b342 427 Gene3D G3DSA:3.40.50.11720 34 210 7.1E-47 T 15-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VIBNI_A3686 0b3358d13b39a4349f054f378497b342 427 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 1.9E-60 T 15-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VIBNI_A3686 0b3358d13b39a4349f054f378497b342 427 SUPERFAMILY SSF53756 59 407 5.34E-14 T 15-10-2018 VIBNI_A3686 0b3358d13b39a4349f054f378497b342 427 Gene3D G3DSA:3.40.50.2000 216 404 8.7E-60 T 15-10-2018 VIBNI_B0393 57e518528916fc5819dcb5f8ecb981d9 112 PIRSF PIRSF028299 1 112 3.1E-28 T 15-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VIBNI_B0393 57e518528916fc5819dcb5f8ecb981d9 112 Pfam PF11777 Protein of unknown function (DUF3316) 2 107 2.7E-20 T 15-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 Pfam PF09339 IclR helix-turn-helix domain 13 64 1.2E-9 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 Gene3D G3DSA:1.10.10.10 4 78 2.0E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 SUPERFAMILY SSF46785 13 82 2.41E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 Gene3D G3DSA:3.30.450.40 84 250 2.7E-30 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 Pfam PF01614 Bacterial transcriptional regulator 132 249 9.0E-12 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 SMART SM00346 11 101 2.9E-17 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A1210 262473aa7d13762873265f4b38014bdb 258 SUPERFAMILY SSF55781 76 253 9.16E-31 T 15-10-2018 VIBNI_A1715 7b74e12bcb9d217ec0c647cb661a3c5b 64 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 64 1.8E-25 T 15-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VIBNI_A1715 7b74e12bcb9d217ec0c647cb661a3c5b 64 PIRSF PIRSF036704 1 64 1.5E-23 T 15-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VIBNI_B0479 ab17dad2d692d729df6a1da67d948085 251 SUPERFAMILY SSF53850 27 245 1.47E-35 T 15-10-2018 VIBNI_B0479 ab17dad2d692d729df6a1da67d948085 251 SMART SM00062 26 250 0.0014 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B0479 ab17dad2d692d729df6a1da67d948085 251 Gene3D G3DSA:3.40.190.10 42 241 2.7E-25 T 15-10-2018 VIBNI_B0479 ab17dad2d692d729df6a1da67d948085 251 Gene3D G3DSA:3.40.190.10 107 206 2.7E-25 T 15-10-2018 VIBNI_B0479 ab17dad2d692d729df6a1da67d948085 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 245 6.0E-20 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 SUPERFAMILY SSF53187 3 377 5.43E-56 T 15-10-2018 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.985 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.4E-33 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.7E-25 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 Gene3D G3DSA:3.40.630.10 28 360 1.8E-81 T 15-10-2018 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 SUPERFAMILY SSF55031 177 292 5.38E-23 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 3.7E-126 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_A3595 168a6e8f2e577ea0b3935b4772b7824d 378 Gene3D G3DSA:3.30.70.360 177 292 1.8E-81 T 15-10-2018 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 Gene3D G3DSA:1.10.10.10 114 199 2.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 Gene3D G3DSA:3.40.50.2300 1 113 1.8E-21 T 15-10-2018 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 SUPERFAMILY SSF52172 1 122 1.04E-23 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 SMART SM00421 137 194 1.4E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 SMART SM00448 1 111 6.9E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 9.5E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 Pfam PF00072 Response regulator receiver domain 3 111 7.3E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.6E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.6E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.6E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1741 7a83a9e431b12039e4186d85a8c37314 204 SUPERFAMILY SSF46894 135 197 3.4E-17 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 8.8E-22 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Gene3D G3DSA:3.40.228.10 195 394 1.0E-132 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 44 2.7E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 SUPERFAMILY SSF50692 752 951 1.55E-39 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 SUPERFAMILY SSF53706 59 646 8.38E-201 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 SMART SM00926 61 115 9.3E-16 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 PIRSF PIRSF036643 787 951 2.8E-16 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 PIRSF PIRSF036643 639 678 200.0 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 PIRSF PIRSF036643 9 585 1.9E-113 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Gene3D G3DSA:2.40.40.20 767 951 6.7E-48 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Gene3D G3DSA:3.40.50.740 126 617 1.0E-132 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Gene3D G3DSA:2.20.25.90 63 114 3.2E-12 T 15-10-2018 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 3.0E-55 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1716 c62be8c4381c0e98b166e4fa824adda2 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 64 112 3.4E-11 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_B1546 7179408819823a5340f642a510b257e7 171 PIRSF PIRSF011443 4 171 3.1E-44 T 15-10-2018 IPR026267 Inner membrane protein YgjV VIBNI_B1546 7179408819823a5340f642a510b257e7 171 Pfam PF10688 Bacterial inner membrane protein 8 164 2.6E-48 T 15-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VIBNI_B1585 b70ca7ef493d32d9d75a71c66c211635 242 Pfam PF06764 Protein of unknown function (DUF1223) 41 223 5.3E-47 T 15-10-2018 IPR010634 Protein of unknown function DUF1223 VIBNI_B1585 b70ca7ef493d32d9d75a71c66c211635 242 SUPERFAMILY SSF52833 35 238 2.17E-55 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 PIRSF PIRSF000167 3 454 4.5E-172 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 Pfam PF04055 Radical SAM superfamily 57 227 2.9E-22 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 SUPERFAMILY SSF102114 6 444 7.46E-146 T 15-10-2018 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 SMART SM00729 52 272 6.8E-56 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 4.5E-208 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 Gene3D G3DSA:1.10.10.920 364 457 6.2E-34 T 15-10-2018 VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 Pfam PF06969 HemN C-terminal domain 363 431 7.6E-11 T 15-10-2018 IPR010723 HemN, C-terminal VIBNI_A3398 edce1de5d69956412ad3741464391f43 457 Gene3D G3DSA:3.80.30.20 1 363 6.7E-137 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 PIRSF PIRSF000447 1 414 2.8E-200 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 SMART SM00825 Beta-ketoacyl synthase 6 414 3.2E-15 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 Gene3D G3DSA:3.40.47.10 1 255 2.7E-92 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.9E-65 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.2E-36 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 SUPERFAMILY SSF53901 4 252 2.63E-80 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 Gene3D G3DSA:3.40.47.10 257 403 3.9E-50 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.8E-191 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VIBNI_A2359 243c8da0b4b37381d0020e4eb48c3727 414 SUPERFAMILY SSF53901 215 413 3.53E-68 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Pfam PF00072 Response regulator receiver domain 687 797 2.4E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SUPERFAMILY SSF158472 330 379 7.59E-9 T 15-10-2018 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Gene3D G3DSA:3.40.50.12740 684 859 2.0E-34 T 15-10-2018 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SMART SM00304 330 382 1.1E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Gene3D G3DSA:1.10.287.130 389 499 2.9E-29 T 15-10-2018 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SUPERFAMILY SSF47384 422 502 1.12E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SMART SM00387 548 662 1.2E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SMART SM00388 436 501 2.4E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Gene3D G3DSA:1.20.1480.50 290 388 1.2E-15 T 15-10-2018 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SUPERFAMILY SSF52172 683 805 4.13E-29 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SMART SM00448 685 797 3.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 549 659 2.7E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Pfam PF00512 His Kinase A (phospho-acceptor) domain 436 501 8.1E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 616 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 640 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 602 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 659 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 SUPERFAMILY SSF55874 490 660 6.29E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1036 3d8e4e1445d7f07b6c69cffb6dfdfac4 892 Gene3D G3DSA:3.30.565.10 500 665 2.0E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 Gene3D G3DSA:3.40.50.300 1 253 2.0E-47 T 15-10-2018 VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 SUPERFAMILY SSF52540 280 494 2.8E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 SMART SM00382 30 226 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 SMART SM00382 289 486 4.7E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 SUPERFAMILY SSF52540 4 240 2.06E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 Pfam PF00005 ABC transporter 280 437 2.4E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 Pfam PF00005 ABC transporter 22 180 5.3E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0444 d2085d71b360b44a9310d21b053c0ef9 509 Gene3D G3DSA:3.40.50.300 264 506 6.3E-41 T 15-10-2018 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Gene3D G3DSA:2.40.50.100 1 79 1.5E-20 T 15-10-2018 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Gene3D G3DSA:3.30.559.10 170 402 1.0E-98 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 SUPERFAMILY SSF52777 173 401 1.38E-90 T 15-10-2018 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Gene3D G3DSA:4.10.320.10 102 152 6.9E-23 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 SUPERFAMILY SSF47005 107 149 6.28E-12 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 8.4E-83 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.2E-17 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 1.8E-187 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 Pfam PF02817 e3 binding domain 113 145 3.1E-13 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A2562 5af81ffa7c48421237d72825690003d6 402 SUPERFAMILY SSF51230 1 93 5.5E-23 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_B0958 ac45fbbae9289efa0afa95095331b294 346 SUPERFAMILY SSF53850 28 336 1.81E-67 T 15-10-2018 VIBNI_B0958 ac45fbbae9289efa0afa95095331b294 346 Gene3D G3DSA:3.40.190.10 114 284 6.3E-55 T 15-10-2018 VIBNI_B0958 ac45fbbae9289efa0afa95095331b294 346 Gene3D G3DSA:3.40.190.10 30 318 6.3E-55 T 15-10-2018 VIBNI_B0958 ac45fbbae9289efa0afa95095331b294 346 Pfam PF12849 PBP superfamily domain 20 309 1.4E-42 T 15-10-2018 IPR024370 PBP domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF143517 994 1147 5.49E-43 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SMART SM01058 479 576 2.3E-51 T 15-10-2018 IPR003711 CarD-like/TRCF domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1112 28.035 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.40.50.11140 356 453 2.4E-35 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SMART SM00490 826 910 3.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF52540 782 990 9.1E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:2.30.30.840 483 541 2.6E-237 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Pfam PF02559 CarD-like/TRCF domain 480 575 2.2E-25 T 15-10-2018 IPR003711 CarD-like/TRCF domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Pfam PF00270 DEAD/DEAH box helicase 605 765 6.5E-21 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Pfam PF03461 TRCF domain 1009 1101 6.7E-28 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Pfam PF00271 Helicase conserved C-terminal domain 808 909 4.2E-16 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.40.50.11180 26 334 2.3E-121 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SMART SM00487 600 790 1.7E-34 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SMART SM00982 1008 1108 6.8E-47 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.30.2060.10 130 215 2.3E-121 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF52540 353 466 1.22E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.40.50.300 542 781 2.6E-237 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.40.50.300 478 990 2.6E-237 T 15-10-2018 VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 Gene3D G3DSA:3.90.1150.50 1004 1151 1.1E-44 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF141259 470 548 1.83E-24 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF52540 14 342 1.33E-102 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 SUPERFAMILY SSF52540 523 783 2.67E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1071 20878a85e9af06ee804ab25711714f38 1152 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1082 0.0 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 Pfam PF03477 ATP cone domain 1 86 1.6E-12 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 536 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 410 421 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 485 507 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 578 605 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 280 299 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 PRINTS PR01183 Ribonucleotide reductase large chain signature 447 470 1.3E-59 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 SUPERFAMILY SSF48168 6 201 2.22E-55 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 567 589 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 Pfam PF02867 Ribonucleotide reductase, barrel domain 203 724 4.7E-181 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 SUPERFAMILY SSF51998 202 737 4.27E-184 T 15-10-2018 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 128 198 2.1E-23 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 Gene3D G3DSA:3.20.70.20 71 735 2.0E-275 T 15-10-2018 VIBNI_B0190 58cfcb640951120d45a314516db05800 751 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 132 728 9.5E-209 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 Gene3D G3DSA:3.40.50.300 320 505 2.0E-16 T 15-10-2018 VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 SUPERFAMILY SSF52540 335 500 5.97E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 SUPERFAMILY SSF90123 13 297 4.32E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 Gene3D G3DSA:1.20.1560.10 6 302 2.0E-24 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 Pfam PF00005 ABC transporter 355 471 1.9E-5 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2903 e9efc5f0c10eaaf572aa16b89dde41d4 505 Pfam PF00664 ABC transporter transmembrane region 16 274 1.9E-14 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 131 593 4.2E-125 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Pfam PF13721 SecD export protein N-terminal TM region 14 109 1.2E-20 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 346 586 1.4E-68 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Pfam PF02355 Protein export membrane protein 425 594 1.5E-17 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Gene3D G3DSA:3.30.1360.200 285 423 2.9E-43 T 15-10-2018 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 SUPERFAMILY SSF82866 402 597 1.16E-38 T 15-10-2018 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 607 42.434 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Gene3D G3DSA:3.30.70.3400 229 429 2.9E-43 T 15-10-2018 VIBNI_B1845 d336ed231c2d51c9ec8ba0957c13e948 607 Pfam PF07549 SecD/SecF GG Motif 124 148 1.3E-4 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 Gene3D G3DSA:3.30.70.920 59 143 1.8E-24 T 15-10-2018 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.7E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.7E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.7E-12 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 SUPERFAMILY SSF54909 68 155 1.57E-21 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 6.8E-17 T 15-10-2018 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 Gene3D G3DSA:1.10.10.10 7 58 5.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 SMART SM00344 6 115 1.7E-46 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.2E-22 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_A0936 7192df4eb0cc8b77d0bf6697403a0ff0 155 SUPERFAMILY SSF46785 4 95 1.01E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 Gene3D G3DSA:3.30.420.380 7 254 6.6E-80 T 15-10-2018 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 Gene3D G3DSA:3.30.1360.100 334 420 2.4E-26 T 15-10-2018 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 Gene3D G3DSA:3.30.420.370 146 232 6.6E-80 T 15-10-2018 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 SUPERFAMILY SSF53067 151 255 1.09E-15 T 15-10-2018 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 419 1.3E-80 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 PIRSF PIRSF015761 230 417 5.0E-17 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 PIRSF PIRSF015761 5 218 8.9E-13 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 SUPERFAMILY SSF53067 6 148 1.81E-36 T 15-10-2018 VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 Pfam PF12693 GspL periplasmic domain 262 420 6.1E-45 T 15-10-2018 IPR025691 GspL periplasmic domain VIBNI_A3371 114aa5b937cb4ddf171cf145a26b0029 421 Pfam PF05134 Type II secretion system (T2SS), protein L 9 256 1.2E-61 T 15-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VIBNI_A0807 16fe093a176c0e4389ce2b22b7c6f760 177 Gene3D G3DSA:3.30.70.1070 95 170 3.5E-9 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A0807 16fe093a176c0e4389ce2b22b7c6f760 177 SUPERFAMILY SSF110997 100 173 1.83E-14 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A0807 16fe093a176c0e4389ce2b22b7c6f760 177 Pfam PF05036 Sporulation related domain 100 168 3.6E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_B1692 adb62f1735e8e6cb9ea18ebde2b390a7 193 SUPERFAMILY SSF52218 1 193 6.37E-43 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B1692 adb62f1735e8e6cb9ea18ebde2b390a7 193 Gene3D G3DSA:3.40.50.360 1 193 1.7E-41 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B1692 adb62f1735e8e6cb9ea18ebde2b390a7 193 Pfam PF02525 Flavodoxin-like fold 1 165 2.0E-33 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Pfam PF14492 Elongation Factor G, domain II 401 475 1.2E-28 T 15-10-2018 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Gene3D G3DSA:3.40.50.300 1 289 8.1E-103 T 15-10-2018 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.0E-28 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Gene3D G3DSA:2.40.30.10 290 402 8.4E-37 T 15-10-2018 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 1.3E-24 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Gene3D G3DSA:3.30.70.240 601 671 1.1E-83 T 15-10-2018 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SMART SM00838 597 684 1.4E-45 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SUPERFAMILY SSF52540 3 277 1.0E-99 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Gene3D G3DSA:3.30.70.870 403 480 7.7E-26 T 15-10-2018 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SMART SM00889 477 595 1.8E-62 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SUPERFAMILY SSF54980 401 478 5.4E-21 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Gene3D G3DSA:3.30.230.10 481 684 1.1E-83 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 2.0E-292 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SUPERFAMILY SSF54211 476 595 8.85E-40 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 1.9E-60 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SUPERFAMILY SSF50447 261 399 9.94E-32 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.1E-44 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.967 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A0506 740183ff3bdd49a2c1e7ab222c4452a6 695 SUPERFAMILY SSF54980 600 688 9.35E-29 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A2960 757cdd6b579a5071bc4e6798915ba41d 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 151 9.7E-54 T 15-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VIBNI_A2960 757cdd6b579a5071bc4e6798915ba41d 163 Pfam PF02470 MlaD protein 40 118 1.5E-19 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 Gene3D G3DSA:3.50.50.60 150 271 6.5E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 Gene3D G3DSA:3.50.50.60 9 332 6.5E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 SUPERFAMILY SSF51905 3 338 1.1E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 6.7E-35 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 SUPERFAMILY SSF55424 346 466 1.39E-38 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.4E-67 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.2E-40 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.2E-40 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.2E-40 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.2E-40 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.2E-40 T 15-10-2018 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.9E-63 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 PIRSF PIRSF000350 1 468 3.7E-82 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 1.3E-148 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VIBNI_A0183 27123c617ac8b94fc2f766d6ee5ba3c1 476 Gene3D G3DSA:3.30.390.30 346 467 1.5E-44 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 Pfam PF01799 [2Fe-2S] binding domain 81 154 2.5E-32 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 SUPERFAMILY SSF54292 3 85 2.56E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 466 9.8E-200 T 15-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 PIRSF PIRSF036557 1 481 4.9E-191 T 15-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 SUPERFAMILY SSF56176 191 359 7.36E-51 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 192 358 4.3E-49 T 15-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 SUPERFAMILY SSF55447 364 472 2.75E-33 T 15-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 SMART SM01092 366 467 2.9E-29 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 366 466 5.4E-31 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 Gene3D G3DSA:3.30.365.10 1 481 4.9E-149 T 15-10-2018 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 71 1.7E-5 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_B1481 580ad1dd5ac7dbcbfefded9bf08e952a 482 SUPERFAMILY SSF47741 93 179 5.23E-35 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily VIBNI_A0987 8b4b034943b5bdfaab3d0a86510afb3e 68 Gene3D G3DSA:3.30.429.10 2 62 3.0E-17 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A0987 8b4b034943b5bdfaab3d0a86510afb3e 68 SUPERFAMILY SSF55331 9 61 4.09E-11 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A0987 8b4b034943b5bdfaab3d0a86510afb3e 68 Pfam PF01361 Tautomerase enzyme 9 59 2.8E-12 T 15-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 SMART SM01130 1 287 7.6E-76 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 3.7E-12 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 3.7E-12 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 3.7E-12 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 3.7E-12 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 SUPERFAMILY SSF51569 2 287 2.41E-82 T 15-10-2018 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 PIRSF PIRSF001365 1 288 4.7E-72 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 Gene3D G3DSA:3.20.20.70 1 287 1.3E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2737 d7bc72090b3e792d16c8f2ee29ec2fc2 289 Pfam PF00701 Dihydrodipicolinate synthetase family 2 284 2.6E-75 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 Gene3D G3DSA:3.40.50.20 1 114 1.5E-38 T 15-10-2018 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 9.2E-88 T 15-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 Gene3D G3DSA:3.30.1490.20 115 181 2.8E-26 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.912 T 15-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 SUPERFAMILY SSF56059 98 288 1.04E-50 T 15-10-2018 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 Gene3D G3DSA:3.30.470.80 182 299 2.0E-44 T 15-10-2018 VIBNI_A1301 20a4e8447f30ab3ba4d29c1b97e5247a 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.8E-69 T 15-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 Gene3D G3DSA:2.30.42.10 257 352 1.3E-20 T 15-10-2018 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 Gene3D G3DSA:2.40.10.10 29 142 5.5E-31 T 15-10-2018 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 Gene3D G3DSA:2.40.10.10 143 256 2.0E-36 T 15-10-2018 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 7.8E-46 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 352 4.8E-155 T 15-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 Pfam PF13365 Trypsin-like peptidase domain 82 216 6.5E-32 T 15-10-2018 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 Pfam PF13180 PDZ domain 257 347 2.1E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 SUPERFAMILY SSF50156 240 346 1.71E-18 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 SUPERFAMILY SSF50494 43 266 3.46E-60 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_A0203 710c803bbec3484aa0f6971a317b3459 354 SMART SM00228 272 339 6.8E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_B0434 4ddb504502becc47c97c63f5c9dd870d 327 Pfam PF05035 2-keto-3-deoxy-galactonokinase 7 298 7.3E-43 T 15-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 VIBNI_B0434 4ddb504502becc47c97c63f5c9dd870d 327 Gene3D G3DSA:3.30.420.310 86 294 1.6E-40 T 15-10-2018 VIBNI_B0434 4ddb504502becc47c97c63f5c9dd870d 327 Gene3D G3DSA:3.30.420.300 5 117 1.6E-40 T 15-10-2018 VIBNI_B0434 4ddb504502becc47c97c63f5c9dd870d 327 SUPERFAMILY SSF53067 1 283 1.73E-8 T 15-10-2018 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Gene3D G3DSA:3.30.70.270 487 659 1.1E-55 T 15-10-2018 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00091 375 443 13.0 T 15-10-2018 IPR000014 PAS domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00091 112 178 0.21 T 15-10-2018 IPR000014 PAS domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 370 4.4E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 234 1.3E-13 T 15-10-2018 IPR000014 PAS domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 387 490 7.8E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SUPERFAMILY SSF55785 249 364 4.54E-9 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Pfam PF08447 PAS fold 135 225 1.1E-18 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Pfam PF08447 PAS fold 398 467 9.1E-9 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Pfam PF08447 PAS fold 269 343 2.0E-7 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 497 654 2.5E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SUPERFAMILY SSF55785 360 484 1.34E-12 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 494 658 2.2E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Gene3D G3DSA:3.30.450.20 121 234 5.6E-25 T 15-10-2018 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Gene3D G3DSA:3.30.450.20 255 366 2.8E-10 T 15-10-2018 VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SUPERFAMILY SSF55073 502 657 3.69E-46 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SUPERFAMILY SSF55785 117 232 1.27E-19 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00086 188 231 2.2E-4 T 15-10-2018 IPR001610 PAC motif VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00086 321 363 0.085 T 15-10-2018 IPR001610 PAC motif VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00086 448 486 70.0 T 15-10-2018 IPR001610 PAC motif VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 SMART SM00267 486 658 1.8E-61 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1591 5526effa35d4ac1d14db3bee8c5965ce 662 Gene3D G3DSA:3.30.450.20 369 482 6.3E-17 T 15-10-2018 VIBNI_B0144 c4ea6a6268a251d0d50aef35940ef12e 319 Pfam PF00795 Carbon-nitrogen hydrolase 5 279 2.6E-44 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VIBNI_B0144 c4ea6a6268a251d0d50aef35940ef12e 319 Gene3D G3DSA:3.60.110.10 3 300 4.7E-61 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_B0144 c4ea6a6268a251d0d50aef35940ef12e 319 SUPERFAMILY SSF56317 1 281 3.66E-56 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_B0032 b7db3319deb2544939edb1bd5498b968 294 Gene3D G3DSA:3.40.50.300 5 245 3.8E-56 T 15-10-2018 VIBNI_B0032 b7db3319deb2544939edb1bd5498b968 294 Pfam PF00005 ABC transporter 25 171 5.0E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0032 b7db3319deb2544939edb1bd5498b968 294 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0032 b7db3319deb2544939edb1bd5498b968 294 SMART SM00382 33 219 1.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0032 b7db3319deb2544939edb1bd5498b968 294 SUPERFAMILY SSF52540 5 223 2.61E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 Gene3D G3DSA:3.30.450.20 37 193 2.5E-48 T 15-10-2018 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 Gene3D G3DSA:1.10.287.950 214 545 7.9E-73 T 15-10-2018 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 Pfam PF17200 Single Cache domain 2 43 190 1.2E-35 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 SMART SM01049 38 128 7.5E-24 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 SMART SM00283 283 544 3.1E-68 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 511 1.3E-43 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 1.9E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 1.9E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 1.9E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 SMART SM00304 215 268 4.9E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 SUPERFAMILY SSF58104 236 545 4.71E-73 T 15-10-2018 VIBNI_B1082 0ed98f6589ec4a9a5503b661016d4707 545 Pfam PF00672 HAMP domain 216 263 8.6E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0584 747c51171fb0902053d7cdc5dcd5a9c4 131 SUPERFAMILY SSF54593 5 127 5.09E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0584 747c51171fb0902053d7cdc5dcd5a9c4 131 Gene3D G3DSA:3.10.180.10 4 129 8.8E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0584 747c51171fb0902053d7cdc5dcd5a9c4 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 3.6E-12 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 SUPERFAMILY SSF48008 82 217 1.05E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 Gene3D G3DSA:1.10.10.10 2 74 2.1E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 Pfam PF07729 FCD domain 84 209 7.6E-27 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 SMART SM00895 84 211 2.1E-24 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 SMART SM00345 16 74 1.9E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 SUPERFAMILY SSF46785 9 101 1.59E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 6.1E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 Gene3D G3DSA:1.20.120.530 77 219 4.4E-29 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1833 c7f0342b2449bd2adeb7525dff9732f3 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 Gene3D G3DSA:3.40.5.10 1 50 2.0E-23 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.6E-25 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.76 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.9E-54 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 SUPERFAMILY SSF55653 60 148 3.4E-25 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.5E-21 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 SUPERFAMILY SSF55658 1 57 4.71E-19 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VIBNI_A3549 893db5a98befeba9c2e2a29d5e9186b6 150 Gene3D G3DSA:3.10.430.100 61 149 1.1E-30 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 Gene3D G3DSA:1.25.40.10 175 345 6.2E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 Gene3D G3DSA:1.25.40.10 38 174 1.3E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 SMART SM00028 180 213 1.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 SMART SM00028 69 102 81.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 SMART SM00028 214 247 2.2 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 SUPERFAMILY SSF81901 39 246 1.33E-16 T 15-10-2018 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.019 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2331 2e238fa30c9fd10917ba30cbb9223624 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.732 T 15-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VIBNI_A3810 df80cf8dff68e550c1dd53a46af25e9a 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VIBNI_A3810 df80cf8dff68e550c1dd53a46af25e9a 398 Pfam PF07690 Major Facilitator Superfamily 18 354 6.1E-49 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A3810 df80cf8dff68e550c1dd53a46af25e9a 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 384 1.2E-67 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VIBNI_A3810 df80cf8dff68e550c1dd53a46af25e9a 398 Gene3D G3DSA:1.20.1720.10 14 387 6.5E-89 T 15-10-2018 VIBNI_A3810 df80cf8dff68e550c1dd53a46af25e9a 398 SUPERFAMILY SSF103473 8 395 3.92E-60 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 8.2E-106 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 PIRSF PIRSF002155 1 227 7.5E-79 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 Gene3D G3DSA:3.40.50.790 68 159 7.0E-80 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 8.8E-52 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 Gene3D G3DSA:3.30.190.20 21 225 7.0E-80 T 15-10-2018 VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.912 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VIBNI_A3330 54ee7aa71b4974a09d6d12bcacd934fe 234 SUPERFAMILY SSF56808 6 225 1.09E-81 T 15-10-2018 IPR023674 Ribosomal protein L1-like VIBNI_B0947 4fb4bb65c9e6b754f462470929a2ee55 560 Gene3D G3DSA:3.30.2350.10 348 560 2.4E-64 T 15-10-2018 VIBNI_B0947 4fb4bb65c9e6b754f462470929a2ee55 560 Pfam PF00849 RNA pseudouridylate synthase 366 513 3.5E-31 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B0947 4fb4bb65c9e6b754f462470929a2ee55 560 SUPERFAMILY SSF55120 353 557 9.92E-61 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B0947 4fb4bb65c9e6b754f462470929a2ee55 560 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 404 418 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B0041 7dbd2a3cf45a8d72b0b6bf90d57d7885 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 1.8E-211 T 15-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VIBNI_B0041 7dbd2a3cf45a8d72b0b6bf90d57d7885 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 436 8.0E-94 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VIBNI_B0041 7dbd2a3cf45a8d72b0b6bf90d57d7885 496 Pfam PF00474 Sodium:solute symporter family 36 436 9.1E-103 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VIBNI_B0041 7dbd2a3cf45a8d72b0b6bf90d57d7885 496 Gene3D G3DSA:1.20.1730.10 13 495 5.1E-97 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Gene3D G3DSA:3.30.460.10 16 175 1.6E-62 T 15-10-2018 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 6 447 38.131 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 SUPERFAMILY SSF81891 177 389 2.49E-50 T 15-10-2018 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 447 4.4E-163 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 206 267 2.5E-21 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 SUPERFAMILY SSF81301 22 175 1.63E-39 T 15-10-2018 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Gene3D G3DSA:1.10.3090.10 177 427 3.0E-95 T 15-10-2018 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Pfam PF01743 Poly A polymerase head domain 50 179 1.5E-37 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VIBNI_A2849 872ac7e812e019df2c4befd8f82a29af 448 Pfam PF12626 Polymerase A arginine-rich C-terminus 325 440 7.5E-38 T 15-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 Gene3D G3DSA:1.10.150.170 112 218 7.5E-102 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 SUPERFAMILY SSF81799 113 216 2.09E-31 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 SUPERFAMILY SSF53335 7 316 1.19E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 Pfam PF01795 MraW methylase family 5 316 4.6E-112 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 PIRSF PIRSF004486 1 316 1.4E-101 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 Gene3D G3DSA:3.40.50.150 10 315 7.5E-102 T 15-10-2018 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.069 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VIBNI_A0221 23e5b7df3b116268536c15459bbb7732 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.9E-120 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VIBNI_A1702 602252c7863c189d85b6658bc5c82d2c 120 SUPERFAMILY SSF54593 1 119 9.76E-18 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1702 602252c7863c189d85b6658bc5c82d2c 120 Gene3D G3DSA:3.10.180.10 1 119 1.3E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1702 602252c7863c189d85b6658bc5c82d2c 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 116 3.1E-6 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0436 582a42478837d3e5b41eda66276618fa 216 Pfam PF01081 KDPG and KHG aldolase 10 204 3.5E-34 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B0436 582a42478837d3e5b41eda66276618fa 216 Gene3D G3DSA:3.20.20.70 1 216 8.0E-66 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0436 582a42478837d3e5b41eda66276618fa 216 SUPERFAMILY SSF51569 4 211 2.75E-51 T 15-10-2018 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Gene3D G3DSA:1.20.58.1490 1 94 1.3E-33 T 15-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 PIRSF PIRSF000006 1 323 4.2E-105 T 15-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Gene3D G3DSA:1.10.760.10 210 296 6.0E-73 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 SUPERFAMILY SSF46626 239 320 1.75E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 322 1.2E-58 T 15-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 PRINTS PR00605 Class IC cytochrome C signature 250 261 9.1E-6 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 PRINTS PR00605 Class IC cytochrome C signature 294 316 9.1E-6 T 15-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 6.4E-23 T 15-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Gene3D G3DSA:1.10.760.10 143 319 6.0E-73 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 SUPERFAMILY SSF46626 55 238 2.58E-29 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 155 228 2.7E-14 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1743 74388b1dfe1938ddf9c6bedcd9a40ae6 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 316 4.7E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 Gene3D G3DSA:3.30.420.150 114 291 7.4E-84 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 PIRSF PIRSF001267 1 496 9.5E-179 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 9.6E-89 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 SUPERFAMILY SSF53067 135 305 1.3E-42 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 SUPERFAMILY SSF109604 309 494 1.26E-39 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 Gene3D G3DSA:3.30.420.40 11 299 7.4E-84 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 SUPERFAMILY SSF53067 9 129 4.97E-37 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 Gene3D G3DSA:1.10.3210.10 306 497 2.1E-45 T 15-10-2018 VIBNI_A3788 369dcf81eb1a5ec2f84abc0f39b6a27d 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.576 T 15-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.4E-34 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 SMART SM00411 1 90 4.2E-45 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 SUPERFAMILY SSF47729 1 90 1.34E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A2425 59b089c251fad44f886d24a854af6919 90 Gene3D G3DSA:4.10.520.10 1 90 4.8E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A2646 e2dc8b3d7e7ac85670981ae8eeb59193 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 97 3.6E-23 T 15-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VIBNI_A2646 e2dc8b3d7e7ac85670981ae8eeb59193 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 4.9E-19 T 15-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VIBNI_A2646 e2dc8b3d7e7ac85670981ae8eeb59193 103 SUPERFAMILY SSF101498 2 97 2.22E-19 T 15-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VIBNI_B0646 94537265b5ab4691fac270a310b6d5af 151 Gene3D G3DSA:3.40.630.30 5 151 6.5E-40 T 15-10-2018 VIBNI_B0646 94537265b5ab4691fac270a310b6d5af 151 Pfam PF00583 Acetyltransferase (GNAT) family 27 114 3.2E-9 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0646 94537265b5ab4691fac270a310b6d5af 151 SUPERFAMILY SSF55729 13 148 4.56E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 SUPERFAMILY SSF46785 1 56 4.06E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 Pfam PF01037 Lrp/AsnC ligand binding domain 75 138 3.9E-12 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 SMART SM00344 1 109 1.5E-20 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 SUPERFAMILY SSF54909 63 144 3.62E-12 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 Gene3D G3DSA:3.30.70.920 58 144 2.7E-13 T 15-10-2018 VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 6.5E-18 T 15-10-2018 VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 Gene3D G3DSA:1.10.10.10 1 52 1.7E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.4E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.4E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1492 282c3d52c877be4d85f70286afd0e8ac 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.4E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_A1750 8528ab022a9be200ea6cb280fae88aac 245 SUPERFAMILY SSF53955 84 186 6.91E-12 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A1750 8528ab022a9be200ea6cb280fae88aac 245 Gene3D G3DSA:1.10.530.10 53 193 5.3E-10 T 15-10-2018 VIBNI_A1750 8528ab022a9be200ea6cb280fae88aac 245 Pfam PF01464 Transglycosylase SLT domain 96 150 3.6E-5 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 SUPERFAMILY SSF51735 5 200 1.29E-25 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 Pfam PF00106 short chain dehydrogenase 7 190 7.4E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 Gene3D G3DSA:3.40.50.720 1 225 1.2E-23 T 15-10-2018 VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0889 60386875b3513fc5e5c31a86b46b4507 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2932 3487936356b08dc2d2f2c5883b5c0101 322 Gene3D G3DSA:3.40.190.10 117 255 7.9E-108 T 15-10-2018 VIBNI_A2932 3487936356b08dc2d2f2c5883b5c0101 322 Gene3D G3DSA:3.40.190.10 30 319 7.9E-108 T 15-10-2018 VIBNI_A2932 3487936356b08dc2d2f2c5883b5c0101 322 Pfam PF16868 NMT1-like family 30 319 1.2E-93 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_A2932 3487936356b08dc2d2f2c5883b5c0101 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 9 319 6.4E-110 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_A2932 3487936356b08dc2d2f2c5883b5c0101 322 SUPERFAMILY SSF53850 25 321 1.26E-85 T 15-10-2018 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 7.2E-30 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 16.953 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VIBNI_A0151 6bcd1bf81e71b859aa1ccfc19a6d2345 65 Gene3D G3DSA:3.30.70.1680 1 59 7.7E-30 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 Gene3D G3DSA:1.10.260.40 5 71 6.4E-21 T 15-10-2018 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 Gene3D G3DSA:3.40.50.2300 74 335 6.4E-71 T 15-10-2018 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 Gene3D G3DSA:3.40.50.2300 172 340 6.4E-71 T 15-10-2018 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 SUPERFAMILY SSF47413 13 70 4.64E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 SUPERFAMILY SSF53822 72 337 1.81E-64 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 15-10-2018 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 2.1E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 25 35 2.1E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 SMART SM00354 13 83 1.3E-24 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 Pfam PF13377 Periplasmic binding protein-like domain 180 343 2.4E-37 T 15-10-2018 VIBNI_A1927 ac5598785c7aefaedeccd7d200542137 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 59 1.5E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 SUPERFAMILY SSF53850 29 517 2.17E-147 T 15-10-2018 VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 429 1.1E-101 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 Gene3D G3DSA:3.10.105.10 275 495 9.6E-155 T 15-10-2018 VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 78 100 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 PIRSF PIRSF002741 20 515 2.5E-127 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 Gene3D G3DSA:3.40.190.10 197 507 9.6E-155 T 15-10-2018 VIBNI_B0568 21bdbc7534cc404ef08a5735cf2ba570 518 Gene3D G3DSA:3.90.76.10 41 196 9.6E-155 T 15-10-2018 VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 Gene3D G3DSA:1.10.60.30 28 102 3.8E-29 T 15-10-2018 VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.95 T 15-10-2018 IPR006839 Ribosome-associated, YjgA VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 PIRSF PIRSF016183 1 174 9.8E-74 T 15-10-2018 IPR006839 Ribosome-associated, YjgA VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 Gene3D G3DSA:1.10.60.30 103 174 7.2E-26 T 15-10-2018 VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 SUPERFAMILY SSF158710 28 170 4.45E-54 T 15-10-2018 IPR023153 PSPTO4464-like domain superfamily VIBNI_A2978 0a0c7b1d64fb56f6e2018fe404563004 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 4.4E-58 T 15-10-2018 IPR006839 Ribosome-associated, YjgA VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 2.7E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.7E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 2.7E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SUPERFAMILY SSF52172 622 747 2.42E-35 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SUPERFAMILY SSF55874 297 463 1.31E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Gene3D G3DSA:1.10.287.130 171 304 7.7E-17 T 15-10-2018 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 465 1.8E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Pfam PF00072 Response regulator receiver domain 484 598 1.2E-4 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Pfam PF00072 Response regulator receiver domain 626 739 2.3E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Gene3D G3DSA:3.30.565.10 307 469 1.6E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SUPERFAMILY SSF52172 480 605 1.39E-13 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SUPERFAMILY SSF47384 230 309 1.69E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SMART SM00448 482 598 1.2E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SMART SM00448 624 739 1.1E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Gene3D G3DSA:3.40.50.2300 610 745 6.0E-41 T 15-10-2018 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.6E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SMART SM00388 243 308 5.9E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 SMART SM00387 355 467 1.9E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1573 266f9b096dc6cf042bed01e8ba3a5341 767 Gene3D G3DSA:3.40.50.2300 482 605 1.1E-14 T 15-10-2018 VIBNI_A3362 3d341a372eaaf82a8c763f44f5e97c17 254 Pfam PF00561 alpha/beta hydrolase fold 16 241 1.9E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A3362 3d341a372eaaf82a8c763f44f5e97c17 254 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 44.882 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VIBNI_A3362 3d341a372eaaf82a8c763f44f5e97c17 254 Gene3D G3DSA:3.40.50.1820 1 253 5.1E-68 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3362 3d341a372eaaf82a8c763f44f5e97c17 254 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 3.5E-104 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VIBNI_A3362 3d341a372eaaf82a8c763f44f5e97c17 254 SUPERFAMILY SSF53474 4 253 1.41E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1672 c179c9ebd982971bb6830320df4738e3 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 188 8.0E-69 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VIBNI_A1672 c179c9ebd982971bb6830320df4738e3 194 Pfam PF12804 MobA-like NTP transferase domain 10 158 4.4E-32 T 15-10-2018 IPR025877 MobA-like NTP transferase VIBNI_A1672 c179c9ebd982971bb6830320df4738e3 194 SUPERFAMILY SSF53448 10 187 2.21E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1672 c179c9ebd982971bb6830320df4738e3 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.177 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VIBNI_A1672 c179c9ebd982971bb6830320df4738e3 194 Gene3D G3DSA:3.90.550.10 3 192 7.2E-55 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 177 3.0E-20 T 15-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 SMART SM01118 9 180 4.1E-14 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 138 9.0E-10 T 15-10-2018 VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 SUPERFAMILY SSF55154 10 178 3.92E-39 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 Gene3D G3DSA:2.40.320.10 1 184 1.1E-47 T 15-10-2018 VIBNI_B0142 c6abb190353a41abd537800ed5fef3f3 186 Pfam PF01928 CYTH domain 10 171 1.3E-18 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 83 372 1.1E-25 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 Gene3D G3DSA:3.40.366.10 68 375 7.6E-75 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 Gene3D G3DSA:3.30.70.250 196 266 7.6E-75 T 15-10-2018 VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 Pfam PF00698 Acyl transferase domain 131 358 1.9E-25 T 15-10-2018 IPR014043 Acyl transferase VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 SUPERFAMILY SSF55048 195 258 3.66E-7 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 Gene3D G3DSA:3.30.70.3290 39 408 7.6E-75 T 15-10-2018 VIBNI_A1012 833d7bf55d098f7643a1dd69de58affe 410 SUPERFAMILY SSF52151 69 359 5.75E-42 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.8E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 Gene3D G3DSA:3.40.190.10 92 278 6.4E-22 T 15-10-2018 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 Pfam PF03466 LysR substrate binding domain 87 287 3.9E-27 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 Gene3D G3DSA:1.10.10.10 1 91 3.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 SUPERFAMILY SSF46785 2 101 4.19E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 SUPERFAMILY SSF53850 87 287 5.84E-26 T 15-10-2018 VIBNI_B0101 ee5b0b1bc184904f6bc00b35d83cf189 288 Gene3D G3DSA:3.40.190.10 165 266 6.4E-22 T 15-10-2018 VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 373 464 1.2E-6 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 Pfam PF00563 EAL domain 535 759 6.1E-47 T 15-10-2018 IPR001633 EAL domain VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 SMART SM00052 527 764 3.1E-22 T 15-10-2018 IPR001633 EAL domain VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 SUPERFAMILY SSF141868 534 767 4.97E-46 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 Gene3D G3DSA:3.20.20.450 526 773 1.6E-53 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 Gene3D G3DSA:3.30.70.270 366 496 2.3E-8 T 15-10-2018 VIBNI_A1598 5fd65a66a4e8b123801770a56cb63313 776 SUPERFAMILY SSF55073 375 498 1.57E-6 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 Gene3D G3DSA:3.30.450.20 131 256 1.1E-20 T 15-10-2018 VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 SUPERFAMILY SSF141868 428 673 4.45E-69 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 SUPERFAMILY SSF54631 705 824 9.73E-9 T 15-10-2018 VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 Pfam PF13426 PAS domain 145 245 3.3E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 SUPERFAMILY SSF55785 131 244 3.81E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 Gene3D G3DSA:3.10.580.10 700 825 4.7E-7 T 15-10-2018 VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 SMART SM00091 134 200 5.8E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 SMART SM00052 422 669 1.2E-53 T 15-10-2018 IPR001633 EAL domain VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 246 2.3E-12 T 15-10-2018 IPR000014 PAS domain VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 Gene3D G3DSA:3.20.20.450 420 678 1.1E-70 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2228 4bb8271f4f4da06e7e83e3cfa84c7e87 825 Pfam PF00563 EAL domain 429 664 1.7E-60 T 15-10-2018 IPR001633 EAL domain VIBNI_B1035 11619d3b9d23fca49bc4ef3bf4c6f203 134 SUPERFAMILY SSF82784 1 132 4.58E-38 T 15-10-2018 IPR036102 OsmC/Ohr superfamily VIBNI_B1035 11619d3b9d23fca49bc4ef3bf4c6f203 134 Gene3D G3DSA:3.30.300.20 35 134 3.2E-24 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_B1035 11619d3b9d23fca49bc4ef3bf4c6f203 134 Pfam PF02566 OsmC-like protein 29 127 1.2E-14 T 15-10-2018 IPR003718 OsmC/Ohr family VIBNI_B1035 11619d3b9d23fca49bc4ef3bf4c6f203 134 Gene3D G3DSA:2.20.25.10 1 34 1.4E-16 T 15-10-2018 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 4.8E-159 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Pfam PF02811 PHP domain 8 97 9.7E-11 T 15-10-2018 IPR004013 PHP domain GO:0003824 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Pfam PF14579 Helix-hairpin-helix motif 768 853 1.6E-17 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Pfam PF01336 OB-fold nucleic acid binding domain 934 1006 1.7E-9 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 13.123 T 15-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Gene3D G3DSA:3.20.20.140 1 247 3.0E-41 T 15-10-2018 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 SMART SM00481 4 73 1.8E-9 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 SUPERFAMILY SSF50249 919 990 8.57E-5 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Gene3D G3DSA:1.10.150.870 747 843 4.9E-6 T 15-10-2018 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 269 694 6.1E-147 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2297 9d04198ab99f0090cb22750b77a47c18 1023 SUPERFAMILY SSF89550 8 83 4.12E-5 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 SUPERFAMILY SSF54197 181 348 2.21E-49 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 178 2.5E-67 T 15-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 349 7.1E-176 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 PIRSF PIRSF000808 2 345 8.9E-117 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 SUPERFAMILY SSF54197 5 179 3.4E-70 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 Gene3D G3DSA:3.30.428.10 47 177 3.2E-53 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 190 349 2.0E-62 T 15-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 Gene3D G3DSA:3.30.428.10 178 350 2.8E-68 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B1379 7ea5251242257722de71aec72344c62b 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 15-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 SUPERFAMILY SSF47757 16 88 3.66E-18 T 15-10-2018 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 24 74 1.4E-14 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PIRSF PIRSF000410 5 286 1.1E-97 T 15-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 226 240 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 245 268 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 45 58 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 120 140 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 82 94 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 1.2E-42 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 Gene3D G3DSA:1.10.155.10 14 87 4.4E-20 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 Gene3D G3DSA:3.40.50.150 88 286 1.3E-64 T 15-10-2018 VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 SUPERFAMILY SSF53335 89 285 6.76E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 89 283 5.1E-60 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VIBNI_B0012 4080a4e48069827fa3501740466a3da6 286 SMART SM00138 23 286 3.9E-87 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 Gene3D G3DSA:3.30.420.40 242 497 4.5E-53 T 15-10-2018 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 SUPERFAMILY SSF53067 254 487 4.92E-46 T 15-10-2018 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 SUPERFAMILY SSF53067 4 252 1.3E-57 T 15-10-2018 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 Gene3D G3DSA:3.30.420.40 1 240 5.0E-67 T 15-10-2018 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 3.5E-61 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 PIRSF PIRSF000538 2 495 8.8E-94 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B2109 1d93462cd2418e19247899a0cc7953c9 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 2.0E-22 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 ProSitePatterns PS01053 Arginase family signature. 259 280 - T 15-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 Gene3D G3DSA:3.40.800.10 2 340 1.3E-124 T 15-10-2018 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 TIGRFAM TIGR01227 hutG: formimidoylglutamase 8 331 3.5E-104 T 15-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 PRINTS PR00116 Arginase signature 118 133 5.7E-5 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 PRINTS PR00116 Arginase signature 256 285 5.7E-5 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 Pfam PF00491 Arginase family 39 329 3.7E-59 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 SUPERFAMILY SSF52768 8 334 6.48E-77 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 Hamap MF_00737 Formimidoylglutamase [hutG]. 3 331 41.715 T 15-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VIBNI_A1178 bf1d168490fdd0236129c3ac180535df 341 PIRSF PIRSF036979 17 337 2.5E-23 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 9.1E-140 T 15-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 Gene3D G3DSA:2.30.42.10 224 312 2.0E-18 T 15-10-2018 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 Gene3D G3DSA:2.30.42.10 126 221 3.4E-34 T 15-10-2018 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 SUPERFAMILY SSF50156 209 293 5.65E-16 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 SUPERFAMILY SSF50156 89 187 1.58E-12 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 SMART SM00228 115 186 7.6E-4 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 SMART SM00228 212 281 6.3E-7 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 Pfam PF02163 Peptidase family M50 11 440 1.7E-85 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VIBNI_A2497 b0302d5064249d4aac514c4bdc7f90e6 452 Pfam PF13180 PDZ domain 219 287 1.0E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 659 8.5E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SUPERFAMILY SSF158472 192 241 8.63E-11 T 15-10-2018 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Pfam PF00672 HAMP domain 193 239 2.2E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Gene3D G3DSA:1.20.1480.50 156 248 1.9E-15 T 15-10-2018 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SMART SM00304 191 243 1.3E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Gene3D G3DSA:1.10.287.130 387 495 2.0E-25 T 15-10-2018 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SMART SM00387 544 662 4.3E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Gene3D G3DSA:3.40.50.12740 687 863 6.2E-30 T 15-10-2018 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 639 8.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 659 8.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 600 8.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 614 8.6E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Gene3D G3DSA:3.30.565.10 496 663 1.3E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SUPERFAMILY SSF47384 422 499 5.3E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SUPERFAMILY SSF55874 486 659 5.63E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SMART SM00388 432 497 7.9E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Pfam PF00072 Response regulator receiver domain 690 798 2.6E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SUPERFAMILY SSF52172 686 811 2.7E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 432 497 8.4E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0319 e0cd8c9e895c2cdee16789d502fe108d 894 SMART SM00448 688 800 7.0E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Pfam PF10531 SLBB domain 296 345 2.0E-8 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.4E-33 T 15-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Pfam PF12838 4Fe-4S dicluster domain 378 430 8.0E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 7.5E-48 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 1.4E-192 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 SUPERFAMILY SSF142019 95 302 1.19E-60 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 750 247.02 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Gene3D G3DSA:3.40.50.11540 145 288 4.3E-12 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 SUPERFAMILY SSF46548 336 446 1.55E-19 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A0907 4119c53e6956810d79bdae7606337edd 1017 Gene3D G3DSA:1.10.1060.10 367 445 1.3E-11 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 SMART SM00260 17 157 1.0E-29 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 Pfam PF00072 Response regulator receiver domain 185 302 3.8E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 SUPERFAMILY SSF52172 179 308 1.35E-21 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 PIRSF PIRSF002867 1 311 2.4E-105 T 15-10-2018 IPR024181 Chemotaxis response regulator CheV VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 SUPERFAMILY SSF50341 16 160 1.7E-35 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 Pfam PF01584 CheW-like domain 21 159 1.0E-36 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 Gene3D G3DSA:3.40.50.2300 179 309 4.7E-22 T 15-10-2018 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 Gene3D G3DSA:2.40.50.180 39 157 4.3E-30 T 15-10-2018 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 SMART SM00448 183 303 1.3E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2338 6bfc224389fd31261986755048f0b7d9 312 Gene3D G3DSA:2.30.30.40 24 151 4.3E-30 T 15-10-2018 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 4.0E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 4.2E-22 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 4.2E-22 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 144 1.1E-58 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 7.5E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 Gene3D G3DSA:3.30.700.10 34 143 8.1E-43 T 15-10-2018 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 SUPERFAMILY SSF54523 38 144 1.2E-39 T 15-10-2018 VIBNI_A3376 61107801c59e6c54218c1c6706bd19f4 149 Pfam PF08334 Type II secretion system (T2SS), protein G 34 143 6.0E-42 T 15-10-2018 IPR013545 Type II secretion system protein G VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Pfam PF00005 ABC transporter 313 461 6.8E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Gene3D G3DSA:3.40.50.300 4 282 6.7E-71 T 15-10-2018 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Gene3D G3DSA:3.40.50.300 283 549 2.4E-79 T 15-10-2018 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 512 544 7.0E-7 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 272 2.3E-5 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 SMART SM00382 35 240 2.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 SMART SM00382 321 510 9.4E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 SUPERFAMILY SSF52540 286 532 9.53E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 Pfam PF00005 ABC transporter 26 189 1.3E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2540 a283b5667e5bc6889f4dd4eff5c05cb6 550 SUPERFAMILY SSF52540 4 270 3.26E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3475 4e2ccb1a2ef1df97c1b339f8d4fb7ec3 159 SUPERFAMILY SSF101307 8 151 4.58E-39 T 15-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VIBNI_A3475 4e2ccb1a2ef1df97c1b339f8d4fb7ec3 159 PIRSF PIRSF006162 3 159 1.4E-47 T 15-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VIBNI_A3475 4e2ccb1a2ef1df97c1b339f8d4fb7ec3 159 Pfam PF04608 Phosphatidylglycerophosphatase A 14 151 1.1E-48 T 15-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VIBNI_A1840 c7439a08e06b230af60ba3ad07ce8308 411 SUPERFAMILY SSF103365 12 411 6.8E-134 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 VIBNI_A1840 c7439a08e06b230af60ba3ad07ce8308 411 Gene3D G3DSA:3.90.1860.10 5 411 3.6E-114 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 VIBNI_A1840 c7439a08e06b230af60ba3ad07ce8308 411 Pfam PF01139 tRNA-splicing ligase RtcB 33 411 3.3E-127 T 15-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 PIRSF PIRSF000180 1 127 7.1E-55 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 SUPERFAMILY SSF81343 1 127 1.1E-50 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 Pfam PF02300 Fumarate reductase subunit C 2 127 3.3E-48 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-57 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 Gene3D G3DSA:1.20.1300.10 1 127 2.4E-46 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3238 2d9ee00066331766e482b365ae78e6ae 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.46 T 15-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VIBNI_B1092 f33b16831d5ac9fe2d08541e02e04e60 283 SUPERFAMILY SSF103481 189 280 1.44E-11 T 15-10-2018 VIBNI_B1092 f33b16831d5ac9fe2d08541e02e04e60 283 Pfam PF00892 EamA-like transporter family 149 279 1.6E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 Gene3D G3DSA:3.40.630.10 9 364 5.0E-127 T 15-10-2018 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 Pfam PF01546 Peptidase family M20/M25/M40 64 373 5.1E-43 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 SUPERFAMILY SSF55031 181 290 8.07E-28 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.102 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 Pfam PF07687 Peptidase dimerisation domain 177 280 1.0E-21 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 Gene3D G3DSA:3.30.70.360 181 294 5.0E-127 T 15-10-2018 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 SUPERFAMILY SSF53187 6 376 8.12E-64 T 15-10-2018 VIBNI_A0695 b599eb69d7709782d0ce25ee9c01671b 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.5E-181 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Gene3D G3DSA:2.40.30.20 1 93 3.5E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Gene3D G3DSA:1.20.150.20 383 513 1.7E-48 T 15-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.6E-251 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.0E-44 T 15-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.874 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Gene3D G3DSA:3.40.50.300 94 382 4.0E-129 T 15-10-2018 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 SUPERFAMILY SSF47917 383 511 7.06E-46 T 15-10-2018 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 SUPERFAMILY SSF52540 96 381 2.09E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3863 45bbe41fd097e799a5cd66ce69936fac 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-71 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A1082 5aa8a8aeb921daf6a7e0d4b44aa1f736 257 Gene3D G3DSA:3.20.20.370 1 253 1.0E-30 T 15-10-2018 VIBNI_A1082 5aa8a8aeb921daf6a7e0d4b44aa1f736 257 SUPERFAMILY SSF88713 1 251 5.11E-50 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A1082 5aa8a8aeb921daf6a7e0d4b44aa1f736 257 Pfam PF04794 YdjC-like protein 3 245 1.1E-44 T 15-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.7E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 Gene3D G3DSA:3.40.190.10 168 269 1.5E-51 T 15-10-2018 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 SUPERFAMILY SSF53850 95 301 6.15E-34 T 15-10-2018 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 SUPERFAMILY SSF46785 11 88 4.06E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 Pfam PF03466 LysR substrate binding domain 94 300 4.7E-33 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 Gene3D G3DSA:3.40.190.10 98 298 1.5E-51 T 15-10-2018 VIBNI_B1270 15b69058bcc89529b9aca1645d9c4484 302 Gene3D G3DSA:1.10.10.10 9 95 1.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 Gene3D G3DSA:3.60.20.10 2 411 4.9E-159 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 SUPERFAMILY SSF53271 249 482 3.41E-69 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 PIRSF PIRSF000485 1 479 6.5E-168 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 Gene3D G3DSA:3.40.50.2020 276 440 4.9E-159 T 15-10-2018 VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 SUPERFAMILY SSF56235 2 256 1.2E-72 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 5.9E-165 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.916 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VIBNI_A0809 67d9ee0e88030b0c7e96bcd195e27d84 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 4.9E-17 T 15-10-2018 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 Gene3D G3DSA:2.30.40.10 10 374 4.0E-108 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 SUPERFAMILY SSF51338 4 55 5.65E-9 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 PIRSF PIRSF038994 3 378 9.4E-100 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 Gene3D G3DSA:3.20.20.140 57 343 4.0E-108 T 15-10-2018 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 SUPERFAMILY SSF51556 56 346 3.78E-88 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 Pfam PF01979 Amidohydrolase family 52 372 3.7E-16 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A2744 eb1d3f1cf055f58175895e168a4176ab 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 374 4.5E-89 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 SUPERFAMILY SSF53850 99 299 1.86E-41 T 15-10-2018 VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 Gene3D G3DSA:3.40.190.290 100 298 3.1E-57 T 15-10-2018 VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 Pfam PF03466 LysR substrate binding domain 98 297 9.1E-38 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 Gene3D G3DSA:1.10.10.10 10 95 3.2E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 1.8E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3485 6bd607f14aadc42d50f2ce0907e8ed8e 304 SUPERFAMILY SSF46785 12 119 1.16E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2919 636d298445db09cfabbda134378446fc 126 Pfam PF04379 ApaG domain 18 103 6.4E-34 T 15-10-2018 IPR007474 ApaG domain VIBNI_A2919 636d298445db09cfabbda134378446fc 126 SUPERFAMILY SSF110069 7 126 1.09E-47 T 15-10-2018 IPR036767 ApaG domain superfamily VIBNI_A2919 636d298445db09cfabbda134378446fc 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.395 T 15-10-2018 IPR023065 Uncharacterised protein family ApaG VIBNI_A2919 636d298445db09cfabbda134378446fc 126 Gene3D G3DSA:2.60.40.1470 1 126 2.5E-46 T 15-10-2018 IPR036767 ApaG domain superfamily VIBNI_A1660 dcc0424a489d2ffa6cdaf5d79bcf63f1 290 Gene3D G3DSA:3.30.200.20 1 93 8.5E-21 T 15-10-2018 VIBNI_A1660 dcc0424a489d2ffa6cdaf5d79bcf63f1 290 Gene3D G3DSA:3.90.1200.10 97 290 2.2E-62 T 15-10-2018 VIBNI_A1660 dcc0424a489d2ffa6cdaf5d79bcf63f1 290 Pfam PF03881 Fructosamine kinase 1 287 1.6E-117 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VIBNI_A1660 dcc0424a489d2ffa6cdaf5d79bcf63f1 290 SUPERFAMILY SSF56112 10 281 2.11E-37 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A1660 dcc0424a489d2ffa6cdaf5d79bcf63f1 290 PIRSF PIRSF006221 1 290 2.9E-98 T 15-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.397 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.5E-119 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.4E-180 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 SUPERFAMILY SSF55205 1 417 1.96E-141 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 Gene3D G3DSA:3.65.10.10 21 228 1.3E-168 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_A2964 ae239c7f5c8bb4dcaa05c779af9efcae 420 Gene3D G3DSA:3.65.10.10 11 413 1.3E-168 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_B1798 51714f9c4fd52d5c1e727f9ce3f04ce4 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 4.6E-25 T 15-10-2018 VIBNI_B1798 51714f9c4fd52d5c1e727f9ce3f04ce4 220 Gene3D G3DSA:1.10.150.240 26 92 1.1E-39 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B1798 51714f9c4fd52d5c1e727f9ce3f04ce4 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 112 191 3.2E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1798 51714f9c4fd52d5c1e727f9ce3f04ce4 220 SUPERFAMILY SSF56784 11 194 4.28E-39 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1798 51714f9c4fd52d5c1e727f9ce3f04ce4 220 Gene3D G3DSA:3.40.50.1000 13 192 1.1E-39 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 Gene3D G3DSA:3.40.190.10 161 264 2.3E-33 T 15-10-2018 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 SUPERFAMILY SSF53850 88 287 5.43E-22 T 15-10-2018 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 Gene3D G3DSA:1.10.10.10 1 84 9.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 Gene3D G3DSA:3.40.190.10 88 282 2.3E-33 T 15-10-2018 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 Pfam PF03466 LysR substrate binding domain 87 287 9.4E-25 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 9.1E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.7E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0143 682b96683d8be58b1616847bc612b834 289 SUPERFAMILY SSF46785 1 82 3.15E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3260 810ce3e4015ae1ef39cced7f87c36822 158 PIRSF PIRSF029256 1 158 6.6E-64 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VIBNI_A3260 810ce3e4015ae1ef39cced7f87c36822 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 31.77 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VIBNI_A3260 810ce3e4015ae1ef39cced7f87c36822 158 SUPERFAMILY SSF75217 2 156 3.4E-42 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A3260 810ce3e4015ae1ef39cced7f87c36822 158 Pfam PF00588 SpoU rRNA Methylase family 2 145 2.0E-33 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VIBNI_A3260 810ce3e4015ae1ef39cced7f87c36822 158 Gene3D G3DSA:3.40.1280.10 1 158 1.4E-62 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_B0808 147182da751f5347e7c1426175ae3ef0 364 PIRSF PIRSF000014 1 364 2.7E-142 T 15-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VIBNI_B0808 147182da751f5347e7c1426175ae3ef0 364 SUPERFAMILY SSF48695 10 179 1.55E-43 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily VIBNI_B0808 147182da751f5347e7c1426175ae3ef0 364 Gene3D G3DSA:1.10.3820.10 1 180 2.5E-36 T 15-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VIBNI_B0808 147182da751f5347e7c1426175ae3ef0 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 2 174 1.7E-64 T 15-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VIBNI_A0271 014c80248f17885a2ae3d73351126a33 411 Gene3D G3DSA:3.40.190.10 137 394 7.1E-125 T 15-10-2018 VIBNI_A0271 014c80248f17885a2ae3d73351126a33 411 Gene3D G3DSA:3.40.190.10 23 368 7.1E-125 T 15-10-2018 VIBNI_A0271 014c80248f17885a2ae3d73351126a33 411 Pfam PF01547 Bacterial extracellular solute-binding protein 65 287 1.5E-13 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A0271 014c80248f17885a2ae3d73351126a33 411 SUPERFAMILY SSF53850 23 384 3.71E-40 T 15-10-2018 VIBNI_A1868 fc7164bdf2c2e3db7a7793cafb731a1e 150 SUPERFAMILY SSF55729 1 139 2.44E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1868 fc7164bdf2c2e3db7a7793cafb731a1e 150 Gene3D G3DSA:3.40.630.30 41 148 4.9E-25 T 15-10-2018 VIBNI_A1868 fc7164bdf2c2e3db7a7793cafb731a1e 150 Pfam PF00583 Acetyltransferase (GNAT) family 48 133 3.6E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 15-10-2018 IPR022272 Lipocalin family conserved site VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 65 74 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 29 43 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 132 143 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 99 113 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 46 62 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PRINTS PR01171 Bacterial lipocalin signature 159 169 2.7E-36 T 15-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 Pfam PF08212 Lipocalin-like domain 30 170 2.3E-40 T 15-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 Gene3D G3DSA:2.40.128.20 9 173 7.2E-50 T 15-10-2018 IPR012674 Calycin VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 PIRSF PIRSF036893 1 174 3.5E-44 T 15-10-2018 IPR022271 Lipocalin, ApoD type VIBNI_A2185 f169590c931129ce4d08455c133f5d0a 174 SUPERFAMILY SSF50814 6 172 2.37E-51 T 15-10-2018 IPR012674 Calycin VIBNI_A2132 2d9c8831b31f8e4e54fc3e409f710658 742 Gene3D G3DSA:3.40.718.10 415 651 3.6E-9 T 15-10-2018 VIBNI_A2132 2d9c8831b31f8e4e54fc3e409f710658 742 SUPERFAMILY SSF53659 5 741 0.0 T 15-10-2018 VIBNI_A2132 2d9c8831b31f8e4e54fc3e409f710658 742 PIRSF PIRSF009407 1 742 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VIBNI_A2132 2d9c8831b31f8e4e54fc3e409f710658 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VIBNI_A2132 2d9c8831b31f8e4e54fc3e409f710658 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 742 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 2.3E-58 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 SUPERFAMILY SSF53254 1 198 3.8E-57 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 Gene3D G3DSA:3.40.50.1240 2 202 9.5E-63 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 SMART SM00855 3 157 3.3E-22 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_B1290 64caa6d26ff37064ec618a2f94ea9308 202 PIRSF PIRSF000709 2 170 3.2E-14 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 2.7E-146 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SMART SM00400 36 90 1.9E-38 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Pfam PF08278 DNA primase DnaG DnaB-binding 455 578 4.2E-35 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Pfam PF10410 DnaB-helicase binding domain of primase 375 430 7.8E-9 T 15-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Gene3D G3DSA:3.40.1360.10 246 372 1.5E-41 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Gene3D G3DSA:1.10.860.10 443 584 9.9E-56 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Pfam PF01807 CHC2 zinc finger 6 101 8.9E-42 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SMART SM00493 264 335 1.2E-17 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Gene3D G3DSA:3.90.580.10 1 102 1.1E-39 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Hamap MF_00974 DNA primase [dnaG]. 4 580 29.033 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SUPERFAMILY SSF117023 451 582 3.79E-44 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SUPERFAMILY SSF56731 121 430 1.05E-108 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Gene3D G3DSA:1.20.50.20 373 431 2.3E-9 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SUPERFAMILY SSF57783 4 101 6.12E-38 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Pfam PF08275 DNA primase catalytic core, N-terminal domain 131 255 3.9E-42 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 SMART SM00766 454 579 1.7E-53 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Pfam PF13155 Toprim-like 268 355 3.9E-13 T 15-10-2018 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 PIRSF PIRSF002811 2 581 3.1E-142 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VIBNI_A2869 80c8991edf564b5da51fdd8b14b481ee 584 Gene3D G3DSA:3.90.980.10 120 245 5.3E-44 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 SUPERFAMILY SSF53850 89 297 3.36E-41 T 15-10-2018 VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 Gene3D G3DSA:1.10.10.10 3 89 2.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 Gene3D G3DSA:3.40.190.290 91 294 2.1E-58 T 15-10-2018 VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 SUPERFAMILY SSF46785 4 88 8.02E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1694 504c596aa810d269b231a8adaa396d56 314 Pfam PF03466 LysR substrate binding domain 89 293 9.5E-39 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Gene3D G3DSA:3.90.199.10 34 485 7.6E-179 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Gene3D G3DSA:1.10.268.10 371 456 7.6E-179 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 15-10-2018 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.815 T 15-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 SMART SM00434 13 463 2.1E-227 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 SUPERFAMILY SSF101904 499 743 1.03E-50 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 SUPERFAMILY SSF56719 33 485 5.49E-154 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.026 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.5E-7 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 2.2E-133 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Gene3D G3DSA:3.30.1360.40 240 333 7.6E-179 T 15-10-2018 VIBNI_A0202 115c05daa4cdbeece296bdd6eeb15bde 762 Gene3D G3DSA:2.120.10.90 502 746 6.0E-15 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 263 1.9E-60 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 163 183 1.2E-21 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 220 1.2E-21 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 245 263 1.2E-21 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 1.2E-21 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.2E-21 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 Gene3D G3DSA:2.120.10.30 3 291 5.5E-68 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A1769 73727cff6654327d03f6702da5e0d062 302 SUPERFAMILY SSF63829 6 289 1.13E-44 T 15-10-2018 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 206 2.4E-73 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 Gene3D G3DSA:3.30.930.10 3 206 1.8E-64 T 15-10-2018 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 161 8.6E-8 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 Hamap MF_00013 Octanoyltransferase [lipB]. 7 208 38.705 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 1.0E-20 T 15-10-2018 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 SUPERFAMILY SSF55681 7 207 6.63E-70 T 15-10-2018 VIBNI_A2719 7421bf051f21106273b7db5f28f9da74 219 PIRSF PIRSF016262 4 218 3.9E-62 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 69 74 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 SUPERFAMILY SSF50494 8 277 1.18E-54 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 Pfam PF00089 Trypsin 26 270 3.9E-38 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 1.9E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 59 74 1.9E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 217 229 1.9E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 SMART SM00020 25 270 1.5E-40 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0822 2ff2597577019745870ee3235d6301b5 329 Gene3D G3DSA:2.40.10.10 18 274 1.7E-50 T 15-10-2018 VIBNI_A2833 de0c84d555c92c10036b0ee3b9d5d835 540 Gene3D G3DSA:1.10.3720.10 13 266 3.0E-50 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2833 de0c84d555c92c10036b0ee3b9d5d835 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 254 1.6E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2833 de0c84d555c92c10036b0ee3b9d5d835 540 SUPERFAMILY SSF161098 11 257 2.75E-40 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2833 de0c84d555c92c10036b0ee3b9d5d835 540 SUPERFAMILY SSF161098 281 534 4.45E-36 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2833 de0c84d555c92c10036b0ee3b9d5d835 540 Gene3D G3DSA:1.10.3720.10 284 539 4.0E-33 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 Gene3D G3DSA:3.30.70.100 186 280 7.5E-29 T 15-10-2018 VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 Pfam PF05552 Conserved TM helix 23 70 2.0E-12 T 15-10-2018 IPR008910 Conserved TM helix VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 Gene3D G3DSA:2.30.30.60 136 185 2.0E-21 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 Pfam PF00924 Mechanosensitive ion channel 79 275 1.7E-56 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 SUPERFAMILY SSF82689 188 284 9.81E-34 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 SUPERFAMILY SSF50182 121 186 3.11E-17 T 15-10-2018 IPR010920 LSM domain superfamily VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 150 184 - T 15-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VIBNI_A0087 9932fc35af15aa9f480cd91a66a4486e 288 SUPERFAMILY SSF82861 34 119 6.54E-18 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.4E-35 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 Pfam PF00107 Zinc-binding dehydrogenase 175 300 5.2E-32 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 Gene3D G3DSA:3.40.50.720 148 285 4.5E-135 T 15-10-2018 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 Gene3D G3DSA:3.90.180.10 12 332 4.5E-135 T 15-10-2018 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 SMART SM00829 11 334 5.6E-8 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 SUPERFAMILY SSF51735 138 305 2.71E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3310 b118cc3fd2fc1526fe6532610d36f250 337 SUPERFAMILY SSF50129 1 158 4.57E-57 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Gene3D G3DSA:3.40.50.300 123 303 2.3E-65 T 15-10-2018 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 SUPERFAMILY SSF46689 400 446 8.36E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Gene3D G3DSA:1.10.8.60 304 381 5.6E-22 T 15-10-2018 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 SUPERFAMILY SSF52540 132 375 5.86E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 1.1E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Pfam PF00072 Response regulator receiver domain 2 108 5.1E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Gene3D G3DSA:1.10.10.60 400 444 2.7E-10 T 15-10-2018 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 SMART SM00382 152 295 6.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 SUPERFAMILY SSF52172 2 176 1.04E-41 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-32 T 15-10-2018 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 SMART SM00448 1 108 4.6E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 218 233 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A0914 d76d9f95eeb31e4d79102b5aa3a1180c 449 Pfam PF00158 Sigma-54 interaction domain 133 298 6.9E-69 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 Gene3D G3DSA:1.10.10.10 2 77 8.8E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 Pfam PF01380 SIS domain 128 255 6.6E-16 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 SUPERFAMILY SSF46689 2 75 9.32E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 Gene3D G3DSA:3.40.50.10490 96 278 2.1E-36 T 15-10-2018 VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 SUPERFAMILY SSF53697 96 276 1.21E-30 T 15-10-2018 VIBNI_A2379 726474fd197d3673b033e8bd1f0ffe84 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 71 5.8E-15 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 Gene3D G3DSA:1.20.1250.20 217 453 1.3E-56 T 15-10-2018 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 223 436 3.8E-47 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 7 215 1.3E-59 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 Gene3D G3DSA:1.20.1250.20 4 216 1.6E-66 T 15-10-2018 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 SUPERFAMILY SSF103473 8 432 2.75E-44 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 Pfam PF00854 POT family 229 403 1.2E-30 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 Pfam PF00854 POT family 88 198 1.3E-30 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VIBNI_A2597 ca11b5c464d3f8ff860c4ebbbd75b89d 463 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VIBNI_A2508 7d2c6828b1e2c3108d94a5296bcff744 244 SUPERFAMILY SSF55120 2 238 3.36E-61 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2508 7d2c6828b1e2c3108d94a5296bcff744 244 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.2E-30 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2508 7d2c6828b1e2c3108d94a5296bcff744 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2508 7d2c6828b1e2c3108d94a5296bcff744 244 Gene3D G3DSA:3.30.2350.10 2 235 9.3E-60 T 15-10-2018 VIBNI_A1007 95d9513ce4c21d20e0ce5939f600fcb4 112 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 93 1.1E-15 T 15-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 VIBNI_A1007 95d9513ce4c21d20e0ce5939f600fcb4 112 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 14 109 4.9E-34 T 15-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 223 3.2E-36 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 Pfam PF11104 Type IV pilus assembly protein PilM; 238 327 1.2E-12 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 SUPERFAMILY SSF53067 5 166 3.88E-5 T 15-10-2018 VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 Gene3D G3DSA:3.30.1490.300 82 142 1.4E-50 T 15-10-2018 VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 Gene3D G3DSA:3.30.420.40 7 326 1.4E-50 T 15-10-2018 VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 PIRSF PIRSF019169 1 330 2.0E-83 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 Gene3D G3DSA:3.30.420.40 183 294 1.4E-50 T 15-10-2018 VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 328 4.3E-85 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM VIBNI_A3585 29ebc25f8b353301f9b57d691f9bc48c 338 SUPERFAMILY SSF53067 184 326 2.16E-7 T 15-10-2018 VIBNI_A2400 85058e0ac352faa2780705d9173bc203 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.829 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 VIBNI_A2400 85058e0ac352faa2780705d9173bc203 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 6.5E-60 T 15-10-2018 IPR007334 Uncharacterised protein family UPF0208 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.4E-264 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 Gene3D G3DSA:3.50.30.80 421 573 2.5E-55 T 15-10-2018 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 Pfam PF00920 Dehydratase family 34 604 1.0E-218 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 SUPERFAMILY SSF143975 3 420 4.18E-135 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 SUPERFAMILY SSF52016 421 608 6.12E-60 T 15-10-2018 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.016 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A3853 cb1339013fe23ff0cb4802e256fa9a50 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 Pfam PF00206 Lyase 14 313 3.9E-75 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 3.2E-152 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.9E-52 T 15-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 Gene3D G3DSA:1.10.40.30 383 446 4.6E-160 T 15-10-2018 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.6E-19 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 2.6E-19 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 2.6E-19 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.6E-19 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 Gene3D G3DSA:1.20.200.10 118 447 4.6E-160 T 15-10-2018 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 SUPERFAMILY SSF48557 4 448 1.46E-112 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VIBNI_A2137 1953a68dbf358796bd5218a3d67bca4c 456 Gene3D G3DSA:1.10.275.10 1 117 3.8E-50 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal VIBNI_B2160 66d723ff99258636f321f789b98e8271 94 Gene3D G3DSA:1.10.1220.10 2 76 4.9E-6 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VIBNI_B2160 66d723ff99258636f321f789b98e8271 94 Pfam PF04221 RelB antitoxin 5 74 1.6E-5 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 SUPERFAMILY SSF53328 5 207 6.28E-65 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 SUPERFAMILY SSF50486 208 310 2.98E-32 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 Gene3D G3DSA:3.10.25.10 210 314 7.0E-37 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 9.7E-29 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 Pfam PF00551 Formyl transferase 6 182 1.2E-44 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 Gene3D G3DSA:3.40.50.170 1 209 1.3E-83 T 15-10-2018 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 7.6E-106 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VIBNI_A3837 269051ebade48bfa13e5480cc6932e25 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.083 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 SUPERFAMILY SSF117892 115 246 3.27E-22 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 SMART SM00244 81 241 3.1E-46 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 TIGRFAM TIGR01933 hflK: HflK protein 83 343 6.5E-116 T 15-10-2018 IPR010201 HflK GO:0016021 VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 Pfam PF12221 Bacterial membrane protein N terminal 1 51 9.7E-15 T 15-10-2018 IPR020980 Menbrane protein HflK, N-terminal VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 Pfam PF01145 SPFH domain / Band 7 family 85 256 5.0E-28 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 PRINTS PR00721 Stomatin signature 191 214 7.2E-7 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 PRINTS PR00721 Stomatin signature 135 156 7.2E-7 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 PRINTS PR00721 Stomatin signature 88 110 7.2E-7 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A3216 d7d7c6ca805a45f9d4caa0c02233df51 393 Gene3D G3DSA:3.30.479.30 111 243 9.6E-23 T 15-10-2018 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 SUPERFAMILY SSF52540 151 352 1.25E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 Gene3D G3DSA:2.70.210.12 1 158 6.8E-58 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.2E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 SUPERFAMILY SSF82051 2 157 1.44E-54 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 PIRSF PIRSF002401 1 373 7.7E-137 T 15-10-2018 IPR035101 GTP-binding protein, Obg-type VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 Gene3D G3DSA:3.40.50.300 159 336 1.4E-51 T 15-10-2018 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.78 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 Pfam PF01018 GTP1/OBG 4 156 4.7E-55 T 15-10-2018 IPR006169 GTP1/OBG domain VIBNI_A2924 938e34b2a3c65de4770bf6b2a73efbdf 388 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 7.6E-143 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 Pfam PF13411 MerR HTH family regulatory protein 2 66 8.4E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 SMART SM00422 1 69 2.8E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.5E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 4.5E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.5E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 SUPERFAMILY SSF46955 1 111 3.19E-25 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B2150 9e34fffaebd141289334e8a7b9788dc6 117 Gene3D G3DSA:1.10.1660.10 1 116 3.2E-25 T 15-10-2018 VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 SUPERFAMILY SSF51735 3 235 5.22E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.1E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.1E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.1E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 2.1E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.1E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 234 6.4E-29 T 15-10-2018 VIBNI_B1495 9eea81f08255d8f79f25db8a9d8ffd2d 236 Gene3D G3DSA:3.40.50.720 1 235 1.9E-46 T 15-10-2018 VIBNI_A2864 0b8abd0e5e8f6d4af84eb3775c9d663b 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 193 8.9E-74 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VIBNI_A2864 0b8abd0e5e8f6d4af84eb3775c9d663b 201 SMART SM01207 10 185 4.5E-84 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VIBNI_A2864 0b8abd0e5e8f6d4af84eb3775c9d663b 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.0E-50 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VIBNI_A2864 0b8abd0e5e8f6d4af84eb3775c9d663b 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.597 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 3.7E-36 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 1.6E-43 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 SUPERFAMILY SSF51246 331 448 3.92E-40 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 SUPERFAMILY SSF52440 2 114 2.95E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 SMART SM00878 336 442 1.4E-49 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 Gene3D G3DSA:3.30.470.130 1 448 4.6E-187 T 15-10-2018 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 SUPERFAMILY SSF56059 84 352 2.65E-66 T 15-10-2018 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 3.2E-73 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_B0749 585fdab108ee9f46ae2af6ad3dacca34 465 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 SUPERFAMILY SSF53850 88 293 5.91E-31 T 15-10-2018 VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 Gene3D G3DSA:1.10.10.10 3 91 8.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 Gene3D G3DSA:3.40.190.10 164 262 4.2E-42 T 15-10-2018 VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 Gene3D G3DSA:3.40.190.10 92 287 4.2E-42 T 15-10-2018 VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.3E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 SUPERFAMILY SSF46785 3 111 1.96E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3317 e0e5baf403de3ce3b4f132be874f8354 295 Pfam PF03466 LysR substrate binding domain 89 288 2.9E-30 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 1.0E-36 T 15-10-2018 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 Gene3D G3DSA:3.30.70.1150 80 157 9.8E-29 T 15-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 SUPERFAMILY SSF55021 79 161 1.64E-27 T 15-10-2018 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.3E-26 T 15-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.4E-62 T 15-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 SUPERFAMILY SSF55021 1 75 5.15E-22 T 15-10-2018 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 Gene3D G3DSA:3.30.70.260 1 78 9.4E-33 T 15-10-2018 VIBNI_A2888 a5fe2e8fd555b64cbae00b85ed4f8ce5 164 Pfam PF13710 ACT domain 11 73 9.9E-18 T 15-10-2018 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 Gene3D G3DSA:3.40.50.10490 3 221 3.2E-81 T 15-10-2018 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 Pfam PF01380 SIS domain 132 213 2.5E-9 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 15-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 298 3.0E-133 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 SUPERFAMILY SSF53697 9 251 2.67E-70 T 15-10-2018 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 43.201 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_B0081 ced4223cc4630be811017b632859d1b7 304 Gene3D G3DSA:1.10.8.1080 222 300 2.1E-29 T 15-10-2018 VIBNI_A2539 ce48d0b66eba5a9b482bee3fad409a64 519 SUPERFAMILY SSF53067 5 72 2.27E-6 T 15-10-2018 VIBNI_A2539 ce48d0b66eba5a9b482bee3fad409a64 519 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 6 174 4.1E-37 T 15-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 VIBNI_A2539 ce48d0b66eba5a9b482bee3fad409a64 519 Pfam PF01968 Hydantoinase/oxoprolinase 195 367 1.7E-34 T 15-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 VIBNI_A2539 ce48d0b66eba5a9b482bee3fad409a64 519 SUPERFAMILY SSF53067 271 446 1.05E-18 T 15-10-2018 VIBNI_A2539 ce48d0b66eba5a9b482bee3fad409a64 519 Gene3D G3DSA:3.30.420.40 5 71 1.2E-5 T 15-10-2018 VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 Gene3D G3DSA:1.10.10.10 2 66 9.0E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 57 1.2E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 Pfam PF07729 FCD domain 91 211 1.2E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 Gene3D G3DSA:1.20.120.530 86 225 6.3E-23 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 SUPERFAMILY SSF46785 3 66 3.5E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 SMART SM00895 90 212 1.4E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 52 1.8E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 22 36 1.8E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 SUPERFAMILY SSF48008 87 219 1.7E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B2047 57004c2f7a5cdf5c8d4ba39cde2a44f7 226 SMART SM00345 3 62 1.0E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 SUPERFAMILY SSF46894 700 768 6.8E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 SMART SM00421 706 763 8.0E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 Pfam PF00196 Bacterial regulatory proteins, luxR family 709 763 3.2E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 Gene3D G3DSA:1.10.10.10 709 769 3.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 739 751 5.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 723 739 5.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2543 5c3de812da01a7a31749fd0cb3775672 769 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 709 723 5.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 7.8E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 7.8E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 7.8E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 7.8E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Gene3D G3DSA:1.10.287.130 246 340 7.4E-26 T 15-10-2018 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Pfam PF00072 Response regulator receiver domain 526 636 6.6E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SMART SM00448 523 636 3.6E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SMART SM00388 277 342 3.0E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SUPERFAMILY SSF55874 331 505 1.26E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 503 6.1E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SUPERFAMILY SSF47384 262 343 8.24E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SUPERFAMILY SSF52172 520 639 4.13E-29 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Gene3D G3DSA:3.40.50.2300 511 642 6.7E-30 T 15-10-2018 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 SMART SM00387 389 504 7.8E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 342 1.4E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0364 ecc518107d79af29ea7766e24c6e962f 770 Gene3D G3DSA:3.30.565.10 341 507 9.4E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 Pfam PF00171 Aldehyde dehydrogenase family 19 479 2.5E-139 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 483 4.4E-207 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 SUPERFAMILY SSF53720 2 484 4.45E-145 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 Gene3D G3DSA:3.40.605.10 23 460 2.4E-150 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 Gene3D G3DSA:3.40.309.10 249 452 2.4E-150 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B2099 9b6d77eb31ec66792029270116b80681 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 SUPERFAMILY SSF50249 15 101 5.9E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 SUPERFAMILY SSF55681 104 464 1.63E-95 T 15-10-2018 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.9E-81 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 8.0E-206 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 Gene3D G3DSA:3.30.930.10 109 465 2.0E-109 T 15-10-2018 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.3E-14 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 Gene3D G3DSA:2.40.50.140 3 106 1.3E-19 T 15-10-2018 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.7E-11 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VIBNI_A2008 e8ee526ac2096d6213079d494151c02e 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.701 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 Pfam PF13377 Periplasmic binding protein-like domain 170 331 1.1E-42 T 15-10-2018 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 Gene3D G3DSA:3.40.50.2300 70 323 2.3E-88 T 15-10-2018 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 Gene3D G3DSA:1.10.260.40 3 60 3.5E-22 T 15-10-2018 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 Gene3D G3DSA:3.40.50.2300 162 291 2.3E-88 T 15-10-2018 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.8E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.8E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 SMART SM00354 1 72 7.1E-33 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 SUPERFAMILY SSF53822 61 335 4.71E-95 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 SUPERFAMILY SSF47413 1 60 1.45E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 VIBNI_B0130 b42e2bf2856243c252cf5d39e549006e 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 2.3E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 Gene3D G3DSA:1.10.10.10 17 89 2.4E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 SUPERFAMILY SSF46785 19 87 3.0E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 7.8E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.1E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 Gene3D G3DSA:3.40.1410.10 90 250 3.8E-47 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 SMART SM00345 24 83 9.0E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 SMART SM00866 106 242 4.2E-37 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 SUPERFAMILY SSF64288 71 248 3.61E-47 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0087 4a898c1c48b7a3d04d32b384f6c24c3e 252 Pfam PF07702 UTRA domain 106 242 1.5E-38 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Gene3D G3DSA:3.40.930.10 1 142 1.1E-38 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 SUPERFAMILY SSF55804 4 141 3.92E-37 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 SUPERFAMILY SSF55804 149 274 2.09E-12 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 3.1E-30 T 15-10-2018 IPR002178 PTS EIIA type-2 domain VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 167 274 5.0E-8 T 15-10-2018 IPR002178 PTS EIIA type-2 domain VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Gene3D G3DSA:3.40.930.10 147 275 1.1E-7 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 303 310 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Gene3D G3DSA:3.30.1340.10 292 379 1.6E-28 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 PRINTS PR00107 Phosphocarrier protein signature 346 363 9.5E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 PRINTS PR00107 Phosphocarrier protein signature 303 319 9.5E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 PRINTS PR00107 Phosphocarrier protein signature 331 346 9.5E-19 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 Pfam PF00381 PTS HPr component phosphorylation site 294 374 2.8E-25 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 SUPERFAMILY SSF55594 293 380 1.13E-24 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 332 347 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VIBNI_B0825 e0925e416583339390aa6ccd978f4fc4 381 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 295 374 6.2E-23 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 2.1E-25 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Gene3D G3DSA:1.20.1330.10 192 328 1.1E-17 T 15-10-2018 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Gene3D G3DSA:1.20.1330.10 45 175 1.3E-71 T 15-10-2018 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 SUPERFAMILY SSF64518 1 376 2.35E-97 T 15-10-2018 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Pfam PF07196 Flagellin hook IN motif 194 249 6.4E-10 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.1E-41 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Gene3D G3DSA:1.10.8.410 329 376 1.1E-19 T 15-10-2018 VIBNI_A0709 c5364ce80a99f3eed976a46e7f969a30 377 Gene3D G3DSA:1.20.58.1830 5 33 1.3E-71 T 15-10-2018 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 SUPERFAMILY SSF51621 4 263 1.15E-104 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.5E-106 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 Gene3D G3DSA:3.20.20.60 1 264 2.2E-105 T 15-10-2018 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 PIRSF PIRSF000388 1 264 3.8E-100 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.9E-113 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VIBNI_A2851 045d79170952cc4f56a255546712574f 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.453 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 Gene3D G3DSA:2.160.10.10 1 186 2.8E-67 T 15-10-2018 VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 4.0E-10 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 SUPERFAMILY SSF51161 3 184 1.39E-51 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 Pfam PF12464 Maltose acetyltransferase 7 53 2.9E-12 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B0889 36b7267f6744c6c488e37a795fd026f7 186 SMART SM01266 5 58 1.4E-11 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B1178 2e61444f8f4e97505d64115083522655 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 258 4.0E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1178 2e61444f8f4e97505d64115083522655 267 Gene3D G3DSA:1.10.3720.10 70 266 1.6E-27 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1178 2e61444f8f4e97505d64115083522655 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 266 4.2E-82 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 VIBNI_B1178 2e61444f8f4e97505d64115083522655 267 SUPERFAMILY SSF161098 72 256 3.92E-34 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2706 020456734a7a56951dec0aae6914fbd1 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 2.5E-93 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VIBNI_A2706 020456734a7a56951dec0aae6914fbd1 506 Pfam PF00795 Carbon-nitrogen hydrolase 223 472 8.7E-36 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VIBNI_A2706 020456734a7a56951dec0aae6914fbd1 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.695 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VIBNI_A2706 020456734a7a56951dec0aae6914fbd1 506 SUPERFAMILY SSF56317 217 485 3.66E-40 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_A2706 020456734a7a56951dec0aae6914fbd1 506 Gene3D G3DSA:3.60.110.10 214 476 9.5E-15 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 SUPERFAMILY SSF103039 141 328 4.58E-38 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 Gene3D G3DSA:3.40.1550.10 139 327 6.4E-30 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 SUPERFAMILY SSF52172 4 126 2.7E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 Pfam PF00072 Response regulator receiver domain 5 115 5.6E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 Gene3D G3DSA:3.40.50.2300 2 127 3.0E-27 T 15-10-2018 VIBNI_B1238 19106f79beacc19665dae384524acb7f 334 SMART SM00448 3 115 9.4E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 Gene3D G3DSA:2.40.33.10 70 170 1.7E-142 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 Gene3D G3DSA:3.40.1380.20 340 467 1.7E-142 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 472 1.2E-146 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 SUPERFAMILY SSF50800 70 167 1.15E-22 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 317 333 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 298 316 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 248 272 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 221 247 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 273 297 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.7E-55 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 Gene3D G3DSA:3.20.20.60 3 339 1.7E-142 T 15-10-2018 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 Pfam PF00224 Pyruvate kinase, barrel domain 3 339 7.8E-125 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 445 2.9E-8 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 SUPERFAMILY SSF51621 3 340 2.9E-85 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B1116 badc08ba93ea13e34c2926b7f998de18 485 SUPERFAMILY SSF52935 327 442 2.75E-14 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 SUPERFAMILY SSF54897 50 130 2.44E-11 T 15-10-2018 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Gene3D G3DSA:3.30.70.80 42 126 8.8E-14 T 15-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 447 511 5.7E-13 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 SUPERFAMILY SSF52743 140 394 6.68E-82 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Gene3D G3DSA:3.40.50.200 140 423 4.4E-101 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Gene3D G3DSA:2.60.120.380 426 525 1.8E-36 T 15-10-2018 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 SUPERFAMILY SSF89260 431 522 4.32E-5 T 15-10-2018 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Pfam PF00082 Subtilase family 167 394 6.1E-37 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 Pfam PF05922 Peptidase inhibitor I9 53 130 1.6E-11 T 15-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 5.5E-21 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 5.5E-21 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0264 52b6cc97e2fb6c743b6984b2ad654a0d 525 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 5.5E-21 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Gene3D G3DSA:3.40.50.300 302 570 6.8E-86 T 15-10-2018 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Gene3D G3DSA:3.40.50.300 2 289 1.4E-84 T 15-10-2018 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 269 9.4E-5 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 535 565 0.0012 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 SUPERFAMILY SSF52540 306 554 6.63E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 SMART SM00382 339 535 1.9E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 SMART SM00382 33 232 1.0E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 SUPERFAMILY SSF52540 4 254 1.11E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Pfam PF00005 ABC transporter 331 484 5.6E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 Pfam PF00005 ABC transporter 25 182 2.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3491 ab9ff5454e47bdd0eabaae270f7b99a8 572 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0592 67b43c7a8458d1cc052d6a1a7ed2c459 216 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 5 206 1.2E-81 T 15-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 VIBNI_B0592 67b43c7a8458d1cc052d6a1a7ed2c459 216 Pfam PF00881 Nitroreductase family 18 181 7.9E-30 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VIBNI_B0592 67b43c7a8458d1cc052d6a1a7ed2c459 216 Gene3D G3DSA:3.40.109.10 1 187 5.6E-53 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B0592 67b43c7a8458d1cc052d6a1a7ed2c459 216 SUPERFAMILY SSF55469 6 213 1.44E-48 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 PIRSF PIRSF001225 1 209 6.0E-92 T 15-10-2018 IPR008223 Urease, gamma-beta subunit GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-36 T 15-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.857 T 15-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 SUPERFAMILY SSF51278 109 209 1.05E-44 T 15-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Pfam PF00547 Urease, gamma subunit 1 99 5.7E-45 T 15-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Pfam PF00699 Urease beta subunit 111 207 3.0E-42 T 15-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Hamap MF_01954 Urease subunit beta [ureB]. 109 209 30.011 T 15-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 110 207 1.1E-43 T 15-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Gene3D G3DSA:2.10.150.10 103 209 4.7E-45 T 15-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 Gene3D G3DSA:3.30.280.10 1 100 9.1E-46 T 15-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.5E-52 T 15-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0599 d725c1d86787bd3acbc1d05366a01866 209 SUPERFAMILY SSF54111 1 99 4.71E-44 T 15-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 SMART SM00895 111 233 5.2E-22 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 Pfam PF07729 FCD domain 111 230 6.9E-23 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 SMART SM00345 23 82 9.4E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 Gene3D G3DSA:1.20.120.530 109 246 2.4E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 1.8E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 SUPERFAMILY SSF48008 109 241 9.68E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 SUPERFAMILY SSF46785 18 86 3.12E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0972 f5c00497f6210d040c98dda8aed636a5 247 Gene3D G3DSA:1.10.10.10 16 87 6.9E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 Gene3D G3DSA:2.40.50.140 293 349 1.8E-29 T 15-10-2018 VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 SMART SM00382 30 213 5.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 SUPERFAMILY SSF50331 238 365 4.13E-22 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 Gene3D G3DSA:2.40.50.940 224 358 1.8E-29 T 15-10-2018 VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 Gene3D G3DSA:3.40.50.300 4 223 1.1E-68 T 15-10-2018 VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 Pfam PF00005 ABC transporter 21 163 5.6E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1398 dccf82b19269fc7170ba5ca30c236602 367 SUPERFAMILY SSF52540 4 246 1.82E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 Gene3D G3DSA:1.20.120.530 82 215 1.5E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 SUPERFAMILY SSF46785 12 81 5.45E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.8E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 Pfam PF07729 FCD domain 87 210 2.7E-23 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 SMART SM00895 87 211 6.2E-14 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 SMART SM00345 19 77 8.0E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 SUPERFAMILY SSF48008 82 214 6.02E-22 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 Gene3D G3DSA:1.10.10.10 4 77 2.2E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0440 fd157a6b80bf14e792762a7a618623ad 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 6.8E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 14 598 0.0 T 15-10-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Gene3D G3DSA:3.40.50.970 396 585 2.0E-49 T 15-10-2018 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 572 5.9E-34 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Gene3D G3DSA:3.40.50.1220 195 376 9.9E-45 T 15-10-2018 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 SUPERFAMILY SSF52467 192 376 1.16E-39 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 180 1.2E-43 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Gene3D G3DSA:3.40.50.970 8 186 1.1E-47 T 15-10-2018 VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 SUPERFAMILY SSF52518 400 595 1.24E-47 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 SUPERFAMILY SSF52518 13 187 5.89E-43 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1899 b08b6450ec58bb40dca2bbb7adcf4856 602 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 337 1.3E-30 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 Pfam PF00970 Oxidoreductase FAD-binding domain 22 99 2.3E-4 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 SUPERFAMILY SSF63380 2 101 7.74E-17 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 Gene3D G3DSA:2.40.30.10 1 102 1.7E-22 T 15-10-2018 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 Gene3D G3DSA:3.40.50.80 103 237 9.0E-28 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 1.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.5E-13 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 SUPERFAMILY SSF52343 104 235 7.99E-34 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3781 86b28471263a4fd3b9edc7bee0877e46 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.9E-22 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 180 4.5E-7 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 Gene3D G3DSA:3.40.30.10 1 88 2.5E-26 T 15-10-2018 VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 85 4.7E-14 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 Gene3D G3DSA:1.20.1050.10 89 202 1.4E-27 T 15-10-2018 VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 SUPERFAMILY SSF47616 78 202 6.02E-21 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B1515 c2f490fc91482dbf99a3e875fcd4a234 215 SUPERFAMILY SSF52833 2 85 2.84E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1467 7dba1f0ab3ce4a8ec25475cba2d1c2b7 427 Pfam PF02687 FtsX-like permease family 322 420 7.1E-7 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_B1467 7dba1f0ab3ce4a8ec25475cba2d1c2b7 427 Pfam PF12704 MacB-like periplasmic core domain 20 254 3.9E-23 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A3637 3fe94a6263b09519a4ed70a894253b75 249 SUPERFAMILY SSF53448 41 241 8.02E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3637 3fe94a6263b09519a4ed70a894253b75 249 Gene3D G3DSA:3.90.550.10 4 229 8.0E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3637 3fe94a6263b09519a4ed70a894253b75 249 Pfam PF13641 Glycosyltransferase like family 2 48 236 1.4E-6 T 15-10-2018 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 Pfam PF00672 HAMP domain 215 261 3.6E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 SUPERFAMILY SSF58104 234 542 2.22E-70 T 15-10-2018 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 SMART SM00283 280 541 7.2E-65 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 SMART SM00304 213 265 1.2E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 Gene3D G3DSA:1.10.287.950 213 542 3.0E-72 T 15-10-2018 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 508 6.2E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 1.9E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.9E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1351 2166a64089885e4ecf693701266bf794 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.9E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B0527 dc4fca0b4d5bd2fe8b4e929cc5d29dad 314 Pfam PF00480 ROK family 17 307 3.1E-33 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_B0527 dc4fca0b4d5bd2fe8b4e929cc5d29dad 314 Gene3D G3DSA:3.30.420.40 137 295 1.6E-46 T 15-10-2018 VIBNI_B0527 dc4fca0b4d5bd2fe8b4e929cc5d29dad 314 SUPERFAMILY SSF53067 17 312 6.02E-41 T 15-10-2018 VIBNI_B0527 dc4fca0b4d5bd2fe8b4e929cc5d29dad 314 Gene3D G3DSA:3.30.420.40 18 307 1.6E-46 T 15-10-2018 VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 SUPERFAMILY SSF51735 8 173 1.29E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 1.4E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 Gene3D G3DSA:3.30.360.10 147 388 5.4E-118 T 15-10-2018 VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 276 6.0E-13 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 Gene3D G3DSA:3.40.50.720 17 363 5.4E-118 T 15-10-2018 VIBNI_A2159 e659251182aac2aee717d17a067c567c 392 SUPERFAMILY SSF55347 149 318 3.01E-32 T 15-10-2018 VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 SUPERFAMILY SSF103190 208 298 2.98E-22 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 SUPERFAMILY SSF55785 352 463 1.68E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Gene3D G3DSA:3.30.450.20 347 462 2.8E-21 T 15-10-2018 VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 616 3.5E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Gene3D G3DSA:3.30.70.270 463 622 6.1E-47 T 15-10-2018 VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 SMART SM00267 454 617 5.6E-47 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 SUPERFAMILY SSF55073 470 616 6.04E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Gene3D G3DSA:3.30.450.20 207 301 3.5E-32 T 15-10-2018 VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 613 1.0E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 SUPERFAMILY SSF103190 36 205 1.18E-23 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Gene3D G3DSA:3.30.450.20 73 206 8.9E-21 T 15-10-2018 VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 Pfam PF13426 PAS domain 352 453 8.8E-11 T 15-10-2018 IPR000014 PAS domain VIBNI_A2887 9c131bf66b769f02893e49d06cc8f2f7 624 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 461 1.4E-15 T 15-10-2018 IPR000014 PAS domain VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SMART SM00436 140 228 1.2E-45 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 9.9E-10 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 55.111 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:2.70.20.10 220 479 1.4E-161 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SUPERFAMILY SSF56712 3 615 9.94E-198 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:2.20.25.10 813 870 2.2E-26 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF01131 DNA topoisomerase 166 571 1.8E-126 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:1.10.290.10 287 411 1.4E-161 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 8.8E-248 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:3.30.65.10 701 749 7.6E-7 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:3.30.65.10 750 812 8.1E-33 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SMART SM00493 3 139 2.1E-32 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SUPERFAMILY SSF57783 814 870 2.55E-21 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:1.10.460.10 172 577 1.4E-161 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Gene3D G3DSA:3.40.50.140 1 170 4.3E-66 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SUPERFAMILY SSF57783 705 748 9.01E-6 T 15-10-2018 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 3.6E-17 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 15-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 2.4E-36 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 2.4E-36 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 2.4E-36 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 2.4E-36 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 2.4E-36 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SMART SM00437 279 533 1.4E-117 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 Pfam PF01751 Toprim domain 5 149 3.1E-33 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A2121 bebf885459ec4fcf1e5688d49e54a759 876 SUPERFAMILY SSF57783 749 812 1.21E-19 T 15-10-2018 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 Gene3D G3DSA:3.40.50.150 158 342 1.4E-41 T 15-10-2018 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 5.9E-56 T 15-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 Pfam PF05175 Methyltransferase small domain 173 337 2.8E-58 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 Gene3D G3DSA:3.40.50.150 1 157 2.6E-50 T 15-10-2018 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 SUPERFAMILY SSF53335 158 333 7.99E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2819 d211ebad404dc72b2ca36d45ba112a19 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.085 T 15-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 PIRSF PIRSF000813 1 403 2.9E-199 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Pfam PF01966 HD domain 229 345 4.5E-9 T 15-10-2018 IPR006674 HD domain VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.593 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 SUPERFAMILY SSF81891 120 359 2.35E-55 T 15-10-2018 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Pfam PF01743 Poly A polymerase head domain 3 122 1.5E-20 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Gene3D G3DSA:3.30.460.10 1 121 4.4E-30 T 15-10-2018 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 SUPERFAMILY SSF81301 2 119 9.26E-33 T 15-10-2018 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.193 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Gene3D G3DSA:1.10.3090.10 122 403 2.0E-46 T 15-10-2018 VIBNI_A0186 ab515ee6cd8135f1262f6c147704fc7a 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 6.1E-14 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Gene3D G3DSA:3.30.450.20 17 149 1.1E-30 T 15-10-2018 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SUPERFAMILY SSF55785 131 245 4.33E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Gene3D G3DSA:1.10.287.130 285 347 3.4E-21 T 15-10-2018 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SMART SM00387 392 502 4.8E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 3.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 3.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 3.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 480 3.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 345 3.6E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SUPERFAMILY SSF55785 24 136 3.49E-25 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SMART SM00086 93 135 2.6E-9 T 15-10-2018 IPR001610 PAC motif VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SMART SM00388 280 350 4.3E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Gene3D G3DSA:3.30.565.10 349 503 3.2E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 499 9.2E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SUPERFAMILY SSF55874 347 500 1.02E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Gene3D G3DSA:3.30.450.20 150 274 1.0E-7 T 15-10-2018 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Pfam PF13188 PAS domain 143 200 1.1E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SMART SM00091 143 211 1.3E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SMART SM00091 19 87 1.3E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 SUPERFAMILY SSF47384 278 346 1.39E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 Pfam PF08447 PAS fold 44 128 6.9E-17 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_A0952 6d61328defe4883eb9169e2cc34a1006 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 140 3.8E-19 T 15-10-2018 IPR000014 PAS domain VIBNI_A0047 91920feffdf734181c22bf981510703b 239 Gene3D G3DSA:3.40.50.150 29 239 3.2E-72 T 15-10-2018 VIBNI_A0047 91920feffdf734181c22bf981510703b 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 2.1E-70 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VIBNI_A0047 91920feffdf734181c22bf981510703b 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.495 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VIBNI_A0047 91920feffdf734181c22bf981510703b 239 Pfam PF02390 Putative methyltransferase 62 232 1.4E-59 T 15-10-2018 VIBNI_A0047 91920feffdf734181c22bf981510703b 239 SUPERFAMILY SSF53335 16 237 1.22E-36 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 Pfam PF00005 ABC transporter 22 174 9.9E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 Gene3D G3DSA:3.40.50.300 244 494 6.1E-48 T 15-10-2018 VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 Pfam PF00005 ABC transporter 273 426 3.9E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 SMART SM00382 31 222 3.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 SMART SM00382 281 475 5.9E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 Gene3D G3DSA:3.40.50.300 2 243 3.2E-54 T 15-10-2018 VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 SUPERFAMILY SSF52540 262 486 9.1E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1762 f272a6b8c8603c75ab78e5e513f7be81 501 SUPERFAMILY SSF52540 6 233 9.43E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 8.8E-295 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Gene3D G3DSA:3.50.50.60 296 458 7.0E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Gene3D G3DSA:3.50.50.60 1 231 5.4E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 SUPERFAMILY SSF51905 6 261 3.59E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Gene3D G3DSA:1.10.150.570 569 622 1.7E-22 T 15-10-2018 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 SMART SM01228 546 617 5.4E-42 T 15-10-2018 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Gene3D G3DSA:1.10.10.1800 459 550 5.1E-32 T 15-10-2018 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.89 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Pfam PF01134 Glucose inhibited division protein A 8 399 1.7E-168 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VIBNI_A3872 07f43458ab4c5b05aa0347ba729e834d 630 Pfam PF13932 GidA associated domain 403 616 3.2E-77 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VIBNI_A0883 7f313b20a8e7cefc3a3ccc376c88eab6 438 Pfam PF01627 Hpt domain 347 428 1.3E-13 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0883 7f313b20a8e7cefc3a3ccc376c88eab6 438 SUPERFAMILY SSF47226 318 432 7.85E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0883 7f313b20a8e7cefc3a3ccc376c88eab6 438 Gene3D G3DSA:1.20.120.160 325 437 2.1E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0883 7f313b20a8e7cefc3a3ccc376c88eab6 438 SMART SM00073 336 432 2.0E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 167 183 1.2E-5 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 198 1.2E-5 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 SMART SM00419 161 209 2.5E-7 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 Pfam PF13545 Crp-like helix-turn-helix domain 144 215 1.5E-14 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 Gene3D G3DSA:2.60.120.10 4 137 3.3E-27 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 SUPERFAMILY SSF51206 5 138 7.99E-27 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 SMART SM00100 5 124 1.5E-14 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 Gene3D G3DSA:1.10.10.10 138 216 6.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 Pfam PF00027 Cyclic nucleotide-binding domain 24 110 1.2E-15 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_B0482 f2967d4e0ca4d6e88c2e5505158d3e5b 236 SUPERFAMILY SSF46785 144 223 1.26E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.6E-38 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 Gene3D G3DSA:3.40.1280.10 78 244 7.6E-64 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 SUPERFAMILY SSF55315 3 77 2.24E-19 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 Gene3D G3DSA:3.30.1330.30 1 77 8.5E-27 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.8E-18 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 SUPERFAMILY SSF75217 69 244 3.27E-47 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.4E-85 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.521 T 15-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VIBNI_A3207 6ef124e6b616ecd70884a04cd131ac85 246 SMART SM00967 5 81 3.3E-18 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VIBNI_A3273 e5d8489c9457515d90c00902274af5ab 165 Pfam PF00583 Acetyltransferase (GNAT) family 51 136 2.7E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3273 e5d8489c9457515d90c00902274af5ab 165 SUPERFAMILY SSF55729 1 162 6.93E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3273 e5d8489c9457515d90c00902274af5ab 165 Gene3D G3DSA:3.40.630.30 1 164 8.7E-26 T 15-10-2018 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 SUPERFAMILY SSF109604 229 382 1.66E-18 T 15-10-2018 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 Gene3D G3DSA:1.20.120.160 12 150 6.8E-24 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 Pfam PF01627 Hpt domain 17 105 2.5E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 Pfam PF13487 HD domain 270 332 7.1E-15 T 15-10-2018 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 Gene3D G3DSA:1.10.3210.10 203 389 4.0E-40 T 15-10-2018 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 SUPERFAMILY SSF47226 14 122 1.96E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2075 69c4ee1035ff6fb7dee7971adb5afd19 390 SMART SM00073 13 110 3.7E-8 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 SUPERFAMILY SSF111369 58 285 1.7E-24 T 15-10-2018 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 Gene3D G3DSA:1.10.287.470 102 179 3.0E-56 T 15-10-2018 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 Gene3D G3DSA:2.40.50.100 68 214 3.0E-56 T 15-10-2018 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 345 6.2E-60 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 270 1.1E-20 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 Gene3D G3DSA:2.40.30.170 59 287 3.0E-56 T 15-10-2018 VIBNI_B1122 d26ca915e56f4dc6f1ce138ada740e4d 348 Gene3D G3DSA:2.40.420.20 288 341 3.0E-56 T 15-10-2018 VIBNI_A3426 deef50101eb42047e7317c4d47e1464e 256 Gene3D G3DSA:1.25.40.10 25 246 1.2E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3426 deef50101eb42047e7317c4d47e1464e 256 SUPERFAMILY SSF48452 37 232 3.11E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3426 deef50101eb42047e7317c4d47e1464e 256 Pfam PF13432 Tetratricopeptide repeat 71 133 8.8E-6 T 15-10-2018 VIBNI_A3426 deef50101eb42047e7317c4d47e1464e 256 Pfam PF13432 Tetratricopeptide repeat 153 196 0.0044 T 15-10-2018 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 PRINTS PR00315 GTP-binding elongation factor signature 162 171 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 PRINTS PR00315 GTP-binding elongation factor signature 89 97 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 PRINTS PR00315 GTP-binding elongation factor signature 125 136 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 PRINTS PR00315 GTP-binding elongation factor signature 28 41 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 PRINTS PR00315 GTP-binding elongation factor signature 109 119 3.8E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 1.9E-45 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 Gene3D G3DSA:3.40.50.300 6 239 3.0E-73 T 15-10-2018 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 SUPERFAMILY SSF52540 19 235 3.13E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 1.7E-13 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 SUPERFAMILY SSF50447 242 324 1.04E-24 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 SUPERFAMILY SSF50465 333 434 4.41E-28 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 9.4E-199 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 Gene3D G3DSA:2.40.30.10 331 433 1.3E-28 T 15-10-2018 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 Gene3D G3DSA:2.40.30.10 243 327 3.8E-28 T 15-10-2018 VIBNI_A3135 e1fce44093319426a817edf7c616abe4 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.622 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VIBNI_A2499 749a18f85766870046e3818e302b119f 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VIBNI_A2499 749a18f85766870046e3818e302b119f 280 Pfam PF01148 Cytidylyltransferase family 2 278 1.1E-68 T 15-10-2018 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.144 T 15-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 SUPERFAMILY SSF55174 320 394 9.42E-15 T 15-10-2018 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.5E-24 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.5E-24 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-24 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.5E-24 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 Gene3D G3DSA:3.40.50.620 5 217 1.9E-73 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 6.4E-127 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 SUPERFAMILY SSF52374 6 315 1.62E-97 T 15-10-2018 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 Gene3D G3DSA:1.10.240.10 218 326 2.5E-34 T 15-10-2018 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 1.2E-79 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2812 e53181065158c9a8968eef7bd92c60b1 395 Gene3D G3DSA:3.10.290.10 327 394 1.4E-15 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 Gene3D G3DSA:3.40.50.720 2 254 1.1E-81 T 15-10-2018 VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 SUPERFAMILY SSF51735 14 253 1.13E-81 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.7E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.7E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.7E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 7.9E-68 T 15-10-2018 VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1510 fdd50b48ca273c5ec5ee55196e672004 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.7E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1315 107fc256872d67b6dc482d302d733498 402 Pfam PF07670 Nucleoside recognition 90 185 3.4E-7 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_B1315 107fc256872d67b6dc482d302d733498 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.4E-71 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VIBNI_B1315 107fc256872d67b6dc482d302d733498 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 1.2E-139 T 15-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VIBNI_B1315 107fc256872d67b6dc482d302d733498 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.6E-25 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 Gene3D G3DSA:3.40.50.150 40 260 6.9E-76 T 15-10-2018 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 27 259 1.1E-102 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 5.7E-84 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.303 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VIBNI_A3416 e63c32c3892f52d72513e29a26eac353 260 SUPERFAMILY SSF53335 28 258 3.72E-53 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2438 5290c5a51bed3c897fe2df65831c256d 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 279 2.6E-79 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2438 5290c5a51bed3c897fe2df65831c256d 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.4E-104 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2438 5290c5a51bed3c897fe2df65831c256d 332 Gene3D G3DSA:3.40.190.170 27 328 4.0E-89 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2438 5290c5a51bed3c897fe2df65831c256d 332 PIRSF PIRSF006470 1 332 2.8E-122 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Gene3D G3DSA:1.10.220.30 107 211 2.8E-27 T 15-10-2018 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 SUPERFAMILY SSF48029 25 134 4.18E-18 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 19 348 1.9E-92 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Gene3D G3DSA:1.10.220.30 213 350 1.7E-43 T 15-10-2018 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 SUPERFAMILY SSF48029 132 343 1.22E-65 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 3.1E-56 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 PIRSF PIRSF003161 17 350 1.2E-110 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Pfam PF01706 FliG C-terminal domain 236 342 8.9E-41 T 15-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Pfam PF14841 FliG middle domain 133 205 5.6E-24 T 15-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Gene3D G3DSA:1.10.220.30 21 102 4.3E-14 T 15-10-2018 VIBNI_A0724 ba54bd1c6ad501c7b828a40d39b40b8e 350 Pfam PF14842 FliG N-terminal domain 24 123 5.0E-25 T 15-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.8E-24 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Gene3D G3DSA:3.40.120.10 1 171 1.8E-47 T 15-10-2018 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 1.5E-38 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 SUPERFAMILY SSF55957 374 459 3.92E-17 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 SUPERFAMILY SSF53738 2 187 7.85E-42 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 SUPERFAMILY SSF53738 250 379 1.61E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 1.1E-24 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Gene3D G3DSA:3.40.120.10 263 370 5.2E-59 T 15-10-2018 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 465 6.7E-8 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Gene3D G3DSA:3.40.120.10 172 365 5.2E-59 T 15-10-2018 VIBNI_A2831 573809c4546161f224dfcca9e87914a0 470 Gene3D G3DSA:3.30.310.50 382 469 1.5E-15 T 15-10-2018 VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 SUPERFAMILY SSF55486 209 382 2.12E-12 T 15-10-2018 VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 119 444 8.2E-62 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 SMART SM00089 764 842 3.3E-19 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 SUPERFAMILY SSF49299 760 841 4.71E-20 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 Gene3D G3DSA:2.60.40.10 757 841 1.3E-31 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 Pfam PF05547 Immune inhibitor A peptidase M6 109 751 1.1E-202 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 Pfam PF00801 PKD domain 783 830 7.0E-11 T 15-10-2018 IPR000601 PKD domain VIBNI_A0656 6c06ef83627579c00a4bb9a7b6644338 922 PIRSF PIRSF007519 2 761 6.2E-231 T 15-10-2018 IPR012300 Peptidase M6, InhA VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 Gene3D G3DSA:2.40.170.20 162 695 1.6E-116 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 SUPERFAMILY SSF56935 17 695 4.27E-113 T 15-10-2018 VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 22 695 5.5E-151 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 29 - T 15-10-2018 IPR010916 TonB box, conserved site VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 145 5.2E-27 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 Gene3D G3DSA:2.170.130.10 21 150 1.3E-35 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 Pfam PF00593 TonB dependent receptor 174 693 8.0E-56 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B1128 cd9c2197fffaae102e091c3979b0956b 695 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 22 695 6.3E-137 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 PIRSF PIRSF000774 1 490 9.8E-155 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 4.8E-17 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 PRINTS PR00045 Sigma-54 factor signature 201 218 7.7E-32 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 PRINTS PR00045 Sigma-54 factor signature 389 401 7.7E-32 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 PRINTS PR00045 Sigma-54 factor signature 463 481 7.7E-32 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 PRINTS PR00045 Sigma-54 factor signature 405 416 7.7E-32 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 Gene3D G3DSA:1.10.10.60 430 487 2.3E-23 T 15-10-2018 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 Pfam PF04552 Sigma-54, DNA binding domain 330 488 1.8E-72 T 15-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 468 475 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 Pfam PF04963 Sigma-54 factor, core binding domain 129 318 4.8E-61 T 15-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 Gene3D G3DSA:1.10.10.1330 131 249 1.4E-25 T 15-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 377 396 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2951 5558f5bc584f12afa92352bbbc099716 490 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 487 1.3E-156 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 660 4.6E-112 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 662 731 1.5E-7 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.9E-38 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 Gene3D G3DSA:3.20.70.20 78 741 3.6E-154 T 15-10-2018 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 Pfam PF03477 ATP cone domain 6 92 6.0E-19 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.7E-176 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.2E-11 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 SUPERFAMILY SSF51998 222 740 3.36E-165 T 15-10-2018 VIBNI_A2053 3925de297ba81ef57c5f829e7d18dd7c 760 SUPERFAMILY SSF48168 10 221 9.16E-74 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 ProSitePatterns PS00161 Isocitrate lyase signature. 122 127 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 SUPERFAMILY SSF51621 7 295 8.52E-94 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 299 49.333 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 Pfam PF13714 Phosphoenolpyruvate phosphomutase 19 261 5.4E-45 T 15-10-2018 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 298 1.6E-124 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VIBNI_A1832 520d12fbd0418832070a855a5d3853df 300 Gene3D G3DSA:3.20.20.60 2 300 2.4E-95 T 15-10-2018 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 Gene3D G3DSA:3.90.1150.10 25 392 4.4E-153 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 SUPERFAMILY SSF53383 16 400 1.75E-129 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 Pfam PF00202 Aminotransferase class-III 22 399 5.6E-129 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.6E-209 T 15-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 2.5E-151 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.592 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 Gene3D G3DSA:3.40.640.10 59 304 4.4E-153 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 PIRSF PIRSF000521 172 402 1.6E-37 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A3556 da57df27a737309c97dbc3af3d2b8058 403 PIRSF PIRSF000521 28 155 3.6E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_B0648 1721709fd03f44a5abbcf4db8ef877c3 542 Gene3D G3DSA:3.30.750.24 433 536 2.0E-11 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0648 1721709fd03f44a5abbcf4db8ef877c3 542 SUPERFAMILY SSF52091 439 517 3.14E-9 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0648 1721709fd03f44a5abbcf4db8ef877c3 542 Pfam PF00916 Sulfate permease family 26 393 6.5E-96 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 SUPERFAMILY SSF53383 1 423 3.56E-133 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 Gene3D G3DSA:3.40.640.10 69 317 3.8E-179 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 6.4E-194 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 Pfam PF00202 Aminotransferase class-III 33 395 4.0E-78 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.636 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VIBNI_A2817 24b6fe4ed1f59521f7c62f64be8d5408 429 Gene3D G3DSA:3.90.1150.10 7 419 3.8E-179 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 Gene3D G3DSA:3.30.565.10 519 672 6.6E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 561 666 4.6E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 613 2.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 2.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 2.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 627 2.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 447 512 1.8E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 SMART SM00387 557 668 3.2E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 Gene3D G3DSA:1.10.287.130 431 512 3.0E-22 T 15-10-2018 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 SUPERFAMILY SSF103190 157 308 2.04E-14 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 Pfam PF17202 Single cache domain 3 203 316 1.0E-26 T 15-10-2018 IPR033463 Single cache domain 3 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 SMART SM00388 447 514 3.6E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 SUPERFAMILY SSF47384 442 511 9.22E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1678 ef49b0625e6b8f78305d5b6dbda2cf2a 677 SUPERFAMILY SSF55874 504 666 6.29E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 9.0E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 9.0E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 9.0E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 9.0E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 Gene3D G3DSA:3.40.50.1000 3 208 1.6E-40 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 Pfam PF00583 Acetyltransferase (GNAT) family 256 372 1.9E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 Gene3D G3DSA:3.40.630.30 233 387 4.0E-16 T 15-10-2018 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 Gene3D G3DSA:1.10.150.520 16 101 1.6E-40 T 15-10-2018 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 SUPERFAMILY SSF56784 1 224 1.71E-37 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 103 200 2.8E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 SUPERFAMILY SSF55729 248 382 4.32E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 64 195 1.8E-13 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1394 bd2ed4b062d61863185330141ad014e7 395 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 200 1.1E-27 T 15-10-2018 VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Pfam PF03527 RHS protein 1039 1072 5.7E-12 T 15-10-2018 IPR001826 RHS protein VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1065 1140 6.4E-28 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Pfam PF05593 RHS Repeat 424 459 6.6E-5 T 15-10-2018 IPR031325 RHS repeat VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Pfam PF05593 RHS Repeat 591 633 5.8E-5 T 15-10-2018 IPR031325 RHS repeat VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 611 636 4.7E-5 T 15-10-2018 IPR006530 YD repeat VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 465 503 9.2E-5 T 15-10-2018 IPR006530 YD repeat VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 510 548 5.2E-5 T 15-10-2018 IPR006530 YD repeat VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 PRINTS PR00394 RHS protein signature 1032 1052 1.3E-12 T 15-10-2018 IPR001826 RHS protein VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 PRINTS PR00394 RHS protein signature 1085 1105 1.3E-12 T 15-10-2018 IPR001826 RHS protein VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 PRINTS PR00394 RHS protein signature 1108 1127 1.3E-12 T 15-10-2018 IPR001826 RHS protein VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Gene3D G3DSA:3.90.930.1 412 549 3.1E-14 T 15-10-2018 VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Gene3D G3DSA:3.90.930.1 638 731 2.1E-5 T 15-10-2018 VIBNI_A1446 6e80c0d4787ea84d376891a8e1a1e88e 1484 Gene3D G3DSA:2.180.10.10 890 1140 3.1E-40 T 15-10-2018 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 420 31.811 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 Gene3D G3DSA:3.40.50.1980 22 222 1.5E-95 T 15-10-2018 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 98 125 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 191 216 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 24 48 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 161 187 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 220 241 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 242 261 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 6.7E-64 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 220 252 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 Pfam PF00815 Histidinol dehydrogenase 14 419 4.2E-133 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 PIRSF PIRSF000099 2 423 4.7E-120 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 Gene3D G3DSA:3.40.50.1980 224 342 1.5E-95 T 15-10-2018 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 SUPERFAMILY SSF53720 28 420 1.47E-63 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A1932 6778ac3d7cd293042b310fa56ab268e8 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 24 418 5.0E-132 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 SUPERFAMILY SSF52317 1 189 1.6E-38 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 Pfam PF01965 DJ-1/PfpI family 2 169 9.4E-17 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 SUPERFAMILY SSF46689 207 256 4.92E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 Gene3D G3DSA:3.40.50.880 1 201 1.2E-45 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 Pfam PF12833 Helix-turn-helix domain 228 307 1.9E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 SUPERFAMILY SSF46689 259 308 2.46E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 SMART SM00342 222 305 2.5E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0382 e93fc570eef1e7261bd0d8573c229f8d 311 Gene3D G3DSA:1.10.10.60 206 310 2.0E-27 T 15-10-2018 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.586 T 15-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.3E-23 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 4.3E-23 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 4.3E-23 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.4E-34 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 Pfam PF01197 Ribosomal protein L31 1 66 8.9E-32 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 SUPERFAMILY SSF143800 1 68 5.49E-27 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 Gene3D G3DSA:2.30.170.50 1 71 5.2E-33 T 15-10-2018 VIBNI_A3603 8f926e2b52c03a1d9a78bf5684864302 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 5.6E-102 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 PIRSF PIRSF005917 1 286 2.5E-108 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.49 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 15-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 Gene3D G3DSA:3.30.950.10 121 241 7.2E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 SUPERFAMILY SSF53790 12 232 4.71E-85 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 3.2E-29 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0218 d07d3dd16fcfe460f19e9650d33f990a 287 Gene3D G3DSA:3.40.1010.10 2 120 1.6E-47 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 Gene3D G3DSA:3.30.230.10 295 534 1.9E-88 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 SUPERFAMILY SSF54211 316 512 1.06E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 318 334 2.6E-10 T 15-10-2018 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 431 450 2.6E-10 T 15-10-2018 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 461 479 2.6E-10 T 15-10-2018 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 401 420 2.6E-10 T 15-10-2018 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 402 506 2.2E-10 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 Gene3D G3DSA:3.40.50.300 26 207 2.3E-14 T 15-10-2018 VIBNI_A1779 52512c4a4c72e3679824638eaaff9451 553 Pfam PF13654 AAA domain 81 291 2.7E-25 T 15-10-2018 VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 Gene3D G3DSA:3.30.450.20 2 115 1.6E-10 T 15-10-2018 VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 Pfam PF13188 PAS domain 6 52 7.9E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 Pfam PF00990 Diguanylate cyclase, GGDEF domain 125 281 3.9E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 SMART SM00267 114 286 4.1E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 SUPERFAMILY SSF55785 5 116 2.66E-7 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 SUPERFAMILY SSF55073 130 285 3.3E-40 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 121 284 9.3E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0641 ed04e4a9c6c99a46aec7ea90dd2d40d0 293 Gene3D G3DSA:3.30.70.270 120 287 4.7E-45 T 15-10-2018 VIBNI_A0893 20eb6b5219d44f88a9d30b2650628da5 110 SUPERFAMILY SSF52833 1 104 3.85E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0893 20eb6b5219d44f88a9d30b2650628da5 110 Gene3D G3DSA:3.40.30.10 2 106 1.2E-30 T 15-10-2018 VIBNI_A0893 20eb6b5219d44f88a9d30b2650628da5 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.2E-46 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related VIBNI_A0893 20eb6b5219d44f88a9d30b2650628da5 110 Pfam PF00462 Glutaredoxin 16 80 4.6E-17 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_A0893 20eb6b5219d44f88a9d30b2650628da5 110 PIRSF PIRSF005894 1 107 1.6E-51 T 15-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PIRSF PIRSF036431 233 686 8.3E-81 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PIRSF PIRSF036431 2 98 130.0 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 Gene3D G3DSA:1.10.287.130 421 508 2.4E-18 T 15-10-2018 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 684 3.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 SMART SM00387 552 686 8.0E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 SMART SM00388 445 513 0.0018 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 Gene3D G3DSA:1.20.1480.50 311 412 1.1E-7 T 15-10-2018 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 SMART SM00304 352 407 1.1E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 Gene3D G3DSA:3.30.565.10 514 685 4.7E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 SUPERFAMILY SSF55874 523 683 9.56E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 684 1.6E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.6E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 1.6E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 1.6E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3282 da1667d50052b771353490d74419b0d0 686 SUPERFAMILY SSF47384 441 510 4.71E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 711 9.0E-117 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 Pfam PF00593 TonB dependent receptor 258 711 8.0E-51 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 Gene3D G3DSA:2.40.170.20 169 712 1.9E-131 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 Gene3D G3DSA:2.170.130.10 32 167 8.6E-30 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 15-10-2018 IPR010916 TonB box, conserved site VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 SUPERFAMILY SSF56935 30 711 2.01E-127 T 15-10-2018 VIBNI_A0831 7886841cdb3f7b3c7c68b99517fd40de 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 5.3E-17 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_A2282 e9519be4997e7aedb99959c09db601af 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 6.5E-102 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VIBNI_A2282 e9519be4997e7aedb99959c09db601af 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.2E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A2282 e9519be4997e7aedb99959c09db601af 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 114.0 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VIBNI_A2282 e9519be4997e7aedb99959c09db601af 243 Gene3D G3DSA:3.60.21.10 1 230 2.1E-16 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A2282 e9519be4997e7aedb99959c09db601af 243 SUPERFAMILY SSF56300 1 225 7.1E-28 T 15-10-2018 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Gene3D G3DSA:3.30.410.40 148 467 1.7E-181 T 15-10-2018 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Gene3D G3DSA:1.10.1220.110 93 147 1.7E-181 T 15-10-2018 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 PIRSF PIRSF000137 1 531 1.0E-160 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 78 101 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Pfam PF00732 GMC oxidoreductase 2 292 2.2E-94 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 SUPERFAMILY SSF51905 1 529 4.63E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Pfam PF05199 GMC oxidoreductase 384 521 4.1E-41 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Gene3D G3DSA:4.10.450.10 35 193 1.7E-181 T 15-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 Gene3D G3DSA:3.50.50.60 2 526 1.7E-181 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0421 931809bd2fd73677ffdf54558d48dcb1 531 SUPERFAMILY SSF54373 287 470 6.97E-56 T 15-10-2018 VIBNI_A2190 04a23d0ca97cc6b8f632c6a94ea35b12 148 Gene3D G3DSA:3.40.630.30 3 148 4.9E-25 T 15-10-2018 VIBNI_A2190 04a23d0ca97cc6b8f632c6a94ea35b12 148 Pfam PF00583 Acetyltransferase (GNAT) family 33 126 3.4E-6 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2190 04a23d0ca97cc6b8f632c6a94ea35b12 148 SUPERFAMILY SSF55729 14 138 5.32E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 SUPERFAMILY SSF53901 271 392 1.04E-44 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 PIRSF PIRSF000429 1 394 3.4E-124 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.7E-46 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 Pfam PF00108 Thiolase, N-terminal domain 6 260 2.5E-87 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 5.2E-135 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 Gene3D G3DSA:3.40.47.10 8 276 1.2E-143 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 SUPERFAMILY SSF53901 5 269 6.59E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1234 85caa51bad0c1f139830166c11d57e84 394 Gene3D G3DSA:3.40.47.10 128 389 1.2E-143 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 SUPERFAMILY SSF52540 4 243 1.2E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 SUPERFAMILY SSF50331 236 366 3.16E-24 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 Pfam PF00005 ABC transporter 19 161 4.9E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 Gene3D G3DSA:3.40.50.300 4 221 5.4E-67 T 15-10-2018 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 Pfam PF08402 TOBE domain 281 359 1.4E-6 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 SMART SM00382 28 219 1.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 Gene3D G3DSA:2.40.50.940 222 360 7.5E-31 T 15-10-2018 VIBNI_A0306 80418424e32f4f67c3c08a347474d7b2 370 Gene3D G3DSA:2.40.50.140 288 351 7.5E-31 T 15-10-2018 VIBNI_B1669 377879b79971859e7857beda601a1140 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 3.5E-21 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B1669 377879b79971859e7857beda601a1140 128 SUPERFAMILY SSF54593 1 127 4.83E-33 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1669 377879b79971859e7857beda601a1140 128 Gene3D G3DSA:3.10.180.10 7 126 1.7E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 Pfam PF02311 AraC-like ligand binding domain 23 153 1.5E-24 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 SMART SM00342 191 273 1.1E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 Gene3D G3DSA:1.10.10.60 233 276 1.6E-12 T 15-10-2018 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 SUPERFAMILY SSF51215 36 156 5.1E-18 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 Pfam PF12833 Helix-turn-helix domain 197 274 7.7E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 SUPERFAMILY SSF46689 176 225 2.29E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 SUPERFAMILY SSF46689 227 274 2.39E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 Gene3D G3DSA:1.10.10.60 171 232 5.1E-17 T 15-10-2018 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 3.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1289 949b7c5d96147c6322f944bf2375874f 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 3.7E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 Pfam PF04542 Sigma-70 region 2 29 94 8.9E-18 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 Gene3D G3DSA:1.10.1740.10 9 91 6.9E-19 T 15-10-2018 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 175 1.5E-21 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 SUPERFAMILY SSF88659 116 176 8.97E-12 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 Pfam PF08281 Sigma-70, region 4 119 171 2.6E-10 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 15-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 SUPERFAMILY SSF88946 22 104 6.28E-22 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0764 d3fca5efd6f58cd920b2dbaafbeb328e 187 Gene3D G3DSA:1.10.10.10 114 178 1.4E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0976 2ead9d85cf659a3e45ced12ee8ef2427 158 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.2E-49 T 15-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VIBNI_A0976 2ead9d85cf659a3e45ced12ee8ef2427 158 SUPERFAMILY SSF52728 3 157 6.54E-50 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VIBNI_A0976 2ead9d85cf659a3e45ced12ee8ef2427 158 Gene3D G3DSA:3.40.35.10 1 156 6.6E-54 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VIBNI_A0976 2ead9d85cf659a3e45ced12ee8ef2427 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 1.1E-66 T 15-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 Hamap MF_00422 Protein translocase subunit SecE [secE]. 74 129 12.869 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 79 107 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 78 128 1.0E-19 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 PRINTS PR01650 Bacterial translocase SecE signature 52 73 5.1E-35 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 PRINTS PR01650 Bacterial translocase SecE signature 97 117 5.1E-35 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 PRINTS PR01650 Bacterial translocase SecE signature 117 133 5.1E-35 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 PRINTS PR01650 Bacterial translocase SecE signature 73 93 5.1E-35 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 77 129 3.3E-17 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VIBNI_A3333 32e113ab91aaf4718f415c518b63b3d5 133 Gene3D G3DSA:1.20.5.1030 74 130 3.5E-17 T 15-10-2018 IPR038379 SecE superfamily VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 Gene3D G3DSA:3.40.605.10 16 408 9.2E-154 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 2.9E-170 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 SUPERFAMILY SSF53720 5 408 1.44E-112 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 Pfam PF00171 Aldehyde dehydrogenase family 8 280 5.5E-17 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.829 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 15-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 PIRSF PIRSF000151 1 415 9.6E-168 T 15-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VIBNI_A0651 e44bd97df41299b35233839673f719d3 416 Gene3D G3DSA:3.40.309.10 223 373 9.2E-154 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Pfam PF00732 GMC oxidoreductase 8 296 4.7E-85 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Gene3D G3DSA:3.50.50.60 8 532 2.7E-167 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Gene3D G3DSA:3.30.410.40 152 473 2.7E-167 T 15-10-2018 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 255 269 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Pfam PF05199 GMC oxidoreductase 390 528 1.1E-36 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Gene3D G3DSA:1.10.1220.110 98 151 2.7E-167 T 15-10-2018 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 PIRSF PIRSF000137 2 539 3.4E-142 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 SUPERFAMILY SSF51905 6 535 1.31E-80 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 Gene3D G3DSA:4.10.450.10 40 197 2.7E-167 T 15-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VIBNI_B0441 63901187d5bc4812d71fd4e6c019667c 540 SUPERFAMILY SSF54373 291 476 2.94E-44 T 15-10-2018 VIBNI_A2953 69ede12e096395c6cc4bb8b032b9f760 165 Pfam PF03968 OstA-like protein 30 140 4.9E-27 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VIBNI_A2953 69ede12e096395c6cc4bb8b032b9f760 165 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 159 1.4E-44 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VIBNI_A2953 69ede12e096395c6cc4bb8b032b9f760 165 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 4 160 24.006 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VIBNI_A2953 69ede12e096395c6cc4bb8b032b9f760 165 Gene3D G3DSA:2.60.450.10 20 157 1.3E-41 T 15-10-2018 VIBNI_B2122 4cda1a1ef9543d5ffbd3eed28ac76b55 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 21 118 5.9E-20 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VIBNI_B2122 4cda1a1ef9543d5ffbd3eed28ac76b55 122 SUPERFAMILY SSF89360 20 111 7.06E-24 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_B2122 4cda1a1ef9543d5ffbd3eed28ac76b55 122 Gene3D G3DSA:2.60.300.12 20 122 1.6E-29 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_B2122 4cda1a1ef9543d5ffbd3eed28ac76b55 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 121 3.7E-28 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VIBNI_B2122 4cda1a1ef9543d5ffbd3eed28ac76b55 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 Gene3D G3DSA:1.25.40.10 256 470 8.0E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 SUPERFAMILY SSF48452 311 427 5.96E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 Pfam PF01435 Peptidase family M48 70 252 3.2E-27 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 Pfam PF14559 Tetratricopeptide repeat 354 415 3.0E-8 T 15-10-2018 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 Gene3D G3DSA:3.30.2010.10 71 148 3.4E-7 T 15-10-2018 VIBNI_A0687 b3f8455190c0b9c4c0bfd54770ab93b7 485 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 483 38.364 T 15-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 SMART SM00382 28 211 9.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 Gene3D G3DSA:3.40.50.300 1 235 4.6E-75 T 15-10-2018 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 SUPERFAMILY SSF52540 4 240 1.26E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 Gene3D G3DSA:2.40.50.100 267 357 7.7E-7 T 15-10-2018 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 Pfam PF00005 ABC transporter 19 161 1.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 Gene3D G3DSA:2.40.50.140 276 344 7.7E-7 T 15-10-2018 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 Pfam PF08402 TOBE domain 274 351 1.8E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1725 3c3108bd8c938990f9a685b5d2168e6a 361 SUPERFAMILY SSF50331 250 359 7.37E-10 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 SUPERFAMILY SSF118215 5 406 3.14E-104 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 Gene3D G3DSA:1.10.3860.10 1 417 5.6E-112 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 9.2E-38 T 15-10-2018 VIBNI_A2724 b20522bf996eaf386de6e39d0cafc351 421 Pfam PF00375 Sodium:dicarboxylate symporter family 5 404 3.2E-113 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 327 4.1E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Gene3D G3DSA:3.40.50.2300 499 634 2.3E-17 T 15-10-2018 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 1.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 1.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SMART SM00388 262 327 5.4E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SMART SM00448 505 619 3.3E-11 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Pfam PF00072 Response regulator receiver domain 507 619 9.1E-10 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SMART SM00387 371 482 1.6E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Gene3D G3DSA:1.10.287.130 225 325 5.1E-12 T 15-10-2018 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SUPERFAMILY SSF47384 248 328 1.22E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Gene3D G3DSA:3.30.565.10 330 480 6.1E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 480 1.4E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SUPERFAMILY SSF55874 318 480 2.36E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1325 4e031b69ca5f45615b2a303ebd07870a 639 SUPERFAMILY SSF52172 504 627 4.13E-17 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 Pfam PF12838 4Fe-4S dicluster domain 190 236 8.8E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 Pfam PF13187 4Fe-4S dicluster domain 424 470 3.8E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 SUPERFAMILY SSF54862 147 509 1.55E-35 T 15-10-2018 VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 456 467 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 Gene3D G3DSA:3.30.70.20 420 522 7.9E-12 T 15-10-2018 VIBNI_A1713 53f3cd1e30870c5961ad5b521b3d486b 558 Gene3D G3DSA:3.30.70.20 163 259 1.7E-11 T 15-10-2018 VIBNI_A0593 8c802ce4092b02c23d459682708f39d0 160 SUPERFAMILY SSF54534 85 158 2.09E-7 T 15-10-2018 VIBNI_A0880 f4e2c8cf51fc911ad2fe82005172f134 598 SUPERFAMILY SSF53649 254 563 2.09E-47 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A0880 f4e2c8cf51fc911ad2fe82005172f134 598 PIRSF PIRSF004950 6 597 1.3E-228 T 15-10-2018 IPR012159 Inner membrane protein YejM VIBNI_A0880 f4e2c8cf51fc911ad2fe82005172f134 598 Pfam PF00884 Sulfatase 258 513 7.3E-24 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_A0880 f4e2c8cf51fc911ad2fe82005172f134 598 Gene3D G3DSA:3.40.720.10 247 543 1.1E-38 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A0880 f4e2c8cf51fc911ad2fe82005172f134 598 Pfam PF11893 Domain of unknown function (DUF3413) 6 249 3.2E-100 T 15-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 SUPERFAMILY SSF53067 223 456 2.07E-22 T 15-10-2018 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 Pfam PF12531 DNA-K related protein 687 934 5.4E-101 T 15-10-2018 IPR021030 Protein of unknown function DUF3731 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 SUPERFAMILY SSF53067 6 209 3.52E-30 T 15-10-2018 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 Pfam PF00012 Hsp70 protein 83 318 8.6E-18 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.0E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.0E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1957 2e68a3dea1a10ec30ec04cff1775ba66 937 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.0E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 SMART SM00342 215 298 1.0E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 Gene3D G3DSA:3.40.50.880 1 182 2.0E-34 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 Gene3D G3DSA:1.10.10.60 249 301 4.3E-15 T 15-10-2018 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 Pfam PF01965 DJ-1/PfpI family 72 160 1.1E-9 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 Pfam PF12833 Helix-turn-helix domain 221 300 8.5E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 SUPERFAMILY SSF46689 251 300 1.25E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 Gene3D G3DSA:1.10.10.60 199 248 2.0E-11 T 15-10-2018 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 SUPERFAMILY SSF46689 200 249 8.24E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0389 665cc32d58ad2385179ede981ad90d49 302 SUPERFAMILY SSF52317 5 178 1.34E-28 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1549 8a4d5e043e7d721bc1671a03705958b3 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 7.1E-36 T 15-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VIBNI_B1549 8a4d5e043e7d721bc1671a03705958b3 93 SUPERFAMILY SSF51182 1 93 1.59E-35 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1549 8a4d5e043e7d721bc1671a03705958b3 93 Gene3D G3DSA:2.60.120.10 1 93 1.0E-35 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1549 8a4d5e043e7d721bc1671a03705958b3 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.696 T 15-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VIBNI_B2108 158be3e762842b751db6217a974046c7 279 PIRSF PIRSF038992 1 279 1.4E-69 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_B2108 158be3e762842b751db6217a974046c7 279 SUPERFAMILY SSF51569 5 266 1.65E-57 T 15-10-2018 VIBNI_B2108 158be3e762842b751db6217a974046c7 279 SMART SM01133 18 250 1.9E-13 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_B2108 158be3e762842b751db6217a974046c7 279 Pfam PF01791 DeoC/LacD family aldolase 19 250 1.9E-45 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_B2108 158be3e762842b751db6217a974046c7 279 Gene3D G3DSA:3.20.20.70 2 279 2.2E-60 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SUPERFAMILY SSF47384 455 530 2.94E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SMART SM00091 310 377 8.4E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PIRSF PIRSF036431 228 329 3.1E-6 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PIRSF PIRSF036431 313 697 6.5E-95 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PIRSF PIRSF036431 1 219 2.0E-27 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SMART SM00387 574 697 1.9E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Gene3D G3DSA:3.30.565.10 537 697 9.5E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SUPERFAMILY SSF55785 295 424 4.71E-15 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Gene3D G3DSA:3.30.450.20 299 428 4.1E-15 T 15-10-2018 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SMART SM00388 466 534 0.002 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Gene3D G3DSA:1.10.287.130 429 529 1.9E-15 T 15-10-2018 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 SUPERFAMILY SSF55874 529 674 2.36E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Gene3D G3DSA:3.30.450.20 57 172 1.9E-7 T 15-10-2018 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 696 9.0E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Pfam PF13426 PAS domain 321 424 5.6E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 433 7.3E-15 T 15-10-2018 IPR000014 PAS domain VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 Pfam PF00512 His Kinase A (phospho-acceptor) domain 466 529 3.9E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 6.3E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 6.3E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1499 44e653648fbfb5a3681947ef1698f7b3 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 6.3E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-68 T 15-10-2018 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 SUPERFAMILY SSF55194 2 185 6.41E-72 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.789 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 5.7E-77 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 Gene3D G3DSA:1.10.132.20 11 182 2.3E-68 T 15-10-2018 VIBNI_A2501 235c244237c16c743374e287f5e52f42 185 Pfam PF01765 Ribosome recycling factor 20 183 2.0E-63 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VIBNI_B1031 63ac361e955c059f16d7961544aec33d 226 SUPERFAMILY SSF103088 101 221 5.23E-29 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B1031 63ac361e955c059f16d7961544aec33d 226 Pfam PF00691 OmpA family 122 216 2.6E-15 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_B1031 63ac361e955c059f16d7961544aec33d 226 Gene3D G3DSA:3.30.1330.60 87 225 4.4E-29 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 613 751 2.9E-47 T 15-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.2E-44 T 15-10-2018 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Gene3D G3DSA:1.20.272.10 242 361 2.7E-39 T 15-10-2018 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 536 611 1.0E-14 T 15-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Gene3D G3DSA:3.30.300.150 611 736 4.7E-42 T 15-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 4.8E-34 T 15-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 6.9E-133 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 SMART SM00382 37 179 9.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 SUPERFAMILY SSF48019 243 363 6.63E-32 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 SUPERFAMILY SSF52540 33 223 1.43E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Gene3D G3DSA:3.40.50.300 13 177 2.7E-101 T 15-10-2018 VIBNI_A0815 151f38e95112741d6a73db89b9a67792 754 Gene3D G3DSA:1.10.8.60 8 240 2.7E-101 T 15-10-2018 VIBNI_A0789 7dbac47c6a6e351bea42b782e0f11a2d 329 Gene3D G3DSA:3.40.50.2300 141 281 1.3E-77 T 15-10-2018 VIBNI_A0789 7dbac47c6a6e351bea42b782e0f11a2d 329 SUPERFAMILY SSF53822 33 315 1.2E-70 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0789 7dbac47c6a6e351bea42b782e0f11a2d 329 Pfam PF13407 Periplasmic binding protein domain 34 299 3.2E-57 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A0789 7dbac47c6a6e351bea42b782e0f11a2d 329 Gene3D G3DSA:3.40.50.2300 38 293 1.3E-77 T 15-10-2018 VIBNI_B0704 2fc65fc7f080b9071ebfdce29678eccc 580 PIRSF PIRSF014753 1 579 1.5E-140 T 15-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VIBNI_B0704 2fc65fc7f080b9071ebfdce29678eccc 580 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 47 356 2.9E-89 T 15-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VIBNI_B1065 2e0fe54865a8872fd2df0171b129a1bb 452 Pfam PF01547 Bacterial extracellular solute-binding protein 51 353 6.6E-27 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1065 2e0fe54865a8872fd2df0171b129a1bb 452 SUPERFAMILY SSF53850 37 438 2.17E-56 T 15-10-2018 VIBNI_B1065 2e0fe54865a8872fd2df0171b129a1bb 452 Gene3D G3DSA:3.40.190.10 54 389 3.9E-73 T 15-10-2018 VIBNI_B1065 2e0fe54865a8872fd2df0171b129a1bb 452 Gene3D G3DSA:3.40.190.10 159 427 3.9E-73 T 15-10-2018 VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 Pfam PF04545 Sigma-70, region 4 148 196 6.2E-13 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 Pfam PF04542 Sigma-70 region 2 45 108 1.8E-12 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 SUPERFAMILY SSF88946 18 125 1.18E-22 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 Gene3D G3DSA:1.10.10.10 114 199 3.0E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 SUPERFAMILY SSF88659 136 199 2.06E-13 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 197 1.6E-24 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0558 e41977c79a730bb401562c06e2ed2493 203 Gene3D G3DSA:1.10.1740.10 23 105 3.9E-23 T 15-10-2018 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 SUPERFAMILY SSF53335 8 265 4.18E-79 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.9E-79 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 SMART SM00650 25 197 4.0E-88 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 Gene3D G3DSA:3.40.50.150 1 197 3.6E-65 T 15-10-2018 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 Gene3D G3DSA:1.10.8.100 200 267 1.0E-24 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.1 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VIBNI_A2918 adbe753181f2e579de11ad584ed88113 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.5E-88 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Pfam PF00176 SNF2 family N-terminal domain 174 364 3.2E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 7.9E-145 T 15-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 SUPERFAMILY SSF52540 273 653 1.72E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:3.40.50.300 431 630 1.5E-47 T 15-10-2018 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 SMART SM00487 150 342 2.4E-14 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:2.30.30.140 1 53 7.1E-24 T 15-10-2018 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 2.4E-15 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:3.40.50.10810 631 713 1.9E-6 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:3.40.50.10810 150 430 1.6E-104 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:3.30.360.80 714 786 4.9E-30 T 15-10-2018 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 SMART SM00490 519 603 1.3E-17 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.046 T 15-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 Gene3D G3DSA:2.30.30.930 55 114 1.8E-26 T 15-10-2018 VIBNI_A2937 0f73f405cbf934450fbd33b7dd069bac 969 SUPERFAMILY SSF52540 120 377 3.63E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 1.5E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 1.5E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 Pfam PF12833 Helix-turn-helix domain 29 107 4.6E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 Gene3D G3DSA:1.10.10.60 4 56 8.1E-16 T 15-10-2018 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 Pfam PF06445 GyrI-like small molecule binding domain 132 264 1.7E-22 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 SUPERFAMILY SSF46689 7 57 1.25E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 Gene3D G3DSA:3.20.80.10 131 286 1.7E-30 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 SMART SM00342 23 106 4.8E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 SMART SM00871 130 285 1.1E-23 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 SUPERFAMILY SSF46689 59 110 6.27E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 SUPERFAMILY SSF55136 132 284 8.02E-26 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0669 bef7c3d647c8de04e7daeed0f236e778 288 Gene3D G3DSA:1.10.10.60 57 111 2.9E-16 T 15-10-2018 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 Pfam PF00072 Response regulator receiver domain 6 114 3.8E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 SUPERFAMILY SSF46894 137 228 3.4E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 Gene3D G3DSA:1.10.10.10 123 230 1.4E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 SMART SM00862 151 227 5.3E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 9.5E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-33 T 15-10-2018 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 SMART SM00448 4 114 4.1E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0196 a02d38eba6a01b0dbb0ded7cf0c7ccb9 230 SUPERFAMILY SSF52172 1 131 3.84E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B2155 ea1df663f202190ff1f1cf5f7c0514a6 292 Gene3D G3DSA:3.40.50.1980 17 124 7.0E-30 T 15-10-2018 VIBNI_B2155 ea1df663f202190ff1f1cf5f7c0514a6 292 Pfam PF01497 Periplasmic binding protein 39 269 8.4E-29 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_B2155 ea1df663f202190ff1f1cf5f7c0514a6 292 SUPERFAMILY SSF53807 34 291 7.46E-58 T 15-10-2018 VIBNI_B2155 ea1df663f202190ff1f1cf5f7c0514a6 292 Gene3D G3DSA:3.40.50.1980 126 292 3.2E-42 T 15-10-2018 VIBNI_A0368 2b024bc31cba41a3f956cba447e09cec 118 Pfam PF10973 Protein of unknown function (DUF2799) 30 110 3.7E-22 T 15-10-2018 IPR021242 Protein of unknown function DUF2799 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Gene3D G3DSA:3.30.300.180 2 113 4.4E-40 T 15-10-2018 IPR038454 DnaA, N-terminal domain superfamily VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 15-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Gene3D G3DSA:1.10.1750.10 373 466 2.7E-39 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Pfam PF11638 DnaA N-terminal domain 4 63 2.4E-19 T 15-10-2018 IPR024633 DnaA N-terminal domain VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 3.6E-32 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 SUPERFAMILY SSF52540 132 342 1.11E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 SMART SM00760 374 443 9.0E-45 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 SMART SM00382 163 376 4.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 SUPERFAMILY SSF48295 362 465 7.85E-38 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Gene3D G3DSA:3.40.50.300 116 295 6.1E-49 T 15-10-2018 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Pfam PF00308 Bacterial dnaA protein 132 348 1.6E-97 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Gene3D G3DSA:1.10.8.60 297 367 1.6E-24 T 15-10-2018 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 3.2E-186 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VIBNI_A0001 8f5ac8c5f141532a6c84dcc5811b19fb 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 34.308 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VIBNI_B1719 74eab5c065e9e952b316be550a7e99ad 569 Gene3D G3DSA:3.40.190.10 83 462 3.7E-46 T 15-10-2018 VIBNI_B1719 74eab5c065e9e952b316be550a7e99ad 569 Pfam PF13416 Bacterial extracellular solute-binding protein 84 438 1.3E-8 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1719 74eab5c065e9e952b316be550a7e99ad 569 SUPERFAMILY SSF53850 65 514 1.98E-62 T 15-10-2018 VIBNI_B1719 74eab5c065e9e952b316be550a7e99ad 569 PIRSF PIRSF035859 2 569 2.2E-299 T 15-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 VIBNI_B1719 74eab5c065e9e952b316be550a7e99ad 569 Gene3D G3DSA:3.40.190.10 186 504 3.7E-46 T 15-10-2018 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Gene3D G3DSA:2.60.40.1930 331 433 2.0E-7 T 15-10-2018 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Pfam PF00207 Alpha-2-macroglobulin family 912 989 2.8E-8 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 SMART SM01359 691 838 1.1E-20 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Pfam PF01835 MG2 domain 332 428 5.5E-12 T 15-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1127 1145 1.3E-4 T 15-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 SMART SM01360 903 991 2.6E-16 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 691 838 1.5E-8 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 Gene3D G3DSA:1.50.10.20 1119 1384 2.4E-19 T 15-10-2018 VIBNI_A3629 479ab6a1e923b033f9ecc8e819f2e23e 1592 SUPERFAMILY SSF48239 1125 1379 6.28E-24 T 15-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 Gene3D G3DSA:3.40.50.720 6 259 2.1E-108 T 15-10-2018 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 SUPERFAMILY SSF51735 123 280 1.71E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.134 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 Gene3D G3DSA:3.40.50.10860 8 276 2.1E-108 T 15-10-2018 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 3.4E-39 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.8E-89 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.8E-68 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VIBNI_A2454 3125363aa393d17b50e8ea60a56db37d 284 SUPERFAMILY SSF53223 1 122 7.77E-40 T 15-10-2018 VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 SUPERFAMILY SSF48498 76 182 1.78E-10 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 SUPERFAMILY SSF46689 4 80 6.74E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 Gene3D G3DSA:1.10.357.10 2 189 4.2E-54 T 15-10-2018 VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.1E-15 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.0E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0779 eefeff08e70518a9c65bb42cdd26ceef 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.0E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 608 5.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SMART SM00448 623 727 0.0046 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SMART SM00448 751 861 1.1E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SUPERFAMILY SSF55874 442 609 3.14E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF07696 7TMR-DISM extracellular 2 16 149 2.3E-26 T 15-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SMART SM00387 500 612 2.3E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SUPERFAMILY SSF47384 383 454 1.35E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:3.30.565.10 454 614 1.4E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF07695 7TM diverse intracellular signalling 160 364 1.7E-41 T 15-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:2.60.40.2380 12 156 2.2E-32 T 15-10-2018 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:1.10.287.130 359 451 1.8E-17 T 15-10-2018 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF01627 Hpt domain 914 994 1.4E-5 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:3.40.50.2300 751 867 1.7E-27 T 15-10-2018 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 6.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 6.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 555 6.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 590 6.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:1.20.120.160 893 998 9.7E-8 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF00512 His Kinase A (phospho-acceptor) domain 390 452 3.1E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SMART SM00388 388 453 2.7E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SUPERFAMILY SSF52172 616 734 5.55E-12 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SUPERFAMILY SSF52172 749 865 1.42E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 SUPERFAMILY SSF47226 889 988 1.31E-9 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Pfam PF00072 Response regulator receiver domain 753 861 5.9E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2757 cf5bf6d169196217f2059700bcf2674a 1003 Gene3D G3DSA:3.40.50.2300 617 733 5.8E-8 T 15-10-2018 VIBNI_A2434 d7c25310a94682fc3eb6ba108c16d988 165 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 152 4.1E-27 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A3444 5e4343960a6c7352b86476488e2cdf95 525 Pfam PF06527 TniQ 4 150 1.4E-14 T 15-10-2018 IPR009492 TniQ VIBNI_A3444 5e4343960a6c7352b86476488e2cdf95 525 Pfam PF15978 Tn7-like transposition protein D 203 515 1.3E-27 T 15-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl VIBNI_A2022 5e4343960a6c7352b86476488e2cdf95 525 Pfam PF06527 TniQ 4 150 1.4E-14 T 15-10-2018 IPR009492 TniQ VIBNI_A2022 5e4343960a6c7352b86476488e2cdf95 525 Pfam PF15978 Tn7-like transposition protein D 203 515 1.3E-27 T 15-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl VIBNI_A0899 2dcfcb0883fc287193d23a835154aff1 509 Gene3D G3DSA:3.10.105.10 252 479 4.6E-97 T 15-10-2018 VIBNI_A0899 2dcfcb0883fc287193d23a835154aff1 509 SUPERFAMILY SSF53850 47 500 1.49E-101 T 15-10-2018 VIBNI_A0899 2dcfcb0883fc287193d23a835154aff1 509 Gene3D G3DSA:3.40.190.10 58 491 4.6E-97 T 15-10-2018 VIBNI_A0899 2dcfcb0883fc287193d23a835154aff1 509 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 415 2.3E-69 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A0899 2dcfcb0883fc287193d23a835154aff1 509 PIRSF PIRSF002741 22 508 3.3E-73 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A0833 468f48296e573d13cb8d3f1d23a62906 272 SUPERFAMILY SSF53335 4 256 1.39E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0833 468f48296e573d13cb8d3f1d23a62906 272 Gene3D G3DSA:3.40.50.150 1 272 4.6E-81 T 15-10-2018 VIBNI_A0833 468f48296e573d13cb8d3f1d23a62906 272 Pfam PF13847 Methyltransferase domain 85 223 9.0E-14 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_A0833 468f48296e573d13cb8d3f1d23a62906 272 PIRSF PIRSF018249 1 272 4.5E-86 T 15-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VIBNI_B0657 f16bab21441dba506977df0db9509c72 323 Gene3D G3DSA:3.40.50.2300 33 285 1.2E-57 T 15-10-2018 VIBNI_B0657 f16bab21441dba506977df0db9509c72 323 Gene3D G3DSA:3.40.50.2300 134 276 1.2E-57 T 15-10-2018 VIBNI_B0657 f16bab21441dba506977df0db9509c72 323 Pfam PF13407 Periplasmic binding protein domain 33 289 2.8E-35 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0657 f16bab21441dba506977df0db9509c72 323 SUPERFAMILY SSF53822 26 314 2.14E-36 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 Gene3D G3DSA:2.40.320.10 1 199 2.0E-38 T 15-10-2018 VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 SMART SM01118 2 203 3.8E-41 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 SUPERFAMILY SSF55154 1 219 3.27E-52 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 Pfam PF05235 CHAD domain 231 396 2.1E-6 T 15-10-2018 IPR007899 CHAD domain VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 Gene3D G3DSA:1.40.20.10 213 411 4.3E-10 T 15-10-2018 IPR038186 CHAD domain superfamily VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 Pfam PF01928 CYTH domain 3 197 2.9E-33 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VIBNI_A0192 deb1653c251e6655330ea4090c137a2d 504 SMART SM00880 229 497 1.9E-15 T 15-10-2018 IPR007899 CHAD domain VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 Pfam PF06165 Glycosyltransferase family 36 21 267 1.1E-85 T 15-10-2018 IPR010383 Glycosyl hydrolase 94 VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 Gene3D G3DSA:1.50.10.10 311 721 1.1E-133 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 SUPERFAMILY SSF74650 1 269 1.98E-84 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 Gene3D G3DSA:2.70.98.40 1 302 1.1E-117 T 15-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 2.6E-207 T 15-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 SUPERFAMILY SSF48208 274 800 5.88E-109 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 Gene3D G3DSA:2.60.420.10 722 801 5.6E-31 T 15-10-2018 VIBNI_A2830 bc714705efb7515bebad0b3da8b3cdc8 801 SMART SM01068 1 63 1.2E-20 T 15-10-2018 IPR009342 Putative carbohydrate binding domain VIBNI_B0806 ab2e6a34d2b040d313b28b293510afea 139 Gene3D G3DSA:2.170.150.70 6 115 3.8E-13 T 15-10-2018 VIBNI_B0806 ab2e6a34d2b040d313b28b293510afea 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 111 6.3E-13 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_B0806 ab2e6a34d2b040d313b28b293510afea 139 SUPERFAMILY SSF51316 5 122 4.71E-32 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 SUPERFAMILY SSF51998 4 757 2.23E-286 T 15-10-2018 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 Pfam PF01228 Glycine radical 628 739 3.9E-43 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 9.9E-204 T 15-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 PIRSF PIRSF000379 5 758 0.0 T 15-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 15-10-2018 VIBNI_A1095 8a3aedb5b9f24425e3d76c37aab1780f 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VIBNI_A0048 433479eaf2cfe0acd98dfc1d4afc9dcb 306 SUPERFAMILY SSF56601 5 306 2.82E-115 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A0048 433479eaf2cfe0acd98dfc1d4afc9dcb 306 Pfam PF04960 Glutaminase 22 306 1.4E-113 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VIBNI_A0048 433479eaf2cfe0acd98dfc1d4afc9dcb 306 Gene3D G3DSA:3.40.710.10 2 306 7.5E-111 T 15-10-2018 VIBNI_A0048 433479eaf2cfe0acd98dfc1d4afc9dcb 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.9E-130 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VIBNI_A0048 433479eaf2cfe0acd98dfc1d4afc9dcb 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.363 T 15-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 SMART SM00862 140 211 1.0E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 SMART SM00448 2 110 3.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 SUPERFAMILY SSF46894 117 212 2.01E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 6.1E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 Gene3D G3DSA:1.10.10.10 119 214 4.4E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 Gene3D G3DSA:3.40.50.2300 1 118 2.7E-24 T 15-10-2018 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 Pfam PF00072 Response regulator receiver domain 5 110 9.3E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0147 877da4f43e2690c4834277e215e87871 216 SUPERFAMILY SSF52172 2 169 3.13E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 Gene3D G3DSA:3.30.9.50 80 270 3.2E-119 T 15-10-2018 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 9.5E-20 T 15-10-2018 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 9.5E-20 T 15-10-2018 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 9.5E-20 T 15-10-2018 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.5E-20 T 15-10-2018 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 Gene3D G3DSA:3.50.50.60 6 339 3.2E-119 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 5.1E-134 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 Pfam PF01494 FAD binding domain 6 320 1.9E-27 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 VIBNI_A0098 37315ccdb74475562f1bb21c4bb5dfe6 404 SUPERFAMILY SSF51905 5 384 1.3E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 Gene3D G3DSA:3.40.50.920 182 314 1.3E-30 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 SUPERFAMILY SSF52518 15 173 6.31E-34 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 Gene3D G3DSA:3.40.50.970 5 176 1.0E-41 T 15-10-2018 VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 SMART SM00861 6 171 3.5E-27 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 Pfam PF02780 Transketolase, C-terminal domain 182 304 7.2E-25 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 Pfam PF02779 Transketolase, pyrimidine binding domain 14 167 1.2E-18 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0677 2094b874f0de7e5d2665f7f9cd6b6c5d 314 SUPERFAMILY SSF52922 176 312 1.24E-29 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 SUPERFAMILY SSF46600 625 671 2.35E-11 T 15-10-2018 IPR036876 UVR domain superfamily VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 SMART SM00490 461 547 2.9E-19 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.824 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Pfam PF00271 Helicase conserved C-terminal domain 437 545 6.2E-18 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 SUPERFAMILY SSF52540 4 416 2.92E-137 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 1.5E-20 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 SMART SM00487 9 427 4.8E-26 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Gene3D G3DSA:3.40.50.300 1 233 9.3E-72 T 15-10-2018 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Gene3D G3DSA:3.40.50.300 416 597 2.0E-51 T 15-10-2018 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 129 4.5E-8 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Pfam PF02151 UvrB/uvrC motif 636 671 8.8E-8 T 15-10-2018 IPR001943 UVR domain GO:0005515 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Gene3D G3DSA:3.40.50.300 272 415 8.7E-50 T 15-10-2018 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 Gene3D G3DSA:4.10.860.10 617 676 8.7E-20 T 15-10-2018 VIBNI_A0912 86b7ee8005a458f68bd231faceffd995 676 SUPERFAMILY SSF52540 37 578 2.77E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1957 45c0bc1624845b30aa7c8fe6ec7d5ae8 306 Pfam PF13280 WYL domain 127 248 4.6E-7 T 15-10-2018 IPR026881 WYL domain VIBNI_B1957 45c0bc1624845b30aa7c8fe6ec7d5ae8 306 PIRSF PIRSF015558 3 304 7.4E-72 T 15-10-2018 IPR016634 WYL domain protein, s026 type VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 Gene3D G3DSA:2.60.120.10 23 116 4.8E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 Gene3D G3DSA:1.10.10.60 244 298 4.0E-17 T 15-10-2018 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 Pfam PF12833 Helix-turn-helix domain 218 295 1.6E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 Gene3D G3DSA:1.10.10.60 193 243 1.6E-11 T 15-10-2018 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 SMART SM00342 211 294 2.2E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 SUPERFAMILY SSF46689 247 296 2.54E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 SUPERFAMILY SSF51215 34 111 2.62E-11 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 2.6E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 2.6E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 SUPERFAMILY SSF46689 194 245 7.89E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 Pfam PF02311 AraC-like ligand binding domain 31 116 1.1E-6 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_A1689 daa677a27f6bcab334a3a0f1e11f01e2 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 Gene3D G3DSA:3.40.50.720 140 264 7.9E-31 T 15-10-2018 VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 Gene3D G3DSA:3.40.50.720 278 613 1.3E-112 T 15-10-2018 VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 Pfam PF13727 CoA-binding domain 69 238 9.8E-11 T 15-10-2018 VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 SUPERFAMILY SSF51735 281 542 4.96E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 SUPERFAMILY SSF51735 144 268 2.52E-17 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3653 28c2c2fbb86f7e882cfb3975e01403de 649 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 1.5E-127 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 281 2.3E-80 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 SUPERFAMILY SSF53335 5 280 1.35E-57 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 Gene3D G3DSA:1.10.8.10 3 88 5.9E-25 T 15-10-2018 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 Gene3D G3DSA:3.40.50.150 89 281 9.9E-59 T 15-10-2018 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 43.811 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 2.9E-90 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VIBNI_A2679 903834094dcf8eeff311b091c5a149e0 282 Pfam PF13847 Methyltransferase domain 116 252 1.2E-17 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 SUPERFAMILY SSF53383 115 457 4.96E-74 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 Gene3D G3DSA:3.40.640.10 134 352 4.9E-71 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 Pfam PF00155 Aminotransferase class I and II 118 444 1.0E-31 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 SMART SM00345 7 66 9.5E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.1E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 SUPERFAMILY SSF46785 2 74 5.77E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 Gene3D G3DSA:1.10.10.10 1 77 2.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1458 2e986dcc45b557bae41008cb4366ff5d 460 Gene3D G3DSA:3.90.1150.10 112 455 4.9E-71 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 SUPERFAMILY SSF53901 229 426 1.76E-65 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 SUPERFAMILY SSF53901 1 266 1.06E-47 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 Gene3D G3DSA:3.40.47.10 271 415 8.3E-46 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 383 3.3E-34 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 171 187 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 Gene3D G3DSA:3.40.47.10 1 269 2.8E-58 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 SMART SM00825 Beta-ketoacyl synthase 4 428 6.1E-14 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A1157 868b1a2db7a44b2a3123c0f6824c86c0 430 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 261 5.0E-36 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 Gene3D G3DSA:3.90.1170.10 1 136 2.1E-53 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 SUPERFAMILY SSF54686 3 133 6.67E-53 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.566 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.9E-46 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.1E-58 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.3E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.3E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.3E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3171 37398b5a19f6f1a0acf90d17e5f88c03 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.3E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 Pfam PF01380 SIS domain 142 267 1.0E-20 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 SUPERFAMILY SSF53697 113 268 4.45E-27 T 15-10-2018 VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 Gene3D G3DSA:1.10.10.10 5 82 2.8E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 SUPERFAMILY SSF46689 9 84 6.63E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 Gene3D G3DSA:3.40.50.10490 110 272 2.2E-33 T 15-10-2018 VIBNI_A2173 9a54a2bb8d6419d210ede04065345123 272 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 74 2.0E-10 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 SUPERFAMILY SSF53383 11 343 6.8E-73 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 Gene3D G3DSA:3.40.640.10 49 253 2.8E-122 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.666 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 4.9E-120 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 Pfam PF00155 Aminotransferase class I and II 42 340 9.7E-57 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 Gene3D G3DSA:3.90.1150.10 4 336 2.8E-122 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2290 e22aab7f25d1fdf44df3b38b012de0db 350 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 SUPERFAMILY SSF46785 3 109 8.16E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.4E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 Gene3D G3DSA:1.10.10.10 1 87 1.9E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 SUPERFAMILY SSF53850 88 293 9.17E-36 T 15-10-2018 VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 Pfam PF03466 LysR substrate binding domain 87 293 4.3E-34 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0468 1303d9e184f3b09eb31909837e0c2f62 293 Gene3D G3DSA:3.40.190.290 89 293 2.4E-48 T 15-10-2018 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SMART SM00465 17 98 1.1E-23 T 15-10-2018 IPR000305 GIY-YIG endonuclease VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SUPERFAMILY SSF47781 525 609 3.5E-18 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SUPERFAMILY SSF82771 17 100 1.83E-24 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SMART SM00278 556 575 0.24 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SMART SM00278 588 607 18.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.336 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 8.0E-10 T 15-10-2018 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Gene3D G3DSA:3.30.420.340 379 552 1.4E-45 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.7E-13 T 15-10-2018 IPR000305 GIY-YIG endonuclease VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Gene3D G3DSA:3.40.1440.10 6 102 1.3E-31 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Gene3D G3DSA:1.10.150.20 555 610 3.4E-24 T 15-10-2018 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 SUPERFAMILY SSF46600 190 243 2.35E-13 T 15-10-2018 IPR036876 UVR domain superfamily VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 9.9E-214 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Pfam PF02151 UvrB/uvrC motif 204 238 2.1E-8 T 15-10-2018 IPR001943 UVR domain GO:0005515 VIBNI_A1307 e207bd0b48e00a4a8bd69896340bb15c 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 388 542 7.5E-44 T 15-10-2018 IPR001162 UvrC family homology region VIBNI_B0990 e45889a8584ff975b6ed5ae0fc122fbf 456 Pfam PF01554 MatE 17 176 2.4E-34 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0990 e45889a8584ff975b6ed5ae0fc122fbf 456 Pfam PF01554 MatE 243 403 2.3E-33 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0990 e45889a8584ff975b6ed5ae0fc122fbf 456 PIRSF PIRSF006603 4 455 1.5E-61 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0990 e45889a8584ff975b6ed5ae0fc122fbf 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 3.7E-105 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0009 8cdb23cc37410033fc0d46635174d5ef 167 Gene3D G3DSA:2.30.30.40 26 152 5.8E-32 T 15-10-2018 VIBNI_B0009 8cdb23cc37410033fc0d46635174d5ef 167 SUPERFAMILY SSF50341 22 161 7.98E-33 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_B0009 8cdb23cc37410033fc0d46635174d5ef 167 Pfam PF01584 CheW-like domain 24 160 8.1E-31 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0009 8cdb23cc37410033fc0d46635174d5ef 167 SMART SM00260 19 158 6.5E-27 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0009 8cdb23cc37410033fc0d46635174d5ef 167 Gene3D G3DSA:2.40.50.180 42 153 5.8E-32 T 15-10-2018 VIBNI_A2868 50a62b792a0e999dcfa906d98d11656f 147 Gene3D G3DSA:1.10.1510.10 1 90 3.4E-26 T 15-10-2018 VIBNI_A2868 50a62b792a0e999dcfa906d98d11656f 147 Pfam PF09424 Yqey-like protein 5 146 1.4E-55 T 15-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VIBNI_A2868 50a62b792a0e999dcfa906d98d11656f 147 SUPERFAMILY SSF89095 1 146 1.26E-42 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VIBNI_A2868 50a62b792a0e999dcfa906d98d11656f 147 Gene3D G3DSA:1.10.10.410 91 147 5.4E-19 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Gene3D G3DSA:1.10.8.10 158 205 5.7E-21 T 15-10-2018 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Pfam PF07499 RuvA, C-terminal domain 163 204 5.4E-16 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 SMART SM00278 108 127 0.071 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 SMART SM00278 73 92 540.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Pfam PF01330 RuvA N terminal domain 2 62 1.8E-20 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 1.9E-63 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.302 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 SUPERFAMILY SSF50249 2 63 8.57E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-13 T 15-10-2018 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Gene3D G3DSA:2.40.50.140 1 65 1.5E-27 T 15-10-2018 VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 SUPERFAMILY SSF47781 66 136 1.89E-19 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 SUPERFAMILY SSF46929 159 204 2.22E-11 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily VIBNI_A2266 9618f142634182b837d5b092f8dfd9de 205 Gene3D G3DSA:1.10.150.20 67 143 2.9E-25 T 15-10-2018 VIBNI_A2985 059da5c4260f77293ea984776c781bfd 297 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 1.6E-85 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VIBNI_A2985 059da5c4260f77293ea984776c781bfd 297 PIRSF PIRSF038471 2 284 7.9E-83 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VIBNI_A2985 059da5c4260f77293ea984776c781bfd 297 Pfam PF04085 rod shape-determining protein MreC 123 269 6.5E-40 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VIBNI_A2985 059da5c4260f77293ea984776c781bfd 297 Gene3D G3DSA:2.40.10.340 122 266 8.2E-38 T 15-10-2018 VIBNI_A2985 059da5c4260f77293ea984776c781bfd 297 Gene3D G3DSA:2.40.10.350 180 257 8.2E-38 T 15-10-2018 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 Gene3D G3DSA:3.20.20.20 2 276 1.5E-114 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.1E-104 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 SUPERFAMILY SSF51717 2 274 5.63E-107 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2802 dc21ff8e95a7928e9c4ca1b020113d89 276 Pfam PF00809 Pterin binding enzyme 18 257 5.2E-92 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_B1452 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF53098 160 333 1.52E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_B1452 25d44f721d37ddb767935363dd8926fc 346 Pfam PF13551 Winged helix-turn helix 11 74 7.6E-20 T 15-10-2018 VIBNI_B1452 25d44f721d37ddb767935363dd8926fc 346 Gene3D G3DSA:3.30.420.10 161 327 2.3E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_B1452 25d44f721d37ddb767935363dd8926fc 346 Pfam PF00665 Integrase core domain 161 283 2.9E-21 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_B1452 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF46689 18 113 2.87E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0834 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF53098 160 333 1.52E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_B0834 25d44f721d37ddb767935363dd8926fc 346 Pfam PF13551 Winged helix-turn helix 11 74 7.6E-20 T 15-10-2018 VIBNI_B0834 25d44f721d37ddb767935363dd8926fc 346 Gene3D G3DSA:3.30.420.10 161 327 2.3E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_B0834 25d44f721d37ddb767935363dd8926fc 346 Pfam PF00665 Integrase core domain 161 283 2.9E-21 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_B0834 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF46689 18 113 2.87E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3019 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF53098 160 333 1.52E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A3019 25d44f721d37ddb767935363dd8926fc 346 Pfam PF13551 Winged helix-turn helix 11 74 7.6E-20 T 15-10-2018 VIBNI_A3019 25d44f721d37ddb767935363dd8926fc 346 Gene3D G3DSA:3.30.420.10 161 327 2.3E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A3019 25d44f721d37ddb767935363dd8926fc 346 Pfam PF00665 Integrase core domain 161 283 2.9E-21 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A3019 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF46689 18 113 2.87E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1072 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF53098 160 333 1.52E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_B1072 25d44f721d37ddb767935363dd8926fc 346 Pfam PF13551 Winged helix-turn helix 11 74 7.6E-20 T 15-10-2018 VIBNI_B1072 25d44f721d37ddb767935363dd8926fc 346 Gene3D G3DSA:3.30.420.10 161 327 2.3E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_B1072 25d44f721d37ddb767935363dd8926fc 346 Pfam PF00665 Integrase core domain 161 283 2.9E-21 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_B1072 25d44f721d37ddb767935363dd8926fc 346 SUPERFAMILY SSF46689 18 113 2.87E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2703 05605a6ee8d67f1345b15668085d36a2 363 Pfam PF02562 PhoH-like protein 120 323 1.5E-93 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 VIBNI_A2703 05605a6ee8d67f1345b15668085d36a2 363 Gene3D G3DSA:3.40.50.300 117 323 8.2E-73 T 15-10-2018 VIBNI_A2703 05605a6ee8d67f1345b15668085d36a2 363 SUPERFAMILY SSF52540 119 321 5.0E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 SUPERFAMILY SSF57783 66 101 3.66E-13 T 15-10-2018 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 154 180 2.7 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 5.5E-15 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 57 2.5E-14 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 102 1.6E-16 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 SUPERFAMILY SSF57783 16 64 7.65E-14 T 15-10-2018 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Gene3D G3DSA:3.30.65.10 62 101 5.1E-9 T 15-10-2018 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Gene3D G3DSA:3.30.65.10 9 61 2.6E-8 T 15-10-2018 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 Gene3D G3DSA:3.30.65.10 102 161 1.7E-5 T 15-10-2018 VIBNI_A3832 a45201265469ed4eeaac132208e690d3 189 SUPERFAMILY SSF57783 102 147 2.55E-6 T 15-10-2018 VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 SUPERFAMILY SSF46785 15 86 2.9E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 SUPERFAMILY SSF55781 86 257 9.16E-34 T 15-10-2018 VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 Pfam PF01614 Bacterial transcriptional regulator 140 257 4.0E-24 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 Pfam PF09339 IclR helix-turn-helix domain 17 68 1.4E-13 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 Gene3D G3DSA:3.30.450.40 89 257 3.6E-34 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 Gene3D G3DSA:1.10.10.10 2 80 9.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1907 79b5a0cadc7a495df9ba5a17aac2d7b0 264 SMART SM00346 15 105 2.4E-14 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SMART SM00482 686 893 2.9E-119 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SMART SM00474 330 517 1.4E-39 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 15-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:1.20.1060.10 543 658 1.3E-42 T 15-10-2018 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:3.30.70.370 664 925 2.1E-114 T 15-10-2018 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SUPERFAMILY SSF53098 333 518 4.98E-54 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Pfam PF01612 3'-5' exonuclease 330 514 1.7E-38 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SUPERFAMILY SSF47807 171 291 1.94E-30 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 TIGRFAM TIGR00593 pola: DNA polymerase I 9 929 1.4E-284 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SMART SM00279 173 208 2.5E-13 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:1.10.150.20 174 253 2.6E-95 T 15-10-2018 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SUPERFAMILY SSF56672 522 929 6.34E-159 T 15-10-2018 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 4.3E-54 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Pfam PF00476 DNA polymerase family A 553 926 6.0E-157 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 2.0E-29 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:3.40.50.1010 9 284 2.6E-95 T 15-10-2018 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SUPERFAMILY SSF88723 7 170 5.4E-58 T 15-10-2018 IPR029060 PIN-like domain superfamily VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 SMART SM00475 7 268 1.3E-122 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 876 889 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-77 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:3.30.420.10 327 542 1.2E-66 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A3404 c6d2fa1dbf43d628dc60883f7608b802 929 Gene3D G3DSA:1.10.150.20 709 852 2.1E-114 T 15-10-2018 VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 SUPERFAMILY SSF109604 30 486 1.57E-54 T 15-10-2018 VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Pfam PF01966 HD domain 66 136 1.7E-9 T 15-10-2018 IPR006674 HD domain VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 SMART SM00471 62 263 8.7E-8 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Gene3D G3DSA:1.10.3550.10 122 480 1.5E-76 T 15-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Gene3D G3DSA:1.10.3410.10 247 373 1.5E-76 T 15-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Pfam PF13286 Phosphohydrolase-associated domain 463 485 8.3E-5 T 15-10-2018 IPR026875 Phosphohydrolase-associated domain VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Gene3D G3DSA:1.10.3210.10 31 246 1.5E-76 T 15-10-2018 VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 491 41.606 T 15-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 VIBNI_A0616 e85ca6cc0083d98caddc70c05f9db920 493 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 487 4.1E-105 T 15-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:2.40.50.100 1151 1214 7.7E-63 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 SUPERFAMILY SSF64484 16 1363 0.0 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.1790.20 1135 1313 7.7E-63 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.132.30 641 790 1.7E-65 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.274.100 564 640 3.3E-14 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.274.100 490 563 3.7E-24 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.1E-19 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.150.390 1315 1375 1.0E-28 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 485 1.1E-27 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 5.7E-8 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.3E-88 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:2.40.50.100 1022 1126 1.6E-28 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 SMART SM00663 235 514 2.1E-185 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 9.2E-78 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:2.40.50.100 948 1021 1.1E-24 T 15-10-2018 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-26 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1375 18.913 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3325 449b8146a7b1debddea34d8de2ab5e9c 1398 Gene3D G3DSA:1.10.40.90 374 416 6.5E-22 T 15-10-2018 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.1E-156 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 5.6E-32 T 15-10-2018 IPR025121 GTPase HflX, N-terminal VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Gene3D G3DSA:3.40.50.300 197 370 5.9E-42 T 15-10-2018 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 15-10-2018 IPR032305 GTP-binding protein, middle domain VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.9E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Gene3D G3DSA:3.40.50.11060 18 138 1.6E-38 T 15-10-2018 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 SUPERFAMILY SSF54980 364 428 7.19E-17 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 SUPERFAMILY SSF52540 197 374 1.69E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.699 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 PIRSF PIRSF006809 3 422 4.5E-152 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A3217 ae07bdc1b971ad0f6553745fd8d6413e 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_B1606 ad083f4ddc3b4cdf1dca60f0a557fbc1 417 Pfam PF04932 O-Antigen ligase 198 342 7.4E-8 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 SUPERFAMILY SSF55594 7 91 1.44E-26 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 Pfam PF00381 PTS HPr component phosphorylation site 7 85 2.7E-25 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 PRINTS PR00107 Phosphocarrier protein signature 16 32 9.6E-12 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 9.6E-12 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 9.6E-12 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 Gene3D G3DSA:3.30.1340.10 6 91 2.4E-28 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 7 85 9.9E-24 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2947 23d4209878ef275b456dc90f1d6bb0ec 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 16 23 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 SMART SM00279 167 202 3.2E-8 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.014 T 15-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 SMART SM00475 3 254 6.8E-57 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 148 9.5E-31 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 SUPERFAMILY SSF47807 164 254 3.29E-17 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 Gene3D G3DSA:3.40.50.1010 1 166 3.4E-51 T 15-10-2018 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 SUPERFAMILY SSF88723 4 164 3.92E-39 T 15-10-2018 IPR029060 PIN-like domain superfamily VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 254 1.3E-19 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VIBNI_A2522 fc3c6a0bd936a84fe7fa5494aca7cd8a 256 Gene3D G3DSA:1.10.150.20 167 255 1.1E-18 T 15-10-2018 VIBNI_A0612 a4f664c15c0814e3babbb710b277e359 331 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 175 2.1E-11 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_A0612 a4f664c15c0814e3babbb710b277e359 331 SUPERFAMILY SSF53901 3 329 2.45E-33 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0612 a4f664c15c0814e3babbb710b277e359 331 Gene3D G3DSA:3.40.47.10 1 331 7.0E-72 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0612 a4f664c15c0814e3babbb710b277e359 331 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 330 5.9E-19 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SUPERFAMILY SSF55729 739 881 7.89E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.30.1490.20 510 587 2.5E-57 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.30.470.20 490 701 2.5E-57 T 15-10-2018 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Pfam PF00583 Acetyltransferase (GNAT) family 771 874 2.5E-8 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.40.50.720 1 131 4.6E-34 T 15-10-2018 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.40.50.261 295 466 1.8E-52 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SUPERFAMILY SSF52210 297 457 3.53E-39 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SMART SM00881 7 102 7.0E-25 T 15-10-2018 IPR003781 CoA-binding GO:0048037 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SUPERFAMILY SSF56059 492 698 4.65E-30 T 15-10-2018 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.40.50.261 132 293 1.0E-51 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Gene3D G3DSA:3.40.630.30 728 893 2.9E-40 T 15-10-2018 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 1.1E-50 T 15-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Pfam PF13549 ATP-grasp domain 485 705 7.5E-70 T 15-10-2018 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SUPERFAMILY SSF51735 2 141 2.64E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 Pfam PF13380 CoA binding domain 12 136 1.4E-21 T 15-10-2018 IPR003781 CoA-binding GO:0048037 VIBNI_B1130 b01489ed9ee2ca580b29b33cc9c4cd00 893 SUPERFAMILY SSF52210 133 291 8.77E-38 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 SMART SM00363 20 81 9.8E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 SUPERFAMILY SSF55120 96 309 1.14E-62 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 Gene3D G3DSA:3.30.2350.10 93 315 6.2E-78 T 15-10-2018 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 9.5E-90 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 Pfam PF00849 RNA pseudouridylate synthase 102 247 1.1E-31 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 SUPERFAMILY SSF55174 19 70 1.88E-8 T 15-10-2018 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 Gene3D G3DSA:3.10.290.10 8 73 1.5E-16 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 Pfam PF01479 S4 domain 20 66 1.1E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2369 289aad5ab676a734ab1239c2460125ab 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 Pfam PF00535 Glycosyl transferase family 2 134 323 1.4E-32 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 8 723 4.4E-266 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 Gene3D G3DSA:2.40.10.220 564 660 8.3E-6 T 15-10-2018 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 58 78 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 469 488 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 86 111 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 429 448 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 140 159 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 PRINTS PR01439 Cellulose synthase subunit A signature 400 426 1.6E-23 T 15-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 Pfam PF07238 PilZ domain 568 661 6.6E-8 T 15-10-2018 IPR009875 PilZ domain GO:0035438 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 SUPERFAMILY SSF53448 133 426 9.14E-48 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 SUPERFAMILY SSF141371 565 618 1.69E-6 T 15-10-2018 VIBNI_B0368 7fa8a112ade0cade28999c1e1b0c971d 740 Gene3D G3DSA:3.90.550.10 122 360 1.3E-85 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 PIRSF PIRSF006232 2 280 1.7E-84 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 Gene3D G3DSA:2.60.120.10 17 273 2.9E-85 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 SUPERFAMILY SSF51182 5 279 1.72E-74 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 Gene3D G3DSA:2.60.120.10 142 247 2.9E-85 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 Pfam PF05726 Pirin C-terminal cupin domain 179 277 1.4E-29 T 15-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VIBNI_B0590 74b4d2017c2bb43780d414b6b9be3a2a 280 Pfam PF02678 Pirin 26 120 3.1E-34 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VIBNI_A0591 803ed477ead3e21cd44ea67f3da7d584 338 Pfam PF00535 Glycosyl transferase family 2 4 166 9.7E-27 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A0591 803ed477ead3e21cd44ea67f3da7d584 338 SUPERFAMILY SSF53448 1 253 2.89E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A0591 803ed477ead3e21cd44ea67f3da7d584 338 Gene3D G3DSA:3.90.550.10 1 202 2.3E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 Pfam PF01432 Peptidase family M3 212 581 3.1E-25 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 Pfam PF08439 Oligopeptidase F 113 179 1.5E-7 T 15-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 Gene3D G3DSA:1.10.1370.20 224 601 4.6E-110 T 15-10-2018 VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 Gene3D G3DSA:1.20.140.70 16 163 2.2E-9 T 15-10-2018 VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 SUPERFAMILY SSF55486 6 583 6.18E-91 T 15-10-2018 VIBNI_A1496 1f9c971ce2e8a2bcfea9dc7133a3c802 602 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 596 1.0E-189 T 15-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VIBNI_A0986 39a0e265cd0628c1e9987dbcf7383336 152 Pfam PF04982 HPP family 34 141 4.8E-35 T 15-10-2018 IPR007065 HPP VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 243 253 - T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Gene3D G3DSA:2.130.10.30 4 169 1.5E-40 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 310 354 1.4E-6 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 204 253 1.2E-9 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 40 90 8.7E-6 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 256 304 5.8E-9 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 148 200 2.1E-10 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 96 144 4.2E-11 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 134 144 - T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 Gene3D G3DSA:2.130.10.30 170 395 2.2E-51 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 SUPERFAMILY SSF50985 21 286 1.83E-68 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 150 164 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 303 324 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 246 264 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 96 112 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 134 150 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_B0673 5791579f4b347512f184f0aebe91e366 395 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 25 38 4.8E-15 T 15-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 Gene3D G3DSA:3.40.190.10 182 280 5.2E-56 T 15-10-2018 VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 Pfam PF03466 LysR substrate binding domain 98 307 1.8E-27 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.9E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 SUPERFAMILY SSF53850 92 307 4.51E-46 T 15-10-2018 VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 Gene3D G3DSA:1.10.10.10 2 89 1.2E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 Gene3D G3DSA:3.40.190.10 92 305 5.2E-56 T 15-10-2018 VIBNI_A3811 fa17f7b81e1e82fe231bfa8385e581fd 322 SUPERFAMILY SSF46785 8 87 1.36E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.7E-67 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 15-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 Gene3D G3DSA:1.20.1440.90 303 387 2.2E-25 T 15-10-2018 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 15-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 7.6E-287 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 SUPERFAMILY SSF51621 6 877 0.0 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A3596 6dbf985a85f15502424f1d70ba9d922f 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.87 T 15-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.036 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 SUPERFAMILY SSF50249 6 83 1.63E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 15-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 Gene3D G3DSA:2.40.50.140 1 83 8.5E-39 T 15-10-2018 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 Pfam PF00366 Ribosomal protein S17 10 77 4.1E-34 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 9.0E-37 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.3E-38 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 7.7E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 7.7E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3169 421afcf95b24326a062665a905b356ad 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 7.7E-14 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.117 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 Gene3D G3DSA:3.40.50.300 1 171 1.1E-55 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 SUPERFAMILY SSF52540 4 169 5.74E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 PRINTS PR01100 Shikimate kinase family signature 7 22 6.0E-29 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 PRINTS PR01100 Shikimate kinase family signature 98 115 6.0E-29 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 PRINTS PR01100 Shikimate kinase family signature 77 86 6.0E-29 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 PRINTS PR01100 Shikimate kinase family signature 31 44 6.0E-29 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 PRINTS PR01100 Shikimate kinase family signature 59 67 6.0E-29 T 15-10-2018 VIBNI_A3580 ad693f572e23df2c46010d1d5bb3a5bf 172 Pfam PF01202 Shikimate kinase 13 169 5.3E-56 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 160 8.4E-39 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 Gene3D G3DSA:1.10.1040.10 164 294 3.2E-39 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 Gene3D G3DSA:3.40.50.720 1 162 3.3E-44 T 15-10-2018 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 PIRSF PIRSF000103 1 294 1.4E-58 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 SUPERFAMILY SSF48179 164 287 5.67E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 6.3E-31 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VIBNI_A0441 20f543e366c2b6bb54621ed1d3dc3a34 304 SUPERFAMILY SSF51735 3 162 4.49E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Gene3D G3DSA:3.40.50.300 571 827 9.4E-101 T 15-10-2018 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 690 706 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SMART SM00533 286 593 4.2E-109 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 PIRSF PIRSF037677 2 826 7.2E-159 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 847 25.331 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Pfam PF01624 MutS domain I 11 122 9.5E-42 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Pfam PF05190 MutS family domain IV 430 520 2.6E-30 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SUPERFAMILY SSF48334 270 567 1.7E-92 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Gene3D G3DSA:3.40.1170.10 2 124 1.6E-52 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 853 0.0 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Pfam PF05192 MutS domain III 272 561 4.1E-42 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Gene3D G3DSA:1.10.1420.10 389 505 1.1E-104 T 15-10-2018 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SUPERFAMILY SSF55271 5 118 6.93E-43 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Pfam PF05188 MutS domain II 131 256 3.1E-31 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SUPERFAMILY SSF53150 117 269 9.55E-41 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SMART SM00534 609 796 3.7E-117 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Pfam PF00488 MutS domain V 612 799 2.3E-87 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Gene3D G3DSA:3.30.420.110 130 264 8.7E-36 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 Gene3D G3DSA:1.10.1420.10 269 561 1.1E-104 T 15-10-2018 VIBNI_A0139 6b595d22da723c304c97498c66225ce9 855 SUPERFAMILY SSF52540 569 800 1.06E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0343 ed6c152436c544d28498684d28db93cc 158 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 5 146 7.7E-43 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VIBNI_B0343 ed6c152436c544d28498684d28db93cc 158 Gene3D G3DSA:2.60.40.4150 24 153 1.4E-33 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VIBNI_B0343 ed6c152436c544d28498684d28db93cc 158 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 147 3.9E-40 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Gene3D G3DSA:3.40.50.300 466 677 3.3E-33 T 15-10-2018 VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Gene3D G3DSA:3.40.50.300 264 450 1.3E-27 T 15-10-2018 VIBNI_A2241 784dac72f095f86b3e694745479af209 717 SMART SM00490 578 659 5.3E-10 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Pfam PF04851 Type III restriction enzyme, res subunit 269 435 3.2E-18 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Gene3D G3DSA:3.30.870.10 10 210 2.7E-9 T 15-10-2018 VIBNI_A2241 784dac72f095f86b3e694745479af209 717 SMART SM00487 267 465 1.0E-13 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Pfam PF13091 PLD-like domain 56 176 4.4E-7 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A2241 784dac72f095f86b3e694745479af209 717 SUPERFAMILY SSF52540 322 671 8.63E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2241 784dac72f095f86b3e694745479af209 717 Pfam PF00271 Helicase conserved C-terminal domain 583 658 3.9E-13 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0865 1ce5538b20cc2f548281cb9026573765 450 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 435 7.9E-79 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0865 1ce5538b20cc2f548281cb9026573765 450 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 38 445 1.4E-88 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 42 67 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 362 380 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 393 408 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 338 356 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 162 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 417 434 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 143 9.3E-48 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 Pfam PF01019 Gamma-glutamyltranspeptidase 35 332 1.5E-62 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 Pfam PF01019 Gamma-glutamyltranspeptidase 336 483 1.1E-35 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 Gene3D G3DSA:3.60.20.40 338 503 5.7E-39 T 15-10-2018 VIBNI_B1911 aad0f27e7498d378636f4c338ba14310 521 SUPERFAMILY SSF56235 10 476 9.65E-117 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SUPERFAMILY SSF53850 291 507 3.53E-32 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Gene3D G3DSA:3.40.190.10 281 504 2.3E-50 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Gene3D G3DSA:3.40.190.10 34 263 6.9E-53 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Gene3D G3DSA:3.30.70.270 538 708 4.8E-48 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Gene3D G3DSA:3.40.190.10 374 467 2.3E-50 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 546 705 6.7E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SMART SM00062 290 508 1.4E-4 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SMART SM00062 43 267 1.2E-21 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SUPERFAMILY SSF55073 555 708 6.67E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SMART SM00267 539 707 7.1E-49 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Pfam PF00990 Diguanylate cyclase, GGDEF domain 552 703 4.5E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 293 492 2.4E-20 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 SUPERFAMILY SSF53850 48 266 1.55E-37 T 15-10-2018 VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 265 4.5E-31 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B1506 ce61c3344b1c97c0139604d764d76066 721 Gene3D G3DSA:3.40.190.10 129 226 6.9E-53 T 15-10-2018 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 Pfam PF05175 Methyltransferase small domain 201 374 1.5E-52 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 377 49.558 T 15-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 PIRSF PIRSF037565 1 378 2.8E-172 T 15-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 SUPERFAMILY SSF53335 195 355 4.8E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 Gene3D G3DSA:3.40.50.150 9 184 2.3E-50 T 15-10-2018 VIBNI_A0563 b532f52347e4ee00b67e7e1d54542f2b 378 Gene3D G3DSA:3.40.50.150 188 378 3.8E-47 T 15-10-2018 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 SUPERFAMILY SSF52540 5 255 2.88E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 SUPERFAMILY SSF52540 278 526 1.33E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Pfam PF00005 ABC transporter 26 183 7.5E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Gene3D G3DSA:3.40.50.300 3 275 7.4E-77 T 15-10-2018 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Gene3D G3DSA:3.40.50.300 276 576 3.2E-84 T 15-10-2018 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 SMART SM00382 313 512 1.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 SMART SM00382 34 234 5.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 279 0.08 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 536 1.1E-5 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1660 6aba35fca08f5b9bf1055b7a03148fc8 579 Pfam PF00005 ABC transporter 305 453 3.3E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2970 639967fa7456de607fc558bc0e6c6eb6 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 7.0E-69 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VIBNI_A2970 639967fa7456de607fc558bc0e6c6eb6 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 3.6E-124 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 Gene3D G3DSA:3.40.50.2300 61 323 8.2E-44 T 15-10-2018 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 Gene3D G3DSA:3.40.50.2300 163 308 8.2E-44 T 15-10-2018 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 SUPERFAMILY SSF53822 63 324 3.93E-37 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1186 7033547192637440da74087bbb5246e5 343 Pfam PF13377 Periplasmic binding protein-like domain 208 323 2.9E-19 T 15-10-2018 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 49 8.8E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 SMART SM00354 5 76 2.5E-7 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 SUPERFAMILY SSF47413 4 64 1.95E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1186 7033547192637440da74087bbb5246e5 343 Gene3D G3DSA:1.10.260.40 1 60 1.5E-14 T 15-10-2018 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Gene3D G3DSA:2.60.40.10 218 331 1.8E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 383 408 - T 15-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SUPERFAMILY SSF74650 742 1034 3.14E-88 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Gene3D G3DSA:2.60.120.260 6 216 9.3E-84 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Pfam PF16353 Domain of unknown function(DUF4981) 641 728 6.6E-13 T 15-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SMART SM01038 756 1033 4.4E-103 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 50 215 1.5E-55 T 15-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Pfam PF00703 Glycosyl hydrolases family 2 219 331 1.1E-11 T 15-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Pfam PF02929 Beta galactosidase small chain 758 1032 3.5E-65 T 15-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SUPERFAMILY SSF49303 623 730 1.06E-17 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SUPERFAMILY SSF49785 11 215 1.98E-63 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SUPERFAMILY SSF49303 218 331 8.63E-23 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Gene3D G3DSA:2.60.40.10 627 734 8.4E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 445 459 - T 15-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Gene3D G3DSA:2.70.98.10 742 1034 5.3E-88 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 333 630 3.1E-113 T 15-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 Gene3D G3DSA:3.20.20.80 332 626 1.9E-121 T 15-10-2018 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 356 6.3E-39 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 6.3E-39 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 533 548 6.3E-39 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 373 391 6.3E-39 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 445 460 6.3E-39 T 15-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VIBNI_B1380 00cb660c73a10572b58035e747be1464 1039 SUPERFAMILY SSF51445 333 626 1.16E-96 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 9 294 39.303 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 9 275 2.6E-109 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 Gene3D G3DSA:3.40.50.620 9 288 1.0E-104 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 1.0E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 1.0E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 1.0E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 1.0E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 1.0E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 276 4.3E-42 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 SUPERFAMILY SSF52374 9 288 1.27E-79 T 15-10-2018 VIBNI_A2848 987860b63ea8e5992d65ce10546056ba 302 Gene3D G3DSA:3.40.50.620 84 222 1.0E-104 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SUPERFAMILY SSF55021 634 704 2.52E-6 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Pfam PF13328 HD domain 28 175 1.4E-54 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Pfam PF13291 ACT domain 628 704 3.3E-13 T 15-10-2018 IPR002912 ACT domain VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.9E-34 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Gene3D G3DSA:3.30.460.10 193 325 6.2E-46 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SMART SM00471 41 153 5.9E-12 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SMART SM00954 235 345 1.5E-58 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SUPERFAMILY SSF81301 180 393 5.56E-59 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Gene3D G3DSA:3.30.70.260 628 707 1.1E-12 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Gene3D G3DSA:1.10.3210.10 3 190 2.0E-79 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SUPERFAMILY SSF109604 3 190 1.63E-74 T 15-10-2018 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 703 3.9E-271 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 SUPERFAMILY SSF81271 376 448 2.83E-20 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Pfam PF02824 TGS domain 389 447 1.5E-19 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VIBNI_A3712 aab06315623b777fe8ba3475397b000c 707 Gene3D G3DSA:3.10.20.30 382 456 3.6E-29 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Gene3D G3DSA:3.40.30.10 469 594 5.8E-33 T 15-10-2018 VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 ProSitePatterns PS00194 Thioredoxin family active site. 504 522 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Pfam PF11412 Disulphide bond corrector protein DsbC 43 151 1.9E-28 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Pfam PF13899 Thioredoxin-like 485 564 2.8E-14 T 15-10-2018 VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 205 403 3.1E-16 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 595 37.37 T 15-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 SUPERFAMILY SSF52833 483 593 1.21E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 Gene3D G3DSA:2.60.40.1250 37 170 4.9E-40 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VIBNI_A3280 00794a5db73434a1d4dbd2524c6f920b 595 SUPERFAMILY SSF74863 41 153 1.83E-38 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 Gene3D G3DSA:3.30.420.40 129 293 4.1E-132 T 15-10-2018 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.16 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 SUPERFAMILY SSF53067 101 309 7.59E-44 T 15-10-2018 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.0E-51 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 Gene3D G3DSA:3.30.420.40 3 315 4.1E-132 T 15-10-2018 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 Pfam PF00814 Glycoprotease family 24 307 4.6E-103 T 15-10-2018 IPR000905 Gcp-like domain VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 15-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 SUPERFAMILY SSF53067 3 123 9.06E-31 T 15-10-2018 VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 4.3E-125 T 15-10-2018 IPR017861 Kae1/TsaD family VIBNI_A2866 34cb02a42f4707553814dee53442536e 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.4E-135 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.806 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 Gene3D G3DSA:3.90.940.10 1 90 5.3E-30 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 Pfam PF01192 RNA polymerase Rpb6 10 60 5.2E-18 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 SUPERFAMILY SSF63562 1 78 1.1E-25 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VIBNI_A3711 f1db53e2eb42d07bf59f32d1d1be4d0e 90 SMART SM01409 8 61 2.2E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82693 554 657 3.92E-17 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82866 795 1011 2.75E-48 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 4.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82714 704 787 3.01E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 6.3E-280 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82714 183 265 7.72E-15 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82693 40 134 1.18E-26 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82866 290 489 6.28E-46 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.70.1440 654 848 0.0 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 SUPERFAMILY SSF82693 139 324 2.62E-19 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 15-10-2018 VIBNI_A0933 7a6e949e80d954a0a67d8f08ba3051f4 1046 Gene3D G3DSA:3.30.70.1430 556 653 0.0 T 15-10-2018 VIBNI_A1714 96df4296f21ca1453fd24d2549391db1 204 Gene3D G3DSA:1.10.3480.10 4 197 3.0E-35 T 15-10-2018 VIBNI_A1714 96df4296f21ca1453fd24d2549391db1 204 Pfam PF02613 Nitrate reductase delta subunit 47 159 3.3E-26 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VIBNI_A1714 96df4296f21ca1453fd24d2549391db1 204 SUPERFAMILY SSF89155 9 191 1.05E-46 T 15-10-2018 IPR036411 TorD-like superfamily VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 SUPERFAMILY SSF53383 500 957 9.95E-115 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Gene3D G3DSA:1.20.1650.10 464 562 1.7E-40 T 15-10-2018 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Gene3D G3DSA:3.40.640.10 88 356 1.9E-133 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Gene3D G3DSA:3.40.640.10 577 845 1.3E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 465 1.4E-156 T 15-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 781 802 - T 15-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 SUPERFAMILY SSF53383 43 465 2.31E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Gene3D G3DSA:3.90.1150.10 38 463 1.9E-133 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Pfam PF00202 Aminotransferase class-III 52 464 8.1E-94 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Gene3D G3DSA:3.90.1150.10 563 951 1.3E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2072 42b9ad7cf0c919328acd1b356237af77 962 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 535 894 2.7E-65 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 Gene3D G3DSA:3.30.1490.130 284 340 4.2E-173 T 15-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 Gene3D G3DSA:2.30.40.10 3 429 4.2E-173 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 Gene3D G3DSA:3.20.20.140 56 410 4.2E-173 T 15-10-2018 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 SUPERFAMILY SSF51338 3 474 2.7E-19 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 Pfam PF07969 Amidohydrolase family 46 460 3.2E-41 T 15-10-2018 IPR013108 Amidohydrolase 3 VIBNI_A3114 e439d0189fcec16f05879143ba9b97d2 478 SUPERFAMILY SSF51556 57 415 5.78E-87 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0780 73a69347ec7fb952fd6752ecd3a9b9ff 96 SUPERFAMILY SSF54909 2 79 1.74E-12 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PIRSF PIRSF000350 1 462 2.2E-70 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Gene3D G3DSA:3.50.50.60 6 332 3.8E-92 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Gene3D G3DSA:3.30.390.30 344 463 1.7E-32 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.9E-28 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-28 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-28 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-28 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-28 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 6.3E-60 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 465 65.074 T 15-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Gene3D G3DSA:3.50.50.60 157 275 3.8E-92 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.8E-51 T 15-10-2018 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 SUPERFAMILY SSF51905 1 318 6.25E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 2.1E-29 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VIBNI_A3354 a2be072a711f028bd8a479039638d3b5 465 SUPERFAMILY SSF55424 344 462 2.58E-30 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.6E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.6E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.6E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.7E-16 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 SUPERFAMILY SSF46955 2 121 2.49E-33 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 Gene3D G3DSA:1.10.1660.10 1 130 2.1E-35 T 15-10-2018 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 SMART SM00422 2 71 2.9E-29 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A3311 ffe3214b72bd154eb079f11d83a322b7 146 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.5E-62 T 15-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 SMART SM00331 292 508 2.2E-4 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 SUPERFAMILY SSF52172 144 276 2.56E-34 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 SUPERFAMILY SSF55874 43 132 1.3E-5 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 SMART SM00448 146 258 1.2E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Gene3D G3DSA:3.30.565.10 9 142 1.4E-15 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 324 507 8.3E-24 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Pfam PF00072 Response regulator receiver domain 148 255 4.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Gene3D G3DSA:3.60.40.10 295 510 5.8E-30 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Pfam PF13581 Histidine kinase-like ATPase domain 17 137 4.2E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 Gene3D G3DSA:3.40.50.2300 143 275 1.5E-34 T 15-10-2018 VIBNI_A1486 a686d39d04e0ea5034005e50f6b66a4b 511 SUPERFAMILY SSF81606 309 455 9.15E-6 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Gene3D G3DSA:3.30.70.2010 1 130 3.7E-39 T 15-10-2018 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Gene3D G3DSA:2.160.10.10 172 343 3.9E-70 T 15-10-2018 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.901 T 15-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Gene3D G3DSA:3.30.60.70 131 171 1.1E-20 T 15-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 6.9E-16 T 15-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 SUPERFAMILY SSF51161 90 324 3.47E-35 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A0540 97a35ea15068a12d75091273722f8a25 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 6.2E-181 T 15-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 Pfam PF00571 CBS domain 146 195 1.4E-6 T 15-10-2018 IPR000644 CBS domain VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 Pfam PF00571 CBS domain 75 132 1.1E-6 T 15-10-2018 IPR000644 CBS domain VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 Gene3D G3DSA:3.30.465.10 204 298 1.5E-31 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 SUPERFAMILY SSF54631 65 206 1.09E-32 T 15-10-2018 VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 Gene3D G3DSA:3.10.580.10 57 203 5.3E-54 T 15-10-2018 VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 SMART SM00116 147 195 0.028 T 15-10-2018 IPR000644 CBS domain VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 SMART SM00116 84 133 0.074 T 15-10-2018 IPR000644 CBS domain VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 SUPERFAMILY SSF56176 209 292 3.27E-23 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 SMART SM01091 211 289 5.1E-30 T 15-10-2018 IPR005170 Transporter-associated domain VIBNI_A2705 12e2fda057f11a0e6c4d94133ed0bb88 298 Pfam PF03471 Transporter associated domain 212 287 8.8E-23 T 15-10-2018 IPR005170 Transporter-associated domain VIBNI_A0829 336bfdf924769d20e40f34dab362c8e5 255 SUPERFAMILY SSF52540 5 229 5.43E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0829 336bfdf924769d20e40f34dab362c8e5 255 Gene3D G3DSA:3.40.50.300 2 255 8.3E-61 T 15-10-2018 VIBNI_A0829 336bfdf924769d20e40f34dab362c8e5 255 Pfam PF00005 ABC transporter 21 166 9.3E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0829 336bfdf924769d20e40f34dab362c8e5 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0829 336bfdf924769d20e40f34dab362c8e5 255 SMART SM00382 26 214 1.0E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 7.9E-40 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.569 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 SUPERFAMILY SSF82607 11 103 7.32E-37 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 PIRSF PIRSF004555 3 109 1.4E-39 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.2E-35 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VIBNI_A0816 87048bdeb4f9ae2bc2b1ea02d20fa84f 109 Gene3D G3DSA:3.30.1310.10 1 109 6.5E-48 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 Gene3D G3DSA:3.40.50.1980 231 346 1.1E-125 T 15-10-2018 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 Gene3D G3DSA:3.40.50.1980 30 229 1.1E-125 T 15-10-2018 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PIRSF PIRSF000099 1 427 4.7E-169 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.144 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.5E-165 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 Pfam PF00815 Histidinol dehydrogenase 26 424 2.2E-170 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 SUPERFAMILY SSF53720 4 424 5.49E-92 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A2291 aba8f4238cf732f5f7efc68958e02cfe 432 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 4.4E-103 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 SUPERFAMILY SSF46785 4 74 6.06E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 SMART SM00345 11 70 1.6E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 SUPERFAMILY SSF48008 97 226 4.45E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 SMART SM00895 99 219 1.8E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 Gene3D G3DSA:1.20.120.530 81 234 4.8E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 Pfam PF07729 FCD domain 99 218 2.8E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 3.5E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 Gene3D G3DSA:1.10.10.10 3 71 3.3E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 2.6E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1285 851bc96e68edef0f59a65d6d071bac44 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 2.6E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Gene3D G3DSA:3.10.580.10 308 410 1.0E-10 T 15-10-2018 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.5E-75 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Gene3D G3DSA:3.10.580.10 414 481 5.6E-7 T 15-10-2018 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 SUPERFAMILY SSF54631 309 464 8.18E-18 T 15-10-2018 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 2.5E-111 T 15-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Gene3D G3DSA:1.20.1080.10 6 270 5.9E-89 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Pfam PF01226 Formate/nitrite transporter 17 277 1.2E-71 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 SMART SM00116 320 368 0.085 T 15-10-2018 IPR000644 CBS domain VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 SMART SM00116 418 465 1.9 T 15-10-2018 IPR000644 CBS domain VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Pfam PF00571 CBS domain 315 364 3.2E-4 T 15-10-2018 IPR000644 CBS domain VIBNI_B1190 d00141eb3b8a794f54bbbe84455c92a0 482 Pfam PF00571 CBS domain 382 464 3.5E-4 T 15-10-2018 IPR000644 CBS domain VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 Gene3D G3DSA:1.20.5.320 450 487 7.9E-17 T 15-10-2018 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PIRSF PIRSF000109 1 492 2.7E-160 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 169 3.3E-34 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 SMART SM01350 194 484 4.7E-164 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 SUPERFAMILY SSF51735 7 169 1.47E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 72 101 5.2E-48 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 183 211 5.2E-48 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 6 29 5.2E-48 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 265 292 5.2E-48 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 371 393 5.2E-48 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 SUPERFAMILY SSF48179 192 484 2.72E-106 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 Gene3D G3DSA:1.10.1040.10 196 448 5.4E-90 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 Gene3D G3DSA:3.40.50.720 1 195 9.7E-48 T 15-10-2018 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 194 483 2.8E-114 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0963 850c09b13c66da8f0856db3ccb0710ed 494 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 8 484 2.9E-158 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 Gene3D G3DSA:3.20.20.140 80 511 5.8E-98 T 15-10-2018 VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 SUPERFAMILY SSF51556 79 512 1.83E-30 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 Pfam PF07969 Amidohydrolase family 68 552 7.9E-88 T 15-10-2018 IPR013108 Amidohydrolase 3 VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 SUPERFAMILY SSF51338 23 551 2.22E-21 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 Gene3D G3DSA:2.30.40.10 29 528 5.8E-98 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0172 97c4292085ca1730efe140935b394cdc 555 Gene3D G3DSA:3.10.310.70 99 218 5.8E-98 T 15-10-2018 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 PIRSF PIRSF005963 1 320 1.1E-129 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 SMART SM00729 84 293 6.3E-20 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 Gene3D G3DSA:3.20.20.70 84 292 4.0E-23 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.112 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.7E-150 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 SUPERFAMILY SSF102114 52 316 8.63E-70 T 15-10-2018 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 Pfam PF04055 Radical SAM superfamily 91 252 6.7E-19 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2720 17bcb4e7662ba1c80f73fbf2e2a82d6a 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 2.2E-8 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 SUPERFAMILY SSF46894 127 227 2.83E-22 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 Pfam PF00072 Response regulator receiver domain 6 115 8.3E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 SMART SM00862 151 225 2.9E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 SMART SM00448 4 114 1.8E-45 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-40 T 15-10-2018 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 SUPERFAMILY SSF52172 2 128 1.28E-43 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.2E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0273 1ba03b81afd3f2031182d5f3f19fbd85 230 Gene3D G3DSA:1.10.10.10 121 229 7.1E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 SMART SM00418 15 93 6.5E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 SUPERFAMILY SSF46785 7 96 6.17E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 1.5E-9 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 Gene3D G3DSA:1.10.10.10 1 97 3.8E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.0E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.0E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1120 f8adb8f0d7b22e103c66b966851e3c00 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.0E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 SUPERFAMILY SSF100950 78 236 2.99E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 Pfam PF00455 DeoR C terminal sensor domain 79 235 5.5E-45 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 SMART SM00420 4 56 3.1E-24 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.1E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.1E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 Gene3D G3DSA:1.10.10.10 1 53 2.3E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 SUPERFAMILY SSF46785 2 57 4.97E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 SMART SM01134 77 236 7.0E-58 T 15-10-2018 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VIBNI_B2087 b7a24a6d38fd12d0fa23c34dda390fc3 258 Pfam PF08220 DeoR-like helix-turn-helix domain 4 58 9.1E-23 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A1389 0609c4a4231b590399725def1aa9f206 571 SUPERFAMILY SSF161098 303 539 2.62E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1389 0609c4a4231b590399725def1aa9f206 571 SUPERFAMILY SSF161098 4 275 2.07E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1389 0609c4a4231b590399725def1aa9f206 571 Gene3D G3DSA:1.10.3720.10 300 549 1.1E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1389 0609c4a4231b590399725def1aa9f206 571 Gene3D G3DSA:1.10.3720.10 4 284 1.6E-19 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 Gene3D G3DSA:3.40.50.720 97 286 3.6E-111 T 15-10-2018 VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 SUPERFAMILY SSF51735 101 288 1.94E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 SUPERFAMILY SSF52283 4 136 3.21E-30 T 15-10-2018 VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 9.1E-54 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 317 3.6E-25 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 Gene3D G3DSA:3.40.50.720 25 312 3.6E-111 T 15-10-2018 VIBNI_A0442 59065b9a3dfaaacdb53f9749003d05fc 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_B1790 559d767065b6d174e73d8f6c0a240c44 342 SUPERFAMILY SSF161098 139 342 1.31E-39 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1790 559d767065b6d174e73d8f6c0a240c44 342 Gene3D G3DSA:1.10.3720.10 2 133 6.9E-15 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1790 559d767065b6d174e73d8f6c0a240c44 342 Gene3D G3DSA:1.10.3720.10 134 330 4.5E-34 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1790 559d767065b6d174e73d8f6c0a240c44 342 SUPERFAMILY SSF161098 7 115 2.15E-16 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1790 559d767065b6d174e73d8f6c0a240c44 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 177 332 3.1E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0544 19630c5bc684a6bb5ab0b6d347679fc2 150 Gene3D G3DSA:1.20.120.10 26 148 1.7E-24 T 15-10-2018 VIBNI_B0544 19630c5bc684a6bb5ab0b6d347679fc2 150 SUPERFAMILY SSF47175 27 147 8.24E-28 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VIBNI_B0544 19630c5bc684a6bb5ab0b6d347679fc2 150 Pfam PF01322 Cytochrome C' 31 147 2.5E-24 T 15-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 SUPERFAMILY SSF52540 282 528 1.2E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 Pfam PF00005 ABC transporter 315 461 1.8E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 SMART SM00382 324 510 7.2E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 SMART SM00382 29 221 4.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 Pfam PF00005 ABC transporter 20 170 2.4E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 SUPERFAMILY SSF52540 3 234 7.28E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 Gene3D G3DSA:3.40.50.300 1 266 1.7E-68 T 15-10-2018 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 Gene3D G3DSA:3.40.50.300 296 560 4.1E-66 T 15-10-2018 VIBNI_B0772 c6c6f405ca591549f0317138a83c29f8 567 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 3.2E-22 T 15-10-2018 IPR022216 Putative ABC cobalt transporter VIBNI_B0524 abc1e054785c4d0c0213dc44fb581720 278 SUPERFAMILY SSF161098 10 278 1.5E-69 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0524 abc1e054785c4d0c0213dc44fb581720 278 Gene3D G3DSA:1.10.3720.10 2 265 7.4E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0524 abc1e054785c4d0c0213dc44fb581720 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 270 8.6E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0407 368e37205c04f898e834787f648a9dfb 314 Gene3D G3DSA:3.40.190.10 116 258 3.0E-100 T 15-10-2018 VIBNI_A0407 368e37205c04f898e834787f648a9dfb 314 Pfam PF12849 PBP superfamily domain 29 287 1.0E-29 T 15-10-2018 IPR024370 PBP domain VIBNI_A0407 368e37205c04f898e834787f648a9dfb 314 Gene3D G3DSA:3.40.190.10 31 302 3.0E-100 T 15-10-2018 VIBNI_A0407 368e37205c04f898e834787f648a9dfb 314 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 17 300 1.6E-78 T 15-10-2018 IPR011862 Phosphate binding protein GO:0042301 VIBNI_A0407 368e37205c04f898e834787f648a9dfb 314 SUPERFAMILY SSF53850 29 311 1.19E-67 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SUPERFAMILY SSF55785 353 478 6.47E-7 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 490 610 7.3E-14 T 15-10-2018 IPR000014 PAS domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 487 1.6E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SUPERFAMILY SSF55073 619 775 5.02E-42 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SMART SM00052 787 1035 3.2E-62 T 15-10-2018 IPR001633 EAL domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.40.50.2300 78 290 1.9E-7 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.30.450.20 493 605 2.0E-14 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SMART SM00091 366 433 0.68 T 15-10-2018 IPR000014 PAS domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SMART SM00091 492 559 0.0014 T 15-10-2018 IPR000014 PAS domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Pfam PF00990 Diguanylate cyclase, GGDEF domain 614 771 1.2E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.30.70.270 608 776 5.2E-47 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.30.450.20 372 492 3.7E-11 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.20.20.450 777 1037 5.9E-76 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 611 774 9.6E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SUPERFAMILY SSF141868 793 1041 2.48E-67 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Pfam PF00563 EAL domain 795 1030 1.0E-58 T 15-10-2018 IPR001633 EAL domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SMART SM00267 603 775 1.6E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 SUPERFAMILY SSF55785 477 599 7.99E-17 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Gene3D G3DSA:3.40.50.2300 136 294 1.9E-7 T 15-10-2018 VIBNI_A3455 c6269b14d46977b0c6236daaa94dce2f 1049 Pfam PF13426 PAS domain 503 602 3.2E-10 T 15-10-2018 IPR000014 PAS domain VIBNI_B0033 47a4850ae123d18bed69e200369c84ee 292 Pfam PF00950 ABC 3 transport family 10 265 1.8E-81 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VIBNI_B0033 47a4850ae123d18bed69e200369c84ee 292 SUPERFAMILY SSF81345 5 261 2.88E-39 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 SUPERFAMILY SSF81624 2 138 1.96E-38 T 15-10-2018 IPR035937 MutM-like, N-terminal VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.2E-31 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.8E-100 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.1E-7 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 SMART SM01232 129 221 1.9E-47 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.261 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 SUPERFAMILY SSF46946 130 221 3.14E-31 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Gene3D G3DSA:3.20.190.10 2 128 6.0E-40 T 15-10-2018 IPR035937 MutM-like, N-terminal VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.3E-30 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 Gene3D G3DSA:1.10.8.50 131 269 1.8E-49 T 15-10-2018 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 SUPERFAMILY SSF57716 217 269 1.28E-17 T 15-10-2018 VIBNI_A3695 d9c9fa515e209074080a7f0c494cdf57 273 SMART SM00898 2 115 1.4E-48 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VIBNI_B1011 86a8c7426c1ee03740727754ff8bf35e 428 Pfam PF13416 Bacterial extracellular solute-binding protein 46 360 4.9E-46 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1011 86a8c7426c1ee03740727754ff8bf35e 428 Gene3D G3DSA:3.40.190.10 34 381 1.0E-105 T 15-10-2018 VIBNI_B1011 86a8c7426c1ee03740727754ff8bf35e 428 SUPERFAMILY SSF53850 25 419 6.42E-78 T 15-10-2018 VIBNI_B1011 86a8c7426c1ee03740727754ff8bf35e 428 Gene3D G3DSA:3.40.190.10 145 417 1.0E-105 T 15-10-2018 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.0E-48 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 Gene3D G3DSA:2.40.100.10 1 164 8.0E-67 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 PIRSF PIRSF001467 1 163 9.3E-29 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.6E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.6E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.6E-11 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A2281 dbe0425ed72156e58d63c2202719e835 164 SUPERFAMILY SSF50891 1 162 7.74E-59 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_A2755 82e49cb8ce6ffe2d23c5bd051a613c85 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 1.9E-110 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A2755 82e49cb8ce6ffe2d23c5bd051a613c85 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 419 2.8E-122 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2755 82e49cb8ce6ffe2d23c5bd051a613c85 427 PIRSF PIRSF006066 1 427 3.9E-136 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1350 8cb33993b419bf353f4971f7b804dfea 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 429 9.2E-68 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A0341 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Gene3D G3DSA:3.40.50.300 180 381 1.7E-19 T 15-10-2018 VIBNI_A0341 0fbb0a0a0b07d9f99c65d2a907c9def8 460 SUPERFAMILY SSF52540 16 355 7.78E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0341 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Pfam PF04851 Type III restriction enzyme, res subunit 2 76 1.5E-5 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A0341 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Gene3D G3DSA:3.40.50.300 1 170 2.6E-14 T 15-10-2018 VIBNI_B1966 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Gene3D G3DSA:3.40.50.300 180 381 1.7E-19 T 15-10-2018 VIBNI_B1966 0fbb0a0a0b07d9f99c65d2a907c9def8 460 SUPERFAMILY SSF52540 16 355 7.78E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1966 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Pfam PF04851 Type III restriction enzyme, res subunit 2 76 1.5E-5 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_B1966 0fbb0a0a0b07d9f99c65d2a907c9def8 460 Gene3D G3DSA:3.40.50.300 1 170 2.6E-14 T 15-10-2018 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 SUPERFAMILY SSF53738 204 312 5.1E-21 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Gene3D G3DSA:3.40.120.10 324 445 2.0E-31 T 15-10-2018 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 9.7E-8 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 9.7E-8 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 9.7E-8 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 310 2.2E-24 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Gene3D G3DSA:3.30.310.50 455 554 9.2E-8 T 15-10-2018 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 179 1.4E-40 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 SUPERFAMILY SSF53738 31 216 1.02E-42 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 494 548 2.3E-10 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 SUPERFAMILY SSF53738 302 445 4.32E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Gene3D G3DSA:3.40.120.10 32 186 2.4E-47 T 15-10-2018 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Gene3D G3DSA:3.40.120.10 203 323 1.9E-21 T 15-10-2018 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 SUPERFAMILY SSF55957 461 556 3.79E-15 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1658 ea6cb068113451ba7e4f3735a2e68d79 568 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 441 2.5E-18 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A0467 8a3a6f54257e0dec399ddeaa8e1a85a3 334 Gene3D G3DSA:3.40.50.2300 133 267 2.0E-73 T 15-10-2018 VIBNI_A0467 8a3a6f54257e0dec399ddeaa8e1a85a3 334 Pfam PF13407 Periplasmic binding protein domain 32 286 5.0E-52 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A0467 8a3a6f54257e0dec399ddeaa8e1a85a3 334 SUPERFAMILY SSF53822 27 328 1.81E-68 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0467 8a3a6f54257e0dec399ddeaa8e1a85a3 334 Gene3D G3DSA:3.40.50.2300 30 290 2.0E-73 T 15-10-2018 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 Gene3D G3DSA:3.40.50.12740 2 208 9.2E-61 T 15-10-2018 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 Pfam PF00072 Response regulator receiver domain 5 116 7.6E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 SMART SM00421 145 202 6.4E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 1.7E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 SUPERFAMILY SSF46894 139 208 4.42E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 SMART SM00448 2 115 3.5E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 SUPERFAMILY SSF52172 1 132 2.99E-31 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.2E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.2E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1857 133ddd321b787910bf3e679cf7f78f9c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.2E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3807 baefba45d5e9c29c2876523246163adb 259 Pfam PF09836 Putative DNA-binding domain 8 96 1.3E-20 T 15-10-2018 IPR018640 Putative DNA-binding domain, bacteria VIBNI_A3819 133f5987e8325af9b565bf4c5e2441ce 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.7E-28 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VIBNI_A3819 133f5987e8325af9b565bf4c5e2441ce 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 7.8E-23 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VIBNI_A3819 133f5987e8325af9b565bf4c5e2441ce 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.834 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VIBNI_A2040 6ef419bf14f30d610e928ea3971b880d 419 Gene3D G3DSA:1.20.1420.20 16 400 2.7E-83 T 15-10-2018 IPR038352 Imelysin-like domain superfamily VIBNI_A2040 6ef419bf14f30d610e928ea3971b880d 419 Pfam PF09375 Imelysin 39 397 1.7E-93 T 15-10-2018 IPR018976 Imelysin-like domain VIBNI_A1761 f0680da8cfc6b35388510baefe01643e 319 Gene3D G3DSA:3.40.50.2300 128 311 3.2E-88 T 15-10-2018 VIBNI_A1761 f0680da8cfc6b35388510baefe01643e 319 SUPERFAMILY SSF53822 26 316 1.22E-46 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1761 f0680da8cfc6b35388510baefe01643e 319 Pfam PF13407 Periplasmic binding protein domain 29 287 1.3E-26 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1761 f0680da8cfc6b35388510baefe01643e 319 Gene3D G3DSA:3.40.50.2300 27 303 3.2E-88 T 15-10-2018 VIBNI_A1761 f0680da8cfc6b35388510baefe01643e 319 PIRSF PIRSF002816 2 316 8.2E-57 T 15-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 Gene3D G3DSA:1.10.10.60 189 302 8.9E-24 T 15-10-2018 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 Gene3D G3DSA:2.60.120.10 27 108 5.1E-10 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 SUPERFAMILY SSF51215 40 177 1.96E-13 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 SMART SM00342 210 293 5.5E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 Pfam PF12833 Helix-turn-helix domain 216 294 3.9E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 SUPERFAMILY SSF46689 249 296 2.11E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 9 294 7.3E-111 T 15-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 Pfam PF02311 AraC-like ligand binding domain 40 167 2.0E-14 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 2.4E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1980 c6bab57dfb4e8d4f940692f29b12d505 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 2.4E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A3446 3d8c9e9526fd6e9dc32ba21bceb72f0b 712 Gene3D G3DSA:3.30.420.10 284 479 6.5E-14 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A3446 3d8c9e9526fd6e9dc32ba21bceb72f0b 712 Pfam PF00665 Integrase core domain 290 428 1.2E-7 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A3446 3d8c9e9526fd6e9dc32ba21bceb72f0b 712 SUPERFAMILY SSF53098 316 434 7.78E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 504 3.2E-46 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 SUPERFAMILY SSF58104 234 538 2.09E-73 T 15-10-2018 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 SMART SM00283 276 537 8.6E-75 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 Gene3D G3DSA:1.10.287.950 207 539 3.2E-73 T 15-10-2018 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 SMART SM00304 208 261 7.0E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 Pfam PF00672 HAMP domain 209 257 7.5E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 8.5E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 55 70 8.5E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1371 80464102cf8f7eaf9e292574631d1bdb 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 8.5E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0447 7814febdfb65f2d646e52df4ba28e126 130 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 126 0.001 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0447 7814febdfb65f2d646e52df4ba28e126 130 SUPERFAMILY SSF102220 28 130 3.4E-22 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0447 7814febdfb65f2d646e52df4ba28e126 130 Pfam PF03603 DNA polymerase III psi subunit 4 127 5.6E-31 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0447 7814febdfb65f2d646e52df4ba28e126 130 PIRSF PIRSF029225 1 130 3.1E-31 T 15-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0447 7814febdfb65f2d646e52df4ba28e126 130 Gene3D G3DSA:3.40.50.10220 33 130 5.3E-21 T 15-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A1511 5d221d5e9a39d4f9dbd46dd4ad6346ba 505 Gene3D G3DSA:3.40.605.10 42 503 4.9E-190 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1511 5d221d5e9a39d4f9dbd46dd4ad6346ba 505 Pfam PF00171 Aldehyde dehydrogenase family 32 465 6.8E-48 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A1511 5d221d5e9a39d4f9dbd46dd4ad6346ba 505 SUPERFAMILY SSF53720 26 501 2.49E-97 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A1511 5d221d5e9a39d4f9dbd46dd4ad6346ba 505 Gene3D G3DSA:3.40.309.10 266 453 4.9E-190 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 SUPERFAMILY SSF53218 182 327 5.76E-43 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 SUPERFAMILY SSF63882 7 181 5.89E-53 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Pfam PF03454 MoeA C-terminal region (domain IV) 337 407 8.7E-20 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Gene3D G3DSA:2.40.340.10 333 402 1.5E-139 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Gene3D G3DSA:2.170.190.11 53 146 1.5E-139 T 15-10-2018 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 SUPERFAMILY SSF63867 333 411 3.27E-22 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 181 318 1.2E-32 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Gene3D G3DSA:3.90.105.10 30 179 1.5E-139 T 15-10-2018 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 SMART SM00852 185 322 3.6E-44 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 172 1.3E-42 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Gene3D G3DSA:3.40.980.10 180 332 1.5E-139 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_B1026 c1f59a3ffce4d7a672b8b40a4dc2f2b3 412 Pfam PF00994 Probable molybdopterin binding domain 187 321 3.9E-26 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 Gene3D G3DSA:3.40.190.10 103 286 1.6E-43 T 15-10-2018 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 Gene3D G3DSA:3.40.190.10 163 259 1.6E-43 T 15-10-2018 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 SUPERFAMILY SSF46785 4 88 6.09E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 Pfam PF03466 LysR substrate binding domain 94 290 1.1E-26 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 SUPERFAMILY SSF53850 94 293 7.96E-32 T 15-10-2018 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 Gene3D G3DSA:1.10.10.10 7 96 4.3E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.5E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0509 bbd014ae7744d98085863fff7f9970c3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Gene3D G3DSA:3.10.150.10 248 366 5.1E-40 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.7E-36 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 SUPERFAMILY SSF55979 245 366 2.28E-37 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Gene3D G3DSA:3.10.150.10 1 122 6.0E-41 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.3E-106 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 SUPERFAMILY SSF55979 126 244 8.72E-29 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 2.2E-36 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Gene3D G3DSA:3.10.150.10 125 247 1.1E-37 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.1E-39 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 SUPERFAMILY SSF55979 1 118 2.44E-28 T 15-10-2018 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 SMART SM00480 17 362 7.1E-146 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VIBNI_A0002 dec1af60095140d6e26394884b132fa0 366 PIRSF PIRSF000804 1 366 4.9E-121 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VIBNI_B1693 c29d06fb63210a23f96699d61ad74d2c 341 Pfam PF12146 Serine aminopeptidase, S33 77 175 4.6E-8 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 VIBNI_B1693 c29d06fb63210a23f96699d61ad74d2c 341 SUPERFAMILY SSF53474 22 300 2.06E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1693 c29d06fb63210a23f96699d61ad74d2c 341 PIRSF PIRSF031982 1 341 3.0E-83 T 15-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL VIBNI_A3209 ee1c4eaa857edff132ef1aa1d68ec656 616 SUPERFAMILY SSF53649 255 582 3.4E-56 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A3209 ee1c4eaa857edff132ef1aa1d68ec656 616 Gene3D G3DSA:3.40.720.10 246 540 2.4E-56 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A3209 ee1c4eaa857edff132ef1aa1d68ec656 616 PIRSF PIRSF004950 5 616 1.7E-196 T 15-10-2018 IPR012159 Inner membrane protein YejM VIBNI_A3209 ee1c4eaa857edff132ef1aa1d68ec656 616 Pfam PF11893 Domain of unknown function (DUF3413) 6 248 1.4E-53 T 15-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VIBNI_A3209 ee1c4eaa857edff132ef1aa1d68ec656 616 Pfam PF00884 Sulfatase 256 531 4.5E-33 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 Pfam PF00005 ABC transporter 20 161 1.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 Gene3D G3DSA:3.40.50.300 3 221 3.6E-62 T 15-10-2018 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 Gene3D G3DSA:2.40.50.140 288 343 5.3E-27 T 15-10-2018 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 Gene3D G3DSA:2.40.50.940 222 351 5.3E-27 T 15-10-2018 VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 SUPERFAMILY SSF52540 4 241 2.34E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 SUPERFAMILY SSF50331 236 351 2.13E-14 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 SMART SM00382 28 211 2.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2092 bcc381845e347bea92cd223aa5468a6a 351 Pfam PF08402 TOBE domain 281 351 2.5E-4 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1505 13093156589b0329cc04ea04d36d7ca2 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 32 398 5.1E-42 T 15-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1505 13093156589b0329cc04ea04d36d7ca2 412 Gene3D G3DSA:1.10.4160.10 5 410 1.1E-39 T 15-10-2018 IPR038271 Purine-cytosine permease superfamily VIBNI_A0551 c8baa60a924b1322d8739bf684b8b5ba 271 Gene3D G3DSA:3.40.50.720 7 270 2.8E-110 T 15-10-2018 VIBNI_A0551 c8baa60a924b1322d8739bf684b8b5ba 271 SUPERFAMILY SSF69572 6 267 1.06E-65 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VIBNI_A0551 c8baa60a924b1322d8739bf684b8b5ba 271 Pfam PF00899 ThiF family 23 260 4.7E-39 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VIBNI_B2031 05141c0c5ff7c071aee184a1ea953944 104 Pfam PF00355 Rieske [2Fe-2S] domain 5 91 1.8E-18 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VIBNI_B2031 05141c0c5ff7c071aee184a1ea953944 104 Gene3D G3DSA:2.102.10.10 1 104 1.8E-27 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_B2031 05141c0c5ff7c071aee184a1ea953944 104 SUPERFAMILY SSF50022 3 103 3.27E-26 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 94 100 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 29 43 4.6E-10 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 91 103 4.6E-10 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 5 21 4.6E-10 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 152 4.6E-10 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 Gene3D G3DSA:3.90.220.20 261 367 1.0E-9 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 Gene3D G3DSA:3.40.50.150 8 217 1.7E-27 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 SUPERFAMILY SSF116734 250 366 4.91E-10 T 15-10-2018 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 Pfam PF02384 N-6 DNA Methylase 6 205 1.3E-12 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VIBNI_A0868 c5612fa9fb78fd2cc5af1493cc6acf51 370 SUPERFAMILY SSF53335 4 207 7.06E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1984 e63bc2268d5c44375afd6cd8feb5558c 196 Pfam PF00293 NUDIX domain 35 149 6.2E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A1984 e63bc2268d5c44375afd6cd8feb5558c 196 SUPERFAMILY SSF55811 14 188 6.09E-35 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A1984 e63bc2268d5c44375afd6cd8feb5558c 196 Gene3D G3DSA:3.90.79.10 15 193 2.5E-50 T 15-10-2018 VIBNI_B1936 2d301780fdc94cad31b121b564d51205 283 SUPERFAMILY SSF51735 4 227 1.3E-16 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1936 2d301780fdc94cad31b121b564d51205 283 Pfam PF04321 RmlD substrate binding domain 5 105 1.2E-6 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VIBNI_B1936 2d301780fdc94cad31b121b564d51205 283 Gene3D G3DSA:3.40.50.720 5 268 5.9E-24 T 15-10-2018 VIBNI_A2927 23c439845b258a6021751adfae583c2b 323 Gene3D G3DSA:1.10.600.10 1 323 2.2E-121 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily VIBNI_A2927 23c439845b258a6021751adfae583c2b 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site VIBNI_A2927 23c439845b258a6021751adfae583c2b 323 Pfam PF00348 Polyprenyl synthetase 32 272 8.0E-75 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VIBNI_A2927 23c439845b258a6021751adfae583c2b 323 SUPERFAMILY SSF48576 4 322 4.64E-102 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily VIBNI_A2927 23c439845b258a6021751adfae583c2b 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site VIBNI_A1882 03d101f288e688637303688b7b80778f 824 Gene3D G3DSA:3.30.70.270 385 564 5.6E-57 T 15-10-2018 VIBNI_A1882 03d101f288e688637303688b7b80778f 824 SUPERFAMILY SSF55073 395 552 1.49E-47 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1882 03d101f288e688637303688b7b80778f 824 Gene3D G3DSA:3.20.20.450 565 823 3.4E-91 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1882 03d101f288e688637303688b7b80778f 824 SUPERFAMILY SSF141868 569 816 2.09E-84 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1882 03d101f288e688637303688b7b80778f 824 Pfam PF00990 Diguanylate cyclase, GGDEF domain 390 547 8.1E-47 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1882 03d101f288e688637303688b7b80778f 824 SMART SM00267 379 551 1.9E-61 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1882 03d101f288e688637303688b7b80778f 824 Pfam PF00563 EAL domain 569 804 2.8E-71 T 15-10-2018 IPR001633 EAL domain VIBNI_A1882 03d101f288e688637303688b7b80778f 824 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 550 5.8E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1882 03d101f288e688637303688b7b80778f 824 SMART SM00052 561 809 9.7E-98 T 15-10-2018 IPR001633 EAL domain VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.2E-38 T 15-10-2018 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 Gene3D G3DSA:3.40.50.2300 61 306 7.0E-78 T 15-10-2018 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 Gene3D G3DSA:1.10.260.40 1 59 8.3E-26 T 15-10-2018 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 SUPERFAMILY SSF53822 60 332 3.37E-87 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 Gene3D G3DSA:3.40.50.2300 160 289 7.0E-78 T 15-10-2018 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 SMART SM00354 1 71 1.4E-32 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.8E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 SUPERFAMILY SSF47413 1 59 6.47E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A3605 ff307def435831151cef7abf693f4afa 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 Gene3D G3DSA:3.40.47.10 1 317 1.4E-129 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 72.534 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 7.4E-33 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 4.3E-144 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 SUPERFAMILY SSF53901 3 317 4.79E-72 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2363 6448f3c81429f38449af8eccf11c218c 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 8.3E-37 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_A1290 92c7f57e82f9c913d321a4969c3b4e75 284 SUPERFAMILY SSF161098 20 283 5.36E-71 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1290 92c7f57e82f9c913d321a4969c3b4e75 284 Gene3D G3DSA:1.10.3720.10 18 272 2.1E-59 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1290 92c7f57e82f9c913d321a4969c3b4e75 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 278 4.0E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 SMART SM00116 96 144 7.6E-10 T 15-10-2018 IPR000644 CBS domain VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 SMART SM00116 158 206 4.2E-8 T 15-10-2018 IPR000644 CBS domain VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 PIRSF PIRSF000130 1 488 7.7E-200 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 SUPERFAMILY SSF51412 1 477 2.22E-123 T 15-10-2018 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 SUPERFAMILY SSF54631 95 203 2.78E-26 T 15-10-2018 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.0E-196 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 Pfam PF00571 CBS domain 149 201 5.6E-6 T 15-10-2018 IPR000644 CBS domain VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 Pfam PF00571 CBS domain 96 140 6.7E-9 T 15-10-2018 IPR000644 CBS domain VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 SMART SM01240 7 473 0.0 T 15-10-2018 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.908 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 3.3E-161 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VIBNI_A2768 90f54e1713b7954cdc6a7be3c633adf8 488 Gene3D G3DSA:3.20.20.70 1 486 2.7E-211 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PIRSF PIRSF036388 1 430 7.1E-221 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 4.8E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 4.8E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 4.8E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 4.8E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 4.8E-46 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 4.4E-102 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 Pfam PF12404 Peptidase 5 81 1.9E-31 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 SUPERFAMILY SSF53187 106 427 1.6E-100 T 15-10-2018 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 Gene3D G3DSA:3.40.630.10 90 430 3.7E-106 T 15-10-2018 VIBNI_A2780 6b393fe78155c7184b25d993e937553d 430 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.579 T 15-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 SUPERFAMILY SSF51735 8 259 5.04E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 14 31 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 1.6E-60 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 7.1E-50 T 15-10-2018 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 Gene3D G3DSA:3.40.50.720 2 260 9.5E-64 T 15-10-2018 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 10 260 3.1E-108 T 15-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.6E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.6E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.6E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0619 b6d8de93157607dcebc1728206c0d3c2 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 SUPERFAMILY SSF51735 4 247 1.13E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.4E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 Gene3D G3DSA:3.40.50.720 1 247 1.4E-81 T 15-10-2018 VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 5.8E-67 T 15-10-2018 VIBNI_A0959 4689f55083e05727544d59971ee8afa4 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 SUPERFAMILY SSF89562 2 158 8.63E-45 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 Pfam PF03737 Aldolase/RraA 6 153 6.4E-37 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.62 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 Gene3D G3DSA:3.50.30.40 1 161 3.0E-60 T 15-10-2018 VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.9E-68 T 15-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VIBNI_A3610 f521c582c9e4d5605018abc6ff722b33 176 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 1.3E-83 T 15-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 PRINTS PR01438 Universal stress protein signature 103 115 7.7E-12 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 PRINTS PR01438 Universal stress protein signature 2 20 7.7E-12 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 PRINTS PR01438 Universal stress protein signature 121 143 7.7E-12 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 Gene3D G3DSA:3.40.50.620 1 143 3.5E-36 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 PIRSF PIRSF006276 1 146 3.0E-20 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 Pfam PF00582 Universal stress protein family 1 143 5.4E-33 T 15-10-2018 IPR006016 UspA VIBNI_A2934 eb21aa356fe28b091f0b30669d18cdb6 146 SUPERFAMILY SSF52402 2 144 3.41E-34 T 15-10-2018 VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 Pfam PF00106 short chain dehydrogenase 6 192 1.7E-60 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 SUPERFAMILY SSF51735 4 258 1.36E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 Gene3D G3DSA:3.40.50.720 1 259 1.9E-84 T 15-10-2018 VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 195 0.0024 T 15-10-2018 VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.3E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.3E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2142 fccab1240ffe2b73496c4d8b958149f6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.3E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2745 9357a21991b210af30bbe8d55c9b97ce 220 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 20 211 1.7E-76 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A2745 9357a21991b210af30bbe8d55c9b97ce 220 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 14 216 41.818 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A2745 9357a21991b210af30bbe8d55c9b97ce 220 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 16 212 3.4E-74 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A2745 9357a21991b210af30bbe8d55c9b97ce 220 Gene3D G3DSA:3.90.870.10 2 220 1.5E-84 T 15-10-2018 VIBNI_A2745 9357a21991b210af30bbe8d55c9b97ce 220 SUPERFAMILY SSF55821 10 215 1.53E-81 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 Gene3D G3DSA:1.10.10.200 1 81 8.2E-35 T 15-10-2018 IPR017856 Integrase-like, N-terminal VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.351 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 Pfam PF01709 Transcriptional regulator 5 236 1.0E-96 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 SUPERFAMILY SSF75625 3 245 1.16E-96 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 Gene3D G3DSA:3.30.70.980 85 236 1.9E-59 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 Gene3D G3DSA:3.30.70.980 130 205 1.9E-59 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2268 2f7cc81c3e90b9be5217e4776bf6166a 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.0E-104 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 PIRSF PIRSF006107 1 714 0.0 T 15-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 SUPERFAMILY SSF52540 1 240 2.2E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Pfam PF07085 DRTGG domain 233 344 5.1E-28 T 15-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Gene3D G3DSA:3.40.1390.20 229 365 1.2E-13 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 4.9E-137 T 15-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Pfam PF13500 AAA domain 3 229 1.0E-48 T 15-10-2018 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 SUPERFAMILY SSF75138 229 353 9.29E-25 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Gene3D G3DSA:3.40.50.300 1 228 2.7E-11 T 15-10-2018 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 SUPERFAMILY SSF53659 392 709 2.22E-95 T 15-10-2018 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Gene3D G3DSA:3.40.50.10950 399 709 1.7E-136 T 15-10-2018 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Gene3D G3DSA:3.40.50.10750 529 682 1.7E-136 T 15-10-2018 VIBNI_A2402 e567799079ec189b98d55f26d6221c8e 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 8.7E-129 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 PIRSF PIRSF000157 1 934 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Pfam PF00676 Dehydrogenase E1 component 220 515 3.9E-49 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Gene3D G3DSA:1.10.287.1150 84 166 8.8E-30 T 15-10-2018 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 1.2E-65 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Gene3D G3DSA:3.40.50.12470 556 802 2.7E-172 T 15-10-2018 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 SUPERFAMILY SSF52518 576 793 1.77E-52 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 932 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Gene3D G3DSA:3.40.50.970 167 533 1.2E-146 T 15-10-2018 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 SUPERFAMILY SSF52518 121 539 9.16E-86 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 SMART SM00861 593 786 2.4E-63 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Gene3D G3DSA:3.40.50.11610 723 929 2.7E-172 T 15-10-2018 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 3.1E-14 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VIBNI_A2563 2c7a010ab642ceb27e9d9d1c87b4332d 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 7.6E-54 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VIBNI_B0775 309aadd1056b604ba500b46c5ab8e8ec 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 3.5E-12 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0775 309aadd1056b604ba500b46c5ab8e8ec 131 SUPERFAMILY SSF54593 4 129 6.18E-27 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0775 309aadd1056b604ba500b46c5ab8e8ec 131 Gene3D G3DSA:3.10.180.10 2 129 3.0E-30 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 6.2E-120 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 Gene3D G3DSA:1.20.1090.10 172 361 3.6E-70 T 15-10-2018 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 72.708 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 Gene3D G3DSA:3.40.50.1970 1 171 2.4E-64 T 15-10-2018 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 Pfam PF01761 3-dehydroquinate synthase 67 324 1.1E-109 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 PIRSF PIRSF001455 13 361 3.8E-107 T 15-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VIBNI_A3579 a4fa138c322e15d5a967ba02666c7e1a 362 SUPERFAMILY SSF56796 4 355 4.19E-114 T 15-10-2018 VIBNI_A1345 46bd1413c1c1718d961571ebc8357c52 237 Gene3D G3DSA:3.40.50.880 14 227 1.1E-39 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1345 46bd1413c1c1718d961571ebc8357c52 237 Pfam PF00117 Glutamine amidotransferase class-I 54 186 4.9E-12 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A1345 46bd1413c1c1718d961571ebc8357c52 237 SUPERFAMILY SSF52317 21 205 7.03E-35 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Gene3D G3DSA:2.40.40.20 651 809 1.6E-45 T 15-10-2018 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Gene3D G3DSA:3.90.55.10 83 617 1.5E-219 T 15-10-2018 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Pfam PF00384 Molybdopterin oxidoreductase 86 556 6.2E-103 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 3.9E-23 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 SUPERFAMILY SSF50692 670 813 3.62E-39 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Gene3D G3DSA:3.40.228.10 178 643 1.5E-219 T 15-10-2018 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 6.1E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 SUPERFAMILY SSF53706 47 667 3.01E-160 T 15-10-2018 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 814 0.0 T 15-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 VIBNI_B0809 a725b487d2468f5c5e4e2a5f379993c7 815 Gene3D G3DSA:3.40.50.740 86 566 1.5E-219 T 15-10-2018 VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 1.5E-68 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 PIRSF PIRSF015617 6 201 7.4E-66 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 SUPERFAMILY SSF52540 12 201 5.93E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 2.7E-6 T 15-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 Gene3D G3DSA:3.40.50.300 11 201 1.3E-69 T 15-10-2018 VIBNI_A2375 2b19f09a6d4b9ef042278fbc5b58e6ec 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 201 1.0E-58 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VIBNI_B0342 d1b1b36fb9adf7ee2149767ddf57f1fb 514 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 508 3.6E-76 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VIBNI_B0342 d1b1b36fb9adf7ee2149767ddf57f1fb 514 Pfam PF00498 FHA domain 35 102 1.4E-6 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VIBNI_B0342 d1b1b36fb9adf7ee2149767ddf57f1fb 514 SUPERFAMILY SSF49879 26 109 6.53E-9 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VIBNI_B0342 d1b1b36fb9adf7ee2149767ddf57f1fb 514 Gene3D G3DSA:2.60.200.20 4 123 4.6E-8 T 15-10-2018 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 4.3E-5 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 4.3E-5 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 7.5E-130 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 Gene3D G3DSA:3.30.930.10 1 324 4.0E-112 T 15-10-2018 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.518 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 SUPERFAMILY SSF55681 13 322 1.25E-82 T 15-10-2018 VIBNI_A3234 f81eb7482271c36d22fa98754038e781 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 1.3E-46 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 Gene3D G3DSA:1.10.287.470 91 149 1.7E-71 T 15-10-2018 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 259 2.4E-12 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 Gene3D G3DSA:2.40.50.100 57 189 1.7E-71 T 15-10-2018 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 338 1.3E-78 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 SUPERFAMILY SSF111369 47 266 1.57E-28 T 15-10-2018 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 Gene3D G3DSA:2.40.420.20 37 335 1.7E-71 T 15-10-2018 VIBNI_A1364 bc4fda3c13b148431b119759a7e7b796 344 Gene3D G3DSA:2.40.30.170 43 268 1.7E-71 T 15-10-2018 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 SUPERFAMILY SSF111369 48 228 2.09E-13 T 15-10-2018 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 Gene3D G3DSA:2.40.420.20 39 365 2.0E-53 T 15-10-2018 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 367 1.1E-33 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 Gene3D G3DSA:2.40.50.100 55 215 2.0E-53 T 15-10-2018 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 Gene3D G3DSA:1.10.287.470 89 175 2.0E-53 T 15-10-2018 VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 4.5E-17 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_B1470 a53eee0ac440ab52c261d0916ebdbc25 376 Gene3D G3DSA:2.40.30.170 44 305 2.0E-53 T 15-10-2018 VIBNI_A1288 369fdf2e8e21bb95e59d48ffeda44168 570 Gene3D G3DSA:3.50.30.80 372 526 6.9E-48 T 15-10-2018 VIBNI_A1288 369fdf2e8e21bb95e59d48ffeda44168 570 SUPERFAMILY SSF52016 372 557 6.36E-54 T 15-10-2018 VIBNI_A1288 369fdf2e8e21bb95e59d48ffeda44168 570 Pfam PF00920 Dehydratase family 37 552 1.4E-172 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A1288 369fdf2e8e21bb95e59d48ffeda44168 570 SUPERFAMILY SSF143975 3 371 2.62E-117 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A1288 369fdf2e8e21bb95e59d48ffeda44168 570 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 120 130 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VIBNI_A1959 777373a3336e08167c49cb6a49b957df 106 SUPERFAMILY SSF117782 1 105 1.31E-38 T 15-10-2018 IPR035439 UPF0145 domain superfamily VIBNI_A1959 777373a3336e08167c49cb6a49b957df 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.857 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 VIBNI_A1959 777373a3336e08167c49cb6a49b957df 106 Gene3D G3DSA:3.30.110.70 1 106 7.5E-35 T 15-10-2018 VIBNI_A1959 777373a3336e08167c49cb6a49b957df 106 Pfam PF01906 Putative heavy-metal-binding 1 103 3.3E-39 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 Gene3D G3DSA:3.30.70.20 447 541 1.3E-31 T 15-10-2018 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 Gene3D G3DSA:3.50.50.60 5 382 4.6E-176 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 SUPERFAMILY SSF51905 3 444 9.43E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 Gene3D G3DSA:3.30.9.90 77 446 4.6E-176 T 15-10-2018 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 55 3.8E-5 T 15-10-2018 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 SUPERFAMILY SSF54373 209 305 6.67E-29 T 15-10-2018 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 544 9.5E-43 T 15-10-2018 VIBNI_B0449 f4e2ec6ea272013a15da82fb9153d6e9 546 SUPERFAMILY SSF54862 446 544 5.71E-23 T 15-10-2018 VIBNI_B0085 0c28f9565fd7d4a8b23a61c95e550b72 406 SUPERFAMILY SSF53850 19 404 1.14E-72 T 15-10-2018 VIBNI_B0085 0c28f9565fd7d4a8b23a61c95e550b72 406 Gene3D G3DSA:3.40.190.10 138 395 6.4E-77 T 15-10-2018 VIBNI_B0085 0c28f9565fd7d4a8b23a61c95e550b72 406 Gene3D G3DSA:3.40.190.10 43 346 6.4E-77 T 15-10-2018 VIBNI_B0085 0c28f9565fd7d4a8b23a61c95e550b72 406 Pfam PF01547 Bacterial extracellular solute-binding protein 38 322 7.9E-43 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 SUPERFAMILY SSF55347 196 304 2.22E-34 T 15-10-2018 VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 Gene3D G3DSA:3.30.360.10 196 305 1.1E-120 T 15-10-2018 VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 Pfam PF01658 Myo-inositol-1-phosphate synthase 197 305 1.9E-31 T 15-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 PIRSF PIRSF015578 1 373 6.7E-84 T 15-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 SUPERFAMILY SSF51735 3 359 2.71E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3473 08bef82eab32934ba72f2fc26ec31c2b 375 Gene3D G3DSA:3.40.50.720 4 358 1.1E-120 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82693 148 309 2.33E-5 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.9E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Pfam PF00873 AcrB/AcrD/AcrF family 4 994 9.2E-166 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82714 692 773 7.72E-12 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.70.1430 41 785 1.6E-241 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82693 42 130 1.69E-18 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.70.1320 135 325 1.6E-241 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82866 313 485 2.09E-30 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:1.20.1640.10 11 498 1.6E-241 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82714 182 265 2.22E-12 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.70.1440 639 835 1.6E-241 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.2090.10 690 777 1.6E-241 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2672 31cd604498278cf186257f103506819d 1006 SUPERFAMILY SSF82866 774 998 2.09E-42 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.2090.10 177 268 1.6E-241 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:3.30.70.1430 550 638 1.6E-241 T 15-10-2018 VIBNI_A2672 31cd604498278cf186257f103506819d 1006 Gene3D G3DSA:1.20.1640.10 499 992 1.6E-241 T 15-10-2018 VIBNI_A1296 42f1d8cb8d79bf4ee6ce67e07052fb88 260 Gene3D G3DSA:3.30.460.10 10 103 2.0E-6 T 15-10-2018 VIBNI_A1296 42f1d8cb8d79bf4ee6ce67e07052fb88 260 SUPERFAMILY SSF81301 39 86 1.02E-8 T 15-10-2018 VIBNI_A1296 42f1d8cb8d79bf4ee6ce67e07052fb88 260 Pfam PF01909 Nucleotidyltransferase domain 41 81 2.9E-5 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 Gene3D G3DSA:2.40.70.10 45 179 9.4E-16 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 SUPERFAMILY SSF50630 43 162 1.39E-10 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 60 71 - T 15-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 Gene3D G3DSA:2.30.42.10 334 394 1.3E-7 T 15-10-2018 VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 SUPERFAMILY SSF50156 342 393 1.05E-6 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 Gene3D G3DSA:2.40.70.10 193 309 5.6E-5 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A1725 2be737dccaad92b862a193552edfabfb 394 Pfam PF13650 Aspartyl protease 49 156 3.1E-12 T 15-10-2018 VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 195 212 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 237 255 1.4E-34 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 Gene3D G3DSA:2.120.10.30 1 289 1.9E-94 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 SUPERFAMILY SSF63829 6 283 1.8E-63 T 15-10-2018 VIBNI_B0430 534be45df0210f5bf9fc4edf7b6b85f1 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 15 255 2.5E-74 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region VIBNI_B0094 a0574c14c4aedd7c6945d380ce9c9e4e 207 SUPERFAMILY SSF53474 3 193 3.97E-15 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1262 5041cabaa398504897ff0e476f487938 152 Gene3D G3DSA:1.20.120.1630 5 152 9.3E-29 T 15-10-2018 VIBNI_A1262 5041cabaa398504897ff0e476f487938 152 Pfam PF04191 Phospholipid methyltransferase 37 139 4.1E-19 T 15-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VIBNI_A1262 5041cabaa398504897ff0e476f487938 152 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 107 152 1.0E-7 T 15-10-2018 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 SUPERFAMILY SSF51161 8 260 3.33E-63 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 SMART SM00971 9 113 1.7E-58 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 5.8E-38 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 PIRSF PIRSF000441 76 267 2.6E-57 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 PIRSF PIRSF000441 7 69 400.0 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 Gene3D G3DSA:2.160.10.10 143 273 2.1E-37 T 15-10-2018 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.4E-74 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A3624 30cf89396e53c94f2cbbc66a13a552f4 273 Gene3D G3DSA:1.10.3130.10 1 142 5.9E-52 T 15-10-2018 VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 SUPERFAMILY SSF51735 3 242 4.78E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 5.5E-59 T 15-10-2018 VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 Gene3D G3DSA:3.40.50.720 1 243 1.7E-77 T 15-10-2018 VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 185 0.0019 T 15-10-2018 VIBNI_A1149 99b6a5fc4c82e5b870da078f298fc208 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 Gene3D G3DSA:3.40.640.10 61 334 2.0E-194 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 96.52 T 15-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 Pfam PF01212 Beta-eliminating lyase 49 437 2.1E-88 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 Gene3D G3DSA:3.90.1150.10 10 468 2.0E-194 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 PIRSF PIRSF001386 3 472 7.3E-205 T 15-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 SUPERFAMILY SSF53383 6 470 3.48E-124 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 470 1.3E-292 T 15-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VIBNI_A0261 ec58e88bdb0df611ad44521e5d86e8b8 486 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 15-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 SUPERFAMILY SSF103088 316 432 1.31E-29 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 Gene3D G3DSA:3.30.1330.60 289 436 1.2E-43 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 Gene3D G3DSA:1.25.40.590 54 212 6.3E-46 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 Pfam PF09850 Type VI secretion system protein DotU 58 259 2.5E-57 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 56 265 1.4E-62 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 296 432 2.4E-48 T 15-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain VIBNI_A1430 9106a74c7e2522661b9d512706aec7d8 444 Pfam PF00691 OmpA family 328 426 1.0E-16 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 SUPERFAMILY SSF52283 1 174 6.72E-53 T 15-10-2018 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 PIRSF PIRSF000203 1 516 8.7E-273 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 7.2E-74 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 15-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 Gene3D G3DSA:3.40.50.720 143 324 7.8E-158 T 15-10-2018 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 SMART SM01003 4 143 8.2E-70 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 Gene3D G3DSA:3.40.50.720 3 371 7.8E-158 T 15-10-2018 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 SMART SM01002 152 317 1.2E-81 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 1.3E-47 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 6.6E-276 T 15-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 6.1E-36 T 15-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VIBNI_B1146 89ca38cea775410dc2c26c3e1a35263e 517 SUPERFAMILY SSF51735 143 321 1.68E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Gene3D G3DSA:3.40.50.300 339 811 9.6E-196 T 15-10-2018 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 PIRSF PIRSF000980 1 1152 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 SUPERFAMILY SSF52540 2 351 2.04E-123 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Gene3D G3DSA:3.40.50.10930 4 321 1.2E-126 T 15-10-2018 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Gene3D G3DSA:1.10.10.160 79 187 1.2E-126 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 SUPERFAMILY SSF52540 371 811 9.56E-104 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 809 4.0E-303 T 15-10-2018 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1151 20.769 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Gene3D G3DSA:1.10.10.990 872 949 1.6E-15 T 15-10-2018 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1113 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 Gene3D G3DSA:1.10.486.10 457 668 9.6E-196 T 15-10-2018 VIBNI_A0545 f78d8ad7eb720e030334829694c8a782 1153 SUPERFAMILY SSF52980 834 1136 5.9E-73 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A0259 b8901b2e506eca1662ef5d05b1c78fc2 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 1.5E-38 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_A0259 b8901b2e506eca1662ef5d05b1c78fc2 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 8.4E-44 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VIBNI_A0259 b8901b2e506eca1662ef5d05b1c78fc2 127 Gene3D G3DSA:3.30.1330.40 1 127 1.2E-42 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A0259 b8901b2e506eca1662ef5d05b1c78fc2 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 122 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VIBNI_A0259 b8901b2e506eca1662ef5d05b1c78fc2 127 SUPERFAMILY SSF55298 2 126 1.04E-40 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3353 7015a7145969dfc46219f791b185aff4 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.2E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3353 7015a7145969dfc46219f791b185aff4 208 Gene3D G3DSA:1.10.357.10 53 207 1.6E-36 T 15-10-2018 VIBNI_A3353 7015a7145969dfc46219f791b185aff4 208 SUPERFAMILY SSF46689 2 77 2.32E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3353 7015a7145969dfc46219f791b185aff4 208 Gene3D G3DSA:1.10.10.60 2 52 3.0E-23 T 15-10-2018 VIBNI_A3353 7015a7145969dfc46219f791b185aff4 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 SMART SM01103 3 86 2.9E-41 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.7E-21 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 SUPERFAMILY SSF75471 1 93 1.44E-29 T 15-10-2018 IPR035920 YhbY-like superfamily VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 Gene3D G3DSA:3.30.110.60 1 98 8.3E-37 T 15-10-2018 IPR035920 YhbY-like superfamily VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-40 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VIBNI_A2806 7f873a5a30ac72cf77a7165a75dab24b 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.1E-36 T 15-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VIBNI_A2335 2bfa636b400e17d9b6e0887aa5979510 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 3.0E-85 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VIBNI_A2335 2bfa636b400e17d9b6e0887aa5979510 226 SUPERFAMILY SSF52540 5 223 1.02E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2335 2bfa636b400e17d9b6e0887aa5979510 226 Pfam PF02224 Cytidylate kinase 8 221 3.4E-77 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VIBNI_A2335 2bfa636b400e17d9b6e0887aa5979510 226 Gene3D G3DSA:3.40.50.300 2 226 1.7E-82 T 15-10-2018 VIBNI_A2335 2bfa636b400e17d9b6e0887aa5979510 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.523 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VIBNI_B0998 ddca46d2f33a13be8476d74e9f1aa8b7 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B0998 ddca46d2f33a13be8476d74e9f1aa8b7 308 Pfam PF00294 pfkB family carbohydrate kinase 4 297 4.4E-46 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B0998 ddca46d2f33a13be8476d74e9f1aa8b7 308 SUPERFAMILY SSF53613 1 305 1.56E-67 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B0998 ddca46d2f33a13be8476d74e9f1aa8b7 308 Gene3D G3DSA:3.40.1190.20 2 307 8.9E-73 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 1.6E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 Gene3D G3DSA:3.90.180.10 11 369 1.0E-151 T 15-10-2018 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 1.5E-225 T 15-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 Pfam PF00107 Zinc-binding dehydrogenase 202 325 2.9E-24 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 SUPERFAMILY SSF51735 165 339 1.1E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 Gene3D G3DSA:3.40.50.720 179 317 1.0E-151 T 15-10-2018 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 SMART SM00829 15 372 0.0021 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 SUPERFAMILY SSF50129 323 374 1.98E-11 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0638 2378a7415a6448ddef74fe0a151ed0ce 376 SUPERFAMILY SSF50129 4 190 5.01E-73 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A3459 533dfda805d12b01ccd7ee6187a741a3 279 Gene3D G3DSA:3.40.50.150 1 279 1.2E-116 T 15-10-2018 VIBNI_A3459 533dfda805d12b01ccd7ee6187a741a3 279 SUPERFAMILY SSF53335 9 273 3.82E-97 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3459 533dfda805d12b01ccd7ee6187a741a3 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 4.1E-115 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VIBNI_A3459 533dfda805d12b01ccd7ee6187a741a3 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.463 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 Gene3D G3DSA:1.10.10.10 145 211 1.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 SMART SM00421 150 207 2.2E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 Gene3D G3DSA:3.40.50.2300 2 142 8.7E-36 T 15-10-2018 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 3.3E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.7E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.7E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.7E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1633 8123b4c658a4d9506ea26ce82c912036 217 SUPERFAMILY SSF46894 137 209 7.48E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 PIRSF PIRSF006305 1 193 1.2E-44 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 SUPERFAMILY SSF52972 3 187 2.49E-57 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.848 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 1.7E-56 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 Pfam PF02545 Maf-like protein 6 187 7.4E-46 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 VIBNI_A2368 55586111854616cf4f94ef917393dac0 193 Gene3D G3DSA:3.90.950.10 5 193 1.1E-60 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.4E-38 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 SUPERFAMILY SSF46977 444 582 1.96E-43 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 PIRSF PIRSF000171 1 577 1.2E-47 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.4E-236 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 15-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Gene3D G3DSA:4.10.80.40 543 577 1.9E-14 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.9E-9 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-9 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Gene3D G3DSA:3.50.50.60 7 409 1.0E-161 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Gene3D G3DSA:3.90.700.10 237 363 1.0E-161 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Gene3D G3DSA:1.20.58.100 424 538 3.2E-35 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 SUPERFAMILY SSF51905 2 442 2.6E-75 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 SUPERFAMILY SSF56425 227 358 3.74E-41 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 Pfam PF00890 FAD binding domain 7 397 3.9E-114 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 15-10-2018 VIBNI_A3236 02315aec2daadd6d273fc6386ce9a748 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 15-10-2018 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 206 1.1E-77 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 15-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 SUPERFAMILY SSF51569 3 207 2.2E-66 T 15-10-2018 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 Pfam PF01081 KDPG and KHG aldolase 8 198 7.5E-71 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B1783 c37fdbab73a1bf7c7624e50d0686c837 210 Gene3D G3DSA:3.20.20.70 1 209 4.7E-72 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 2.3E-9 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 2.3E-9 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 2.3E-9 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 176 4.2E-42 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 Gene3D G3DSA:2.40.100.10 18 179 2.7E-58 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 SUPERFAMILY SSF50891 20 178 1.61E-52 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 PIRSF PIRSF001467 9 179 2.7E-25 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VIBNI_A0561 839d324d8afb68206d3d29dfdb002de8 180 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VIBNI_B2094 ffcd5b6c6e5d1d2e2e8c7983aeba7907 147 Gene3D G3DSA:3.40.630.30 1 145 4.5E-19 T 15-10-2018 VIBNI_B2094 ffcd5b6c6e5d1d2e2e8c7983aeba7907 147 Pfam PF13673 Acetyltransferase (GNAT) domain 27 145 4.5E-31 T 15-10-2018 IPR000182 GNAT domain VIBNI_B2094 ffcd5b6c6e5d1d2e2e8c7983aeba7907 147 SUPERFAMILY SSF55729 1 143 5.49E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 8.9E-160 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 SUPERFAMILY SSF50156 387 455 2.5E-14 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 444 9.6E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Gene3D G3DSA:2.40.10.120 38 262 5.8E-83 T 15-10-2018 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 SUPERFAMILY SSF50156 250 358 9.98E-24 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 SMART SM00228 268 350 2.0E-16 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 SMART SM00228 375 448 4.3E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.7E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Gene3D G3DSA:2.30.42.10 266 362 1.4E-26 T 15-10-2018 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Gene3D G3DSA:2.30.42.10 363 456 4.6E-28 T 15-10-2018 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 2.2E-31 T 15-10-2018 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 Pfam PF13180 PDZ domain 270 359 1.2E-15 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A0204 8f7efcc8db2d2c94e03f57f71387bdff 456 SUPERFAMILY SSF50494 23 277 1.97E-62 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 SUPERFAMILY SSF55681 5 320 1.95E-105 T 15-10-2018 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 Pfam PF03129 Anticodon binding domain 342 419 7.5E-10 T 15-10-2018 IPR004154 Anticodon-binding VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 Gene3D G3DSA:3.40.50.800 326 422 3.2E-26 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 3.9E-160 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 SUPERFAMILY SSF52954 328 422 2.13E-26 T 15-10-2018 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.7E-47 T 15-10-2018 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 PIRSF PIRSF001549 2 422 3.2E-128 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 34.132 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VIBNI_A2774 6fbc66d21ab35b97c344581c6373ce07 422 Gene3D G3DSA:3.30.930.10 2 324 7.4E-121 T 15-10-2018 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 SUPERFAMILY SSF48179 277 474 9.52E-41 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 PRINTS PR00084 Mannitol dehydrogenase signature 212 225 4.2E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 PRINTS PR00084 Mannitol dehydrogenase signature 242 257 4.2E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 PRINTS PR00084 Mannitol dehydrogenase signature 20 30 4.2E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 PRINTS PR00084 Mannitol dehydrogenase signature 173 186 4.2E-18 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 19 182 5.2E-30 T 15-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 SUPERFAMILY SSF51735 8 275 5.9E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 212 224 - T 15-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 Gene3D G3DSA:1.10.1040.10 276 479 1.9E-47 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 Gene3D G3DSA:3.40.50.720 5 275 1.2E-91 T 15-10-2018 VIBNI_B2043 e610ea249418ae7ab98051ad6c4a2a0e 485 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 211 428 2.2E-62 T 15-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 SUPERFAMILY SSF50104 125 181 4.21E-19 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 9.4E-22 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 9.4E-22 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 9.4E-22 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 SMART SM00739 127 154 4.8E-5 T 15-10-2018 IPR005824 KOW VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.476 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 SUPERFAMILY SSF82679 6 116 3.92E-40 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 Gene3D G3DSA:3.30.70.940 1 122 2.6E-47 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 Pfam PF00467 KOW motif 131 160 3.7E-7 T 15-10-2018 IPR005824 KOW VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 Gene3D G3DSA:2.30.30.30 123 181 4.6E-25 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 3.3E-70 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.3E-27 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A3332 6ca93fca3a6f65ee470482961392e888 182 SMART SM00738 6 115 1.2E-50 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_B1901 c76160e4adf5ae85867bcbea48cc56d0 489 Gene3D G3DSA:3.50.50.60 76 437 1.6E-63 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1901 c76160e4adf5ae85867bcbea48cc56d0 489 Pfam PF01266 FAD dependent oxidoreductase 76 436 6.2E-48 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_B1901 c76160e4adf5ae85867bcbea48cc56d0 489 Gene3D G3DSA:3.30.9.10 169 396 1.6E-63 T 15-10-2018 VIBNI_B1901 c76160e4adf5ae85867bcbea48cc56d0 489 SUPERFAMILY SSF51905 75 468 1.55E-41 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Gene3D G3DSA:3.30.559.10 178 419 6.7E-80 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Pfam PF02817 e3 binding domain 133 166 1.1E-8 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Gene3D G3DSA:4.10.320.10 128 173 6.9E-12 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 189 417 4.3E-77 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 SUPERFAMILY SSF52777 187 417 2.85E-76 T 15-10-2018 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Pfam PF00364 Biotin-requiring enzyme 6 75 2.8E-17 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 Gene3D G3DSA:2.40.50.100 3 89 8.5E-21 T 15-10-2018 VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 SUPERFAMILY SSF51230 3 83 1.28E-21 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0970 56bc96902b29ee7474fa1df573a2e2c3 424 SUPERFAMILY SSF47005 128 171 4.32E-8 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 Gene3D G3DSA:3.10.420.10 3 158 1.6E-57 T 15-10-2018 IPR035958 SecB-like superfamily VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 SUPERFAMILY SSF54611 4 147 1.33E-51 T 15-10-2018 IPR035958 SecB-like superfamily VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 2.6E-39 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 2.6E-39 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 2.6E-39 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 2.6E-39 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 Pfam PF02556 Preprotein translocase subunit SecB 7 150 4.3E-55 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 151 32.318 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A3627 6e9c0f34f6e12203f4c89a480729aab2 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 151 1.9E-57 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VIBNI_A0514 f4dc6859d917b24029aeddcad02b06c3 68 Pfam PF04964 Flp/Fap pilin component 16 59 9.4E-10 T 15-10-2018 IPR007047 Flp/Fap pilin component VIBNI_A3061 bb73c9466cdf0f19d57057550506aee0 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.288 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VIBNI_A3061 bb73c9466cdf0f19d57057550506aee0 175 Gene3D G3DSA:3.90.80.10 1 175 1.4E-67 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VIBNI_A3061 bb73c9466cdf0f19d57057550506aee0 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.3E-52 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VIBNI_A3061 bb73c9466cdf0f19d57057550506aee0 175 SUPERFAMILY SSF50324 3 174 1.83E-65 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VIBNI_A3061 bb73c9466cdf0f19d57057550506aee0 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 Pfam PF01026 TatD related DNase 3 253 7.1E-81 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 SUPERFAMILY SSF51556 1 253 1.54E-88 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 PIRSF PIRSF005902 1 255 2.5E-81 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 Gene3D G3DSA:3.20.20.140 1 255 1.1E-100 T 15-10-2018 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.1E-95 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VIBNI_A2354 bea3cf4ce9aa1b435c25468edc946a67 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VIBNI_B1383 b536e4c07c057750c5dc1206e8093e7d 306 SUPERFAMILY SSF160964 25 59 1.26E-5 T 15-10-2018 VIBNI_B1383 b536e4c07c057750c5dc1206e8093e7d 306 Gene3D G3DSA:1.10.3720.10 66 305 1.0E-62 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1383 b536e4c07c057750c5dc1206e8093e7d 306 SUPERFAMILY SSF161098 70 292 5.36E-54 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1383 b536e4c07c057750c5dc1206e8093e7d 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 297 3.0E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 SUPERFAMILY SSF74731 2 116 4.32E-50 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 15-10-2018 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.720.90 2 55 3.7E-25 T 15-10-2018 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 Pfam PF00453 Ribosomal protein L20 3 108 5.0E-49 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2086 f07c367ae89d04ef3472f7d055be612a 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 Gene3D G3DSA:3.40.50.300 1 240 2.5E-47 T 15-10-2018 VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 Gene3D G3DSA:3.40.50.300 247 492 6.4E-29 T 15-10-2018 VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 SUPERFAMILY SSF52540 5 230 5.33E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 Pfam PF00005 ABC transporter 277 431 1.6E-13 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 SUPERFAMILY SSF52540 275 481 3.22E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 SMART SM00382 30 222 2.1E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0484 33428ca334d10d51c7b3115e299d6b97 504 Pfam PF00005 ABC transporter 21 174 7.3E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 SUPERFAMILY SSF52540 326 557 5.17E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Gene3D G3DSA:1.10.8.60 489 566 1.7E-12 T 15-10-2018 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 SMART SM00382 336 480 2.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 403 418 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Pfam PF00158 Sigma-54 interaction domain 320 483 3.4E-63 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Gene3D G3DSA:3.40.50.300 304 488 4.2E-59 T 15-10-2018 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Gene3D G3DSA:1.10.10.60 578 628 1.4E-8 T 15-10-2018 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Pfam PF13556 PucR C-terminal helix-turn-helix domain 597 626 1.6E-7 T 15-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 340 353 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 Gene3D G3DSA:3.30.450.40 1 191 4.6E-50 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1713 7bf82f3bb09b506d34381ad2c1e8bb66 631 SUPERFAMILY SSF46689 527 630 2.66E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0616 70a881e1e2deaba14cd6d9bc5df454a6 271 SUPERFAMILY SSF63380 9 132 2.87E-10 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B0616 70a881e1e2deaba14cd6d9bc5df454a6 271 Gene3D G3DSA:2.40.30.10 3 127 3.4E-31 T 15-10-2018 VIBNI_B0616 70a881e1e2deaba14cd6d9bc5df454a6 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 127 2.0E-33 T 15-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VIBNI_B0616 70a881e1e2deaba14cd6d9bc5df454a6 271 Gene3D G3DSA:3.40.50.80 131 270 2.9E-37 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0616 70a881e1e2deaba14cd6d9bc5df454a6 271 Pfam PF04954 Siderophore-interacting protein 134 253 2.5E-31 T 15-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Gene3D G3DSA:3.30.930.10 118 578 3.8E-195 T 15-10-2018 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Pfam PF02938 GAD domain 307 406 1.3E-31 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.1E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.1E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.1E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.1E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.259 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 SUPERFAMILY SSF55261 288 419 3.27E-47 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Gene3D G3DSA:2.40.50.140 1 106 9.4E-36 T 15-10-2018 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 SUPERFAMILY SSF50249 1 105 2.67E-34 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.1E-16 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.4E-265 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Gene3D G3DSA:3.30.1360.30 271 420 3.8E-195 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 SUPERFAMILY SSF55681 108 583 1.74E-101 T 15-10-2018 VIBNI_A2269 8b39fbbe33dbcc41a9afd9f0ed0b5e47 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 4.0E-104 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 8.2E-116 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Gene3D G3DSA:1.10.443.10 114 296 7.7E-73 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 60.432 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 94 6.4E-19 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.704 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Gene3D G3DSA:1.10.150.130 8 102 7.1E-23 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 Pfam PF00589 Phage integrase family 117 288 4.9E-53 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A0317 01e012a704e5d8147bb092ee10db2ec3 302 SUPERFAMILY SSF56349 11 295 2.47E-56 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 Gene3D G3DSA:1.10.10.10 1 57 3.8E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 SMART SM01134 74 235 1.4E-68 T 15-10-2018 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 SMART SM00420 7 59 3.2E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 Pfam PF00455 DeoR C terminal sensor domain 76 234 4.3E-53 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 3.4E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 3.4E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 SUPERFAMILY SSF100950 76 235 2.72E-32 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 2.4E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B0999 dc1131ed029efc6d0db5d56f03df1c36 254 SUPERFAMILY SSF46785 5 74 2.29E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1073 6c6570c14c1754abd6d6a05869723b0b 518 Gene3D G3DSA:3.30.750.24 398 517 9.1E-10 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B1073 6c6570c14c1754abd6d6a05869723b0b 518 SUPERFAMILY SSF52091 412 483 6.67E-9 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B1073 6c6570c14c1754abd6d6a05869723b0b 518 Pfam PF00916 Sulfate permease family 6 363 3.2E-90 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VIBNI_A3484 ce826cd447836395ec807e5e46d7ed72 304 Pfam PF00248 Aldo/keto reductase family 20 294 8.2E-52 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain VIBNI_A3484 ce826cd447836395ec807e5e46d7ed72 304 SUPERFAMILY SSF51430 22 302 1.7E-65 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A3484 ce826cd447836395ec807e5e46d7ed72 304 Gene3D G3DSA:3.20.20.100 8 304 2.8E-88 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 8.1E-81 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 SUPERFAMILY SSF64005 9 234 2.49E-88 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 Gene3D G3DSA:3.40.1180.10 1 239 1.8E-93 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.62 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 238 4.0E-95 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VIBNI_A2500 a31f2e84f4615285806825607ad3d55d 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 Gene3D G3DSA:3.40.50.620 9 222 2.3E-66 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 39 249 8.7E-90 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 27 248 1.6E-94 T 15-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 225 1.8E-50 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 15 249 40.57 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 PIRSF PIRSF000857 3 254 9.4E-59 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VIBNI_A3505 397938d46149e3887faf09ca5d8bddaa 259 SUPERFAMILY SSF52402 27 214 5.86E-56 T 15-10-2018 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 123 156 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 Gene3D G3DSA:3.40.1010.10 42 158 2.2E-41 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 43 277 2.4E-84 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 SUPERFAMILY SSF53790 42 282 3.53E-67 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 Gene3D G3DSA:3.30.950.10 159 286 3.3E-34 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_B0162 1c408652da33f9cb76d402344c389c93 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 46 252 9.4E-41 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A1351 8c13f0045b8536ea95f594ca0f298644 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 38 169 9.3E-19 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B1837 0a76152f60cec821f23cecc978f128b0 264 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_B1837 0a76152f60cec821f23cecc978f128b0 264 Gene3D G3DSA:3.40.30.10 94 264 1.4E-33 T 15-10-2018 VIBNI_B1837 0a76152f60cec821f23cecc978f128b0 264 SUPERFAMILY SSF52833 96 260 1.98E-30 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1837 0a76152f60cec821f23cecc978f128b0 264 Pfam PF13462 Thioredoxin 103 261 1.8E-17 T 15-10-2018 IPR012336 Thioredoxin-like fold VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.3E-13 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 SUPERFAMILY SSF56645 121 356 1.83E-42 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Gene3D G3DSA:1.10.540.10 123 236 5.2E-100 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 8.6E-113 T 15-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Gene3D G3DSA:2.40.110.10 237 360 5.2E-100 T 15-10-2018 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 9.1E-16 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 SUPERFAMILY SSF47203 361 508 3.06E-23 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VIBNI_A2474 aca6e46c5ee4c3386a63b03f4d5b23e1 815 Gene3D G3DSA:1.20.140.10 361 508 5.2E-100 T 15-10-2018 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 Pfam PF01048 Phosphorylase superfamily 15 220 1.9E-40 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.0E-118 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 Gene3D G3DSA:3.40.50.1580 1 237 4.7E-76 T 15-10-2018 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 SUPERFAMILY SSF53167 3 234 2.62E-92 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VIBNI_A0496 9ebd58fa8afb7a6c87a3126ca7befa42 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.331 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:3.30.70.380 708 801 1.2E-29 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.7E-276 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Pfam PF03483 B3/4 domain 212 385 1.3E-71 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SUPERFAMILY SSF46955 404 475 9.16E-20 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SMART SM00873 212 385 3.3E-100 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.0E-26 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.774 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:2.40.50.140 39 154 3.2E-70 T 15-10-2018 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.2E-18 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SMART SM00896 707 800 6.3E-45 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:3.30.930.10 486 697 2.6E-58 T 15-10-2018 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:3.30.56.10 7 179 3.2E-70 T 15-10-2018 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SMART SM00874 403 471 2.0E-29 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:3.50.40.10 197 395 1.0E-83 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SUPERFAMILY SSF56037 195 394 1.02E-77 T 15-10-2018 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Gene3D G3DSA:3.30.56.10 401 475 7.0E-26 T 15-10-2018 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SUPERFAMILY SSF50249 38 195 9.06E-48 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SUPERFAMILY SSF54991 703 800 3.14E-30 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.8E-28 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VIBNI_A1403 23577fef8e412af090585a0637a4dec4 801 SUPERFAMILY SSF55681 467 695 2.48E-48 T 15-10-2018 VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 SUPERFAMILY SSF55073 262 412 8.63E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 SMART SM00267 246 413 5.7E-53 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 412 2.3E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 409 3.2E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 SUPERFAMILY SSF49785 25 193 6.04E-6 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A1142 6b25d62dc60d62e116431e77784e5e76 415 Gene3D G3DSA:3.30.70.270 242 413 1.5E-50 T 15-10-2018 VIBNI_A2079 5581226297272cfdb404c325c95df195 147 Gene3D G3DSA:3.40.630.30 2 140 1.4E-37 T 15-10-2018 VIBNI_A2079 5581226297272cfdb404c325c95df195 147 SUPERFAMILY SSF55729 1 145 5.75E-34 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2079 5581226297272cfdb404c325c95df195 147 Pfam PF00583 Acetyltransferase (GNAT) family 25 134 9.5E-18 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 Pfam PF00704 Glycosyl hydrolases family 18 45 451 3.2E-63 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 Gene3D G3DSA:3.20.20.80 36 479 8.9E-117 T 15-10-2018 VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 Gene3D G3DSA:2.10.10.20 523 578 8.5E-8 T 15-10-2018 VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 SMART SM00495 528 577 4.6E-4 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 SUPERFAMILY SSF51445 45 454 1.41E-66 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 SUPERFAMILY SSF51055 527 575 4.05E-6 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 Gene3D G3DSA:3.10.50.10 29 425 8.9E-117 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily VIBNI_B1818 e5f7464512627db7ce774dcc8635608f 578 SMART SM00636 43 451 3.5E-60 T 15-10-2018 IPR011583 Chitinase II GO:0008061 VIBNI_A3121 fa02992efc5de07cdaa394e6cd0d8fd6 136 SUPERFAMILY SSF89946 6 126 6.15E-40 T 15-10-2018 IPR036701 RraB-like superfamily VIBNI_A3121 fa02992efc5de07cdaa394e6cd0d8fd6 136 Pfam PF06877 Regulator of ribonuclease activity B 18 120 1.3E-33 T 15-10-2018 IPR009671 Regulator of ribonuclease activity B domain VIBNI_A3121 fa02992efc5de07cdaa394e6cd0d8fd6 136 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.249 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B VIBNI_A3121 fa02992efc5de07cdaa394e6cd0d8fd6 136 PIRSF PIRSF018193 8 136 1.8E-59 T 15-10-2018 IPR016716 Regulator of ribonuclease activity B VIBNI_A3121 fa02992efc5de07cdaa394e6cd0d8fd6 136 Gene3D G3DSA:3.30.70.970 1 132 3.0E-58 T 15-10-2018 IPR036701 RraB-like superfamily VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SUPERFAMILY SSF49313 1087 1178 3.0E-14 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:3.40.50.410 2399 2555 3.4E-23 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2773 2791 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Pfam PF13519 von Willebrand factor type A domain 2411 2526 6.6E-12 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 PRINTS PR00313 NodO calcium binding signature 2759 2767 1.1E-6 T 15-10-2018 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 PRINTS PR00313 NodO calcium binding signature 2688 2699 1.1E-6 T 15-10-2018 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 PRINTS PR00313 NodO calcium binding signature 2777 2785 1.1E-6 T 15-10-2018 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 PRINTS PR00313 NodO calcium binding signature 2786 2795 1.1E-6 T 15-10-2018 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SMART SM00327 2408 2676 3.3E-11 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:2.60.40.60 1078 1172 9.9E-16 T 15-10-2018 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Pfam PF00028 Cadherin domain 1087 1168 8.5E-11 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2177 2195 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SUPERFAMILY SSF51120 2123 2263 5.58E-8 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2782 2800 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:2.150.10.10 2741 2890 2.0E-21 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SUPERFAMILY SSF53300 2394 2659 2.34E-22 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:2.60.40.10 274 373 1.0E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:2.60.40.10 488 576 3.0E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SUPERFAMILY SSF51120 2684 2878 1.57E-19 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 801 895 2.2E-12 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 507 595 1.4E-6 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 699 792 2.1E-20 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 903 995 3.4E-18 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 598 691 7.7E-9 T 15-10-2018 IPR010221 VCBS repeat VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2814 2885 7.3E-8 T 15-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SMART SM00112 510 583 2.1 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SMART SM00112 1102 1177 1.2E-15 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 SMART SM00112 601 681 0.59 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 ProSitePatterns PS00018 EF-hand calcium-binding domain. 283 295 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site VIBNI_A1817 dc126399eb3e7c86c73fa6c19b1e49d0 2895 Gene3D G3DSA:2.150.10.10 2151 2287 3.0E-8 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_B1039 b412a8f90bdffc1d89815da614660d57 172 SUPERFAMILY SSF55811 22 142 4.2E-21 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_B1039 b412a8f90bdffc1d89815da614660d57 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_B1039 b412a8f90bdffc1d89815da614660d57 172 Pfam PF00293 NUDIX domain 23 150 7.3E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B1039 b412a8f90bdffc1d89815da614660d57 172 Gene3D G3DSA:3.90.79.10 13 151 2.5E-25 T 15-10-2018 VIBNI_B2082 da7d95acdde0ad64297d639dd84ae2e3 268 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 12 265 5.0E-100 T 15-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family VIBNI_B2082 da7d95acdde0ad64297d639dd84ae2e3 268 SUPERFAMILY SSF51366 2 266 4.71E-22 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_B2082 da7d95acdde0ad64297d639dd84ae2e3 268 Pfam PF03437 BtpA family 11 264 3.1E-92 T 15-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family VIBNI_B2082 da7d95acdde0ad64297d639dd84ae2e3 268 PIRSF PIRSF005956 2 268 2.0E-77 T 15-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family VIBNI_B2082 da7d95acdde0ad64297d639dd84ae2e3 268 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 35 206 6.0E-73 T 15-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 Gene3D G3DSA:1.10.10.10 12 83 8.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 SMART SM00345 23 82 1.6E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 Gene3D G3DSA:3.40.1410.10 91 243 1.7E-26 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 SMART SM00866 100 238 1.3E-18 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 SUPERFAMILY SSF64288 70 243 3.93E-35 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 Pfam PF07702 UTRA domain 102 235 1.8E-26 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 1.9E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A3795 6338b7432259a3df601f0a48fba6fe0d 244 SUPERFAMILY SSF46785 14 86 1.27E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1483 dd2838b5d128146a9ef9fd401ef96ced 281 Gene3D G3DSA:3.40.50.720 107 255 1.8E-38 T 15-10-2018 VIBNI_B1483 dd2838b5d128146a9ef9fd401ef96ced 281 Pfam PF13478 XdhC Rossmann domain 108 250 2.5E-37 T 15-10-2018 IPR027051 XdhC Rossmann domain VIBNI_B1483 dd2838b5d128146a9ef9fd401ef96ced 281 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 251 8.5E-88 T 15-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC VIBNI_B1483 dd2838b5d128146a9ef9fd401ef96ced 281 Pfam PF02625 XdhC and CoxI family 15 74 2.7E-16 T 15-10-2018 IPR003777 XdhC- CoxI VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 2.5E-38 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 SUPERFAMILY SSF46911 3 74 3.66E-30 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.4E-19 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.4E-19 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.4E-19 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.4E-19 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 Gene3D G3DSA:4.10.640.10 20 75 1.1E-29 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 15-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 Pfam PF01084 Ribosomal protein S18 19 68 3.0E-26 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3550 84dbd0c869bdbe4e29abb3925b6d384f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.803 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2639 c3d7f1f99e937be352d40871cca78e3f 235 Gene3D G3DSA:2.30.30.910 94 222 9.8E-35 T 15-10-2018 VIBNI_A2639 c3d7f1f99e937be352d40871cca78e3f 235 Gene3D G3DSA:2.60.40.4070 110 196 9.8E-35 T 15-10-2018 VIBNI_A2639 c3d7f1f99e937be352d40871cca78e3f 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 21 85 2.0E-21 T 15-10-2018 IPR005648 Flagellar hook capping protein VIBNI_A2639 c3d7f1f99e937be352d40871cca78e3f 235 Pfam PF13860 FlgD Ig-like domain 120 182 1.9E-18 T 15-10-2018 IPR025965 FlgD Ig-like domain VIBNI_A2639 c3d7f1f99e937be352d40871cca78e3f 235 Pfam PF13861 FlgD Tudor-like domain 93 229 1.3E-14 T 15-10-2018 IPR025963 FlgD Tudor-like domain VIBNI_A1938 c0de3dfeb0c837958419280dbeb8e9d8 149 SUPERFAMILY SSF158682 25 146 1.96E-26 T 15-10-2018 IPR029024 TerB-like VIBNI_A1938 c0de3dfeb0c837958419280dbeb8e9d8 149 Gene3D G3DSA:1.10.3680.10 1 139 7.7E-20 T 15-10-2018 IPR029024 TerB-like VIBNI_A1938 c0de3dfeb0c837958419280dbeb8e9d8 149 Pfam PF05099 Tellurite resistance protein TerB 22 142 2.0E-35 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.4E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 SUPERFAMILY SSF46785 4 117 2.59E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 67 1.0E-13 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 Gene3D G3DSA:1.10.10.10 2 89 7.2E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 Gene3D G3DSA:3.40.190.10 168 269 1.0E-53 T 15-10-2018 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 SUPERFAMILY SSF53850 96 300 1.22E-34 T 15-10-2018 VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 Pfam PF03466 LysR substrate binding domain 95 299 2.1E-37 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0418 c414a95ed7a1129b645751ada62ae3f2 301 Gene3D G3DSA:3.40.190.10 98 297 1.0E-53 T 15-10-2018 VIBNI_A0096 239c3c7d45b2675b7529f4d1be22c2b1 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 177 1.8E-37 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 VIBNI_A0096 239c3c7d45b2675b7529f4d1be22c2b1 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 173 1.9E-11 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 VIBNI_A0096 239c3c7d45b2675b7529f4d1be22c2b1 189 SUPERFAMILY SSF101327 7 176 7.19E-45 T 15-10-2018 IPR036255 YgfB-like superfamily VIBNI_A0096 239c3c7d45b2675b7529f4d1be22c2b1 189 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 187 32.96 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 VIBNI_A0096 239c3c7d45b2675b7529f4d1be22c2b1 189 Gene3D G3DSA:1.20.120.740 4 189 2.5E-50 T 15-10-2018 VIBNI_A2491 fd41fc81e4d4307d2c824ca47c2ca32b 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 381 40.838 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VIBNI_A2491 fd41fc81e4d4307d2c824ca47c2ca32b 382 SUPERFAMILY SSF53756 9 299 1.17E-28 T 15-10-2018 VIBNI_A2491 fd41fc81e4d4307d2c824ca47c2ca32b 382 Pfam PF02684 Lipid-A-disaccharide synthetase 12 376 9.4E-126 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VIBNI_A2491 fd41fc81e4d4307d2c824ca47c2ca32b 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 379 9.0E-135 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 Gene3D G3DSA:2.30.42.10 309 401 1.6E-8 T 15-10-2018 VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 Gene3D G3DSA:2.40.70.10 42 168 1.0E-14 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 Gene3D G3DSA:2.40.70.10 176 306 2.8E-5 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 SUPERFAMILY SSF50156 301 401 1.73E-10 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 Pfam PF13650 Aspartyl protease 58 148 3.2E-15 T 15-10-2018 VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 SMART SM00228 319 395 2.2E-4 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_B1707 366e19005ae71e2a9499f3e62793a687 404 SUPERFAMILY SSF50630 46 128 3.46E-7 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_B0350 4d61a436f2d04fb607f207956aa7614a 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 931 1129 6.3E-59 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VIBNI_B0350 4d61a436f2d04fb607f207956aa7614a 1181 SUPERFAMILY SSF52540 127 282 5.03E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0350 4d61a436f2d04fb607f207956aa7614a 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 25 1177 0.0 T 15-10-2018 IPR017731 Type VI secretion system, IcmF VIBNI_B0350 4d61a436f2d04fb607f207956aa7614a 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 510 824 3.8E-75 T 15-10-2018 IPR009612 ImcF-related VIBNI_B0350 4d61a436f2d04fb607f207956aa7614a 1181 Pfam PF14331 ImcF-related N-terminal domain 202 459 2.0E-77 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain VIBNI_B1814 27baa62f42c50b1c5539e98d53e06abd 336 Pfam PF01757 Acyltransferase family 23 301 5.1E-23 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 SMART SM00881 4 100 6.0E-36 T 15-10-2018 IPR003781 CoA-binding GO:0048037 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.54 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 PIRSF PIRSF001553 1 289 5.5E-135 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 15-10-2018 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 8.0E-147 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 15-10-2018 IPR003781 CoA-binding GO:0048037 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 15-10-2018 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 15-10-2018 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 15-10-2018 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 15-10-2018 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 Gene3D G3DSA:3.40.50.261 124 288 7.0E-76 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 Pfam PF00549 CoA-ligase 151 271 3.2E-22 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2560 fcfc6cffb38dd3117aa6bbb63218630f 290 SUPERFAMILY SSF52210 123 286 9.81E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A1370 6dc2370d0d209ed5a4d2642cae0e1a62 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 5.5E-7 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A1370 6dc2370d0d209ed5a4d2642cae0e1a62 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 5.5E-7 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A1370 6dc2370d0d209ed5a4d2642cae0e1a62 444 SUPERFAMILY SSF161070 6 443 9.55E-113 T 15-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VIBNI_A1370 6dc2370d0d209ed5a4d2642cae0e1a62 444 Pfam PF00209 Sodium:neurotransmitter symporter family 144 443 3.1E-24 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A1370 6dc2370d0d209ed5a4d2642cae0e1a62 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 115 4.9E-21 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0076 5391edf0ec2ddf9fcc68bd5e7b36cdab 399 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 14 375 25.177 T 15-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VIBNI_A0076 5391edf0ec2ddf9fcc68bd5e7b36cdab 399 SUPERFAMILY SSF111342 8 295 1.57E-71 T 15-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VIBNI_A0076 5391edf0ec2ddf9fcc68bd5e7b36cdab 399 Pfam PF01888 CbiD 14 278 5.8E-80 T 15-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VIBNI_A0076 5391edf0ec2ddf9fcc68bd5e7b36cdab 399 PIRSF PIRSF026782 10 380 3.5E-99 T 15-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VIBNI_A0076 5391edf0ec2ddf9fcc68bd5e7b36cdab 399 Gene3D G3DSA:3.30.2110.10 16 192 2.0E-44 T 15-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VIBNI_B0533 f90f8ee3a21ae5b842ab5f3d579df90f 157 Pfam PF08534 Redoxin 4 154 4.1E-40 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VIBNI_B0533 f90f8ee3a21ae5b842ab5f3d579df90f 157 Gene3D G3DSA:3.40.30.10 2 157 1.1E-59 T 15-10-2018 VIBNI_B0533 f90f8ee3a21ae5b842ab5f3d579df90f 157 SUPERFAMILY SSF52833 1 156 1.34E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 PRINTS PR01021 OMPA domain signature 156 178 5.1E-9 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 PRINTS PR01021 OMPA domain signature 201 217 5.1E-9 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 PRINTS PR01021 OMPA domain signature 186 201 5.1E-9 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 SUPERFAMILY SSF103088 148 256 2.49E-28 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 Pfam PF00691 OmpA family 156 250 9.4E-22 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A1489 848e834b95da529d692d48620a3edb37 270 Gene3D G3DSA:3.30.1330.60 124 263 9.3E-27 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 Gene3D G3DSA:3.40.47.10 6 276 1.2E-148 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 Pfam PF00108 Thiolase, N-terminal domain 4 262 8.8E-97 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 Gene3D G3DSA:3.40.47.10 126 398 1.2E-148 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 Pfam PF02803 Thiolase, C-terminal domain 270 399 2.6E-42 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 SUPERFAMILY SSF53901 271 398 5.76E-37 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 6.9E-141 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 SUPERFAMILY SSF53901 4 270 2.13E-83 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 VIBNI_B0465 e126b5f7075b5d7c52f891f861283ef8 402 PIRSF PIRSF000429 1 402 1.1E-128 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_B0569 4679c15261ace3b70bd3d127059005bc 315 Gene3D G3DSA:1.10.3720.10 86 310 2.4E-24 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0569 4679c15261ace3b70bd3d127059005bc 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 314 1.3E-42 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0569 4679c15261ace3b70bd3d127059005bc 315 SUPERFAMILY SSF161098 91 300 2.94E-20 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1601 fe031899ac33fb396b6556af3f17aeb6 402 Gene3D G3DSA:1.10.443.10 238 396 7.2E-13 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A1601 fe031899ac33fb396b6556af3f17aeb6 402 SUPERFAMILY SSF56349 79 396 1.27E-17 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Gene3D G3DSA:1.10.1780.10 1 148 1.0E-28 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SMART SM00382 198 343 2.0E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SMART SM00382 597 748 4.7E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SUPERFAMILY SSF52540 159 545 7.81E-101 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SUPERFAMILY SSF81923 4 156 7.65E-41 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.9E-57 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Gene3D G3DSA:1.10.8.60 766 858 2.8E-26 T 15-10-2018 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Gene3D G3DSA:3.40.50.300 158 347 5.1E-75 T 15-10-2018 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.1E-10 T 15-10-2018 IPR004176 Clp, N-terminal VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.0E-12 T 15-10-2018 IPR004176 Clp, N-terminal VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Gene3D G3DSA:3.40.50.300 348 544 5.4E-66 T 15-10-2018 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 1.8E-13 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.0E-26 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 Gene3D G3DSA:3.40.50.300 550 764 4.7E-90 T 15-10-2018 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SMART SM01086 766 855 1.2E-34 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A0389 13e8814ad7f9e328f6ed6cb0f4adc5aa 858 SUPERFAMILY SSF52540 546 852 2.32E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 Gene3D G3DSA:3.30.1130.10 21 138 9.6E-46 T 15-10-2018 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 PIRSF PIRSF004750 6 281 5.7E-128 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.5E-127 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 3.0E-48 T 15-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 Pfam PF14489 QueF-like protein 194 270 1.7E-26 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 162.258 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 SUPERFAMILY SSF55620 169 267 3.48E-9 T 15-10-2018 VIBNI_A2518 0bd1c19f7c79f932ca1588ca407e91c6 281 Gene3D G3DSA:3.30.1130.10 143 281 5.0E-61 T 15-10-2018 VIBNI_A1139 4a1c8b70b8fd181609e0d05afb895665 215 Gene3D G3DSA:2.60.120.620 1 214 1.1E-53 T 15-10-2018 VIBNI_A1139 4a1c8b70b8fd181609e0d05afb895665 215 Pfam PF10014 2OG-Fe dioxygenase 23 207 6.0E-55 T 15-10-2018 IPR018724 2OG-Fe dioxygenase VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 PIRSF PIRSF000368 1 155 3.9E-58 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 Gene3D G3DSA:3.20.20.70 2 154 4.1E-22 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 4.8E-60 T 15-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.1E-50 T 15-10-2018 VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 SUPERFAMILY SSF102114 23 109 1.83E-8 T 15-10-2018 VIBNI_B1169 5e009c8593d7d1e44319eb1f05ab96bc 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 SUPERFAMILY SSF46785 2 82 2.01E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 Gene3D G3DSA:3.40.190.10 87 288 7.1E-52 T 15-10-2018 VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.9E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 SUPERFAMILY SSF53850 87 291 9.05E-39 T 15-10-2018 VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 Gene3D G3DSA:1.10.10.10 1 86 5.4E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 Gene3D G3DSA:3.40.190.10 167 265 7.1E-52 T 15-10-2018 VIBNI_A1988 d58e5f1ac8c8f71c2da1f89664f72d0f 308 Pfam PF03466 LysR substrate binding domain 92 294 6.2E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2164 efdc5816db433482c1e1ffe8dee78fe5 185 Pfam PF10544 T5orf172 domain 87 173 6.1E-9 T 15-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VIBNI_A2164 efdc5816db433482c1e1ffe8dee78fe5 185 SMART SM00974 95 180 4.7E-4 T 15-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 SUPERFAMILY SSF81301 194 406 6.7E-60 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 SUPERFAMILY SSF55021 662 737 6.87E-11 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 SUPERFAMILY SSF81271 395 462 1.61E-20 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Gene3D G3DSA:3.30.460.10 206 339 5.7E-49 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Pfam PF02824 TGS domain 402 461 3.6E-21 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Pfam PF13328 HD domain 54 189 1.3E-35 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Pfam PF13291 ACT domain 661 737 6.3E-15 T 15-10-2018 IPR002912 ACT domain VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Gene3D G3DSA:1.10.3210.10 50 204 1.2E-35 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Gene3D G3DSA:3.30.70.260 660 739 4.4E-15 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Gene3D G3DSA:3.10.20.30 396 467 2.9E-30 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 Pfam PF04607 Region found in RelA / SpoT proteins 249 358 3.8E-36 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 SMART SM00954 249 359 1.1E-63 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 SUPERFAMILY SSF109604 53 205 4.71E-41 T 15-10-2018 VIBNI_A0126 57945322e3a0803fe6b2bab273a0cfff 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 737 3.6E-181 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 VIBNI_B0248 cadccbd0e80e6683602eb523c0307575 137 Gene3D G3DSA:3.40.630.30 2 132 4.8E-31 T 15-10-2018 VIBNI_B0248 cadccbd0e80e6683602eb523c0307575 137 Pfam PF13508 Acetyltransferase (GNAT) domain 45 119 3.1E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0248 cadccbd0e80e6683602eb523c0307575 137 SUPERFAMILY SSF55729 13 125 3.14E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 8.5E-155 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Pfam PF01493 GXGXG motif 1237 1418 5.9E-73 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Pfam PF04898 Glutamate synthase central domain 459 738 2.0E-101 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Gene3D G3DSA:2.160.20.60 1196 1468 3.9E-100 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 SUPERFAMILY SSF56235 13 429 7.72E-151 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 SUPERFAMILY SSF69336 1213 1465 3.01E-86 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.8E-179 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VIBNI_A0277 c299597ac0a32be4cc6edf2581a715ea 1487 SUPERFAMILY SSF51395 434 1191 1.26E-252 T 15-10-2018 VIBNI_A0920 ea1cfb3f161166b86ee262cfb8600b02 82 Pfam PF02597 ThiS family 5 82 9.3E-20 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VIBNI_A0920 ea1cfb3f161166b86ee262cfb8600b02 82 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 82 5.7E-22 T 15-10-2018 VIBNI_A0920 ea1cfb3f161166b86ee262cfb8600b02 82 Gene3D G3DSA:3.10.20.30 2 82 2.5E-25 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A0920 ea1cfb3f161166b86ee262cfb8600b02 82 SUPERFAMILY SSF54285 2 82 5.05E-22 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VIBNI_A1802 33d18af19c2614a660f8fcedd7ddf24b 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 8.1E-159 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_A1802 33d18af19c2614a660f8fcedd7ddf24b 353 Gene3D G3DSA:3.20.20.70 1 351 1.8E-151 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1802 33d18af19c2614a660f8fcedd7ddf24b 353 Pfam PF00793 DAHP synthetase I family 44 338 6.3E-98 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A1802 33d18af19c2614a660f8fcedd7ddf24b 353 SUPERFAMILY SSF51569 8 348 6.32E-130 T 15-10-2018 VIBNI_A1802 33d18af19c2614a660f8fcedd7ddf24b 353 PIRSF PIRSF001361 2 352 2.9E-154 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Gene3D G3DSA:3.40.50.300 1406 1618 9.5E-31 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Pfam PF13195 Protein of unknown function (DUF4011) 395 568 2.6E-38 T 15-10-2018 IPR025103 Protein of unknown function DUF4011 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Pfam PF13087 AAA domain 1396 1583 7.4E-18 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Pfam PF13086 AAA domain 1323 1367 8.1E-8 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Gene3D G3DSA:3.40.50.300 619 897 6.6E-17 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Gene3D G3DSA:3.40.50.300 1197 1405 9.9E-15 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 SUPERFAMILY SSF52980 1626 1735 5.9E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 Gene3D G3DSA:3.40.960.10 1630 1736 7.2E-18 T 15-10-2018 VIBNI_A1877 9891aadba371aae0adf60978c15358c9 2006 SUPERFAMILY SSF52540 681 1633 3.04E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 Pfam PF07687 Peptidase dimerisation domain 178 273 7.2E-14 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 364 3.4E-134 T 15-10-2018 IPR010162 Peptidase M20B, peptidase T-like VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 Pfam PF01546 Peptidase family M20/M25/M40 72 364 7.2E-17 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 Gene3D G3DSA:3.30.70.360 176 287 9.2E-111 T 15-10-2018 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 PIRSF PIRSF001123 79 179 4.9E-7 T 15-10-2018 IPR008007 Peptidase M42 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 PIRSF PIRSF001123 294 368 0.0027 T 15-10-2018 IPR008007 Peptidase M42 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 PIRSF PIRSF001123 6 105 0.085 T 15-10-2018 IPR008007 Peptidase M42 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 SUPERFAMILY SSF55031 177 288 7.85E-22 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 Gene3D G3DSA:3.40.630.10 16 362 9.2E-111 T 15-10-2018 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_A1594 8ff82be309b40d185957318c62f31dc8 368 SUPERFAMILY SSF53187 5 367 1.44E-52 T 15-10-2018 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 SMART SM00382 32 215 4.3E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 SUPERFAMILY SSF52540 8 247 3.78E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 Gene3D G3DSA:3.40.50.300 7 225 4.4E-69 T 15-10-2018 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 SUPERFAMILY SSF50331 240 361 6.23E-8 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 Pfam PF00005 ABC transporter 24 164 1.3E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 Gene3D G3DSA:2.40.50.940 226 288 6.2E-11 T 15-10-2018 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 361 1.2E-155 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 Gene3D G3DSA:2.40.50.140 289 304 6.2E-11 T 15-10-2018 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 Pfam PF08402 TOBE domain 282 361 9.9E-12 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A1730 1dd908eeb1d2cce4ee0dfcb4533714bd 367 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0206 4c37f936a41d0960d8d6bc9b07dfa3bc 367 Gene3D G3DSA:3.40.50.300 233 358 5.9E-5 T 15-10-2018 VIBNI_A0206 4c37f936a41d0960d8d6bc9b07dfa3bc 367 Pfam PF03969 AFG1-like ATPase 1 364 9.8E-156 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VIBNI_A0206 4c37f936a41d0960d8d6bc9b07dfa3bc 367 SUPERFAMILY SSF52540 61 201 4.05E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0206 4c37f936a41d0960d8d6bc9b07dfa3bc 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.301 T 15-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VIBNI_A0206 4c37f936a41d0960d8d6bc9b07dfa3bc 367 Gene3D G3DSA:3.40.50.300 8 191 1.8E-21 T 15-10-2018 VIBNI_A3148 35607d99fce68175720e497a7b5064f9 190 Pfam PF04225 Opacity-associated protein A LysM-like domain 107 190 1.6E-35 T 15-10-2018 IPR007340 Opacity-associated protein A VIBNI_A3148 35607d99fce68175720e497a7b5064f9 190 Pfam PF08525 Opacity-associated protein A N-terminal motif 37 62 2.1E-6 T 15-10-2018 IPR013731 Opacity-associated protein A, N-terminal VIBNI_A3148 35607d99fce68175720e497a7b5064f9 190 Gene3D G3DSA:3.10.450.350 94 183 1.1E-12 T 15-10-2018 VIBNI_B1123 41e6eb5f28fee33b5be44b99fa02e8b7 308 Gene3D G3DSA:2.40.100.10 179 307 2.5E-41 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1123 41e6eb5f28fee33b5be44b99fa02e8b7 308 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 293 3.8E-81 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B1123 41e6eb5f28fee33b5be44b99fa02e8b7 308 SUPERFAMILY SSF50891 190 292 2.69E-7 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1123 41e6eb5f28fee33b5be44b99fa02e8b7 308 SMART SM00797 25 305 1.6E-128 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B1123 41e6eb5f28fee33b5be44b99fa02e8b7 308 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 288 2.4E-82 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_A3432 185e81f3b44e6d2c74f949f2af2a0b0b 472 Pfam PF00263 Bacterial type II and III secretion system protein 264 424 1.5E-39 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_A3432 185e81f3b44e6d2c74f949f2af2a0b0b 472 PRINTS PR00811 Bacterial general secretion pathway protein D signature 196 206 8.9E-8 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3432 185e81f3b44e6d2c74f949f2af2a0b0b 472 PRINTS PR00811 Bacterial general secretion pathway protein D signature 260 284 8.9E-8 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3432 185e81f3b44e6d2c74f949f2af2a0b0b 472 PRINTS PR00811 Bacterial general secretion pathway protein D signature 389 407 8.9E-8 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3432 185e81f3b44e6d2c74f949f2af2a0b0b 472 Pfam PF13629 Pilus formation protein N terminal region 25 93 1.1E-14 T 15-10-2018 IPR032789 Pilus formation protein, N-terminal VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 Gene3D G3DSA:3.40.190.290 91 288 8.3E-23 T 15-10-2018 VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.3E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 SUPERFAMILY SSF46785 1 109 1.91E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 Pfam PF03466 LysR substrate binding domain 87 272 9.4E-33 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 Gene3D G3DSA:1.10.10.10 1 90 2.1E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1847 e49420dff19796ad1f3f8b282222bd68 299 SUPERFAMILY SSF53850 88 292 1.72E-31 T 15-10-2018 VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 SUPERFAMILY SSF46785 5 76 1.67E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 Gene3D G3DSA:1.10.10.10 1 74 5.0E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 SUPERFAMILY SSF48008 97 235 3.66E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 SMART SM00345 15 74 7.2E-28 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.7E-25 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 Gene3D G3DSA:1.20.120.530 97 236 2.0E-28 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 SMART SM00895 99 227 2.2E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A0180 73e71116349f82e39767d4b0f2bc9679 256 Pfam PF07729 FCD domain 99 226 3.1E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1240 1298a550c3790d74ce35cf6a773f5faa 181 Gene3D G3DSA:3.10.129.10 25 170 9.4E-34 T 15-10-2018 VIBNI_A1240 1298a550c3790d74ce35cf6a773f5faa 181 SUPERFAMILY SSF54637 27 172 2.2E-31 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A1240 1298a550c3790d74ce35cf6a773f5faa 181 Pfam PF01575 MaoC like domain 43 136 3.8E-10 T 15-10-2018 IPR002539 MaoC-like dehydratase domain VIBNI_A0811 761ee29ec00468437e3730d2a17a3e43 367 Gene3D G3DSA:3.40.50.2300 12 152 7.0E-34 T 15-10-2018 VIBNI_A0811 761ee29ec00468437e3730d2a17a3e43 367 SUPERFAMILY SSF52172 18 144 1.71E-34 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0811 761ee29ec00468437e3730d2a17a3e43 367 Gene3D G3DSA:3.60.40.10 164 347 7.3E-12 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A0811 761ee29ec00468437e3730d2a17a3e43 367 SMART SM00448 20 132 6.9E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0811 761ee29ec00468437e3730d2a17a3e43 367 Pfam PF00072 Response regulator receiver domain 22 132 5.2E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3704 65a9849f8b5762e9b19b9025013e9d81 213 SUPERFAMILY SSF53271 2 211 1.42E-49 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A3704 65a9849f8b5762e9b19b9025013e9d81 213 Gene3D G3DSA:3.40.50.2020 1 213 5.3E-79 T 15-10-2018 VIBNI_A3704 65a9849f8b5762e9b19b9025013e9d81 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.4E-70 T 15-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3704 65a9849f8b5762e9b19b9025013e9d81 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.247 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3704 65a9849f8b5762e9b19b9025013e9d81 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 8.2E-13 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Pfam PF00550 Phosphopantetheine attachment site 532 593 1.4E-7 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Gene3D G3DSA:1.10.1200.10 518 599 8.3E-13 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 SUPERFAMILY SSF47336 524 593 9.29E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 493 1.5E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Pfam PF00501 AMP-binding enzyme 18 409 5.4E-95 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Gene3D G3DSA:3.30.300.30 405 505 2.9E-28 T 15-10-2018 VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 38 432 6.9E-122 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 PRINTS PR00154 AMP-binding signature 166 174 3.2E-5 T 15-10-2018 IPR020459 AMP-binding VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 PRINTS PR00154 AMP-binding signature 154 165 3.2E-5 T 15-10-2018 IPR020459 AMP-binding VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 SUPERFAMILY SSF56801 10 541 5.49E-139 T 15-10-2018 VIBNI_A3719 878f11387349dc4a21199b4310976f98 624 Gene3D G3DSA:3.40.50.12780 3 404 5.9E-118 T 15-10-2018 VIBNI_B1507 590c04fb3c71b1acc421a0d3d7c05ded 163 Gene3D G3DSA:3.90.420.10 17 135 2.1E-6 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VIBNI_B1507 590c04fb3c71b1acc421a0d3d7c05ded 163 SUPERFAMILY SSF56524 30 162 2.49E-17 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VIBNI_B1507 590c04fb3c71b1acc421a0d3d7c05ded 163 Pfam PF00174 Oxidoreductase molybdopterin binding domain 29 134 1.1E-7 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 5.7E-15 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 SUPERFAMILY SSF64518 165 624 4.18E-24 T 15-10-2018 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 329 1.5E-59 T 15-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VIBNI_A2632 73e8a05003b454351c62847a17b915ac 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 580 624 2.7E-9 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VIBNI_A0050 c6002e1a90343862c8688e30919acd62 199 SUPERFAMILY SSF52972 1 195 3.66E-74 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A0050 c6002e1a90343862c8688e30919acd62 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 49.929 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VIBNI_A0050 c6002e1a90343862c8688e30919acd62 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 6.7E-65 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VIBNI_A0050 c6002e1a90343862c8688e30919acd62 199 Pfam PF01725 Ham1 family 4 192 9.3E-58 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VIBNI_A0050 c6002e1a90343862c8688e30919acd62 199 Gene3D G3DSA:3.90.950.10 1 199 1.1E-82 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 Pfam PF02277 Phosphoribosyltransferase 2 344 6.4E-125 T 15-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 344 1.0E-125 T 15-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 Gene3D G3DSA:1.10.1610.10 14 344 8.9E-122 T 15-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 SUPERFAMILY SSF52733 2 345 1.23E-108 T 15-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 Gene3D G3DSA:3.40.50.10210 51 327 8.9E-122 T 15-10-2018 VIBNI_A1492 57b6a650d2c08aaff04238c19c017ae7 346 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 346 35.0 T 15-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Gene3D G3DSA:2.160.20.60 1363 1624 2.4E-78 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Gene3D G3DSA:3.20.20.70 437 784 2.9E-92 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 SUPERFAMILY SSF56235 18 425 3.53E-95 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 SUPERFAMILY SSF51395 448 1305 3.26E-159 T 15-10-2018 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Pfam PF00310 Glutamine amidotransferases class-II 18 422 8.3E-91 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 SUPERFAMILY SSF69336 1398 1612 2.75E-64 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Gene3D G3DSA:3.60.20.10 18 435 5.8E-112 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Pfam PF01493 GXGXG motif 1396 1560 8.7E-54 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Pfam PF01645 Conserved region in glutamate synthase 934 1288 7.1E-103 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Gene3D G3DSA:3.20.20.70 968 1304 2.7E-130 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0046 36cb1bdd6119b28b4cbbcee9e0745f05 1818 Pfam PF04898 Glutamate synthase central domain 455 728 4.3E-73 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Pfam PF02355 Protein export membrane protein 436 597 6.8E-20 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Gene3D G3DSA:3.30.70.3400 222 440 5.1E-50 T 15-10-2018 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 4.5E-149 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 9.5E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 9.5E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 9.5E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 SUPERFAMILY SSF82866 413 609 1.07E-44 T 15-10-2018 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Gene3D G3DSA:1.20.1640.10 451 600 2.0E-6 T 15-10-2018 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.6E-81 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.828 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Pfam PF07549 SecD/SecF GG Motif 115 141 3.3E-7 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.9E-36 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain VIBNI_A0427 bf4733e8697bc5b4a73413c33e0dbfd8 618 Gene3D G3DSA:3.30.1360.200 281 434 5.1E-50 T 15-10-2018 VIBNI_B0949 53c223f104612cfa11e88fc087d87593 483 Gene3D G3DSA:2.160.20.10 27 475 2.4E-18 T 15-10-2018 IPR012334 Pectin lyase fold VIBNI_B0949 53c223f104612cfa11e88fc087d87593 483 SUPERFAMILY SSF51126 8 410 1.28E-13 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 Gene3D G3DSA:3.30.390.10 1 122 7.8E-12 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 SUPERFAMILY SSF51604 120 369 1.01E-59 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 Gene3D G3DSA:3.20.20.120 123 371 6.8E-64 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 SUPERFAMILY SSF54826 1 134 1.13E-11 T 15-10-2018 VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 SMART SM00922 148 245 6.3E-15 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_A1250 46a667af48ffae7cdfc0c66bc88eaf05 374 Pfam PF13378 Enolase C-terminal domain-like 152 364 1.1E-47 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 SUPERFAMILY SSF51905 1 364 9.98E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PIRSF PIRSF000350 1 466 1.4E-65 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 458 2.3E-17 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Gene3D G3DSA:3.50.50.60 7 329 6.8E-97 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 2.9E-19 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.9E-19 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.9E-19 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.9E-19 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.9E-19 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.6E-44 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 SUPERFAMILY SSF55424 348 466 3.78E-25 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Gene3D G3DSA:3.50.50.60 147 268 6.8E-97 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Gene3D G3DSA:1.10.287.990 37 107 6.8E-97 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 Gene3D G3DSA:3.30.390.30 346 469 1.6E-41 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 2.3E-41 T 15-10-2018 VIBNI_A3589 a8ee26c0c066e7e0ee4aff7543b3e1db 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.3E-41 T 15-10-2018 VIBNI_A1963 31bd460e970eb7e07dc2418bcb275174 229 SUPERFAMILY SSF48150 39 183 3.61E-37 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_A1963 31bd460e970eb7e07dc2418bcb275174 229 Gene3D G3DSA:1.10.340.30 36 186 4.1E-17 T 15-10-2018 VIBNI_A1963 31bd460e970eb7e07dc2418bcb275174 229 Pfam PF03352 Methyladenine glycosylase 49 139 8.5E-15 T 15-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 SMART SM00257 38 82 4.7E-4 T 15-10-2018 IPR018392 LysM domain VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 Pfam PF01476 LysM domain 39 82 2.9E-7 T 15-10-2018 IPR018392 LysM domain VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 Pfam PF03734 L,D-transpeptidase catalytic domain 94 229 2.8E-23 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 SUPERFAMILY SSF141523 92 229 3.92E-31 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 SUPERFAMILY SSF54106 37 82 6.8E-7 T 15-10-2018 VIBNI_B1749 ca203f98c71f14a51755bb377e188683 299 Gene3D G3DSA:2.40.440.10 18 297 2.1E-86 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VIBNI_B1636 2827d6e6f8d687351690a31d0161723d 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.2E-62 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VIBNI_B1636 2827d6e6f8d687351690a31d0161723d 318 Gene3D G3DSA:1.10.8.300 199 315 7.3E-36 T 15-10-2018 VIBNI_B1636 2827d6e6f8d687351690a31d0161723d 318 Gene3D G3DSA:3.40.50.300 17 183 3.5E-47 T 15-10-2018 VIBNI_B1636 2827d6e6f8d687351690a31d0161723d 318 SUPERFAMILY SSF52540 3 291 1.45E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1636 2827d6e6f8d687351690a31d0161723d 318 PIRSF PIRSF002849 1 318 2.3E-127 T 15-10-2018 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 Gene3D G3DSA:3.40.190.10 95 167 3.8E-8 T 15-10-2018 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.8E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 Gene3D G3DSA:1.10.10.10 3 94 1.1E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 Pfam PF03466 LysR substrate binding domain 92 289 3.3E-19 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 SUPERFAMILY SSF53850 92 291 4.35E-19 T 15-10-2018 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.4E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 SUPERFAMILY SSF46785 5 87 1.26E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0124 c5a4c188e7604eee80f97d6be929069a 293 Gene3D G3DSA:3.40.190.10 168 265 3.8E-8 T 15-10-2018 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 Gene3D G3DSA:3.40.50.1000 11 232 2.9E-59 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 6.6E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 6.6E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 6.6E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 5.9E-14 T 15-10-2018 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 SUPERFAMILY SSF56784 9 238 3.31E-38 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 Gene3D G3DSA:1.20.120.1600 24 110 2.9E-59 T 15-10-2018 VIBNI_A3764 73e600bd2454c80ca34e3a05afe8a529 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 201 2.5E-13 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2661 000f566aee6c6f8f1ca0e63963a63c7b 189 SUPERFAMILY SSF56925 18 189 1.31E-15 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A2661 000f566aee6c6f8f1ca0e63963a63c7b 189 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 181 189 - T 15-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 VIBNI_A2661 000f566aee6c6f8f1ca0e63963a63c7b 189 TIGRFAM TIGR03304 OMP85_target: outer membrane insertion C-terminal signal 180 189 0.075 T 15-10-2018 IPR017690 Outer membrane insertion C-terminal signal, omp85 target VIBNI_A2661 000f566aee6c6f8f1ca0e63963a63c7b 189 Pfam PF13505 Outer membrane protein beta-barrel domain 6 189 4.8E-15 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A2661 000f566aee6c6f8f1ca0e63963a63c7b 189 Gene3D G3DSA:2.40.160.20 18 189 3.7E-13 T 15-10-2018 VIBNI_A0268 193969a778e8af878aa58212c5d9e518 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.8E-101 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0268 193969a778e8af878aa58212c5d9e518 231 SUPERFAMILY SSF53167 1 230 1.57E-73 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VIBNI_A0268 193969a778e8af878aa58212c5d9e518 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.518 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VIBNI_A0268 193969a778e8af878aa58212c5d9e518 231 Pfam PF01048 Phosphorylase superfamily 2 226 1.3E-50 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VIBNI_A0268 193969a778e8af878aa58212c5d9e518 231 Gene3D G3DSA:3.40.50.1580 1 231 2.3E-71 T 15-10-2018 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 SUPERFAMILY SSF51055 435 481 6.28E-9 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 Pfam PF00182 Chitinase class I 106 325 4.7E-30 T 15-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 Gene3D G3DSA:3.30.20.10 178 248 4.8E-76 T 15-10-2018 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 SMART SM00495 439 481 7.6E-5 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 SMART SM00495 497 545 0.7 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 Gene3D G3DSA:1.10.530.10 105 346 4.8E-76 T 15-10-2018 VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 SUPERFAMILY SSF53955 87 350 5.34E-53 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A3560 81e1437380b930278ad8b0c459244646 548 Gene3D G3DSA:2.10.10.20 440 482 1.1E-10 T 15-10-2018 VIBNI_A2743 40ca3c156e118036d00995c35b6a53a7 289 Gene3D G3DSA:3.30.420.40 5 284 3.2E-78 T 15-10-2018 VIBNI_A2743 40ca3c156e118036d00995c35b6a53a7 289 Pfam PF00480 ROK family 4 284 2.8E-61 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A2743 40ca3c156e118036d00995c35b6a53a7 289 SUPERFAMILY SSF53067 1 287 3.77E-51 T 15-10-2018 VIBNI_A2743 40ca3c156e118036d00995c35b6a53a7 289 Gene3D G3DSA:3.30.420.40 120 271 3.2E-78 T 15-10-2018 VIBNI_A2743 40ca3c156e118036d00995c35b6a53a7 289 ProSitePatterns PS01125 ROK family signature. 130 157 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A0721 572887356facd97965d50707e3893302 471 Gene3D G3DSA:3.40.50.2300 1 119 4.1E-34 T 15-10-2018 VIBNI_A0721 572887356facd97965d50707e3893302 471 Gene3D G3DSA:3.40.50.300 120 300 4.4E-65 T 15-10-2018 VIBNI_A0721 572887356facd97965d50707e3893302 471 Gene3D G3DSA:1.10.10.60 403 467 8.3E-11 T 15-10-2018 VIBNI_A0721 572887356facd97965d50707e3893302 471 Gene3D G3DSA:1.10.8.60 302 379 6.3E-30 T 15-10-2018 VIBNI_A0721 572887356facd97965d50707e3893302 471 SMART SM00448 4 115 2.1E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0721 572887356facd97965d50707e3893302 471 SUPERFAMILY SSF52540 137 370 8.77E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0721 572887356facd97965d50707e3893302 471 SUPERFAMILY SSF52172 3 173 7.83E-40 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0721 572887356facd97965d50707e3893302 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A0721 572887356facd97965d50707e3893302 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A0721 572887356facd97965d50707e3893302 471 Pfam PF00158 Sigma-54 interaction domain 134 295 1.6E-65 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A0721 572887356facd97965d50707e3893302 471 Pfam PF00072 Response regulator receiver domain 6 115 3.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0721 572887356facd97965d50707e3893302 471 SMART SM00382 149 296 8.3E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0721 572887356facd97965d50707e3893302 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.8E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0721 572887356facd97965d50707e3893302 471 SUPERFAMILY SSF46689 342 462 3.23E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 Pfam PF00106 short chain dehydrogenase 4 183 1.8E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 Gene3D G3DSA:3.40.50.720 1 239 1.9E-48 T 15-10-2018 VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.0E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2310 afdfd8587c8deb4c4cb45738299feebf 244 SUPERFAMILY SSF51735 2 241 1.44E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1675 31609adf83c11801ad849a6f0cb31005 270 Gene3D G3DSA:3.40.190.10 104 216 2.1E-97 T 15-10-2018 VIBNI_A1675 31609adf83c11801ad849a6f0cb31005 270 Gene3D G3DSA:3.40.190.10 29 253 2.1E-97 T 15-10-2018 VIBNI_A1675 31609adf83c11801ad849a6f0cb31005 270 SUPERFAMILY SSF53850 27 255 8.57E-34 T 15-10-2018 VIBNI_A1675 31609adf83c11801ad849a6f0cb31005 270 Pfam PF12849 PBP superfamily domain 29 245 9.0E-31 T 15-10-2018 IPR024370 PBP domain VIBNI_B0977 46df17bc1323b19ede17167056ff097d 470 Pfam PF00171 Aldehyde dehydrogenase family 11 464 3.7E-146 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B0977 46df17bc1323b19ede17167056ff097d 470 Gene3D G3DSA:3.40.605.10 10 463 1.4E-151 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0977 46df17bc1323b19ede17167056ff097d 470 SUPERFAMILY SSF53720 1 467 1.57E-141 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0977 46df17bc1323b19ede17167056ff097d 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B0977 46df17bc1323b19ede17167056ff097d 470 Gene3D G3DSA:3.40.309.10 248 439 1.4E-151 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 Gene3D G3DSA:3.30.420.80 1 129 6.0E-57 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 Pfam PF00411 Ribosomal protein S11 19 128 2.2E-51 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.712 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 PIRSF PIRSF002131 1 129 1.2E-52 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.2E-54 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3155 ab1cfea7d32719150d0f73542d16c91c 129 SUPERFAMILY SSF53137 14 129 1.24E-47 T 15-10-2018 VIBNI_B1608 644ab122880d1c1ee08c5d3b7681b2a1 250 Gene3D G3DSA:2.60.120.200 39 246 1.1E-27 T 15-10-2018 VIBNI_B1608 644ab122880d1c1ee08c5d3b7681b2a1 250 Pfam PF14099 Polysaccharide lyase 42 234 2.7E-18 T 15-10-2018 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 VIBNI_A2891 11511fde55139b4f065b48bf17a62d39 613 SUPERFAMILY SSF56801 17 607 2.75E-115 T 15-10-2018 VIBNI_A2891 11511fde55139b4f065b48bf17a62d39 613 Gene3D G3DSA:3.40.50.12780 4 325 6.8E-56 T 15-10-2018 VIBNI_A2891 11511fde55139b4f065b48bf17a62d39 613 Gene3D G3DSA:3.40.50.12780 326 468 1.3E-32 T 15-10-2018 VIBNI_A2891 11511fde55139b4f065b48bf17a62d39 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A2891 11511fde55139b4f065b48bf17a62d39 613 Pfam PF00501 AMP-binding enzyme 25 477 1.0E-98 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1985 3bdeda4bb95102fa378c5e32754bcd6f 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 380 4.7E-19 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VIBNI_A1294 941462506239445b2dcc43533342a108 106 Pfam PF04269 Protein of unknown function, DUF440 6 105 1.5E-45 T 15-10-2018 IPR007376 dsDNA mimic, putative VIBNI_A1294 941462506239445b2dcc43533342a108 106 PIRSF PIRSF004916 1 105 4.7E-52 T 15-10-2018 IPR007376 dsDNA mimic, putative VIBNI_A1294 941462506239445b2dcc43533342a108 106 SUPERFAMILY SSF102816 3 105 1.24E-49 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily VIBNI_A1294 941462506239445b2dcc43533342a108 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-46 T 15-10-2018 IPR007376 dsDNA mimic, putative VIBNI_A1294 941462506239445b2dcc43533342a108 106 Gene3D G3DSA:3.10.450.140 5 105 4.6E-42 T 15-10-2018 IPR036763 Putative dsDNA mimic superfamily VIBNI_A1294 941462506239445b2dcc43533342a108 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.241 T 15-10-2018 IPR007376 dsDNA mimic, putative VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 SUPERFAMILY SSF52317 5 203 6.77E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 PIRSF PIRSF000495 4 204 2.8E-65 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 3.7E-17 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.896 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 3.8E-69 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VIBNI_A2288 0e8a45f724d5b12f1e217e90a60c3e98 204 Gene3D G3DSA:3.40.50.880 2 204 4.2E-73 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0291 97e31a49d8673351063d76c784af27a8 257 SUPERFAMILY SSF52540 2 224 1.36E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0291 97e31a49d8673351063d76c784af27a8 257 Pfam PF00005 ABC transporter 17 166 1.0E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0291 97e31a49d8673351063d76c784af27a8 257 SMART SM00382 26 210 1.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0291 97e31a49d8673351063d76c784af27a8 257 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0291 97e31a49d8673351063d76c784af27a8 257 Gene3D G3DSA:3.40.50.300 1 251 3.6E-65 T 15-10-2018 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Gene3D G3DSA:3.40.50.10730 142 346 2.6E-258 T 15-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 SUPERFAMILY SSF111326 6 552 4.84E-260 T 15-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Pfam PF01175 Urocanase Rossmann-like domain 141 346 1.8E-84 T 15-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Hamap MF_00577 Urocanate hydratase [hutU]. 2 553 49.516 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 PIRSF PIRSF001423 1 558 1.8E-294 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 10 551 1.2E-292 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Pfam PF17392 Urocanase C-terminal domain 349 543 1.1E-91 T 15-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Gene3D G3DSA:3.40.1770.10 17 539 2.6E-258 T 15-10-2018 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 Pfam PF17391 Urocanase N-terminal domain 12 138 3.0E-62 T 15-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1177 53a5aafaa92b9e9c861fc941155dcda8 559 ProSitePatterns PS01233 Urocanase signature. 439 454 - T 15-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Pfam PF02254 TrkA-N domain 235 350 1.6E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Pfam PF02254 TrkA-N domain 3 113 7.0E-28 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Gene3D G3DSA:3.30.70.1450 140 232 3.4E-21 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 SUPERFAMILY SSF116726 375 437 6.02E-7 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 SUPERFAMILY SSF51735 1 151 3.0E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 7.0E-32 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 7.0E-32 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 7.0E-32 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 7.0E-32 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 7.0E-32 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Gene3D G3DSA:3.40.50.720 233 366 1.1E-37 T 15-10-2018 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Gene3D G3DSA:3.30.70.1450 367 458 2.5E-28 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Pfam PF02080 TrkA-C domain 391 451 5.4E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 SUPERFAMILY SSF51735 232 376 1.44E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 Gene3D G3DSA:3.40.50.720 2 139 5.6E-51 T 15-10-2018 VIBNI_A3839 f510817e538023a3039783d0c42a5e65 458 SUPERFAMILY SSF116726 148 226 1.44E-9 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82714 725 810 1.83E-19 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 15-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82693 136 332 1.44E-21 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82866 298 500 1.2E-47 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82693 565 674 7.32E-22 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82693 39 132 3.82E-25 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 15-10-2018 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.1E-91 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82714 184 273 2.09E-21 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1320 75ff473d3dc327bf51e1444fa65c7409 1050 SUPERFAMILY SSF82866 808 1035 1.44E-43 T 15-10-2018 VIBNI_A3052 4f7570804aeb75196be3f7a746ad3fc1 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 2.5E-110 T 15-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VIBNI_A3052 4f7570804aeb75196be3f7a746ad3fc1 444 PIRSF PIRSF006351 4 434 1.3E-140 T 15-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VIBNI_A3052 4f7570804aeb75196be3f7a746ad3fc1 444 Pfam PF02378 Phosphotransferase system, EIIC 32 351 2.2E-60 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A3483 6e3015664e5235c953c54d45d8c63179 333 SUPERFAMILY SSF51556 3 324 3.85E-73 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A3483 6e3015664e5235c953c54d45d8c63179 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 327 9.3E-114 T 15-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VIBNI_A3483 6e3015664e5235c953c54d45d8c63179 333 Pfam PF00962 Adenosine/AMP deaminase 5 327 9.6E-87 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VIBNI_A3483 6e3015664e5235c953c54d45d8c63179 333 Gene3D G3DSA:3.20.20.140 1 333 7.3E-93 T 15-10-2018 VIBNI_A3483 6e3015664e5235c953c54d45d8c63179 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.273 T 15-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VIBNI_A0374 5255e0123935f3fe7517e22684d448ee 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 346 8.4E-163 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_A0374 5255e0123935f3fe7517e22684d448ee 358 Pfam PF00793 DAHP synthetase I family 41 340 4.5E-104 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A0374 5255e0123935f3fe7517e22684d448ee 358 Gene3D G3DSA:3.20.20.70 3 348 6.8E-158 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0374 5255e0123935f3fe7517e22684d448ee 358 SUPERFAMILY SSF51569 8 345 1.83E-138 T 15-10-2018 VIBNI_A0374 5255e0123935f3fe7517e22684d448ee 358 PIRSF PIRSF001361 1 353 4.2E-163 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 SUPERFAMILY SSF53681 116 259 5.63E-34 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 TIGRFAM TIGR00067 glut_race: glutamate racemase 13 232 1.2E-64 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 Hamap MF_00258 Glutamate racemase [murI]. 11 257 32.669 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 78 86 - T 15-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 Gene3D G3DSA:3.40.50.1860 15 240 1.1E-82 T 15-10-2018 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 Gene3D G3DSA:3.40.50.1860 103 211 1.1E-82 T 15-10-2018 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 Pfam PF01177 Asp/Glu/Hydantoin racemase 15 218 9.1E-26 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A3348 6396b236e4ae8137a5d4f6e6150687e5 269 SUPERFAMILY SSF53681 13 113 4.51E-30 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 Gene3D G3DSA:3.40.50.1820 104 373 1.8E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 Gene3D G3DSA:2.40.50.100 3 103 1.6E-20 T 15-10-2018 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 203 216 2.8E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 159 174 2.8E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 319 333 2.8E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 230 2.8E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 SUPERFAMILY SSF53474 113 370 3.41E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 SUPERFAMILY SSF51230 7 97 6.28E-22 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 33 62 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 Pfam PF12697 Alpha/beta hydrolase family 138 367 1.1E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0879 8f605746d158c96d211feec0093560fe 373 Pfam PF00364 Biotin-requiring enzyme 11 79 4.2E-13 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0725 4521af58617b69b1e8df4a118b7ae90e 266 Pfam PF09811 Essential protein Yae1, N terminal 76 112 2.5E-7 T 15-10-2018 IPR019191 Essential protein Yae1, N-terminal VIBNI_A0725 4521af58617b69b1e8df4a118b7ae90e 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 7.6E-33 T 15-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VIBNI_A0725 4521af58617b69b1e8df4a118b7ae90e 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 3.9E-7 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VIBNI_A0725 4521af58617b69b1e8df4a118b7ae90e 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 3.9E-7 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VIBNI_A0725 4521af58617b69b1e8df4a118b7ae90e 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 3.9E-7 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 Pfam PF14743 DNA ligase OB-like domain 213 278 7.2E-23 T 15-10-2018 IPR029319 DNA ligase, OB-like domain VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 SUPERFAMILY SSF50249 174 278 1.83E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 Gene3D G3DSA:3.30.470.30 52 152 3.6E-51 T 15-10-2018 VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 Gene3D G3DSA:2.40.50.140 199 280 1.5E-5 T 15-10-2018 VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 SUPERFAMILY SSF56091 30 200 2.3E-38 T 15-10-2018 VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 Gene3D G3DSA:3.30.1490.70 32 191 3.6E-51 T 15-10-2018 VIBNI_A1655 bcdb4b795b81aadda169176b5d4820a0 280 Pfam PF09414 RNA ligase 42 199 5.9E-7 T 15-10-2018 IPR021122 RNA ligase domain, REL/Rln2 VIBNI_B1109 30c1fd8debffc395c7b96766af1c7922 384 Gene3D G3DSA:1.20.1250.20 195 380 2.0E-9 T 15-10-2018 VIBNI_B1109 30c1fd8debffc395c7b96766af1c7922 384 Pfam PF07690 Major Facilitator Superfamily 17 341 1.6E-20 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1109 30c1fd8debffc395c7b96766af1c7922 384 Gene3D G3DSA:1.20.1250.20 10 191 3.1E-13 T 15-10-2018 VIBNI_B1109 30c1fd8debffc395c7b96766af1c7922 384 SUPERFAMILY SSF103473 10 376 3.14E-32 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A2341 96141863dbfda2536fa8d457e81f0f2a 384 Pfam PF01734 Patatin-like phospholipase 29 198 6.5E-17 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_A2341 96141863dbfda2536fa8d457e81f0f2a 384 SUPERFAMILY SSF52151 25 270 1.33E-33 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_A2341 96141863dbfda2536fa8d457e81f0f2a 384 Gene3D G3DSA:3.40.1090.10 17 111 1.5E-9 T 15-10-2018 VIBNI_A1348 7a5965a74b351ede8dc7c7f6e827d4a0 455 SMART SM01230 115 370 1.8E-91 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A1348 7a5965a74b351ede8dc7c7f6e827d4a0 455 SUPERFAMILY SSF55931 116 453 8.93E-104 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VIBNI_A1348 7a5965a74b351ede8dc7c7f6e827d4a0 455 Gene3D G3DSA:3.30.590.10 113 455 5.0E-103 T 15-10-2018 VIBNI_A1348 7a5965a74b351ede8dc7c7f6e827d4a0 455 Pfam PF00120 Glutamine synthetase, catalytic domain 116 451 4.0E-98 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Gene3D G3DSA:1.10.3210.10 803 931 2.6E-26 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Gene3D G3DSA:1.10.3210.10 562 687 1.5E-19 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 SUPERFAMILY SSF103190 166 232 1.8E-7 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 SUPERFAMILY SSF109604 576 680 1.07E-8 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Gene3D G3DSA:3.30.450.20 223 304 2.4E-14 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 SUPERFAMILY SSF55781 406 568 2.94E-7 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Pfam PF13487 HD domain 809 874 2.3E-19 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Gene3D G3DSA:3.30.450.20 159 222 2.4E-14 T 15-10-2018 VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 SMART SM00471 583 892 0.001 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 Gene3D G3DSA:3.30.450.40 400 559 4.8E-9 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1284 a95eac5bdde21e29330f0a0179349511 983 SUPERFAMILY SSF109604 810 921 1.07E-10 T 15-10-2018 VIBNI_B1319 6a80d7bf5a8a780eacc77e98287dac3d 399 Pfam PF04542 Sigma-70 region 2 16 76 5.7E-10 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1319 6a80d7bf5a8a780eacc77e98287dac3d 399 Gene3D G3DSA:1.10.1740.10 1 74 2.5E-8 T 15-10-2018 VIBNI_B1319 6a80d7bf5a8a780eacc77e98287dac3d 399 SUPERFAMILY SSF88946 6 93 9.42E-15 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1319 6a80d7bf5a8a780eacc77e98287dac3d 399 SUPERFAMILY SSF48452 348 387 5.81E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 PRINTS PR00050 Cold shock protein signature 7 22 4.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 PRINTS PR00050 Cold shock protein signature 43 61 4.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 PRINTS PR00050 Cold shock protein signature 28 37 4.4E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 Gene3D G3DSA:2.40.50.140 1 70 3.0E-30 T 15-10-2018 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 PIRSF PIRSF002599 1 70 3.3E-24 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 SUPERFAMILY SSF50249 3 68 3.09E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B1152 20f761316211d2a2104631da40339e16 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 4.3E-30 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1152 20f761316211d2a2104631da40339e16 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 15-10-2018 IPR019844 Cold-shock conserved site VIBNI_B1152 20f761316211d2a2104631da40339e16 70 SMART SM00357 6 70 1.9E-30 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_A3294 0cc68def4880ea649a6f1696b5a76a5e 388 Gene3D G3DSA:1.20.1250.20 196 383 4.1E-29 T 15-10-2018 VIBNI_A3294 0cc68def4880ea649a6f1696b5a76a5e 388 Gene3D G3DSA:1.20.1250.20 2 183 5.3E-12 T 15-10-2018 VIBNI_A3294 0cc68def4880ea649a6f1696b5a76a5e 388 Pfam PF12832 MFS_1 like family 13 361 4.4E-37 T 15-10-2018 IPR024989 Major facilitator superfamily associated domain VIBNI_A3294 0cc68def4880ea649a6f1696b5a76a5e 388 PIRSF PIRSF004925 1 387 1.2E-99 T 15-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VIBNI_A3294 0cc68def4880ea649a6f1696b5a76a5e 388 SUPERFAMILY SSF103473 9 373 9.81E-29 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SUPERFAMILY SSF47384 356 415 4.71E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SMART SM00073 6 103 8.3E-18 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SMART SM00260 594 735 5.3E-38 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SMART SM00387 459 602 7.0E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Gene3D G3DSA:3.30.565.10 415 601 8.9E-57 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Gene3D G3DSA:1.20.120.160 2 143 2.1E-36 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 356 414 2.5E-12 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SUPERFAMILY SSF55874 417 600 6.55E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SUPERFAMILY SSF50341 601 735 1.09E-29 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Pfam PF01584 CheW-like domain 608 736 2.5E-23 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 2.0E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Gene3D G3DSA:2.40.50.180 625 690 7.5E-36 T 15-10-2018 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Pfam PF01627 Hpt domain 8 99 2.8E-18 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SMART SM01231 354 414 2.9E-17 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 SUPERFAMILY SSF47226 6 129 3.4E-32 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Gene3D G3DSA:1.10.287.560 355 414 2.7E-19 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VIBNI_A0745 c4124d06f50deb5c68d60efed3a6fa24 744 Gene3D G3DSA:2.30.30.40 602 731 7.5E-36 T 15-10-2018 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 Pfam PF00005 ABC transporter 327 485 1.8E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 5.5E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 Gene3D G3DSA:1.10.3720.10 65 276 1.3E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 SUPERFAMILY SSF52540 306 556 7.39E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 SMART SM00382 335 542 1.8E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 SUPERFAMILY SSF161098 70 257 8.11E-30 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 535 620 6.7E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 537 601 1.4E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B0570 0fe2e3296017d2be00ca626a08bd69cf 626 Gene3D G3DSA:3.40.50.300 304 626 3.9E-92 T 15-10-2018 VIBNI_B1044 b1cdf6ac27b2e151c9d8e5317d8ffb3b 441 Pfam PF00589 Phage integrase family 210 397 5.3E-10 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_B1044 b1cdf6ac27b2e151c9d8e5317d8ffb3b 441 SUPERFAMILY SSF56349 102 399 7.36E-23 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_B1044 b1cdf6ac27b2e151c9d8e5317d8ffb3b 441 Gene3D G3DSA:1.10.443.10 184 399 8.0E-18 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SMART SM00448 455 566 2.9E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Gene3D G3DSA:3.40.50.2300 435 569 9.2E-38 T 15-10-2018 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Gene3D G3DSA:3.30.565.10 273 433 1.7E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SUPERFAMILY SSF55874 263 428 2.36E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SUPERFAMILY SSF52172 453 569 6.55E-35 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SMART SM00387 321 432 4.7E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 1.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 1.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Pfam PF00072 Response regulator receiver domain 457 565 2.0E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SUPERFAMILY SSF47384 195 274 6.28E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 SMART SM00388 209 274 2.3E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Gene3D G3DSA:1.10.287.130 182 272 5.0E-22 T 15-10-2018 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 274 2.8E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1982 8d1b20f9ed6394db10e49c7d5bf79c32 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 430 1.9E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 SUPERFAMILY SSF161098 202 447 6.02E-32 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 PRINTS PR00342 Rhesus blood group protein signature 310 323 1.4E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 PRINTS PR00342 Rhesus blood group protein signature 365 381 1.4E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 PRINTS PR00342 Rhesus blood group protein signature 168 184 1.4E-6 T 15-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 161 455 2.3E-86 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 3.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 177 2.3E-31 T 15-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 VIBNI_B0959 b61bc61b7bf232004f78e83b04ae1837 460 Gene3D G3DSA:1.10.3720.10 226 458 1.7E-34 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SMART SM00382 217 360 4.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SMART SM00382 605 753 7.2E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Gene3D G3DSA:3.40.50.300 367 552 1.2E-44 T 15-10-2018 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Gene3D G3DSA:3.40.50.300 558 769 5.8E-62 T 15-10-2018 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SUPERFAMILY SSF52540 179 552 1.87E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 639 657 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SUPERFAMILY SSF52540 554 835 1.6E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Gene3D G3DSA:1.10.1780.10 5 159 1.3E-36 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 847 6.8E-12 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 683 701 4.1E-28 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 627 4.1E-28 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 672 4.1E-28 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 716 730 4.1E-28 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 855 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SMART SM01086 771 863 6.3E-10 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Gene3D G3DSA:3.40.50.300 177 366 1.0E-61 T 15-10-2018 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 SUPERFAMILY SSF81923 12 124 4.19E-13 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 604 764 4.1E-37 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 334 3.2E-9 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_B0346 4dcc7d7d20eeedef578d96baf21b7f30 866 Gene3D G3DSA:1.10.8.60 771 866 9.8E-11 T 15-10-2018 VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 Pfam PF02132 RecR protein 41 77 1.8E-14 T 15-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 Gene3D G3DSA:1.10.8.420 1 53 1.6E-18 T 15-10-2018 VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 SUPERFAMILY SSF111304 2 199 1.26E-71 T 15-10-2018 IPR023627 Recombination protein RecR VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 Pfam PF13662 Toprim domain 82 172 1.7E-22 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 Gene3D G3DSA:3.40.1360.10 78 199 7.0E-39 T 15-10-2018 VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 3.3E-78 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 SMART SM00493 81 166 2.3E-17 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.201 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VIBNI_A0817 8d4ee0ed60dbc7f8ffd17655d0082cae 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 15-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 Gene3D G3DSA:3.30.420.40 82 203 8.5E-42 T 15-10-2018 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 Gene3D G3DSA:1.10.10.10 2 76 1.5E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 Gene3D G3DSA:3.30.420.40 204 331 8.5E-42 T 15-10-2018 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 SUPERFAMILY SSF53067 83 369 3.66E-30 T 15-10-2018 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 ProSitePatterns PS01125 ROK family signature. 215 242 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 56 3.2E-5 T 15-10-2018 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 Pfam PF00480 ROK family 92 351 1.6E-30 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_B0531 8f91075e8b05b9d326adb733249a5e43 398 SUPERFAMILY SSF46785 9 71 8.25E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0267 505e573268f6b51c27b14c1becff74e2 317 Pfam PF03186 CobD/Cbib protein 18 284 3.3E-34 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 SUPERFAMILY SSF48150 7 206 5.34E-61 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 1.1E-19 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 TIGRFAM TIGR01083 nth: endonuclease III 9 195 2.1E-65 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 SMART SM00478 43 190 5.2E-48 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 Gene3D G3DSA:1.10.1670.10 17 205 1.5E-64 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 Gene3D G3DSA:1.10.340.30 26 137 1.5E-64 T 15-10-2018 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 PIRSF PIRSF001435 3 215 2.9E-43 T 15-10-2018 VIBNI_A0903 6d81aaec170d9e1b6fddfc54402801d2 226 Hamap MF_00942 Endonuclease III [nth]. 5 214 33.086 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.4E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 SUPERFAMILY SSF54211 238 493 9.86E-99 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 SUPERFAMILY SSF55874 10 218 3.8E-63 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 SMART SM00387 32 189 2.8E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Gene3D G3DSA:3.30.230.80 237 404 8.6E-69 T 15-10-2018 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 SUPERFAMILY SSF110942 520 632 1.01E-32 T 15-10-2018 IPR037196 HSP90, C-terminal domain VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 15-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Gene3D G3DSA:3.40.50.11260 405 494 1.8E-34 T 15-10-2018 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Gene3D G3DSA:3.30.565.10 2 232 1.9E-74 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 31.983 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Pfam PF00183 Hsp90 protein 224 632 5.2E-125 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Gene3D G3DSA:1.20.120.790 499 632 4.8E-40 T 15-10-2018 IPR037196 HSP90, C-terminal domain VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.8E-12 T 15-10-2018 VIBNI_A2601 dc81d3c39ff882c5ee2e7c5fed283e8c 634 PIRSF PIRSF002583 2 634 4.2E-211 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:3.30.460.100 566 815 3.1E-90 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:1.10.4050.10 4 114 7.2E-18 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Pfam PF08335 GlnD PII-uridylyltransferase 302 441 3.1E-42 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Pfam PF08335 GlnD PII-uridylyltransferase 831 935 3.0E-9 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 SUPERFAMILY SSF81593 292 440 1.33E-41 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:3.30.460.10 117 289 9.1E-65 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 SUPERFAMILY SSF81593 820 947 1.02E-30 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:1.20.120.330 290 445 4.3E-54 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 SUPERFAMILY SSF81301 529 819 2.32E-87 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 32 949 19.353 T 15-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:1.20.120.1510 452 565 1.9E-32 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Gene3D G3DSA:1.20.120.330 816 949 4.1E-43 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 SUPERFAMILY SSF81301 29 291 1.23E-85 T 15-10-2018 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 36 280 3.6E-94 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VIBNI_A0194 0a5cd51ce0b02e895495ba677a0a35b4 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 2.8E-97 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VIBNI_A3817 1678388f46e627daccfe126535b5d40c 397 Gene3D G3DSA:3.20.20.70 191 396 3.0E-55 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3817 1678388f46e627daccfe126535b5d40c 397 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 208 389 8.2E-47 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A3817 1678388f46e627daccfe126535b5d40c 397 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 189 395 19.283 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A3817 1678388f46e627daccfe126535b5d40c 397 Pfam PF02581 Thiamine monophosphate synthase 208 377 4.2E-53 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A3817 1678388f46e627daccfe126535b5d40c 397 SUPERFAMILY SSF51391 200 393 2.09E-60 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.4E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.4E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.4E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.4E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.4E-38 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 Gene3D G3DSA:3.30.930.10 157 510 4.0E-129 T 15-10-2018 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 1.0E-7 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.386 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 8.1E-78 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 Gene3D G3DSA:2.40.50.140 10 156 2.4E-29 T 15-10-2018 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 SUPERFAMILY SSF55681 161 507 1.79E-116 T 15-10-2018 VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 SUPERFAMILY SSF50249 16 154 2.69E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A0321 592a1b95b2a0b60705e7a0c8015c13b8 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.4E-201 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 SUPERFAMILY SSF52374 1 313 2.56E-102 T 15-10-2018 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.071 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 5.2E-191 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 SMART SM00840 341 402 2.5E-28 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 Gene3D G3DSA:3.40.50.620 1 305 8.6E-137 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 SUPERFAMILY SSF47323 316 460 2.42E-41 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 Gene3D G3DSA:1.20.120.640 306 461 8.2E-53 T 15-10-2018 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 Pfam PF09190 DALR domain 341 402 6.9E-25 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_A2280 ddf85e7ac4e0116f390d8f19b11b45bb 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.2E-141 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VIBNI_B0010 77e808bc1c3d26a6164374a1fad0b851 154 Gene3D G3DSA:2.40.50.180 24 134 2.9E-36 T 15-10-2018 VIBNI_B0010 77e808bc1c3d26a6164374a1fad0b851 154 SUPERFAMILY SSF50341 2 143 1.83E-35 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_B0010 77e808bc1c3d26a6164374a1fad0b851 154 Gene3D G3DSA:2.30.30.40 8 133 2.9E-36 T 15-10-2018 VIBNI_B0010 77e808bc1c3d26a6164374a1fad0b851 154 SMART SM00260 1 139 1.5E-33 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0010 77e808bc1c3d26a6164374a1fad0b851 154 Pfam PF01584 CheW-like domain 5 141 1.5E-31 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0478 0e4dbfd11af8183f543d5914f0629925 243 Gene3D G3DSA:3.40.190.10 33 237 4.2E-23 T 15-10-2018 VIBNI_B0478 0e4dbfd11af8183f543d5914f0629925 243 Gene3D G3DSA:3.40.190.10 107 201 4.2E-23 T 15-10-2018 VIBNI_B0478 0e4dbfd11af8183f543d5914f0629925 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 237 4.7E-22 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B0478 0e4dbfd11af8183f543d5914f0629925 243 SUPERFAMILY SSF53850 28 238 8.8E-33 T 15-10-2018 VIBNI_B0478 0e4dbfd11af8183f543d5914f0629925 243 SMART SM00062 27 242 0.0024 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 SUPERFAMILY SSF55073 297 451 1.8E-40 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Gene3D G3DSA:3.30.70.270 295 457 2.8E-46 T 15-10-2018 VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 445 8.4E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 SUPERFAMILY SSF141868 464 709 1.7E-86 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Gene3D G3DSA:3.30.450.20 161 281 1.2E-12 T 15-10-2018 VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 SMART SM00052 459 704 1.1E-103 T 15-10-2018 IPR001633 EAL domain VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 SUPERFAMILY SSF55785 176 278 2.93E-9 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Pfam PF00563 EAL domain 466 699 4.5E-68 T 15-10-2018 IPR001633 EAL domain VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Gene3D G3DSA:3.20.20.450 460 713 3.1E-92 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 Pfam PF13426 PAS domain 178 278 1.2E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 SMART SM00267 279 449 9.1E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1369 61f6474b7e07213ab1d535dc4ff95e76 723 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 447 1.8E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0676 798a5e9407aa59d2198d0e1ac4944263 276 SUPERFAMILY SSF52518 8 274 1.26E-75 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0676 798a5e9407aa59d2198d0e1ac4944263 276 Gene3D G3DSA:3.40.50.970 2 276 1.0E-86 T 15-10-2018 VIBNI_A0676 798a5e9407aa59d2198d0e1ac4944263 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 28 268 9.1E-41 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 SUPERFAMILY SSF55681 8 293 2.19E-131 T 15-10-2018 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.2E-169 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.9E-70 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 4.0E-148 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.526 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 Gene3D G3DSA:3.30.930.10 1 215 1.4E-109 T 15-10-2018 VIBNI_A0011 c935bc481f647d750997bcad02c02787 310 Gene3D G3DSA:1.20.58.180 216 298 2.4E-33 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 Gene3D G3DSA:2.60.40.2540 24 177 1.1E-54 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 Pfam PF00691 OmpA family 189 284 1.4E-22 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 SUPERFAMILY SSF103088 160 289 4.05E-30 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 30 46 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 87 105 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 150 169 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 5 29 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 235 252 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 68 86 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 106 123 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 47 65 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 253 272 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 125 147 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 206 232 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 293 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 203 7.0E-134 T 15-10-2018 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01021 OMPA domain signature 235 251 1.5E-6 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01021 OMPA domain signature 220 235 1.5E-6 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 PRINTS PR01021 OMPA domain signature 189 211 1.5E-6 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A0896 00dc4a4b3e5c65790d7b8026d3b6f7be 295 Gene3D G3DSA:3.30.1330.60 178 295 3.5E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1205 ecccdabf12ebb326164f4458235903b2 288 Gene3D G3DSA:3.20.20.140 1 285 2.4E-66 T 15-10-2018 VIBNI_A1205 ecccdabf12ebb326164f4458235903b2 288 Pfam PF04909 Amidohydrolase 3 282 1.1E-26 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A1205 ecccdabf12ebb326164f4458235903b2 288 SUPERFAMILY SSF51556 2 282 1.28E-43 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 SUPERFAMILY SSF51735 119 296 3.74E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 SUPERFAMILY SSF50129 1 153 2.28E-36 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 15-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 Gene3D G3DSA:3.90.180.10 19 313 4.7E-92 T 15-10-2018 VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.2E-9 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 Pfam PF13602 Zinc-binding dehydrogenase 190 326 1.7E-22 T 15-10-2018 VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 SMART SM00829 10 326 8.4E-30 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0120 1d1a8e5209d1e96f8ed4e7e023be2c3a 328 Gene3D G3DSA:3.40.50.720 127 295 4.7E-92 T 15-10-2018 VIBNI_A1622 0face52e6627ad0089a052ccaeb0c50f 305 SMART SM00901 26 163 7.5E-16 T 15-10-2018 IPR014966 FRG domain VIBNI_A1622 0face52e6627ad0089a052ccaeb0c50f 305 Pfam PF08867 FRG domain 29 164 2.1E-20 T 15-10-2018 IPR014966 FRG domain VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 Gene3D G3DSA:3.40.50.300 1 243 9.9E-57 T 15-10-2018 VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 Pfam PF00005 ABC transporter 21 174 4.2E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 SMART SM00382 282 478 1.6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 SMART SM00382 30 221 3.2E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 SUPERFAMILY SSF52540 5 231 2.98E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 SUPERFAMILY SSF52540 273 484 5.01E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 Pfam PF00005 ABC transporter 274 429 4.2E-12 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1544 7eb3af81696da2fdc279d7bd0a5c613b 504 Gene3D G3DSA:3.40.50.300 266 500 9.0E-35 T 15-10-2018 VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 Gene3D G3DSA:2.30.30.60 196 248 2.7E-10 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 SUPERFAMILY SSF50182 180 247 4.25E-18 T 15-10-2018 IPR010920 LSM domain superfamily VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 Pfam PF00924 Mechanosensitive ion channel 138 340 3.1E-57 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 15-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 Gene3D G3DSA:3.30.70.100 249 346 8.1E-15 T 15-10-2018 VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 SUPERFAMILY SSF82689 252 351 2.88E-19 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VIBNI_B1033 760425b745186f5551dbf3b596cb81ad 367 SUPERFAMILY SSF82861 98 179 6.02E-14 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VIBNI_A0606 99b00faab512942790b92aab09a4c947 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 264 1.2E-96 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VIBNI_A0606 99b00faab512942790b92aab09a4c947 269 SUPERFAMILY SSF53613 6 267 8.42E-81 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0606 99b00faab512942790b92aab09a4c947 269 Gene3D G3DSA:3.40.1190.20 1 269 1.4E-104 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0606 99b00faab512942790b92aab09a4c947 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 266 4.6E-102 T 15-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 Gene3D G3DSA:1.20.1560.10 9 338 6.3E-56 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 SUPERFAMILY SSF90123 10 340 1.44E-56 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 SMART SM00382 383 574 1.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 Gene3D G3DSA:3.40.50.300 356 595 2.1E-81 T 15-10-2018 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 Pfam PF00664 ABC transporter transmembrane region 27 310 3.2E-30 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 Pfam PF00005 ABC transporter 374 522 1.7E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1795 749bdfce43ea4d9c7b4a900b51130932 596 SUPERFAMILY SSF52540 355 590 2.07E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 Pfam PF00293 NUDIX domain 46 155 5.5E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 PRINTS PR00502 NUDIX hydrolase family signature 89 104 6.2E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 PRINTS PR00502 NUDIX hydrolase family signature 75 89 6.2E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 Gene3D G3DSA:3.90.79.10 7 184 1.2E-51 T 15-10-2018 VIBNI_A3368 0be4452a65bd9d27105965860f274d90 184 SUPERFAMILY SSF55811 6 181 1.62E-41 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 1.7E-30 T 15-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 8.2E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SUPERFAMILY SSF55785 86 196 8.38E-11 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Pfam PF00989 PAS fold 99 159 5.8E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SMART SM00091 98 166 4.1E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Gene3D G3DSA:3.30.565.10 286 432 1.5E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SUPERFAMILY SSF47384 192 271 3.92E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SMART SM00388 205 272 2.7E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Gene3D G3DSA:3.30.450.20 85 201 1.4E-9 T 15-10-2018 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Gene3D G3DSA:1.10.287.130 202 272 3.8E-20 T 15-10-2018 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SUPERFAMILY SSF55874 261 427 4.45E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 SMART SM00387 317 429 1.8E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.6E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 4.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 4.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0406 d850a231f6b2afacb318065e2368f917 435 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 3.7E-137 T 15-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 SUPERFAMILY SSF52540 352 601 2.61E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 SUPERFAMILY SSF90123 22 342 4.71E-52 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 Gene3D G3DSA:1.20.1560.10 9 336 4.2E-27 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 Pfam PF00005 ABC transporter 378 531 7.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 SMART SM00382 386 577 1.8E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 Pfam PF00664 ABC transporter transmembrane region 40 308 2.8E-18 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1581 925295881a1dd613e726f3647832c0ec 621 Gene3D G3DSA:3.40.50.300 351 606 1.7E-91 T 15-10-2018 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Gene3D G3DSA:1.10.3120.10 116 416 1.5E-106 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 PIRSF PIRSF003095 1 433 2.2E-126 T 15-10-2018 IPR005215 Trigger factor GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 233 6.0E-12 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Gene3D G3DSA:3.10.50.40 150 246 1.5E-106 T 15-10-2018 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Gene3D G3DSA:3.30.70.1050 1 115 3.7E-41 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 SUPERFAMILY SSF109998 248 428 1.67E-49 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 SUPERFAMILY SSF54534 90 241 8.64E-37 T 15-10-2018 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 TIGRFAM TIGR00115 tig: trigger factor 11 411 2.5E-143 T 15-10-2018 IPR005215 Trigger factor GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.7E-42 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 SUPERFAMILY SSF102735 1 131 1.7E-41 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 411 7.4E-41 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VIBNI_A2429 68b4ed4ddb3c1c2250a17e15f2ad7cbb 433 Hamap MF_00303 Trigger factor [tig]. 1 417 21.702 T 15-10-2018 IPR005215 Trigger factor GO:0015031 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 299 320 1.9E-4 T 15-10-2018 IPR020008 GlyGly-CTERM domain VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 5.8E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 60 75 5.8E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 218 230 5.8E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 Pfam PF00089 Trypsin 26 270 6.4E-44 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 Gene3D G3DSA:2.40.10.10 18 274 2.0E-56 T 15-10-2018 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 SUPERFAMILY SSF50494 5 275 3.89E-58 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 70 75 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 SMART SM00020 25 270 3.9E-50 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0820 209f74b808c7944f339b12ec51761767 320 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 219 230 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 Pfam PF07702 UTRA domain 87 225 1.1E-23 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 1.0E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 1.0E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 SMART SM00866 86 226 3.3E-19 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 SMART SM00345 7 65 5.3E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 64 2.0E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 SUPERFAMILY SSF46785 2 74 4.91E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 SUPERFAMILY SSF64288 53 229 2.04E-35 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 3 231 2.6E-58 T 15-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 Gene3D G3DSA:1.10.10.10 1 65 2.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0026 cc8a74594d7f5f144e1b81cf97d731a1 231 Gene3D G3DSA:3.40.1410.10 73 231 8.8E-31 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 Gene3D G3DSA:3.40.30.10 10 209 1.1E-65 T 15-10-2018 VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 88 3.5E-13 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 Gene3D G3DSA:1.20.1050.10 90 207 1.1E-65 T 15-10-2018 VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 SUPERFAMILY SSF52833 8 98 4.15E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 151 208 7.1E-9 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal VIBNI_B0509 d4d41aa48cba862be317526c8773b6fa 212 SUPERFAMILY SSF47616 86 211 5.43E-20 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 Gene3D G3DSA:3.60.120.10 7 521 3.1E-184 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 SUPERFAMILY SSF56322 13 516 3.01E-156 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 1.7E-220 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 5.5E-14 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 PIRSF PIRSF001373 4 521 2.4E-252 T 15-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 Pfam PF00425 chorismate binding enzyme 247 507 4.9E-85 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 PRINTS PR00095 Anthranilate synthase component I signature 369 382 9.3E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 PRINTS PR00095 Anthranilate synthase component I signature 355 368 9.3E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 PRINTS PR00095 Anthranilate synthase component I signature 449 463 9.3E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1276 bfa9e816c0bd01b9988bf9a8e74ac2db 521 PRINTS PR00095 Anthranilate synthase component I signature 464 478 9.3E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 377 389 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 298 311 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 172 185 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 5 16 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PRINTS PR00471 Acetate kinase family signature 202 223 1.3E-45 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 Gene3D G3DSA:3.30.420.40 2 194 1.5E-74 T 15-10-2018 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 PIRSF PIRSF000722 1 397 2.0E-147 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.412 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 Pfam PF00871 Acetokinase family 5 390 2.3E-164 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.9E-169 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 Gene3D G3DSA:3.30.420.40 195 397 3.7E-83 T 15-10-2018 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 SUPERFAMILY SSF53067 155 395 4.35E-87 T 15-10-2018 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 SUPERFAMILY SSF53067 3 195 1.29E-65 T 15-10-2018 VIBNI_A2401 6662a1e7bdbb7873813564ded8455fc3 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VIBNI_A0465 2060867de1b38fecdaeb81920a04ce44 333 SUPERFAMILY SSF82549 12 329 9.16E-111 T 15-10-2018 VIBNI_A0465 2060867de1b38fecdaeb81920a04ce44 333 Pfam PF02733 Dak1 domain 18 325 1.3E-108 T 15-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VIBNI_A0465 2060867de1b38fecdaeb81920a04ce44 333 Gene3D G3DSA:3.40.50.10440 13 184 6.3E-55 T 15-10-2018 VIBNI_A0465 2060867de1b38fecdaeb81920a04ce44 333 Gene3D G3DSA:3.30.1180.20 185 330 4.0E-44 T 15-10-2018 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 1.9E-177 T 15-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 Gene3D G3DSA:3.40.50.300 4 182 5.0E-43 T 15-10-2018 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 Pfam PF07670 Nucleoside recognition 348 440 2.2E-13 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 Pfam PF07670 Nucleoside recognition 508 690 3.8E-35 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 SUPERFAMILY SSF52540 4 176 5.47E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 Pfam PF02421 Ferrous iron transport protein B 5 160 6.6E-56 T 15-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 154 6.2E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A2547 1de9f2045688fdb1d2e59afb9b4ddde0 757 Pfam PF07664 Ferrous iron transport protein B C terminus 451 503 2.7E-19 T 15-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 187 197 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 Gene3D G3DSA:2.60.120.380 502 599 8.5E-33 T 15-10-2018 VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 Gene3D G3DSA:3.40.50.200 151 488 5.4E-102 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 518 581 2.7E-10 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 201 7.2E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 PRINTS PR00723 Subtilisin serine protease family (S8) signature 252 265 7.2E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 PRINTS PR00723 Subtilisin serine protease family (S8) signature 422 438 7.2E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 Pfam PF00082 Subtilase family 182 461 4.8E-51 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 423 433 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_B0271 be65c08e7d07faf25bf4499d9b22af00 601 SUPERFAMILY SSF52743 167 484 1.26E-77 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B1257 f3851e0aa4543d73d43985cb7fba676b 224 SUPERFAMILY SSF52540 5 220 9.35E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1257 f3851e0aa4543d73d43985cb7fba676b 224 Gene3D G3DSA:3.40.50.300 3 224 1.8E-58 T 15-10-2018 VIBNI_B1257 f3851e0aa4543d73d43985cb7fba676b 224 Pfam PF00005 ABC transporter 25 170 8.9E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1257 f3851e0aa4543d73d43985cb7fba676b 224 SMART SM00382 34 218 1.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1257 f3851e0aa4543d73d43985cb7fba676b 224 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Pfam PF00583 Acetyltransferase (GNAT) family 503 570 2.2E-8 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 SUPERFAMILY SSF48557 3 456 1.73E-141 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 SUPERFAMILY SSF55729 466 585 8.72E-16 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.6E-67 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.228 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.8E-23 T 15-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Gene3D G3DSA:1.10.40.30 363 433 2.0E-146 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Gene3D G3DSA:1.20.200.10 108 446 2.0E-146 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Gene3D G3DSA:1.10.275.10 1 107 7.2E-36 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Pfam PF00206 Lyase 6 301 4.7E-88 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 Gene3D G3DSA:3.40.630.30 464 608 7.3E-25 T 15-10-2018 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PIRSF PIRSF036456 1 624 0.0 T 15-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 6.9E-201 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3591 1e6e7f1683b79a6e44e69eceacd98db2 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A2299 73d7023c91a90940af5a20f1086531f0 308 Gene3D G3DSA:2.40.160.10 21 308 2.8E-25 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_A2299 73d7023c91a90940af5a20f1086531f0 308 SUPERFAMILY SSF56935 34 308 6.66E-30 T 15-10-2018 VIBNI_A2299 73d7023c91a90940af5a20f1086531f0 308 Pfam PF13609 Gram-negative porin 7 296 4.3E-26 T 15-10-2018 VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 Gene3D G3DSA:3.40.50.720 4 255 3.7E-80 T 15-10-2018 VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 5.4E-62 T 15-10-2018 VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 SUPERFAMILY SSF51735 10 254 7.33E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 181 0.0037 T 15-10-2018 VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0233 e5211bf38a06e99d1f1156a326263040 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.8E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 1.6E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 SMART SM00354 13 83 7.0E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 SUPERFAMILY SSF53822 73 341 2.16E-76 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 Pfam PF13377 Periplasmic binding protein-like domain 181 338 3.0E-36 T 15-10-2018 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 SUPERFAMILY SSF47413 13 62 6.34E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 25 35 3.2E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 3.2E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 Gene3D G3DSA:3.40.50.2300 73 317 9.3E-73 T 15-10-2018 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 Gene3D G3DSA:1.10.260.40 5 68 4.7E-16 T 15-10-2018 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 Gene3D G3DSA:3.40.50.2300 171 300 9.3E-73 T 15-10-2018 VIBNI_B1738 b38625620347271fd7ee81d64ac1d3a9 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 15-10-2018 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 Gene3D G3DSA:3.30.565.10 336 476 1.9E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 Gene3D G3DSA:1.10.287.130 219 330 2.8E-13 T 15-10-2018 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 SUPERFAMILY SSF55874 331 473 2.49E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 SMART SM00387 372 477 2.9E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 SUPERFAMILY SSF47384 259 321 2.35E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0272 45fcdf602f5d5062f0094ce5cc16a28b 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 472 2.1E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SUPERFAMILY SSF55073 260 404 1.02E-34 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 403 2.2E-33 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Gene3D G3DSA:3.40.50.2300 2 122 1.4E-16 T 15-10-2018 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SMART SM00448 124 238 2.5E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SMART SM00448 3 115 7.4E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SMART SM00267 244 407 1.7E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Gene3D G3DSA:3.30.70.270 249 406 3.8E-41 T 15-10-2018 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Gene3D G3DSA:3.40.50.2300 124 248 6.3E-29 T 15-10-2018 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Pfam PF00072 Response regulator receiver domain 127 236 3.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 Pfam PF00072 Response regulator receiver domain 5 105 5.3E-10 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 405 6.6E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SUPERFAMILY SSF52172 117 258 1.99E-31 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0581 d7af1b90ff61b6d85459253eea240934 407 SUPERFAMILY SSF52172 4 121 2.28E-17 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0203 bb555192804821d931946f1de2c3b93b 244 Pfam PF12525 Protein of unknown function (DUF3726) 3 80 2.0E-33 T 15-10-2018 IPR022201 Protein of unknown function DUF3726 VIBNI_A1395 5092103263012c48e7473ac0473687b4 158 Pfam PF00293 NUDIX domain 15 127 5.6E-13 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A1395 5092103263012c48e7473ac0473687b4 158 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A1395 5092103263012c48e7473ac0473687b4 158 Gene3D G3DSA:3.90.79.10 1 155 3.3E-36 T 15-10-2018 VIBNI_A1395 5092103263012c48e7473ac0473687b4 158 SUPERFAMILY SSF55811 11 137 1.9E-25 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A0670 755ba45dae5bfb3b2ac3f45970b70f0b 320 Pfam PF04198 Putative sugar-binding domain 63 313 1.0E-65 T 15-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VIBNI_A0670 755ba45dae5bfb3b2ac3f45970b70f0b 320 Pfam PF12802 MarR family 14 52 3.3E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A0670 755ba45dae5bfb3b2ac3f45970b70f0b 320 Gene3D G3DSA:1.10.10.60 1 54 5.2E-16 T 15-10-2018 VIBNI_A0670 755ba45dae5bfb3b2ac3f45970b70f0b 320 SUPERFAMILY SSF100950 63 313 1.05E-68 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0670 755ba45dae5bfb3b2ac3f45970b70f0b 320 Gene3D G3DSA:3.40.50.1360 55 313 1.7E-88 T 15-10-2018 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Gene3D G3DSA:3.40.50.720 93 258 4.8E-113 T 15-10-2018 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 2.0E-36 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 44.946 T 15-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 SUPERFAMILY SSF51735 93 258 2.7E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 282 2.8E-23 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 SUPERFAMILY SSF52283 3 131 1.34E-23 T 15-10-2018 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Gene3D G3DSA:3.40.50.720 1 279 4.8E-113 T 15-10-2018 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 7.7E-28 T 15-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VIBNI_A0800 c6958d9c70349424e5de66145bf45da3 381 Gene3D G3DSA:3.30.1370.170 294 381 3.1E-34 T 15-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VIBNI_A3773 a834ff4d712803ba7d1657c824f88e75 395 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 55 383 2.6E-103 T 15-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 SMART SM00344 3 112 9.9E-35 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.2E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.2E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.2E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 Gene3D G3DSA:1.10.10.10 4 54 1.7E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 7.2E-17 T 15-10-2018 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 Gene3D G3DSA:3.30.70.920 56 140 2.8E-20 T 15-10-2018 VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 SUPERFAMILY SSF54909 65 148 2.55E-17 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.9E-17 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_B1500 567ba1fa1956b357d3fadb88536080c2 149 SUPERFAMILY SSF46785 3 59 1.37E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 Gene3D G3DSA:2.40.50.140 262 322 9.5E-15 T 15-10-2018 VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 SUPERFAMILY SSF50331 237 336 2.67E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 Gene3D G3DSA:2.40.50.100 256 334 9.5E-15 T 15-10-2018 VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 Gene3D G3DSA:3.40.50.300 1 238 1.1E-77 T 15-10-2018 VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 SUPERFAMILY SSF52540 4 243 1.38E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 Pfam PF00005 ABC transporter 20 161 5.6E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 SMART SM00382 28 211 3.9E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2699 737cdec06f5b393b9ed847213c95b539 344 Pfam PF08402 TOBE domain 259 329 8.7E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 Pfam PF00107 Zinc-binding dehydrogenase 191 316 6.0E-20 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 SMART SM00829 15 355 4.8E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 SUPERFAMILY SSF50129 4 190 6.39E-47 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 SUPERFAMILY SSF51735 160 315 1.34E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 148 1.5E-26 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 Gene3D G3DSA:3.90.180.10 15 344 5.8E-93 T 15-10-2018 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 Gene3D G3DSA:3.40.50.720 168 305 5.8E-93 T 15-10-2018 VIBNI_B0717 31f8603984d1aa0675f1f3aea4620ff1 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 Gene3D G3DSA:3.90.226.10 2 318 2.2E-119 T 15-10-2018 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.0E-48 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.479 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 1.8E-63 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 SUPERFAMILY SSF52096 5 318 1.91E-104 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A2488 7aa4df8831665e2093aa445fdeb9326d 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 8.9E-165 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 Gene3D G3DSA:2.60.98.20 154 315 6.0E-22 T 15-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 432 2.0E-14 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 8.8E-22 T 15-10-2018 IPR011491 Flagellar hook protein FlgE VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 2.3E-90 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 Pfam PF00460 Flagella basal body rod protein 3 32 2.3E-8 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VIBNI_A2638 7e02b8c796419d67f37405111fa0c2fb 434 SUPERFAMILY SSF117143 78 395 1.57E-67 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 SUPERFAMILY SSF52540 1 231 3.06E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 Gene3D G3DSA:3.40.50.300 1 247 1.2E-64 T 15-10-2018 VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 SMART SM00382 26 223 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 Pfam PF00005 ABC transporter 17 172 2.2E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2120 da3b2394b01471a8293038cd789af027 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.1E-112 T 15-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 47 70 3.7E-7 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 3.7E-7 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 23 46 3.7E-7 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 Pfam PF00797 N-acetyltransferase 26 253 2.1E-61 T 15-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 Gene3D G3DSA:3.30.2140.20 1 255 6.1E-74 T 15-10-2018 VIBNI_B0269 bff9e354ae0af25595ba2cfff5d080f0 265 SUPERFAMILY SSF54001 3 253 1.12E-63 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 PIRSF PIRSF039102 1 335 6.5E-79 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 7.9E-98 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 SUPERFAMILY SSF56059 116 330 1.14E-44 T 15-10-2018 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Pfam PF07478 D-ala D-ala ligase C-terminus 126 326 2.1E-54 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Gene3D G3DSA:3.30.470.20 105 320 7.1E-83 T 15-10-2018 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Gene3D G3DSA:3.40.50.20 19 326 7.1E-83 T 15-10-2018 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 SUPERFAMILY SSF52440 3 115 1.73E-25 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Gene3D G3DSA:3.30.1490.20 132 199 7.1E-83 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Pfam PF01820 D-ala D-ala ligase N-terminus 5 106 1.4E-21 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_B1133 ba02d01b710fbb66135603a2f93ea861 335 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 33.089 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A2906 8a2588869336f354d65a5074e4bef14d 436 Gene3D G3DSA:2.40.30.170 60 361 1.0E-31 T 15-10-2018 VIBNI_A2906 8a2588869336f354d65a5074e4bef14d 436 Gene3D G3DSA:2.40.420.20 362 425 1.0E-31 T 15-10-2018 VIBNI_A2906 8a2588869336f354d65a5074e4bef14d 436 Gene3D G3DSA:2.40.50.100 66 252 1.0E-31 T 15-10-2018 VIBNI_A2906 8a2588869336f354d65a5074e4bef14d 436 Gene3D G3DSA:1.10.287.470 103 218 1.0E-31 T 15-10-2018 VIBNI_A2906 8a2588869336f354d65a5074e4bef14d 436 SUPERFAMILY SSF111369 60 356 1.96E-9 T 15-10-2018 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 Gene3D G3DSA:3.40.605.10 23 461 2.4E-152 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 Pfam PF00171 Aldehyde dehydrogenase family 16 480 2.7E-139 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 Gene3D G3DSA:3.40.309.10 249 453 2.4E-152 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 7.3E-207 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 SUPERFAMILY SSF53720 2 485 3.14E-146 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A2144 1dd8bf99d91841c370ce13d804546246 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 15-10-2018 VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 Gene3D G3DSA:3.40.50.1000 9 265 3.5E-49 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 SUPERFAMILY SSF56784 6 269 5.56E-49 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 11 265 2.5E-41 T 15-10-2018 IPR000150 Cof family GO:0016787 VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 Gene3D G3DSA:3.30.1240.10 87 191 3.5E-49 T 15-10-2018 VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 11 265 3.8E-46 T 15-10-2018 VIBNI_B0696 48d10b8419e7a5acf6b5f5a52b6bb2de 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 236 1.4E-19 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_A3004 e86d157b5447db55cec18651d9e62dd5 476 PIRSF PIRSF028153 1 476 6.5E-183 T 15-10-2018 IPR016871 MSHA biogenesis protein, MshI VIBNI_A3004 e86d157b5447db55cec18651d9e62dd5 476 SUPERFAMILY SSF53067 30 152 8.42E-12 T 15-10-2018 VIBNI_B0931 7a31069ad6b0bba2957906648112fcb5 133 SUPERFAMILY SSF118196 5 131 3.53E-32 T 15-10-2018 IPR036413 YaeB-like superfamily VIBNI_B0931 7a31069ad6b0bba2957906648112fcb5 133 ProSitePatterns PS01318 TsaA-like domain signature. 83 94 - T 15-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VIBNI_B0931 7a31069ad6b0bba2957906648112fcb5 133 Gene3D G3DSA:2.40.30.70 1 133 2.1E-34 T 15-10-2018 IPR036414 YaeB, N-terminal domain superfamily VIBNI_B0931 7a31069ad6b0bba2957906648112fcb5 133 Pfam PF01980 Uncharacterised protein family UPF0066 29 132 1.5E-26 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.0E-48 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Gene3D G3DSA:3.40.710.10 250 625 1.1E-87 T 15-10-2018 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Gene3D G3DSA:3.30.1390.30 86 161 1.1E-51 T 15-10-2018 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Gene3D G3DSA:3.90.1310.10 65 249 1.1E-51 T 15-10-2018 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 SUPERFAMILY SSF56519 57 253 5.1E-55 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 619 6.8E-235 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 52.51 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 2.7E-67 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VIBNI_A2714 d34b9662a7e5d8ac61ff29358692a1c9 626 SUPERFAMILY SSF56601 255 619 3.87E-90 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2192 8e17218072edcd84b867fee72635add9 306 Pfam PF03773 Predicted permease 8 302 5.2E-53 T 15-10-2018 IPR005524 Predicted permease DUF318 VIBNI_A2130 800153c7cd63760240fa01d03be8c0d2 106 SUPERFAMILY SSF54736 21 105 3.24E-32 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VIBNI_A2130 800153c7cd63760240fa01d03be8c0d2 106 Gene3D G3DSA:3.30.1390.10 1 106 2.6E-45 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VIBNI_A2130 800153c7cd63760240fa01d03be8c0d2 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.4E-33 T 15-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VIBNI_A2130 800153c7cd63760240fa01d03be8c0d2 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.008 T 15-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 165 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 479 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 428 446 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 165 184 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 267 283 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 297 316 4.8E-68 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 Gene3D G3DSA:1.10.246.130 283 406 1.1E-37 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 Gene3D G3DSA:3.60.20.40 407 585 1.6E-61 T 15-10-2018 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 SUPERFAMILY SSF56235 42 584 1.22E-177 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 51 577 1.8E-139 T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VIBNI_A3803 36546e814d9f5746cddb7a97da8de3b3 585 Pfam PF01019 Gamma-glutamyltranspeptidase 65 580 1.7E-165 T 15-10-2018 VIBNI_A0937 5b7e3dcc857d9824d585eb436963edd8 354 Pfam PF14240 YHYH protein 119 330 6.2E-53 T 15-10-2018 IPR025924 YHYH domain VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 1.3E-60 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 PIRSF PIRSF003078 1 209 1.6E-59 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.106 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 Gene3D G3DSA:3.40.50.150 4 209 2.1E-66 T 15-10-2018 VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 SUPERFAMILY SSF53335 7 208 4.87E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3871 c119e782040de42ba5c634c2f55cb6a7 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 4.1E-57 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 SUPERFAMILY SSF51735 106 296 5.75E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 SUPERFAMILY SSF52283 7 137 3.02E-28 T 15-10-2018 VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 295 2.8E-49 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 326 2.7E-24 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 Gene3D G3DSA:3.40.50.720 30 321 4.5E-93 T 15-10-2018 VIBNI_B0437 f2cf2b407ed3a9e1d7c0981f0ea56559 335 Gene3D G3DSA:3.40.50.720 104 296 4.5E-93 T 15-10-2018 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 SUPERFAMILY SSF53850 90 300 8.81E-32 T 15-10-2018 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 Gene3D G3DSA:3.40.190.10 163 267 3.1E-49 T 15-10-2018 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 Gene3D G3DSA:1.10.10.10 2 89 1.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 Pfam PF03466 LysR substrate binding domain 89 296 6.0E-33 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 Gene3D G3DSA:3.40.190.10 92 292 3.1E-49 T 15-10-2018 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 SUPERFAMILY SSF46785 2 111 2.2E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0173 aed839ad1aec0fe6bbdfda87267e30ce 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0416 ce7dd8ce5cd07def861fdc9be3e06c48 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 205 30.511 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A0416 ce7dd8ce5cd07def861fdc9be3e06c48 247 Pfam PF03932 CutC family 4 203 7.4E-82 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A0416 ce7dd8ce5cd07def861fdc9be3e06c48 247 SUPERFAMILY SSF110395 4 245 2.22E-75 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A0416 ce7dd8ce5cd07def861fdc9be3e06c48 247 Gene3D G3DSA:3.20.20.380 3 247 1.6E-89 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 SUPERFAMILY SSF47616 166 311 7.8E-36 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 6.3E-23 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 SUPERFAMILY SSF52833 31 150 3.36E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 Gene3D G3DSA:1.20.1050.10 170 312 2.1E-70 T 15-10-2018 VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 263 8.5E-14 T 15-10-2018 VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 PIRSF PIRSF015753 5 312 5.1E-140 T 15-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VIBNI_A0930 a24efc807be6f57b639c1663fa4b6739 312 Gene3D G3DSA:3.40.30.130 1 169 1.9E-68 T 15-10-2018 VIBNI_A0814 338934e463b8e39136a9be70104b2223 181 Pfam PF00156 Phosphoribosyl transferase domain 39 154 5.8E-14 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VIBNI_A0814 338934e463b8e39136a9be70104b2223 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.2E-73 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VIBNI_A0814 338934e463b8e39136a9be70104b2223 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.079 T 15-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VIBNI_A0814 338934e463b8e39136a9be70104b2223 181 Gene3D G3DSA:3.40.50.2020 1 181 7.5E-68 T 15-10-2018 VIBNI_A0814 338934e463b8e39136a9be70104b2223 181 SUPERFAMILY SSF53271 8 178 1.85E-52 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 SUPERFAMILY SSF55874 354 477 9.69E-19 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 Pfam PF11884 Domain of unknown function (DUF3404) 16 273 1.2E-104 T 15-10-2018 IPR021821 Protein of unknown function DUF3404 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 SMART SM00387 378 476 1.2E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 Gene3D G3DSA:3.30.565.10 339 473 8.3E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 Gene3D G3DSA:1.10.287.130 281 338 8.3E-21 T 15-10-2018 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 474 3.4E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 SMART SM00388 274 341 5.2E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 SUPERFAMILY SSF47384 270 340 7.46E-7 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 4.8E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 4.8E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1144 73502b1aba0fc6efc7ce9f5688d9a036 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 330 2.2E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 7.3E-23 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 Gene3D G3DSA:1.10.10.10 1 59 3.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 3.2E-18 T 15-10-2018 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 Gene3D G3DSA:3.30.70.920 60 143 1.2E-25 T 15-10-2018 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 SUPERFAMILY SSF54909 66 151 5.9E-21 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.6E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.6E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.6E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 SMART SM00344 6 115 5.6E-42 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_B0044 42e94777e47d69860400b0b13038e962 161 SUPERFAMILY SSF46785 6 65 1.92E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 SMART SM00871 137 287 3.1E-18 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 Gene3D G3DSA:1.10.10.60 2 56 1.1E-11 T 15-10-2018 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 SUPERFAMILY SSF46689 60 109 3.63E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 Pfam PF12833 Helix-turn-helix domain 31 108 2.0E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 SMART SM00342 23 107 1.4E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 8.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 8.4E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 Pfam PF06445 GyrI-like small molecule binding domain 139 287 2.4E-27 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 Gene3D G3DSA:1.10.10.60 57 112 9.5E-17 T 15-10-2018 VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 Gene3D G3DSA:3.20.80.10 139 287 4.4E-29 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 SUPERFAMILY SSF55136 140 287 1.92E-26 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A1382 7758a06119a266d06a8d4e1fa9ecf028 289 SUPERFAMILY SSF46689 6 57 2.37E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1473 7aa4b78550c8526098afcb8572c86f44 667 SUPERFAMILY SSF141868 420 651 3.27E-56 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1473 7aa4b78550c8526098afcb8572c86f44 667 Gene3D G3DSA:3.20.20.450 406 657 1.3E-57 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1473 7aa4b78550c8526098afcb8572c86f44 667 SMART SM00052 407 644 9.2E-50 T 15-10-2018 IPR001633 EAL domain VIBNI_A1473 7aa4b78550c8526098afcb8572c86f44 667 Pfam PF02378 Phosphotransferase system, EIIC 86 302 2.0E-10 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A1473 7aa4b78550c8526098afcb8572c86f44 667 Pfam PF00563 EAL domain 417 638 2.6E-50 T 15-10-2018 IPR001633 EAL domain VIBNI_B1303 a496a2184175eb491c3322831fecdd13 45 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 9.5E-26 T 15-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VIBNI_B1303 a496a2184175eb491c3322831fecdd13 45 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 7.1E-26 T 15-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 SMART SM00382 35 241 7.8E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 305 2.3E-16 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 323 3.7E-21 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 Pfam PF00005 ABC transporter 26 183 9.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 SUPERFAMILY SSF52540 6 255 2.86E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0962 370616fc47ff5c52aa7df5c814f1b506 334 Gene3D G3DSA:3.40.50.300 4 330 2.0E-94 T 15-10-2018 VIBNI_B0532 cf0fb823b91a265a59d7fe0371d1d834 150 SUPERFAMILY SSF55729 6 143 7.33E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0532 cf0fb823b91a265a59d7fe0371d1d834 150 Gene3D G3DSA:3.40.630.30 3 148 9.5E-17 T 15-10-2018 VIBNI_B0532 cf0fb823b91a265a59d7fe0371d1d834 150 Pfam PF13673 Acetyltransferase (GNAT) domain 52 140 3.8E-9 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 34 278 2.0E-62 T 15-10-2018 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 Gene3D G3DSA:3.40.190.10 117 228 3.7E-94 T 15-10-2018 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 8 253 1.7E-83 T 15-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 7 292 6.2E-102 T 15-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 Gene3D G3DSA:1.20.58.90 278 330 1.4E-5 T 15-10-2018 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 Gene3D G3DSA:3.40.190.10 34 258 3.7E-94 T 15-10-2018 VIBNI_A0028 61eb5719f47e182cd33a819302398d59 331 SUPERFAMILY SSF53850 53 244 4.41E-40 T 15-10-2018 VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 Gene3D G3DSA:1.25.40.80 132 325 1.5E-97 T 15-10-2018 VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 SUPERFAMILY SSF48173 230 495 7.33E-62 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 225 1.2E-66 T 15-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 Gene3D G3DSA:1.10.579.10 329 449 9.0E-55 T 15-10-2018 VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 Gene3D G3DSA:3.40.50.620 8 231 1.5E-97 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B0546 acddc29aed4a8c3b3c9fb1564e7b9989 516 Gene3D G3DSA:1.10.10.1710 450 516 5.5E-26 T 15-10-2018 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 SUPERFAMILY SSF52540 3 239 1.26E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 SMART SM00382 344 514 4.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 SMART SM00382 28 230 4.0E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 SUPERFAMILY SSF52540 309 524 7.51E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Pfam PF16326 ABC transporter C-terminal domain 564 632 1.4E-21 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Pfam PF00005 ABC transporter 336 469 2.9E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Gene3D G3DSA:3.40.50.300 7 279 1.6E-65 T 15-10-2018 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Pfam PF12848 ABC transporter 224 299 1.1E-9 T 15-10-2018 IPR032781 ABC-transporter extension domain VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Gene3D G3DSA:1.10.287.380 554 637 5.1E-29 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Gene3D G3DSA:3.40.50.300 282 551 8.3E-66 T 15-10-2018 VIBNI_A1783 f2882c6a7be0a21cd4670de40f1e0c02 637 Pfam PF00005 ABC transporter 19 185 1.4E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3552 d6a860ae9cf21f2146d0f7da16e93243 135 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 3.3E-37 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3552 d6a860ae9cf21f2146d0f7da16e93243 135 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.775 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3552 d6a860ae9cf21f2146d0f7da16e93243 135 Pfam PF01250 Ribosomal protein S6 3 91 1.5E-27 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3552 d6a860ae9cf21f2146d0f7da16e93243 135 SUPERFAMILY SSF54995 1 103 8.89E-38 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3552 d6a860ae9cf21f2146d0f7da16e93243 135 Gene3D G3DSA:3.30.70.60 1 92 4.0E-32 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 8.3E-70 T 15-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Pfam PF02926 THUMP domain 61 158 1.7E-22 T 15-10-2018 IPR004114 THUMP domain GO:0003723 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 6.0E-111 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.7E-42 T 15-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 SUPERFAMILY SSF52821 404 481 2.75E-13 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 SUPERFAMILY SSF143437 1 173 1.66E-46 T 15-10-2018 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Gene3D G3DSA:3.40.50.620 175 397 3.2E-50 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 SMART SM00981 75 165 1.4E-24 T 15-10-2018 IPR004114 THUMP domain GO:0003723 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.291 T 15-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Gene3D G3DSA:3.30.2130.30 1 174 9.8E-33 T 15-10-2018 VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 Gene3D G3DSA:3.40.250.10 398 482 4.2E-13 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A0668 8bd8fc0a9ed7c0bc491c9be33da030d7 482 SUPERFAMILY SSF52402 174 372 3.09E-41 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF47336 1596 1669 8.38E-7 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:1.10.1200.10 1590 1678 4.9E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF13193 AMP-binding enzyme C-terminal domain 1493 1569 1.6E-5 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 496 1.1E-7 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.30.300.30 412 513 3.5E-28 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1932 2050 4.1E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1102 1510 1.2E-116 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 26 439 2.5E-96 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF08659 KR domain 2356 2527 2.4E-32 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.40.50.720 2122 2587 2.6E-68 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00550 Phosphopantetheine attachment site 2601 2665 7.8E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00550 Phosphopantetheine attachment site 1600 1668 4.4E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00550 Phosphopantetheine attachment site 536 597 1.7E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.40.50.12780 1067 1479 6.4E-109 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.40.50.12780 1 411 2.2E-100 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF53901 1684 2099 9.04E-76 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00975 Thioesterase domain 2686 2915 5.5E-16 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00668 Condensation domain 622 1056 3.1E-64 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1223 1234 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:1.10.1200.10 534 606 3.7E-11 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.40.47.10 1679 2121 1.7E-142 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF56801 2 510 2.49E-112 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF52777 811 1051 3.67E-38 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1687 1923 2.1E-63 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF52777 625 802 7.23E-31 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.40.50.1820 2685 2916 7.1E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00501 AMP-binding enzyme 5 417 1.6E-71 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF00501 AMP-binding enzyme 1081 1484 2.9E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 ProSitePatterns PS00012 Phosphopantetheine attachment site. 557 572 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF53474 2685 2913 6.96E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.30.300.30 1480 1583 8.4E-25 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF51735 2354 2575 9.23E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SMART SM00823 Phosphopantetheine attachment site 532 602 0.028 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SMART SM00823 Phosphopantetheine attachment site 2600 2667 0.039 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF47336 534 598 7.07E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2056 2105 1.4E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.30.559.10 625 990 3.2E-78 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:3.30.559.30 806 1045 3.2E-78 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2356 2529 4.4E-15 T 15-10-2018 VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 Gene3D G3DSA:1.10.1200.10 2588 2673 5.6E-9 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF51735 2143 2304 1.97E-5 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SMART SM00825 Beta-ketoacyl synthase 1689 2104 7.3E-137 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF47336 2598 2668 4.45E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1885 b5f9fec50b46e87649958731406fdb12 2919 SUPERFAMILY SSF56801 1043 1578 5.89E-118 T 15-10-2018 VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 Pfam PF05199 GMC oxidoreductase 391 509 3.6E-22 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 Pfam PF00732 GMC oxidoreductase 13 305 7.4E-17 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 Gene3D G3DSA:3.50.50.60 11 166 2.8E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 Gene3D G3DSA:3.50.50.60 174 333 4.1E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 Gene3D G3DSA:3.50.50.60 435 522 2.2E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 SUPERFAMILY SSF51905 12 519 4.54E-58 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0582 244bb0ac7077225693528a1a8ba5693a 523 SUPERFAMILY SSF54373 364 459 1.1E-13 T 15-10-2018 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 SUPERFAMILY SSF50621 227 357 9.77E-47 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 SUPERFAMILY SSF51419 8 234 1.89E-71 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 Hamap MF_01201 Alanine racemase. 1 357 35.738 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 SMART SM01005 233 357 6.5E-69 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 Gene3D G3DSA:3.20.20.10 10 217 1.3E-134 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 Gene3D G3DSA:2.40.37.10 8 352 1.3E-134 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 2.8E-42 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 TIGRFAM TIGR00492 alr: alanine racemase 4 357 5.4E-135 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 60 78 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 26 42 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 287 304 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 339 352 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 266 281 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 192 219 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 120 132 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 155 166 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 PRINTS PR00992 Alanine racemase signature 249 264 1.3E-71 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A3546 3ea990494c99d4912cc55bcc5e7e9a11 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 9.5E-74 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 Pfam PF07687 Peptidase dimerisation domain 188 283 7.5E-12 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 SUPERFAMILY SSF55031 185 298 9.29E-32 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 SUPERFAMILY SSF53187 7 386 1.37E-85 T 15-10-2018 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 Gene3D G3DSA:3.40.630.10 16 373 6.6E-140 T 15-10-2018 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 376 3.7E-113 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 PIRSF PIRSF005962 1 389 2.0E-131 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 Pfam PF01546 Peptidase family M20/M25/M40 74 385 1.4E-38 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A0855 d1ace73bdef19260b276981d784c1781 389 Gene3D G3DSA:3.30.70.360 183 297 6.6E-140 T 15-10-2018 VIBNI_A0747 47d1cc1d1b432f5938d481b223913db7 258 Gene3D G3DSA:3.40.50.300 2 254 8.2E-67 T 15-10-2018 VIBNI_A0747 47d1cc1d1b432f5938d481b223913db7 258 Pfam PF13614 AAA domain 4 174 3.2E-51 T 15-10-2018 IPR025669 AAA domain VIBNI_A0747 47d1cc1d1b432f5938d481b223913db7 258 SUPERFAMILY SSF52540 3 253 9.69E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 SUPERFAMILY SSF52218 50 186 4.19E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 462 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 512 528 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 406 415 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 468 477 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 254 264 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 535 543 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 492 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 380 2.7E-29 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 SUPERFAMILY SSF63380 209 430 2.27E-62 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00369 Flavodoxin signature 51 64 4.9E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00369 Flavodoxin signature 99 110 4.9E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00369 Flavodoxin signature 131 141 4.9E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PRINTS PR00369 Flavodoxin signature 155 174 4.9E-14 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 PIRSF PIRSF000207 7 586 1.2E-215 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Pfam PF00258 Flavodoxin 52 182 8.8E-32 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Pfam PF00175 Oxidoreductase NAD-binding domain 444 550 1.2E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 SUPERFAMILY SSF52343 431 586 3.67E-48 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Gene3D G3DSA:1.20.990.10 264 371 8.2E-66 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Gene3D G3DSA:3.40.50.360 41 197 1.3E-44 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Pfam PF00667 FAD binding domain 216 411 1.1E-32 T 15-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Gene3D G3DSA:3.40.50.80 432 586 2.8E-56 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0047 17db15cc587394229fd60eedee59220c 586 Gene3D G3DSA:2.40.30.10 216 425 8.2E-66 T 15-10-2018 VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Pfam PF00563 EAL domain 394 629 1.3E-69 T 15-10-2018 IPR001633 EAL domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SUPERFAMILY SSF55785 91 208 5.58E-22 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Gene3D G3DSA:3.30.450.20 85 217 5.0E-24 T 15-10-2018 VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SUPERFAMILY SSF55073 226 379 1.65E-38 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SUPERFAMILY SSF141868 393 641 1.7E-85 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 218 377 5.5E-33 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Gene3D G3DSA:3.30.70.270 218 391 4.1E-48 T 15-10-2018 VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SMART SM00267 210 378 1.2E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SMART SM00091 97 163 3.7E-9 T 15-10-2018 IPR000014 PAS domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 373 3.4E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Gene3D G3DSA:3.20.20.450 392 644 1.9E-93 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 Pfam PF08448 PAS fold 103 211 1.5E-17 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 SMART SM00052 388 634 6.5E-106 T 15-10-2018 IPR001633 EAL domain VIBNI_B1282 3591f55de075b09567540a1b2dc266fc 647 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 93 217 5.6E-18 T 15-10-2018 IPR000014 PAS domain VIBNI_A1355 5b9fc6b3cab57aed3dfee1e17574e282 260 Gene3D G3DSA:3.40.50.300 1 260 5.2E-71 T 15-10-2018 VIBNI_A1355 5b9fc6b3cab57aed3dfee1e17574e282 260 Pfam PF00005 ABC transporter 30 178 6.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1355 5b9fc6b3cab57aed3dfee1e17574e282 260 SUPERFAMILY SSF52540 3 252 2.95E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1355 5b9fc6b3cab57aed3dfee1e17574e282 260 SMART SM00382 38 227 1.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 SUPERFAMILY SSF51735 6 252 7.72E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 Gene3D G3DSA:3.40.50.720 1 253 1.8E-81 T 15-10-2018 VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 3.7E-132 T 15-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.5E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 2.0E-58 T 15-10-2018 VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0650 521b0c497f217b06652d14b1716802fe 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0053 e9656611597ae84cf69a239e80396bbb 417 SUPERFAMILY SSF52266 149 413 1.83E-24 T 15-10-2018 VIBNI_B0053 e9656611597ae84cf69a239e80396bbb 417 Gene3D G3DSA:3.40.50.1110 135 415 5.3E-42 T 15-10-2018 IPR036514 SGNH hydrolase superfamily VIBNI_B0053 e9656611597ae84cf69a239e80396bbb 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 150 408 2.9E-15 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VIBNI_B0053 e9656611597ae84cf69a239e80396bbb 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 150 161 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 SUPERFAMILY SSF50331 244 354 4.76E-14 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 Pfam PF08402 TOBE domain 283 353 2.0E-8 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 SMART SM00382 35 219 1.7E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 Gene3D G3DSA:2.40.50.140 290 346 9.9E-7 T 15-10-2018 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 Pfam PF00005 ABC transporter 27 169 3.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 Gene3D G3DSA:3.40.50.300 2 245 1.9E-72 T 15-10-2018 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 SUPERFAMILY SSF52540 10 248 6.23E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0580 77677d900334a0338867e68d62986b6e 364 Gene3D G3DSA:2.40.50.100 257 349 9.9E-7 T 15-10-2018 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 221 4.4E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 233 4.4E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 205 4.4E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 SUPERFAMILY SSF46894 181 249 1.16E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 Gene3D G3DSA:1.10.10.10 154 251 8.2E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1986 40961a943e120070a8811e25b3905908 252 SMART SM00421 188 245 1.2E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 ProSitePatterns PS00622 LuxR-type HTH domain signature. 205 232 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1986 40961a943e120070a8811e25b3905908 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 190 244 1.4E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3806 1b3079c0d1afc47324c4a28535ca87aa 282 Gene3D G3DSA:3.20.20.150 1 280 2.5E-81 T 15-10-2018 VIBNI_A3806 1b3079c0d1afc47324c4a28535ca87aa 282 Pfam PF05114 Protein of unknown function (DUF692) 4 268 3.5E-100 T 15-10-2018 IPR007801 Uncharacterised protein family UPF0276 VIBNI_A3806 1b3079c0d1afc47324c4a28535ca87aa 282 SUPERFAMILY SSF51658 20 250 7.46E-10 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 Gene3D G3DSA:1.20.1480.50 183 272 7.4E-6 T 15-10-2018 VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 SUPERFAMILY SSF158472 229 267 6.8E-6 T 15-10-2018 VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 SMART SM00304 218 270 5.2E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 Gene3D G3DSA:1.10.3210.10 273 484 5.1E-78 T 15-10-2018 VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 SUPERFAMILY SSF109604 270 469 2.26E-34 T 15-10-2018 VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 SMART SM00471 290 440 2.6E-9 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A2009 967ae1ab17854adaba71d54d2e87eea9 500 Pfam PF01966 HD domain 296 430 1.1E-17 T 15-10-2018 IPR006674 HD domain VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.614 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 PIRSF PIRSF000193 3 270 1.4E-73 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 SUPERFAMILY SSF51735 4 160 2.01E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 SUPERFAMILY SSF48179 163 270 1.87E-29 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 4.2E-29 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 9.8E-72 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 Gene3D G3DSA:1.10.3730.10 165 272 8.2E-34 T 15-10-2018 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 Gene3D G3DSA:3.40.50.720 2 164 1.4E-51 T 15-10-2018 VIBNI_A0054 074bb45bf67b54e620002c73cac4f2ef 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 3.6E-24 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VIBNI_B0140 e10347eb69ded45824ac74279b2d6330 442 Pfam PF03109 ABC1 family 115 230 1.4E-30 T 15-10-2018 IPR004147 UbiB domain VIBNI_B0140 e10347eb69ded45824ac74279b2d6330 442 SUPERFAMILY SSF56112 98 324 1.7E-17 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_B1955 e2c054d323e4e9a63d756f6f85fd6ac6 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 243 8.1E-60 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_B1955 e2c054d323e4e9a63d756f6f85fd6ac6 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 248 1.8E-113 T 15-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 VIBNI_B1955 e2c054d323e4e9a63d756f6f85fd6ac6 259 Gene3D G3DSA:3.90.850.10 37 251 8.2E-79 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B1955 e2c054d323e4e9a63d756f6f85fd6ac6 259 SUPERFAMILY SSF56529 37 249 1.57E-73 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A0270 f110074bc0b5d750a77be8ad7e508b46 300 Pfam PF02585 GlcNAc-PI de-N-acetylase 26 183 1.5E-5 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 VIBNI_A0270 f110074bc0b5d750a77be8ad7e508b46 300 SUPERFAMILY SSF102588 26 191 1.29E-6 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 VIBNI_A0270 f110074bc0b5d750a77be8ad7e508b46 300 Gene3D G3DSA:3.40.50.10320 17 258 1.7E-14 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 VIBNI_B1653 4db157954634bd424099d0b317389807 291 Pfam PF00510 Cytochrome c oxidase subunit III 7 290 2.2E-48 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1653 4db157954634bd424099d0b317389807 291 SUPERFAMILY SSF81452 2 291 9.52E-76 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1653 4db157954634bd424099d0b317389807 291 Gene3D G3DSA:1.10.287.70 1 75 7.7E-15 T 15-10-2018 VIBNI_B1653 4db157954634bd424099d0b317389807 291 Gene3D G3DSA:1.20.120.80 76 291 5.3E-62 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 Gene3D G3DSA:3.40.50.2300 63 188 2.4E-27 T 15-10-2018 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 7.3E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 SUPERFAMILY SSF53822 64 325 2.17E-40 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 SUPERFAMILY SSF47413 7 65 9.19E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 Gene3D G3DSA:3.40.50.2300 189 327 4.1E-8 T 15-10-2018 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 Pfam PF13407 Periplasmic binding protein domain 68 278 1.3E-18 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 Gene3D G3DSA:1.10.260.40 2 62 1.8E-22 T 15-10-2018 VIBNI_B0718 2a840d5df83dd98af0027a45e53224b2 329 SMART SM00354 7 77 9.9E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 Gene3D G3DSA:1.10.287.130 171 281 1.7E-23 T 15-10-2018 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 Pfam PF00672 HAMP domain 174 221 1.2E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 Gene3D G3DSA:3.30.565.10 288 435 7.6E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 4.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 4.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SUPERFAMILY SSF158472 175 223 1.57E-5 T 15-10-2018 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 1.2E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SMART SM00304 173 225 6.1E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SMART SM00387 325 435 7.8E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 433 1.7E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SUPERFAMILY SSF55874 290 434 2.23E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SMART SM00388 226 286 1.3E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3722 6f40aa9786da0a3d7c1b865492747b40 435 SUPERFAMILY SSF47384 220 281 1.75E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 SUPERFAMILY SSF52540 73 358 1.6E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Pfam PF00270 DEAD/DEAH box helicase 28 193 8.1E-47 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Pfam PF03880 DbpA RNA binding domain 388 458 5.6E-23 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 SMART SM00490 257 338 1.3E-30 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Gene3D G3DSA:3.30.70.330 387 462 3.0E-21 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 SMART SM00487 23 218 2.8E-60 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Pfam PF00271 Helicase conserved C-terminal domain 231 338 4.7E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Gene3D G3DSA:3.40.50.300 210 372 1.1E-45 T 15-10-2018 VIBNI_A1557 1f0d3f739b9d04d009d15fa754dde504 462 Gene3D G3DSA:3.40.50.300 2 209 1.2E-75 T 15-10-2018 VIBNI_A2615 08164b5ae4a87db2ed3d613a877acd64 150 Gene3D G3DSA:2.40.50.140 81 150 3.0E-10 T 15-10-2018 VIBNI_A2615 08164b5ae4a87db2ed3d613a877acd64 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 6.1E-25 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain VIBNI_A2615 08164b5ae4a87db2ed3d613a877acd64 150 SUPERFAMILY SSF141322 90 149 1.26E-6 T 15-10-2018 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 15-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 Gene3D G3DSA:3.10.20.30 1 112 3.5E-35 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 9.0E-60 T 15-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 PRINTS PR00355 Adrenodoxin signature 42 52 2.0E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 PRINTS PR00355 Adrenodoxin signature 60 74 2.0E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 PRINTS PR00355 Adrenodoxin signature 83 91 2.0E-10 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 SUPERFAMILY SSF54292 5 107 3.74E-31 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A2782 a5877f2d132fc9994f5e842062d69af2 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 6.4E-14 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.989 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 PIRSF PIRSF005572 2 384 3.5E-137 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 Pfam PF00266 Aminotransferase class-V 5 368 8.8E-90 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 Gene3D G3DSA:3.90.1150.10 5 375 2.2E-167 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 Gene3D G3DSA:3.40.640.10 16 262 2.2E-167 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.3E-229 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VIBNI_A2787 e91f80bf617d7f3c7fe783b1aed398bd 404 SUPERFAMILY SSF53383 5 391 2.96E-115 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 SUPERFAMILY SSF52317 241 423 2.96E-24 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 Gene3D G3DSA:3.40.50.880 228 413 4.8E-12 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 11 186 1.2E-15 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 422 36.609 T 15-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 241 418 2.7E-31 T 15-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 SUPERFAMILY SSF52540 8 193 1.11E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 422 5.8E-90 T 15-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 VIBNI_A0067 f9199ff418fcde0fd2af100a4d51cbee 434 Gene3D G3DSA:3.40.50.300 8 182 1.2E-17 T 15-10-2018 VIBNI_A2483 b66ca6607ef38391b402907376dd493d 280 SUPERFAMILY SSF56219 60 277 1.57E-24 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_A2483 b66ca6607ef38391b402907376dd493d 280 Gene3D G3DSA:3.60.10.10 59 280 1.7E-20 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_A2483 b66ca6607ef38391b402907376dd493d 280 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 65 269 6.5E-9 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 Gene3D G3DSA:3.30.950.10 111 229 1.2E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 248 1.4E-97 T 15-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 SUPERFAMILY SSF53790 2 229 1.26E-62 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 207 8.6E-45 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0068 a8ac44d467a47b65037c06a30282942d 258 Gene3D G3DSA:3.40.1010.10 1 110 1.3E-27 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 SMART SM00089 417 496 4.2E-12 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Pfam PF02839 Carbohydrate binding domain 522 545 1.1E-5 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Gene3D G3DSA:2.10.10.20 501 555 2.8E-16 T 15-10-2018 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Gene3D G3DSA:2.40.10.10 305 400 1.4E-6 T 15-10-2018 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Gene3D G3DSA:2.40.10.10 208 300 2.6E-7 T 15-10-2018 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Gene3D G3DSA:2.60.40.10 411 496 1.3E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 SUPERFAMILY SSF49299 413 494 2.88E-17 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 SUPERFAMILY SSF51055 504 554 4.58E-15 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 SMART SM00495 505 551 2.9E-16 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 SUPERFAMILY SSF50494 198 396 3.92E-25 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0270 b80f5402c1fb31f93083ce0612f8e9fc 555 Pfam PF13365 Trypsin-like peptidase domain 218 374 1.4E-13 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Gene3D G3DSA:3.30.450.20 134 251 3.3E-28 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Gene3D G3DSA:3.30.450.20 254 368 1.5E-31 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SUPERFAMILY SSF58104 474 589 9.68E-42 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SUPERFAMILY SSF55785 27 141 4.19E-25 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SUPERFAMILY SSF55785 390 497 1.1E-21 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 259 4.7E-21 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 2.7E-26 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 380 1.5E-26 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 383 499 5.0E-24 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 577 3.0E-34 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00086 334 374 3.9E-4 T 15-10-2018 IPR001610 PAC motif VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00086 455 495 110.0 T 15-10-2018 IPR001610 PAC motif VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00086 213 253 1.1 T 15-10-2018 IPR001610 PAC motif VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00086 92 132 11.0 T 15-10-2018 IPR001610 PAC motif VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 549 6.0E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 580 6.0E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Gene3D G3DSA:3.30.450.20 12 133 1.5E-29 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SUPERFAMILY SSF55785 149 262 1.68E-23 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00091 379 445 1.7E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00091 137 203 6.6E-10 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00091 258 324 4.5E-11 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00091 16 82 1.1E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SUPERFAMILY SSF55785 269 381 5.32E-27 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 SMART SM00283 432 591 8.1E-4 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Pfam PF13426 PAS domain 390 493 1.1E-12 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Pfam PF13426 PAS domain 269 373 5.4E-15 T 15-10-2018 IPR000014 PAS domain VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Gene3D G3DSA:3.30.450.20 369 468 2.1E-14 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Gene3D G3DSA:1.10.287.950 475 593 3.5E-41 T 15-10-2018 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Pfam PF00989 PAS fold 138 250 1.9E-13 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_B1292 631dd2def23c9634088279d133a5cab0 596 Pfam PF00989 PAS fold 20 129 2.0E-15 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Gene3D G3DSA:1.10.10.1100 423 477 1.1E-11 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 4.1E-14 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 SUPERFAMILY SSF51905 145 309 6.15E-27 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 8.3E-54 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 2.6E-11 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.6E-11 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.6E-11 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.6E-11 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 7.0E-16 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.0E-16 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.0E-16 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 7.0E-16 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.0E-16 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Gene3D G3DSA:3.50.50.60 7 283 4.4E-83 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 770 1.8E-15 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 SUPERFAMILY SSF51905 3 186 5.12E-41 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 1.1E-9 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Gene3D G3DSA:3.50.50.60 110 246 4.4E-83 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.3E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.3E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 SUPERFAMILY SSF55124 502 629 1.8E-30 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 Gene3D G3DSA:3.30.413.10 631 785 1.2E-31 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 PIRSF PIRSF037149 1 835 0.0 T 15-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 SUPERFAMILY SSF56014 633 808 7.33E-48 T 15-10-2018 VIBNI_B2168 2dd693bb671ae38dcf667f8bad7b766f 852 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 15-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 Gene3D G3DSA:3.40.50.970 55 471 4.0E-131 T 15-10-2018 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 Gene3D G3DSA:3.40.50.920 707 887 1.6E-70 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 Gene3D G3DSA:3.40.50.970 472 706 3.5E-111 T 15-10-2018 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 SUPERFAMILY SSF52922 702 886 5.65E-59 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 SUPERFAMILY SSF52518 474 701 9.77E-97 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 SUPERFAMILY SSF52518 56 469 1.7E-139 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 PIRSF PIRSF000156 1 887 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VIBNI_A0181 834c1ade030382bfd696434ca1e28512 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 3.1E-9 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 Gene3D G3DSA:3.40.50.1370 151 319 4.7E-141 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 Gene3D G3DSA:3.40.50.1370 5 329 4.7E-141 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 80.931 T 15-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.5E-130 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.3E-44 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.2E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.2E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.2E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.2E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 5.2E-32 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 9.0E-56 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.9E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.9E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.9E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.9E-26 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3124 f9cd89bf3b100db114532e8864134fda 334 SUPERFAMILY SSF53671 4 333 2.1E-96 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 SMART SM00530 6 61 3.6E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 SUPERFAMILY SSF51306 118 205 6.02E-19 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 Gene3D G3DSA:1.10.260.40 1 65 1.2E-15 T 15-10-2018 VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 Pfam PF01381 Helix-turn-helix 24 61 2.5E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 Gene3D G3DSA:2.10.109.10 82 206 1.1E-27 T 15-10-2018 VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 Pfam PF00717 Peptidase S24-like 125 192 1.9E-12 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VIBNI_A1606 4ddf8b5026d3818fed9a71159347f80c 211 SUPERFAMILY SSF47413 1 66 1.38E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 SMART SM00448 9 119 1.8E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 SUPERFAMILY SSF52172 9 134 2.13E-35 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 SUPERFAMILY SSF46894 139 239 4.82E-26 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 Gene3D G3DSA:1.10.10.10 136 243 3.8E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 Pfam PF00072 Response regulator receiver domain 11 120 2.1E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 1.0E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 Gene3D G3DSA:3.40.50.2300 7 133 4.0E-33 T 15-10-2018 VIBNI_A1129 4cbd6a2beff9409d4f814dfe109d7462 246 SMART SM00862 162 238 1.1E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 Gene3D G3DSA:3.10.450.70 21 79 1.1E-15 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 SUPERFAMILY SSF54423 29 83 1.94E-11 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 Gene3D G3DSA:3.40.30.10 80 240 3.1E-45 T 15-10-2018 VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 Pfam PF13098 Thioredoxin-like domain 109 237 1.1E-27 T 15-10-2018 IPR012336 Thioredoxin-like fold VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 SUPERFAMILY SSF52833 98 239 3.67E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0318 210cbf7abfaddfeff713131e21a71012 241 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 82 2.2E-12 T 15-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 Gene3D G3DSA:3.30.565.10 217 368 3.0E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 367 9.9E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 Pfam PF00072 Response regulator receiver domain 4 115 2.5E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 Gene3D G3DSA:3.40.50.2300 2 125 7.9E-36 T 15-10-2018 VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 SUPERFAMILY SSF55874 221 367 3.01E-19 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 SUPERFAMILY SSF52172 3 133 1.71E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 SMART SM00448 2 115 8.6E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0318 7590194ef5a493c4184639c3067af7ad 369 Gene3D G3DSA:1.10.287.130 126 215 4.1E-7 T 15-10-2018 VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 SUPERFAMILY SSF51735 111 295 1.4E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 Gene3D G3DSA:3.40.50.720 13 312 6.7E-102 T 15-10-2018 VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 SUPERFAMILY SSF52283 54 138 3.4E-9 T 15-10-2018 VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 313 1.1E-5 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 294 1.2E-38 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A0787 df31834c31a4c875c0a0ac692cffca5a 343 Gene3D G3DSA:3.40.50.720 109 295 6.7E-102 T 15-10-2018 VIBNI_A2945 a468a020fcea95d2cff1e6dcc587ba85 545 Pfam PF00501 AMP-binding enzyme 66 446 6.4E-72 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2945 a468a020fcea95d2cff1e6dcc587ba85 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 523 1.0E-5 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A2945 a468a020fcea95d2cff1e6dcc587ba85 545 Gene3D G3DSA:3.40.50.12780 54 439 8.4E-99 T 15-10-2018 VIBNI_A2945 a468a020fcea95d2cff1e6dcc587ba85 545 SUPERFAMILY SSF56801 30 536 2.75E-115 T 15-10-2018 VIBNI_A2945 a468a020fcea95d2cff1e6dcc587ba85 545 Gene3D G3DSA:3.30.300.30 440 541 8.2E-20 T 15-10-2018 VIBNI_A1579 1ade3cfb0ea4336fb78b748463ca70b7 262 SUPERFAMILY SSF141868 20 256 6.93E-44 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1579 1ade3cfb0ea4336fb78b748463ca70b7 262 Pfam PF00563 EAL domain 26 252 5.1E-37 T 15-10-2018 IPR001633 EAL domain VIBNI_A1579 1ade3cfb0ea4336fb78b748463ca70b7 262 SMART SM00052 1 257 4.2E-12 T 15-10-2018 IPR001633 EAL domain VIBNI_A1579 1ade3cfb0ea4336fb78b748463ca70b7 262 Gene3D G3DSA:3.20.20.450 19 260 1.3E-43 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SUPERFAMILY SSF53955 110 261 4.16E-41 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SUPERFAMILY SSF54106 415 459 2.49E-11 T 15-10-2018 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Gene3D G3DSA:3.10.350.10 334 393 3.8E-14 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SUPERFAMILY SSF54106 470 517 1.24E-10 T 15-10-2018 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Pfam PF01464 Transglycosylase SLT domain 125 224 2.0E-24 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SUPERFAMILY SSF54106 340 384 2.75E-10 T 15-10-2018 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Gene3D G3DSA:3.10.350.10 471 518 1.0E-13 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Gene3D G3DSA:3.10.350.10 412 465 2.5E-16 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Gene3D G3DSA:1.10.530.10 107 260 2.6E-31 T 15-10-2018 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SMART SM00257 415 459 8.7E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SMART SM00257 341 384 5.2E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 SMART SM00257 472 516 6.7E-11 T 15-10-2018 IPR018392 LysM domain VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 131 159 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Pfam PF01476 LysM domain 416 459 8.0E-13 T 15-10-2018 IPR018392 LysM domain VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Pfam PF01476 LysM domain 342 384 4.1E-12 T 15-10-2018 IPR018392 LysM domain VIBNI_A2481 70eb4f86951d52ef36325651e33953cc 524 Pfam PF01476 LysM domain 473 515 8.7E-12 T 15-10-2018 IPR018392 LysM domain VIBNI_A0660 a9bfebb2e90dc080f68c115812e4b920 155 Pfam PF01029 NusB family 11 149 8.3E-35 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VIBNI_A0660 a9bfebb2e90dc080f68c115812e4b920 155 SUPERFAMILY SSF48013 7 153 2.09E-38 T 15-10-2018 IPR035926 NusB-like superfamily VIBNI_A0660 a9bfebb2e90dc080f68c115812e4b920 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.03 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 VIBNI_A0660 a9bfebb2e90dc080f68c115812e4b920 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 3.9E-42 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 VIBNI_A0660 a9bfebb2e90dc080f68c115812e4b920 155 Gene3D G3DSA:1.10.940.10 3 155 1.9E-47 T 15-10-2018 IPR035926 NusB-like superfamily VIBNI_A2044 e5872612e7b3ef0b13602fe3e2f6fd18 430 SUPERFAMILY SSF52172 6 138 3.27E-19 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2044 e5872612e7b3ef0b13602fe3e2f6fd18 430 Gene3D G3DSA:3.40.50.2300 3 146 1.4E-18 T 15-10-2018 VIBNI_A2044 e5872612e7b3ef0b13602fe3e2f6fd18 430 Pfam PF00072 Response regulator receiver domain 10 126 9.2E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2044 e5872612e7b3ef0b13602fe3e2f6fd18 430 SMART SM00448 8 126 1.3E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 SMART SM00245 326 527 1.1E-68 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 SMART SM00228 246 323 1.2E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 198 547 4.4E-113 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 662 2.7E-38 T 15-10-2018 IPR020992 Tail specific protease, C-terminal VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 SUPERFAMILY SSF50156 217 339 2.01E-14 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Gene3D G3DSA:3.90.226.10 323 546 1.9E-57 T 15-10-2018 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Pfam PF03572 Peptidase family S41 356 525 3.3E-52 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Gene3D G3DSA:2.30.42.10 236 320 4.2E-12 T 15-10-2018 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 3.9E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 Pfam PF08180 B melanoma antigen family 9 36 2.1E-12 T 15-10-2018 IPR012530 B melanoma antigen-like VIBNI_A1792 3bca7f6da9e31fb67f4085ac1cb40feb 667 SUPERFAMILY SSF52096 166 532 9.77E-74 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A3742 d751aa9634dee4c91b1dc0a7c29f726c 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 190 3.5E-29 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VIBNI_A3742 d751aa9634dee4c91b1dc0a7c29f726c 197 Pfam PF01914 MarC family integral membrane protein 4 193 1.5E-53 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 203 4.1E-49 T 15-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 Gene3D G3DSA:3.40.50.1000 6 215 1.0E-53 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 2.3E-29 T 15-10-2018 VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 2.8E-26 T 15-10-2018 VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 Gene3D G3DSA:1.20.1440.100 17 90 1.0E-53 T 15-10-2018 VIBNI_A1318 833b5ba796478b4c79e40aa0c0483092 218 SUPERFAMILY SSF56784 1 201 5.29E-29 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 Gene3D G3DSA:3.30.360.10 130 316 7.4E-154 T 15-10-2018 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 PIRSF PIRSF000148 4 337 6.6E-136 T 15-10-2018 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.696 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 SUPERFAMILY SSF55347 131 320 2.32E-78 T 15-10-2018 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 SMART SM00859 6 121 3.4E-41 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 SUPERFAMILY SSF51735 5 159 6.23E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 Gene3D G3DSA:3.40.50.720 7 330 7.4E-154 T 15-10-2018 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 7.3E-33 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.4E-132 T 15-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 15-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0801 3886bf6a8192317aa542b7835ca85282 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 5.8E-64 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_B0508 8275e854568209709d05a98e353ad071 221 SUPERFAMILY SSF51182 119 216 3.07E-9 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0508 8275e854568209709d05a98e353ad071 221 Pfam PF12973 ChrR Cupin-like domain 134 213 5.1E-7 T 15-10-2018 IPR025979 ChrR-like cupin domain VIBNI_B0508 8275e854568209709d05a98e353ad071 221 Pfam PF12973 ChrR Cupin-like domain 20 109 1.7E-32 T 15-10-2018 IPR025979 ChrR-like cupin domain VIBNI_B0508 8275e854568209709d05a98e353ad071 221 SUPERFAMILY SSF51182 4 113 7.37E-22 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0508 8275e854568209709d05a98e353ad071 221 Gene3D G3DSA:2.60.120.10 1 216 1.3E-62 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 340 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 324 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 7.2E-36 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 Gene3D G3DSA:3.40.30.120 377 478 2.9E-9 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 SUPERFAMILY SSF51905 5 345 9.22E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 SUPERFAMILY SSF54373 180 264 2.59E-23 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 Gene3D G3DSA:3.30.9.50 73 262 6.2E-88 T 15-10-2018 VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 Gene3D G3DSA:3.50.50.60 6 336 6.2E-88 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3569 a5af5ebec231dbccc5296762a1681bfe 480 Pfam PF01494 FAD binding domain 5 338 1.4E-66 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 Pfam PF05147 Lanthionine synthetase C-like protein 30 393 2.4E-34 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 Gene3D G3DSA:1.50.10.20 4 395 3.5E-46 T 15-10-2018 VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 SMART SM01260 27 393 1.5E-29 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 364 381 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 124 139 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 189 205 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 76 94 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 253 273 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 PRINTS PR01950 LanC-like protein superfamily signature 303 316 8.9E-14 T 15-10-2018 IPR007822 Lanthionine synthetase C-like VIBNI_B1813 e727cfe62c06e327bb39fb3711b65769 395 SUPERFAMILY SSF158745 12 395 3.53E-48 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 785 2.8E-154 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 SUPERFAMILY SSF55008 85 162 1.02E-17 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Pfam PF00122 E1-E2 ATPase 319 478 2.9E-45 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 SUPERFAMILY SSF81653 319 402 5.62E-23 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Gene3D G3DSA:2.70.150.20 290 407 1.2E-31 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 763 4.4E-76 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 785 8.4E-160 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Gene3D G3DSA:3.30.70.100 88 173 2.3E-14 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 696 1.9E-28 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 683 705 - T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 2.4E-25 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 641 2.4E-25 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 702 2.4E-25 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 718 2.4E-25 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 2.4E-25 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 SUPERFAMILY SSF56784 500 783 2.72E-45 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 1.2E-27 T 15-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Pfam PF00403 Heavy-metal-associated domain 93 154 5.1E-9 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 SUPERFAMILY SSF81665 250 768 2.35E-11 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 787 1.2E-119 T 15-10-2018 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Gene3D G3DSA:3.40.1110.10 512 616 8.5E-64 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VIBNI_A1741 36d94e7096e5b8c03b10d232fac85d50 790 Gene3D G3DSA:3.40.50.1000 482 735 8.5E-64 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 SMART SM00861 353 524 3.8E-66 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 8.2E-20 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 4.3E-166 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 SUPERFAMILY SSF52518 5 328 1.98E-120 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 1.0E-46 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 SUPERFAMILY SSF52922 532 663 1.44E-43 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Gene3D G3DSA:3.40.50.970 1 324 1.9E-131 T 15-10-2018 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Gene3D G3DSA:3.40.50.920 537 663 1.1E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 SUPERFAMILY SSF52518 332 525 2.18E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 Gene3D G3DSA:3.40.50.970 325 536 1.8E-83 T 15-10-2018 VIBNI_B1015 83cf039a68b2d220356a416d2065577e 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 7.5E-36 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 626 45.038 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 SUPERFAMILY SSF52922 493 625 3.4E-29 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Pfam PF02780 Transketolase, C-terminal domain 507 617 3.4E-24 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Gene3D G3DSA:3.40.50.970 318 491 8.2E-64 T 15-10-2018 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 625 6.6E-291 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 SUPERFAMILY SSF52518 319 505 2.59E-56 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 SUPERFAMILY SSF52518 9 382 5.29E-72 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Gene3D G3DSA:3.40.50.920 496 627 4.3E-40 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 SMART SM00861 320 484 3.6E-62 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 ProSitePatterns PS00802 Transketolase signature 2. 426 442 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A0663 bb78622803de677b72e4bddf4c76d4c5 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.0E-117 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 Pfam PF05099 Tellurite resistance protein TerB 51 177 2.2E-16 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 Gene3D G3DSA:1.10.287.110 196 285 4.9E-15 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 SUPERFAMILY SSF46565 138 283 4.29E-31 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 SMART SM00271 220 285 3.8E-17 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 Pfam PF00226 DnaJ domain 221 283 5.4E-11 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 286 39.66 T 15-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 PRINTS PR00625 DnaJ domain signature 241 256 7.2E-9 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 PRINTS PR00625 DnaJ domain signature 265 285 7.2E-9 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 PRINTS PR00625 DnaJ domain signature 223 241 7.2E-9 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2914 b3e6cd0d3d8fe1f14265ac943ebe2336 287 Gene3D G3DSA:1.10.3680.10 43 191 2.5E-25 T 15-10-2018 IPR029024 TerB-like VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 SMART SM00487 196 395 1.4E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 24.604 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 SUPERFAMILY SSF52540 72 379 1.35E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 SUPERFAMILY SSF52540 461 614 5.66E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 SMART SM00490 492 589 6.3E-11 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 Pfam PF00271 Helicase conserved C-terminal domain 504 588 5.7E-7 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 Gene3D G3DSA:3.40.50.300 185 379 4.1E-78 T 15-10-2018 VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 Gene3D G3DSA:1.10.8.630 4 113 5.3E-34 T 15-10-2018 VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.4E-187 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VIBNI_A3604 7e9982f7ab02071374280fc3ae84a5b7 733 Pfam PF00270 DEAD/DEAH box helicase 216 364 4.2E-15 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 Pfam PF08281 Sigma-70, region 4 100 150 1.1E-6 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 Gene3D G3DSA:1.10.10.10 74 157 7.4E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 153 2.0E-19 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 SUPERFAMILY SSF88659 94 155 6.54E-8 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 29 60 - T 15-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 Pfam PF04542 Sigma-70 region 2 8 74 3.1E-13 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 SUPERFAMILY SSF88946 3 91 2.86E-19 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 8 175 6.4E-53 T 15-10-2018 IPR014304 RNA polymerase sigma-Z type VIBNI_B1418 37fcbed1390ce1e63712314722b1585e 181 Gene3D G3DSA:1.10.1740.10 1 73 9.7E-17 T 15-10-2018 VIBNI_A1631 390288cc79680223dc8d310baef94da8 118 Pfam PF06530 Phage antitermination protein Q 12 106 3.9E-6 T 15-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 VIBNI_A2954 c4b680e7a08cead47a9530977759e5e1 187 Gene3D G3DSA:2.60.450.10 59 187 4.6E-35 T 15-10-2018 VIBNI_A2954 c4b680e7a08cead47a9530977759e5e1 187 PIRSF PIRSF028513 4 186 1.7E-26 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VIBNI_A2954 c4b680e7a08cead47a9530977759e5e1 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 8.6E-41 T 15-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VIBNI_A2954 c4b680e7a08cead47a9530977759e5e1 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 182 2.1E-42 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VIBNI_A2954 c4b680e7a08cead47a9530977759e5e1 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 22.595 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Pfam PF12804 MobA-like NTP transferase domain 5 127 5.8E-22 T 15-10-2018 IPR025877 MobA-like NTP transferase VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Gene3D G3DSA:2.160.10.10 225 453 1.3E-71 T 15-10-2018 VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Gene3D G3DSA:3.90.550.10 1 224 1.1E-67 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 SUPERFAMILY SSF53448 1 249 9.75E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 330 6.4E-5 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 3.6E-6 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.5E-7 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.9E-204 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 SUPERFAMILY SSF51161 252 434 5.53E-52 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A3859 31f5387b68c4bea4766b3d6d07be6e90 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.49 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VIBNI_A3384 a4eadfb8c84f848702d90659de34e0ed 642 Pfam PF05170 AsmA family 2 542 7.5E-76 T 15-10-2018 IPR007844 AsmA VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 SUPERFAMILY SSF53697 6 548 1.17E-224 T 15-10-2018 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 Gene3D G3DSA:3.40.50.10490 99 292 4.8E-242 T 15-10-2018 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 Gene3D G3DSA:1.10.1390.10 508 550 8.0E-20 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 Gene3D G3DSA:3.40.50.10490 13 507 4.8E-242 T 15-10-2018 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.3E-254 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3540 91a189506a084ec6f766847e3b1770d6 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.101 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 Pfam PF04389 Peptidase family M28 272 526 6.8E-33 T 15-10-2018 IPR007484 Peptidase M28 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 Gene3D G3DSA:3.50.30.30 126 258 7.9E-26 T 15-10-2018 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 Gene3D G3DSA:3.40.630.10 29 125 1.6E-5 T 15-10-2018 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 SUPERFAMILY SSF53187 36 541 4.19E-57 T 15-10-2018 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 SUPERFAMILY SSF52025 134 254 1.83E-18 T 15-10-2018 VIBNI_A1319 8c5986d89fbb6e1f8b324d4fa6afaaa7 600 Pfam PF02225 PA domain 143 245 2.0E-17 T 15-10-2018 IPR003137 PA domain VIBNI_B0873 770154748c0e4c1adc61089b3a53fa4d 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 264 7.4E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0873 770154748c0e4c1adc61089b3a53fa4d 290 Gene3D G3DSA:1.10.3720.10 7 275 4.7E-38 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0873 770154748c0e4c1adc61089b3a53fa4d 290 SUPERFAMILY SSF161098 43 262 1.13E-41 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0399 1018afe1e0382aadf037e35f87acf118 425 PIRSF PIRSF006066 1 425 4.3E-147 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0399 1018afe1e0382aadf037e35f87acf118 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 9.7E-128 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0399 1018afe1e0382aadf037e35f87acf118 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 420 1.3E-133 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A0969 685143283641f4609e5e32f14f264553 338 Gene3D G3DSA:3.40.50.970 1 203 2.5E-87 T 15-10-2018 VIBNI_A0969 685143283641f4609e5e32f14f264553 338 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 2.7E-43 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0969 685143283641f4609e5e32f14f264553 338 Pfam PF02780 Transketolase, C-terminal domain 210 327 1.1E-32 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0969 685143283641f4609e5e32f14f264553 338 SUPERFAMILY SSF52518 1 220 7.85E-69 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0969 685143283641f4609e5e32f14f264553 338 SMART SM00861 4 179 2.5E-63 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0969 685143283641f4609e5e32f14f264553 338 SUPERFAMILY SSF52922 205 335 1.44E-40 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0969 685143283641f4609e5e32f14f264553 338 Gene3D G3DSA:3.40.50.920 204 337 2.1E-54 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A2071 ee72fb38223b39a10191af50943c7b9e 417 Gene3D G3DSA:3.40.50.720 4 398 2.9E-144 T 15-10-2018 VIBNI_A2071 ee72fb38223b39a10191af50943c7b9e 417 Gene3D G3DSA:3.30.360.10 159 355 2.9E-144 T 15-10-2018 VIBNI_A2071 ee72fb38223b39a10191af50943c7b9e 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 5.6E-30 T 15-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VIBNI_A2071 ee72fb38223b39a10191af50943c7b9e 417 SUPERFAMILY SSF51735 3 179 1.44E-15 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2071 ee72fb38223b39a10191af50943c7b9e 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 6.3E-33 T 15-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VIBNI_A1420 9f756472273718499632261ce449aca1 237 SUPERFAMILY SSF48498 82 213 6.67E-14 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A1420 9f756472273718499632261ce449aca1 237 SUPERFAMILY SSF46689 2 73 8.48E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1420 9f756472273718499632261ce449aca1 237 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.2E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1420 9f756472273718499632261ce449aca1 237 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.2E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1420 9f756472273718499632261ce449aca1 237 Gene3D G3DSA:1.10.357.10 6 210 7.2E-33 T 15-10-2018 VIBNI_A1420 9f756472273718499632261ce449aca1 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.7E-16 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1420 9f756472273718499632261ce449aca1 237 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_A3525 72809bccc5a986ab23dc4039a50c7174 219 Gene3D G3DSA:3.40.50.300 1 215 1.2E-19 T 15-10-2018 VIBNI_A3525 72809bccc5a986ab23dc4039a50c7174 219 SUPERFAMILY SSF52540 4 208 7.16E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 SUPERFAMILY SSF46785 1 82 1.96E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.6E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 Gene3D G3DSA:3.40.190.290 90 289 3.2E-69 T 15-10-2018 VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 SUPERFAMILY SSF53850 88 288 1.99E-38 T 15-10-2018 VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 Gene3D G3DSA:1.10.10.10 1 89 1.2E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0810 9d62ccd9ef8ef7eb5bebe09b182d3a43 291 Pfam PF03466 LysR substrate binding domain 88 287 3.5E-43 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0110 813ae2d676f416b819945dfcf09055a1 319 Gene3D G3DSA:3.30.200.100 218 317 1.3E-28 T 15-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VIBNI_A0110 813ae2d676f416b819945dfcf09055a1 319 PIRSF PIRSF005427 1 318 1.1E-86 T 15-10-2018 IPR005588 MucB/RseB VIBNI_A0110 813ae2d676f416b819945dfcf09055a1 319 Gene3D G3DSA:2.50.20.10 24 208 7.7E-54 T 15-10-2018 VIBNI_A0110 813ae2d676f416b819945dfcf09055a1 319 Pfam PF03888 MucB/RseB N-terminal domain 25 193 1.1E-60 T 15-10-2018 IPR033434 MucB/RseB, N-terminal VIBNI_A0110 813ae2d676f416b819945dfcf09055a1 319 Pfam PF17188 MucB/RseB C-terminal domain 217 311 2.4E-27 T 15-10-2018 IPR033436 MucB/RseB, C-terminal VIBNI_A3445 9c304fdc44f4cf1d425710d615c8f74c 475 SMART SM00382 123 288 0.0063 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3445 9c304fdc44f4cf1d425710d615c8f74c 475 Pfam PF13401 AAA domain 127 270 2.1E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3445 9c304fdc44f4cf1d425710d615c8f74c 475 SUPERFAMILY SSF52540 123 362 3.48E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3445 9c304fdc44f4cf1d425710d615c8f74c 475 Gene3D G3DSA:3.40.50.300 116 285 1.5E-14 T 15-10-2018 VIBNI_A2023 9c304fdc44f4cf1d425710d615c8f74c 475 SMART SM00382 123 288 0.0063 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2023 9c304fdc44f4cf1d425710d615c8f74c 475 Pfam PF13401 AAA domain 127 270 2.1E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2023 9c304fdc44f4cf1d425710d615c8f74c 475 SUPERFAMILY SSF52540 123 362 3.48E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2023 9c304fdc44f4cf1d425710d615c8f74c 475 Gene3D G3DSA:3.40.50.300 116 285 1.5E-14 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 Gene3D G3DSA:3.30.70.260 1 85 3.9E-24 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 SUPERFAMILY SSF55021 3 83 3.87E-16 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 Gene3D G3DSA:3.30.70.260 87 180 1.2E-40 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 SUPERFAMILY SSF55021 87 176 9.49E-23 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 Pfam PF13740 ACT domain 3 78 1.7E-24 T 15-10-2018 VIBNI_A0690 2c0918f5f1f10651a5ca0bd31f527e47 180 PIRSF PIRSF028103 1 178 4.4E-59 T 15-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Gene3D G3DSA:1.10.8.60 316 389 1.0E-18 T 15-10-2018 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 SMART SM00448 2 114 3.1E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Gene3D G3DSA:3.40.50.2300 1 129 1.5E-35 T 15-10-2018 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 SUPERFAMILY SSF52540 144 374 1.14E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 SUPERFAMILY SSF46689 390 439 6.27E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Pfam PF00158 Sigma-54 interaction domain 144 310 1.5E-70 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Gene3D G3DSA:1.10.10.60 390 442 7.3E-13 T 15-10-2018 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 SUPERFAMILY SSF52172 1 188 1.42E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Pfam PF00072 Response regulator receiver domain 5 114 2.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 SMART SM00382 164 307 2.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 1.3E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A2431 15eca5f0a9fb0f8147dff469cf0219ca 445 Gene3D G3DSA:3.40.50.300 130 315 2.1E-62 T 15-10-2018 VIBNI_A2911 b3ae2a9ea151917847539c20e0079587 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.956 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VIBNI_A2911 b3ae2a9ea151917847539c20e0079587 200 SUPERFAMILY SSF52016 1 194 4.12E-59 T 15-10-2018 VIBNI_A2911 b3ae2a9ea151917847539c20e0079587 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.4E-99 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VIBNI_A2911 b3ae2a9ea151917847539c20e0079587 200 Gene3D G3DSA:3.20.19.10 1 180 8.8E-77 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VIBNI_A2911 b3ae2a9ea151917847539c20e0079587 200 Pfam PF00694 Aconitase C-terminal domain 1 125 5.5E-39 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 4 644 3.3E-203 T 15-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 Pfam PF00501 AMP-binding enzyme 92 521 1.1E-46 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 Gene3D G3DSA:3.40.50.12780 74 516 7.3E-53 T 15-10-2018 VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 Gene3D G3DSA:3.30.300.30 519 643 1.4E-12 T 15-10-2018 VIBNI_A1228 ae7a292eb66d27662ff995c10df05357 647 SUPERFAMILY SSF56801 29 635 5.36E-105 T 15-10-2018 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 SUPERFAMILY SSF55282 4 179 3.06E-78 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.015 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 PIRSF PIRSF002161 1 179 5.9E-66 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 15-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.3E-41 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3166 b47738765fb747105956ee6b10c475ec 179 Gene3D G3DSA:3.30.1440.10 1 179 5.9E-81 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A1411 d02fde8e070fcb3ef18e4db9940716cd 256 Gene3D G3DSA:3.30.460.10 72 196 3.9E-6 T 15-10-2018 VIBNI_A1411 d02fde8e070fcb3ef18e4db9940716cd 256 SMART SM00954 103 211 0.0094 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 VIBNI_A1411 d02fde8e070fcb3ef18e4db9940716cd 256 SUPERFAMILY SSF81301 64 216 5.07E-15 T 15-10-2018 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 43.344 T 15-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 Gene3D G3DSA:3.40.640.10 58 283 2.7E-118 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 Gene3D G3DSA:3.90.1150.10 41 372 2.7E-118 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 376 4.0E-129 T 15-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 Pfam PF00155 Aminotransferase class I and II 41 376 5.7E-46 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A2317 d7cb2a06fd8427c603535eb0bca80474 385 SUPERFAMILY SSF53383 4 379 2.7E-98 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 104 0.0016 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 161 1.4E-6 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 SMART SM01266 4 56 3.2E-9 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 Pfam PF12464 Maltose acetyltransferase 6 54 9.7E-7 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 SUPERFAMILY SSF51161 42 184 2.22E-41 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_B1816 fd8aa24eaf41f5816a76e6d1bd1abc21 191 Gene3D G3DSA:2.160.10.10 1 188 8.0E-61 T 15-10-2018 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 186 6.9E-15 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 1.5E-27 T 15-10-2018 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 Gene3D G3DSA:1.10.150.240 19 86 1.3E-42 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 SUPERFAMILY SSF56784 3 212 4.61E-44 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 Gene3D G3DSA:3.40.50.1000 7 194 1.3E-42 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 4.9E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 4.9E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 4.9E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0905 cd6dff6bdd8c6d52d642c30e5d8f1234 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 4.9E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0292 3621db10e289f7529a664fe4fa4f519e 327 SUPERFAMILY SSF53807 24 318 5.1E-36 T 15-10-2018 VIBNI_B0292 3621db10e289f7529a664fe4fa4f519e 327 Gene3D G3DSA:3.40.50.1980 153 320 3.2E-37 T 15-10-2018 VIBNI_B0292 3621db10e289f7529a664fe4fa4f519e 327 Gene3D G3DSA:3.40.50.1980 16 146 6.8E-34 T 15-10-2018 VIBNI_B0292 3621db10e289f7529a664fe4fa4f519e 327 Pfam PF01497 Periplasmic binding protein 52 296 2.4E-18 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_B1198 07b859a8505bf36fac8fe701849acbd6 258 SUPERFAMILY SSF141868 32 255 1.14E-38 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1198 07b859a8505bf36fac8fe701849acbd6 258 Gene3D G3DSA:3.20.20.450 23 254 9.6E-40 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1198 07b859a8505bf36fac8fe701849acbd6 258 Pfam PF00563 EAL domain 30 251 5.8E-38 T 15-10-2018 IPR001633 EAL domain VIBNI_B1198 07b859a8505bf36fac8fe701849acbd6 258 SMART SM00052 1 256 4.3E-11 T 15-10-2018 IPR001633 EAL domain VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-42 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 SUPERFAMILY SSF64518 1 376 1.96E-95 T 15-10-2018 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Gene3D G3DSA:1.10.8.410 329 376 6.6E-17 T 15-10-2018 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Gene3D G3DSA:1.20.1330.10 45 177 1.8E-74 T 15-10-2018 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 PRINTS PR00207 Flagellin signature 111 134 2.6E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 PRINTS PR00207 Flagellin signature 37 54 2.6E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 PRINTS PR00207 Flagellin signature 76 95 2.6E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Gene3D G3DSA:1.20.58.1830 5 33 1.8E-74 T 15-10-2018 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 7.3E-24 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Pfam PF07196 Flagellin hook IN motif 196 248 1.3E-9 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0704 2cfdcdabf6b8b1640a6d5d894a3ed7e6 377 Gene3D G3DSA:1.20.1330.10 193 328 3.2E-18 T 15-10-2018 VIBNI_A3268 1bcdc9874c4f661b7370e677d92fc505 347 Pfam PF01548 Transposase 12 156 3.5E-15 T 15-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VIBNI_A3268 1bcdc9874c4f661b7370e677d92fc505 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 304 2.0E-19 T 15-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 329 7.1E-32 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 Gene3D G3DSA:3.40.50.720 3 318 6.7E-132 T 15-10-2018 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 SUPERFAMILY SSF52283 1 136 1.3E-41 T 15-10-2018 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 Gene3D G3DSA:3.40.50.720 103 298 6.7E-132 T 15-10-2018 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 8.1E-52 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_B1236 553f809c4d95ab29ce3677eeb0091d3a 331 SUPERFAMILY SSF51735 103 299 4.47E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 SMART SM00448 5 117 8.0E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 Gene3D G3DSA:3.40.50.2300 2 137 3.7E-33 T 15-10-2018 VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 Gene3D G3DSA:2.40.50.40 155 226 1.4E-10 T 15-10-2018 VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 Pfam PF04397 LytTr DNA-binding domain 162 260 6.4E-25 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 SMART SM00850 162 261 2.5E-25 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 SUPERFAMILY SSF52172 6 137 1.04E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1322 3b356e318cd878bbaf88a6c1f68a3d11 261 Pfam PF00072 Response regulator receiver domain 8 117 5.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0044 a2dfe77aa522075d017128595a8bb9d7 378 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VIBNI_A0044 a2dfe77aa522075d017128595a8bb9d7 378 SUPERFAMILY SSF53955 183 370 1.32E-36 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A0044 a2dfe77aa522075d017128595a8bb9d7 378 Pfam PF11873 Domain of unknown function (DUF3393) 3 206 4.4E-79 T 15-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VIBNI_A0044 a2dfe77aa522075d017128595a8bb9d7 378 Gene3D G3DSA:1.10.530.10 190 370 5.5E-50 T 15-10-2018 VIBNI_A0044 a2dfe77aa522075d017128595a8bb9d7 378 Pfam PF01464 Transglycosylase SLT domain 211 332 1.8E-28 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 Pfam PF01715 IPP transferase 42 287 3.6E-86 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 Gene3D G3DSA:1.10.20.140 115 186 4.0E-107 T 15-10-2018 VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 Gene3D G3DSA:3.40.50.300 12 292 4.0E-107 T 15-10-2018 VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 SUPERFAMILY SSF52540 10 152 2.19E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 1.4E-114 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VIBNI_A3219 61eef1fceb71455df2164675543f285a 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.233 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 PIRSF PIRSF001365 1 296 2.7E-53 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 Pfam PF00701 Dihydrodipicolinate synthetase family 2 292 2.2E-31 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 SMART SM01130 1 294 4.3E-54 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 Gene3D G3DSA:3.20.20.70 1 296 2.2E-70 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 7.7E-6 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 7.7E-6 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 7.7E-6 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B0295 762d9b03c5025c1882cce177d25ae617 296 SUPERFAMILY SSF51569 1 294 9.32E-56 T 15-10-2018 VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SUPERFAMILY SSF55073 430 570 3.61E-11 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Pfam PF10442 FIST C domain 227 349 1.4E-9 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SMART SM00267 413 588 1.8E-4 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SMART SM00897 27 224 3.2E-20 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Gene3D G3DSA:3.30.70.270 409 585 2.3E-15 T 15-10-2018 VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SUPERFAMILY SSF141868 607 835 1.24E-54 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SMART SM00052 599 837 1.1E-37 T 15-10-2018 IPR001633 EAL domain VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Gene3D G3DSA:3.20.20.450 604 839 6.2E-58 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Pfam PF00563 EAL domain 606 832 2.2E-55 T 15-10-2018 IPR001633 EAL domain VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Pfam PF08495 FIST N domain 29 222 1.8E-20 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 485 9.7E-8 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3763 020bb8dcc2d02ea5ab04c5c1c4b0cf0f 843 SMART SM01204 225 351 2.5E-12 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 Pfam PF13377 Periplasmic binding protein-like domain 175 332 1.1E-28 T 15-10-2018 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 Gene3D G3DSA:3.40.50.2300 73 324 8.5E-51 T 15-10-2018 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 Gene3D G3DSA:3.40.50.2300 164 329 8.5E-51 T 15-10-2018 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 SUPERFAMILY SSF47413 1 58 2.25E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 SMART SM00354 1 73 1.7E-23 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 Gene3D G3DSA:1.10.260.40 1 59 3.5E-21 T 15-10-2018 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 VIBNI_A3421 e1635279d340f578e427b1621edce6db 336 SUPERFAMILY SSF53822 62 333 6.34E-55 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1806 52c3dcb619997fd15868903c4511d4fe 342 Gene3D G3DSA:3.40.190.10 33 242 1.1E-49 T 15-10-2018 VIBNI_A1806 52c3dcb619997fd15868903c4511d4fe 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.2E-28 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A1806 52c3dcb619997fd15868903c4511d4fe 342 SUPERFAMILY SSF53850 29 259 9.77E-49 T 15-10-2018 VIBNI_A1806 52c3dcb619997fd15868903c4511d4fe 342 SMART SM00062 38 267 2.2E-49 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A1806 52c3dcb619997fd15868903c4511d4fe 342 Gene3D G3DSA:3.40.190.10 125 230 1.1E-49 T 15-10-2018 VIBNI_B1301 6676a91621fc0cdeb8270ab9d4adc7fc 152 Gene3D G3DSA:1.10.1130.10 65 132 2.7E-29 T 15-10-2018 VIBNI_B1301 6676a91621fc0cdeb8270ab9d4adc7fc 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 4.4E-49 T 15-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VIBNI_B1301 6676a91621fc0cdeb8270ab9d4adc7fc 152 PIRSF PIRSF006105 1 152 1.5E-47 T 15-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VIBNI_B1301 6676a91621fc0cdeb8270ab9d4adc7fc 152 SUPERFAMILY SSF48695 36 149 3.39E-41 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 SUPERFAMILY SSF51419 2 228 4.71E-81 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 5.9E-84 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 PIRSF PIRSF004848 1 236 4.2E-76 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 1.1E-32 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.31 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VIBNI_A0055 e8014cf62187cc8160fc39542355831a 236 Gene3D G3DSA:3.20.20.10 2 236 4.3E-86 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 Gene3D G3DSA:1.10.287.950 320 652 1.2E-71 T 15-10-2018 VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 SUPERFAMILY SSF58104 343 652 1.96E-74 T 15-10-2018 VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 SMART SM00304 321 375 4.0E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 SMART SM00283 390 651 3.6E-74 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 452 618 1.0E-45 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1558 53315929e5d1f38372182ac6717084f6 652 SMART SM01358 38 292 4.2E-51 T 15-10-2018 IPR032255 Helical bimodular sensor domain VIBNI_A3203 adf12ac6ffaa77b0796241ea9241c52a 339 Pfam PF00561 alpha/beta hydrolase fold 58 297 4.6E-15 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A3203 adf12ac6ffaa77b0796241ea9241c52a 339 SUPERFAMILY SSF53474 22 296 3.44E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3203 adf12ac6ffaa77b0796241ea9241c52a 339 PIRSF PIRSF005211 1 337 5.6E-106 T 15-10-2018 IPR012020 AB hydrolase 4 family VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 SMART SM00448 1 113 3.8E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 Pfam PF00072 Response regulator receiver domain 3 108 9.6E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 Gene3D G3DSA:3.40.1550.10 135 319 3.9E-22 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 SUPERFAMILY SSF103039 137 318 1.83E-27 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 SUPERFAMILY SSF52172 1 108 3.84E-26 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1661 03973f3bfb499c22813dc354d89b247e 320 Gene3D G3DSA:3.40.50.2300 1 115 1.3E-25 T 15-10-2018 VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 SUPERFAMILY SSF56784 4 264 3.12E-66 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 232 9.8E-18 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 259 5.0E-51 T 15-10-2018 IPR000150 Cof family GO:0016787 VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 Gene3D G3DSA:3.40.50.1000 8 259 8.4E-75 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 259 5.5E-58 T 15-10-2018 VIBNI_B1222 ad45a77047b3901bc6777eb223d764d6 267 Gene3D G3DSA:3.30.1240.10 84 189 8.4E-75 T 15-10-2018 VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 SUPERFAMILY SSF53850 89 292 9.41E-36 T 15-10-2018 VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 Gene3D G3DSA:3.40.190.290 92 289 7.3E-44 T 15-10-2018 VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 SUPERFAMILY SSF46785 3 111 7.19E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 6.2E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 Pfam PF03466 LysR substrate binding domain 88 288 2.4E-32 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1696 70ed90a653518fef172c5d18541196e4 301 Gene3D G3DSA:1.10.10.10 3 90 6.2E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.2E-11 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 Pfam PF00455 DeoR C terminal sensor domain 376 533 8.4E-32 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 SUPERFAMILY SSF100950 375 534 5.72E-18 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 Gene3D G3DSA:3.40.50.2300 76 278 1.5E-24 T 15-10-2018 VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 SUPERFAMILY SSF53822 76 294 5.14E-22 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 Gene3D G3DSA:3.40.50.2300 121 257 1.5E-24 T 15-10-2018 VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 SMART SM00420 6 59 1.1E-9 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 SMART SM01134 372 535 9.6E-30 T 15-10-2018 VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 Pfam PF13407 Periplasmic binding protein domain 77 277 8.4E-12 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A2692 1bc184dcfe864aa5404b59f3a437fc74 575 SUPERFAMILY SSF46785 6 63 1.56E-6 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 SUPERFAMILY SSF103647 250 361 3.27E-6 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 Gene3D G3DSA:4.10.1080.10 221 368 2.5E-7 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 SUPERFAMILY SSF74853 360 483 1.44E-7 T 15-10-2018 IPR036415 Lamin tail domain superfamily VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 Gene3D G3DSA:3.40.390.10 676 804 9.5E-8 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 Pfam PF00932 Lamin Tail Domain 365 465 2.9E-8 T 15-10-2018 IPR001322 Lamin tail domain VIBNI_B1905 da8bb1883924830b60d704029465cd44 952 SUPERFAMILY SSF55486 681 777 3.42E-10 T 15-10-2018 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 SUPERFAMILY SSF46626 59 134 9.45E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 Gene3D G3DSA:1.10.760.10 58 136 4.6E-32 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 1.6E-14 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 1.6E-14 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 1.6E-14 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 1.6E-14 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VIBNI_A3493 482a2401b723e2b7e03bb2a9e341ed60 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 1.1E-16 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2309 ab600d74630d7b023d492827fbefdccc 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 301 7.3E-21 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VIBNI_A2309 ab600d74630d7b023d492827fbefdccc 425 SUPERFAMILY SSF51905 1 413 2.07E-53 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2309 ab600d74630d7b023d492827fbefdccc 425 Gene3D G3DSA:3.50.50.60 1 327 2.2E-27 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00448 915 1033 1.2E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF55874 705 875 7.86E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:3.40.50.2300 974 1047 7.0E-19 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00388 651 716 4.1E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF12860 PAS fold 523 635 5.5E-7 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 818 7.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 876 7.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 832 7.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 857 7.6E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00304 309 361 3.6E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:1.20.1480.50 273 368 5.5E-7 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:3.40.50.12330 906 973 4.5E-21 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:1.10.287.130 628 714 1.0E-25 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 763 878 5.7E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF47226 1016 1154 7.59E-16 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:3.30.450.20 510 627 2.6E-14 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF00672 HAMP domain 311 357 1.9E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF55785 386 502 1.36E-14 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF158472 311 357 1.31E-6 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00387 763 879 7.1E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 391 510 6.8E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF00512 His Kinase A (phospho-acceptor) domain 651 716 1.2E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF01627 Hpt domain 1085 1145 3.0E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:3.30.565.10 715 881 3.7E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF55785 501 629 1.05E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF00072 Response regulator receiver domain 917 1032 2.3E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00091 516 583 0.16 T 15-10-2018 IPR000014 PAS domain VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SMART SM00091 392 458 0.0023 T 15-10-2018 IPR000014 PAS domain VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF52172 913 1039 2.28E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:3.30.450.20 390 509 5.8E-19 T 15-10-2018 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Pfam PF08448 PAS fold 399 503 4.4E-13 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 Gene3D G3DSA:1.20.120.160 1063 1172 1.4E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2231 7a8cd6ac70eaeb6ce1e7fcd5abff0b6c 1172 SUPERFAMILY SSF47384 638 717 3.92E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 SMART SM00382 364 551 3.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 Pfam PF00664 ABC transporter transmembrane region 78 288 6.1E-7 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 SUPERFAMILY SSF52540 333 570 1.84E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 Gene3D G3DSA:1.20.1560.10 1 321 1.3E-26 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 532 3.3E-136 T 15-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 SUPERFAMILY SSF90123 7 323 1.31E-37 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 Gene3D G3DSA:3.40.50.300 332 572 6.4E-73 T 15-10-2018 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1135 725a0d8e32b48523443af469c17e7ee4 572 Pfam PF00005 ABC transporter 355 501 5.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 7.9E-68 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.838 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 SUPERFAMILY SSF51998 64 124 3.3E-23 T 15-10-2018 VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 Gene3D G3DSA:3.20.70.20 34 125 1.2E-24 T 15-10-2018 VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 Pfam PF01228 Glycine radical 16 106 5.6E-22 T 15-10-2018 IPR001150 Glycine radical domain GO:0003824 VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 PIRSF PIRSF000378 2 125 2.9E-52 T 15-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VIBNI_A0291 2fdb617d64c5091c482a187841dcf4aa 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 15-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 SUPERFAMILY SSF46785 3 113 4.84E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 Gene3D G3DSA:1.10.10.10 1 85 5.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.0E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 Pfam PF03466 LysR substrate binding domain 89 293 1.8E-44 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 Gene3D G3DSA:3.40.190.10 93 292 5.4E-47 T 15-10-2018 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 SUPERFAMILY SSF53850 89 294 4.27E-40 T 15-10-2018 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 Gene3D G3DSA:3.40.190.10 165 270 5.4E-47 T 15-10-2018 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0755 d4d044f6e38e841a788256ad5093db63 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.7E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 SUPERFAMILY SSF52540 6 233 2.45E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 Gene3D G3DSA:3.40.50.300 1 246 9.6E-56 T 15-10-2018 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 Gene3D G3DSA:3.40.50.300 247 495 3.9E-42 T 15-10-2018 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 Pfam PF00005 ABC transporter 272 426 9.0E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 SUPERFAMILY SSF52540 251 486 9.24E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 Pfam PF00005 ABC transporter 23 173 3.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 SMART SM00382 281 482 3.3E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0252 d1787f4db63ff98bd7037bdf10d70847 496 SMART SM00382 32 221 3.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 Gene3D G3DSA:2.30.30.240 95 176 3.7E-31 T 15-10-2018 VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 23.673 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 Gene3D G3DSA:2.40.30.60 1 94 2.3E-32 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 Pfam PF05239 PRC-barrel domain 97 171 3.4E-12 T 15-10-2018 IPR027275 PRC-barrel domain VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 SUPERFAMILY SSF50346 100 176 6.47E-20 T 15-10-2018 IPR011033 PRC-barrel-like superfamily VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 Pfam PF01782 RimM N-terminal domain 9 89 2.0E-24 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 SUPERFAMILY SSF50447 6 94 3.25E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A0166 aff409dbf5fcea0bf0c6deecb895d531 176 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 176 9.8E-58 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Gene3D G3DSA:3.30.54.20 131 188 3.6E-64 T 15-10-2018 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.3E-243 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Gene3D G3DSA:3.30.980.10 70 223 3.6E-64 T 15-10-2018 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 SUPERFAMILY SSF55186 65 242 1.7E-64 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 9.5E-50 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 3.1E-13 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Gene3D G3DSA:3.30.930.10 224 532 2.3E-129 T 15-10-2018 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 SUPERFAMILY SSF52954 530 637 3.47E-32 T 15-10-2018 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 SUPERFAMILY SSF81271 3 61 3.27E-15 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Pfam PF03129 Anticodon binding domain 542 631 8.4E-23 T 15-10-2018 IPR004154 Anticodon-binding VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Pfam PF02824 TGS domain 4 61 2.8E-11 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 SUPERFAMILY SSF55681 244 527 2.87E-99 T 15-10-2018 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 SMART SM00863 171 220 1.5E-18 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.302 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VIBNI_A2089 86d72e84e7ab2ef84bf502964ca8b3f9 642 Gene3D G3DSA:3.40.50.800 533 642 4.3E-32 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 Hamap MF_00813 Probable allantoicase [alc]. 3 329 46.269 T 15-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 SUPERFAMILY SSF49785 168 327 4.04E-56 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 Pfam PF03561 Allantoicase repeat 19 163 5.9E-46 T 15-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 Pfam PF03561 Allantoicase repeat 186 326 1.0E-47 T 15-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 PIRSF PIRSF016516 2 330 3.5E-147 T 15-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 Gene3D G3DSA:2.60.120.260 1 166 4.3E-58 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 Gene3D G3DSA:2.60.120.260 167 330 1.2E-56 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 TIGRFAM TIGR02961 allantoicase: allantoicase 10 326 9.0E-142 T 15-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 VIBNI_B1435 5f1c659a8dde49732a5e722d31359eb5 346 SUPERFAMILY SSF49785 7 165 3.83E-58 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.30.559.30 636 881 8.4E-32 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.30.559.30 183 442 7.9E-55 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.30.559.10 1 178 3.8E-35 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.30.559.10 452 623 2.2E-23 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 SUPERFAMILY SSF52777 638 867 6.78E-19 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 923 1322 1.5E-101 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 SUPERFAMILY SSF52777 4 177 5.56E-17 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1042 1053 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.30.300.30 1295 1417 8.7E-18 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 SUPERFAMILY SSF52777 459 643 4.22E-10 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 SUPERFAMILY SSF52777 185 439 9.45E-34 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Gene3D G3DSA:3.40.50.12780 895 1291 3.4E-91 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Pfam PF00501 AMP-binding enzyme 908 1299 1.9E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 SUPERFAMILY SSF56801 905 1393 3.14E-114 T 15-10-2018 VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Pfam PF00668 Condensation domain 4 430 4.6E-33 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0623 0a103f4f68c432f50e060166f5afc75d 1502 Pfam PF00668 Condensation domain 485 874 1.1E-14 T 15-10-2018 IPR001242 Condensation domain VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 15-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2867 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 15-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 PIRSF PIRSF029755 5 273 1.1E-117 T 15-10-2018 IPR016938 Uncharacterised protein family UPF0317 VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 SUPERFAMILY SSF160920 18 265 9.55E-108 T 15-10-2018 IPR038021 Putative hydro-lyase VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 Pfam PF07286 Protein of unknown function (DUF1445) 122 264 2.7E-64 T 15-10-2018 IPR009906 D-glutamate cyclase VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 Gene3D G3DSA:3.40.1640.10 31 260 5.9E-92 T 15-10-2018 VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 Hamap MF_01830 Putative hydro-lyase . 18 272 50.881 T 15-10-2018 IPR016938 Uncharacterised protein family UPF0317 VIBNI_B1848 b753b252e7407f98077917fa6c6df96d 273 Gene3D G3DSA:3.30.2040.10 132 244 5.9E-92 T 15-10-2018 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 Gene3D G3DSA:3.40.50.2300 164 331 1.9E-34 T 15-10-2018 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 SMART SM00354 3 70 1.3E-4 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 SUPERFAMILY SSF47413 2 46 7.31E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 46 1.7E-10 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 SUPERFAMILY SSF53822 92 310 5.42E-26 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 Gene3D G3DSA:1.10.260.40 1 46 2.8E-13 T 15-10-2018 VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 Pfam PF13407 Periplasmic binding protein domain 100 307 9.0E-25 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A2176 8ebcfd15c8e81e32de5ec426612f739f 335 Gene3D G3DSA:3.40.50.2300 85 325 1.9E-34 T 15-10-2018 VIBNI_A3655 5d7057064bd0a6a88a1c72b93bfd006c 319 Gene3D G3DSA:3.40.50.720 1 312 3.6E-58 T 15-10-2018 VIBNI_A3655 5d7057064bd0a6a88a1c72b93bfd006c 319 SUPERFAMILY SSF51735 2 311 4.06E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3655 5d7057064bd0a6a88a1c72b93bfd006c 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 221 2.3E-30 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_B1854 8201bbbfb5b3ff09bf0e9e4d438591a1 305 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 296 6.0E-76 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B1854 8201bbbfb5b3ff09bf0e9e4d438591a1 305 Gene3D G3DSA:2.40.100.10 177 305 7.9E-36 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1854 8201bbbfb5b3ff09bf0e9e4d438591a1 305 SMART SM00797 24 303 1.5E-108 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B1854 8201bbbfb5b3ff09bf0e9e4d438591a1 305 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 285 4.9E-79 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 5.2E-33 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 SUPERFAMILY SSF51735 143 307 1.29E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 2.5E-179 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 SMART SM00829 14 340 2.3E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 Gene3D G3DSA:3.90.180.10 22 330 1.0E-118 T 15-10-2018 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 Gene3D G3DSA:3.40.50.720 155 288 1.0E-118 T 15-10-2018 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 SUPERFAMILY SSF50129 3 175 3.96E-53 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.582 T 15-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VIBNI_B1268 391e1ed2d7dc899f0df530af8a82525b 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 8.2E-28 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A1006 e053af15234991534b4169d46f6b4508 304 Pfam PF01040 UbiA prenyltransferase family 19 266 3.7E-55 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VIBNI_A1006 e053af15234991534b4169d46f6b4508 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 281 3.7E-81 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VIBNI_A1006 e053af15234991534b4169d46f6b4508 304 Gene3D G3DSA:1.10.357.140 16 167 9.5E-20 T 15-10-2018 VIBNI_A1006 e053af15234991534b4169d46f6b4508 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site VIBNI_A1006 e053af15234991534b4169d46f6b4508 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 16.291 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 SUPERFAMILY SSF56784 4 209 5.07E-47 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 2.1E-32 T 15-10-2018 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 Gene3D G3DSA:1.10.150.240 17 86 1.6E-44 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 183 2.1E-18 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0358 2dcc510465ff5896bc90ccdc106cb601 209 Gene3D G3DSA:3.40.50.1000 6 204 1.6E-44 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 328 9.5E-164 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 Gene3D G3DSA:3.20.20.70 12 253 1.1E-73 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 PIRSF PIRSF006621 5 330 4.9E-77 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 330 53.717 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 Gene3D G3DSA:1.20.120.1460 257 333 1.1E-23 T 15-10-2018 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 SUPERFAMILY SSF51395 14 326 1.67E-76 T 15-10-2018 VIBNI_A3511 16269dee35c3fe567c99432310e502e5 334 Pfam PF01207 Dihydrouridine synthase (Dus) 17 323 1.0E-97 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A2404 bae6f78d1f20b38e302aa0ee1d12b058 186 Pfam PF04011 LemA family 5 180 5.2E-63 T 15-10-2018 IPR007156 LemA VIBNI_A2404 bae6f78d1f20b38e302aa0ee1d12b058 186 SUPERFAMILY SSF140478 23 172 1.44E-47 T 15-10-2018 IPR023353 LemA-like domain superfamily VIBNI_A2404 bae6f78d1f20b38e302aa0ee1d12b058 186 Gene3D G3DSA:1.20.1440.20 14 181 1.1E-55 T 15-10-2018 IPR023353 LemA-like domain superfamily VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 Gene3D G3DSA:3.65.10.10 10 416 9.0E-152 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 409 1.3E-93 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 39.84 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 SUPERFAMILY SSF55205 1 420 1.11E-124 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 1.1E-161 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3663 8fd48f7d44493c01780b743020b7fd1d 421 Gene3D G3DSA:3.65.10.10 21 233 9.0E-152 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_B1174 486130aac3366ac9b1de20b47cdca08c 404 SUPERFAMILY SSF51695 63 398 1.83E-65 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B1174 486130aac3366ac9b1de20b47cdca08c 404 Gene3D G3DSA:3.20.20.190 59 399 2.1E-42 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B1174 486130aac3366ac9b1de20b47cdca08c 404 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 65 391 5.4E-23 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 Pfam PF00583 Acetyltransferase (GNAT) family 32 134 4.8E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 169 308 9.3E-51 T 15-10-2018 IPR012660 Thioesterase, putative VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 SUPERFAMILY SSF54637 166 308 2.04E-37 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 176 309 1.4E-44 T 15-10-2018 IPR012660 Thioesterase, putative VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 Gene3D G3DSA:3.10.129.10 160 310 1.0E-44 T 15-10-2018 VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 SUPERFAMILY SSF55729 14 169 1.08E-30 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3385 41159973d59221dfcd40815c0a0e6e9b 317 Gene3D G3DSA:3.40.630.30 13 157 3.7E-30 T 15-10-2018 VIBNI_A2913 ab427c0ed056e73b012f2ff771affedc 178 SUPERFAMILY SSF48452 2 174 4.55E-68 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2913 ab427c0ed056e73b012f2ff771affedc 178 Gene3D G3DSA:1.20.58.320 1 77 5.8E-26 T 15-10-2018 VIBNI_A2913 ab427c0ed056e73b012f2ff771affedc 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 2.0E-63 T 15-10-2018 IPR010323 Protein of unknown function DUF924 VIBNI_A2913 ab427c0ed056e73b012f2ff771affedc 178 Gene3D G3DSA:1.25.40.10 78 178 5.7E-35 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 Pfam PF00691 OmpA family 227 322 7.8E-25 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 PRINTS PR01022 Outer membrane protein A signature 103 119 2.5E-6 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 PRINTS PR01022 Outer membrane protein A signature 282 301 2.5E-6 T 15-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 ProSitePatterns PS01068 OmpA-like domain. 260 304 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 SUPERFAMILY SSF56925 19 179 2.51E-26 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 Pfam PF01389 OmpA-like transmembrane domain 20 179 2.0E-28 T 15-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 SUPERFAMILY SSF103088 214 328 1.96E-37 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 PRINTS PR01021 OMPA domain signature 258 273 3.1E-12 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 PRINTS PR01021 OMPA domain signature 228 250 3.1E-12 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 PRINTS PR01021 OMPA domain signature 273 289 3.1E-12 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 Gene3D G3DSA:2.40.160.20 11 203 1.3E-40 T 15-10-2018 VIBNI_B1156 fd64ad8eb261ac6f29abd031bfda5e44 335 Gene3D G3DSA:3.30.1330.60 204 333 9.2E-44 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 2.5E-37 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 Gene3D G3DSA:3.40.190.10 119 210 7.9E-63 T 15-10-2018 VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 SMART SM00062 32 256 3.3E-36 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 Gene3D G3DSA:3.40.190.10 24 243 7.9E-63 T 15-10-2018 VIBNI_A3857 eca4bfd55c62cb5b471039613db5b92d 257 SUPERFAMILY SSF53850 1 255 7.25E-52 T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 Gene3D G3DSA:1.10.260.40 1 49 1.6E-19 T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 6.0E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 Gene3D G3DSA:3.40.50.2300 63 308 1.2E-64 T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 Gene3D G3DSA:3.40.50.2300 163 292 1.2E-64 T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 SUPERFAMILY SSF47413 1 53 5.12E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 Pfam PF13377 Periplasmic binding protein-like domain 172 332 9.6E-37 T 15-10-2018 VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 SUPERFAMILY SSF53822 62 334 1.55E-64 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1690 02a017187e62e29abcf6bb50dea6a59d 336 SMART SM00354 3 72 1.9E-11 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A0696 6e87d6b50a3464395ca418b765791d78 115 SUPERFAMILY SSF52833 4 114 1.77E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0696 6e87d6b50a3464395ca418b765791d78 115 Gene3D G3DSA:3.40.30.10 2 114 1.1E-43 T 15-10-2018 VIBNI_A0696 6e87d6b50a3464395ca418b765791d78 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 113 4.2E-33 T 15-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VIBNI_A0696 6e87d6b50a3464395ca418b765791d78 115 Pfam PF03960 ArsC family 6 113 4.3E-20 T 15-10-2018 IPR006660 Arsenate reductase-like VIBNI_A1871 62cb7635b16b46cd4674d474e7600bb2 249 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 28.965 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1871 62cb7635b16b46cd4674d474e7600bb2 249 SUPERFAMILY SSF110395 3 247 5.75E-68 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1871 62cb7635b16b46cd4674d474e7600bb2 249 Gene3D G3DSA:3.20.20.380 3 249 2.7E-82 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1871 62cb7635b16b46cd4674d474e7600bb2 249 Pfam PF03932 CutC family 3 205 2.1E-79 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 SUPERFAMILY SSF51735 100 287 1.19E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 Gene3D G3DSA:3.40.50.720 24 314 6.6E-110 T 15-10-2018 VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 Gene3D G3DSA:3.40.50.720 96 285 6.6E-110 T 15-10-2018 VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 SUPERFAMILY SSF52283 1 136 1.36E-31 T 15-10-2018 VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 2.7E-55 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A2935 cbf175e6b520f39771c6cf8c60c14733 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 317 1.4E-24 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A1454 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1454 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A1454 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1454 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A0401 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A0401 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A0401 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A0401 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A1815 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1815 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A1815 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1815 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A0299 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A0299 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A0299 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A0299 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A2343 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2343 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A2343 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2343 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A1340 7ab0451446752fa86477652f80e9ae52 266 Gene3D G3DSA:3.30.420.10 100 257 2.6E-12 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1340 7ab0451446752fa86477652f80e9ae52 266 Pfam PF00665 Integrase core domain 103 217 8.5E-27 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A1340 7ab0451446752fa86477652f80e9ae52 266 SUPERFAMILY SSF53098 99 257 1.47E-32 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1340 7ab0451446752fa86477652f80e9ae52 266 Pfam PF13276 HTH-like domain 27 80 2.8E-18 T 15-10-2018 IPR025948 HTH-like domain VIBNI_A0448 95ff5f53d31808286dd6966593f742c4 150 Pfam PF00583 Acetyltransferase (GNAT) family 24 121 1.0E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0448 95ff5f53d31808286dd6966593f742c4 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 3.4E-35 T 15-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VIBNI_A0448 95ff5f53d31808286dd6966593f742c4 150 Gene3D G3DSA:3.40.630.30 2 147 1.9E-39 T 15-10-2018 VIBNI_A0448 95ff5f53d31808286dd6966593f742c4 150 SUPERFAMILY SSF55729 1 145 5.0E-30 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 Gene3D G3DSA:2.40.30.10 288 370 5.5E-33 T 15-10-2018 VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 Gene3D G3DSA:2.30.30.280 217 286 6.9E-26 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 366 2.1E-150 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 SUPERFAMILY SSF52402 5 248 5.73E-56 T 15-10-2018 VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 Gene3D G3DSA:3.40.50.620 1 216 1.1E-93 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 Pfam PF03054 tRNA methyl transferase 7 366 1.3E-140 T 15-10-2018 VIBNI_A2135 38c33b7c15d365a48c6a613bfe7dfc77 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 367 39.464 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF00975 Thioesterase domain 1150 1385 2.0E-21 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF56801 493 1066 2.09E-144 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:3.30.300.30 940 1043 1.1E-30 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:3.30.559.10 76 444 6.4E-122 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 ProSitePatterns PS00455 Putative AMP-binding domain signature. 689 700 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF52777 76 246 3.89E-38 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF53474 1132 1386 6.31E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF00668 Condensation domain 76 515 2.0E-93 T 15-10-2018 IPR001242 Condensation domain VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF52777 252 521 1.22E-54 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:1.20.1250.20 1432 1833 1.0E-32 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:1.10.1200.10 1044 1135 2.9E-20 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF00550 Phosphopantetheine attachment site 1055 1126 6.5E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:3.40.50.1820 1139 1390 9.8E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF103473 1430 1844 1.44E-45 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF07690 Major Facilitator Superfamily 1439 1777 8.1E-22 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF00501 AMP-binding enzyme 534 946 5.3E-91 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SMART SM00823 Phosphopantetheine attachment site 1053 1130 0.0015 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:3.40.50.12780 526 938 2.1E-105 T 15-10-2018 VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 SUPERFAMILY SSF47336 1045 1127 1.02E-14 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Pfam PF13193 AMP-binding enzyme C-terminal domain 954 1028 4.8E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 555 970 1.6E-111 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1077 1092 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A3716 c3412dc2e188bcbf3341a9115cbe8d39 1875 Gene3D G3DSA:3.30.559.30 250 499 6.4E-122 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.2090.10 186 277 3.6E-214 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.70.1440 687 922 3.6E-214 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82693 45 139 5.93E-20 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.2090.10 735 840 3.6E-214 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82714 190 272 1.44E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.70.1430 45 848 3.6E-214 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 344 367 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Pfam PF00873 AcrB/AcrD/AcrF family 923 1085 1.3E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Pfam PF00873 AcrB/AcrD/AcrF family 22 871 5.7E-130 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82714 736 807 2.22E-6 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82693 569 683 9.68E-8 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82866 840 1088 5.75E-35 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82693 148 336 7.85E-8 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:1.20.1640.10 517 1084 3.6E-214 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 SUPERFAMILY SSF82866 303 503 5.1E-38 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.70.1320 139 338 3.6E-214 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:3.30.70.1430 573 686 3.6E-214 T 15-10-2018 VIBNI_B1121 f164c6e1f20c70e7aa1c5f6a46d684ce 1103 Gene3D G3DSA:1.20.1640.10 21 516 3.6E-214 T 15-10-2018 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 SUPERFAMILY SSF141130 9 314 5.23E-89 T 15-10-2018 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 Pfam PF03069 Acetamidase/Formamidase family 13 151 1.8E-22 T 15-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 Pfam PF03069 Acetamidase/Formamidase family 156 315 5.1E-37 T 15-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 Gene3D G3DSA:3.10.28.20 241 314 7.7E-12 T 15-10-2018 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 Gene3D G3DSA:2.60.120.580 128 223 7.8E-33 T 15-10-2018 VIBNI_B1661 bad2f6dd65b378e431f569bbf3923f62 315 Gene3D G3DSA:2.60.120.580 3 115 1.3E-23 T 15-10-2018 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Pfam PF02743 Cache domain 31 218 2.8E-14 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 SMART SM00388 372 440 1.8E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 PIRSF PIRSF036431 1 590 9.7E-182 T 15-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Gene3D G3DSA:3.30.565.10 440 590 3.2E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Gene3D G3DSA:1.10.287.130 349 435 3.0E-20 T 15-10-2018 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 SUPERFAMILY SSF103190 47 186 2.35E-25 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 3.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 3.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 3.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 550 3.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 588 9.9E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Gene3D G3DSA:3.30.450.20 53 174 7.9E-81 T 15-10-2018 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 437 3.0E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 SUPERFAMILY SSF55874 441 589 6.02E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 Gene3D G3DSA:3.30.450.20 41 279 7.9E-81 T 15-10-2018 VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 SMART SM00387 483 590 7.7E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2430 eb79f27fa39df2a7c0a4d85da3954fed 590 SUPERFAMILY SSF47384 360 437 4.12E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0196 37d4f90bbe971d8c1717907d13053522 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 430 5.5E-108 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VIBNI_A0196 37d4f90bbe971d8c1717907d13053522 434 SUPERFAMILY SSF56954 1 422 3.4E-90 T 15-10-2018 VIBNI_A0196 37d4f90bbe971d8c1717907d13053522 434 Pfam PF02321 Outer membrane efflux protein 23 205 1.6E-24 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A0196 37d4f90bbe971d8c1717907d13053522 434 Pfam PF02321 Outer membrane efflux protein 230 416 2.6E-33 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A0196 37d4f90bbe971d8c1717907d13053522 434 Gene3D G3DSA:1.20.1600.10 21 434 2.7E-119 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Pfam PF10415 Fumarase C C-terminus 402 454 1.1E-19 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Gene3D G3DSA:1.10.40.30 400 457 2.0E-18 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Gene3D G3DSA:1.20.200.10 133 399 1.8E-94 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Gene3D G3DSA:1.10.275.10 5 132 3.3E-53 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 74.938 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.5E-30 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.5E-30 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.5E-30 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.5E-30 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 Pfam PF00206 Lyase 12 336 2.5E-94 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 5.4E-6 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 5.4E-6 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 5.4E-6 T 15-10-2018 VIBNI_B0982 973b5ea0b52bb70acc25ea0567f12a5e 460 SUPERFAMILY SSF48557 4 454 9.28E-137 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 VIBNI_B1260 0e310b3d69505f3ab2667d8a323e69ed 131 SUPERFAMILY SSF51316 11 130 9.63E-33 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B1260 0e310b3d69505f3ab2667d8a323e69ed 131 Gene3D G3DSA:2.170.150.70 14 131 9.5E-38 T 15-10-2018 VIBNI_B1260 0e310b3d69505f3ab2667d8a323e69ed 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 4.8E-10 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 3.9E-135 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 Pfam PF01235 Sodium:alanine symporter family 51 472 5.7E-149 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 304 322 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 189 207 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 86 108 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 365 387 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 217 236 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 PRINTS PR00175 Sodium/alanine symporter signature 428 448 7.3E-56 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A2765 9dd302a5390d5b23bcbe7d1743c15c19 514 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:1.20.120.160 662 785 2.9E-25 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 508 3.0E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:3.30.565.10 348 512 6.9E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SUPERFAMILY SSF55785 140 267 5.23E-24 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Pfam PF00989 PAS fold 157 266 5.3E-17 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:3.30.450.20 151 267 1.4E-21 T 15-10-2018 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SMART SM00073 682 779 3.5E-6 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 3.7E-18 T 15-10-2018 IPR000014 PAS domain VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:1.10.287.130 268 345 3.6E-22 T 15-10-2018 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SMART SM00388 282 347 1.1E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SMART SM00091 155 221 5.8E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SMART SM00387 394 510 2.2E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:1.10.287.970 1 89 1.1E-37 T 15-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Gene3D G3DSA:3.40.50.2300 513 641 4.4E-29 T 15-10-2018 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SMART SM00448 528 639 5.1E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SUPERFAMILY SSF47384 270 347 6.47E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SUPERFAMILY SSF47226 670 781 7.2E-26 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 2.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 2.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 2.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 2.7E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Pfam PF00072 Response regulator receiver domain 530 639 9.1E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SUPERFAMILY SSF52172 527 640 1.11E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 SUPERFAMILY SSF55874 336 508 5.24E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 PIRSF PIRSF003182 1 785 0.0 T 15-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.7E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0282 9af4f1df64691fe0fbe0f91a8855dc62 787 Pfam PF01627 Hpt domain 694 764 2.1E-9 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.8E-98 T 15-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Gene3D G3DSA:3.30.499.10 402 529 1.1E-147 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Gene3D G3DSA:3.30.499.10 683 865 4.3E-72 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.2E-65 T 15-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Gene3D G3DSA:1.25.40.310 1 161 6.3E-70 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 SUPERFAMILY SSF52016 162 372 3.34E-70 T 15-10-2018 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 PIRSF PIRSF036687 1 859 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 SUPERFAMILY SSF74778 2 160 3.92E-66 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 3.2E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Gene3D G3DSA:3.20.19.10 162 361 1.9E-80 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 Gene3D G3DSA:3.40.1060.10 385 681 1.1E-147 T 15-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 SUPERFAMILY SSF53732 379 860 1.7E-146 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VIBNI_A2842 66c076a7a6b03c03ec93bafde956380b 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 Gene3D G3DSA:3.20.20.450 146 199 7.7E-8 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 Gene3D G3DSA:3.20.20.450 2 120 9.1E-6 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 Pfam PF08668 HDOD domain 205 319 3.3E-15 T 15-10-2018 IPR013976 Metal-dependent hydrolase HDOD VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 Gene3D G3DSA:1.10.3210.10 200 363 3.4E-21 T 15-10-2018 VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 PIRSF PIRSF003180 1 403 5.7E-158 T 15-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 SMART SM00052 2 195 0.0053 T 15-10-2018 IPR001633 EAL domain VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 Pfam PF00563 EAL domain 73 190 2.6E-12 T 15-10-2018 IPR001633 EAL domain VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 SUPERFAMILY SSF141868 5 193 3.01E-27 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2283 c756fe08a2d7ae42660aa5d27d363f8e 403 SUPERFAMILY SSF109604 181 400 1.26E-42 T 15-10-2018 VIBNI_A2804 91d97515b85a4c0073a972f12932a2f1 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 4.3E-57 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VIBNI_A2804 91d97515b85a4c0073a972f12932a2f1 209 Gene3D G3DSA:3.40.50.150 30 209 2.4E-61 T 15-10-2018 VIBNI_A2804 91d97515b85a4c0073a972f12932a2f1 209 SUPERFAMILY SSF53335 30 209 8.2E-46 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2804 91d97515b85a4c0073a972f12932a2f1 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.926 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VIBNI_A2804 91d97515b85a4c0073a972f12932a2f1 209 PIRSF PIRSF005461 1 209 2.6E-82 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VIBNI_A1699 70486c92ac227ff0210279eeeb815ce4 211 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 34 194 2.4E-21 T 15-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain VIBNI_A1699 70486c92ac227ff0210279eeeb815ce4 211 Gene3D G3DSA:2.160.20.120 94 209 1.7E-24 T 15-10-2018 VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 68 2.3E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 Gene3D G3DSA:1.20.120.530 79 214 2.0E-20 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 SMART SM00895 83 209 4.8E-13 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 SUPERFAMILY SSF48008 84 211 4.18E-20 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 Gene3D G3DSA:1.10.10.10 7 74 3.3E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 SUPERFAMILY SSF46785 8 77 1.42E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 Pfam PF07729 FCD domain 85 208 2.0E-18 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0758 0e43cb4a3d4418eebcb8122f1c67abf5 227 SMART SM00345 15 73 2.5E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0685 db8a2741a6429b3003143737feecc301 189 Pfam PF03358 NADPH-dependent FMN reductase 5 132 1.0E-10 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VIBNI_A0685 db8a2741a6429b3003143737feecc301 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VIBNI_A0685 db8a2741a6429b3003143737feecc301 189 Gene3D G3DSA:3.40.50.360 1 189 3.0E-58 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0685 db8a2741a6429b3003143737feecc301 189 SUPERFAMILY SSF52218 3 188 8.87E-54 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3454 d7af547f99f3e5af6e882b88958b3c29 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.803 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VIBNI_A3454 d7af547f99f3e5af6e882b88958b3c29 259 Gene3D G3DSA:3.40.50.150 57 259 3.7E-73 T 15-10-2018 VIBNI_A3454 d7af547f99f3e5af6e882b88958b3c29 259 Gene3D G3DSA:3.40.1630.10 1 56 1.5E-17 T 15-10-2018 VIBNI_A3454 d7af547f99f3e5af6e882b88958b3c29 259 SUPERFAMILY SSF53335 6 255 1.32E-73 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3454 d7af547f99f3e5af6e882b88958b3c29 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 4.1E-105 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 Gene3D G3DSA:1.20.1050.10 89 193 6.5E-78 T 15-10-2018 VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 SUPERFAMILY SSF52833 11 111 3.19E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 Gene3D G3DSA:3.40.30.10 11 202 6.5E-78 T 15-10-2018 VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 SUPERFAMILY SSF47616 82 208 1.38E-24 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 3.5E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal VIBNI_A0212 5142897d51f5703f92e99dde2be1ef95 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 4.3E-16 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_A1866 fc4acc084dc9b637a141b7040d8dac72 210 PIRSF PIRSF006324 1 210 1.3E-55 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1866 fc4acc084dc9b637a141b7040d8dac72 210 Pfam PF01810 LysE type translocator 15 208 3.6E-30 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3691 ec5a89400a5a9e7a0427dd3f0e8de6b2 350 Gene3D G3DSA:3.40.50.2000 6 156 7.0E-24 T 15-10-2018 VIBNI_A3691 ec5a89400a5a9e7a0427dd3f0e8de6b2 350 SUPERFAMILY SSF53756 10 346 1.1E-80 T 15-10-2018 VIBNI_A3691 ec5a89400a5a9e7a0427dd3f0e8de6b2 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 304 2.7E-48 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VIBNI_A3691 ec5a89400a5a9e7a0427dd3f0e8de6b2 350 Gene3D G3DSA:3.40.50.2000 161 349 9.3E-38 T 15-10-2018 VIBNI_B1462 860788ee2a2726cc50e14a8796e95a74 179 Gene3D G3DSA:3.40.630.30 16 178 2.1E-19 T 15-10-2018 VIBNI_B1462 860788ee2a2726cc50e14a8796e95a74 179 Pfam PF00583 Acetyltransferase (GNAT) family 38 153 3.3E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1462 860788ee2a2726cc50e14a8796e95a74 179 SUPERFAMILY SSF55729 43 178 4.18E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 SMART SM01004 9 333 1.3E-245 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.2E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 SUPERFAMILY SSF51569 7 335 9.52E-146 T 15-10-2018 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 Gene3D G3DSA:3.20.20.70 2 337 3.7E-149 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.2E-142 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 15-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A3407 442bfe74fdbd2735757d1147e173ff85 348 PIRSF PIRSF001415 2 336 2.1E-152 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 Pfam PF02401 LytB protein 3 282 1.8E-91 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.4E-96 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 Gene3D G3DSA:3.40.1010.20 97 196 1.7E-108 T 15-10-2018 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.344 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 Gene3D G3DSA:3.40.50.11270 12 96 1.7E-108 T 15-10-2018 VIBNI_A0363 75887c6bc0f10a616317609e2f5df720 313 Gene3D G3DSA:3.40.1010.20 6 281 1.7E-108 T 15-10-2018 VIBNI_B1501 71420f10ccb3540272e93eba09629d82 143 PIRSF PIRSF033736 4 143 6.6E-31 T 15-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 VIBNI_B1501 71420f10ccb3540272e93eba09629d82 143 SUPERFAMILY SSF102462 9 143 1.03E-37 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 VIBNI_B1501 71420f10ccb3540272e93eba09629d82 143 Pfam PF09391 Protein of unknown function (DUF2000) 10 143 2.6E-42 T 15-10-2018 IPR018988 Protein of unknown function DUF2000 VIBNI_B1501 71420f10ccb3540272e93eba09629d82 143 Gene3D G3DSA:3.40.1490.10 8 143 5.8E-18 T 15-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 SMART SM00670 7 140 1.6E-7 T 15-10-2018 IPR002716 PIN domain VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 SUPERFAMILY SSF88723 7 154 1.63E-13 T 15-10-2018 IPR029060 PIN-like domain superfamily VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 Gene3D G3DSA:3.40.50.1010 3 154 1.1E-26 T 15-10-2018 VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 SUPERFAMILY SSF52540 155 436 6.42E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 Pfam PF13638 PIN domain 9 149 1.5E-33 T 15-10-2018 IPR002716 PIN domain VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 Pfam PF02562 PhoH-like protein 247 451 3.7E-54 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 VIBNI_A2938 555e37916cf2e329b42d1e56ede86e4a 457 Gene3D G3DSA:3.40.50.300 244 455 1.2E-65 T 15-10-2018 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 69 74 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 Gene3D G3DSA:2.40.10.10 25 260 5.8E-59 T 15-10-2018 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 59 74 3.1E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 116 130 3.1E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 207 219 3.1E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 SUPERFAMILY SSF51055 279 329 7.06E-8 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 Gene3D G3DSA:2.10.10.20 276 330 5.6E-7 T 15-10-2018 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 SUPERFAMILY SSF50494 11 258 1.1E-66 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 Pfam PF00089 Trypsin 33 255 1.0E-53 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 208 219 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0363 eebc137941455ab4a489f653071be57b 330 SMART SM00020 32 255 7.3E-61 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 442 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SMART SM00304 173 226 4.1E-12 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 288 2.1E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Gene3D G3DSA:1.10.287.130 177 286 6.6E-26 T 15-10-2018 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SUPERFAMILY SSF47384 211 289 3.34E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SUPERFAMILY SSF55874 279 443 2.88E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 443 1.6E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SMART SM00387 333 445 7.4E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Gene3D G3DSA:3.30.450.170 26 145 5.4E-27 T 15-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 1.6E-32 T 15-10-2018 IPR031930 2-component histidine kinase, sensor domain VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SUPERFAMILY SSF158472 173 223 5.23E-9 T 15-10-2018 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 SMART SM00388 227 289 3.2E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Gene3D G3DSA:3.30.565.10 287 443 4.8E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0886 54b46a2121a0778b232cdae3a4d58873 445 Pfam PF00672 HAMP domain 173 220 1.4E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0202 d20ccf69a835c3a409c40edcd168f0be 479 Pfam PF03573 outer membrane porin, OprD family 57 477 2.2E-12 T 15-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 VIBNI_B0202 d20ccf69a835c3a409c40edcd168f0be 479 Gene3D G3DSA:2.40.160.10 60 479 2.3E-25 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 Pfam PF00293 NUDIX domain 33 106 4.7E-12 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 SUPERFAMILY SSF55811 30 164 1.11E-19 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 Gene3D G3DSA:3.90.79.10 18 188 9.3E-18 T 15-10-2018 VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 Gene3D G3DSA:1.20.144.10 268 368 1.1E-8 T 15-10-2018 VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 SUPERFAMILY SSF48317 190 358 6.15E-13 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A1827 604cd503c3d4b5726008dce70222b842 485 Pfam PF01569 PAP2 superfamily 244 360 7.0E-10 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 SUPERFAMILY SSF55729 315 458 4.03E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 Pfam PF01553 Acyltransferase 65 163 7.5E-6 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 Pfam PF13444 Acetyltransferase (GNAT) domain 332 436 7.6E-21 T 15-10-2018 VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 SUPERFAMILY SSF69593 57 256 1.1E-11 T 15-10-2018 VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 Gene3D G3DSA:3.40.630.30 318 463 1.0E-7 T 15-10-2018 VIBNI_A2876 774435ef8eae68455a452dd534bd8379 590 SMART SM00563 75 200 8.8E-5 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 552 4.7E-20 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Gene3D G3DSA:3.40.50.970 370 578 4.0E-40 T 15-10-2018 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Gene3D G3DSA:3.40.50.970 2 192 4.0E-49 T 15-10-2018 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 SUPERFAMILY SSF52518 1 188 6.42E-29 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 PIRSF PIRSF036565 1 586 1.5E-112 T 15-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 338 1.9E-13 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 SUPERFAMILY SSF52467 176 363 1.37E-20 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 SUPERFAMILY SSF52518 377 568 8.76E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Gene3D G3DSA:3.40.50.1220 195 366 1.8E-27 T 15-10-2018 VIBNI_B0089 7bf76f873cc3ce7508d1c6691cfecacd 602 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 186 2.8E-29 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_B0425 c482608b1d40c9b1605a0e6108350897 112 SUPERFAMILY SSF51316 4 94 8.16E-18 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B0425 c482608b1d40c9b1605a0e6108350897 112 Gene3D G3DSA:2.170.150.70 1 111 5.9E-20 T 15-10-2018 VIBNI_B1103 6c9b52748ff4ed65e6ab42b90ae6a7af 203 Pfam PF00226 DnaJ domain 158 203 5.9E-10 T 15-10-2018 IPR001623 DnaJ domain VIBNI_B1103 6c9b52748ff4ed65e6ab42b90ae6a7af 203 Pfam PF12339 DNA-J related protein 16 137 3.1E-41 T 15-10-2018 IPR021059 DnaJ-related protein, N-terminal VIBNI_B1103 6c9b52748ff4ed65e6ab42b90ae6a7af 203 SMART SM00271 151 203 7.4E-9 T 15-10-2018 IPR001623 DnaJ domain VIBNI_B1103 6c9b52748ff4ed65e6ab42b90ae6a7af 203 Gene3D G3DSA:1.10.287.110 147 203 2.9E-12 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_B1103 6c9b52748ff4ed65e6ab42b90ae6a7af 203 SUPERFAMILY SSF46565 108 203 1.18E-13 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A3471 0e560288482c041505fd7327748c3d07 427 SUPERFAMILY SSF56176 29 172 1.78E-29 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A3471 0e560288482c041505fd7327748c3d07 427 Gene3D G3DSA:3.30.465.10 60 184 2.9E-21 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VIBNI_A3471 0e560288482c041505fd7327748c3d07 427 Pfam PF01565 FAD binding domain 30 142 3.2E-16 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VIBNI_A2223 a790e7e8d6adf412bfb87fec44098e6b 147 Pfam PF03724 META domain 33 141 2.0E-24 T 15-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VIBNI_A2223 a790e7e8d6adf412bfb87fec44098e6b 147 Gene3D G3DSA:2.40.128.270 39 142 1.2E-28 T 15-10-2018 IPR038670 HslJ-like superfamily VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.139 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 SUPERFAMILY SSF57825 101 152 3.01E-15 T 15-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 Gene3D G3DSA:3.30.70.140 1 100 9.2E-36 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 5.2E-59 T 15-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.5E-29 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 8.5E-19 T 15-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 Gene3D G3DSA:2.30.30.20 101 152 3.7E-23 T 15-10-2018 VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 3.0E-41 T 15-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VIBNI_A3126 5a0e1c8c79e55989d61c54fc64e7f878 153 SUPERFAMILY SSF54893 2 100 1.57E-34 T 15-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VIBNI_B0337 dda16352a0289f9aa155d86476d82970 173 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 3.7E-56 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_B0337 dda16352a0289f9aa155d86476d82970 173 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 3.4E-56 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_B0337 dda16352a0289f9aa155d86476d82970 173 PIRSF PIRSF028301 1 171 6.4E-61 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 SUPERFAMILY SSF140990 402 596 3.4E-74 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Gene3D G3DSA:1.10.8.60 323 399 2.1E-27 T 15-10-2018 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Pfam PF06480 FtsH Extracellular 5 92 5.7E-13 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.1E-46 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 SUPERFAMILY SSF52540 143 391 9.3E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.205 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Pfam PF01434 Peptidase family M41 382 591 2.2E-80 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Gene3D G3DSA:2.40.50.920 24 99 3.1E-31 T 15-10-2018 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Gene3D G3DSA:1.20.58.760 402 605 1.9E-71 T 15-10-2018 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 Gene3D G3DSA:3.40.50.300 136 322 2.9E-70 T 15-10-2018 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 593 5.1E-242 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VIBNI_A2803 4878abd9ee93c4e4af91b7b391d92d97 647 SMART SM00382 184 323 5.1E-26 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2387 140405adbe727d20dfba7f34588ebb50 357 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.376 T 15-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VIBNI_A2387 140405adbe727d20dfba7f34588ebb50 357 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 4.0E-99 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VIBNI_A2387 140405adbe727d20dfba7f34588ebb50 357 Gene3D G3DSA:3.40.50.300 79 336 1.3E-85 T 15-10-2018 VIBNI_A2387 140405adbe727d20dfba7f34588ebb50 357 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 15-10-2018 IPR000808 Mrp, conserved site GO:0005524 VIBNI_A2387 140405adbe727d20dfba7f34588ebb50 357 SUPERFAMILY SSF52540 96 343 6.07E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2037 bd36e9ea21e3542292f5a461bba29845 360 Pfam PF07433 Protein of unknown function (DUF1513) 65 358 2.4E-105 T 15-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VIBNI_A2037 bd36e9ea21e3542292f5a461bba29845 360 SUPERFAMILY SSF50969 58 319 5.89E-15 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VIBNI_A2037 bd36e9ea21e3542292f5a461bba29845 360 Gene3D G3DSA:2.130.10.10 47 235 4.1E-5 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A2037 bd36e9ea21e3542292f5a461bba29845 360 PIRSF PIRSF028101 1 360 5.2E-143 T 15-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VIBNI_B1875 37c4b03b05a1c63226259430442433d5 235 Gene3D G3DSA:3.20.20.370 20 235 1.1E-55 T 15-10-2018 VIBNI_B1875 37c4b03b05a1c63226259430442433d5 235 SUPERFAMILY SSF88713 33 232 4.2E-50 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_B1875 37c4b03b05a1c63226259430442433d5 235 Pfam PF01522 Polysaccharide deacetylase 39 159 9.8E-29 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VIBNI_B0373 b0403010cf57cf852e661c0140f478d4 147 Pfam PF12802 MarR family 33 91 3.4E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0373 b0403010cf57cf852e661c0140f478d4 147 SMART SM00347 27 127 1.1E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0373 b0403010cf57cf852e661c0140f478d4 147 SUPERFAMILY SSF46785 8 142 5.46E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0373 b0403010cf57cf852e661c0140f478d4 147 Gene3D G3DSA:1.10.10.10 1 144 6.9E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 265 1.0E-62 T 15-10-2018 VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 Gene3D G3DSA:3.40.50.720 4 267 1.6E-75 T 15-10-2018 VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 160 188 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 SUPERFAMILY SSF51735 20 266 8.55E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 1.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 1.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 1.3E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0675 57a8fe07ecd1bd14253cce8c8892259d 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 1.4E-32 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 Gene3D G3DSA:3.40.50.300 242 474 7.5E-40 T 15-10-2018 VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 SMART SM00382 279 455 2.0E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 Pfam PF00005 ABC transporter 271 422 2.8E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 SUPERFAMILY SSF52540 239 465 4.06E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 Gene3D G3DSA:3.40.50.300 13 241 1.1E-26 T 15-10-2018 VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 Pfam PF00005 ABC transporter 50 159 2.7E-11 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0245 c908202d453c9f0317a077c28ef397a6 482 SUPERFAMILY SSF52540 91 221 1.12E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1091 eda80265455ed51be711a3e4e835fe75 573 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.6E-39 T 15-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VIBNI_B1091 eda80265455ed51be711a3e4e835fe75 573 Gene3D G3DSA:3.40.190.10 123 312 2.8E-36 T 15-10-2018 VIBNI_B1091 eda80265455ed51be711a3e4e835fe75 573 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 8.9E-19 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B1091 eda80265455ed51be711a3e4e835fe75 573 SUPERFAMILY SSF53850 117 559 4.89E-57 T 15-10-2018 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 292 5.3E-17 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 311 1.2E-22 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 Pfam PF00005 ABC transporter 31 177 7.3E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 SUPERFAMILY SSF52540 5 248 7.02E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 Gene3D G3DSA:3.40.50.300 1 315 5.5E-93 T 15-10-2018 VIBNI_B0571 d053cd4acbd442864f7ddb5469ee8708 316 SMART SM00382 40 235 1.1E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0002 c25bf43cd99310f44a5b59b311cf782c 406 Pfam PF13614 AAA domain 110 296 6.7E-23 T 15-10-2018 IPR025669 AAA domain VIBNI_B0002 c25bf43cd99310f44a5b59b311cf782c 406 Gene3D G3DSA:1.10.1660.30 36 102 8.2E-6 T 15-10-2018 VIBNI_B0002 c25bf43cd99310f44a5b59b311cf782c 406 Gene3D G3DSA:3.40.50.300 107 397 7.1E-55 T 15-10-2018 VIBNI_B0002 c25bf43cd99310f44a5b59b311cf782c 406 SUPERFAMILY SSF52540 108 366 2.05E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 Gene3D G3DSA:1.10.220.30 373 461 1.2E-13 T 15-10-2018 VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 Pfam PF01706 FliG C-terminal domain 488 591 1.1E-13 T 15-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 Pfam PF14841 FliG middle domain 386 457 3.9E-12 T 15-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 SUPERFAMILY SSF48029 386 594 2.35E-33 T 15-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 Gene3D G3DSA:1.10.220.30 466 598 1.6E-19 T 15-10-2018 VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 PRINTS PR00954 Flagellar motor switch protein FliG signature 465 490 1.4E-5 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 PRINTS PR00954 Flagellar motor switch protein FliG signature 496 516 1.4E-5 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 PRINTS PR00954 Flagellar motor switch protein FliG signature 384 407 1.4E-5 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A0578 3a50b77f76c55c96bb8d67949bd431f2 601 PRINTS PR00954 Flagellar motor switch protein FliG signature 518 538 1.4E-5 T 15-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Pfam PF01551 Peptidase family M23 320 414 1.9E-33 T 15-10-2018 IPR016047 Peptidase M23 VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 SUPERFAMILY SSF51261 169 416 1.52E-73 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Gene3D G3DSA:3.10.450.350 185 289 6.0E-32 T 15-10-2018 VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Gene3D G3DSA:3.10.450.350 96 183 3.9E-12 T 15-10-2018 VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Pfam PF04225 Opacity-associated protein A LysM-like domain 102 180 3.1E-8 T 15-10-2018 IPR007340 Opacity-associated protein A VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Gene3D G3DSA:2.70.70.10 290 420 2.4E-50 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2550 1384c3a96876613432f3d50d91bd2ec8 448 Pfam PF08525 Opacity-associated protein A N-terminal motif 11 37 5.2E-7 T 15-10-2018 IPR013731 Opacity-associated protein A, N-terminal VIBNI_A1406 51977b1416cbf7bfa3941d1285a9a817 407 Pfam PF02687 FtsX-like permease family 295 399 9.9E-13 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A1406 51977b1416cbf7bfa3941d1285a9a817 407 Pfam PF12704 MacB-like periplasmic core domain 18 236 2.6E-17 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 Pfam PF00092 von Willebrand factor type A domain 172 332 6.3E-23 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 Pfam PF12034 Domain of unknown function (DUF3520) 346 530 1.7E-69 T 15-10-2018 IPR021908 Protein of unknown function DUF3520 VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 Pfam PF12450 von Willebrand factor 60 153 2.6E-34 T 15-10-2018 IPR022156 Uncharacterised protein YfbK, N-terminal VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 SMART SM00327 168 344 4.7E-28 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 SUPERFAMILY SSF53300 166 340 1.31E-36 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A1950 c351856cba77bd8d1b43d996a637dac9 530 Gene3D G3DSA:3.40.50.410 168 345 4.6E-32 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Gene3D G3DSA:1.10.10.60 457 512 1.8E-25 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Gene3D G3DSA:3.30.450.20 82 188 2.3E-19 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 512 1.0E-27 T 15-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SMART SM00091 80 146 1.2E-5 T 15-10-2018 IPR000014 PAS domain VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SUPERFAMILY SSF55021 1 68 3.89E-6 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SUPERFAMILY SSF52540 205 445 2.01E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Pfam PF00158 Sigma-54 interaction domain 206 370 8.9E-58 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SUPERFAMILY SSF55785 82 173 2.56E-5 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Gene3D G3DSA:3.40.50.300 194 375 7.3E-57 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Gene3D G3DSA:3.30.70.260 1 80 1.4E-25 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 Gene3D G3DSA:1.10.8.60 376 453 2.1E-19 T 15-10-2018 VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SMART SM00382 225 368 8.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1976 af514f90f61092be781943eb12397f58 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A1976 af514f90f61092be781943eb12397f58 513 SUPERFAMILY SSF46689 456 511 1.02E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0808 2d7c5de86cdeff4c9b332e51db48754c 163 Pfam PF02674 Colicin V production protein 4 142 2.7E-37 T 15-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 SUPERFAMILY SSF110849 41 132 6.28E-27 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 Gene3D G3DSA:1.10.10.2830 117 230 1.2E-33 T 15-10-2018 VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 Pfam PF02195 ParB-like nuclease domain 43 130 1.1E-27 T 15-10-2018 IPR003115 ParB/Sulfiredoxin VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 Gene3D G3DSA:3.90.1530.30 53 116 3.2E-27 T 15-10-2018 VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 SMART SM00470 40 130 2.4E-32 T 15-10-2018 IPR003115 ParB/Sulfiredoxin VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 213 2.4E-56 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VIBNI_A3869 bbd15facb85cce15155c9f9631f49375 293 SUPERFAMILY SSF109709 123 230 4.71E-32 T 15-10-2018 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 126 209 1.3E-35 T 15-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 Pfam PF02378 Phosphotransferase system, EIIC 250 513 3.2E-17 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 127 213 1.4E-15 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 9.8E-11 T 15-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 Gene3D G3DSA:3.40.50.2300 1 103 6.2E-21 T 15-10-2018 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 SUPERFAMILY SSF52794 124 225 1.92E-35 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 Gene3D G3DSA:3.40.50.2300 113 224 3.8E-39 T 15-10-2018 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 SUPERFAMILY SSF52794 3 102 1.53E-24 T 15-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VIBNI_B0823 1d72b02c9b170a4558cef0149dd7a2c8 579 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 563 1.8E-139 T 15-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 Gene3D G3DSA:3.40.50.740 118 482 1.2E-65 T 15-10-2018 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 SUPERFAMILY SSF50692 630 756 3.62E-17 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 Pfam PF00384 Molybdopterin oxidoreductase 106 489 1.9E-25 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 SUPERFAMILY SSF53706 44 624 3.27E-136 T 15-10-2018 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 Gene3D G3DSA:3.40.228.10 182 405 1.2E-65 T 15-10-2018 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 PIRSF PIRSF000144 1 759 0.0 T 15-10-2018 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 10 753 1.1E-282 T 15-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 VIBNI_A3724 b904ca1439a221a02d0a7b00d2ba0a37 761 Pfam PF01568 Molydopterin dinucleotide binding domain 641 728 7.4E-9 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VIBNI_A0387 f97c8ce6edfb1b10bb6212a682a896e0 241 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 240 4.0E-61 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VIBNI_A0387 f97c8ce6edfb1b10bb6212a682a896e0 241 SUPERFAMILY SSF64438 3 241 2.2E-82 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VIBNI_A0387 f97c8ce6edfb1b10bb6212a682a896e0 241 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 1.1E-72 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VIBNI_A0387 f97c8ce6edfb1b10bb6212a682a896e0 241 Gene3D G3DSA:3.60.140.10 1 241 8.6E-89 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 Gene3D G3DSA:3.90.1380.10 1 79 5.9E-31 T 15-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.4E-8 T 15-10-2018 IPR029144 Threonine synthase, N-terminal VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 SUPERFAMILY SSF53686 1 425 7.2E-129 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 366 4.8E-22 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 390 7.7E-111 T 15-10-2018 IPR004450 Threonine synthase-like VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 Gene3D G3DSA:3.40.50.1100 101 399 1.1E-134 T 15-10-2018 VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VIBNI_A0290 760b1404b25d680cb113f345be8d8c8c 427 Gene3D G3DSA:3.40.50.1100 83 392 1.1E-134 T 15-10-2018 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 SMART SM00984 300 387 1.0E-14 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.2E-103 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 SUPERFAMILY SSF48179 191 287 1.36E-30 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 SUPERFAMILY SSF51735 1 194 1.72E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 6.5E-27 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 2.5E-33 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Gene3D G3DSA:3.40.50.720 1 193 1.2E-59 T 15-10-2018 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 15-10-2018 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 PIRSF PIRSF500134 338 388 0.015 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 PIRSF PIRSF500134 1 347 4.0E-122 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.9E-7 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 PIRSF PIRSF000124 1 388 9.0E-138 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 Gene3D G3DSA:3.40.50.720 222 388 5.8E-67 T 15-10-2018 VIBNI_A3652 47d8039ca8259e9da672b3be6cf81182 388 SUPERFAMILY SSF52413 283 387 2.35E-27 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.4E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 SUPERFAMILY SSF46785 5 80 3.34E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 Pfam PF03466 LysR substrate binding domain 91 294 6.0E-30 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 Gene3D G3DSA:1.10.10.10 8 75 1.0E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 SUPERFAMILY SSF53850 91 297 3.88E-35 T 15-10-2018 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 Gene3D G3DSA:3.40.190.10 165 264 4.4E-45 T 15-10-2018 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0511 46f5a72f3a19dfdbbec2fc3825537d59 303 Gene3D G3DSA:3.40.190.10 103 291 4.4E-45 T 15-10-2018 VIBNI_A0189 cc40e30b9ce645a754c75cab733e7046 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.5E-53 T 15-10-2018 IPR016476 SH3 domain protein VIBNI_A0189 cc40e30b9ce645a754c75cab733e7046 203 SMART SM00287 20 86 2.0E-9 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A0189 cc40e30b9ce645a754c75cab733e7046 203 Gene3D G3DSA:2.30.30.40 25 85 1.4E-8 T 15-10-2018 VIBNI_A0189 cc40e30b9ce645a754c75cab733e7046 203 Pfam PF08239 Bacterial SH3 domain 32 83 3.8E-9 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A0189 cc40e30b9ce645a754c75cab733e7046 203 PIRSF PIRSF006158 1 203 2.4E-71 T 15-10-2018 IPR016476 SH3 domain protein VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF50249 132 199 2.98E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 7.2E-125 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:3.30.300.20 199 277 3.4E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF54814 201 278 1.57E-28 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF54814 279 342 3.84E-15 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SMART SM00316 133 200 5.6E-5 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:2.40.50.140 135 198 4.9E-17 T 15-10-2018 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 8.4E-8 T 15-10-2018 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Pfam PF08529 NusA N-terminal domain 4 123 6.2E-36 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF69705 1 126 3.14E-40 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:3.30.1480.10 1 129 8.3E-45 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.1E-21 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.4E-17 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:1.10.150.20 431 490 5.6E-24 T 15-10-2018 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF47794 348 414 1.38E-16 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 SUPERFAMILY SSF47794 429 492 4.4E-16 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:3.30.300.20 278 344 2.9E-24 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Gene3D G3DSA:1.10.150.20 352 421 8.5E-29 T 15-10-2018 VIBNI_A2798 8f57061beabe686bd03952ff633e930d 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.88 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 11 361 4.0E-66 T 15-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SUPERFAMILY SSF103190 51 270 2.59E-48 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 8.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 8.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 8.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 8.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Gene3D G3DSA:3.30.450.220 49 206 1.0E-55 T 15-10-2018 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Gene3D G3DSA:3.30.450.20 344 468 3.9E-10 T 15-10-2018 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SUPERFAMILY SSF47384 472 550 1.53E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Gene3D G3DSA:1.10.287.130 469 550 2.0E-21 T 15-10-2018 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 596 711 9.2E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 549 2.4E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SMART SM00448 737 849 2.0E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SUPERFAMILY SSF52172 736 852 1.02E-29 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Gene3D G3DSA:3.40.50.2300 717 855 2.0E-33 T 15-10-2018 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Pfam PF09308 LuxQ, periplasmic 39 278 1.9E-94 T 15-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SUPERFAMILY SSF55874 538 715 1.1E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SUPERFAMILY SSF55785 347 462 8.37E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SMART SM00388 484 549 2.4E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Gene3D G3DSA:3.30.565.10 551 716 2.1E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 SMART SM00387 596 712 2.6E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1295 52ed6b928f695b365a99a7348826d910 869 Pfam PF00072 Response regulator receiver domain 739 848 1.5E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 SUPERFAMILY SSF53335 3 212 7.85E-54 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 PIRSF PIRSF023956 1 213 9.0E-73 T 15-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 213 34.135 T 15-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 6 213 3.5E-77 T 15-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 Gene3D G3DSA:3.40.50.150 1 213 5.4E-60 T 15-10-2018 VIBNI_A1413 38b47805a8533dc09c2dc9649c76440e 213 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 212 2.1E-71 T 15-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 SUPERFAMILY SSF46689 65 119 3.4E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 Gene3D G3DSA:1.10.10.60 7 121 4.7E-21 T 15-10-2018 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 Pfam PF12833 Helix-turn-helix domain 42 113 1.4E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 4.9E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 4.9E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0459 44b1a2430324d50990538913af01e160 136 SMART SM00342 32 112 1.6E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Gene3D G3DSA:2.30.30.30 115 195 2.5E-32 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 3.7E-56 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 SUPERFAMILY SSF50249 2 125 8.57E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.4E-33 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 SMART SM01382 124 252 1.5E-91 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Gene3D G3DSA:2.40.50.140 1 114 1.8E-50 T 15-10-2018 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 15-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 PIRSF PIRSF002158 13 274 2.4E-99 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 SMART SM01383 42 118 2.5E-45 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 6.6E-131 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.213 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VIBNI_A3175 394cfd264d24bea5d5de9250c3462938 274 SUPERFAMILY SSF50104 127 272 3.85E-61 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 SUPERFAMILY SSF46785 13 123 1.85E-44 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.663 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 PIRSF PIRSF018282 2 445 2.7E-247 T 15-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Pfam PF17193 MukF C-terminal domain 288 445 3.1E-78 T 15-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Gene3D G3DSA:1.10.10.10 29 123 6.0E-46 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 SUPERFAMILY SSF140570 124 286 8.37E-77 T 15-10-2018 IPR036141 MukF, middle domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Gene3D G3DSA:1.10.225.40 358 445 8.5E-39 T 15-10-2018 IPR038198 MukF, C-terminal domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Gene3D G3DSA:1.20.58.590 124 316 5.0E-81 T 15-10-2018 IPR036141 MukF, middle domain superfamily VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Pfam PF03882 MukF winged-helix domain 10 122 1.1E-53 T 15-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VIBNI_A2106 a529d0283d94691e1b2a63253c60e7de 445 Pfam PF17192 MukF middle domain 126 286 2.8E-79 T 15-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 Gene3D G3DSA:3.10.580.10 201 330 1.9E-41 T 15-10-2018 VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 SMART SM01091 342 420 7.1E-21 T 15-10-2018 IPR005170 Transporter-associated domain VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 Pfam PF00571 CBS domain 279 326 2.2E-4 T 15-10-2018 IPR000644 CBS domain VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 SUPERFAMILY SSF54631 192 329 8.59E-24 T 15-10-2018 VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 Pfam PF03471 Transporter associated domain 344 418 5.4E-15 T 15-10-2018 IPR005170 Transporter-associated domain VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 Pfam PF01595 Domain of unknown function DUF21 12 181 1.8E-50 T 15-10-2018 IPR002550 CNNM, transmembrane domain VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 SUPERFAMILY SSF56176 339 418 3.0E-19 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A0162 3fefe53c102352f9262d95ed43b9a68c 420 Gene3D G3DSA:3.30.465.10 340 418 9.0E-26 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 SUPERFAMILY SSF51735 14 254 1.04E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 Pfam PF00106 short chain dehydrogenase 14 198 7.5E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 Gene3D G3DSA:3.40.50.720 11 261 8.7E-56 T 15-10-2018 VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.9E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.9E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.9E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.3E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.3E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.3E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.3E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.3E-23 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 PIRSF PIRSF000126 1 269 2.2E-56 T 15-10-2018 VIBNI_B0246 76f7c12cb7216cd050f0f58cd70ef291 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 PIRSF PIRSF006250 16 295 1.7E-101 T 15-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.0E-27 T 15-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 SUPERFAMILY SSF51690 130 294 8.24E-60 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.3E-94 T 15-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 SUPERFAMILY SSF54675 15 128 3.65E-33 T 15-10-2018 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 Gene3D G3DSA:3.90.1170.20 21 293 1.3E-126 T 15-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 Gene3D G3DSA:3.20.20.70 138 284 1.3E-126 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0177 dbb0842eefc61860ef90c0a8c55218dc 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.1E-56 T 15-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 282 3.1E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 386 572 3.6E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 SUPERFAMILY SSF161098 315 578 6.15E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 SUPERFAMILY SSF161098 25 299 7.19E-51 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 Gene3D G3DSA:1.10.3720.10 30 295 1.4E-58 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3285 3c29acfc1c9c8abe45dd28de53647efb 582 Gene3D G3DSA:1.10.3720.10 314 578 1.1E-42 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 SUPERFAMILY SSF47240 1 153 4.38E-57 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 Pfam PF00210 Ferritin-like domain 8 143 9.5E-41 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PIRSF PIRSF002560 1 157 2.1E-73 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.0E-74 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 Gene3D G3DSA:1.20.1260.10 1 158 9.7E-74 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A3180 cb4bbbed8f103e3665fa7c49dbd03be1 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.5E-82 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 Gene3D G3DSA:1.20.140.10 205 389 1.6E-49 T 15-10-2018 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 PIRSF PIRSF016578 1 389 9.9E-129 T 15-10-2018 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 367 2.3E-39 T 15-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 Gene3D G3DSA:1.10.540.10 1 109 1.5E-26 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 SUPERFAMILY SSF47203 232 381 1.56E-16 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 SUPERFAMILY SSF56645 4 201 1.96E-26 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VIBNI_B1950 942acd09280f8ee23663d73c0c5f03c2 389 Gene3D G3DSA:2.40.110.10 110 203 8.9E-26 T 15-10-2018 VIBNI_A2877 27a23d79155e83391b45bdad287e0acf 384 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 112 313 2.3E-25 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_A2877 27a23d79155e83391b45bdad287e0acf 384 Gene3D G3DSA:3.40.640.10 42 287 7.3E-56 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2877 27a23d79155e83391b45bdad287e0acf 384 SUPERFAMILY SSF53383 26 376 5.29E-75 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2877 27a23d79155e83391b45bdad287e0acf 384 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 15-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 Gene3D G3DSA:3.50.30.20 2 151 9.9E-64 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 49.09 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.1E-47 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 SUPERFAMILY SSF52021 4 142 1.7E-58 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 5.7E-151 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 SMART SM01097 3 133 1.7E-94 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 SUPERFAMILY SSF52317 153 377 1.99E-63 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.6E-54 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 15-10-2018 VIBNI_A0239 e1d739cd92ec4b01d735996260ce2fed 379 Gene3D G3DSA:3.40.50.880 152 378 1.1E-76 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2813 eca13205395ba8c82570bfb00ce39cee 430 Gene3D G3DSA:2.70.70.10 265 394 7.9E-81 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2813 eca13205395ba8c82570bfb00ce39cee 430 SUPERFAMILY SSF51261 143 389 5.13E-71 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2813 eca13205395ba8c82570bfb00ce39cee 430 Pfam PF01551 Peptidase family M23 294 388 9.2E-31 T 15-10-2018 IPR016047 Peptidase M23 VIBNI_A2813 eca13205395ba8c82570bfb00ce39cee 430 Gene3D G3DSA:3.10.450.350 172 408 7.9E-81 T 15-10-2018 VIBNI_A2813 eca13205395ba8c82570bfb00ce39cee 430 Gene3D G3DSA:3.10.450.350 69 157 1.5E-9 T 15-10-2018 VIBNI_B2038 87c53341daa0ead9e0d791e6fc434b68 328 Gene3D G3DSA:3.40.190.170 28 328 5.6E-97 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B2038 87c53341daa0ead9e0d791e6fc434b68 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 278 3.3E-72 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B2038 87c53341daa0ead9e0d791e6fc434b68 328 PIRSF PIRSF006470 1 328 1.4E-82 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B2038 87c53341daa0ead9e0d791e6fc434b68 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 314 6.5E-87 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 Gene3D G3DSA:1.10.287.470 67 144 1.9E-46 T 15-10-2018 VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 35 248 6.9E-21 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 24 255 1.5E-47 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 Gene3D G3DSA:2.40.50.100 33 179 1.9E-46 T 15-10-2018 VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 SUPERFAMILY SSF111369 23 250 3.01E-30 T 15-10-2018 VIBNI_A2673 7c07100851e82d047f46c2ad70848a98 260 Gene3D G3DSA:2.40.30.170 22 248 1.9E-46 T 15-10-2018 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Gene3D G3DSA:3.30.230.70 233 548 2.6E-114 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF55666 144 234 5.61E-29 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.216 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 4.7E-13 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 5.9E-23 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF55666 449 548 8.27E-28 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Gene3D G3DSA:3.30.1370.10 549 620 9.5E-19 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Gene3D G3DSA:3.30.230.70 1 227 2.1E-77 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF00013 KH domain 555 613 2.6E-8 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF46915 238 319 4.18E-19 T 15-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF54791 551 628 7.06E-16 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SMART SM00322 551 616 5.2E-11 T 15-10-2018 IPR004087 K Homology domain GO:0003676 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 PIRSF PIRSF005499 1 707 2.2E-297 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF50249 606 692 4.37E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF00575 S1 RNA binding domain 618 689 1.2E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Gene3D G3DSA:2.40.50.140 621 692 7.7E-30 T 15-10-2018 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SMART SM00316 619 689 8.8E-28 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF54211 3 143 9.11E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 SUPERFAMILY SSF54211 292 487 5.06E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 4.7E-18 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2792 72ce9620256b80d81e7101b925cb5918 707 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 1.8E-20 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF52172 1188 1310 5.12E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF55874 863 1037 2.75E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.40.190.10 270 500 2.9E-45 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1035 1.9E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF53850 34 251 5.83E-23 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.40.50.2300 1173 1309 2.6E-38 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.30.565.10 873 1042 2.1E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF55785 544 657 1.44E-6 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SMART SM00448 1190 1306 2.7E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SMART SM00387 921 1037 1.6E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF47226 1289 1462 1.01E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.40.190.10 118 210 1.5E-23 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.40.190.10 367 463 2.9E-45 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.40.190.10 33 248 1.5E-23 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 282 500 1.5E-23 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF00072 Response regulator receiver domain 1192 1306 7.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF53850 281 504 2.17E-26 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SMART SM00062 33 252 6.9E-12 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SMART SM00062 279 504 1.2E-8 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF55785 698 798 6.66E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:1.10.287.130 784 872 1.0E-23 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:3.30.450.20 662 783 2.5E-6 T 15-10-2018 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 250 8.5E-18 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SUPERFAMILY SSF47384 795 875 3.73E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 SMART SM00388 809 874 1.8E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Gene3D G3DSA:1.20.120.160 1363 1469 9.5E-13 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 809 874 2.5E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 Pfam PF01627 Hpt domain 1384 1462 6.9E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1021 1034 5.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 990 5.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 997 1015 5.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2043 9385a2338c4a11a3c7d6ec76614236be 1469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 5.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Pfam PF00750 tRNA synthetases class I (R) 98 447 6.3E-161 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 SMART SM01016 5 87 4.1E-27 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 SUPERFAMILY SSF47323 455 602 1.24E-32 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 SUPERFAMILY SSF55190 2 97 1.44E-21 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 4.2E-25 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 4.2E-25 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 4.2E-25 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 4.2E-25 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 483 1.4E-163 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Gene3D G3DSA:3.40.50.620 108 454 1.3E-109 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 SUPERFAMILY SSF52374 110 454 1.06E-93 T 15-10-2018 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Pfam PF05746 DALR anticodon binding domain 461 602 5.9E-33 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Gene3D G3DSA:3.30.1360.70 1 106 1.3E-33 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 SMART SM00836 461 602 9.3E-37 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.5E-19 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 602 27.699 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2536 15a9e3640a04bd75cd4bcafed8fcece4 602 Gene3D G3DSA:1.10.730.10 455 602 8.7E-35 T 15-10-2018 VIBNI_A0313 379ad619b8e32ef4bd9062b9e80b5bb6 237 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 6 237 49.739 T 15-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VIBNI_A0313 379ad619b8e32ef4bd9062b9e80b5bb6 237 Gene3D G3DSA:3.40.50.150 3 233 5.1E-53 T 15-10-2018 VIBNI_A0313 379ad619b8e32ef4bd9062b9e80b5bb6 237 Pfam PF05175 Methyltransferase small domain 40 125 1.3E-12 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VIBNI_A0313 379ad619b8e32ef4bd9062b9e80b5bb6 237 SUPERFAMILY SSF53335 3 168 3.03E-26 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0313 379ad619b8e32ef4bd9062b9e80b5bb6 237 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 112 118 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A3200 dd2126e5ed501d0ded8db957284c8cfe 159 Gene3D G3DSA:2.30.110.10 2 120 1.9E-22 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_A3200 dd2126e5ed501d0ded8db957284c8cfe 159 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 84 9.9E-11 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_A3200 dd2126e5ed501d0ded8db957284c8cfe 159 SUPERFAMILY SSF50475 10 84 1.11E-13 T 15-10-2018 VIBNI_A1718 72c633ee4575bfad9937948b357dbf82 323 Gene3D G3DSA:1.20.950.20 110 323 4.6E-63 T 15-10-2018 VIBNI_A1718 72c633ee4575bfad9937948b357dbf82 323 Pfam PF01292 Prokaryotic cytochrome b561 117 296 1.4E-22 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VIBNI_A1718 72c633ee4575bfad9937948b357dbf82 323 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 114 316 1.6E-55 T 15-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VIBNI_A1718 72c633ee4575bfad9937948b357dbf82 323 SUPERFAMILY SSF81342 111 318 5.34E-40 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VIBNI_A2881 105c200debead326573153fea6cf8ec4 79 Gene3D G3DSA:1.20.58.660 11 79 3.8E-14 T 15-10-2018 VIBNI_A2881 105c200debead326573153fea6cf8ec4 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 2.2E-11 T 15-10-2018 IPR007420 Protein of unknown function DUF465 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Gene3D G3DSA:1.10.8.60 166 240 1.9E-22 T 15-10-2018 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Gene3D G3DSA:1.20.272.10 241 345 4.1E-44 T 15-10-2018 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Gene3D G3DSA:1.10.3710.10 346 447 1.1E-36 T 15-10-2018 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 1.2E-67 T 15-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Pfam PF16193 AAA C-terminal domain 188 267 3.8E-20 T 15-10-2018 IPR032423 AAA C-terminal domain VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 3.4E-16 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 Gene3D G3DSA:3.40.50.300 7 165 2.3E-48 T 15-10-2018 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 SUPERFAMILY SSF48019 252 434 2.66E-73 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 SUPERFAMILY SSF52540 12 235 2.67E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2321 9b42b2e6a3b7b11e767b6e0ccb747013 448 SMART SM00382 50 166 7.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 PIRSF PIRSF000538 4 540 1.1E-76 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 264 1.6E-29 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 SUPERFAMILY SSF53067 6 265 1.73E-55 T 15-10-2018 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 490 1.0E-46 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 Gene3D G3DSA:3.30.420.460 324 526 2.2E-172 T 15-10-2018 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 Gene3D G3DSA:3.30.420.40 7 514 2.2E-172 T 15-10-2018 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 SUPERFAMILY SSF53067 281 535 2.0E-52 T 15-10-2018 VIBNI_B1753 4a643fe799288480d733df82d7dcaa79 541 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 7 537 4.9E-197 T 15-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 VIBNI_A2637 9fc9bc7963e555f147658cd3d88a00ac 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.1E-20 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VIBNI_A2637 9fc9bc7963e555f147658cd3d88a00ac 249 SUPERFAMILY SSF117143 77 207 1.96E-16 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VIBNI_A2637 9fc9bc7963e555f147658cd3d88a00ac 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.6E-33 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VIBNI_A2637 9fc9bc7963e555f147658cd3d88a00ac 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VIBNI_A1507 0d341fe9d5190ade5ee4f8769a3de122 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 288 299 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A1507 0d341fe9d5190ade5ee4f8769a3de122 501 Gene3D G3DSA:3.40.605.10 36 487 3.1E-166 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1507 0d341fe9d5190ade5ee4f8769a3de122 501 Pfam PF00171 Aldehyde dehydrogenase family 27 489 1.5E-160 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A1507 0d341fe9d5190ade5ee4f8769a3de122 501 SUPERFAMILY SSF53720 20 491 3.67E-156 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A1507 0d341fe9d5190ade5ee4f8769a3de122 501 Gene3D G3DSA:3.40.309.10 264 458 3.1E-166 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 Gene3D G3DSA:3.40.1280.10 1 160 2.5E-67 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.366 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 Gene3D G3DSA:1.10.1270.20 161 247 1.0E-32 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 PIRSF PIRSF000386 1 246 9.8E-101 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.0E-69 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 SUPERFAMILY SSF75217 1 244 9.16E-102 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A0167 8e8a90b79b61e54eef43b9f1a774e677 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 5.7E-108 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Gene3D G3DSA:3.40.50.2300 261 590 5.7E-62 T 15-10-2018 VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Gene3D G3DSA:3.40.50.2300 362 591 5.7E-62 T 15-10-2018 VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Pfam PF04348 LppC putative lipoprotein 39 595 4.8E-158 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Gene3D G3DSA:1.25.40.650 149 254 2.2E-21 T 15-10-2018 VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 SUPERFAMILY SSF53822 260 594 2.77E-66 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Gene3D G3DSA:1.25.40.10 22 144 5.5E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0217 66ef275701bd8cfbecc4f31d32cd85bd 597 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 597 27.793 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA VIBNI_A0993 0b182da5508bf37b0eec0ee689395045 138 SUPERFAMILY SSF51316 12 134 1.57E-29 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_A0993 0b182da5508bf37b0eec0ee689395045 138 Gene3D G3DSA:2.170.150.70 14 124 1.9E-15 T 15-10-2018 VIBNI_A0993 0b182da5508bf37b0eec0ee689395045 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 36 110 8.2E-9 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_A0666 06ae5530e86327296d65f7102bc3662b 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 15-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VIBNI_A0666 06ae5530e86327296d65f7102bc3662b 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 5.6E-22 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 165 1.4E-37 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 288 1.1E-34 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 SUPERFAMILY SSF51735 5 166 1.06E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 Gene3D G3DSA:3.40.50.720 1 167 9.8E-46 T 15-10-2018 VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 SUPERFAMILY SSF48179 168 291 8.05E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 PIRSF PIRSF000103 2 295 1.5E-68 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A0851 98387dab0d7691fb142dbe253d8f4d10 295 Gene3D G3DSA:1.10.1040.10 168 295 5.9E-36 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B0086 72ae84a4def53790239f4ad6b0d89f2c 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 12 257 3.3E-21 T 15-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VIBNI_B0086 72ae84a4def53790239f4ad6b0d89f2c 294 Gene3D G3DSA:3.30.420.40 118 264 1.3E-59 T 15-10-2018 VIBNI_B0086 72ae84a4def53790239f4ad6b0d89f2c 294 SUPERFAMILY SSF53067 6 114 5.54E-16 T 15-10-2018 VIBNI_B0086 72ae84a4def53790239f4ad6b0d89f2c 294 Gene3D G3DSA:3.30.420.40 9 117 1.3E-59 T 15-10-2018 VIBNI_B0086 72ae84a4def53790239f4ad6b0d89f2c 294 SUPERFAMILY SSF53067 117 281 6.29E-31 T 15-10-2018 VIBNI_A1387 3a9baa9f3d3d382f03f45dbd50352ff4 222 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 8.0E-9 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A1387 3a9baa9f3d3d382f03f45dbd50352ff4 222 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A1387 3a9baa9f3d3d382f03f45dbd50352ff4 222 Gene3D G3DSA:1.20.120.1760 3 201 1.8E-17 T 15-10-2018 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.2E-19 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.2E-19 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.2E-19 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 1.2E-19 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.2E-19 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 Gene3D G3DSA:3.40.50.720 129 462 4.6E-115 T 15-10-2018 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 SUPERFAMILY SSF55347 288 451 1.67E-53 T 15-10-2018 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 3.3E-21 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 Gene3D G3DSA:3.30.360.10 287 452 4.6E-115 T 15-10-2018 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 SUPERFAMILY SSF51735 128 304 1.81E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.3E-112 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.1E-45 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1515 f0c1f73d06a63f0e81b18b3c7d13483d 479 SMART SM00846 127 288 3.6E-51 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 4.7E-14 T 15-10-2018 IPR002177 DNA-binding protein Dps VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 4.7E-14 T 15-10-2018 IPR002177 DNA-binding protein Dps VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 4.7E-14 T 15-10-2018 IPR002177 DNA-binding protein Dps VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 Pfam PF00210 Ferritin-like domain 18 156 1.1E-26 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 Gene3D G3DSA:1.20.1260.10 1 156 2.0E-56 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 SUPERFAMILY SSF47240 1 156 1.28E-45 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VIBNI_A3750 fb47c799ae5eaedf29f85239dc4a30ad 156 PIRSF PIRSF005900 1 156 2.1E-46 T 15-10-2018 IPR002177 DNA-binding protein Dps VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 Gene3D G3DSA:2.60.120.10 10 138 4.8E-44 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 2.6E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 SUPERFAMILY SSF51206 8 137 4.71E-35 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 SMART SM00419 160 208 4.2E-17 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 SMART SM00100 2 122 2.3E-27 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A3206 1e631f3f8a79b31e78097badec0967e9 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3425 91a91c08e91ee20fb89b23d770f0a17c 156 Pfam PF07811 TadE-like protein 10 50 1.8E-5 T 15-10-2018 IPR012495 TadE-like VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Gene3D G3DSA:1.25.40.10 184 283 4.5E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Pfam PF08238 Sel1 repeat 137 170 0.13 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Pfam PF08238 Sel1 repeat 81 97 0.0057 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Pfam PF08238 Sel1 repeat 208 239 2.2E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Pfam PF08238 Sel1 repeat 189 206 9.7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 Gene3D G3DSA:1.25.40.10 24 183 4.1E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SMART SM00671 67 97 40.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SMART SM00671 243 276 150.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SMART SM00671 135 170 0.016 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SMART SM00671 171 206 15.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SMART SM00671 207 242 3.9E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1575 243fe04748139f6dabed7f02f563d21a 364 SUPERFAMILY SSF81901 60 279 3.05E-27 T 15-10-2018 VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 Gene3D G3DSA:3.40.50.2000 453 614 3.9E-24 T 15-10-2018 VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 SUPERFAMILY SSF53756 312 630 2.15E-41 T 15-10-2018 VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 Gene3D G3DSA:3.90.550.10 15 314 1.3E-52 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 Gene3D G3DSA:3.40.50.2000 446 627 3.9E-24 T 15-10-2018 VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 Pfam PF00535 Glycosyl transferase family 2 73 238 1.5E-23 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 SUPERFAMILY SSF53448 71 287 6.0E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3638 54f1c60624c4f3e1ae427be2b287cfc3 633 Pfam PF00534 Glycosyl transferases group 1 518 612 5.8E-15 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.6E-169 T 15-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 PIRSF PIRSF001434 1 391 1.9E-123 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 5.0E-117 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 Gene3D G3DSA:3.90.1150.10 256 390 6.4E-40 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 SUPERFAMILY SSF53383 23 388 1.02E-99 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1368 517a7881cc909988c162fa8ac872ff56 402 Gene3D G3DSA:3.40.640.10 2 255 3.0E-77 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 PIRSF PIRSF000390 257 409 4.5E-7 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 PIRSF PIRSF000390 43 217 2.1E-40 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 SUPERFAMILY SSF53383 46 405 8.76E-57 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 280 402 2.5E-6 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 45 194 2.9E-40 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 Gene3D G3DSA:3.40.640.10 40 213 5.9E-45 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3468 56a7f28d0304dcdc384b8937e1edf85b 411 Gene3D G3DSA:3.90.1150.10 280 409 1.7E-15 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 SUPERFAMILY SSF90002 254 373 1.29E-11 T 15-10-2018 VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 SUPERFAMILY SSF52540 4 224 4.69E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 372 2.4E-17 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 Gene3D G3DSA:3.40.50.300 2 224 4.9E-40 T 15-10-2018 VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 206 7.9E-27 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B0250 4d9c76d99a3128ddad8daef5f06aa93a 399 SMART SM00833 253 373 2.5E-32 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VIBNI_A1883 1fca254f440b9966442b1a05570817c5 372 Gene3D G3DSA:3.40.50.2300 56 147 2.6E-6 T 15-10-2018 VIBNI_A1883 1fca254f440b9966442b1a05570817c5 372 Pfam PF13407 Periplasmic binding protein domain 77 321 5.1E-12 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1883 1fca254f440b9966442b1a05570817c5 372 SUPERFAMILY SSF53822 60 350 9.42E-22 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1883 1fca254f440b9966442b1a05570817c5 372 Gene3D G3DSA:3.40.50.2300 166 352 9.5E-10 T 15-10-2018 VIBNI_A1229 fc0b818bb92804af0a5f40b5add5d4b9 384 SUPERFAMILY SSF53901 14 226 3.96E-18 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1229 fc0b818bb92804af0a5f40b5add5d4b9 384 PIRSF PIRSF000429 4 381 2.7E-26 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A1229 fc0b818bb92804af0a5f40b5add5d4b9 384 SUPERFAMILY SSF53901 242 371 3.84E-22 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1229 fc0b818bb92804af0a5f40b5add5d4b9 384 Pfam PF02803 Thiolase, C-terminal domain 246 362 4.6E-6 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_A1229 fc0b818bb92804af0a5f40b5add5d4b9 384 Gene3D G3DSA:3.40.47.10 1 382 8.0E-93 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.2E-32 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 SUPERFAMILY SSF141734 13 122 1.14E-44 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.305 T 15-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 4.6E-31 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 SUPERFAMILY SSF101386 123 210 3.71E-25 T 15-10-2018 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Gene3D G3DSA:1.10.287.1080 120 211 8.3E-30 T 15-10-2018 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 3.0E-20 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Gene3D G3DSA:3.10.20.400 5 102 3.2E-36 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VIBNI_A2285 b70c9646f7037db15876cb86fd1d8952 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 1.5E-17 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 Gene3D G3DSA:1.20.1050.10 132 248 1.8E-111 T 15-10-2018 VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 SUPERFAMILY SSF52833 38 131 5.36E-16 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 243 1.3E-10 T 15-10-2018 VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 Gene3D G3DSA:3.40.30.10 17 254 1.8E-111 T 15-10-2018 VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 SUPERFAMILY SSF47616 132 278 4.78E-33 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B0050 f509a5343f6d96b43a14bcb038fc0dd7 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 45 126 1.5E-5 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 165 185 4.4E-26 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 4.4E-26 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 204 221 4.4E-26 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 246 264 4.4E-26 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 142 164 4.4E-26 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 Gene3D G3DSA:2.120.10.30 2 299 5.1E-87 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 265 2.0E-70 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region VIBNI_B0766 1419f4963ea9fb1295720984630243ec 309 SUPERFAMILY SSF63829 9 293 6.21E-54 T 15-10-2018 VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 SUPERFAMILY SSF51338 61 589 1.21E-11 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 Pfam PF07969 Amidohydrolase family 97 589 1.1E-52 T 15-10-2018 IPR013108 Amidohydrolase 3 VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 Gene3D G3DSA:3.20.20.140 103 550 4.5E-86 T 15-10-2018 VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 Gene3D G3DSA:2.30.40.10 51 567 4.5E-86 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 SUPERFAMILY SSF51556 102 551 8.93E-25 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0285 e516ddcb8a1cb12f4ff2ff2aeffa205c 640 Gene3D G3DSA:3.10.310.70 133 246 4.5E-86 T 15-10-2018 VIBNI_A2433 be4d6ab66940d528a0d640124020a091 325 PIRSF PIRSF006470 3 321 1.5E-71 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2433 be4d6ab66940d528a0d640124020a091 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 308 8.7E-76 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2433 be4d6ab66940d528a0d640124020a091 325 Gene3D G3DSA:3.40.190.170 16 324 1.5E-87 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2433 be4d6ab66940d528a0d640124020a091 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 28 284 3.4E-55 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 Gene3D G3DSA:3.20.20.140 56 410 9.1E-135 T 15-10-2018 VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 Pfam PF01979 Amidohydrolase family 51 424 1.9E-16 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 SUPERFAMILY SSF51556 55 371 4.81E-90 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 SUPERFAMILY SSF51338 1 431 3.34E-29 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B1228 d4e4e0c7bf582924b4a08a54be7bf268 444 Gene3D G3DSA:2.30.40.10 6 425 9.1E-135 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A1543 57396fb1af4a0e0427583f0e19207245 390 Gene3D G3DSA:3.40.50.2300 73 323 1.2E-25 T 15-10-2018 VIBNI_A1543 57396fb1af4a0e0427583f0e19207245 390 Pfam PF13407 Periplasmic binding protein domain 63 321 1.8E-13 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1543 57396fb1af4a0e0427583f0e19207245 390 SUPERFAMILY SSF53822 60 348 2.55E-34 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1543 57396fb1af4a0e0427583f0e19207245 390 Gene3D G3DSA:3.40.50.2300 157 306 1.2E-25 T 15-10-2018 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 Gene3D G3DSA:3.90.550.10 2 286 7.9E-84 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 Pfam PF00483 Nucleotidyl transferase 6 273 4.0E-62 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 SUPERFAMILY SSF53448 4 358 1.6E-68 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 SUPERFAMILY SSF51161 294 403 1.1E-18 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 378 6.5E-151 T 15-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 Gene3D G3DSA:2.160.10.10 287 404 5.4E-35 T 15-10-2018 VIBNI_A2118 ea77ddc255625034c1b6fed527c329f1 406 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 48.992 T 15-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 Pfam PF00171 Aldehyde dehydrogenase family 14 473 2.8E-173 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 SUPERFAMILY SSF53720 4 477 7.07E-175 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 Gene3D G3DSA:3.40.309.10 257 446 2.4E-185 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 Gene3D G3DSA:3.40.605.10 14 469 2.4E-185 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 25 472 1.1E-215 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VIBNI_B0746 ab3c0e48ca58a5e86432b39384aef1ba 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.9E-34 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 Gene3D G3DSA:1.10.287.990 20 82 4.4E-25 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PIRSF PIRSF000349 1 194 7.5E-83 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.5E-37 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 SUPERFAMILY SSF54719 84 193 3.14E-42 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.0E-21 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.0E-21 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.0E-21 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 4.0E-21 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.0E-21 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 SUPERFAMILY SSF46609 1 84 4.32E-35 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A0892 1c5a1c1031d43058d5048cf6bb87e5a6 194 Gene3D G3DSA:2.40.500.20 83 194 8.8E-41 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 9.5E-107 T 15-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 Gene3D G3DSA:3.20.20.70 2 246 1.6E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 15-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 PIRSF PIRSF000371 44 245 5.2E-46 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 PIRSF PIRSF000371 1 47 2.2E-11 T 15-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 SUPERFAMILY SSF102114 23 220 1.18E-30 T 15-10-2018 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 Pfam PF13353 4Fe-4S single cluster domain 16 147 7.1E-21 T 15-10-2018 VIBNI_A1092 4ffe29ae164654be5e5b0d43a7716a41 246 Pfam PF04055 Radical SAM superfamily 24 178 8.2E-33 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2570 74eb79a2dd66026ee1cdcb196c217863 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.5E-59 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VIBNI_A2570 74eb79a2dd66026ee1cdcb196c217863 252 Gene3D G3DSA:3.40.1390.30 97 223 2.7E-82 T 15-10-2018 VIBNI_A2570 74eb79a2dd66026ee1cdcb196c217863 252 Gene3D G3DSA:3.40.1390.30 14 237 2.7E-82 T 15-10-2018 VIBNI_A2570 74eb79a2dd66026ee1cdcb196c217863 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 1.3E-65 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VIBNI_A2570 74eb79a2dd66026ee1cdcb196c217863 252 SUPERFAMILY SSF102705 1 251 1.7E-81 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VIBNI_B1191 bd6550028af8e54e794a5dd61596e4d7 189 Pfam PF04264 YceI-like domain 25 184 1.1E-35 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VIBNI_B1191 bd6550028af8e54e794a5dd61596e4d7 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 43.855 T 15-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI VIBNI_B1191 bd6550028af8e54e794a5dd61596e4d7 189 SUPERFAMILY SSF101874 23 188 1.31E-48 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VIBNI_B1191 bd6550028af8e54e794a5dd61596e4d7 189 Gene3D G3DSA:2.40.128.110 23 189 2.2E-48 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VIBNI_B1191 bd6550028af8e54e794a5dd61596e4d7 189 SMART SM00867 24 187 4.2E-62 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 SMART SM00065 17 163 8.6E-21 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 SUPERFAMILY SSF55781 2 158 6.54E-31 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 727 1.5E-135 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Pfam PF01590 GAF domain 17 153 2.7E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 5.8E-23 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 460 479 5.8E-23 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 5.8E-23 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 5.8E-23 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 2.4E-93 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 392 6.8E-16 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 SUPERFAMILY SSF51621 422 714 9.16E-94 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 352 363 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 SUPERFAMILY SSF47831 199 310 3.53E-27 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Gene3D G3DSA:3.50.30.10 174 400 1.6E-58 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Gene3D G3DSA:1.10.274.10 191 315 1.6E-58 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 295 1.6E-24 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Gene3D G3DSA:3.20.20.60 401 741 1.2E-98 T 15-10-2018 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 SUPERFAMILY SSF52009 294 414 1.06E-25 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VIBNI_A0330 73e093630e8f38c728ff2771fda83d1b 749 Gene3D G3DSA:3.30.450.40 1 162 1.7E-39 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 SUPERFAMILY SSF55136 170 295 6.8E-14 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 SMART SM00342 22 105 2.1E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 Gene3D G3DSA:1.10.10.60 59 115 2.3E-15 T 15-10-2018 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 SMART SM00871 133 293 1.0E-10 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 SUPERFAMILY SSF46689 58 107 2.87E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 Gene3D G3DSA:3.20.80.10 133 295 2.4E-22 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 Pfam PF12833 Helix-turn-helix domain 28 105 5.5E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 Gene3D G3DSA:1.10.10.60 2 58 2.4E-14 T 15-10-2018 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 Pfam PF06445 GyrI-like small molecule binding domain 134 292 1.5E-14 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain VIBNI_B0022 a593b6b754d454ca1a04bd696ce6627f 297 SUPERFAMILY SSF46689 6 56 2.69E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1309 ad190b50dfdfb52c568188959b646357 98 Gene3D G3DSA:3.40.1440.10 2 94 1.1E-26 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VIBNI_B1309 ad190b50dfdfb52c568188959b646357 98 Pfam PF01541 GIY-YIG catalytic domain 7 78 2.1E-15 T 15-10-2018 IPR000305 GIY-YIG endonuclease VIBNI_B1309 ad190b50dfdfb52c568188959b646357 98 SUPERFAMILY SSF82771 6 77 4.58E-15 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 15-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.858 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 Pfam PF00886 Ribosomal protein S16 8 68 7.0E-24 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.3E-27 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0165 c4c218f712dc3153d47a8bac20038b45 82 SUPERFAMILY SSF54565 1 76 8.5E-28 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 Gene3D G3DSA:3.20.20.70 344 646 4.0E-51 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 Pfam PF00294 pfkB family carbohydrate kinase 9 324 2.5E-46 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 645 4.5E-130 T 15-10-2018 IPR018659 Protein of unknown function DUF2090 VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 3.4E-128 T 15-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 Gene3D G3DSA:3.40.1190.20 11 314 1.7E-91 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 SUPERFAMILY SSF53613 7 331 2.03E-72 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2143 de133d20230bb51463b6a3613fa84322 647 Gene3D G3DSA:2.20.150.10 16 111 1.7E-91 T 15-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 SMART SM00846 3 150 3.5E-95 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 SUPERFAMILY SSF51735 3 166 1.68E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-46 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-46 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-46 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-46 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.6E-46 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 SUPERFAMILY SSF55347 149 312 2.96E-78 T 15-10-2018 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 Gene3D G3DSA:3.40.50.720 4 326 1.2E-154 T 15-10-2018 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 5.1E-70 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 Gene3D G3DSA:3.30.360.10 149 314 1.2E-154 T 15-10-2018 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 PIRSF PIRSF000149 1 331 1.5E-133 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.7E-137 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0840 05e32262db6ebfb23c54c1a12533a8aa 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.9E-40 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0450 7d8c56c7bd73321600d22a6f2ccc83ed 235 SUPERFAMILY SSF53850 25 233 1.45E-31 T 15-10-2018 VIBNI_A0450 7d8c56c7bd73321600d22a6f2ccc83ed 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 233 1.9E-22 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0450 7d8c56c7bd73321600d22a6f2ccc83ed 235 Gene3D G3DSA:3.40.190.10 30 233 1.1E-27 T 15-10-2018 VIBNI_A0450 7d8c56c7bd73321600d22a6f2ccc83ed 235 Gene3D G3DSA:3.40.190.10 107 204 1.1E-27 T 15-10-2018 VIBNI_A2415 60eb057c29604edd86e5f4bc2f0292f8 429 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 87 419 2.0E-98 T 15-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VIBNI_A2415 60eb057c29604edd86e5f4bc2f0292f8 429 Pfam PF00425 chorismate binding enzyme 159 411 8.6E-69 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VIBNI_A2415 60eb057c29604edd86e5f4bc2f0292f8 429 Gene3D G3DSA:3.60.120.10 4 421 4.0E-119 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A2415 60eb057c29604edd86e5f4bc2f0292f8 429 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 421 28.658 T 15-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VIBNI_A2415 60eb057c29604edd86e5f4bc2f0292f8 429 SUPERFAMILY SSF56322 28 419 5.36E-89 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A1443 8b7528f32dd5b3446c8732b8766f354b 159 SUPERFAMILY SSF141452 4 157 1.83E-35 T 15-10-2018 IPR036624 Hcp1-like superfamily VIBNI_A1443 8b7528f32dd5b3446c8732b8766f354b 159 Gene3D G3DSA:2.30.110.20 2 157 8.5E-34 T 15-10-2018 IPR036624 Hcp1-like superfamily VIBNI_A1443 8b7528f32dd5b3446c8732b8766f354b 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.1E-28 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 Pfam PF07729 FCD domain 93 215 1.3E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 SUPERFAMILY SSF46785 16 87 1.15E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 SMART SM00895 93 216 3.7E-20 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 SMART SM00345 25 83 2.6E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 SUPERFAMILY SSF48008 89 220 3.4E-26 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 Gene3D G3DSA:1.10.10.10 8 84 1.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 6.8E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1441 2c3e98aa494a148f6a3dac0f42a4275e 244 Gene3D G3DSA:1.20.120.530 86 221 1.0E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1102 812107b33ecb5cb28dd3661b108f8d87 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 216 1.7E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1102 812107b33ecb5cb28dd3661b108f8d87 225 Gene3D G3DSA:1.10.3720.10 1 218 2.9E-49 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1102 812107b33ecb5cb28dd3661b108f8d87 225 SUPERFAMILY SSF161098 11 203 2.09E-41 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1102 812107b33ecb5cb28dd3661b108f8d87 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 7.3E-23 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 2.1E-109 T 15-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 15-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 SUPERFAMILY SSF55486 203 449 2.01E-74 T 15-10-2018 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Gene3D G3DSA:1.25.50.10 545 867 6.1E-114 T 15-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 SUPERFAMILY SSF63737 3 192 4.32E-47 T 15-10-2018 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Gene3D G3DSA:1.10.1740.60 194 278 1.3E-39 T 15-10-2018 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Pfam PF01433 Peptidase family M1 domain 207 435 1.1E-58 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Gene3D G3DSA:1.10.390.10 279 442 2.4E-65 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 3.2E-9 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 3.2E-9 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 3.2E-9 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 3.2E-9 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 3.2E-9 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Gene3D G3DSA:2.60.40.1730 15 193 4.2E-69 T 15-10-2018 VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Gene3D G3DSA:2.60.40.1840 443 544 1.5E-35 T 15-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VIBNI_A1790 eaaf33defa48af5558468527b4422133 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 8.5E-32 T 15-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VIBNI_A0508 b8e3f2190d34634ea69e70fd0f38cca3 183 Gene3D G3DSA:1.10.357.10 6 172 5.1E-27 T 15-10-2018 VIBNI_A0508 b8e3f2190d34634ea69e70fd0f38cca3 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 9.1E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0508 b8e3f2190d34634ea69e70fd0f38cca3 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 6.2E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0508 b8e3f2190d34634ea69e70fd0f38cca3 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.2E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0508 b8e3f2190d34634ea69e70fd0f38cca3 183 SUPERFAMILY SSF46689 17 76 4.72E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 Gene3D G3DSA:1.10.3130.10 2 146 6.1E-37 T 15-10-2018 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 PIRSF PIRSF000441 79 255 1.9E-50 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 Pfam PF06426 Serine acetyltransferase, N-terminal 13 117 4.5E-22 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 206 234 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 198 230 1.0E-4 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 Gene3D G3DSA:2.160.10.10 147 255 1.5E-29 T 15-10-2018 VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 SUPERFAMILY SSF51161 11 248 1.18E-48 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A0853 bab5b1601dd60fa74f213df757d1ba59 255 SMART SM00971 13 117 7.3E-19 T 15-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 SUPERFAMILY SSF53613 1 305 9.2E-80 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 Gene3D G3DSA:3.40.1190.20 1 306 7.2E-94 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 PRINTS PR00990 Ribokinase signature 22 41 5.0E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 PRINTS PR00990 Ribokinase signature 214 225 5.0E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B1118 269149b3dd3d6ae1ad63d9219332d4ca 306 Pfam PF00294 pfkB family carbohydrate kinase 1 297 3.1E-68 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 SUPERFAMILY SSF58104 366 670 1.96E-76 T 15-10-2018 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 636 1.9E-49 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 SMART SM00283 408 669 2.4E-76 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 SMART SM00304 463 519 57.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 SMART SM00304 340 393 1.3E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 533 1.6E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 564 1.6E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 317 337 1.6E-21 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1778 eaf7ff7846f44b264f5461be5f412445 670 Gene3D G3DSA:1.10.287.950 340 670 9.1E-76 T 15-10-2018 VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 Gene3D G3DSA:1.10.1660.10 1 125 4.0E-31 T 15-10-2018 VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.4E-54 T 15-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 Pfam PF00376 MerR family regulatory protein 2 39 7.5E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 SUPERFAMILY SSF46955 1 126 1.61E-34 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 Pfam PF09278 MerR, DNA binding 45 107 1.3E-17 T 15-10-2018 IPR015358 Transcription regulator MerR, DNA binding VIBNI_A2616 6a54e586e4f205f6afe47017b2553d6e 131 SMART SM00422 1 70 1.6E-23 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 SUPERFAMILY SSF69349 443 655 1.33E-39 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 Gene3D G3DSA:2.40.50.230 358 457 1.4E-41 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 Gene3D G3DSA:2.30.110.50 13 332 2.9E-86 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 SUPERFAMILY SSF69255 365 452 1.28E-33 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 SUPERFAMILY SSF69279 189 366 1.7E-41 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 Gene3D G3DSA:3.55.50.10 100 191 2.9E-86 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 Pfam PF05954 Phage late control gene D protein (GPD) 37 330 5.8E-74 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 519 1.1E-179 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 SUPERFAMILY SSF69279 6 187 1.7E-51 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 Gene3D G3DSA:3.30.1920.30 224 287 2.9E-86 T 15-10-2018 VIBNI_B0335 6ba3e676521fd25efbe6b6e93a7e52e7 682 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 20 504 1.1E-129 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VIBNI_A0648 73516d57a8b57aafb4566a92b960e71c 417 Gene3D G3DSA:3.40.50.1820 21 416 4.1E-112 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0648 73516d57a8b57aafb4566a92b960e71c 417 SUPERFAMILY SSF53474 50 380 4.82E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0648 73516d57a8b57aafb4566a92b960e71c 417 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 8 416 5.5E-209 T 15-10-2018 IPR010520 UPF0255 family VIBNI_A0648 73516d57a8b57aafb4566a92b960e71c 417 Hamap MF_01063 Esterase FrsA [frsA]. 7 417 54.062 T 15-10-2018 IPR010520 UPF0255 family VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 91 113 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 352 374 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 183 201 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 411 431 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 211 230 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 PRINTS PR00175 Sodium/alanine symporter signature 306 324 6.0E-51 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 440 6.1E-158 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A1864 c5c02548a93787900399360791f76235 458 Pfam PF01235 Sodium:alanine symporter family 54 448 2.9E-140 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_B0842 5baf578efcc8f194b3bc2f63c1f9f67c 268 SMART SM00342 177 259 5.5E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0842 5baf578efcc8f194b3bc2f63c1f9f67c 268 Pfam PF12833 Helix-turn-helix domain 183 259 1.3E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0842 5baf578efcc8f194b3bc2f63c1f9f67c 268 SUPERFAMILY SSF51182 13 186 1.69E-9 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0842 5baf578efcc8f194b3bc2f63c1f9f67c 268 SUPERFAMILY SSF46689 214 263 5.38E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0842 5baf578efcc8f194b3bc2f63c1f9f67c 268 Gene3D G3DSA:1.10.10.60 157 267 7.1E-22 T 15-10-2018 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 SUPERFAMILY SSF46689 233 282 2.47E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 SUPERFAMILY SSF46689 180 231 2.66E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 6.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 6.2E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 SMART SM00342 197 280 1.0E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 Pfam PF12833 Helix-turn-helix domain 204 281 7.8E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 SUPERFAMILY SSF51215 32 163 1.57E-10 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 Gene3D G3DSA:1.10.10.60 175 283 2.8E-27 T 15-10-2018 VIBNI_B0900 b7c29eb3374b82e88b908d7bac3e81ef 283 Pfam PF12852 Cupin 3 165 3.0E-35 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VIBNI_B2075 c738f48c2afa49f77a9af3439e7f77b6 615 SUPERFAMILY SSF55486 4 551 4.84E-73 T 15-10-2018 VIBNI_B2075 c738f48c2afa49f77a9af3439e7f77b6 615 Gene3D G3DSA:1.10.1370.30 26 306 1.4E-8 T 15-10-2018 VIBNI_B2075 c738f48c2afa49f77a9af3439e7f77b6 615 Gene3D G3DSA:1.10.1370.20 321 501 1.7E-9 T 15-10-2018 VIBNI_B2075 c738f48c2afa49f77a9af3439e7f77b6 615 Pfam PF01432 Peptidase family M3 284 490 2.1E-15 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 167 294 2.8E-46 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 SUPERFAMILY SSF64383 167 299 9.15E-50 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 Gene3D G3DSA:3.30.1400.10 163 301 8.9E-50 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 297 23.393 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 SMART SM00771 165 295 1.6E-69 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 295 6.7E-88 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VIBNI_A2623 c1cdde4ea882f985db271644ddf8365a 301 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 168 300 2.0E-63 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VIBNI_A1433 9e5e51e06bb21dc29177c04313c049c6 261 SMART SM00332 3 235 1.3E-24 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1433 9e5e51e06bb21dc29177c04313c049c6 261 SMART SM00331 11 237 2.8E-30 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1433 9e5e51e06bb21dc29177c04313c049c6 261 Pfam PF13672 Protein phosphatase 2C 20 204 3.8E-17 T 15-10-2018 VIBNI_A1433 9e5e51e06bb21dc29177c04313c049c6 261 Gene3D G3DSA:3.60.40.10 1 239 7.4E-60 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1433 9e5e51e06bb21dc29177c04313c049c6 261 SUPERFAMILY SSF81606 8 236 3.53E-60 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_B0418 51ca83af0a8e96145249e0603d5eb95f 340 Pfam PF00248 Aldo/keto reductase family 19 327 2.8E-43 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain VIBNI_B0418 51ca83af0a8e96145249e0603d5eb95f 340 Gene3D G3DSA:3.20.20.100 5 329 2.5E-65 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_B0418 51ca83af0a8e96145249e0603d5eb95f 340 SUPERFAMILY SSF51430 7 327 2.75E-62 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 SUPERFAMILY SSF51735 3 261 5.12E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 Gene3D G3DSA:3.40.50.720 1 262 5.7E-79 T 15-10-2018 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 197 432 4.0E-63 T 15-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 PRINTS PR00084 Mannitol dehydrogenase signature 199 212 7.5E-16 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 PRINTS PR00084 Mannitol dehydrogenase signature 229 244 7.5E-16 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 PRINTS PR00084 Mannitol dehydrogenase signature 5 15 7.5E-16 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 PRINTS PR00084 Mannitol dehydrogenase signature 159 172 7.5E-16 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 Gene3D G3DSA:1.10.1040.10 264 456 1.2E-47 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 199 211 - T 15-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 4 168 5.9E-22 T 15-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1685 e7b7a5b7dd1fc1f7cf773feada5258f0 460 SUPERFAMILY SSF48179 265 445 2.79E-42 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 Gene3D G3DSA:2.130.10.120 72 396 3.0E-150 T 15-10-2018 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 20 390 8.7E-38 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 Pfam PF00326 Prolyl oligopeptidase family 450 663 1.2E-50 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 594 616 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 576 591 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 435 453 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 518 538 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 508 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 461 485 4.1E-36 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 SUPERFAMILY SSF50993 18 388 1.73E-35 T 15-10-2018 VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 Gene3D G3DSA:3.40.50.1820 22 658 3.0E-150 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1732 e714b3243339aede0e9bf7d88a7f56d8 668 SUPERFAMILY SSF53474 415 643 2.93E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0755 a1455736de66edde178631aafd0fdf4e 161 SUPERFAMILY SSF82093 30 142 4.71E-38 T 15-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VIBNI_A0755 a1455736de66edde178631aafd0fdf4e 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.029 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VIBNI_A0755 a1455736de66edde178631aafd0fdf4e 161 Pfam PF03100 CcmE 4 136 2.1E-43 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VIBNI_A0755 a1455736de66edde178631aafd0fdf4e 161 Gene3D G3DSA:2.40.50.140 30 142 7.7E-39 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 SUPERFAMILY SSF53706 38 698 7.59E-201 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 15-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.9E-26 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 7.8E-90 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Gene3D G3DSA:2.40.40.20 705 828 2.1E-45 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.404 T 15-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 15-10-2018 VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 SUPERFAMILY SSF50692 688 828 7.69E-42 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VIBNI_B1300 08aee5c979cbf1d52addcf6a9e79f8ff 829 SMART SM00926 41 95 1.9E-13 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A0051 97b567d0512cb0277196587c6aefa4e7 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.2E-45 T 15-10-2018 IPR025218 Domain of unknown function DUF4426 VIBNI_A0051 97b567d0512cb0277196587c6aefa4e7 143 Gene3D G3DSA:2.60.40.3340 15 143 3.8E-38 T 15-10-2018 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Pfam PF11761 Cobalamin biosynthesis central region 137 238 4.5E-11 T 15-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 SUPERFAMILY SSF52833 412 475 3.35E-6 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Gene3D G3DSA:3.40.50.11220 1 126 3.4E-27 T 15-10-2018 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 SUPERFAMILY SSF159672 1 247 6.41E-55 T 15-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Gene3D G3DSA:3.40.30.10 413 522 6.3E-9 T 15-10-2018 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Pfam PF11760 Cobalamin synthesis G N-terminal 52 131 4.1E-32 T 15-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Pfam PF01890 Cobalamin synthesis G C-terminus 241 361 5.8E-31 T 15-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 SUPERFAMILY SSF159664 234 365 7.46E-35 T 15-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 VIBNI_A0071 8eb6b1f0a6b66ac714e0ddb46222329f 534 Gene3D G3DSA:3.30.420.180 230 371 1.4E-34 T 15-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 SUPERFAMILY SSF109604 184 403 5.65E-39 T 15-10-2018 VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 SMART SM00052 1 198 0.0036 T 15-10-2018 IPR001633 EAL domain VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 PIRSF PIRSF003180 1 407 5.8E-161 T 15-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 Gene3D G3DSA:3.20.20.450 3 202 2.7E-18 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 SUPERFAMILY SSF141868 4 198 2.48E-28 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 Pfam PF00563 EAL domain 75 193 1.0E-13 T 15-10-2018 IPR001633 EAL domain VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 Pfam PF08668 HDOD domain 207 323 9.4E-11 T 15-10-2018 IPR013976 Metal-dependent hydrolase HDOD VIBNI_A3755 10b2d359a5253c2d83141a0e5fc7ce3a 422 Gene3D G3DSA:1.10.3210.10 203 378 2.5E-18 T 15-10-2018 VIBNI_B0225 eee59664ec58e6fc09e9fe0eddc3d2b3 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 318 1.6E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0225 eee59664ec58e6fc09e9fe0eddc3d2b3 343 Gene3D G3DSA:1.10.3720.10 109 336 6.4E-38 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0225 eee59664ec58e6fc09e9fe0eddc3d2b3 343 SUPERFAMILY SSF161098 104 326 3.27E-40 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B2036 8ea021bb8268c87a3698ccd82b1cb272 346 Gene3D G3DSA:3.40.50.2300 43 294 9.5E-48 T 15-10-2018 VIBNI_B2036 8ea021bb8268c87a3698ccd82b1cb272 346 Gene3D G3DSA:3.40.50.2300 137 270 9.5E-48 T 15-10-2018 VIBNI_B2036 8ea021bb8268c87a3698ccd82b1cb272 346 Pfam PF13407 Periplasmic binding protein domain 34 290 1.6E-33 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B2036 8ea021bb8268c87a3698ccd82b1cb272 346 SUPERFAMILY SSF53822 32 312 1.48E-50 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1862 433e09121a7a45d17cfaa49c4a3146c3 408 Pfam PF03616 Sodium/glutamate symporter 12 376 3.4E-115 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VIBNI_B1862 433e09121a7a45d17cfaa49c4a3146c3 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 8 407 23.516 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VIBNI_B1862 433e09121a7a45d17cfaa49c4a3146c3 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 406 1.2E-130 T 15-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 PIRSF PIRSF000090 1 257 3.1E-74 T 15-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 SMART SM00893 23 219 2.0E-55 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 Gene3D G3DSA:3.40.50.620 1 256 9.5E-77 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 SUPERFAMILY SSF52402 1 250 1.26E-72 T 15-10-2018 VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 163 183 - T 15-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VIBNI_A0955 af5af731a4b1324fee6da9271f48d00d 257 Pfam PF01012 Electron transfer flavoprotein domain 31 213 1.5E-39 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B1760 b51b47a571cac25d754a607311bbe029 130 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.0E-39 T 15-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VIBNI_B1760 b51b47a571cac25d754a607311bbe029 130 PIRSF PIRSF028770 1 127 1.7E-66 T 15-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VIBNI_B0625 24748788281ccc16d1a03fea9af645ae 436 SUPERFAMILY SSF51679 5 433 7.98E-97 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VIBNI_B0625 24748788281ccc16d1a03fea9af645ae 436 Gene3D G3DSA:3.20.20.30 1 436 3.3E-113 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VIBNI_B0625 24748788281ccc16d1a03fea9af645ae 436 PIRSF PIRSF000337 2 436 7.0E-127 T 15-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 VIBNI_B0625 24748788281ccc16d1a03fea9af645ae 436 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 18 431 4.8E-116 T 15-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 VIBNI_B0625 24748788281ccc16d1a03fea9af645ae 436 Pfam PF00296 Luciferase-like monooxygenase 22 387 6.2E-52 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 Pfam PF05199 GMC oxidoreductase 414 534 1.1E-21 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 Gene3D G3DSA:3.50.50.60 445 543 1.6E-17 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 Gene3D G3DSA:3.50.50.60 218 305 9.3E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 Pfam PF00732 GMC oxidoreductase 12 315 1.1E-12 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 5.7E-5 T 15-10-2018 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 5.7E-5 T 15-10-2018 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 SUPERFAMILY SSF54373 384 484 1.65E-12 T 15-10-2018 VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 Gene3D G3DSA:3.50.50.60 5 170 2.2E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1223 f0538237d9c37b1e084410a3c62553fc 549 SUPERFAMILY SSF51905 9 543 1.02E-61 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2837 be94d021666738331347a45ee45809f3 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.7E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 SUPERFAMILY SSF54913 1 112 1.78E-45 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VIBNI_A2837 be94d021666738331347a45ee45809f3 112 PIRSF PIRSF039144 1 112 7.8E-56 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 Gene3D G3DSA:3.30.70.120 1 112 8.1E-47 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_A2837 be94d021666738331347a45ee45809f3 112 PRINTS PR00340 P-II protein signature 23 41 7.0E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 PRINTS PR00340 P-II protein signature 2 17 7.0E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 PRINTS PR00340 P-II protein signature 83 103 7.0E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 PRINTS PR00340 P-II protein signature 52 75 7.0E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2837 be94d021666738331347a45ee45809f3 112 SMART SM00938 4 105 7.3E-69 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 Pfam PF01614 Bacterial transcriptional regulator 126 251 3.2E-40 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 SUPERFAMILY SSF46785 10 81 1.3E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 SMART SM00346 10 99 1.0E-29 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 Gene3D G3DSA:3.30.450.40 84 262 1.2E-59 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 SUPERFAMILY SSF55781 74 254 6.54E-50 T 15-10-2018 VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.7E-13 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B1702 b632b0e87d21cf5456f117167e2e7bdb 262 Gene3D G3DSA:1.10.10.10 8 83 1.2E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0491 68ba4e44a7f6529ac11eed7e8efc81e1 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VIBNI_A0491 68ba4e44a7f6529ac11eed7e8efc81e1 258 PIRSF PIRSF005902 1 258 7.4E-65 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_A0491 68ba4e44a7f6529ac11eed7e8efc81e1 258 SUPERFAMILY SSF51556 4 256 7.43E-72 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A0491 68ba4e44a7f6529ac11eed7e8efc81e1 258 Gene3D G3DSA:3.20.20.140 1 257 3.8E-81 T 15-10-2018 VIBNI_A0491 68ba4e44a7f6529ac11eed7e8efc81e1 258 Pfam PF01026 TatD related DNase 5 254 2.9E-62 T 15-10-2018 IPR001130 TatD family GO:0016788 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PIRSF PIRSF001111 1 292 6.1E-126 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 Pfam PF00857 Isochorismatase family 32 197 2.9E-32 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 Pfam PF00550 Phosphopantetheine attachment site 221 280 8.0E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0615 a23502058377e615ca8eae8508726286 297 SUPERFAMILY SSF47336 218 290 5.1E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0615 a23502058377e615ca8eae8508726286 297 Gene3D G3DSA:3.40.50.850 1 209 2.8E-74 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 110 132 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 2 14 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 184 201 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 166 184 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 63 80 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 PRINTS PR01398 Isochorismatase signature 80 99 4.0E-48 T 15-10-2018 IPR016291 Isochorismatase GO:0008908 VIBNI_B0615 a23502058377e615ca8eae8508726286 297 Gene3D G3DSA:1.10.1200.10 210 289 2.7E-20 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0615 a23502058377e615ca8eae8508726286 297 SUPERFAMILY SSF52499 1 210 1.83E-59 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_A3297 1dafc1d15fa4240f33bd2473ea4bcae8 211 SMART SM00479 29 203 6.6E-22 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A3297 1dafc1d15fa4240f33bd2473ea4bcae8 211 Gene3D G3DSA:3.30.420.10 23 200 2.5E-33 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A3297 1dafc1d15fa4240f33bd2473ea4bcae8 211 Pfam PF00929 Exonuclease 31 193 7.2E-20 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A3297 1dafc1d15fa4240f33bd2473ea4bcae8 211 SUPERFAMILY SSF53098 27 198 9.59E-34 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 SUPERFAMILY SSF51735 2 242 8.42E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 Pfam PF00106 short chain dehydrogenase 3 199 5.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.5E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.5E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.5E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1671 9c59b0216ccd69ecb46585ea5f37a625 268 Gene3D G3DSA:3.40.50.720 1 266 1.9E-46 T 15-10-2018 VIBNI_B0108 6f872be53ab9469565a50f28a4fec762 335 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 2.1E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_B0108 6f872be53ab9469565a50f28a4fec762 335 Gene3D G3DSA:3.40.190.10 49 332 4.0E-64 T 15-10-2018 VIBNI_B0108 6f872be53ab9469565a50f28a4fec762 335 Gene3D G3DSA:3.40.190.10 118 232 4.0E-64 T 15-10-2018 VIBNI_B0108 6f872be53ab9469565a50f28a4fec762 335 PIRSF PIRSF027386 3 335 7.3E-92 T 15-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type VIBNI_B0108 6f872be53ab9469565a50f28a4fec762 335 SUPERFAMILY SSF53850 69 333 1.66E-27 T 15-10-2018 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SUPERFAMILY SSF52172 596 720 3.7E-31 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SMART SM00388 352 417 5.7E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Gene3D G3DSA:3.30.565.10 416 581 5.6E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SUPERFAMILY SSF55874 406 575 2.36E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Pfam PF02743 Cache domain 43 245 6.7E-14 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 1.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 1.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 1.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 1.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 417 1.7E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SMART SM00387 464 579 3.0E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 3.3E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Gene3D G3DSA:3.30.450.20 30 206 4.0E-23 T 15-10-2018 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Gene3D G3DSA:3.40.50.2300 592 715 2.7E-33 T 15-10-2018 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Pfam PF00072 Response regulator receiver domain 601 710 4.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SMART SM00448 598 712 2.5E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SUPERFAMILY SSF103190 138 208 3.14E-6 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 Gene3D G3DSA:1.10.287.130 318 415 6.7E-25 T 15-10-2018 VIBNI_A2251 ae5aa010dbba59ab2cdecc2c927400ea 808 SUPERFAMILY SSF47384 338 418 1.0E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 SUPERFAMILY SSF46565 1 110 9.55E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 15-10-2018 IPR018253 DnaJ domain, conserved site VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 5.7E-141 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Gene3D G3DSA:2.10.230.10 141 211 6.5E-26 T 15-10-2018 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Pfam PF00684 DnaJ central domain 149 209 4.0E-15 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 SUPERFAMILY SSF49493 116 269 5.36E-21 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Pfam PF01556 DnaJ C terminal domain 123 335 2.2E-45 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 SUPERFAMILY SSF49493 261 346 4.32E-23 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Gene3D G3DSA:1.10.287.110 1 116 3.8E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 SUPERFAMILY SSF57938 136 212 1.7E-23 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Gene3D G3DSA:2.60.260.20 257 365 2.8E-29 T 15-10-2018 VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 PRINTS PR00625 DnaJ domain signature 25 40 3.8E-32 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 PRINTS PR00625 DnaJ domain signature 7 25 3.8E-32 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 PRINTS PR00625 DnaJ domain signature 42 62 3.8E-32 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 PRINTS PR00625 DnaJ domain signature 62 81 3.8E-32 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Pfam PF00226 DnaJ domain 5 67 1.1E-26 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 SMART SM00271 4 62 8.5E-31 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2722 0956e398b8067947f724dc57af1afe43 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 43.022 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 15-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 Gene3D G3DSA:3.40.50.720 7 281 6.1E-110 T 15-10-2018 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.3E-49 T 15-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 2.6E-21 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 2.6E-21 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 2.6E-21 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 2.6E-21 T 15-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 SUPERFAMILY SSF48179 283 487 1.97E-64 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 Gene3D G3DSA:1.10.1040.10 282 489 4.7E-74 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 5.7E-90 T 15-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VIBNI_B2063 661f5dd1c6c16202bc7c59dc796973df 489 SUPERFAMILY SSF51735 4 281 3.58E-99 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0289 fd4c563a708a7071bdb8546007083a0a 403 Pfam PF01757 Acyltransferase family 15 373 4.7E-17 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 9.7E-137 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 SMART SM01329 7 356 4.0E-202 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 8.5E-165 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.076 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 Gene3D G3DSA:3.40.718.10 1 363 1.4E-156 T 15-10-2018 VIBNI_A2909 4bb578567463f513a9c81c9c79700b0d 363 SUPERFAMILY SSF53659 4 360 1.57E-122 T 15-10-2018 VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 Pfam PF00106 short chain dehydrogenase 3 187 5.0E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 5.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.0E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 SUPERFAMILY SSF51735 3 268 3.38E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.1E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.1E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.1E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.1E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 Gene3D G3DSA:3.40.50.720 2 263 3.5E-59 T 15-10-2018 VIBNI_A2612 1831cb3fd4749f38290ad3c62b3476ab 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 Gene3D G3DSA:2.40.420.20 277 368 1.2E-23 T 15-10-2018 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 284 1.0E-13 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 367 8.9E-87 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 Gene3D G3DSA:2.40.30.170 52 276 1.6E-75 T 15-10-2018 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 SUPERFAMILY SSF111369 48 291 6.93E-65 T 15-10-2018 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 Gene3D G3DSA:2.40.50.100 58 201 1.6E-75 T 15-10-2018 VIBNI_B1321 47ce1aa402f93cf3bf1e442a7280273f 377 Gene3D G3DSA:1.10.287.470 93 166 1.6E-75 T 15-10-2018 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 SUPERFAMILY SSF52540 1 193 4.89E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 2.1E-66 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 PRINTS PR00988 Uridine kinase signature 2 19 9.1E-7 T 15-10-2018 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 PRINTS PR00988 Uridine kinase signature 136 146 9.1E-7 T 15-10-2018 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 Gene3D G3DSA:3.40.50.300 1 200 9.5E-69 T 15-10-2018 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.468 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VIBNI_A0172 5746b4dcae8e8ac54196cd8b96260cd2 201 Pfam PF01121 Dephospho-CoA kinase 4 179 5.9E-73 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 Gene3D G3DSA:1.20.1640.10 91 288 2.7E-10 T 15-10-2018 VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 PRINTS PR01755 Bacterial translocase SecF protein signature 190 208 2.6E-25 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 2.6E-25 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 PRINTS PR01755 Bacterial translocase SecF protein signature 142 156 2.6E-25 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 PRINTS PR01755 Bacterial translocase SecF protein signature 222 237 2.6E-25 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 Pfam PF02355 Protein export membrane protein 97 277 7.7E-58 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 SUPERFAMILY SSF82866 108 277 2.35E-34 T 15-10-2018 VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 102 271 6.0E-49 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 Pfam PF07549 SecD/SecF GG Motif 28 45 1.9E-6 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 285 21.805 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VIBNI_B1846 e71694dd2ef17c11bf4587c077563bad 297 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 274 1.3E-63 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 PIRSF PIRSF003230 2 138 3.5E-47 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 128 2.9E-38 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 SUPERFAMILY SSF54637 7 133 3.66E-42 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 14 31 - T 15-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 Pfam PF03061 Thioesterase superfamily 23 106 1.5E-17 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 9 133 7.0E-51 T 15-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VIBNI_A2261 2624436082c3e2e98bcd27991f324985 140 Gene3D G3DSA:3.10.129.10 4 137 8.7E-44 T 15-10-2018 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 Gene3D G3DSA:3.40.50.150 174 354 1.1E-52 T 15-10-2018 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 PIRSF PIRSF028774 1 358 1.6E-186 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 Gene3D G3DSA:3.30.70.2810 1 75 1.9E-30 T 15-10-2018 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 SUPERFAMILY SSF53335 182 277 4.3E-10 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 Gene3D G3DSA:3.30.2300.20 76 173 9.0E-39 T 15-10-2018 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 353 83.784 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VIBNI_A0683 a31050b0b3ad17357edae116bb5f8e89 359 Pfam PF01728 FtsJ-like methyltransferase 184 258 3.7E-5 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VIBNI_A1134 7221314188dd8759fe7efa17926ad304 306 Pfam PF13407 Periplasmic binding protein domain 27 281 4.8E-47 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1134 7221314188dd8759fe7efa17926ad304 306 SUPERFAMILY SSF53822 24 303 2.36E-67 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1134 7221314188dd8759fe7efa17926ad304 306 Gene3D G3DSA:3.40.50.2300 126 299 1.1E-78 T 15-10-2018 VIBNI_A1134 7221314188dd8759fe7efa17926ad304 306 Gene3D G3DSA:3.40.50.2300 31 288 1.1E-78 T 15-10-2018 VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 SMART SM00028 63 96 0.17 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 SMART SM00028 234 267 20.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 SMART SM00028 97 130 0.0029 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 Gene3D G3DSA:1.25.40.10 22 294 2.5E-78 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 PIRSF PIRSF004654 1 292 2.1E-85 T 15-10-2018 IPR023605 Lipoprotein NlpI VIBNI_A2791 8a517058205f76e5a889d29cb16a8542 299 SUPERFAMILY SSF48452 31 282 3.32E-63 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 SUPERFAMILY SSF53623 14 284 8.77E-85 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 15-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 Pfam PF08245 Mur ligase middle domain 54 197 6.1E-9 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 SUPERFAMILY SSF53244 288 417 2.93E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 PIRSF PIRSF001563 6 421 6.7E-106 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 Gene3D G3DSA:3.90.190.20 288 423 5.8E-33 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 Gene3D G3DSA:3.40.1190.10 1 286 8.9E-92 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0806 306189140ae108c998c1b8a89203e563 424 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 2.6E-102 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 SUPERFAMILY SSF111369 49 263 1.12E-31 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Gene3D G3DSA:1.10.287.470 90 149 1.1E-74 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Gene3D G3DSA:2.40.50.100 56 188 1.1E-74 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Gene3D G3DSA:2.40.420.20 269 350 1.1E-74 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Gene3D G3DSA:2.40.30.170 47 268 1.1E-74 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Pfam PF13437 HlyD family secretion protein 154 250 3.0E-5 T 15-10-2018 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 4.6E-6 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 344 359 4.6E-6 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 Pfam PF13533 Biotin-lipoyl like 60 103 1.4E-14 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VIBNI_A1365 88d80084c1f6c3d654088b012f434c49 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 352 1.5E-72 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 153 6.0E-24 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 SUPERFAMILY SSF54980 402 516 1.29E-26 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Pfam PF00679 Elongation factor G C-terminus 400 481 3.7E-21 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Gene3D G3DSA:3.40.50.300 5 202 5.0E-69 T 15-10-2018 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Gene3D G3DSA:2.40.30.10 203 303 3.5E-34 T 15-10-2018 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Gene3D G3DSA:3.30.70.870 310 594 6.1E-131 T 15-10-2018 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 SUPERFAMILY SSF54980 306 391 6.83E-16 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.1E-296 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Gene3D G3DSA:2.40.50.250 487 603 6.1E-131 T 15-10-2018 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 2.1E-57 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 SUPERFAMILY SSF52540 5 211 4.53E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 SUPERFAMILY SSF50447 155 303 5.41E-34 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Gene3D G3DSA:3.30.70.240 393 486 6.1E-131 T 15-10-2018 VIBNI_A3476 55829e974d63e7f59fc9647231e20dff 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 4.4E-10 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.1E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.1E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 SMART SM00411 1 90 1.8E-45 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.4E-33 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A3315 83f4d546a95af27a88320038bb9657b8 90 SUPERFAMILY SSF47729 1 90 4.27E-33 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_B0069 f986e970b95285896c00298190845664 240 Pfam PF00881 Nitroreductase family 8 159 3.5E-19 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VIBNI_B0069 f986e970b95285896c00298190845664 240 PIRSF PIRSF005426 1 240 2.6E-81 T 15-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VIBNI_B0069 f986e970b95285896c00298190845664 240 Gene3D G3DSA:3.40.109.10 1 240 3.1E-73 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B0069 f986e970b95285896c00298190845664 240 SUPERFAMILY SSF55469 1 239 1.7E-74 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 78 138 6.3E-13 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 2.6E-14 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 SUPERFAMILY SSF56014 148 344 4.06E-58 T 15-10-2018 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Gene3D G3DSA:3.90.480.20 15 416 1.1E-81 T 15-10-2018 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 5.2E-5 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Gene3D G3DSA:3.30.413.10 140 348 1.1E-81 T 15-10-2018 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 SUPERFAMILY SSF56014 430 560 4.97E-33 T 15-10-2018 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 SUPERFAMILY SSF55124 346 422 1.96E-21 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 4.2E-9 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 4.2E-9 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 331 7.1E-45 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Gene3D G3DSA:3.30.413.10 426 569 6.4E-35 T 15-10-2018 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 560 1.8E-281 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 572 57.567 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A3506 11997c00f8fb1d988d6b7f2391f0d161 572 SUPERFAMILY SSF55124 13 144 2.45E-25 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 Pfam PF01274 Malate synthase 16 695 1.0E-154 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 Gene3D G3DSA:3.20.20.360 11 581 6.7E-258 T 15-10-2018 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 Gene3D G3DSA:2.170.170.11 132 262 6.7E-258 T 15-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 9 721 0.0 T 15-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 SUPERFAMILY SSF51645 4 721 2.75E-267 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 335.975 T 15-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1520 ac242ceaf081bb252f87a5968a58fd85 723 Gene3D G3DSA:1.20.1220.12 584 723 1.4E-65 T 15-10-2018 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 Pfam PF02378 Phosphotransferase system, EIIC 16 334 1.5E-79 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 Gene3D G3DSA:3.30.1360.60 417 494 8.2E-24 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 434 451 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 Pfam PF00367 phosphotransferase system, EIIB 423 455 7.8E-12 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 SUPERFAMILY SSF55604 420 492 5.1E-19 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A0269 211c7f7ceb04328ac56bd7f2f8cffa5f 507 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 481 6.6E-18 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 SMART SM00448 3 113 9.7E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 SUPERFAMILY SSF46894 134 235 7.37E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 Gene3D G3DSA:1.10.10.10 127 237 2.1E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 SMART SM00862 158 234 2.6E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 Gene3D G3DSA:3.40.50.2300 1 126 3.2E-33 T 15-10-2018 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 SUPERFAMILY SSF52172 2 128 6.55E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 6.3E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2110 38b486c2263974e233912c3b2159aad6 237 Pfam PF00072 Response regulator receiver domain 5 113 4.0E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 SUPERFAMILY SSF51735 6 255 1.69E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 5.8E-68 T 15-10-2018 VIBNI_A1760 d5c318dbcd93981db827d0778b1c9af3 258 Gene3D G3DSA:3.40.50.720 1 257 5.7E-84 T 15-10-2018 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 11 440 1.4E-132 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Gene3D G3DSA:3.40.50.970 1 173 3.7E-56 T 15-10-2018 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 PIRSF PIRSF004983 2 569 2.3E-169 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 399 2.1E-45 T 15-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 SUPERFAMILY SSF52467 222 370 5.32E-7 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Gene3D G3DSA:3.40.50.1220 216 340 2.5E-38 T 15-10-2018 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 SUPERFAMILY SSF52518 377 561 3.4E-19 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Gene3D G3DSA:3.40.50.970 360 568 8.8E-44 T 15-10-2018 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 SUPERFAMILY SSF52518 6 181 8.03E-33 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 5 565 31.667 T 15-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VIBNI_A2414 7998fe8b33287ae530b08c8f5478e66c 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 173 1.4E-29 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_B0670 e04cc0576437b0ebad9e00563e3ce0ad 155 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 11 127 3.6E-28 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain VIBNI_B0670 e04cc0576437b0ebad9e00563e3ce0ad 155 Gene3D G3DSA:2.40.30.70 1 131 2.5E-36 T 15-10-2018 IPR036414 YaeB, N-terminal domain superfamily VIBNI_B0670 e04cc0576437b0ebad9e00563e3ce0ad 155 Pfam PF01980 Uncharacterised protein family UPF0066 11 123 9.9E-32 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain VIBNI_B0670 e04cc0576437b0ebad9e00563e3ce0ad 155 SUPERFAMILY SSF118196 2 151 8.5E-44 T 15-10-2018 IPR036413 YaeB-like superfamily VIBNI_B0670 e04cc0576437b0ebad9e00563e3ce0ad 155 ProSitePatterns PS01318 TsaA-like domain signature. 69 80 - T 15-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 Gene3D G3DSA:1.20.81.30 59 177 1.1E-31 T 15-10-2018 VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 6.8E-8 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 6.8E-8 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 6.8E-8 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 6.8E-8 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 4.5E-25 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 6.7E-30 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A2997 b98e40e22d39d542451a1db26ab02310 407 Gene3D G3DSA:1.20.81.30 258 371 4.2E-28 T 15-10-2018 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 Gene3D G3DSA:2.40.10.10 25 265 1.5E-59 T 15-10-2018 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 SMART SM00020 32 260 1.5E-59 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 117 131 5.5E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 212 224 5.5E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 60 75 5.5E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 Pfam PF00089 Trypsin 33 260 4.9E-51 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 SUPERFAMILY SSF50494 8 263 8.99E-64 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 Gene3D G3DSA:2.10.10.20 281 335 4.4E-6 T 15-10-2018 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 213 224 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 70 75 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0364 5d5d17c349ba6c0b77d4d8e1fbefb31c 335 SUPERFAMILY SSF51055 284 334 2.35E-7 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3538 536573eba824c295b8d846870f8f70b9 152 SUPERFAMILY SSF46785 10 143 8.26E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3538 536573eba824c295b8d846870f8f70b9 152 Pfam PF01475 Ferric uptake regulator family 19 138 8.9E-19 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VIBNI_A3538 536573eba824c295b8d846870f8f70b9 152 Gene3D G3DSA:1.10.10.10 2 88 7.1E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3538 536573eba824c295b8d846870f8f70b9 152 Gene3D G3DSA:3.30.1490.190 89 148 1.6E-16 T 15-10-2018 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF51004 198 395 5.23E-6 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Pfam PF13205 Bacterial Ig-like domain 409 511 2.1E-13 T 15-10-2018 IPR032812 SbsA, Ig-like domain VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.60.120.1060 1220 1365 1.6E-49 T 15-10-2018 IPR038637 NPCBM domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.60.120.1060 1517 1665 2.6E-44 T 15-10-2018 IPR038637 NPCBM domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.60.40.1220 423 511 4.0E-5 T 15-10-2018 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.130.10.10 689 1013 4.3E-14 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.40.10.500 608 686 4.2E-5 T 15-10-2018 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF46626 955 1035 1.77E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF49785 1221 1365 2.42E-45 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF49785 1520 1666 5.95E-41 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SMART SM00776 1219 1366 3.0E-62 T 15-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SMART SM00776 1519 1666 4.2E-59 T 15-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:2.60.40.10 515 602 1.0E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF51004 598 992 1.29E-29 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Gene3D G3DSA:1.10.760.10 1090 1219 2.4E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Pfam PF08305 NPCBM/NEW2 domain 1222 1364 7.9E-48 T 15-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Pfam PF08305 NPCBM/NEW2 domain 1521 1664 1.1E-45 T 15-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF49299 523 601 4.05E-11 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 Pfam PF00801 PKD domain 524 584 3.1E-8 T 15-10-2018 IPR000601 PKD domain VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SMART SM00089 518 602 7.3E-7 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_B2110 3660694f76d93e8b07c9b410335903ac 1668 SUPERFAMILY SSF46626 1092 1214 1.63E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 Gene3D G3DSA:3.40.50.1860 104 215 3.7E-86 T 15-10-2018 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 8.0E-73 T 15-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 SUPERFAMILY SSF53681 118 229 6.7E-34 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 Gene3D G3DSA:3.40.50.1860 4 221 3.7E-86 T 15-10-2018 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 5.6E-63 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B1517 5f361c352082f54f2dc37c2a07cc4b59 231 SUPERFAMILY SSF53681 1 116 4.58E-36 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A1668 ce6c205a086ecc52f57f68105155524f 252 Pfam PF03942 DTW domain 30 219 9.3E-41 T 15-10-2018 IPR005636 DTW VIBNI_A1668 ce6c205a086ecc52f57f68105155524f 252 SMART SM01144 27 225 6.8E-64 T 15-10-2018 IPR005636 DTW VIBNI_A0615 84cf658611fe119cd051e0b214b192b1 281 Gene3D G3DSA:1.25.40.10 97 269 1.7E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0615 84cf658611fe119cd051e0b214b192b1 281 SMART SM00028 220 253 0.003 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A0615 84cf658611fe119cd051e0b214b192b1 281 SMART SM00028 186 219 49.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A0615 84cf658611fe119cd051e0b214b192b1 281 SUPERFAMILY SSF48452 172 256 3.24E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0615 84cf658611fe119cd051e0b214b192b1 281 Pfam PF13181 Tetratricopeptide repeat 221 252 2.3E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 Pfam PF13444 Acetyltransferase (GNAT) domain 327 428 7.3E-22 T 15-10-2018 VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 Pfam PF01553 Acyltransferase 65 192 3.0E-10 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 SUPERFAMILY SSF55729 309 450 2.6E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 Gene3D G3DSA:3.40.630.30 311 472 6.9E-9 T 15-10-2018 VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 SMART SM00563 74 195 1.1E-13 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A3147 f6bcd4e2b850177dee85866dd519d137 580 SUPERFAMILY SSF69593 37 250 7.06E-16 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 54 66 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 66 86 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 179 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 179 196 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 107 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 156 2.5E-40 T 15-10-2018 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 92 214 3.2E-37 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 6 77 5.1E-14 T 15-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 6 224 1.5E-61 T 15-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Gene3D G3DSA:1.10.287.90 16 87 4.1E-82 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 252 325 2.2E-12 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Gene3D G3DSA:1.10.760.10 232 352 2.8E-31 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 160 208 - T 15-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 SUPERFAMILY SSF49503 84 284 9.13E-53 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 Gene3D G3DSA:2.60.40.420 88 224 4.1E-82 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 SUPERFAMILY SSF81464 4 86 3.43E-25 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1656 6b0aa87433355fd1e814dd4bebee5271 352 SUPERFAMILY SSF46626 234 340 5.44E-25 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1344 a604bb6d7f4e38b04b83b4500e270632 543 SMART SM00862 20 95 2.6E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1344 a604bb6d7f4e38b04b83b4500e270632 543 Gene3D G3DSA:1.10.10.10 1 96 7.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1344 a604bb6d7f4e38b04b83b4500e270632 543 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 94 2.1E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1344 a604bb6d7f4e38b04b83b4500e270632 543 SUPERFAMILY SSF46894 2 95 5.67E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 38 139 1.0E-22 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 Pfam PF13378 Enolase C-terminal domain-like 160 380 1.8E-52 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 SUPERFAMILY SSF54826 1 143 4.1E-36 T 15-10-2018 VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 SMART SM00922 158 261 1.6E-24 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 Gene3D G3DSA:3.30.390.10 3 136 1.6E-184 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 SUPERFAMILY SSF51604 127 387 1.44E-68 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 114 139 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VIBNI_A2748 ee9147e623af02edbfe89f9b43f4cd10 390 Gene3D G3DSA:3.20.20.120 137 384 1.6E-184 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A2445 31d3df67790168654a87f8344db1dffe 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 283 1.1E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2445 31d3df67790168654a87f8344db1dffe 290 SUPERFAMILY SSF161098 12 290 5.79E-66 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2445 31d3df67790168654a87f8344db1dffe 290 Gene3D G3DSA:1.10.3720.10 2 281 3.6E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 Pfam PF00089 Trypsin 32 252 5.5E-49 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 69 74 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 Gene3D G3DSA:2.10.10.20 270 324 2.0E-5 T 15-10-2018 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 204 215 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 203 215 7.6E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 59 74 7.6E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 7.6E-16 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 SMART SM00020 31 252 4.3E-54 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 SUPERFAMILY SSF51055 273 323 6.28E-7 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 SUPERFAMILY SSF50494 26 255 1.1E-62 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0362 3d209f219afdaa85da1f6a96327b9aed 324 Gene3D G3DSA:2.40.10.10 24 257 1.7E-56 T 15-10-2018 VIBNI_B0902 5b081b748efbb9bef807109c1a55e321 158 Pfam PF05981 CreA protein 24 146 7.7E-44 T 15-10-2018 IPR010292 Uncharacterised protein family CreA VIBNI_B0902 5b081b748efbb9bef807109c1a55e321 158 PIRSF PIRSF003174 1 156 2.4E-49 T 15-10-2018 IPR010292 Uncharacterised protein family CreA VIBNI_A1427 0a00a763dd39129840729f971bcf7a64 462 Gene3D G3DSA:2.60.200.20 5 123 2.5E-20 T 15-10-2018 VIBNI_A1427 0a00a763dd39129840729f971bcf7a64 462 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 460 2.8E-104 T 15-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VIBNI_A1427 0a00a763dd39129840729f971bcf7a64 462 SUPERFAMILY SSF49879 29 110 2.49E-20 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VIBNI_A1427 0a00a763dd39129840729f971bcf7a64 462 Pfam PF00498 FHA domain 32 101 1.4E-14 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VIBNI_A1427 0a00a763dd39129840729f971bcf7a64 462 SMART SM00240 31 82 1.5E-6 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VIBNI_A3430 d1982748d3d119a6d75d55e22622031a 375 Gene3D G3DSA:3.40.50.2300 6 125 3.3E-25 T 15-10-2018 VIBNI_A3430 d1982748d3d119a6d75d55e22622031a 375 Gene3D G3DSA:3.40.50.300 133 366 1.2E-34 T 15-10-2018 VIBNI_A3430 d1982748d3d119a6d75d55e22622031a 375 Pfam PF13614 AAA domain 135 299 4.8E-9 T 15-10-2018 IPR025669 AAA domain VIBNI_A3430 d1982748d3d119a6d75d55e22622031a 375 SUPERFAMILY SSF52540 135 351 6.42E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.2E-32 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 536 549 5.2E-32 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 411 426 5.2E-32 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.2E-32 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 571 580 5.2E-32 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Gene3D G3DSA:1.10.730.20 650 939 3.1E-87 T 15-10-2018 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 938 21.532 T 15-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 650 1.0E-217 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 6.2E-294 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 SUPERFAMILY SSF50677 203 413 3.03E-53 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Gene3D G3DSA:3.40.50.620 25 639 4.9E-240 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Pfam PF06827 Zinc finger found in FPG and IleRS 909 935 4.8E-5 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 SUPERFAMILY SSF52374 4 657 5.01E-138 T 15-10-2018 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 SUPERFAMILY SSF47323 662 938 7.29E-75 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Pfam PF08264 Anticodon-binding domain of tRNA 695 851 9.0E-27 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VIBNI_A0359 51872688ee1d1918d0c818558043a291 947 Gene3D G3DSA:3.90.740.10 195 418 4.9E-240 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 SUPERFAMILY SSF51905 21 353 9.62E-33 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 Pfam PF01266 FAD dependent oxidoreductase 24 342 1.7E-48 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 Gene3D G3DSA:3.30.9.10 101 339 5.2E-135 T 15-10-2018 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 97 109 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 35 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 52 64 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 332 338 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 46 4.0E-29 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 400 495 6.6E-13 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 Gene3D G3DSA:3.50.50.60 24 385 5.2E-135 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 SUPERFAMILY SSF54373 245 338 1.31E-7 T 15-10-2018 VIBNI_B1710 25264bb0cd764194fab77bb1e2be3b0f 520 Gene3D G3DSA:1.10.8.870 411 478 1.1E-24 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_A0027 d83d1c759d07b9be8113f710fd459e41 266 SUPERFAMILY SSF161098 69 256 4.06E-33 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0027 d83d1c759d07b9be8113f710fd459e41 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 265 2.3E-94 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 VIBNI_A0027 d83d1c759d07b9be8113f710fd459e41 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 259 5.6E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0027 d83d1c759d07b9be8113f710fd459e41 266 Gene3D G3DSA:1.10.3720.10 67 265 4.3E-32 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 SUPERFAMILY SSF52374 4 671 4.66E-142 T 15-10-2018 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 526 548 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 559 569 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 5.2E-52 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Gene3D G3DSA:3.40.50.620 33 568 0.0 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Gene3D G3DSA:3.10.330.110 569 631 0.0 T 15-10-2018 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 1.5E-26 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 592 3.5E-8 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 621 661 5.5E-8 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Pfam PF08264 Anticodon-binding domain of tRNA 704 823 4.1E-16 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Gene3D G3DSA:3.90.740.10 227 416 0.0 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 861 23.469 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 SUPERFAMILY SSF47323 665 861 2.99E-35 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Gene3D G3DSA:1.10.730.10 8 793 0.0 T 15-10-2018 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 SUPERFAMILY SSF50677 226 417 2.62E-56 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 406 2.4E-78 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 Gene3D G3DSA:3.10.20.590 801 861 2.1E-25 T 15-10-2018 VIBNI_A2708 9b5aa1ce23ed84a9aecc0b6454868aa8 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A3553 9679a8de8a049f55ba9d5b598af40f53 263 SMART SM01150 3 262 2.1E-109 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 VIBNI_A3553 9679a8de8a049f55ba9d5b598af40f53 263 Gene3D G3DSA:3.10.180.50 2 239 9.0E-91 T 15-10-2018 VIBNI_A3553 9679a8de8a049f55ba9d5b598af40f53 263 Pfam PF07063 Domain of unknown function (DUF1338) 134 261 1.7E-27 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 VIBNI_A3553 9679a8de8a049f55ba9d5b598af40f53 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 116 1.5E-19 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 VIBNI_A2640 8a4444a31c8687cbb345bc59779902af 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.0E-49 T 15-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VIBNI_A2640 8a4444a31c8687cbb345bc59779902af 138 Pfam PF00460 Flagella basal body rod protein 7 32 3.6E-7 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VIBNI_A2640 8a4444a31c8687cbb345bc59779902af 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VIBNI_A2640 8a4444a31c8687cbb345bc59779902af 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 1.6E-12 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VIBNI_B1024 c81103a27f1a2ddf646186aff515a2ad 744 Pfam PF16130 Domain of unknown function (DUF4842) 509 733 8.3E-54 T 15-10-2018 IPR032295 Domain of unknown function DUF4842 VIBNI_B1024 c81103a27f1a2ddf646186aff515a2ad 744 TIGRFAM TIGR04456 LruC_dom: LruC domain 473 734 1.7E-72 T 15-10-2018 IPR031025 LruC domain VIBNI_B1024 c81103a27f1a2ddf646186aff515a2ad 744 SUPERFAMILY SSF63825 85 254 1.83E-7 T 15-10-2018 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 Gene3D G3DSA:1.10.10.60 58 113 3.2E-11 T 15-10-2018 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 Gene3D G3DSA:3.20.80.10 128 292 3.4E-24 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 Pfam PF14526 Integron-associated effector binding protein 131 288 1.1E-10 T 15-10-2018 IPR029441 Integron-associated effector binding protein VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 Pfam PF12833 Helix-turn-helix domain 28 105 2.1E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 SUPERFAMILY SSF55136 128 291 5.23E-13 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 SMART SM00342 21 104 2.0E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 Gene3D G3DSA:1.10.10.60 4 57 1.7E-15 T 15-10-2018 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 SMART SM00871 128 289 5.4E-12 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 SUPERFAMILY SSF46689 58 108 1.12E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1692 4b4a5211c028c9d879da18bb30a3ee7e 292 SUPERFAMILY SSF46689 5 55 1.48E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 SUPERFAMILY SSF56796 5 381 3.53E-135 T 15-10-2018 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 4.4E-127 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 Gene3D G3DSA:1.20.1090.10 185 382 1.4E-76 T 15-10-2018 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_B0861 34f325b16c2370f48438a3a009c5a3f0 382 Gene3D G3DSA:3.40.50.1970 2 183 2.9E-57 T 15-10-2018 VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 184 4.8E-78 T 15-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 Gene3D G3DSA:3.40.50.300 176 359 2.5E-47 T 15-10-2018 VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 SMART SM00382 206 352 2.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 Gene3D G3DSA:1.10.8.60 360 443 3.3E-9 T 15-10-2018 VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 Pfam PF00158 Sigma-54 interaction domain 187 353 1.1E-47 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 SUPERFAMILY SSF52540 191 436 7.43E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1842 84fd734b2c61b0f5e9048c7c5e992c6f 534 PIRSF PIRSF037354 1 529 3.2E-238 T 15-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 VIBNI_A3449 f6fb71dc3ebc9ae1758a846b79129582 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.067 T 15-10-2018 IPR019598 Universal stress protein B VIBNI_A3449 f6fb71dc3ebc9ae1758a846b79129582 107 Pfam PF10625 Universal stress protein B (UspB) 1 107 7.9E-50 T 15-10-2018 IPR019598 Universal stress protein B VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Gene3D G3DSA:3.40.120.10 12 218 5.9E-73 T 15-10-2018 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Gene3D G3DSA:3.30.310.50 443 546 2.8E-36 T 15-10-2018 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 SUPERFAMILY SSF55957 433 544 2.27E-20 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Gene3D G3DSA:3.40.120.10 221 318 1.6E-45 T 15-10-2018 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.4E-17 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.3E-38 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 SUPERFAMILY SSF53738 305 446 4.32E-31 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 7.3E-29 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 15-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 5.0E-8 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 SUPERFAMILY SSF53738 29 235 2.59E-50 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 Gene3D G3DSA:3.40.120.10 319 442 2.4E-35 T 15-10-2018 VIBNI_A2572 e8f71ef9ed84d81eb9d5564fdecf9e8c 548 SUPERFAMILY SSF53738 209 317 5.77E-9 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 SUPERFAMILY SSF58104 341 628 2.35E-72 T 15-10-2018 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 9.0E-6 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 522 9.0E-6 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 Gene3D G3DSA:3.30.450.20 85 174 1.1E-15 T 15-10-2018 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 Gene3D G3DSA:1.10.287.950 305 628 9.3E-69 T 15-10-2018 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 Gene3D G3DSA:3.30.450.20 175 258 1.1E-15 T 15-10-2018 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 594 2.3E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1647 6d089f34b5571a9498a3450d398e15af 628 SMART SM00283 366 627 9.4E-72 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 SMART SM00418 15 93 2.7E-30 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-16 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.0E-16 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.0E-16 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.0E-16 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 Gene3D G3DSA:1.10.10.10 1 98 3.2E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 SUPERFAMILY SSF46785 8 96 4.4E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0355 00fb16d1335518603975b279be29f8bb 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 4.5E-18 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 SUPERFAMILY SSF51984 1 89 8.11E-23 T 15-10-2018 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Gene3D G3DSA:3.90.190.20 314 450 5.3E-32 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 SUPERFAMILY SSF53623 97 306 3.27E-53 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Pfam PF08245 Mur ligase middle domain 108 291 2.7E-20 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.861 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Gene3D G3DSA:3.40.50.720 1 90 5.6E-36 T 15-10-2018 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 7.3E-257 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 360 2.1E-11 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 SUPERFAMILY SSF53244 311 448 1.57E-37 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Pfam PF01225 Mur ligase family, catalytic domain 2 101 7.6E-20 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VIBNI_A3059 01734aa8522d290f2f4be9558e9c20a2 454 Gene3D G3DSA:3.40.1190.10 91 313 1.6E-56 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_B0799 c717c4a86df97d7bc6f26bb2365208c6 562 Pfam PF02652 L-lactate permease 7 549 3.7E-105 T 15-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VIBNI_B0799 c717c4a86df97d7bc6f26bb2365208c6 562 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 7.9E-103 T 15-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VIBNI_A3761 297bc9142b67a40605f79f0fdffc7316 208 Pfam PF03942 DTW domain 9 186 7.5E-42 T 15-10-2018 IPR005636 DTW VIBNI_A3761 297bc9142b67a40605f79f0fdffc7316 208 SMART SM01144 6 194 1.0E-42 T 15-10-2018 IPR005636 DTW VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 Gene3D G3DSA:3.40.190.10 163 261 1.1E-58 T 15-10-2018 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 Gene3D G3DSA:3.40.190.10 103 288 1.1E-58 T 15-10-2018 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 SUPERFAMILY SSF53850 92 296 8.69E-41 T 15-10-2018 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 SUPERFAMILY SSF46785 3 85 1.58E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.0E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-38 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0680 cc26c46fa743401c4075b3e84e50afd0 301 Gene3D G3DSA:1.10.10.10 7 95 2.9E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.645 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 Gene3D G3DSA:3.40.390.30 1 154 1.5E-60 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 SUPERFAMILY SSF55486 4 149 6.59E-49 T 15-10-2018 VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.0E-39 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VIBNI_A2704 f2235cdf3ce8ddf950529fc6531e5169 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 6.6E-38 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.714 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 Gene3D G3DSA:3.30.70.260 125 196 3.2E-79 T 15-10-2018 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 Gene3D G3DSA:3.40.50.1360 7 207 3.2E-79 T 15-10-2018 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 SUPERFAMILY SSF100950 1 146 3.49E-47 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.4E-58 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.5E-69 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A0093 a856242215fc19d11b274397ed507a45 218 SUPERFAMILY SSF75445 127 198 2.35E-23 T 15-10-2018 VIBNI_A2154 663147a4725b771077d4785623ac1282 321 Pfam PF13407 Periplasmic binding protein domain 38 285 7.0E-41 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A2154 663147a4725b771077d4785623ac1282 321 Gene3D G3DSA:3.40.50.2300 143 305 7.0E-70 T 15-10-2018 VIBNI_A2154 663147a4725b771077d4785623ac1282 321 Gene3D G3DSA:3.40.50.2300 47 303 7.0E-70 T 15-10-2018 VIBNI_A2154 663147a4725b771077d4785623ac1282 321 SUPERFAMILY SSF53822 39 310 2.63E-45 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 388 6.2E-15 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 SMART SM00267 238 397 2.8E-10 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 Pfam PF00563 EAL domain 417 645 7.7E-57 T 15-10-2018 IPR001633 EAL domain VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 SUPERFAMILY SSF141868 415 660 2.35E-66 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 Gene3D G3DSA:3.20.20.450 407 664 2.2E-68 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 388 2.6E-19 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 SUPERFAMILY SSF55073 254 389 1.57E-22 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 SMART SM00052 407 651 1.7E-62 T 15-10-2018 IPR001633 EAL domain VIBNI_A1050 cfe477f55199c671ce4ed98e95163fa0 669 Gene3D G3DSA:3.30.70.270 235 392 1.4E-25 T 15-10-2018 VIBNI_A3116 45a3e4fd37f18b5ec2d2f8275e296286 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 2.1E-52 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VIBNI_A3116 45a3e4fd37f18b5ec2d2f8275e296286 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VIBNI_A3116 45a3e4fd37f18b5ec2d2f8275e296286 129 SUPERFAMILY SSF55298 2 128 1.05E-44 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3116 45a3e4fd37f18b5ec2d2f8275e296286 129 Gene3D G3DSA:3.30.1330.40 1 129 2.5E-48 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3116 45a3e4fd37f18b5ec2d2f8275e296286 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 7.4E-44 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_A2854 63f8541843cc3aa4d330267b47ff0561 303 Pfam PF00005 ABC transporter 20 164 7.5E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2854 63f8541843cc3aa4d330267b47ff0561 303 SMART SM00382 29 212 6.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2854 63f8541843cc3aa4d330267b47ff0561 303 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2854 63f8541843cc3aa4d330267b47ff0561 303 Gene3D G3DSA:3.40.50.300 1 236 1.4E-64 T 15-10-2018 VIBNI_A2854 63f8541843cc3aa4d330267b47ff0561 303 SUPERFAMILY SSF52540 3 233 6.23E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0280 fcbea98e05421db91692f06764851274 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 15-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VIBNI_B0280 fcbea98e05421db91692f06764851274 461 SUPERFAMILY SSF49503 310 460 3.17E-33 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Gene3D G3DSA:2.60.40.420 309 461 1.9E-37 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Pfam PF07731 Multicopper oxidase 357 458 2.4E-26 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Pfam PF07732 Multicopper oxidase 44 158 2.8E-37 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Pfam PF00394 Multicopper oxidase 165 284 4.1E-9 T 15-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Gene3D G3DSA:2.60.40.420 9 154 7.3E-44 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0280 fcbea98e05421db91692f06764851274 461 SUPERFAMILY SSF49503 160 282 1.37E-16 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0280 fcbea98e05421db91692f06764851274 461 Gene3D G3DSA:2.60.40.420 161 292 7.8E-24 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0280 fcbea98e05421db91692f06764851274 461 SUPERFAMILY SSF49503 31 160 6.04E-37 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A2054 1a3322a78ab7de0d2e91590e593e44a7 377 Gene3D G3DSA:1.10.620.20 2 341 5.1E-144 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VIBNI_A2054 1a3322a78ab7de0d2e91590e593e44a7 377 SUPERFAMILY SSF47240 3 341 2.6E-111 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A2054 1a3322a78ab7de0d2e91590e593e44a7 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 1.3E-48 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_A2054 1a3322a78ab7de0d2e91590e593e44a7 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 15-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VIBNI_B0945 0de5892bc27e1a256947d2a060cc92f0 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VIBNI_B0945 0de5892bc27e1a256947d2a060cc92f0 310 Pfam PF01148 Cytidylyltransferase family 43 307 3.4E-67 T 15-10-2018 VIBNI_A1597 9d3a36647c2dc49ec5995edaeca29d83 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 324 7.9E-26 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1597 9d3a36647c2dc49ec5995edaeca29d83 337 SUPERFAMILY SSF55073 177 327 1.96E-28 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1597 9d3a36647c2dc49ec5995edaeca29d83 337 Gene3D G3DSA:3.30.70.270 170 333 2.1E-34 T 15-10-2018 VIBNI_A1597 9d3a36647c2dc49ec5995edaeca29d83 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 327 7.9E-27 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1597 9d3a36647c2dc49ec5995edaeca29d83 337 SMART SM00267 161 329 1.5E-30 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0667 253412c7da14b30771fa1dba011bf62c 313 Pfam PF00691 OmpA family 194 292 5.0E-17 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A0667 253412c7da14b30771fa1dba011bf62c 313 Gene3D G3DSA:3.30.1330.60 152 300 1.5E-51 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0667 253412c7da14b30771fa1dba011bf62c 313 SUPERFAMILY SSF103088 181 298 1.7E-29 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0667 253412c7da14b30771fa1dba011bf62c 313 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 56 1.3E-17 T 15-10-2018 IPR025713 Motility protein B, N-terminal domain VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 Pfam PF13500 AAA domain 4 211 4.3E-38 T 15-10-2018 VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.133 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.5E-53 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 SUPERFAMILY SSF52540 1 211 1.59E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 PIRSF PIRSF006755 1 228 1.4E-77 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VIBNI_A2315 2a8f39183eea88f71eb1a2e62bba2939 231 Gene3D G3DSA:3.40.50.300 3 224 4.5E-65 T 15-10-2018 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 Gene3D G3DSA:3.40.50.300 179 363 7.6E-64 T 15-10-2018 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 Gene3D G3DSA:1.10.8.60 364 443 4.4E-18 T 15-10-2018 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 SUPERFAMILY SSF46689 407 514 1.04E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 SMART SM00382 213 356 3.3E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 Gene3D G3DSA:1.10.10.60 458 516 1.2E-10 T 15-10-2018 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 Pfam PF00158 Sigma-54 interaction domain 193 359 7.7E-67 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 478 495 2.4E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 495 515 2.4E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 SUPERFAMILY SSF52540 193 435 2.02E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_B0347 fde0bdd2edb63b7ef10a80bf88eecf05 516 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 406 415 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A3031 6bafb57219001766825d00f01ffa0f0a 289 Gene3D G3DSA:3.90.550.10 1 279 9.2E-82 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3031 6bafb57219001766825d00f01ffa0f0a 289 Pfam PF00483 Nucleotidyl transferase 9 265 3.0E-32 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VIBNI_A3031 6bafb57219001766825d00f01ffa0f0a 289 SUPERFAMILY SSF53448 2 270 1.25E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3031 6bafb57219001766825d00f01ffa0f0a 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 6.9E-124 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 529 7.4E-213 T 15-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 SUPERFAMILY SSF81442 23 530 7.33E-194 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 477 3.2E-150 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 Gene3D G3DSA:1.20.210.10 15 531 8.4E-217 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 255 309 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 173 191 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 26 51 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 73 96 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 253 274 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 202 221 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 299 314 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1655 c26300f7d28098e486e41e9cc91adad5 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 6.5E-121 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1375 f0b12f7d5ca473576d72678d088e21bb 244 Pfam PF15575 Immunity protein 49 29 217 5.3E-34 T 15-10-2018 IPR029074 Immunity protein 49 VIBNI_A2551 cea57ab294e61f905dbf05ddac8ca48c 330 Gene3D G3DSA:3.40.50.1980 218 330 1.9E-37 T 15-10-2018 VIBNI_A2551 cea57ab294e61f905dbf05ddac8ca48c 330 SUPERFAMILY SSF53807 22 328 1.57E-69 T 15-10-2018 VIBNI_A2551 cea57ab294e61f905dbf05ddac8ca48c 330 Gene3D G3DSA:3.40.50.1980 139 217 9.8E-18 T 15-10-2018 VIBNI_A2551 cea57ab294e61f905dbf05ddac8ca48c 330 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 320 4.1E-53 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VIBNI_A2551 cea57ab294e61f905dbf05ddac8ca48c 330 Gene3D G3DSA:3.40.50.1980 21 138 5.5E-22 T 15-10-2018 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 Pfam PF03466 LysR substrate binding domain 98 272 5.4E-20 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 Gene3D G3DSA:1.10.10.10 1 94 7.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 66 9.5E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 SUPERFAMILY SSF53850 98 288 3.1E-20 T 15-10-2018 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 Gene3D G3DSA:3.40.190.290 97 287 1.6E-20 T 15-10-2018 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.8E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0652 61324c58200ff829049a4a6148f25473 296 SUPERFAMILY SSF46785 3 90 1.01E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2307 be72d06b1d4d04be63f577f0c071b462 409 Gene3D G3DSA:3.40.50.150 139 409 1.5E-101 T 15-10-2018 VIBNI_A2307 be72d06b1d4d04be63f577f0c071b462 409 PIRSF PIRSF003085 14 409 3.1E-125 T 15-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VIBNI_A2307 be72d06b1d4d04be63f577f0c071b462 409 SUPERFAMILY SSF53335 20 360 2.81E-84 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2307 be72d06b1d4d04be63f577f0c071b462 409 Pfam PF02353 Mycolic acid cyclopropane synthetase 132 401 7.2E-83 T 15-10-2018 VIBNI_B1927 e761d4872e38b19f3a3d9714636e647f 154 Gene3D G3DSA:3.30.530.20 1 154 5.2E-34 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_B1927 e761d4872e38b19f3a3d9714636e647f 154 SUPERFAMILY SSF55961 9 152 1.99E-31 T 15-10-2018 VIBNI_B1927 e761d4872e38b19f3a3d9714636e647f 154 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 152 5.7E-22 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 SUPERFAMILY SSF47090 171 233 4.24E-17 T 15-10-2018 IPR036365 PGBD-like superfamily VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Gene3D G3DSA:3.40.80.10 13 149 6.7E-32 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 SUPERFAMILY SSF47090 232 298 1.1E-15 T 15-10-2018 IPR036365 PGBD-like superfamily VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Gene3D G3DSA:1.10.101.10 165 232 1.6E-19 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Gene3D G3DSA:1.10.101.10 233 304 5.0E-19 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Pfam PF01471 Putative peptidoglycan binding domain 241 295 7.3E-12 T 15-10-2018 IPR002477 Peptidoglycan binding-like VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Pfam PF01471 Putative peptidoglycan binding domain 177 232 2.1E-15 T 15-10-2018 IPR002477 Peptidoglycan binding-like VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 16 134 2.4E-13 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_B1446 415ee6598ece7faf39032ae1294ad643 305 SUPERFAMILY SSF55846 3 140 5.89E-28 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 SUPERFAMILY SSF55486 214 387 1.72E-17 T 15-10-2018 VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 SMART SM00089 747 838 2.7E-19 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 PIRSF PIRSF007519 2 755 2.6E-290 T 15-10-2018 IPR012300 Peptidase M6, InhA VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 Pfam PF00801 PKD domain 773 826 1.6E-11 T 15-10-2018 IPR000601 PKD domain VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 SUPERFAMILY SSF49299 756 836 3.14E-20 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 Pfam PF05547 Immune inhibitor A peptidase M6 114 748 1.7E-252 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 125 442 1.9E-75 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_B1995 d32b714e25b2f2baca969b0bd1f6cb79 918 Gene3D G3DSA:2.60.40.10 753 838 4.3E-29 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0906 703d38f4f1aac849911fc7ac7d0facb5 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 7.3E-138 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VIBNI_A0906 703d38f4f1aac849911fc7ac7d0facb5 350 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 349 27.227 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VIBNI_A0906 703d38f4f1aac849911fc7ac7d0facb5 350 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 3.3E-103 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 Gene3D G3DSA:1.10.10.10 126 224 9.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 SUPERFAMILY SSF46894 133 222 2.1E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 SMART SM00862 147 222 3.4E-10 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 4.6E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 SUPERFAMILY SSF52172 2 120 9.53E-39 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 SMART SM00448 1 111 6.2E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 Pfam PF00072 Response regulator receiver domain 3 112 6.3E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0180 1c8f90189fe78affedb9a2b8c456c6e2 227 Gene3D G3DSA:3.40.50.2300 1 125 1.0E-34 T 15-10-2018 VIBNI_A3713 43d592c77ffcad80295ae718c148dbac 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.7E-33 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VIBNI_A3713 43d592c77ffcad80295ae718c148dbac 228 SUPERFAMILY SSF75217 5 174 3.07E-47 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A3713 43d592c77ffcad80295ae718c148dbac 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.151 T 15-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 VIBNI_A3713 43d592c77ffcad80295ae718c148dbac 228 Gene3D G3DSA:3.40.1280.10 2 190 3.9E-60 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A3713 43d592c77ffcad80295ae718c148dbac 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.9E-26 T 15-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VIBNI_A0794 cc2dc0dc5f49c19d6c74ef6f80032f85 263 SUPERFAMILY SSF52317 2 224 1.1E-62 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0794 cc2dc0dc5f49c19d6c74ef6f80032f85 263 Pfam PF06283 Trehalose utilisation 4 220 1.7E-32 T 15-10-2018 IPR029010 ThuA-like domain VIBNI_A0794 cc2dc0dc5f49c19d6c74ef6f80032f85 263 Gene3D G3DSA:3.40.50.880 1 247 3.8E-104 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0794 cc2dc0dc5f49c19d6c74ef6f80032f85 263 PIRSF PIRSF030013 1 250 3.2E-116 T 15-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote VIBNI_B2051 567f921f5ae690075ef03a066f865f56 308 SUPERFAMILY SSF53613 1 304 1.55E-67 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B2051 567f921f5ae690075ef03a066f865f56 308 Pfam PF00294 pfkB family carbohydrate kinase 1 305 5.3E-58 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B2051 567f921f5ae690075ef03a066f865f56 308 Gene3D G3DSA:3.40.1190.20 1 308 1.6E-73 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Pfam PF07660 Secretin and TonB N terminus short domain 174 222 7.8E-8 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 PRINTS PR00811 Bacterial general secretion pathway protein D signature 313 323 2.0E-20 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 PRINTS PR00811 Bacterial general secretion pathway protein D signature 539 557 2.0E-20 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 2.0E-20 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 576 2.0E-20 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 436 2.0E-20 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Pfam PF00263 Bacterial type II and III secretion system protein 416 574 1.3E-45 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Gene3D G3DSA:3.30.1370.120 246 309 2.3E-10 T 15-10-2018 IPR038591 NolW-like superfamily VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Gene3D G3DSA:3.55.50.30 134 245 1.5E-37 T 15-10-2018 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 SMART SM00965 174 222 3.2E-10 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Gene3D G3DSA:2.60.40.3470 19 133 2.9E-13 T 15-10-2018 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 520 553 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 Pfam PF03958 Bacterial type II/III secretion system short domain 248 313 1.7E-12 T 15-10-2018 IPR005644 NolW-like VIBNI_A3581 2b76796cd8a29c7aa4bc7cb5c9e4d8f7 576 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 149 574 4.4E-159 T 15-10-2018 IPR013355 Type IV pilus secretin PilQ VIBNI_A1378 cb6cfac4345b71f08c5315c96fe6ccaf 315 SUPERFAMILY SSF53850 29 308 2.94E-47 T 15-10-2018 VIBNI_A1378 cb6cfac4345b71f08c5315c96fe6ccaf 315 Gene3D G3DSA:3.40.190.10 109 208 1.0E-71 T 15-10-2018 VIBNI_A1378 cb6cfac4345b71f08c5315c96fe6ccaf 315 Pfam PF09084 NMT1/THI5 like 37 247 4.9E-67 T 15-10-2018 IPR015168 SsuA/THI5-like VIBNI_A1378 cb6cfac4345b71f08c5315c96fe6ccaf 315 Gene3D G3DSA:3.40.190.10 27 302 1.0E-71 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Gene3D G3DSA:3.30.559.30 814 1052 8.4E-74 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Pfam PF00550 Phosphopantetheine attachment site 107 169 1.5E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Gene3D G3DSA:3.30.559.10 175 346 1.4E-32 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 SUPERFAMILY SSF47336 101 169 4.45E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Pfam PF00668 Condensation domain 633 1037 9.5E-54 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Pfam PF00668 Condensation domain 184 599 8.1E-44 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Gene3D G3DSA:3.30.559.30 351 602 5.4E-30 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Gene3D G3DSA:3.30.559.10 637 998 8.4E-74 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 SUPERFAMILY SSF52777 631 828 4.45E-33 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 SUPERFAMILY SSF52777 188 360 9.12E-25 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 Gene3D G3DSA:1.10.1200.10 103 174 6.4E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 SUPERFAMILY SSF52777 376 571 2.0E-13 T 15-10-2018 VIBNI_B0695 7979f3b4fbd0c40f3d49e0623dae9b90 1063 SUPERFAMILY SSF52777 816 1048 3.56E-31 T 15-10-2018 VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.2E-9 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 Gene3D G3DSA:3.40.50.300 2 241 4.7E-72 T 15-10-2018 VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 SMART SM00382 28 222 1.1E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 Pfam PF00005 ABC transporter 20 166 5.9E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 SUPERFAMILY SSF52540 4 237 1.12E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2952 a7aa09bd8b4d7bece6118ba7dae8a778 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 9.6E-127 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 Gene3D G3DSA:3.40.50.10990 206 368 1.6E-31 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.92 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 Gene3D G3DSA:3.90.870.10 1 205 1.9E-88 T 15-10-2018 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 PIRSF PIRSF001259 1 369 2.5E-130 T 15-10-2018 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 1.1E-84 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.3E-75 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 SUPERFAMILY SSF55821 3 202 1.44E-86 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 SUPERFAMILY SSF142695 205 367 6.93E-48 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A0655 74fde0df6b86d13f4cecbffa6ecfec3c 369 Pfam PF00925 GTP cyclohydrolase II 207 367 5.0E-40 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 Gene3D G3DSA:3.40.50.1400 163 301 8.2E-94 T 15-10-2018 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 TIGRFAM TIGR00109 hemH: ferrochelatase 4 318 6.5E-107 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.036 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 Pfam PF00762 Ferrochelatase 6 317 4.7E-109 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 Gene3D G3DSA:3.40.50.1400 8 317 8.2E-94 T 15-10-2018 VIBNI_A2598 ebbf0f6d08cf46bdbd04303b856500e8 321 SUPERFAMILY SSF53800 4 320 3.4E-103 T 15-10-2018 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Gene3D G3DSA:1.25.60.10 8 134 1.4E-18 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SUPERFAMILY SSF54631 138 278 3.54E-29 T 15-10-2018 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Gene3D G3DSA:3.10.580.10 135 262 2.4E-37 T 15-10-2018 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SUPERFAMILY SSF161093 280 450 1.7E-43 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SMART SM00924 36 139 1.7E-34 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SUPERFAMILY SSF158791 11 136 2.22E-29 T 15-10-2018 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Gene3D G3DSA:1.10.357.20 277 451 5.7E-45 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Pfam PF00571 CBS domain 139 196 7.1E-7 T 15-10-2018 IPR000644 CBS domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Pfam PF00571 CBS domain 215 257 2.7E-5 T 15-10-2018 IPR000644 CBS domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 9.6E-88 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.4E-25 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SMART SM00116 212 258 0.0061 T 15-10-2018 IPR000644 CBS domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 SMART SM00116 146 199 36.0 T 15-10-2018 IPR000644 CBS domain VIBNI_A2946 2b264e267de23e774e83e5dc45638dda 452 Pfam PF01769 Divalent cation transporter 323 444 6.3E-23 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 SMART SM00421 160 217 4.0E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 Pfam PF00072 Response regulator receiver domain 84 131 1.1E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 6.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 6.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 6.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 SUPERFAMILY SSF46894 151 223 9.52E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 Gene3D G3DSA:3.40.50.12740 80 223 1.5E-38 T 15-10-2018 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 2.2E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A2015 2f1f36b48c01753a00ddefea91102fbb 224 SUPERFAMILY SSF52172 83 147 1.22E-11 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Pfam PF03764 Elongation factor G, domain IV 484 603 1.2E-47 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Gene3D G3DSA:3.40.50.300 1 298 1.3E-115 T 15-10-2018 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.3E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 15-10-2018 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SMART SM00889 485 603 2.3E-74 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.155 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SUPERFAMILY SSF52540 6 288 2.46E-107 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Pfam PF00679 Elongation factor G C-terminus 605 691 6.1E-32 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Gene3D G3DSA:3.30.230.10 489 693 2.0E-91 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SMART SM00838 605 693 2.7E-58 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 15-10-2018 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SUPERFAMILY SSF54211 484 604 1.74E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SUPERFAMILY SSF50447 271 409 5.74E-35 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Gene3D G3DSA:3.30.70.240 609 680 2.0E-91 T 15-10-2018 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 7.8E-35 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 9.8E-67 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SUPERFAMILY SSF54980 407 485 8.63E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 Gene3D G3DSA:2.40.30.10 299 405 1.8E-47 T 15-10-2018 VIBNI_A3183 2e6efea1b59bc128ecfae5e2ea265f7a 698 SUPERFAMILY SSF54980 608 695 3.79E-30 T 15-10-2018 IPR035647 EF-G domain III/V-like VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 3.6E-44 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 Gene3D G3DSA:1.20.1280.20 80 171 8.6E-27 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.03 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.0E-17 T 15-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 SUPERFAMILY SSF47144 77 170 2.88E-24 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 SUPERFAMILY SSF46565 1 74 3.53E-18 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 SMART SM00271 1 66 7.0E-10 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 Gene3D G3DSA:1.10.287.110 1 79 3.5E-24 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A2784 937b9bfd6b559770d3472e99abf95984 171 Pfam PF00226 DnaJ domain 2 70 1.9E-7 T 15-10-2018 IPR001623 DnaJ domain VIBNI_A0249 4761351b8355101afc0d329301613804 584 SUPERFAMILY SSF100950 300 553 4.94E-33 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0249 4761351b8355101afc0d329301613804 584 SUPERFAMILY SSF100950 12 260 4.02E-49 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0249 4761351b8355101afc0d329301613804 584 Gene3D G3DSA:3.40.1080.10 300 551 1.1E-46 T 15-10-2018 VIBNI_A0249 4761351b8355101afc0d329301613804 584 SMART SM00882 11 230 3.4E-5 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_A0249 4761351b8355101afc0d329301613804 584 Pfam PF01144 Coenzyme A transferase 15 227 2.1E-16 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_A1457 77345c8f8de2d2511f29166c317d46b5 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 183 5.6E-12 T 15-10-2018 VIBNI_A1457 77345c8f8de2d2511f29166c317d46b5 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 183 3.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A1457 77345c8f8de2d2511f29166c317d46b5 203 SUPERFAMILY SSF56784 4 197 7.29E-33 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1457 77345c8f8de2d2511f29166c317d46b5 203 Gene3D G3DSA:1.10.150.240 19 84 5.4E-38 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_A1457 77345c8f8de2d2511f29166c317d46b5 203 Gene3D G3DSA:3.40.50.1000 7 184 5.4E-38 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 SUPERFAMILY SSF53067 4 108 4.75E-32 T 15-10-2018 VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.1E-65 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 SUPERFAMILY SSF53067 113 219 1.07E-24 T 15-10-2018 VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 Pfam PF00814 Glycoprotease family 30 132 3.3E-31 T 15-10-2018 IPR000905 Gcp-like domain VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 Gene3D G3DSA:3.30.420.40 96 190 3.1E-80 T 15-10-2018 VIBNI_A2530 2584654578e5a0cfe3225b5aee31a721 233 Gene3D G3DSA:3.30.420.40 5 201 3.1E-80 T 15-10-2018 VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 SMART SM00895 94 221 3.3E-20 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 Gene3D G3DSA:1.20.120.530 93 232 2.3E-23 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 5.6E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 SUPERFAMILY SSF46785 10 99 4.09E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 SMART SM00345 13 72 5.1E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 Pfam PF07729 FCD domain 94 220 6.2E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 SUPERFAMILY SSF48008 92 229 6.54E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B2067 d48fd616658d901886e25b88fe9b7264 255 Gene3D G3DSA:1.10.10.10 4 75 3.8E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1558 96def8e7ef765ff6ec5f765251fa3a8e 211 Pfam PF07209 Protein of unknown function (DUF1415) 35 202 2.1E-66 T 15-10-2018 IPR009858 Protein of unknown function DUF1415 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Gene3D G3DSA:1.10.1040.50 498 710 2.4E-74 T 15-10-2018 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 7.1E-58 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Gene3D G3DSA:3.90.226.10 1 312 1.4E-90 T 15-10-2018 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 207 3.6E-40 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Gene3D G3DSA:3.40.50.720 315 497 1.4E-63 T 15-10-2018 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 SUPERFAMILY SSF48179 496 602 5.36E-28 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.35 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 SUPERFAMILY SSF48179 625 715 4.93E-25 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.1E-25 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 713 1.6E-6 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 SUPERFAMILY SSF51735 315 496 1.21E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 15-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VIBNI_A0032 9229251d1c534452451ee02c25119fe9 723 SUPERFAMILY SSF52096 2 305 4.82E-66 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Gene3D G3DSA:3.40.50.300 541 757 7.9E-65 T 15-10-2018 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 75 0.0023 T 15-10-2018 IPR004176 Clp, N-terminal VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 108 141 0.019 T 15-10-2018 IPR004176 Clp, N-terminal VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SMART SM01086 760 852 9.1E-12 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 830 1.3E-12 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SMART SM00382 588 740 1.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SMART SM00382 208 353 1.6E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SUPERFAMILY SSF52540 169 496 5.99E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.6E-31 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 2.6E-31 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 2.6E-31 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 2.6E-31 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Gene3D G3DSA:3.40.50.300 159 352 2.1E-60 T 15-10-2018 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 588 755 1.6E-38 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Gene3D G3DSA:3.40.50.300 354 535 2.9E-43 T 15-10-2018 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Gene3D G3DSA:1.10.1780.10 1 158 4.1E-33 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SUPERFAMILY SSF52540 537 844 1.05E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 SUPERFAMILY SSF81923 11 129 4.81E-17 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 345 2.6E-8 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 Gene3D G3DSA:1.10.8.60 760 852 1.0E-10 T 15-10-2018 VIBNI_A1442 1315dd56ab917c89e6f2b67dbddfd89b 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VIBNI_B0369 6482e7653ef97f94cd087b1e78ddb6bb 655 Pfam PF03170 Bacterial cellulose synthase subunit 29 414 1.2E-19 T 15-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 VIBNI_B0369 6482e7653ef97f94cd087b1e78ddb6bb 655 Gene3D G3DSA:2.60.120.260 316 439 3.3E-13 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0369 6482e7653ef97f94cd087b1e78ddb6bb 655 Gene3D G3DSA:2.60.120.260 17 146 3.1E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 SUPERFAMILY SSF53850 92 298 9.05E-42 T 15-10-2018 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 Pfam PF03466 LysR substrate binding domain 99 299 3.1E-21 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 Gene3D G3DSA:3.40.190.10 93 295 2.6E-67 T 15-10-2018 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 Gene3D G3DSA:1.10.10.10 3 90 4.0E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 Gene3D G3DSA:3.40.190.10 172 271 2.6E-67 T 15-10-2018 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 SUPERFAMILY SSF46785 7 87 1.28E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0015 43b75c539f3aada81839488b281b2fe4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0400 7708d92437632f985054a525eede0aab 171 Pfam PF13518 Helix-turn-helix domain 64 115 8.5E-10 T 15-10-2018 VIBNI_A0400 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF48295 2 56 4.66E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A0400 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF46689 62 157 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1816 7708d92437632f985054a525eede0aab 171 Pfam PF13518 Helix-turn-helix domain 64 115 8.5E-10 T 15-10-2018 VIBNI_A1816 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF48295 2 56 4.66E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A1816 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF46689 62 157 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0298 7708d92437632f985054a525eede0aab 171 Pfam PF13518 Helix-turn-helix domain 64 115 8.5E-10 T 15-10-2018 VIBNI_A0298 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF48295 2 56 4.66E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A0298 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF46689 62 157 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1339 7708d92437632f985054a525eede0aab 171 Pfam PF13518 Helix-turn-helix domain 64 115 8.5E-10 T 15-10-2018 VIBNI_A1339 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF48295 2 56 4.66E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A1339 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF46689 62 157 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1453 7708d92437632f985054a525eede0aab 171 Pfam PF13518 Helix-turn-helix domain 64 115 8.5E-10 T 15-10-2018 VIBNI_A1453 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF48295 2 56 4.66E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_A1453 7708d92437632f985054a525eede0aab 171 SUPERFAMILY SSF46689 62 157 2.33E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 SUPERFAMILY SSF82866 605 763 2.22E-33 T 15-10-2018 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 Gene3D G3DSA:1.20.1640.10 585 776 2.6E-18 T 15-10-2018 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 Gene3D G3DSA:1.20.1640.10 198 394 1.2E-11 T 15-10-2018 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 Pfam PF03176 MMPL family 55 391 8.1E-20 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 Pfam PF03176 MMPL family 551 765 1.8E-14 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 3.9E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 PRINTS PR00702 Acriflavin resistance protein family signature 222 245 3.9E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 PRINTS PR00702 Acriflavin resistance protein family signature 278 302 3.9E-5 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A1399 27776b233e499632852f5b7344027fe5 784 SUPERFAMILY SSF82866 164 379 1.83E-33 T 15-10-2018 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.682 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.0E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.0E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.0E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.0E-25 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.0E-31 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 Gene3D G3DSA:3.40.50.1370 8 304 3.9E-120 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 SUPERFAMILY SSF53671 4 307 3.27E-101 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 Gene3D G3DSA:3.40.50.1370 135 292 3.9E-120 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.7E-116 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 2.0E-36 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A3125 6ee7197a3c1b21d4f422b0d70ec49361 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.3E-46 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 SMART SM00283 361 622 5.2E-76 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 SUPERFAMILY SSF58104 314 621 3.14E-75 T 15-10-2018 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Gene3D G3DSA:1.10.287.950 292 623 4.5E-71 T 15-10-2018 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 SUPERFAMILY SSF103190 93 183 6.02E-18 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Gene3D G3DSA:3.30.450.20 62 173 2.0E-75 T 15-10-2018 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 589 6.9E-45 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Pfam PF00672 HAMP domain 294 343 8.8E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Pfam PF02743 Cache domain 34 254 2.6E-26 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 SMART SM00304 374 448 33.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 SMART SM00304 292 346 4.2E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1497 cbfeca75c47e3ef9dc0cb57681b4cdb7 623 Gene3D G3DSA:3.30.450.20 49 266 2.0E-75 T 15-10-2018 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 Gene3D G3DSA:3.40.50.720 101 288 1.4E-80 T 15-10-2018 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 Gene3D G3DSA:3.40.50.720 20 303 1.4E-80 T 15-10-2018 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 308 2.9E-21 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 SUPERFAMILY SSF51735 105 288 8.77E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 SUPERFAMILY SSF52283 16 139 1.17E-22 T 15-10-2018 VIBNI_B1786 015d8d2d6a1ac9be89931d2d6c9c461e 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 286 9.6E-49 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.2E-7 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.2E-7 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 Gene3D G3DSA:3.20.20.70 1 299 2.3E-98 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 SUPERFAMILY SSF51569 1 294 6.18E-70 T 15-10-2018 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 1.3E-47 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 SMART SM01130 3 294 1.1E-63 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A2738 bdd3ca432493ad5e2454c98a1cd6052e 300 PIRSF PIRSF001365 1 299 4.8E-67 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 SUPERFAMILY SSF47413 6 68 5.75E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 SUPERFAMILY SSF53822 68 327 1.01E-23 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 57 2.5E-9 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 Gene3D G3DSA:1.10.260.40 8 69 4.0E-15 T 15-10-2018 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 SMART SM00354 7 80 3.3E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 Gene3D G3DSA:3.40.50.2300 71 311 8.3E-30 T 15-10-2018 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 Gene3D G3DSA:3.40.50.2300 167 299 8.3E-30 T 15-10-2018 VIBNI_B2140 107de22fb887155f4ea4a85d901b0d4f 334 Pfam PF13407 Periplasmic binding protein domain 71 273 2.6E-8 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 SUPERFAMILY SSF50331 236 365 7.65E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 Pfam PF00005 ABC transporter 20 161 5.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 Gene3D G3DSA:3.40.50.300 1 238 8.9E-76 T 15-10-2018 VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 Gene3D G3DSA:2.40.50.100 239 364 1.3E-22 T 15-10-2018 VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 SMART SM00382 28 211 8.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 SUPERFAMILY SSF52540 4 243 2.96E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1246 f378374b8bc722f5b6e751686a8cfa9d 366 Gene3D G3DSA:2.40.50.140 284 350 1.3E-22 T 15-10-2018 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 SMART SM00342 185 267 5.9E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 Pfam PF02311 AraC-like ligand binding domain 30 148 2.8E-17 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 SUPERFAMILY SSF46689 170 218 7.17E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 263 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 Pfam PF12833 Helix-turn-helix domain 192 267 5.2E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 SUPERFAMILY SSF46689 222 268 2.02E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 Gene3D G3DSA:1.10.10.60 166 269 7.5E-28 T 15-10-2018 VIBNI_B1887 e5a4b03d05e9a4eddc90e563e8381f61 272 SUPERFAMILY SSF51215 23 153 1.44E-15 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 610 1.1E-37 T 15-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Pfam PF03445 Putative nucleotidyltransferase DUF294 308 439 1.3E-42 T 15-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 SMART SM00100 17 134 9.0E-6 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Gene3D G3DSA:2.60.120.10 16 144 1.9E-12 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 SMART SM00116 236 283 1.9 T 15-10-2018 IPR000644 CBS domain VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 SMART SM00116 161 219 3.8 T 15-10-2018 IPR000644 CBS domain VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Pfam PF00571 CBS domain 229 280 0.001 T 15-10-2018 IPR000644 CBS domain VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 SUPERFAMILY SSF51206 16 137 9.69E-17 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Gene3D G3DSA:3.10.580.10 149 293 5.3E-20 T 15-10-2018 VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 SUPERFAMILY SSF54631 150 281 2.36E-19 T 15-10-2018 VIBNI_A3296 cdd3886e20a53e99882bc788d1594df8 614 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 6.4E-10 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 SUPERFAMILY SSF51230 98 190 1.44E-22 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Pfam PF02817 e3 binding domain 221 255 1.4E-14 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 82 525 8.4E-209 T 15-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Gene3D G3DSA:2.40.50.100 98 175 2.6E-19 T 15-10-2018 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Gene3D G3DSA:2.40.50.100 1 80 8.6E-22 T 15-10-2018 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 SUPERFAMILY SSF47005 214 259 4.84E-13 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Gene3D G3DSA:4.10.320.10 220 265 4.4E-21 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 SUPERFAMILY SSF52777 283 524 9.78E-81 T 15-10-2018 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 121 150 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 294 524 1.9E-79 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Gene3D G3DSA:3.30.559.10 278 525 1.7E-96 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Pfam PF00364 Biotin-requiring enzyme 4 73 5.3E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 Pfam PF00364 Biotin-requiring enzyme 99 169 2.6E-20 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0182 4555b450c4c6a7c7405672f6630ea8bd 525 SUPERFAMILY SSF51230 1 93 3.53E-23 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0483 7aeca516affbc9840bb69703d0ea2a38 366 Pfam PF13407 Periplasmic binding protein domain 84 323 4.0E-45 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A0483 7aeca516affbc9840bb69703d0ea2a38 366 SUPERFAMILY SSF53822 83 342 2.2E-57 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0483 7aeca516affbc9840bb69703d0ea2a38 366 Gene3D G3DSA:3.40.50.2300 93 332 1.1E-62 T 15-10-2018 VIBNI_A0483 7aeca516affbc9840bb69703d0ea2a38 366 Gene3D G3DSA:3.40.50.2300 170 306 1.1E-62 T 15-10-2018 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 Gene3D G3DSA:3.40.309.10 248 437 4.6E-137 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 486 55.912 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 Gene3D G3DSA:3.40.605.10 8 449 4.6E-137 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 SUPERFAMILY SSF53720 3 450 4.45E-118 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 485 8.3E-227 T 15-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 Pfam PF00171 Aldehyde dehydrogenase family 10 459 2.9E-116 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A3554 9705a479f432eb331efd6a17683886c1 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B2167 7077a9c08d31f6595dcf18718e2fbe2b 110 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 108 1.5E-34 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VIBNI_B2167 7077a9c08d31f6595dcf18718e2fbe2b 110 SUPERFAMILY SSF50022 5 109 1.73E-33 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_B2167 7077a9c08d31f6595dcf18718e2fbe2b 110 Gene3D G3DSA:2.102.10.10 1 110 1.0E-31 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_B2167 7077a9c08d31f6595dcf18718e2fbe2b 110 Pfam PF13806 Rieske-like [2Fe-2S] domain 5 107 1.8E-38 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 SUPERFAMILY SSF51306 79 201 5.58E-36 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 Gene3D G3DSA:1.10.10.10 1 69 1.5E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 SUPERFAMILY SSF46785 3 69 7.67E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 1.1E-80 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 5.6E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 5.6E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 5.6E-13 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.323 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 Pfam PF00717 Peptidase S24-like 117 183 8.2E-15 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 Pfam PF01726 LexA DNA binding domain 1 65 2.2E-28 T 15-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VIBNI_A3357 aaa73086ae82063bb6475c14fb0a76be 205 Gene3D G3DSA:2.10.109.10 83 205 7.3E-44 T 15-10-2018 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 Gene3D G3DSA:1.10.10.10 1 55 2.5E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 SUPERFAMILY SSF100950 74 232 1.93E-28 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 4.7E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.0E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.0E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 SUPERFAMILY SSF46785 4 70 1.56E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 Pfam PF00455 DeoR C terminal sensor domain 75 231 7.4E-45 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 SMART SM01134 72 233 6.4E-55 T 15-10-2018 VIBNI_B1013 137e5cf4f6e7cc9350be2b5965c60643 255 SMART SM00420 6 58 3.5E-19 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 SUPERFAMILY SSF52172 24 147 4.41E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 Gene3D G3DSA:3.40.50.2300 11 147 3.2E-36 T 15-10-2018 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 Pfam PF00072 Response regulator receiver domain 26 133 2.4E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 Gene3D G3DSA:1.10.10.10 148 252 3.0E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 SMART SM00862 173 251 7.6E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 SUPERFAMILY SSF46894 155 251 9.07E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 176 251 3.5E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0885 7386b7d68d3ef57e449b9874dd0863b8 252 SMART SM00448 23 133 3.9E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1000 0837b4a866e8f5f3a07fce665691e1d3 353 Pfam PF01497 Periplasmic binding protein 100 277 4.5E-11 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A1000 0837b4a866e8f5f3a07fce665691e1d3 353 Gene3D G3DSA:3.40.50.1980 14 345 6.2E-65 T 15-10-2018 VIBNI_A1000 0837b4a866e8f5f3a07fce665691e1d3 353 SUPERFAMILY SSF53807 26 337 1.1E-42 T 15-10-2018 VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 SUPERFAMILY SSF51735 3 167 4.08E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 147 267 4.1E-8 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 132 4.0E-20 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 Gene3D G3DSA:3.40.50.720 10 342 1.7E-123 T 15-10-2018 VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 Gene3D G3DSA:3.30.360.10 140 366 1.7E-123 T 15-10-2018 VIBNI_A0792 d06009f4957406ad15ccf8e487586860 375 SUPERFAMILY SSF55347 141 306 2.29E-36 T 15-10-2018 VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.262 T 15-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 PIRSF PIRSF005624 2 205 1.5E-52 T 15-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 SUPERFAMILY SSF52540 4 199 5.08E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 199 9.6E-104 T 15-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 Gene3D G3DSA:3.40.50.300 8 203 2.2E-52 T 15-10-2018 VIBNI_B0594 cc884cdb0590b437b239302bf9a8c8c8 206 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 179 1.0E-40 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.2E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 SMART SM00448 2 115 4.5E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 SMART SM00421 146 203 2.9E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 Gene3D G3DSA:3.40.50.12740 2 209 1.6E-59 T 15-10-2018 VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 SUPERFAMILY SSF52172 2 132 6.4E-34 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1306 4cec3701eeb506b5a28f1046b3265755 214 SUPERFAMILY SSF46894 136 210 3.03E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2252 177091ef0316acbd57a4644a32642610 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 4.6E-29 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 VIBNI_A2252 177091ef0316acbd57a4644a32642610 189 SUPERFAMILY SSF101327 2 175 8.76E-27 T 15-10-2018 IPR036255 YgfB-like superfamily VIBNI_A2252 177091ef0316acbd57a4644a32642610 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 3.7E-39 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 SUPERFAMILY SSF53850 89 297 1.48E-29 T 15-10-2018 VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 SUPERFAMILY SSF46785 2 112 1.85E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 Gene3D G3DSA:3.40.190.10 163 267 2.5E-51 T 15-10-2018 VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 Gene3D G3DSA:1.10.10.10 1 91 2.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 Gene3D G3DSA:3.40.190.10 92 293 2.5E-51 T 15-10-2018 VIBNI_B1701 400400742f728545a4924ce19adcd9eb 307 Pfam PF03466 LysR substrate binding domain 88 296 1.7E-30 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2553 0b5674387fcd7a277a285b5bd3e9b296 261 SUPERFAMILY SSF81345 2 257 1.44E-40 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A2553 0b5674387fcd7a277a285b5bd3e9b296 261 Gene3D G3DSA:1.10.3470.10 28 260 5.4E-8 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A2553 0b5674387fcd7a277a285b5bd3e9b296 261 Pfam PF00950 ABC 3 transport family 1 256 1.9E-75 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VIBNI_A1870 b103f52f9152e490b5529a94106eb4e5 238 SUPERFAMILY SSF53697 2 198 4.85E-27 T 15-10-2018 VIBNI_A1870 b103f52f9152e490b5529a94106eb4e5 238 Pfam PF13580 SIS domain 3 138 2.2E-35 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A1870 b103f52f9152e490b5529a94106eb4e5 238 Gene3D G3DSA:3.40.50.10490 1 231 1.8E-69 T 15-10-2018 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SMART SM00073 5 102 6.8E-26 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 303 365 2.3E-16 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SMART SM01231 302 365 7.6E-19 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 553 3.0E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Gene3D G3DSA:1.10.287.560 302 365 1.3E-16 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 6.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 6.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 6.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 6.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SMART SM00260 546 685 2.0E-36 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SUPERFAMILY SSF47384 303 366 2.24E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Gene3D G3DSA:2.30.30.40 554 681 8.3E-37 T 15-10-2018 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SUPERFAMILY SSF47226 4 128 2.09E-29 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Gene3D G3DSA:3.30.565.10 366 553 1.4E-58 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SUPERFAMILY SSF50341 553 685 1.23E-29 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Pfam PF01627 Hpt domain 7 104 1.0E-17 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SUPERFAMILY SSF55874 369 552 2.23E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Gene3D G3DSA:2.40.50.180 577 640 8.3E-37 T 15-10-2018 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 SMART SM00387 410 554 1.2E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Pfam PF01584 CheW-like domain 561 687 3.1E-25 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_B0008 83bf2653a3c052f467501ca325cec7f8 701 Gene3D G3DSA:1.20.120.160 1 144 1.0E-37 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 99.842 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 5.2E-37 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 SUPERFAMILY SSF52540 1 341 1.5E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 5.1E-120 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 Gene3D G3DSA:1.20.1050.90 121 298 4.7E-83 T 15-10-2018 VIBNI_A0003 c4a5aec39e6fd0195fd0374536f3f29f 359 Gene3D G3DSA:3.40.50.300 8 332 4.7E-83 T 15-10-2018 VIBNI_B1688 23e1f0e8126bfd8c50ea68ab5b36f549 339 SUPERFAMILY SSF161098 109 327 1.7E-53 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1688 23e1f0e8126bfd8c50ea68ab5b36f549 339 Gene3D G3DSA:1.10.3720.10 108 336 1.9E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1688 23e1f0e8126bfd8c50ea68ab5b36f549 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 332 1.4E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0964 3c3dac7e4d59d4f63201deb8110a662f 169 SUPERFAMILY SSF52540 3 162 9.91E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0964 3c3dac7e4d59d4f63201deb8110a662f 169 Gene3D G3DSA:3.40.50.300 1 168 5.7E-55 T 15-10-2018 VIBNI_B0964 3c3dac7e4d59d4f63201deb8110a662f 169 Pfam PF01202 Shikimate kinase 12 161 4.1E-17 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VIBNI_B0964 3c3dac7e4d59d4f63201deb8110a662f 169 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 162 1.3E-50 T 15-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 SUPERFAMILY SSF58104 397 706 3.79E-74 T 15-10-2018 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Gene3D G3DSA:1.10.287.950 375 706 1.6E-69 T 15-10-2018 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 SMART SM00304 375 429 2.1E-14 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Pfam PF00672 HAMP domain 376 425 3.8E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 519 672 9.8E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Gene3D G3DSA:3.30.450.20 235 334 1.8E-27 T 15-10-2018 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Pfam PF02743 Cache domain 48 325 1.1E-16 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 SMART SM00283 444 705 4.5E-66 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2142 480b7a436e8dd1a77d46e60f0c4a6af8 706 Gene3D G3DSA:3.30.450.20 91 234 1.8E-27 T 15-10-2018 VIBNI_B1276 c606a3028e39d183d580509a45f61a55 170 Gene3D G3DSA:3.10.450.50 18 170 8.7E-20 T 15-10-2018 VIBNI_B1276 c606a3028e39d183d580509a45f61a55 170 PIRSF PIRSF028288 3 170 4.2E-37 T 15-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 VIBNI_B1276 c606a3028e39d183d580509a45f61a55 170 SUPERFAMILY SSF54427 104 167 7.67E-6 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A0941 571d3e26777d2b6a8251f9a3b7a0427a 100 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 3 75 3.0E-13 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VIBNI_A0941 571d3e26777d2b6a8251f9a3b7a0427a 100 Gene3D G3DSA:1.10.10.10 1 100 3.8E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0941 571d3e26777d2b6a8251f9a3b7a0427a 100 SUPERFAMILY SSF46767 2 84 3.66E-25 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VIBNI_A0941 571d3e26777d2b6a8251f9a3b7a0427a 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 3.6E-24 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 PIRSF PIRSF039085 5 248 3.9E-110 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 SUPERFAMILY SSF52540 8 242 2.79E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 SMART SM00382 33 220 1.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 Gene3D G3DSA:3.40.50.300 6 247 1.3E-78 T 15-10-2018 VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 Pfam PF00005 ABC transporter 24 172 5.1E-39 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1809 94e3d60ba2ac3fa2f2b243ca85d6de9c 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1439 7bf7709aa0ee29dde4826dc8a6319506 160 Pfam PF04965 Gene 25-like lysozyme 43 131 2.5E-16 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VIBNI_A1439 7bf7709aa0ee29dde4826dc8a6319506 160 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 150 8.5E-30 T 15-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VIBNI_A1439 7bf7709aa0ee29dde4826dc8a6319506 160 SUPERFAMILY SSF160719 37 145 2.75E-7 T 15-10-2018 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 Pfam PF12697 Alpha/beta hydrolase family 30 276 5.8E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 Gene3D G3DSA:3.40.50.1820 4 279 3.4E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 SUPERFAMILY SSF53474 6 284 1.47E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00412 Epoxide hydrolase signature 102 115 5.8E-7 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00412 Epoxide hydrolase signature 116 129 5.8E-7 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00412 Epoxide hydrolase signature 34 52 5.8E-7 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00412 Epoxide hydrolase signature 56 71 5.8E-7 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00412 Epoxide hydrolase signature 259 281 5.8E-7 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 4.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 4.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2527 8c9cf53bac46d01a8fb8a9cc4ee3bff7 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 4.8E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 PRINTS PR00147 DNA photolyase signature 333 349 1.1E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 PRINTS PR00147 DNA photolyase signature 141 157 1.1E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 PRINTS PR00147 DNA photolyase signature 353 371 1.1E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 PRINTS PR00147 DNA photolyase signature 392 406 1.1E-30 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 Gene3D G3DSA:1.25.40.80 130 297 5.4E-73 T 15-10-2018 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 SUPERFAMILY SSF52425 1 177 7.72E-48 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 333 345 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 Gene3D G3DSA:1.10.579.10 301 479 3.2E-81 T 15-10-2018 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 Pfam PF00875 DNA photolyase 3 161 6.5E-43 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 Gene3D G3DSA:3.40.50.620 3 209 5.4E-73 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 SUPERFAMILY SSF48173 200 478 1.83E-107 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 Pfam PF03441 FAD binding domain of DNA photolyase 283 475 5.5E-83 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VIBNI_B1750 29b9548742be7573a27adcc060d1e256 479 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 353 372 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 484 3.0E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 SMART SM00267 323 490 3.4E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 Gene3D G3DSA:3.30.450.20 27 180 6.3E-7 T 15-10-2018 VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 Pfam PF00563 EAL domain 506 740 3.3E-68 T 15-10-2018 IPR001633 EAL domain VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 SMART SM00052 500 745 9.5E-101 T 15-10-2018 IPR001633 EAL domain VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 488 6.6E-33 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 SUPERFAMILY SSF55073 339 491 6.04E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 Gene3D G3DSA:3.30.70.270 329 502 2.0E-50 T 15-10-2018 VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 Gene3D G3DSA:3.20.20.450 503 756 2.9E-86 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1018 469ac9d3ec711fa0359d4661fe448fde 763 SUPERFAMILY SSF141868 505 752 4.84E-80 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 Pfam PF13426 PAS domain 201 305 2.7E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 478 4.4E-48 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 SUPERFAMILY SSF55785 179 304 6.09E-14 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 SUPERFAMILY SSF55073 322 478 3.22E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 SMART SM00091 191 257 1.6E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 313 7.3E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 SMART SM00267 306 480 3.9E-59 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 476 9.7E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 Gene3D G3DSA:3.30.450.20 179 307 2.7E-14 T 15-10-2018 VIBNI_B0839 20f0fad064863b030745fdd805659dd0 488 Gene3D G3DSA:3.30.70.270 308 480 6.5E-54 T 15-10-2018 VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.4E-66 T 15-10-2018 IPR023798 Ribosomal protein S7 domain VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 Gene3D G3DSA:1.10.455.10 2 155 4.0E-64 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 SUPERFAMILY SSF47973 6 149 1.28E-59 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.748 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 PIRSF PIRSF002122 3 156 4.8E-63 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3184 220dd27092a62fe17de57a679bda84d0 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.4E-71 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VIBNI_B2027 1615552bcb2a69835179033809353f40 610 Gene3D G3DSA:3.30.450.40 22 146 2.8E-5 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B2027 1615552bcb2a69835179033809353f40 610 SUPERFAMILY SSF55781 25 168 9.32E-9 T 15-10-2018 VIBNI_B2027 1615552bcb2a69835179033809353f40 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 326 9.7E-29 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2027 1615552bcb2a69835179033809353f40 610 SMART SM00267 169 332 6.4E-30 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2027 1615552bcb2a69835179033809353f40 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 331 2.4E-25 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2027 1615552bcb2a69835179033809353f40 610 Gene3D G3DSA:3.30.70.270 174 347 9.8E-36 T 15-10-2018 VIBNI_B2027 1615552bcb2a69835179033809353f40 610 SMART SM00052 347 594 1.7E-78 T 15-10-2018 IPR001633 EAL domain VIBNI_B2027 1615552bcb2a69835179033809353f40 610 SUPERFAMILY SSF141868 355 601 6.15E-72 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B2027 1615552bcb2a69835179033809353f40 610 SUPERFAMILY SSF55073 185 335 1.96E-32 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B2027 1615552bcb2a69835179033809353f40 610 Pfam PF00563 EAL domain 357 589 1.2E-59 T 15-10-2018 IPR001633 EAL domain VIBNI_B2027 1615552bcb2a69835179033809353f40 610 Gene3D G3DSA:3.20.20.450 348 602 5.0E-77 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 Gene3D G3DSA:3.40.50.2300 1 125 7.4E-40 T 15-10-2018 VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 SUPERFAMILY SSF52172 3 127 1.57E-41 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 Pfam PF00072 Response regulator receiver domain 7 117 5.5E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 SUPERFAMILY SSF46894 132 234 2.3E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 Gene3D G3DSA:1.10.10.10 130 239 4.3E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 SMART SM00862 156 232 1.5E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A3723 2a07b3d5b2b8d8af467af61b83a2c82b 239 SMART SM00448 5 116 6.3E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0694 4d628a459cf435f364c0b5f1723e2615 224 SUPERFAMILY SSF55166 22 176 1.54E-19 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A0694 4d628a459cf435f364c0b5f1723e2615 224 Gene3D G3DSA:3.30.1380.10 5 194 3.7E-34 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A0694 4d628a459cf435f364c0b5f1723e2615 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 178 2.4E-35 T 15-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 Gene3D G3DSA:3.30.70.260 123 201 1.2E-72 T 15-10-2018 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 SUPERFAMILY SSF100950 1 148 4.12E-40 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 SUPERFAMILY SSF75445 129 212 3.53E-20 T 15-10-2018 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 230 29.486 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 52 226 3.2E-57 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 Gene3D G3DSA:3.40.50.1360 11 213 1.2E-72 T 15-10-2018 VIBNI_A1503 30dcc55379c6ec2211d82a74dbb6d587 239 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 227 6.9E-77 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 Gene3D G3DSA:3.40.50.150 75 274 5.1E-60 T 15-10-2018 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 SUPERFAMILY SSF47757 3 75 4.84E-15 T 15-10-2018 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 9.4E-10 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 5.5E-43 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 Gene3D G3DSA:1.10.155.10 1 74 1.7E-10 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 SUPERFAMILY SSF53335 76 269 4.33E-49 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 SMART SM00138 8 272 6.4E-129 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VIBNI_A2643 aad0c8c1918302cd8d76adb6010c4c7d 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.3E-67 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VIBNI_A3615 e3febaa4ab8ecee17754bd356b0ef2c9 142 Pfam PF05656 Protein of unknown function (DUF805) 8 140 2.0E-19 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VIBNI_B1498 6b9fc23b0979806e8ddc040621fe1dd9 407 SUPERFAMILY SSF51905 9 301 1.04E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1498 6b9fc23b0979806e8ddc040621fe1dd9 407 Gene3D G3DSA:3.30.9.10 94 361 3.1E-78 T 15-10-2018 VIBNI_B1498 6b9fc23b0979806e8ddc040621fe1dd9 407 Gene3D G3DSA:3.50.50.60 11 394 3.1E-78 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1498 6b9fc23b0979806e8ddc040621fe1dd9 407 Pfam PF01266 FAD dependent oxidoreductase 11 399 1.1E-67 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 Gene3D G3DSA:3.40.50.2000 254 464 1.2E-153 T 15-10-2018 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 Pfam PF08323 Starch synthase catalytic domain 5 235 7.2E-66 T 15-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 Gene3D G3DSA:3.40.50.2000 6 479 1.2E-153 T 15-10-2018 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 4 481 3.9E-155 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 SUPERFAMILY SSF53756 5 483 3.01E-115 T 15-10-2018 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 Hamap MF_00484 Glycogen synthase [glgA]. 4 482 40.476 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VIBNI_A2117 763ca0fc42450282ffc742a58cbc7ff7 485 Pfam PF00534 Glycosyl transferases group 1 295 443 1.1E-14 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_B1480 1a86067c119d17edea627528e71ca2a9 180 Pfam PF13505 Outer membrane protein beta-barrel domain 5 180 9.5E-14 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_B1480 1a86067c119d17edea627528e71ca2a9 180 Gene3D G3DSA:2.40.160.20 19 180 1.6E-16 T 15-10-2018 VIBNI_B1480 1a86067c119d17edea627528e71ca2a9 180 SUPERFAMILY SSF56925 20 180 4.19E-16 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B1341 f6fe18d34eea8f4c64109e029c649361 165 Gene3D G3DSA:2.40.440.10 16 165 3.5E-17 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VIBNI_B1341 f6fe18d34eea8f4c64109e029c649361 165 Pfam PF03734 L,D-transpeptidase catalytic domain 28 156 6.1E-17 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VIBNI_B1341 f6fe18d34eea8f4c64109e029c649361 165 SUPERFAMILY SSF141523 27 156 8.37E-23 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 500 4.3E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 Gene3D G3DSA:1.10.287.950 204 535 2.6E-76 T 15-10-2018 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 SUPERFAMILY SSF58104 226 535 8.24E-78 T 15-10-2018 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 SMART SM00283 273 534 2.2E-79 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 Pfam PF00672 HAMP domain 205 254 1.4E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 1.0E-5 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 1.0E-5 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 SMART SM00304 293 346 9.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1048 7b08e2f80e147d4e27677cbe5d9d204e 535 SMART SM00304 204 258 1.4E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2090 982af73f23be644e6794736b38803233 199 SUPERFAMILY SSF56784 8 194 7.58E-46 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A2090 982af73f23be644e6794736b38803233 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 1.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2090 982af73f23be644e6794736b38803233 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 1.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2090 982af73f23be644e6794736b38803233 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 1.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2090 982af73f23be644e6794736b38803233 199 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 8 188 6.3E-54 T 15-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VIBNI_A2090 982af73f23be644e6794736b38803233 199 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 11 167 3.6E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2090 982af73f23be644e6794736b38803233 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 188 2.0E-29 T 15-10-2018 VIBNI_A2090 982af73f23be644e6794736b38803233 199 Gene3D G3DSA:3.40.50.1000 10 189 1.6E-45 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2090 982af73f23be644e6794736b38803233 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 188 2.7E-13 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2090 982af73f23be644e6794736b38803233 199 Gene3D G3DSA:1.10.150.240 21 91 1.6E-45 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 7.0E-54 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 PIRSF PIRSF000179 6 125 2.3E-54 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 SUPERFAMILY SSF81343 8 125 3.92E-49 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 Pfam PF02313 Fumarate reductase subunit D 11 121 2.3E-44 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.318 T 15-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VIBNI_A3239 f8d0556b2c70878f637d00cdc7b72f48 125 Gene3D G3DSA:1.20.1300.10 6 125 5.2E-44 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 Gene3D G3DSA:2.40.160.10 25 385 1.9E-42 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 1.1E-6 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 104 114 1.1E-6 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 377 385 1.1E-6 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 165 176 1.1E-6 T 15-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 Pfam PF13609 Gram-negative porin 13 348 2.8E-34 T 15-10-2018 VIBNI_B1332 fd94714ea184f9cab3707dc2970692fd 385 SUPERFAMILY SSF56935 26 385 7.63E-40 T 15-10-2018 VIBNI_A3644 4df658563eab78117e4b6a2f231563c8 293 SUPERFAMILY SSF51735 1 290 2.26E-103 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3644 4df658563eab78117e4b6a2f231563c8 293 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 287 6.4E-100 T 15-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VIBNI_A3644 4df658563eab78117e4b6a2f231563c8 293 Gene3D G3DSA:3.90.25.10 160 286 9.6E-106 T 15-10-2018 VIBNI_A3644 4df658563eab78117e4b6a2f231563c8 293 Pfam PF04321 RmlD substrate binding domain 1 288 1.9E-103 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VIBNI_A3644 4df658563eab78117e4b6a2f231563c8 293 Gene3D G3DSA:3.40.50.720 3 279 9.6E-106 T 15-10-2018 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 SMART SM00535 20 148 1.8E-56 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 Gene3D G3DSA:1.10.1520.10 2 147 1.1E-44 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 SMART SM00358 155 223 2.5E-20 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 SUPERFAMILY SSF54768 108 222 2.04E-28 T 15-10-2018 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 Pfam PF14622 Ribonuclease-III-like 18 140 2.0E-33 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.102 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 221 1.2E-74 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 SUPERFAMILY SSF69065 4 158 2.09E-50 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 Gene3D G3DSA:3.30.160.20 153 224 4.5E-19 T 15-10-2018 VIBNI_A0114 9eaba63fd5017d4d20a7ed4a3e83d53f 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 3.0E-15 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain VIBNI_B0377 5ece977c1a58b0f0bc64f38c4adaf96d 390 Gene3D G3DSA:1.20.1250.20 1 381 5.7E-28 T 15-10-2018 VIBNI_B0377 5ece977c1a58b0f0bc64f38c4adaf96d 390 SUPERFAMILY SSF103473 3 385 2.35E-36 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0377 5ece977c1a58b0f0bc64f38c4adaf96d 390 Pfam PF07690 Major Facilitator Superfamily 4 342 2.7E-24 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 SUPERFAMILY SSF57783 2 35 4.25E-13 T 15-10-2018 VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 1.7E-41 T 15-10-2018 IPR004624 PhnA protein VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 SUPERFAMILY SSF82057 38 111 5.49E-25 T 15-10-2018 VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 Pfam PF08274 PhnA Zinc-Ribbon 3 30 3.3E-12 T 15-10-2018 IPR013987 PhnA protein, N-terminal VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 Gene3D G3DSA:2.20.25.10 1 39 3.3E-17 T 15-10-2018 VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 Pfam PF03831 PhnA domain 43 111 6.6E-28 T 15-10-2018 IPR013988 PhnA protein, C-terminal VIBNI_B1266 750db67e279f1a321a4d4ce1e43163e5 111 Gene3D G3DSA:2.30.30.40 40 111 5.8E-29 T 15-10-2018 VIBNI_B0159 cbc71a98c988b2ecd235fcbae36cd340 248 Pfam PF01841 Transglutaminase-like superfamily 35 136 3.5E-15 T 15-10-2018 IPR002931 Transglutaminase-like VIBNI_B0159 cbc71a98c988b2ecd235fcbae36cd340 248 Gene3D G3DSA:3.10.620.30 1 146 8.1E-16 T 15-10-2018 VIBNI_B0159 cbc71a98c988b2ecd235fcbae36cd340 248 SUPERFAMILY SSF54001 20 148 2.1E-19 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VIBNI_A1057 20fe784aeb86726e710d030083c59ecd 252 Pfam PF01048 Phosphorylase superfamily 20 246 5.1E-41 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VIBNI_A1057 20fe784aeb86726e710d030083c59ecd 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.6E-109 T 15-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VIBNI_A1057 20fe784aeb86726e710d030083c59ecd 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 15-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1057 20fe784aeb86726e710d030083c59ecd 252 Gene3D G3DSA:3.40.50.1580 1 252 1.4E-81 T 15-10-2018 VIBNI_A1057 20fe784aeb86726e710d030083c59ecd 252 SUPERFAMILY SSF53167 4 251 1.44E-71 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VIBNI_B1145 0fec5e21d892d4c68e17b648c980a03f 464 Gene3D G3DSA:3.40.50.1220 288 464 7.3E-89 T 15-10-2018 VIBNI_B1145 0fec5e21d892d4c68e17b648c980a03f 464 SUPERFAMILY SSF52467 291 461 1.31E-77 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_B1145 0fec5e21d892d4c68e17b648c980a03f 464 PIRSF PIRSF000204 1 464 2.9E-235 T 15-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VIBNI_B1145 0fec5e21d892d4c68e17b648c980a03f 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 2.0E-201 T 15-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 Pfam PF00106 short chain dehydrogenase 3 190 1.3E-51 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 SUPERFAMILY SSF51735 4 222 5.43E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 Gene3D G3DSA:3.40.50.720 2 229 9.7E-59 T 15-10-2018 VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PIRSF PIRSF000126 1 259 7.2E-70 T 15-10-2018 VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.5E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.5E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.5E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.5E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0462 4e15cfd7f16f4f13f0fc3345835c66aa 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.5E-25 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.5E-194 T 15-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 SUPERFAMILY SSF52540 1 239 7.18E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 SMART SM00382 30 217 1.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 Pfam PF09383 NIL domain 268 339 1.4E-18 T 15-10-2018 IPR018449 NIL domain VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 SUPERFAMILY SSF55021 248 343 6.41E-24 T 15-10-2018 VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 Gene3D G3DSA:3.40.50.300 1 232 4.8E-73 T 15-10-2018 VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 SMART SM00930 265 340 1.1E-24 T 15-10-2018 IPR018449 NIL domain VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 Pfam PF00005 ABC transporter 23 169 3.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2732 2f3bd03cd8eda63207fdbf460e0faa84 344 Gene3D G3DSA:3.30.70.260 233 343 5.6E-36 T 15-10-2018 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 SUPERFAMILY SSF53383 85 430 2.02E-51 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 7.8E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 Gene3D G3DSA:1.10.10.10 11 82 7.6E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 Gene3D G3DSA:3.40.640.10 118 331 5.3E-44 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 SUPERFAMILY SSF46785 11 76 4.04E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 Gene3D G3DSA:3.90.1150.10 101 421 5.3E-44 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 7.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 7.4E-5 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 Pfam PF00155 Aminotransferase class I and II 90 427 6.4E-24 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B0296 9cc700a9ab2b3cb4f93c9f728c745235 432 SMART SM00345 13 72 4.1E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 Gene3D G3DSA:3.10.310.20 188 301 5.1E-23 T 15-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 SUPERFAMILY SSF64182 1 298 1.83E-67 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 Gene3D G3DSA:3.90.1640.10 1 186 5.9E-64 T 15-10-2018 VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 Pfam PF01368 DHH family 2 142 2.1E-22 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 SMART SM01131 178 300 9.6E-35 T 15-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A1335 199f87622057745ff90593ff389ef8f7 301 Pfam PF02833 DHHA2 domain 180 297 3.0E-16 T 15-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_B0267 673cd009403c72891fc5b89a26808744 301 SUPERFAMILY SSF103481 49 139 2.88E-13 T 15-10-2018 VIBNI_B0267 673cd009403c72891fc5b89a26808744 301 SUPERFAMILY SSF103481 182 282 3.53E-14 T 15-10-2018 VIBNI_B0267 673cd009403c72891fc5b89a26808744 301 Pfam PF00892 EamA-like transporter family 10 136 7.8E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0267 673cd009403c72891fc5b89a26808744 301 Pfam PF00892 EamA-like transporter family 146 280 3.6E-23 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A0890 2339ffb46f0b77aed419f2c097af3c3c 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 3.8E-57 T 15-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 15-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 SUPERFAMILY SSF56327 172 450 1.3E-71 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 Gene3D G3DSA:3.90.1820.20 3 444 2.1E-136 T 15-10-2018 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 5.8E-36 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 5.1E-60 T 15-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 4.7E-67 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A1735 561ee8589ebba0f1932d747daa5aa26f 451 SUPERFAMILY SSF51735 5 171 6.08E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-55 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.933 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 Pfam PF01668 SmpB protein 15 157 1.1E-56 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 4.2E-53 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 SUPERFAMILY SSF74982 8 139 6.8E-49 T 15-10-2018 IPR023620 Small protein B VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site VIBNI_A0617 a829c0717a0408f8917eadaf37ba4e5c 161 Gene3D G3DSA:2.40.280.10 7 136 3.4E-45 T 15-10-2018 IPR023620 Small protein B VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 Gene3D G3DSA:3.40.50.720 1 261 4.9E-89 T 15-10-2018 VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.2E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 259 8.0E-68 T 15-10-2018 VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 SUPERFAMILY SSF51735 6 260 8.42E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 3.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 3.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1797 92a15dbb01381fe668e4e9de124c56a9 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0606 31a60bc9e4d08847c867602a72cbd6b5 291 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 277 3.7E-13 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B0606 31a60bc9e4d08847c867602a72cbd6b5 291 Gene3D G3DSA:3.40.190.10 35 275 1.2E-19 T 15-10-2018 VIBNI_B0606 31a60bc9e4d08847c867602a72cbd6b5 291 Gene3D G3DSA:3.40.190.10 124 232 1.2E-19 T 15-10-2018 VIBNI_B0606 31a60bc9e4d08847c867602a72cbd6b5 291 SUPERFAMILY SSF53850 31 276 7.39E-27 T 15-10-2018 VIBNI_A1568 dedc2def25e539df00811376a9679184 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 55 6.6E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1568 dedc2def25e539df00811376a9679184 194 Gene3D G3DSA:1.10.10.60 1 65 7.7E-21 T 15-10-2018 VIBNI_A1568 dedc2def25e539df00811376a9679184 194 Gene3D G3DSA:1.10.357.10 70 191 1.8E-14 T 15-10-2018 VIBNI_A1568 dedc2def25e539df00811376a9679184 194 SUPERFAMILY SSF48498 85 174 1.05E-12 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A1568 dedc2def25e539df00811376a9679184 194 SUPERFAMILY SSF46689 2 66 2.94E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 Gene3D G3DSA:3.40.30.10 5 81 4.8E-23 T 15-10-2018 VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 79 6.3E-16 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 SUPERFAMILY SSF52833 6 104 7.21E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 Gene3D G3DSA:1.20.1050.10 82 206 4.8E-24 T 15-10-2018 VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 Pfam PF13410 Glutathione S-transferase, C-terminal domain 119 184 3.6E-6 T 15-10-2018 VIBNI_B0410 d2016a38e3fc5449f44b8ad52473100e 228 SUPERFAMILY SSF47616 80 199 6.96E-22 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A1269 dc4cfc9e5986cc8266d0117fd184a487 160 SUPERFAMILY SSF47413 2 59 1.53E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1269 dc4cfc9e5986cc8266d0117fd184a487 160 Gene3D G3DSA:1.10.260.40 1 98 1.9E-16 T 15-10-2018 VIBNI_A1269 dc4cfc9e5986cc8266d0117fd184a487 160 SMART SM00530 2 56 3.0E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1269 dc4cfc9e5986cc8266d0117fd184a487 160 Pfam PF01381 Helix-turn-helix 3 53 2.3E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1269 dc4cfc9e5986cc8266d0117fd184a487 160 Pfam PF13239 2TM domain 81 159 2.2E-24 T 15-10-2018 IPR025698 2TM domain VIBNI_A1664 655661e82735d68d45be8773e705e354 162 SUPERFAMILY SSF54001 41 161 7.36E-38 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VIBNI_A1664 655661e82735d68d45be8773e705e354 162 Gene3D G3DSA:3.90.1720.10 40 162 9.0E-39 T 15-10-2018 VIBNI_A1664 655661e82735d68d45be8773e705e354 162 Pfam PF00877 NlpC/P60 family 56 160 3.6E-28 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 Gene3D G3DSA:2.30.30.30 2 104 1.3E-40 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 SMART SM00739 4 31 4.3E-4 T 15-10-2018 IPR005824 KOW VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.076 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 9.4E-41 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 Pfam PF00467 KOW motif 8 37 1.4E-5 T 15-10-2018 IPR005824 KOW VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 SUPERFAMILY SSF50104 4 101 3.16E-34 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A3167 47f49eb7e1d2bba957566fd80d4a02c4 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 7.8E-24 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 SUPERFAMILY SSF53850 94 293 2.9E-24 T 15-10-2018 VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 Pfam PF03466 LysR substrate binding domain 95 294 5.5E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 Gene3D G3DSA:3.40.190.290 95 294 1.1E-37 T 15-10-2018 VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 SUPERFAMILY SSF46785 7 91 2.99E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 Gene3D G3DSA:1.10.10.10 6 92 1.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0376 ad9de0fb1136c30152828d184de63eed 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.2E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 Pfam PF00012 Hsp70 protein 136 286 1.9E-13 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 219 232 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 SUPERFAMILY SSF53067 213 452 2.79E-31 T 15-10-2018 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 Gene3D G3DSA:3.90.640.10 337 384 2.2E-12 T 15-10-2018 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 SUPERFAMILY SSF53067 1 211 1.04E-24 T 15-10-2018 VIBNI_B0272 fb24192ed8866f904935b62e06986c99 456 Gene3D G3DSA:3.30.420.40 385 439 2.2E-12 T 15-10-2018 VIBNI_A0998 ebfd3e3a4678ea8d624fd20d4d680687 245 SMART SM00382 26 202 5.2E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0998 ebfd3e3a4678ea8d624fd20d4d680687 245 Gene3D G3DSA:3.40.50.300 1 239 2.3E-59 T 15-10-2018 VIBNI_A0998 ebfd3e3a4678ea8d624fd20d4d680687 245 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0998 ebfd3e3a4678ea8d624fd20d4d680687 245 Pfam PF00005 ABC transporter 19 152 4.1E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0998 ebfd3e3a4678ea8d624fd20d4d680687 245 SUPERFAMILY SSF52540 2 218 1.64E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1064 dd8bedcdfcee9648988891c3f0c61ad4 285 SUPERFAMILY SSF56112 18 263 1.44E-29 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A1064 dd8bedcdfcee9648988891c3f0c61ad4 285 Pfam PF01636 Phosphotransferase enzyme family 29 238 5.7E-14 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase VIBNI_A1064 dd8bedcdfcee9648988891c3f0c61ad4 285 Gene3D G3DSA:3.90.1200.10 99 282 6.8E-16 T 15-10-2018 VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 SUPERFAMILY SSF55785 224 350 3.49E-7 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 Gene3D G3DSA:3.30.450.20 224 358 9.0E-8 T 15-10-2018 VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 SMART SM00267 352 525 2.1E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 520 9.8E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 523 2.5E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 Gene3D G3DSA:3.30.70.270 360 532 3.3E-46 T 15-10-2018 VIBNI_A0121 b7573824e2b4adabc36a1ab675fcccf7 532 SUPERFAMILY SSF55073 368 527 4.63E-37 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 PIRSF PIRSF000137 1 535 1.6E-165 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 Gene3D G3DSA:3.50.50.60 8 529 1.1E-188 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 SUPERFAMILY SSF51905 5 533 1.44E-91 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 Gene3D G3DSA:3.30.560.10 47 470 1.1E-188 T 15-10-2018 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 Pfam PF00732 GMC oxidoreductase 8 298 2.2E-88 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 SUPERFAMILY SSF54373 293 475 1.96E-58 T 15-10-2018 VIBNI_A3622 f15d9c09a5047e424fec7b283a54927b 535 Pfam PF05199 GMC oxidoreductase 389 525 1.8E-42 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Pfam PF01225 Mur ligase family, catalytic domain 27 102 8.9E-11 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Pfam PF08245 Mur ligase middle domain 116 316 8.1E-48 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 490 33.276 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Gene3D G3DSA:3.40.1190.10 109 340 1.1E-74 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 SUPERFAMILY SSF53623 111 335 4.58E-70 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 SUPERFAMILY SSF63418 14 105 1.57E-21 T 15-10-2018 IPR035911 MurE/MurF, N-terminal VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 SUPERFAMILY SSF53244 338 490 1.7E-47 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 340 423 1.0E-22 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Gene3D G3DSA:3.40.1390.10 3 106 8.7E-25 T 15-10-2018 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 490 2.1E-163 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VIBNI_A0224 481022605180c99f0b2c3e1e4d8350a5 494 Gene3D G3DSA:3.90.190.20 341 492 2.7E-54 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A1264 fe205a7eccaa6398674ec5b183636a20 136 Gene3D G3DSA:3.10.450.50 3 134 5.2E-31 T 15-10-2018 VIBNI_A1264 fe205a7eccaa6398674ec5b183636a20 136 Pfam PF12680 SnoaL-like domain 13 109 2.0E-6 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_A1264 fe205a7eccaa6398674ec5b183636a20 136 SUPERFAMILY SSF54427 8 130 4.68E-29 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B1437 a77e501aaa7663991192a2c0c28fb0c2 308 Pfam PF01522 Polysaccharide deacetylase 77 183 3.6E-15 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VIBNI_B1437 a77e501aaa7663991192a2c0c28fb0c2 308 SUPERFAMILY SSF88713 6 302 4.73E-99 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_B1437 a77e501aaa7663991192a2c0c28fb0c2 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 301 8.5E-159 T 15-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 VIBNI_B1437 a77e501aaa7663991192a2c0c28fb0c2 308 Gene3D G3DSA:3.20.20.370 2 307 4.3E-112 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:1.20.120.1320 44 137 1.4E-72 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:3.30.360.10 612 782 2.0E-103 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Pfam PF00696 Amino acid kinase family 5 277 4.0E-44 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:3.40.1160.10 8 290 1.4E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:3.30.70.260 326 380 2.6E-6 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 3.3E-64 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 SUPERFAMILY SSF53633 5 291 1.31E-57 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 SUPERFAMILY SSF55347 601 784 9.81E-46 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 SUPERFAMILY SSF51735 448 623 5.25E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 PIRSF PIRSF000727 5 803 1.9E-276 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 6.8E-16 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Pfam PF00742 Homoserine dehydrogenase 601 796 9.0E-44 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:3.40.50.720 451 799 2.0E-103 T 15-10-2018 VIBNI_A3599 ebb416047764039d9b36cac7e43ec291 803 Gene3D G3DSA:3.30.70.260 381 443 2.6E-6 T 15-10-2018 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 3.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 3.1E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 SUPERFAMILY SSF46689 242 287 9.86E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 SMART SM00342 205 288 5.0E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 SUPERFAMILY SSF51182 47 120 2.8E-6 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 Gene3D G3DSA:1.10.10.2730 247 287 1.8E-15 T 15-10-2018 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 SUPERFAMILY SSF46689 197 239 9.86E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 Pfam PF12833 Helix-turn-helix domain 211 286 2.9E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0151 31f69dd02c8024b9a2a688a5aac0e43f 291 Gene3D G3DSA:1.10.10.60 191 246 1.2E-7 T 15-10-2018 VIBNI_A1673 d42deee1b0d97206ac7ff5f18ffc56ec 234 Gene3D G3DSA:3.40.50.300 1 233 1.1E-50 T 15-10-2018 VIBNI_A1673 d42deee1b0d97206ac7ff5f18ffc56ec 234 Pfam PF00005 ABC transporter 25 165 6.6E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1673 d42deee1b0d97206ac7ff5f18ffc56ec 234 SMART SM00382 29 203 9.6E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1673 d42deee1b0d97206ac7ff5f18ffc56ec 234 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1673 d42deee1b0d97206ac7ff5f18ffc56ec 234 SUPERFAMILY SSF52540 5 214 3.55E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3756 a0755a0b5c7d19bacd3bf573066fe852 205 PIRSF PIRSF006324 1 205 8.3E-53 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3756 a0755a0b5c7d19bacd3bf573066fe852 205 Pfam PF01810 LysE type translocator 15 202 3.8E-37 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 Gene3D G3DSA:1.20.1530.20 4 383 3.4E-81 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 594 47.192 T 15-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 Pfam PF02254 TrkA-N domain 400 511 3.8E-23 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 SUPERFAMILY SSF51735 399 526 1.79E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 PRINTS PR00335 TrkA potassium uptake protein signature 456 466 8.3E-7 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 PRINTS PR00335 TrkA potassium uptake protein signature 399 413 8.3E-7 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 PRINTS PR00335 TrkA potassium uptake protein signature 416 430 8.3E-7 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 PRINTS PR00335 TrkA potassium uptake protein signature 445 455 8.3E-7 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 Gene3D G3DSA:3.40.50.720 397 558 1.2E-36 T 15-10-2018 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 Pfam PF00999 Sodium/hydrogen exchanger family 12 371 3.3E-66 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VIBNI_A3196 08840c737f73d5560d8314ace4350151 594 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 282 1.1E-81 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VIBNI_B2061 2dbae86f6f7db770d0c096aa65aed339 431 SUPERFAMILY SSF53474 34 418 2.28E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B2061 2dbae86f6f7db770d0c096aa65aed339 431 Pfam PF00561 alpha/beta hydrolase fold 49 202 3.2E-20 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B2061 2dbae86f6f7db770d0c096aa65aed339 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 51 59 2.8E-8 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VIBNI_B2061 2dbae86f6f7db770d0c096aa65aed339 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 81 92 2.8E-8 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VIBNI_B2061 2dbae86f6f7db770d0c096aa65aed339 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 138 152 2.8E-8 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VIBNI_B1648 1f71358561b9eb20ce314acf1e484b5b 297 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 69 91 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site VIBNI_B1648 1f71358561b9eb20ce314acf1e484b5b 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 295 19.87 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VIBNI_B1648 1f71358561b9eb20ce314acf1e484b5b 297 Pfam PF01040 UbiA prenyltransferase family 31 278 3.6E-65 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VIBNI_B1648 1f71358561b9eb20ce314acf1e484b5b 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 293 2.4E-101 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VIBNI_B1648 1f71358561b9eb20ce314acf1e484b5b 297 Gene3D G3DSA:1.10.357.140 22 180 4.6E-23 T 15-10-2018 VIBNI_B0254 f6bc6665be52f2efce8aa0fbdc850087 271 Gene3D G3DSA:3.20.10.10 122 269 7.1E-19 T 15-10-2018 VIBNI_B0254 f6bc6665be52f2efce8aa0fbdc850087 271 SUPERFAMILY SSF56752 24 251 1.31E-32 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VIBNI_B0254 f6bc6665be52f2efce8aa0fbdc850087 271 Pfam PF01063 Amino-transferase class IV 32 244 6.5E-30 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 SMART SM00387 364 463 1.9E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 Gene3D G3DSA:1.10.287.130 257 325 1.5E-6 T 15-10-2018 VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 Pfam PF11884 Domain of unknown function (DUF3404) 15 266 1.5E-92 T 15-10-2018 IPR021821 Protein of unknown function DUF3404 VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 SUPERFAMILY SSF47384 258 325 6.28E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 SMART SM00388 264 331 0.0011 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 459 4.0E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 SUPERFAMILY SSF55874 349 463 2.11E-14 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0148 ffb2bff6d4a290e57741593a03084c08 467 Gene3D G3DSA:3.30.565.10 328 465 2.3E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3423 f91c2eef2bca685675faca27a587e423 462 Gene3D G3DSA:3.40.50.410 310 458 8.7E-9 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A3423 f91c2eef2bca685675faca27a587e423 462 SUPERFAMILY SSF53300 125 435 6.86E-9 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 SMART SM00382 39 233 5.0E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 263 8.2E-8 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 Pfam PF00005 ABC transporter 30 184 6.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 SUPERFAMILY SSF52540 5 254 3.75E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2176 0e371113948a9239f28b7435f95cf35a 310 Gene3D G3DSA:3.40.50.300 3 308 6.1E-77 T 15-10-2018 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 Gene3D G3DSA:1.10.40.50 274 348 1.1E-25 T 15-10-2018 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 Pfam PF03193 RsgA GTPase 99 274 1.0E-58 T 15-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 SUPERFAMILY SSF52540 113 337 1.15E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 Gene3D G3DSA:2.40.50.140 35 101 1.9E-22 T 15-10-2018 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 338 37.591 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 Gene3D G3DSA:3.40.50.300 102 273 1.1E-50 T 15-10-2018 VIBNI_A3228 0854b0122d6ea62f629f411181960573 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 332 3.8E-91 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VIBNI_B1745 eab367840499cd0ecece286588902ac9 424 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 424 33.477 T 15-10-2018 IPR021144 Uncharacterised protein family UPF0597 VIBNI_B1745 eab367840499cd0ecece286588902ac9 424 Pfam PF03313 Serine dehydratase alpha chain 160 419 4.8E-51 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VIBNI_B1745 eab367840499cd0ecece286588902ac9 424 PIRSF PIRSF006054 1 424 8.6E-171 T 15-10-2018 IPR021144 Uncharacterised protein family UPF0597 VIBNI_A2055 3a72a3f0b359afdb05458b6de8fe6fd0 91 Gene3D G3DSA:3.10.20.30 6 89 2.3E-14 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A2055 3a72a3f0b359afdb05458b6de8fe6fd0 91 SUPERFAMILY SSF54292 14 83 6.55E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A2055 3a72a3f0b359afdb05458b6de8fe6fd0 91 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 34 42 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VIBNI_A2055 3a72a3f0b359afdb05458b6de8fe6fd0 91 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 73 8.3E-8 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 Pfam PF00005 ABC transporter 274 436 1.1E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 Gene3D G3DSA:3.40.50.300 1 240 1.7E-59 T 15-10-2018 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 Gene3D G3DSA:3.40.50.300 241 500 7.6E-37 T 15-10-2018 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 Pfam PF00005 ABC transporter 22 169 3.1E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 SUPERFAMILY SSF52540 257 494 4.34E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 SMART SM00382 283 485 0.28 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 SMART SM00382 30 218 1.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1039 1031cc87554d19e8cf3642850bd4b1e0 514 SUPERFAMILY SSF52540 4 227 1.25E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 SUPERFAMILY SSF53335 111 329 4.32E-16 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 Pfam PF13727 CoA-binding domain 70 239 2.7E-6 T 15-10-2018 VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 SUPERFAMILY SSF51735 282 594 4.41E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 Gene3D G3DSA:3.40.50.720 142 265 3.4E-24 T 15-10-2018 VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 Pfam PF02719 Polysaccharide biosynthesis protein 284 578 8.2E-127 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VIBNI_A3636 748fe619fdbb08b1dbfb9f6e3d064186 624 Gene3D G3DSA:3.40.50.720 280 611 2.8E-112 T 15-10-2018 VIBNI_A3026 08c680ddbcb30ca8d2c1e859c9d83968 517 Pfam PF00589 Phage integrase family 192 386 2.0E-6 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A3026 08c680ddbcb30ca8d2c1e859c9d83968 517 SUPERFAMILY SSF56349 186 389 4.12E-8 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A3026 08c680ddbcb30ca8d2c1e859c9d83968 517 Gene3D G3DSA:1.10.443.10 160 391 1.8E-9 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A1045 29954da18cdb7ff1fdfbaf58d7570920 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 81 1.7E-23 T 15-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VIBNI_A1045 29954da18cdb7ff1fdfbaf58d7570920 84 SUPERFAMILY SSF101744 1 83 1.88E-17 T 15-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VIBNI_A1045 29954da18cdb7ff1fdfbaf58d7570920 84 Gene3D G3DSA:2.30.30.400 2 84 2.4E-15 T 15-10-2018 IPR038626 Rof-like superfamily VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Gene3D G3DSA:3.40.50.2300 1 117 6.4E-12 T 15-10-2018 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Gene3D G3DSA:1.10.8.60 309 385 1.8E-25 T 15-10-2018 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 SUPERFAMILY SSF46689 349 489 2.6E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Pfam PF00158 Sigma-54 interaction domain 137 303 2.8E-73 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 SMART SM00382 157 301 3.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 SUPERFAMILY SSF52540 137 378 1.09E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 9.4E-30 T 15-10-2018 IPR010518 Flagellar regulatory FleQ VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Gene3D G3DSA:3.40.50.300 126 308 1.2E-67 T 15-10-2018 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Gene3D G3DSA:1.10.10.60 424 490 2.7E-13 T 15-10-2018 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 489 1.9E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 469 1.9E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A0719 a916dc724499cf0661f70c3660208555 490 Pfam PF02954 Bacterial regulatory protein, Fis family 446 486 3.4E-15 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 Gene3D G3DSA:3.40.1260.20 403 489 3.9E-7 T 15-10-2018 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 Gene3D G3DSA:2.40.50.140 31 127 5.6E-32 T 15-10-2018 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 SMART SM00316 37 122 8.6E-10 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 Pfam PF10150 Ribonuclease E/G family 124 393 8.4E-103 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.3E-171 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 Pfam PF00575 S1 RNA binding domain 38 109 1.5E-5 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2982 d65412bd07581e7f4267bb270a57f126 489 SUPERFAMILY SSF50249 39 128 1.99E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 Gene3D G3DSA:3.20.20.70 1 209 2.3E-77 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 2.2E-84 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 SUPERFAMILY SSF51569 4 208 7.14E-68 T 15-10-2018 VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 Pfam PF01081 KDPG and KHG aldolase 4 198 9.0E-79 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 15-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_B2050 d4a4597256fc214329a7346885664a37 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_A1828 9d7d0c08d64210e3dcb9c80a33b39f3e 159 Pfam PF00583 Acetyltransferase (GNAT) family 29 146 2.6E-15 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1828 9d7d0c08d64210e3dcb9c80a33b39f3e 159 SUPERFAMILY SSF55729 4 158 1.8E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1828 9d7d0c08d64210e3dcb9c80a33b39f3e 159 Gene3D G3DSA:3.40.630.30 6 158 1.3E-35 T 15-10-2018 VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 SMART SM00382 26 205 3.8E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 SUPERFAMILY SSF52540 2 190 7.92E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 Gene3D G3DSA:3.40.50.300 1 200 8.5E-42 T 15-10-2018 VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 7.8E-79 T 15-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VIBNI_A0751 e88b31c6f9e3a23a4bbd755663f1c269 205 Pfam PF00005 ABC transporter 18 158 4.6E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3613 4a17177839484d5cf8256aad88d514b3 205 SUPERFAMILY SSF46785 2 183 6.59E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3613 4a17177839484d5cf8256aad88d514b3 205 Pfam PF08279 HTH domain 6 47 7.0E-5 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 VIBNI_A3613 4a17177839484d5cf8256aad88d514b3 205 Gene3D G3DSA:1.10.10.10 2 88 8.4E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2693 355c8366f82fcc867afff94faa230b75 411 Pfam PF01547 Bacterial extracellular solute-binding protein 43 329 6.8E-44 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A2693 355c8366f82fcc867afff94faa230b75 411 Gene3D G3DSA:3.40.190.10 149 402 5.1E-81 T 15-10-2018 VIBNI_A2693 355c8366f82fcc867afff94faa230b75 411 SUPERFAMILY SSF53850 32 404 7.91E-74 T 15-10-2018 VIBNI_A2693 355c8366f82fcc867afff94faa230b75 411 Gene3D G3DSA:3.40.190.10 54 372 5.1E-81 T 15-10-2018 VIBNI_A3714 10a4bf57fca0423398cfbf54121682a2 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 120 2.9E-4 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A3714 10a4bf57fca0423398cfbf54121682a2 128 Gene3D G3DSA:3.30.720.120 4 54 1.6E-7 T 15-10-2018 VIBNI_A3714 10a4bf57fca0423398cfbf54121682a2 128 Gene3D G3DSA:3.30.720.110 72 126 1.4E-15 T 15-10-2018 VIBNI_A3714 10a4bf57fca0423398cfbf54121682a2 128 SUPERFAMILY SSF54593 8 125 7.65E-18 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 Gene3D G3DSA:2.60.120.280 42 186 1.0E-6 T 15-10-2018 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 Gene3D G3DSA:1.10.10.60 191 297 1.3E-24 T 15-10-2018 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 SUPERFAMILY SSF51215 35 182 1.02E-10 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 Pfam PF02311 AraC-like ligand binding domain 50 135 8.1E-6 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 Pfam PF12833 Helix-turn-helix domain 215 293 3.6E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 SMART SM00342 209 292 2.5E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0609 57157419950486b5c6e95ba80a461402 300 SUPERFAMILY SSF46689 245 294 2.87E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1390 5ce632c18c16ed0d23de2222b75aa592 380 PIRSF PIRSF029172 1 380 1.9E-166 T 15-10-2018 IPR027020 Protein ynjB VIBNI_A1390 5ce632c18c16ed0d23de2222b75aa592 380 Gene3D G3DSA:3.40.190.10 67 354 8.7E-21 T 15-10-2018 VIBNI_A1390 5ce632c18c16ed0d23de2222b75aa592 380 Gene3D G3DSA:3.40.190.10 152 377 8.7E-21 T 15-10-2018 VIBNI_A1390 5ce632c18c16ed0d23de2222b75aa592 380 Pfam PF13416 Bacterial extracellular solute-binding protein 55 351 1.1E-21 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1390 5ce632c18c16ed0d23de2222b75aa592 380 SUPERFAMILY SSF53850 32 378 8.03E-40 T 15-10-2018 VIBNI_A2161 b3502a4092b84dbd5830e71cf08bd6fb 285 Gene3D G3DSA:2.60.120.10 15 122 3.4E-15 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2161 b3502a4092b84dbd5830e71cf08bd6fb 285 PIRSF PIRSF036628 2 275 2.7E-50 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VIBNI_A2161 b3502a4092b84dbd5830e71cf08bd6fb 285 SUPERFAMILY SSF51182 16 255 2.08E-36 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A2161 b3502a4092b84dbd5830e71cf08bd6fb 285 Gene3D G3DSA:2.60.120.10 123 273 6.2E-43 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2161 b3502a4092b84dbd5830e71cf08bd6fb 285 Pfam PF04962 KduI/IolB family 10 269 2.1E-75 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_A1450 17c1efd8bc0b2d2db9c2656ca821482f 346 Pfam PF00665 Integrase core domain 161 283 2.0E-21 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A1450 17c1efd8bc0b2d2db9c2656ca821482f 346 Pfam PF13551 Winged helix-turn helix 11 74 7.6E-20 T 15-10-2018 VIBNI_A1450 17c1efd8bc0b2d2db9c2656ca821482f 346 Gene3D G3DSA:3.30.420.10 161 327 2.6E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1450 17c1efd8bc0b2d2db9c2656ca821482f 346 SUPERFAMILY SSF53098 160 333 5.42E-38 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1450 17c1efd8bc0b2d2db9c2656ca821482f 346 SUPERFAMILY SSF46689 18 113 2.87E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3804 9c092af5110feecd939724b225996536 723 Gene3D G3DSA:3.40.50.300 10 272 5.5E-98 T 15-10-2018 VIBNI_A3804 9c092af5110feecd939724b225996536 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 6.0E-80 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_A3804 9c092af5110feecd939724b225996536 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.7E-74 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_A3804 9c092af5110feecd939724b225996536 723 Gene3D G3DSA:3.40.50.300 281 636 4.5E-133 T 15-10-2018 VIBNI_A3804 9c092af5110feecd939724b225996536 723 Gene3D G3DSA:1.10.486.10 382 538 4.5E-133 T 15-10-2018 VIBNI_A3804 9c092af5110feecd939724b225996536 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 15-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VIBNI_A3804 9c092af5110feecd939724b225996536 723 SUPERFAMILY SSF52540 7 642 1.4E-178 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3804 9c092af5110feecd939724b225996536 723 Gene3D G3DSA:1.10.10.160 114 187 5.5E-98 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 6.2E-295 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 SUPERFAMILY SSF51338 424 477 5.18E-6 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 15-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 SUPERFAMILY SSF51556 130 567 6.58E-201 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 Gene3D G3DSA:2.30.40.10 4 480 2.2E-302 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 57.116 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 15-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 Pfam PF01979 Amidohydrolase family 125 453 2.6E-84 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 SUPERFAMILY SSF51338 2 178 1.49E-64 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.8E-56 T 15-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 6.8E-35 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 6.8E-35 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 6.8E-35 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 6.8E-35 T 15-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VIBNI_B0598 b56f2370ba243ab5208a2105ff83e483 567 Gene3D G3DSA:3.20.20.140 129 567 2.2E-302 T 15-10-2018 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 Gene3D G3DSA:3.40.50.2300 12 163 4.4E-15 T 15-10-2018 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 SUPERFAMILY SSF109604 324 494 1.23E-38 T 15-10-2018 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 Pfam PF00072 Response regulator receiver domain 26 135 1.4E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 SUPERFAMILY SSF52172 24 153 3.42E-11 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 Pfam PF11849 Domain of unknown function (DUF3369) 146 308 9.1E-30 T 15-10-2018 IPR021800 Domain of unknown function DUF3369 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 SMART SM00471 326 463 2.2E-9 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 Gene3D G3DSA:1.10.3210.10 305 505 1.0E-72 T 15-10-2018 VIBNI_B1645 b9fc14b878cb649027ad66a7c1f5fb2f 505 Pfam PF01966 HD domain 332 453 1.3E-21 T 15-10-2018 IPR006674 HD domain VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 Pfam PF00005 ABC transporter 272 424 2.4E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 Gene3D G3DSA:3.40.50.300 261 492 1.2E-44 T 15-10-2018 VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 SUPERFAMILY SSF52540 266 483 7.88E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 SMART SM00382 30 226 3.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 SMART SM00382 280 473 1.9E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 SUPERFAMILY SSF52540 4 232 1.33E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 Pfam PF00005 ABC transporter 21 172 4.8E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0469 c0df86f0f12b08060d637ca4e91006c7 493 Gene3D G3DSA:3.40.50.300 1 240 5.0E-51 T 15-10-2018 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Gene3D G3DSA:1.10.1740.10 6 88 1.5E-27 T 15-10-2018 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 63.204 T 15-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Gene3D G3DSA:1.20.140.160 90 239 9.5E-47 T 15-10-2018 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 207 233 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.2E-12 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.2E-12 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.2E-12 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.2E-12 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 SUPERFAMILY SSF88659 165 241 3.36E-20 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 237 1.5E-31 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Pfam PF04542 Sigma-70 region 2 19 91 1.1E-15 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 SUPERFAMILY SSF88659 92 167 4.8E-17 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Pfam PF04539 Sigma-70 region 3 100 153 6.9E-13 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 PIRSF PIRSF000770 5 241 2.9E-38 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 Pfam PF04545 Sigma-70, region 4 186 235 8.7E-19 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 7.5E-87 T 15-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0741 d708964e7b60655fc9f4c766c25beb88 244 SUPERFAMILY SSF88946 7 91 4.32E-23 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B2114 b58b30f0d507e16b03e2ceefd4b7c16f 175 SUPERFAMILY SSF55068 3 166 3.79E-69 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B2114 b58b30f0d507e16b03e2ceefd4b7c16f 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 153 7.7E-57 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B2114 b58b30f0d507e16b03e2ceefd4b7c16f 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.251 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B2114 b58b30f0d507e16b03e2ceefd4b7c16f 175 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 1.5E-60 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B2114 b58b30f0d507e16b03e2ceefd4b7c16f 175 Gene3D G3DSA:3.30.1060.10 1 163 2.0E-65 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A3488 f92d623665a4aa87d36a0b34537107e8 312 Gene3D G3DSA:1.10.3720.10 86 306 1.4E-24 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3488 f92d623665a4aa87d36a0b34537107e8 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 2.3E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3488 f92d623665a4aa87d36a0b34537107e8 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 3.2E-9 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_A3488 f92d623665a4aa87d36a0b34537107e8 312 SUPERFAMILY SSF161098 93 294 8.9E-25 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3165 c5203cbfda2585814ec9a2132c21d876 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.0E-25 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3165 c5203cbfda2585814ec9a2132c21d876 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.903 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VIBNI_A3165 c5203cbfda2585814ec9a2132c21d876 101 SUPERFAMILY SSF57716 2 101 4.99E-37 T 15-10-2018 VIBNI_A3165 c5203cbfda2585814ec9a2132c21d876 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 15-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3165 c5203cbfda2585814ec9a2132c21d876 101 Gene3D G3DSA:4.10.830.10 41 101 1.0E-22 T 15-10-2018 VIBNI_A1764 aafd21139a7c6ad41bb7a935b78a51cc 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A1764 aafd21139a7c6ad41bb7a935b78a51cc 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 6.7E-57 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A1764 aafd21139a7c6ad41bb7a935b78a51cc 260 Gene3D G3DSA:3.90.226.10 1 201 5.8E-65 T 15-10-2018 VIBNI_A1764 aafd21139a7c6ad41bb7a935b78a51cc 260 Gene3D G3DSA:1.10.12.10 202 260 2.0E-19 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VIBNI_A1764 aafd21139a7c6ad41bb7a935b78a51cc 260 SUPERFAMILY SSF52096 1 260 2.8E-84 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A1373 78fc0696de2ebd7a263bace9268822d9 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 2.1E-148 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VIBNI_A1373 78fc0696de2ebd7a263bace9268822d9 310 SUPERFAMILY SSF53335 13 288 3.91E-49 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1373 78fc0696de2ebd7a263bace9268822d9 310 Gene3D G3DSA:3.40.50.150 91 309 1.7E-43 T 15-10-2018 VIBNI_B0856 fed5372748ab650b50b8a036112d7962 198 Gene3D G3DSA:3.80.10.10 21 194 1.5E-6 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily VIBNI_A1016 b55010674faca720f3bf2e4f1c8f56ff 281 Pfam PF07859 alpha/beta hydrolase fold 57 239 8.6E-16 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 VIBNI_A1016 b55010674faca720f3bf2e4f1c8f56ff 281 SUPERFAMILY SSF53474 15 248 6.12E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1016 b55010674faca720f3bf2e4f1c8f56ff 281 Gene3D G3DSA:3.40.50.1820 18 268 2.2E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 SMART SM00382 27 217 1.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.4E-88 T 15-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 Gene3D G3DSA:3.40.50.300 1 223 7.2E-60 T 15-10-2018 VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 SUPERFAMILY SSF52540 1 220 2.66E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 Pfam PF00005 ABC transporter 18 165 3.7E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3738 174c7645dd9eb0a9cd74921ccb88fa6d 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1211 1.7E-123 T 15-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SUPERFAMILY SSF47644 655 741 6.41E-30 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:3.10.196.10 910 1226 8.1E-146 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:1.10.288.10 939 1095 8.1E-146 T 15-10-2018 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SUPERFAMILY SSF51717 358 632 3.79E-87 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SUPERFAMILY SSF56507 904 1226 3.4E-130 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:3.20.20.330 3 340 1.1E-124 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Pfam PF00809 Pterin binding enzyme 362 600 4.0E-59 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Pfam PF02574 Homocysteine S-methyltransferase 20 324 4.8E-79 T 15-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SUPERFAMILY SSF52242 746 896 2.88E-45 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 PIRSF PIRSF000381 4 1198 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SUPERFAMILY SSF82282 9 401 6.8E-116 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:1.10.1240.10 651 739 8.2E-41 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 TIGRFAM TIGR02082 metH: methionine synthase 15 1195 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 SMART SM01018 659 742 2.3E-44 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:3.40.50.280 746 897 2.9E-56 T 15-10-2018 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Gene3D G3DSA:3.20.20.20 342 644 4.3E-130 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Pfam PF02310 B12 binding domain 750 843 4.3E-18 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VIBNI_A3036 67d5e6544d5f1a693ee59f9873cc3a27 1226 Pfam PF02607 B12 binding domain 661 735 1.3E-26 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 SUPERFAMILY SSF47413 1 59 2.29E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 SUPERFAMILY SSF53822 60 331 5.69E-94 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Gene3D G3DSA:1.10.260.40 3 59 2.7E-24 T 15-10-2018 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 61.313 T 15-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 SMART SM00354 1 71 1.1E-37 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Gene3D G3DSA:3.40.50.2300 161 323 2.3E-91 T 15-10-2018 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.0E-42 T 15-10-2018 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 Gene3D G3DSA:3.40.50.2300 69 322 2.3E-91 T 15-10-2018 VIBNI_A2113 a20004782c99a49c0ef69c9ce68def17 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 15-10-2018 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 SMART SM00937 67 180 1.8E-68 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Pfam PF00472 RF-1 domain 218 323 1.7E-39 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Pfam PF03462 PCRF domain 13 205 6.7E-78 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Gene3D G3DSA:1.20.58.410 3 98 2.7E-9 T 15-10-2018 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Gene3D G3DSA:3.30.160.20 212 293 5.3E-94 T 15-10-2018 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.901 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.3E-170 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 Gene3D G3DSA:3.30.70.1660 115 342 5.3E-94 T 15-10-2018 VIBNI_A2680 42402cce6b516c915d5418337292781b 362 SUPERFAMILY SSF75620 12 355 9.03E-136 T 15-10-2018 VIBNI_A2014 3a8acf0254950a5b1285defadccc83e6 162 Pfam PF01047 MarR family 31 89 3.9E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A2014 3a8acf0254950a5b1285defadccc83e6 162 SMART SM00347 24 124 6.4E-19 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A2014 3a8acf0254950a5b1285defadccc83e6 162 Gene3D G3DSA:1.10.10.10 2 135 1.7E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2014 3a8acf0254950a5b1285defadccc83e6 162 SUPERFAMILY SSF46785 5 140 2.44E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2653 1d1571e8ade09c24eaa7a3aae8f8ff94 145 SUPERFAMILY SSF49503 21 145 1.35E-40 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A2653 1d1571e8ade09c24eaa7a3aae8f8ff94 145 TIGRFAM TIGR02695 azurin: azurin 21 144 2.8E-54 T 15-10-2018 IPR014068 Azurin VIBNI_A2653 1d1571e8ade09c24eaa7a3aae8f8ff94 145 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 145 9.4E-25 T 15-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 VIBNI_A2653 1d1571e8ade09c24eaa7a3aae8f8ff94 145 Gene3D G3DSA:2.60.40.420 19 145 6.2E-42 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A2653 1d1571e8ade09c24eaa7a3aae8f8ff94 145 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 23 144 5.0E-37 T 15-10-2018 VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 SMART SM00382 281 484 4.7E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 SMART SM00382 32 217 3.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 SUPERFAMILY SSF52540 254 487 2.09E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 Gene3D G3DSA:3.40.50.300 1 235 3.9E-56 T 15-10-2018 VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 Pfam PF00005 ABC transporter 23 169 1.2E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 Pfam PF00005 ABC transporter 273 427 1.5E-18 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 SUPERFAMILY SSF52540 6 222 6.97E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1795 15cb8a76c2475dae0ee285ee10800745 504 Gene3D G3DSA:3.40.50.300 262 503 3.4E-42 T 15-10-2018 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Gene3D G3DSA:1.20.120.960 40 148 2.5E-13 T 15-10-2018 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 561 3.7E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 SMART SM00304 176 228 2.1E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Pfam PF00672 HAMP domain 176 223 8.0E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Gene3D G3DSA:1.10.287.130 173 271 5.1E-8 T 15-10-2018 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 SUPERFAMILY SSF55874 442 559 1.7E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Gene3D G3DSA:3.30.565.10 433 569 5.6E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 SUPERFAMILY SSF158472 176 225 4.84E-8 T 15-10-2018 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Pfam PF07730 Histidine kinase 365 432 2.4E-15 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 PIRSF PIRSF003167 289 571 6.3E-100 T 15-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 PIRSF PIRSF003167 2 299 6.8E-74 T 15-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 130 4.9E-24 T 15-10-2018 IPR029095 NarX-like, N-terminal VIBNI_B1298 4caf0bf95a756522892b68046bafb0e0 572 SMART SM00387 473 566 9.5E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 141 4.8E-11 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 1.2E-51 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 Gene3D G3DSA:1.20.120.910 18 148 2.4E-37 T 15-10-2018 VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 PRINTS PR00618 DksA/TraR zinc finger signature 124 136 9.8E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 PRINTS PR00618 DksA/TraR zinc finger signature 112 123 9.8E-5 T 15-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 30.787 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 15-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 SUPERFAMILY SSF109635 8 108 2.75E-38 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily VIBNI_A2847 ad68a5ee52eee58db076fbdd3d3c7a2e 149 SUPERFAMILY SSF57716 109 147 3.85E-10 T 15-10-2018 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 SUPERFAMILY SSF116734 7 195 1.49E-31 T 15-10-2018 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 Pfam PF01420 Type I restriction modification DNA specificity domain 6 182 2.7E-13 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 Pfam PF01420 Type I restriction modification DNA specificity domain 216 365 5.8E-6 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 SUPERFAMILY SSF116734 209 407 1.55E-28 T 15-10-2018 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:3.90.220.20 220 361 1.8E-62 T 15-10-2018 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:3.90.220.20 7 407 1.8E-62 T 15-10-2018 VIBNI_A2020 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:1.10.287.1120 150 404 1.8E-62 T 15-10-2018 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 SUPERFAMILY SSF116734 7 195 1.49E-31 T 15-10-2018 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 Pfam PF01420 Type I restriction modification DNA specificity domain 6 182 2.7E-13 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 Pfam PF01420 Type I restriction modification DNA specificity domain 216 365 5.8E-6 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 SUPERFAMILY SSF116734 209 407 1.55E-28 T 15-10-2018 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:3.90.220.20 220 361 1.8E-62 T 15-10-2018 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:3.90.220.20 7 407 1.8E-62 T 15-10-2018 VIBNI_A3442 e063bb586f79ecd8716514e7358779a5 409 Gene3D G3DSA:1.10.287.1120 150 404 1.8E-62 T 15-10-2018 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 Gene3D G3DSA:3.90.1150.10 39 444 6.6E-145 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 PIRSF PIRSF000521 22 154 3.1E-6 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 PIRSF PIRSF000521 203 452 2.6E-17 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 Gene3D G3DSA:3.40.640.10 75 355 6.6E-145 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 Pfam PF00202 Aminotransferase class-III 37 449 9.8E-89 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 261 298 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A2099 9213232671d3652b4fc600a701028ef0 454 SUPERFAMILY SSF53383 26 451 1.56E-117 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1908 aa6b75cd8bf2e605acb4f33d7c11d347 318 SUPERFAMILY SSF53850 49 283 1.93E-10 T 15-10-2018 VIBNI_B1908 aa6b75cd8bf2e605acb4f33d7c11d347 318 Gene3D G3DSA:3.40.190.10 123 244 3.6E-87 T 15-10-2018 VIBNI_B1908 aa6b75cd8bf2e605acb4f33d7c11d347 318 PIRSF PIRSF017082 1 318 1.4E-76 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_B1908 aa6b75cd8bf2e605acb4f33d7c11d347 318 Gene3D G3DSA:3.40.190.150 26 305 3.6E-87 T 15-10-2018 VIBNI_B1908 aa6b75cd8bf2e605acb4f33d7c11d347 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 316 5.8E-65 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_A0714 bda8160c086bfd66bf0f8a89b0480fb2 136 SUPERFAMILY SSF160214 46 134 1.83E-22 T 15-10-2018 IPR035924 FlaG-like superfamily VIBNI_A0714 bda8160c086bfd66bf0f8a89b0480fb2 136 Pfam PF03646 FlaG protein 44 134 1.2E-22 T 15-10-2018 IPR005186 FlaG protein VIBNI_A0714 bda8160c086bfd66bf0f8a89b0480fb2 136 Gene3D G3DSA:3.30.160.170 35 133 1.2E-16 T 15-10-2018 IPR035924 FlaG-like superfamily VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 SUPERFAMILY SSF55811 218 345 4.51E-27 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Gene3D G3DSA:1.10.1670.10 7 208 2.2E-87 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 SMART SM00525 189 209 0.0013 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Gene3D G3DSA:1.10.340.30 19 130 2.2E-87 T 15-10-2018 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 SMART SM00478 37 188 2.3E-47 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Gene3D G3DSA:3.90.79.10 221 346 1.7E-14 T 15-10-2018 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 271 1.4E-126 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Pfam PF00633 Helix-hairpin-helix motif 97 125 2.4E-6 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 5.5E-21 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 Pfam PF14815 NUDIX domain 232 343 8.9E-23 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VIBNI_A0046 ae1a7a982644c94f0a79d0bcca9a10bf 350 SUPERFAMILY SSF48150 3 223 8.48E-75 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Gene3D G3DSA:3.30.559.30 799 1050 3.3E-62 T 15-10-2018 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SUPERFAMILY SSF47336 440 505 5.76E-13 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 ProSitePatterns PS00012 Phosphopantetheine attachment site. 465 480 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SUPERFAMILY SSF52777 802 1053 1.33E-29 T 15-10-2018 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Gene3D G3DSA:1.10.1200.10 428 512 3.8E-17 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Gene3D G3DSA:1.10.1200.10 515 597 6.0E-18 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SUPERFAMILY SSF52777 21 166 6.89E-13 T 15-10-2018 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SUPERFAMILY SSF52777 616 795 3.71E-32 T 15-10-2018 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Pfam PF00668 Condensation domain 18 178 5.1E-10 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Pfam PF00668 Condensation domain 613 1050 1.5E-47 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SUPERFAMILY SSF47336 521 591 1.44E-14 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Pfam PF00550 Phosphopantetheine attachment site 529 591 1.2E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Pfam PF00550 Phosphopantetheine attachment site 451 505 2.2E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SMART SM00823 Phosphopantetheine attachment site 445 510 0.0071 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 SMART SM00823 Phosphopantetheine attachment site 527 595 0.073 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 ProSitePatterns PS00012 Phosphopantetheine attachment site. 551 566 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Gene3D G3DSA:3.30.559.10 22 170 1.3E-11 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0629 ae2b7008d7ba5e7c0255ee65b934713b 1071 Gene3D G3DSA:3.30.559.10 615 996 3.3E-62 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 SUPERFAMILY SSF55073 344 512 3.45E-38 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 SMART SM00267 328 510 1.5E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 506 7.3E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 508 3.5E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 SMART SM00052 520 763 9.9E-78 T 15-10-2018 IPR001633 EAL domain VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 Gene3D G3DSA:3.30.70.270 337 521 1.9E-48 T 15-10-2018 VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 Gene3D G3DSA:1.20.1480.50 245 336 2.0E-5 T 15-10-2018 VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 Pfam PF00563 EAL domain 526 758 1.9E-65 T 15-10-2018 IPR001633 EAL domain VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 Gene3D G3DSA:3.20.20.450 522 771 1.5E-75 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0382 0acea32ef196e1da71aebd929781076b 775 SUPERFAMILY SSF141868 525 770 4.71E-70 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0176 7efad03044973857237ceff3d5aded58 200 Pfam PF04994 TfoX C-terminal domain 111 189 5.0E-11 T 15-10-2018 IPR007077 TfoX, C-terminal VIBNI_B0176 7efad03044973857237ceff3d5aded58 200 SUPERFAMILY SSF159894 13 102 1.99E-14 T 15-10-2018 VIBNI_B0176 7efad03044973857237ceff3d5aded58 200 Gene3D G3DSA:3.30.1460.30 3 105 5.7E-15 T 15-10-2018 VIBNI_B0176 7efad03044973857237ceff3d5aded58 200 Gene3D G3DSA:1.10.150.20 109 198 3.0E-8 T 15-10-2018 VIBNI_B0176 7efad03044973857237ceff3d5aded58 200 Pfam PF04993 TfoX N-terminal domain 13 103 9.6E-19 T 15-10-2018 IPR007076 TfoX, N-terminal VIBNI_B0475 23f4c3a4e9b28bc61f0d555c861180e9 172 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 154 4.4E-22 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 Gene3D G3DSA:2.60.40.10 573 659 4.3E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SMART SM00495 711 754 2.5E-9 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SMART SM00495 664 706 8.6E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SUPERFAMILY SSF49299 572 658 4.71E-9 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 Gene3D G3DSA:2.10.10.20 664 704 8.9E-13 T 15-10-2018 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 Gene3D G3DSA:2.10.10.20 711 753 9.6E-12 T 15-10-2018 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SUPERFAMILY SSF51055 652 704 1.57E-10 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SUPERFAMILY SSF51055 710 753 3.4E-10 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 SMART SM00089 573 659 7.2E-8 T 15-10-2018 IPR022409 PKD/Chitinase domain VIBNI_B2081 d8b7f626321f73aa13c00a85c86b8b9a 754 Gene3D G3DSA:2.60.40.10 481 572 3.1E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B2138 2d5b52d642d6880e4ad07f57297207aa 329 Pfam PF13407 Periplasmic binding protein domain 30 285 1.6E-55 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B2138 2d5b52d642d6880e4ad07f57297207aa 329 Gene3D G3DSA:3.40.50.2300 31 298 5.1E-91 T 15-10-2018 VIBNI_B2138 2d5b52d642d6880e4ad07f57297207aa 329 SUPERFAMILY SSF53822 26 298 1.11E-63 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B2138 2d5b52d642d6880e4ad07f57297207aa 329 Gene3D G3DSA:3.40.50.2300 128 265 5.1E-91 T 15-10-2018 VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 PIRSF PIRSF000450 1 309 2.4E-149 T 15-10-2018 IPR033752 MetA family VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 Gene3D G3DSA:3.40.50.880 1 301 3.9E-126 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.562 T 15-10-2018 IPR033752 MetA family VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-126 T 15-10-2018 VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 Pfam PF04204 Homoserine O-succinyltransferase 2 299 5.6E-136 T 15-10-2018 IPR033752 MetA family VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 SUPERFAMILY SSF52317 17 297 5.41E-103 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3039 aaf31603948fb28530a83ee41f6544c1 314 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 7.7E-163 T 15-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VIBNI_B1791 aac3da152bd3df86ff3b04fada1e4f6a 488 SUPERFAMILY SSF53850 34 466 2.52E-48 T 15-10-2018 VIBNI_B1791 aac3da152bd3df86ff3b04fada1e4f6a 488 Gene3D G3DSA:3.40.190.10 52 419 1.2E-61 T 15-10-2018 VIBNI_B1791 aac3da152bd3df86ff3b04fada1e4f6a 488 Gene3D G3DSA:3.40.190.10 149 458 1.2E-61 T 15-10-2018 VIBNI_B1791 aac3da152bd3df86ff3b04fada1e4f6a 488 Pfam PF01547 Bacterial extracellular solute-binding protein 51 371 4.0E-16 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 SUPERFAMILY SSF46785 3 112 2.31E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 Gene3D G3DSA:1.10.10.10 1 83 2.1E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.5E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 SUPERFAMILY SSF53850 89 290 1.67E-32 T 15-10-2018 VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 Gene3D G3DSA:3.40.190.290 91 295 1.8E-33 T 15-10-2018 VIBNI_B0209 4908f8fbb423ee2f87448c74873f3d6b 299 Pfam PF03466 LysR substrate binding domain 88 288 2.0E-33 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0216 1123ea998dbd9aee05a509d0d43b2fd0 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 2.5E-27 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 VIBNI_A0216 1123ea998dbd9aee05a509d0d43b2fd0 122 SUPERFAMILY SSF52980 8 112 2.84E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A0216 1123ea998dbd9aee05a509d0d43b2fd0 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 1.7E-35 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 VIBNI_A0216 1123ea998dbd9aee05a509d0d43b2fd0 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.031 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 VIBNI_A0216 1123ea998dbd9aee05a509d0d43b2fd0 122 Gene3D G3DSA:3.40.1350.10 13 122 4.8E-30 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VIBNI_B1010 534c3db91d7dbb1f3e5ef3c33408741a 293 Gene3D G3DSA:1.10.3720.10 50 291 9.8E-65 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1010 534c3db91d7dbb1f3e5ef3c33408741a 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 286 7.0E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1010 534c3db91d7dbb1f3e5ef3c33408741a 293 SUPERFAMILY SSF161098 56 278 1.06E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Gene3D G3DSA:2.170.120.12 53 178 2.3E-83 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 15-10-2018 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 15-10-2018 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Gene3D G3DSA:3.30.1360.10 17 229 2.3E-83 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 2.9E-24 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 1.1E-22 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 3.7E-111 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.607 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 SUPERFAMILY SSF56553 53 179 8.2E-41 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 SMART SM00662 23 235 1.3E-103 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_A3153 c80f5be37eb87842ae6800f07b2a715c 330 SUPERFAMILY SSF55257 7 234 7.75E-30 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VIBNI_B1359 efe36ad8f2d3961eaf35708d1b712568 322 Pfam PF04321 RmlD substrate binding domain 105 237 3.5E-5 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VIBNI_B1359 efe36ad8f2d3961eaf35708d1b712568 322 Gene3D G3DSA:3.40.50.720 14 311 1.0E-24 T 15-10-2018 VIBNI_B1359 efe36ad8f2d3961eaf35708d1b712568 322 Pfam PF13460 NAD(P)H-binding 20 88 2.0E-7 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_B1359 efe36ad8f2d3961eaf35708d1b712568 322 SUPERFAMILY SSF51735 14 315 2.99E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 SUPERFAMILY SSF53383 1 392 1.1E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 Pfam PF00155 Aminotransferase class I and II 27 389 3.5E-66 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 PRINTS PR00799 Aspartate aminotransferase signature 270 295 2.9E-28 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 PRINTS PR00799 Aspartate aminotransferase signature 172 191 2.9E-28 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 PRINTS PR00799 Aspartate aminotransferase signature 338 356 2.9E-28 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 PRINTS PR00799 Aspartate aminotransferase signature 203 215 2.9E-28 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 Gene3D G3DSA:3.40.640.10 45 312 3.0E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1168 3ece29e50bb766dba682cd0624a344a8 394 Gene3D G3DSA:3.90.1150.10 11 389 3.0E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B1570 9e25018e5d20a42b99bc30d46e00777a 160 Pfam PF04314 Copper chaperone PCu(A)C 33 137 4.3E-43 T 15-10-2018 IPR007410 Copper chaperone PCuAC VIBNI_B1570 9e25018e5d20a42b99bc30d46e00777a 160 SUPERFAMILY SSF110087 9 149 7.06E-50 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily VIBNI_B1570 9e25018e5d20a42b99bc30d46e00777a 160 Gene3D G3DSA:2.60.40.1890 36 152 6.9E-43 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 3.1E-61 T 15-10-2018 IPR000241 Putative RNA methylase domain VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 PIRSF PIRSF037618 1 708 1.6E-295 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Gene3D G3DSA:3.40.50.150 489 707 1.8E-74 T 15-10-2018 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 SUPERFAMILY SSF53335 140 371 9.57E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 15-10-2018 IPR000241 Putative RNA methylase domain VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 SUPERFAMILY SSF53335 400 706 3.43E-69 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 SMART SM00981 56 154 4.0E-20 T 15-10-2018 IPR004114 THUMP domain GO:0003723 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Gene3D G3DSA:3.30.2130.30 6 255 1.2E-135 T 15-10-2018 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Gene3D G3DSA:3.40.50.150 169 371 1.2E-135 T 15-10-2018 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 438 663 2.9E-22 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Gene3D G3DSA:3.30.750.80 397 488 1.9E-35 T 15-10-2018 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Pfam PF02926 THUMP domain 32 153 4.6E-13 T 15-10-2018 IPR004114 THUMP domain GO:0003723 VIBNI_A1785 0abd8e4a9b515982787d46a49da8ada2 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 707 31.549 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VIBNI_B1025 979cdb4ee8adf755bfc554407a5ed1e0 248 SUPERFAMILY SSF69572 4 247 4.71E-86 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VIBNI_B1025 979cdb4ee8adf755bfc554407a5ed1e0 248 Pfam PF00899 ThiF family 12 245 8.2E-67 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VIBNI_B1025 979cdb4ee8adf755bfc554407a5ed1e0 248 Gene3D G3DSA:3.40.50.720 4 248 3.8E-88 T 15-10-2018 VIBNI_B1025 979cdb4ee8adf755bfc554407a5ed1e0 248 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 4.0E-127 T 15-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 Gene3D G3DSA:1.10.10.10 120 177 2.5E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 Pfam PF08281 Sigma-70, region 4 121 171 1.8E-8 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 SUPERFAMILY SSF88946 1 105 1.54E-23 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 176 5.7E-24 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 SUPERFAMILY SSF88659 118 176 2.43E-10 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 Pfam PF04542 Sigma-70 region 2 24 91 3.2E-14 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A1949 79e2c8976a164eb6684d99ae8e77caa1 184 Gene3D G3DSA:1.10.1740.10 1 119 4.5E-25 T 15-10-2018 VIBNI_B0450 7a64e64ec8637450b1ae9b8f602ed975 389 Gene3D G3DSA:3.20.20.500 1 383 1.1E-164 T 15-10-2018 VIBNI_B0450 7a64e64ec8637450b1ae9b8f602ed975 389 Pfam PF06187 Protein of unknown function (DUF993) 4 387 7.5E-183 T 15-10-2018 IPR009334 Protein of unknown function DUF993 VIBNI_B0450 7a64e64ec8637450b1ae9b8f602ed975 389 SUPERFAMILY SSF51569 47 328 1.0E-14 T 15-10-2018 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 SMART SM00866 96 233 1.7E-31 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 Gene3D G3DSA:3.40.1410.10 94 229 9.6E-32 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 Gene3D G3DSA:1.10.10.10 6 74 3.7E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.3E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 9 238 9.2E-92 T 15-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 9.5E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 9.5E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 SMART SM00345 14 73 4.4E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 Pfam PF07702 UTRA domain 96 233 3.1E-33 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 SUPERFAMILY SSF64288 100 237 7.38E-38 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A1180 00235c1b6dc00e352af4ff382ee509bc 240 SUPERFAMILY SSF46785 3 77 5.53E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 222 5.0E-40 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 SUPERFAMILY SSF53681 1 115 9.48E-19 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 Gene3D G3DSA:3.40.50.1860 4 222 8.5E-60 T 15-10-2018 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 SUPERFAMILY SSF53681 117 226 5.49E-26 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 Gene3D G3DSA:3.40.50.1860 103 213 8.5E-60 T 15-10-2018 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 226 1.9E-37 T 15-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 VIBNI_B1414 c8c5f13d3f1cd66798523f99eeb75f4e 228 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 191 201 - T 15-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 260 274 - T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 Pfam PF00732 GMC oxidoreductase 5 302 4.0E-74 T 15-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 PIRSF PIRSF000137 1 541 9.0E-138 T 15-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 Pfam PF05199 GMC oxidoreductase 395 532 1.2E-34 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 SUPERFAMILY SSF54373 296 481 6.67E-37 T 15-10-2018 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 Gene3D G3DSA:3.30.560.10 44 476 3.6E-155 T 15-10-2018 VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 SUPERFAMILY SSF51905 1 539 7.03E-75 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2049 ecdbcbe13f6536e691c66f823889fc87 541 Gene3D G3DSA:3.50.50.60 5 537 3.6E-155 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 Pfam PF00171 Aldehyde dehydrogenase family 22 464 6.3E-150 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 SUPERFAMILY SSF53720 4 468 4.71E-151 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 Gene3D G3DSA:3.40.309.10 249 438 4.2E-162 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B1981 279a63aef99535c277783a60ecd56503 470 Gene3D G3DSA:3.40.605.10 22 464 4.2E-162 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 Gene3D G3DSA:3.40.50.2300 168 304 2.3E-49 T 15-10-2018 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 SUPERFAMILY SSF47413 8 66 1.37E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 Gene3D G3DSA:1.10.260.40 1 65 1.3E-16 T 15-10-2018 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 SMART SM00354 8 78 2.0E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 Gene3D G3DSA:3.40.50.2300 69 320 2.3E-49 T 15-10-2018 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 2.2E-11 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 SUPERFAMILY SSF53822 65 320 2.54E-41 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2069 41f1956724f6e7fc4921604b29333852 339 Pfam PF13377 Periplasmic binding protein-like domain 178 320 1.0E-20 T 15-10-2018 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 SUPERFAMILY SSF56300 4 252 1.15E-56 T 15-10-2018 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 Pfam PF00149 Calcineurin-like phosphoesterase 5 157 1.7E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 47.347 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 5.1E-112 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 PIRSF PIRSF000903 1 270 8.1E-118 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VIBNI_A2920 b761f04c070570d8b0d293d5e9b165ca 270 Gene3D G3DSA:3.60.21.10 2 269 2.6E-77 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B1889 e0fa64b6d430a1a7990be79f9dbda26a 179 Pfam PF05870 Phenolic acid decarboxylase (PAD) 8 164 1.8E-78 T 15-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VIBNI_B1889 e0fa64b6d430a1a7990be79f9dbda26a 179 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 8 157 4.0E-70 T 15-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VIBNI_B1889 e0fa64b6d430a1a7990be79f9dbda26a 179 SUPERFAMILY SSF50814 2 165 3.07E-67 T 15-10-2018 IPR012674 Calycin VIBNI_B1889 e0fa64b6d430a1a7990be79f9dbda26a 179 PIRSF PIRSF011561 1 175 1.7E-82 T 15-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VIBNI_B1889 e0fa64b6d430a1a7990be79f9dbda26a 179 Gene3D G3DSA:2.40.128.20 1 167 3.4E-74 T 15-10-2018 IPR012674 Calycin VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 Gene3D G3DSA:3.30.70.1400 29 115 3.6E-37 T 15-10-2018 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 Gene3D G3DSA:2.40.30.160 190 311 9.7E-35 T 15-10-2018 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 SUPERFAMILY SSF103025 19 236 7.85E-54 T 15-10-2018 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 PIRSF PIRSF006487 158 267 9.9 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 PIRSF PIRSF006487 18 155 6.9E-6 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 Pfam PF01571 Aminomethyltransferase folate-binding domain 23 134 1.1E-5 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 182 245 1.7E-23 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 315 40.548 T 15-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 SUPERFAMILY SSF101790 237 319 1.96E-18 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VIBNI_A0102 52f7da865f01cc8383244c8e5be25349 321 Gene3D G3DSA:3.30.70.1630 26 187 3.6E-37 T 15-10-2018 VIBNI_A2602 840cfb4a801afb70ce54a933a4ec7cac 287 Gene3D G3DSA:1.10.10.10 5 107 8.3E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2602 840cfb4a801afb70ce54a933a4ec7cac 287 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 2.0E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2602 840cfb4a801afb70ce54a933a4ec7cac 287 SUPERFAMILY SSF46894 11 108 1.79E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2602 840cfb4a801afb70ce54a933a4ec7cac 287 SMART SM00862 30 107 2.0E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.5E-33 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82693 46 127 2.33E-20 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82693 137 328 7.59E-23 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 15-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.70.1430 562 664 1.4E-272 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82714 716 800 1.96E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.2090.10 182 274 1.4E-272 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82866 294 498 2.75E-42 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.70.1320 135 328 1.4E-272 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82714 185 269 3.27E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 5.2E-246 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 SUPERFAMILY SSF82866 798 1037 1.44E-51 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.2090.10 716 804 1.4E-272 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:1.20.1640.10 509 1030 1.4E-272 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.70.1440 665 862 1.4E-272 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:3.30.70.1430 42 812 1.4E-272 T 15-10-2018 VIBNI_B0243 75b7b92adac1605b717cdd87733576ca 1040 Gene3D G3DSA:1.20.1640.10 15 508 1.4E-272 T 15-10-2018 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 PRINTS PR00773 GrpE protein signature 151 166 1.2E-28 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 PRINTS PR00773 GrpE protein signature 68 84 1.2E-28 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 PRINTS PR00773 GrpE protein signature 96 111 1.2E-28 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 PRINTS PR00773 GrpE protein signature 178 197 1.2E-28 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 Hamap MF_01151 Protein GrpE [grpE]. 2 199 22.684 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 Pfam PF01025 GrpE 36 199 4.9E-54 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 Gene3D G3DSA:3.90.20.20 36 142 1.2E-32 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 SUPERFAMILY SSF51064 144 199 5.23E-20 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 SUPERFAMILY SSF58014 45 143 1.83E-29 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 Gene3D G3DSA:2.30.22.10 143 199 1.2E-25 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VIBNI_A0628 37182ae5df78ba7f17acd16e13328bac 199 ProSitePatterns PS01071 grpE protein signature. 154 197 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 Gene3D G3DSA:3.40.50.720 146 282 5.5E-85 T 15-10-2018 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 Gene3D G3DSA:3.90.180.10 13 318 5.5E-85 T 15-10-2018 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 Pfam PF00107 Zinc-binding dehydrogenase 171 298 1.2E-20 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 SMART SM00829 7 308 3.7E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 SUPERFAMILY SSF51735 134 302 8.32E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 5.1E-33 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B2042 260dfe3335dc38d420e4fbc3af9a3c8a 338 SUPERFAMILY SSF50129 1 168 4.87E-50 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 Pfam PF08238 Sel1 repeat 110 144 1.3E-4 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 Pfam PF08238 Sel1 repeat 75 107 0.028 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 Gene3D G3DSA:1.25.40.10 41 212 3.6E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 SUPERFAMILY SSF81901 66 175 7.06E-21 T 15-10-2018 VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 SMART SM00671 73 108 0.016 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 SMART SM00671 109 144 3.2E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A3212 8c3651a05ddfd0cebafd1bd244c436d8 212 SMART SM00671 145 180 140.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 Gene3D G3DSA:1.10.287.470 113 172 8.1E-51 T 15-10-2018 VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 Gene3D G3DSA:2.40.50.100 78 206 8.1E-51 T 15-10-2018 VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 Gene3D G3DSA:2.40.420.20 287 355 8.1E-51 T 15-10-2018 VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 SUPERFAMILY SSF111369 68 282 2.75E-29 T 15-10-2018 VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 Gene3D G3DSA:2.40.30.170 67 286 8.1E-51 T 15-10-2018 VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 271 4.0E-21 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A2815 2b8b2a7e0cd3e20e0d710d51f6e89695 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 356 5.4E-47 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 SMART SM00267 470 640 1.2E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 Gene3D G3DSA:1.25.40.10 45 294 1.8E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 SUPERFAMILY SSF55073 486 639 5.18E-35 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 636 4.2E-34 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 Gene3D G3DSA:3.30.70.270 475 640 2.0E-41 T 15-10-2018 VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 638 1.0E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 SUPERFAMILY SSF48452 248 404 1.23E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 SUPERFAMILY SSF48452 95 290 3.31E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1374 c1220a316338b97a8c3c64dc9f3f74d8 641 Gene3D G3DSA:1.25.40.10 295 400 5.9E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 PRINTS PR00113 Alkaline phosphatase signature 154 174 1.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 PRINTS PR00113 Alkaline phosphatase signature 302 331 1.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 PRINTS PR00113 Alkaline phosphatase signature 216 226 1.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 PRINTS PR00113 Alkaline phosphatase signature 51 71 1.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 PRINTS PR00113 Alkaline phosphatase signature 107 122 1.5E-43 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 Pfam PF00245 Alkaline phosphatase 51 486 8.0E-129 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 SMART SM00098 52 487 1.9E-178 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 SUPERFAMILY SSF53649 29 486 4.47E-154 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A3590 f889e10018670809268fd1b9f8fb26cf 488 Gene3D G3DSA:3.40.720.10 21 488 1.4E-184 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 SUPERFAMILY SSF47323 344 453 1.44E-16 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 455 6.7E-121 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 236 257 2.8E-23 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 205 223 2.8E-23 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 2.8E-23 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 2.8E-23 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 SUPERFAMILY SSF52374 7 327 6.17E-74 T 15-10-2018 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 Gene3D G3DSA:3.40.50.620 5 319 8.9E-122 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 456 31.28 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 326 2.1E-92 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VIBNI_B0268 9e23f6e789ee91f3a2a52f44deb72cc9 458 Gene3D G3DSA:1.20.120.640 321 455 1.3E-15 T 15-10-2018 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 4.7E-154 T 15-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 Gene3D G3DSA:1.10.579.10 298 437 2.3E-51 T 15-10-2018 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 PRINTS PR00147 DNA photolyase signature 340 358 3.5E-12 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 PRINTS PR00147 DNA photolyase signature 379 393 3.5E-12 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 PRINTS PR00147 DNA photolyase signature 320 336 3.5E-12 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 Gene3D G3DSA:1.25.40.80 131 293 1.0E-43 T 15-10-2018 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 Pfam PF03441 FAD binding domain of DNA photolyase 273 417 3.9E-41 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 SUPERFAMILY SSF48173 196 420 1.7E-70 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 Gene3D G3DSA:3.40.50.620 1 121 2.9E-28 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 SUPERFAMILY SSF52425 4 179 6.41E-42 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VIBNI_A0453 b9221cdd74fba1988ef89334e018670e 444 Pfam PF00875 DNA photolyase 4 162 7.8E-32 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VIBNI_B1933 cd662586d4e6255747f007aecf9637a0 124 Gene3D G3DSA:3.10.450.50 2 116 2.9E-10 T 15-10-2018 VIBNI_B1933 cd662586d4e6255747f007aecf9637a0 124 Pfam PF14534 Domain of unknown function (DUF4440) 5 109 2.0E-12 T 15-10-2018 IPR027843 Domain of unknown function DUF4440 VIBNI_B1933 cd662586d4e6255747f007aecf9637a0 124 SUPERFAMILY SSF54427 2 117 1.66E-16 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0278 291daa3956012c3fee33b8b43e3a1d9d 426 Pfam PF01734 Patatin-like phospholipase 13 311 7.9E-28 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_B0278 291daa3956012c3fee33b8b43e3a1d9d 426 Gene3D G3DSA:3.40.1090.10 213 323 3.2E-19 T 15-10-2018 VIBNI_B0278 291daa3956012c3fee33b8b43e3a1d9d 426 SUPERFAMILY SSF52151 12 314 9.68E-28 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_B0278 291daa3956012c3fee33b8b43e3a1d9d 426 Gene3D G3DSA:3.40.1090.20 10 137 3.8E-22 T 15-10-2018 VIBNI_B1318 7d2c44f372a095c379d9310727e4e6c6 117 Pfam PF03795 YCII-related domain 1 110 1.2E-20 T 15-10-2018 IPR005545 YCII-related VIBNI_B1318 7d2c44f372a095c379d9310727e4e6c6 117 SUPERFAMILY SSF54909 1 110 7.69E-31 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1318 7d2c44f372a095c379d9310727e4e6c6 117 Gene3D G3DSA:3.30.70.1060 1 114 7.5E-37 T 15-10-2018 VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 Pfam PF06725 3D domain 272 348 1.8E-20 T 15-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 Gene3D G3DSA:2.40.40.10 51 348 1.3E-133 T 15-10-2018 IPR036908 RlpA-like domain superfamily VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 SUPERFAMILY SSF50685 21 349 2.69E-100 T 15-10-2018 IPR036908 RlpA-like domain superfamily VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 SMART SM00925 119 252 1.5E-60 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 Gene3D G3DSA:2.40.240.50 119 257 1.3E-133 T 15-10-2018 VIBNI_A0550 8b6b33040b8d767d847fc91693832ffb 367 Pfam PF03562 MltA specific insert domain 87 252 2.8E-38 T 15-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VIBNI_A1493 96b669fda7997106c7112cbc671c595c 259 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 259 46.146 T 15-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VIBNI_A1493 96b669fda7997106c7112cbc671c595c 259 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 11 246 7.3E-37 T 15-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VIBNI_A1493 96b669fda7997106c7112cbc671c595c 259 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 2.0E-51 T 15-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VIBNI_A3462 4ef1c3a9b3e8628cccbdb57a8f8f2677 302 Gene3D G3DSA:3.90.550.10 1 251 4.5E-52 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3462 4ef1c3a9b3e8628cccbdb57a8f8f2677 302 SUPERFAMILY SSF53448 1 269 7.24E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3462 4ef1c3a9b3e8628cccbdb57a8f8f2677 302 Pfam PF00535 Glycosyl transferase family 2 5 136 1.6E-22 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 SUPERFAMILY SSF63825 409 623 6.02E-22 T 15-10-2018 VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 Pfam PF01436 NHL repeat 447 473 1.2E-6 T 15-10-2018 IPR001258 NHL repeat GO:0005515 VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 SUPERFAMILY SSF63829 11 212 1.73E-18 T 15-10-2018 VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 Gene3D G3DSA:2.120.10.30 481 625 1.9E-26 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 Gene3D G3DSA:2.120.10.30 2 247 1.9E-24 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A1336 a3de6a6cee22dc84f53a2222a0aae9a8 626 Gene3D G3DSA:2.120.10.30 428 480 1.0E-8 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 Pfam PF01380 SIS domain 124 252 7.0E-25 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 SUPERFAMILY SSF53697 93 281 1.09E-39 T 15-10-2018 VIBNI_A1112 2ee2681068fa25fd4a1f82f504d634bc 284 Gene3D G3DSA:3.40.50.10490 94 277 1.2E-39 T 15-10-2018 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 249 370 1.2E-35 T 15-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 204 9.5E-27 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 PIRSF PIRSF036428 7 422 1.4E-104 T 15-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 Gene3D G3DSA:3.40.50.150 231 423 5.3E-63 T 15-10-2018 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 206 1.4E-50 T 15-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 SUPERFAMILY SSF53335 235 386 2.81E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 SUPERFAMILY SSF53790 11 220 1.06E-38 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 Gene3D G3DSA:3.40.1010.10 8 110 2.3E-17 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0074 289cebe5db2f14cb0cc81c8d5907f8b1 424 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 257 396 3.0E-6 T 15-10-2018 VIBNI_B1739 68085f32a8787e73a7ed8f67bcd8ee2b 309 Pfam PF00326 Prolyl oligopeptidase family 116 306 4.6E-9 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VIBNI_B1739 68085f32a8787e73a7ed8f67bcd8ee2b 309 SUPERFAMILY SSF53474 25 305 8.39E-25 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1739 68085f32a8787e73a7ed8f67bcd8ee2b 309 Gene3D G3DSA:3.40.50.1820 17 308 2.8E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 804 4.6E-71 T 15-10-2018 IPR009612 ImcF-related VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 SUPERFAMILY SSF52540 129 309 3.51E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 16 1172 0.0 T 15-10-2018 IPR017731 Type VI secretion system, IcmF VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 Pfam PF14331 ImcF-related N-terminal domain 194 450 8.0E-89 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1122 1.5E-59 T 15-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VIBNI_A1431 2343c9c280510f3426e0f0a5e14ccd90 1174 Gene3D G3DSA:3.40.50.300 126 319 3.6E-6 T 15-10-2018 VIBNI_A0608 964467c4dff30fb88cb90d6e9bd67ff9 375 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 262 269 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A0608 964467c4dff30fb88cb90d6e9bd67ff9 375 Gene3D G3DSA:3.30.1490.20 106 189 6.3E-11 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A0608 964467c4dff30fb88cb90d6e9bd67ff9 375 Gene3D G3DSA:3.40.50.20 7 105 6.3E-11 T 15-10-2018 VIBNI_A0608 964467c4dff30fb88cb90d6e9bd67ff9 375 Gene3D G3DSA:3.30.470.20 190 272 6.3E-11 T 15-10-2018 VIBNI_A0608 964467c4dff30fb88cb90d6e9bd67ff9 375 SUPERFAMILY SSF56059 109 279 1.16E-9 T 15-10-2018 VIBNI_A1632 e2cc4f9ae65ae53f0db82eb9225c5acb 134 SUPERFAMILY SSF55166 4 121 2.01E-27 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A1632 e2cc4f9ae65ae53f0db82eb9225c5acb 134 Gene3D G3DSA:3.30.1380.10 6 121 1.9E-20 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A1632 e2cc4f9ae65ae53f0db82eb9225c5acb 134 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 56 121 3.2E-16 T 15-10-2018 IPR039561 Peptidase M15C GO:0008233 VIBNI_B1089 fdba91a9a3760b55ed925051d8f9c549 147 Pfam PF03061 Thioesterase superfamily 56 132 4.5E-14 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VIBNI_B1089 fdba91a9a3760b55ed925051d8f9c549 147 Gene3D G3DSA:3.10.129.10 4 147 1.1E-54 T 15-10-2018 VIBNI_B1089 fdba91a9a3760b55ed925051d8f9c549 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 139 4.1E-35 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VIBNI_B1089 fdba91a9a3760b55ed925051d8f9c549 147 SUPERFAMILY SSF54637 7 142 1.87E-26 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 Pfam PF00005 ABC transporter 274 431 9.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 Pfam PF00005 ABC transporter 25 174 4.0E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 SUPERFAMILY SSF52540 241 492 4.92E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 Gene3D G3DSA:3.40.50.300 258 502 7.5E-40 T 15-10-2018 VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 SMART SM00382 34 222 5.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 SMART SM00382 283 488 1.2E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 SUPERFAMILY SSF52540 8 234 9.15E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0753 db07f2e46ccb48132c3bacc6e8daf0ac 514 Gene3D G3DSA:3.40.50.300 4 243 3.5E-57 T 15-10-2018 VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 372 1.7E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 SMART SM00448 2 115 3.1E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 Gene3D G3DSA:1.10.287.130 118 213 1.6E-7 T 15-10-2018 VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 Pfam PF00072 Response regulator receiver domain 5 115 3.9E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 Gene3D G3DSA:3.30.565.10 214 372 6.6E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 SUPERFAMILY SSF55874 220 372 4.58E-19 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 Gene3D G3DSA:3.40.50.2300 1 117 7.0E-34 T 15-10-2018 VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 SMART SM00387 261 374 4.1E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0498 465ad6362850ecac897c5214c3775efc 374 SUPERFAMILY SSF52172 2 131 1.85E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1005 6df92ecddcddab86319b5d68236f4b87 210 Pfam PF02630 SCO1/SenC 39 182 4.5E-34 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1005 6df92ecddcddab86319b5d68236f4b87 210 Gene3D G3DSA:3.40.30.10 33 204 1.8E-40 T 15-10-2018 VIBNI_A1005 6df92ecddcddab86319b5d68236f4b87 210 SUPERFAMILY SSF52833 41 201 2.01E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 Gene3D G3DSA:1.10.1040.10 163 290 9.4E-36 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 SUPERFAMILY SSF48179 164 288 6.57E-37 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 2.7E-48 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 SUPERFAMILY SSF51735 1 164 5.85E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 5.9E-30 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 Gene3D G3DSA:3.40.50.720 1 162 9.1E-51 T 15-10-2018 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 PIRSF PIRSF000103 1 291 1.8E-74 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_B0115 89d49b1ae015543435321fd2aa6679ed 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VIBNI_A2552 680faba11aac6d1a4c2378a68eb7c266 260 Gene3D G3DSA:3.40.50.300 2 235 3.2E-56 T 15-10-2018 VIBNI_A2552 680faba11aac6d1a4c2378a68eb7c266 260 SMART SM00382 29 199 3.8E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2552 680faba11aac6d1a4c2378a68eb7c266 260 Pfam PF00005 ABC transporter 20 148 2.8E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2552 680faba11aac6d1a4c2378a68eb7c266 260 SUPERFAMILY SSF52540 6 221 8.77E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Gene3D G3DSA:1.10.8.60 187 260 1.8E-31 T 15-10-2018 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 SMART SM00382 56 187 1.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 4.0E-34 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 SUPERFAMILY SSF46785 262 335 1.48E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.8E-149 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 337 184.288 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Gene3D G3DSA:1.10.10.10 262 337 2.2E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Gene3D G3DSA:3.40.50.300 25 186 7.0E-41 T 15-10-2018 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 SUPERFAMILY SSF52540 25 256 1.08E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 1.0E-117 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VIBNI_A2265 5e1d0bcfe5e7adc167c5c176c7866274 337 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 2.0E-37 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VIBNI_A1717 4b9ffc6827b5de4d7c769cd6f75eb0bf 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A1717 4b9ffc6827b5de4d7c769cd6f75eb0bf 202 SUPERFAMILY SSF54862 1 183 7.33E-48 T 15-10-2018 VIBNI_A1717 4b9ffc6827b5de4d7c769cd6f75eb0bf 202 Gene3D G3DSA:3.30.70.20 5 182 1.7E-35 T 15-10-2018 VIBNI_A1717 4b9ffc6827b5de4d7c769cd6f75eb0bf 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 3.1E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A1717 4b9ffc6827b5de4d7c769cd6f75eb0bf 202 Gene3D G3DSA:3.30.70.20 63 120 1.7E-35 T 15-10-2018 VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 Gene3D G3DSA:3.40.50.300 216 409 5.5E-51 T 15-10-2018 VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 SMART SM00490 257 341 5.1E-32 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 SUPERFAMILY SSF52540 76 358 1.08E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 SMART SM00487 22 224 2.6E-55 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 409 50.178 T 15-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.1E-46 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 Pfam PF00271 Helicase conserved C-terminal domain 235 341 4.3E-32 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0312 723cf4af185049d3ee05585386a9ad23 409 Gene3D G3DSA:3.40.50.300 1 210 5.9E-71 T 15-10-2018 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 SMART SM00359 284 367 1.6E-19 T 15-10-2018 IPR002478 PUA domain GO:0003723 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 Gene3D G3DSA:3.40.1160.10 4 272 2.5E-86 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 Pfam PF01472 PUA domain 284 358 5.3E-22 T 15-10-2018 IPR002478 PUA domain GO:0003723 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 6.1E-54 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 6.1E-54 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 6.1E-54 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 6.1E-54 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 6.1E-54 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 373 1.0E-148 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 PIRSF PIRSF000729 7 376 1.2E-136 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 SUPERFAMILY SSF88697 284 374 2.54E-24 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 Gene3D G3DSA:2.30.130.10 273 375 1.3E-31 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 Pfam PF00696 Amino acid kinase family 13 241 4.5E-43 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 SUPERFAMILY SSF53633 12 263 2.09E-64 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0650 196e56aa2263d38cfa47bfac7abe6b05 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 266 35.835 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VIBNI_A2170 cca43eb898cbbb7d3dd0ed39e570f6af 244 PIRSF PIRSF016642 2 243 4.3E-41 T 15-10-2018 IPR015834 Uncharacterised conserved protein UCP016642 VIBNI_A2170 cca43eb898cbbb7d3dd0ed39e570f6af 244 Gene3D G3DSA:3.40.50.880 10 215 7.1E-10 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2170 cca43eb898cbbb7d3dd0ed39e570f6af 244 SUPERFAMILY SSF52317 9 114 1.25E-11 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A2170 cca43eb898cbbb7d3dd0ed39e570f6af 244 Pfam PF09825 Biotin-protein ligase, N terminal 13 242 9.6E-39 T 15-10-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Gene3D G3DSA:3.30.830.10 470 852 3.0E-109 T 15-10-2018 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 644 3.6E-85 T 15-10-2018 IPR032632 Peptidase M16, middle/third domain VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 SUPERFAMILY SSF63411 233 469 9.78E-76 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Pfam PF05193 Peptidase M16 inactive domain 182 358 1.8E-24 T 15-10-2018 IPR007863 Peptidase M16, C-terminal VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Pfam PF05193 Peptidase M16 inactive domain 647 824 1.0E-12 T 15-10-2018 IPR007863 Peptidase M16, C-terminal VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 SUPERFAMILY SSF63411 470 694 7.52E-60 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 SUPERFAMILY SSF63411 3 226 6.78E-61 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.4E-37 T 15-10-2018 IPR011765 Peptidase M16, N-terminal VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Gene3D G3DSA:3.30.830.10 242 468 3.1E-72 T 15-10-2018 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Gene3D G3DSA:3.30.830.10 1 228 1.9E-87 T 15-10-2018 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 Gene3D G3DSA:3.30.830.10 618 879 3.0E-109 T 15-10-2018 VIBNI_A0768 76b4c0909f822a1b3b25bd4105b262fb 925 SUPERFAMILY SSF63411 703 903 4.19E-46 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A1400 fc9dc08f2dc76a6336fd3b1c41dd32aa 259 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 257 1.2E-64 T 15-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VIBNI_A1400 fc9dc08f2dc76a6336fd3b1c41dd32aa 259 Gene3D G3DSA:2.50.20.10 21 257 2.8E-95 T 15-10-2018 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.7E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 Gene3D G3DSA:1.10.10.10 4 89 2.4E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 SUPERFAMILY SSF46785 3 82 1.31E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 SUPERFAMILY SSF53850 93 296 2.95E-31 T 15-10-2018 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 Pfam PF03466 LysR substrate binding domain 93 292 4.5E-25 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 Gene3D G3DSA:3.40.190.10 162 263 2.4E-47 T 15-10-2018 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0443 09284bfab625ef10883d926f618649f0 322 Gene3D G3DSA:3.40.190.10 102 289 2.4E-47 T 15-10-2018 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 Pfam PF01926 50S ribosome-binding GTPase 30 144 1.1E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 SUPERFAMILY SSF52540 30 225 1.19E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 TIGRFAM TIGR00436 era: GTP-binding protein Era 28 300 5.1E-109 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 189 2.2E-38 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 Gene3D G3DSA:3.40.50.300 21 203 3.7E-52 T 15-10-2018 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 Gene3D G3DSA:3.30.300.20 205 319 4.3E-42 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 Pfam PF07650 KH domain 228 305 1.1E-20 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 SUPERFAMILY SSF54814 201 317 1.01E-40 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VIBNI_A0115 975b2dc5b12814a5c17711ca9ca0270d 321 Hamap MF_00367 GTPase Era [era]. 25 317 35.625 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A1394 3832b322d218b9150559ac594c246202 556 Gene3D G3DSA:2.60.120.260 17 202 8.0E-9 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A1394 3832b322d218b9150559ac594c246202 556 Gene3D G3DSA:3.60.21.10 203 536 3.0E-66 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A1394 3832b322d218b9150559ac594c246202 556 Pfam PF00149 Calcineurin-like phosphoesterase 307 432 1.0E-6 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A1394 3832b322d218b9150559ac594c246202 556 SUPERFAMILY SSF49785 31 135 2.98E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A1394 3832b322d218b9150559ac594c246202 556 SUPERFAMILY SSF56300 270 509 1.25E-26 T 15-10-2018 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 Pfam PF12833 Helix-turn-helix domain 41 116 5.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 SMART SM00342 34 118 1.4E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 Gene3D G3DSA:1.10.10.60 12 67 3.1E-14 T 15-10-2018 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 Gene3D G3DSA:1.10.10.60 68 122 1.9E-14 T 15-10-2018 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 SUPERFAMILY SSF46689 71 120 1.48E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 71 114 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 SUPERFAMILY SSF46689 18 67 9.41E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 SMART SM00871 161 322 2.5E-11 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 SUPERFAMILY SSF55136 187 322 5.76E-22 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 102 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 102 118 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 Pfam PF06445 GyrI-like small molecule binding domain 187 309 6.4E-16 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain VIBNI_B0276 8bef463b845fdcdf18d6de89ecc7af19 332 Gene3D G3DSA:3.20.80.10 164 324 5.2E-27 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A2609 89806c7e94e0b9b99a288592c5d9cd18 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 245 3.6E-70 T 15-10-2018 IPR011435 Protein of unknown function DUF1538 VIBNI_B0520 d005405ac785dd23376c05a9eed0a258 277 Gene3D G3DSA:3.20.20.70 17 269 8.1E-73 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0520 d005405ac785dd23376c05a9eed0a258 277 SUPERFAMILY SSF102110 16 270 4.97E-74 T 15-10-2018 IPR036112 (2R)-phospho-3-sulpholactate synthase, ComA superfamily KEGG: 00680+4.4.1.19 VIBNI_B0520 d005405ac785dd23376c05a9eed0a258 277 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 17 265 5.5E-85 T 15-10-2018 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 Gene3D G3DSA:3.20.20.120 125 352 4.5E-72 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 SUPERFAMILY SSF51604 115 359 2.23E-67 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 127 3.0E-17 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 Pfam PF13378 Enolase C-terminal domain-like 151 354 5.5E-54 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 SMART SM00922 146 243 3.8E-25 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 SUPERFAMILY SSF54826 1 128 1.17E-31 T 15-10-2018 VIBNI_B2045 f7aa5d5d562e94f1ba53a9d72f61a485 362 Gene3D G3DSA:3.30.390.10 1 124 1.7E-29 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 SUPERFAMILY SSF141868 400 644 1.7E-74 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 383 2.0E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 380 8.4E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 Gene3D G3DSA:3.20.20.450 397 647 8.9E-84 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 SUPERFAMILY SSF55073 232 386 1.57E-44 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 SMART SM00052 394 637 4.0E-85 T 15-10-2018 IPR001633 EAL domain VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 Gene3D G3DSA:3.30.70.270 222 396 2.4E-48 T 15-10-2018 VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 Pfam PF00563 EAL domain 400 630 1.6E-65 T 15-10-2018 IPR001633 EAL domain VIBNI_A1573 984c34bad2ad530a59d1d5f7899b6b7c 656 SMART SM00267 216 384 2.3E-53 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2206 8032b8794af31f7610f987b077d9c324 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2206 8032b8794af31f7610f987b077d9c324 223 SUPERFAMILY SSF52540 1 218 4.39E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2206 8032b8794af31f7610f987b077d9c324 223 Pfam PF00005 ABC transporter 21 167 2.6E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2206 8032b8794af31f7610f987b077d9c324 223 Gene3D G3DSA:3.40.50.300 1 223 2.3E-57 T 15-10-2018 VIBNI_A2206 8032b8794af31f7610f987b077d9c324 223 SMART SM00382 30 218 4.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0303 7c5783187a5f9d43adf4969acccc476a 278 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0303 7c5783187a5f9d43adf4969acccc476a 278 Gene3D G3DSA:3.40.50.300 6 245 1.4E-59 T 15-10-2018 VIBNI_B0303 7c5783187a5f9d43adf4969acccc476a 278 SMART SM00382 34 235 3.5E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0303 7c5783187a5f9d43adf4969acccc476a 278 Pfam PF00005 ABC transporter 25 179 6.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0303 7c5783187a5f9d43adf4969acccc476a 278 SUPERFAMILY SSF52540 10 236 1.24E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 SUPERFAMILY SSF88946 11 100 2.04E-12 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 SUPERFAMILY SSF88659 87 163 6.32E-15 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 Pfam PF08281 Sigma-70, region 4 111 161 3.0E-17 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 Gene3D G3DSA:1.10.1740.10 1 77 5.6E-7 T 15-10-2018 VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 Gene3D G3DSA:1.10.10.10 90 167 1.3E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 Pfam PF04542 Sigma-70 region 2 15 80 2.9E-10 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A3884 1ae796856b5f4384822c230b597f2434 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 161 6.1E-24 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 Gene3D G3DSA:3.40.30.60 363 506 1.4E-52 T 15-10-2018 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 15-10-2018 IPR025505 FHIPEP conserved site VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 Gene3D G3DSA:1.10.490.80 598 695 9.5E-15 T 15-10-2018 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 Gene3D G3DSA:1.10.8.540 507 594 8.4E-23 T 15-10-2018 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 7.3E-57 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 PIRSF PIRSF005419 12 697 3.8E-253 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 694 3.3E-266 T 15-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VIBNI_A0738 a6135ab377737d83eb08c017e6607155 697 Pfam PF00771 FHIPEP family 32 687 9.0E-270 T 15-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.9E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 SUPERFAMILY SSF53822 62 329 2.72E-69 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 Gene3D G3DSA:1.10.260.40 1 57 3.3E-22 T 15-10-2018 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 SUPERFAMILY SSF47413 2 59 4.29E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 Gene3D G3DSA:3.40.50.2300 63 306 8.1E-66 T 15-10-2018 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 SMART SM00354 1 71 6.4E-27 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 Gene3D G3DSA:3.40.50.2300 160 289 8.1E-66 T 15-10-2018 VIBNI_A3048 24d2fe942ad55c43604e8161e26ae057 332 Pfam PF13377 Periplasmic binding protein-like domain 169 328 1.5E-30 T 15-10-2018 VIBNI_B1216 7dc6bab2e90dc9a2d9cd6460cb7d6790 116 SUPERFAMILY SSF55248 17 112 2.49E-33 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VIBNI_B1216 7dc6bab2e90dc9a2d9cd6460cb7d6790 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 20 111 3.3E-30 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VIBNI_B1216 7dc6bab2e90dc9a2d9cd6460cb7d6790 116 Gene3D G3DSA:3.30.1360.20 19 116 1.6E-32 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VIBNI_B1216 7dc6bab2e90dc9a2d9cd6460cb7d6790 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 17 112 22.459 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 3.0E-75 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 SUPERFAMILY SSF52507 1 181 8.11E-60 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 6.5E-154 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 Gene3D G3DSA:3.40.50.10300 185 400 7.5E-84 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 Pfam PF02441 Flavoprotein 7 178 5.9E-44 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 Gene3D G3DSA:3.40.50.1950 1 184 2.1E-55 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VIBNI_A3701 f23911180c66ef4bf57ac0a439819a4e 400 SUPERFAMILY SSF102645 184 398 5.36E-80 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VIBNI_A3067 84c2f68a35c958bb472547125ccf882f 257 SUPERFAMILY SSF74853 44 144 2.09E-15 T 15-10-2018 IPR036415 Lamin tail domain superfamily VIBNI_A3067 84c2f68a35c958bb472547125ccf882f 257 SUPERFAMILY SSF74853 148 257 1.12E-12 T 15-10-2018 IPR036415 Lamin tail domain superfamily VIBNI_A3067 84c2f68a35c958bb472547125ccf882f 257 Gene3D G3DSA:2.60.40.1260 161 238 5.1E-8 T 15-10-2018 IPR036415 Lamin tail domain superfamily VIBNI_A3067 84c2f68a35c958bb472547125ccf882f 257 Pfam PF00932 Lamin Tail Domain 148 256 4.8E-14 T 15-10-2018 IPR001322 Lamin tail domain VIBNI_A3067 84c2f68a35c958bb472547125ccf882f 257 Pfam PF00932 Lamin Tail Domain 42 145 1.8E-17 T 15-10-2018 IPR001322 Lamin tail domain VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 Pfam PF03466 LysR substrate binding domain 88 288 3.8E-43 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 SUPERFAMILY SSF46785 1 85 4.3E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 SUPERFAMILY SSF53850 90 289 1.99E-38 T 15-10-2018 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.0E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 Gene3D G3DSA:3.40.190.290 92 290 2.9E-49 T 15-10-2018 VIBNI_A1560 31c97bb8934a281f6aec8bc83ffe3212 291 Gene3D G3DSA:1.10.10.10 1 91 7.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.0E-26 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Gene3D G3DSA:1.20.140.10 232 383 2.2E-54 T 15-10-2018 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 SUPERFAMILY SSF56645 1 240 6.41E-77 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Gene3D G3DSA:1.10.540.10 1 117 1.8E-33 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 3.8E-23 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.8E-50 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 SUPERFAMILY SSF47203 225 379 3.38E-58 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 PIRSF PIRSF016578 4 192 1.7E-8 T 15-10-2018 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 PIRSF PIRSF016578 207 382 9.7E-12 T 15-10-2018 VIBNI_A0948 db4779a175e3ed7b9aeff65fae1be73b 384 Gene3D G3DSA:2.40.110.10 121 231 1.7E-40 T 15-10-2018 VIBNI_B0901 526e50e99af651a8eeb28c356f90105c 434 SUPERFAMILY SSF53613 33 416 2.28E-43 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B0901 526e50e99af651a8eeb28c356f90105c 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 2.5E-9 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A3414 77d1be2d49d73f1ffcfcb397e9444d96 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 55.196 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VIBNI_A3414 77d1be2d49d73f1ffcfcb397e9444d96 544 SUPERFAMILY SSF56112 94 436 6.96E-45 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A3414 77d1be2d49d73f1ffcfcb397e9444d96 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 8.6E-176 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VIBNI_A3414 77d1be2d49d73f1ffcfcb397e9444d96 544 Pfam PF03109 ABC1 family 112 230 3.3E-36 T 15-10-2018 IPR004147 UbiB domain VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Gene3D G3DSA:2.40.50.320 414 485 9.7E-19 T 15-10-2018 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Gene3D G3DSA:2.40.50.320 494 565 4.9E-15 T 15-10-2018 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Gene3D G3DSA:2.40.420.20 325 413 7.3E-22 T 15-10-2018 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Pfam PF11604 Copper binding periplasmic protein CusF 498 563 6.2E-18 T 15-10-2018 IPR021647 Copper binding periplasmic protein CusF VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Pfam PF11604 Copper binding periplasmic protein CusF 418 483 3.5E-21 T 15-10-2018 IPR021647 Copper binding periplasmic protein CusF VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Gene3D G3DSA:2.40.30.170 227 324 1.5E-24 T 15-10-2018 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 SUPERFAMILY SSF111369 131 323 2.62E-16 T 15-10-2018 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 391 1.6E-34 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 5.1E-77 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_B0242 f40d4a1dad4aace17cdd16eaf1a59f57 566 Gene3D G3DSA:2.40.50.100 129 175 1.3E-5 T 15-10-2018 VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 Gene3D G3DSA:1.10.1740.10 8 86 3.2E-17 T 15-10-2018 VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 SUPERFAMILY SSF88946 4 105 1.61E-17 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 Pfam PF04542 Sigma-70 region 2 32 92 7.0E-10 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 Gene3D G3DSA:1.10.10.10 87 172 7.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 171 2.2E-21 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 SUPERFAMILY SSF88659 115 171 2.06E-11 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_B1780 cf40477843858ec3804d3dbe1e584109 173 Pfam PF08281 Sigma-70, region 4 117 167 2.2E-11 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_B1765 d3ba80b78125f8adbffc25454fb11acb 185 SUPERFAMILY SSF52317 1 185 3.89E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1765 d3ba80b78125f8adbffc25454fb11acb 185 Gene3D G3DSA:3.40.50.880 1 185 4.9E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1765 d3ba80b78125f8adbffc25454fb11acb 185 Pfam PF01965 DJ-1/PfpI family 3 183 9.6E-52 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_B1765 d3ba80b78125f8adbffc25454fb11acb 185 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 185 2.5E-57 T 15-10-2018 IPR006286 Deglycase PfpI VIBNI_A0300 f3fe6b6bdf2a4db9f7282e1351563537 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.306 T 15-10-2018 IPR005583 Peroxide stress protein YaaA VIBNI_A0300 f3fe6b6bdf2a4db9f7282e1351563537 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.0E-92 T 15-10-2018 IPR005583 Peroxide stress protein YaaA VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 SMART SM00922 149 245 1.9E-22 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 Gene3D G3DSA:3.30.390.10 3 379 2.9E-118 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 Gene3D G3DSA:3.20.20.120 119 376 2.9E-118 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 SUPERFAMILY SSF54826 1 131 7.07E-32 T 15-10-2018 VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 Pfam PF13378 Enolase C-terminal domain-like 156 376 5.6E-58 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 28 126 4.7E-18 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_B0980 7d3a2384baa24955880cf30da6088363 386 SUPERFAMILY SSF51604 114 385 2.1E-67 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B1085 e12add970b31ac42d9c669cb72f2ca7c 816 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 259 9.3E-79 T 15-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VIBNI_B1085 e12add970b31ac42d9c669cb72f2ca7c 816 Gene3D G3DSA:3.40.50.1820 438 714 3.9E-20 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1085 e12add970b31ac42d9c669cb72f2ca7c 816 SUPERFAMILY SSF53474 444 718 1.85E-14 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1085 e12add970b31ac42d9c669cb72f2ca7c 816 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 801 2.1E-167 T 15-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 SUPERFAMILY SSF51604 105 310 3.54E-46 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 SUPERFAMILY SSF54826 1 100 1.11E-24 T 15-10-2018 VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 Pfam PF13378 Enolase C-terminal domain-like 128 281 3.4E-13 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 5.2E-111 T 15-10-2018 VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 320 21.683 T 15-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 Gene3D G3DSA:3.30.390.10 4 305 2.2E-115 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 Gene3D G3DSA:3.20.20.120 99 300 2.2E-115 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A2411 c9b45795e12211823e6d3287b6dae560 328 SMART SM00922 116 211 3.0E-6 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_B0244 114b1d580173d0297b68af3025748394 171 SUPERFAMILY SSF49503 62 171 2.11E-19 T 15-10-2018 IPR008972 Cupredoxin VIBNI_B0244 114b1d580173d0297b68af3025748394 171 Gene3D G3DSA:2.60.40.420 51 171 6.3E-18 T 15-10-2018 IPR008972 Cupredoxin VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 SUPERFAMILY SSF160246 2 140 6.02E-27 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 142 4.0E-12 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 560 2.0E-233 T 15-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 SUPERFAMILY SSF52540 176 559 9.0E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 Gene3D G3DSA:3.30.450.90 151 288 3.2E-44 T 15-10-2018 VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 Pfam PF00437 Type II/IV secretion system protein 189 455 6.5E-87 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 Gene3D G3DSA:3.40.50.300 290 561 1.2E-103 T 15-10-2018 VIBNI_A0175 2e46b59d05613309305a1cd4fa4c5064 562 Gene3D G3DSA:3.30.300.160 61 140 6.7E-7 T 15-10-2018 VIBNI_A1549 0b549c9bfe6443222e0d52abe2ba2617 266 Pfam PF06314 Acetoacetate decarboxylase (ADC) 23 262 5.5E-52 T 15-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 VIBNI_A1549 0b549c9bfe6443222e0d52abe2ba2617 266 Gene3D G3DSA:2.40.400.10 24 263 1.3E-64 T 15-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 VIBNI_A1549 0b549c9bfe6443222e0d52abe2ba2617 266 SUPERFAMILY SSF160104 14 262 2.49E-57 T 15-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 SUPERFAMILY SSF51604 95 359 3.41E-74 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 Pfam PF13378 Enolase C-terminal domain-like 128 355 4.6E-57 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 SUPERFAMILY SSF54826 1 112 6.91E-31 T 15-10-2018 VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 Gene3D G3DSA:3.30.390.10 11 372 2.1E-148 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 107 3.7E-23 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 Gene3D G3DSA:3.20.20.120 102 344 2.1E-148 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1756 0782d6249afe29201106b8f4832bd71a 385 SMART SM00922 125 230 2.5E-14 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 Pfam PF10150 Ribonuclease E/G family 121 390 6.0E-95 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 1.6E-171 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 SMART SM00316 37 119 2.0E-11 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 Hamap MF_00970 Ribonuclease E [rne]. 1 982 35.666 T 15-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 SUPERFAMILY SSF50249 40 124 2.48E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 Gene3D G3DSA:2.40.50.140 32 125 2.0E-32 T 15-10-2018 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 Pfam PF00575 S1 RNA binding domain 37 118 2.9E-14 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2371 da9daf05440ccf3f491f6008d27285fa 995 Gene3D G3DSA:3.40.1260.20 400 508 8.4E-40 T 15-10-2018 VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 SUPERFAMILY SSF53850 89 293 4.19E-49 T 15-10-2018 VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 SUPERFAMILY SSF46785 1 111 9.83E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 Gene3D G3DSA:3.40.190.10 91 287 2.8E-71 T 15-10-2018 VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 Gene3D G3DSA:1.10.10.10 1 84 2.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 Gene3D G3DSA:3.40.190.10 162 260 2.8E-71 T 15-10-2018 VIBNI_B1670 96248ac2d72862e36935ab68be123291 310 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-47 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 125 1.1E-27 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 SUPERFAMILY SSF50129 1 169 3.1E-43 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 SUPERFAMILY SSF51735 132 292 3.01E-25 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 Pfam PF00107 Zinc-binding dehydrogenase 171 286 1.3E-13 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 Gene3D G3DSA:3.40.50.720 143 275 3.9E-75 T 15-10-2018 VIBNI_A1934 c046ded8e2cb426ff612f052cf616413 332 Gene3D G3DSA:3.90.180.10 19 296 3.9E-75 T 15-10-2018 VIBNI_B0476 663b1150b4eb541248113f229525a1c2 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 428 2.3E-99 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0476 663b1150b4eb541248113f229525a1c2 434 PIRSF PIRSF006066 1 433 1.1E-96 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0476 663b1150b4eb541248113f229525a1c2 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 423 1.9E-97 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B1934 f5bc2a59ef6c8048a1a1628a3a2f4872 405 SUPERFAMILY SSF103473 15 394 4.32E-50 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1934 f5bc2a59ef6c8048a1a1628a3a2f4872 405 Gene3D G3DSA:1.20.1250.20 13 205 1.4E-18 T 15-10-2018 VIBNI_B1934 f5bc2a59ef6c8048a1a1628a3a2f4872 405 Gene3D G3DSA:1.20.1250.20 212 395 4.9E-21 T 15-10-2018 VIBNI_B1934 f5bc2a59ef6c8048a1a1628a3a2f4872 405 Pfam PF07690 Major Facilitator Superfamily 17 298 1.3E-25 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A2752 6b2af0c689d69a011ed7c16082ad8cc2 331 Gene3D G3DSA:3.40.190.170 27 330 1.3E-93 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2752 6b2af0c689d69a011ed7c16082ad8cc2 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 288 3.9E-75 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2752 6b2af0c689d69a011ed7c16082ad8cc2 331 PIRSF PIRSF006470 2 331 9.1E-83 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2752 6b2af0c689d69a011ed7c16082ad8cc2 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 313 7.6E-92 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 Gene3D G3DSA:3.40.50.2300 1 124 7.6E-35 T 15-10-2018 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 SUPERFAMILY SSF46894 165 263 2.21E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 SMART SM00448 3 114 1.8E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 Gene3D G3DSA:1.10.10.10 166 267 6.7E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 SUPERFAMILY SSF52172 4 120 1.1E-34 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 SMART SM00862 186 262 2.8E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2941 7ff7cd2babd3060962679465a9480302 268 Pfam PF00486 Transcriptional regulatory protein, C terminal 186 262 3.8E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 PIRSF PIRSF000178 2 130 1.7E-31 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 5.2E-39 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 Gene3D G3DSA:1.20.1300.10 5 130 3.5E-43 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 SUPERFAMILY SSF81343 8 130 2.62E-33 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2567 b21f8c199f1b0dac95b35c35ee6411c3 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 5.3E-29 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 Gene3D G3DSA:3.20.20.80 258 635 7.2E-133 T 15-10-2018 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 218 238 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 401 419 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 253 270 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 423 436 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 570 586 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 352 369 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 588 605 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 282 303 2.9E-49 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 SUPERFAMILY SSF51445 259 619 2.86E-124 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 138 255 7.8E-19 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 SUPERFAMILY SSF55545 133 258 3.44E-22 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 Gene3D G3DSA:3.30.379.10 131 257 1.6E-21 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VIBNI_A2829 0c0f55d45d2ec293fc1dd14fd3ce095b 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 259 606 8.0E-118 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_B0832 56e50a272ca61da3d8c3f6182dcd769c 125 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 11 101 2.0E-37 T 15-10-2018 IPR020483 Uncharacterised protein family YgbA VIBNI_B0832 56e50a272ca61da3d8c3f6182dcd769c 125 Pfam PF11756 Nitrous oxide-stimulated promoter 11 110 9.9E-44 T 15-10-2018 IPR020483 Uncharacterised protein family YgbA VIBNI_A1111 52ab4bd6633cf2574c726e4998654836 418 Gene3D G3DSA:1.20.1090.10 187 381 8.3E-43 T 15-10-2018 VIBNI_A1111 52ab4bd6633cf2574c726e4998654836 418 Gene3D G3DSA:3.40.50.1970 1 180 2.9E-48 T 15-10-2018 VIBNI_A1111 52ab4bd6633cf2574c726e4998654836 418 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 371 4.7E-92 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_A1111 52ab4bd6633cf2574c726e4998654836 418 SUPERFAMILY SSF56796 1 379 1.7E-89 T 15-10-2018 VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 SUPERFAMILY SSF55729 1 337 1.5E-129 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 3.2E-134 T 15-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 Gene3D G3DSA:3.40.630.30 1 274 8.1E-113 T 15-10-2018 VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 Gene3D G3DSA:2.40.40.20 276 339 1.6E-6 T 15-10-2018 VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.3E-139 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VIBNI_A3555 897a1a55e18df1f50bb6392d1712e2bb 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 5.3E-132 T 15-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 Gene3D G3DSA:3.40.50.12780 9 457 4.7E-118 T 15-10-2018 VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.5E-17 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 SUPERFAMILY SSF56801 16 554 8.9E-149 T 15-10-2018 VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 Gene3D G3DSA:3.30.300.310 458 559 7.0E-30 T 15-10-2018 VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 Pfam PF00501 AMP-binding enzyme 29 461 9.9E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2526 ed65bf1f50dd6e3c3caa0ef9b172572f 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 SUPERFAMILY SSF55073 377 532 3.69E-46 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 368 531 1.7E-48 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 SMART SM00267 361 533 1.0E-63 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 Gene3D G3DSA:3.40.190.10 111 210 4.2E-71 T 15-10-2018 VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 Pfam PF09084 NMT1/THI5 like 41 248 1.6E-51 T 15-10-2018 IPR015168 SsuA/THI5-like VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 SUPERFAMILY SSF53850 28 258 4.3E-32 T 15-10-2018 VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 Gene3D G3DSA:3.30.70.270 365 540 2.3E-54 T 15-10-2018 VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 529 1.5E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0043 5c27c41e9b28bf7032e3a7f1aa945c63 546 Gene3D G3DSA:3.40.190.10 33 299 4.2E-71 T 15-10-2018 VIBNI_A0474 e5ee1344b0440782f9b6ad5c11ca84ff 316 Gene3D G3DSA:3.40.50.2300 38 283 1.5E-73 T 15-10-2018 VIBNI_A0474 e5ee1344b0440782f9b6ad5c11ca84ff 316 Gene3D G3DSA:3.40.50.2300 131 265 1.5E-73 T 15-10-2018 VIBNI_A0474 e5ee1344b0440782f9b6ad5c11ca84ff 316 Pfam PF13407 Periplasmic binding protein domain 30 282 2.2E-50 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A0474 e5ee1344b0440782f9b6ad5c11ca84ff 316 SUPERFAMILY SSF53822 29 308 6.39E-68 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0952 2aca69790e1f801a84b5b35a6c3d5632 428 SUPERFAMILY SSF88659 111 172 5.23E-7 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_B0952 2aca69790e1f801a84b5b35a6c3d5632 428 Pfam PF04542 Sigma-70 region 2 10 78 1.3E-7 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B0952 2aca69790e1f801a84b5b35a6c3d5632 428 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 171 6.2E-14 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_B0952 2aca69790e1f801a84b5b35a6c3d5632 428 Gene3D G3DSA:1.10.1740.10 3 75 2.3E-6 T 15-10-2018 VIBNI_B0952 2aca69790e1f801a84b5b35a6c3d5632 428 SUPERFAMILY SSF88946 7 88 2.2E-10 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 Pfam PF00072 Response regulator receiver domain 5 112 4.5E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 Pfam PF04397 LytTr DNA-binding domain 145 237 2.3E-22 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 SMART SM00850 144 238 2.7E-25 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 SUPERFAMILY SSF52172 1 124 1.71E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 Gene3D G3DSA:2.40.50.1020 143 239 6.0E-10 T 15-10-2018 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 Gene3D G3DSA:3.40.50.2300 1 126 6.4E-29 T 15-10-2018 VIBNI_A0372 543e69bf42fc4bc80b9021f3a0d7a932 240 SMART SM00448 2 112 1.4E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 Pfam PF00005 ABC transporter 24 180 3.4E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 6.1E-19 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.6E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 SUPERFAMILY SSF52540 31 305 9.54E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 Gene3D G3DSA:3.40.50.300 1 321 2.7E-98 T 15-10-2018 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0927 f25589a47a2015f9fc6a746672685dd4 323 SMART SM00382 32 238 4.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0824 47abc2936ed25ad70c99ae5edb6da6dc 625 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 15-10-2018 IPR018093 BCCT transporter, conserved site VIBNI_A0824 47abc2936ed25ad70c99ae5edb6da6dc 625 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 1.2E-158 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VIBNI_A0824 47abc2936ed25ad70c99ae5edb6da6dc 625 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 503 1.4E-146 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VIBNI_A0566 0ed62779747c185f6f00c5ebeebaae26 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.878 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VIBNI_A0566 0ed62779747c185f6f00c5ebeebaae26 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 4.0E-112 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VIBNI_A0566 0ed62779747c185f6f00c5ebeebaae26 446 Pfam PF11973 NQRA C-terminal domain 261 310 1.3E-20 T 15-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VIBNI_A0566 0ed62779747c185f6f00c5ebeebaae26 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 7.3E-199 T 15-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VIBNI_B0924 0cdc03e85289e868e28c1064babf8125 333 Pfam PF09084 NMT1/THI5 like 49 258 4.3E-17 T 15-10-2018 IPR015168 SsuA/THI5-like VIBNI_B0924 0cdc03e85289e868e28c1064babf8125 333 SUPERFAMILY SSF53850 39 310 5.1E-28 T 15-10-2018 VIBNI_B0924 0cdc03e85289e868e28c1064babf8125 333 Gene3D G3DSA:3.40.190.10 31 122 5.7E-9 T 15-10-2018 VIBNI_B0924 0cdc03e85289e868e28c1064babf8125 333 Gene3D G3DSA:3.40.190.10 123 207 1.1E-13 T 15-10-2018 VIBNI_B0924 0cdc03e85289e868e28c1064babf8125 333 Gene3D G3DSA:3.40.190.10 208 330 2.2E-9 T 15-10-2018 VIBNI_B1485 b197b006fef38f109f58f3ae059b7293 167 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 2.1E-16 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1485 b197b006fef38f109f58f3ae059b7293 167 Gene3D G3DSA:3.40.630.30 3 161 4.0E-22 T 15-10-2018 VIBNI_B1485 b197b006fef38f109f58f3ae059b7293 167 SUPERFAMILY SSF55729 6 152 2.93E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 5.2E-70 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 SUPERFAMILY SSF52540 4 286 2.12E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.1E-27 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.1E-27 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.1E-27 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.1E-27 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VIBNI_A3205 61f7ee2742bc1f1385f01ee9b44300f4 289 Gene3D G3DSA:3.40.50.300 1 289 1.2E-111 T 15-10-2018 VIBNI_B1449 20ea719d1b6723c19af1b201ddf978ce 231 PIRSF PIRSF028137 1 231 1.5E-105 T 15-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 SUPERFAMILY SSF53474 2 251 4.56E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 Pfam PF00561 alpha/beta hydrolase fold 26 138 1.3E-15 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 1.1E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.1E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.1E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1866 6ab27941ccf0a1f8cc0f4288e379b54a 251 Gene3D G3DSA:3.40.50.1820 3 251 1.5E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2455 b723519c4f7964349af6bfa5d6a41f59 324 Gene3D G3DSA:1.10.8.350 37 199 1.1E-90 T 15-10-2018 VIBNI_A2455 b723519c4f7964349af6bfa5d6a41f59 324 SUPERFAMILY SSF53955 11 322 5.91E-100 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A2455 b723519c4f7964349af6bfa5d6a41f59 324 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 8.0E-112 T 15-10-2018 IPR011970 Lytic murein transglycosylase VIBNI_A2455 b723519c4f7964349af6bfa5d6a41f59 324 Gene3D G3DSA:1.10.530.10 66 318 1.1E-90 T 15-10-2018 VIBNI_A2455 b723519c4f7964349af6bfa5d6a41f59 324 Pfam PF13406 Transglycosylase SLT domain 23 319 1.0E-108 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 SUPERFAMILY SSF46785 7 81 1.41E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 SUPERFAMILY SSF53850 88 290 3.08E-22 T 15-10-2018 VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 Pfam PF03466 LysR substrate binding domain 89 285 6.7E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 Gene3D G3DSA:3.40.190.290 90 286 2.3E-30 T 15-10-2018 VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 Gene3D G3DSA:1.10.10.10 3 89 9.8E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0211 dba0c3db444a2e1d4432ef5d46d4e3be 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.9E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 15-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 SMART SM00072 3 187 4.6E-77 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.204 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 Pfam PF00625 Guanylate kinase 5 185 3.3E-64 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.1E-76 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 Gene3D G3DSA:3.40.50.300 8 183 2.1E-75 T 15-10-2018 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 Gene3D G3DSA:3.30.63.10 37 96 2.1E-75 T 15-10-2018 VIBNI_A3710 e1c9821f9543d61bee59639847355a11 207 SUPERFAMILY SSF52540 3 189 3.52E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 SUPERFAMILY SSF51905 3 347 4.72E-30 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 Gene3D G3DSA:3.50.50.100 1 406 3.1E-114 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-13 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.7E-13 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.7E-13 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-13 T 15-10-2018 VIBNI_A1068 c53a3b9cc0df61e4b676e0ad09875558 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.3E-63 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A1008 448c61e85b1714a76181d5c9e30e07f1 215 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 36 215 1.9E-68 T 15-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 VIBNI_A1008 448c61e85b1714a76181d5c9e30e07f1 215 Gene3D G3DSA:1.20.120.80 30 215 3.5E-50 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1008 448c61e85b1714a76181d5c9e30e07f1 215 Pfam PF00510 Cytochrome c oxidase subunit III 37 213 3.4E-11 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1008 448c61e85b1714a76181d5c9e30e07f1 215 SUPERFAMILY SSF81452 23 213 6.02E-54 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B0845 2371ebe1545034d71cc7882101b49bd2 331 Gene3D G3DSA:3.40.190.10 121 249 3.5E-44 T 15-10-2018 VIBNI_B0845 2371ebe1545034d71cc7882101b49bd2 331 Gene3D G3DSA:3.40.190.150 26 295 3.5E-44 T 15-10-2018 VIBNI_B0845 2371ebe1545034d71cc7882101b49bd2 331 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 294 4.9E-24 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_A1221 1c159c115f04c159213e28e62cdba21b 445 Gene3D G3DSA:3.40.50.2300 155 296 1.9E-67 T 15-10-2018 VIBNI_A1221 1c159c115f04c159213e28e62cdba21b 445 Pfam PF13458 Periplasmic binding protein 33 404 1.3E-84 T 15-10-2018 IPR028081 Leucine-binding protein domain VIBNI_A1221 1c159c115f04c159213e28e62cdba21b 445 SUPERFAMILY SSF53822 43 409 5.72E-46 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1221 1c159c115f04c159213e28e62cdba21b 445 Gene3D G3DSA:3.40.50.2300 43 366 1.9E-67 T 15-10-2018 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 3.5E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 249 3.4E-14 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 1.9E-133 T 15-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 Gene3D G3DSA:1.10.260.40 1 61 6.9E-25 T 15-10-2018 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 SMART SM00354 1 73 1.1E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 Gene3D G3DSA:3.40.50.2300 62 154 3.3E-18 T 15-10-2018 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 15-10-2018 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 SUPERFAMILY SSF53822 61 306 2.75E-37 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 SUPERFAMILY SSF47413 1 58 1.69E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0826 863a304ba6322f2c3422d04b705636ae 326 Gene3D G3DSA:3.40.50.2300 155 326 1.4E-23 T 15-10-2018 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 SUPERFAMILY SSF54913 225 297 9.67E-22 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Gene3D G3DSA:3.40.190.10 102 191 1.1E-70 T 15-10-2018 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Gene3D G3DSA:3.40.190.10 6 220 1.1E-70 T 15-10-2018 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 SUPERFAMILY SSF53850 5 222 6.71E-67 T 15-10-2018 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Gene3D G3DSA:3.30.70.120 225 298 1.4E-33 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 9.1E-55 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.1E-44 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Pfam PF08029 HisG, C-terminal domain 222 295 1.4E-24 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.558 T 15-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VIBNI_A2292 8ccea95e7e784ef6a55f323f4ebc9d7a 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 297 4.3E-31 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VIBNI_A1587 c03a0f4a6e28fdf7a5ad074609f15025 244 SMART SM00849 29 218 2.4E-16 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A1587 c03a0f4a6e28fdf7a5ad074609f15025 244 SUPERFAMILY SSF56281 12 229 1.62E-31 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A1587 c03a0f4a6e28fdf7a5ad074609f15025 244 Pfam PF00753 Metallo-beta-lactamase superfamily 29 218 3.1E-13 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A1587 c03a0f4a6e28fdf7a5ad074609f15025 244 Gene3D G3DSA:3.60.15.10 3 235 5.1E-39 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 Gene3D G3DSA:3.40.50.720 1 246 1.2E-77 T 15-10-2018 VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 7.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 7.4E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 241 2.1E-60 T 15-10-2018 VIBNI_B0411 9b5d5e25ceb21157ab5a0946f8962e7c 250 SUPERFAMILY SSF51735 2 241 3.56E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2156 ce45ccc726f8a2e4ad4ee47cf9914a07 344 SUPERFAMILY SSF81345 15 336 2.62E-73 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B2156 ce45ccc726f8a2e4ad4ee47cf9914a07 344 Pfam PF01032 FecCD transport family 37 337 3.8E-85 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B2156 ce45ccc726f8a2e4ad4ee47cf9914a07 344 Gene3D G3DSA:1.10.3470.10 12 341 7.7E-86 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 SUPERFAMILY SSF52540 7 252 1.49E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 291 2.1E-15 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 Pfam PF00005 ABC transporter 23 180 1.6E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 Gene3D G3DSA:3.40.50.300 5 308 7.6E-86 T 15-10-2018 VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 SMART SM00382 32 238 9.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1097 71c3c2b1a520d15392072ff46cf9d444 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 291 3.6E-13 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 SUPERFAMILY SSF52540 198 680 1.77E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 2.3E-49 T 15-10-2018 IPR022161 DNA helicase IV, N-terminal domain VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 4.2E-46 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Pfam PF13361 UvrD-like helicase C-terminal domain 547 667 1.5E-17 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Gene3D G3DSA:1.10.10.160 301 416 4.2E-54 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Gene3D G3DSA:3.40.50.300 200 499 4.2E-54 T 15-10-2018 VIBNI_B1250 311ab9b3f57b2c12684490800db28259 688 Gene3D G3DSA:3.40.50.300 507 681 4.5E-27 T 15-10-2018 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 SUPERFAMILY SSF55973 3 109 1.49E-47 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 SUPERFAMILY SSF55973 233 381 8.24E-71 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.526 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Gene3D G3DSA:3.30.300.10 5 233 1.4E-178 T 15-10-2018 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 PIRSF PIRSF000497 1 381 9.4E-174 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Gene3D G3DSA:3.30.300.10 11 270 1.4E-178 T 15-10-2018 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.7E-44 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Gene3D G3DSA:3.30.300.10 102 373 1.4E-178 T 15-10-2018 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 3.5E-196 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 1.2E-69 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.4E-43 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A0081 a221c7d75d54477aea5dc11bde391219 383 SUPERFAMILY SSF55973 111 232 6.28E-51 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 Pfam PF04055 Radical SAM superfamily 117 262 2.0E-10 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 SUPERFAMILY SSF102114 102 324 2.09E-26 T 15-10-2018 VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.2E-156 T 15-10-2018 IPR022462 Lysine-2,3-aminomutase-like VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 5.2E-7 T 15-10-2018 VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 PIRSF PIRSF004911 4 340 8.8E-120 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 8.9E-126 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VIBNI_A3245 1296d3426652b95a64b9fed90cd87f6b 340 Gene3D G3DSA:3.20.20.70 51 334 1.4E-90 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1113 af0005e0ac922537a3fd01effb42b8d3 551 Gene3D G3DSA:3.90.1150.170 54 522 3.7E-111 T 15-10-2018 VIBNI_A1113 af0005e0ac922537a3fd01effb42b8d3 551 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 6.6E-55 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_A1113 af0005e0ac922537a3fd01effb42b8d3 551 Gene3D G3DSA:3.40.640.10 122 387 3.7E-111 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A1113 af0005e0ac922537a3fd01effb42b8d3 551 SUPERFAMILY SSF53383 27 528 1.07E-109 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1113 af0005e0ac922537a3fd01effb42b8d3 551 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 2.6E-292 T 15-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 Pfam PF00005 ABC transporter 16 156 1.3E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 SMART SM00382 23 205 7.2E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 Pfam PF03459 TOBE domain 291 357 1.4E-13 T 15-10-2018 IPR005116 Transport-associated OB, type 1 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 Gene3D G3DSA:2.40.50.100 290 358 1.2E-11 T 15-10-2018 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 Gene3D G3DSA:3.40.50.300 3 227 7.2E-54 T 15-10-2018 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 357 9.2E-137 T 15-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 SUPERFAMILY SSF52540 7 233 6.76E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1160 2c6f76b8820ea994e872cbb1865feacc 365 SUPERFAMILY SSF50331 234 357 1.89E-16 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1357 79552588fbbbce643228f5ee98ff4bd5 295 SUPERFAMILY SSF161098 89 276 4.58E-24 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1357 79552588fbbbce643228f5ee98ff4bd5 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 65 4.9E-12 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_A1357 79552588fbbbce643228f5ee98ff4bd5 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 3.2E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1357 79552588fbbbce643228f5ee98ff4bd5 295 Gene3D G3DSA:1.10.3720.10 84 291 3.7E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0213 a4efc1df3d44b81aa6ab151c34eb05c7 163 PIRSF PIRSF005276 3 163 1.4E-61 T 15-10-2018 IPR007481 Stringent starvation protein B VIBNI_A0213 a4efc1df3d44b81aa6ab151c34eb05c7 163 Gene3D G3DSA:2.30.30.220 3 132 4.5E-53 T 15-10-2018 IPR036760 SspB-like superfamily VIBNI_A0213 a4efc1df3d44b81aa6ab151c34eb05c7 163 SUPERFAMILY SSF101738 4 119 1.2E-49 T 15-10-2018 IPR036760 SspB-like superfamily VIBNI_A0213 a4efc1df3d44b81aa6ab151c34eb05c7 163 Pfam PF04386 Stringent starvation protein B 9 163 1.2E-41 T 15-10-2018 IPR007481 Stringent starvation protein B VIBNI_B0804 783b004485233943e5b0c88716ddd10c 643 SUPERFAMILY SSF56935 18 643 1.02E-125 T 15-10-2018 VIBNI_B0804 783b004485233943e5b0c88716ddd10c 643 Gene3D G3DSA:2.40.170.20 163 643 6.9E-110 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B0804 783b004485233943e5b0c88716ddd10c 643 Pfam PF00593 TonB dependent receptor 240 640 2.0E-59 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B0804 783b004485233943e5b0c88716ddd10c 643 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 4.0E-28 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B0804 783b004485233943e5b0c88716ddd10c 643 Gene3D G3DSA:2.170.130.10 21 150 3.6E-40 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 Pfam PF12802 MarR family 29 85 9.8E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 Gene3D G3DSA:3.40.630.30 142 284 2.1E-26 T 15-10-2018 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 Gene3D G3DSA:1.10.10.10 2 138 1.3E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 6.7E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 6.7E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 6.7E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 SUPERFAMILY SSF46785 6 136 3.79E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 SMART SM00347 22 121 6.5E-18 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 SUPERFAMILY SSF55729 142 282 6.35E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3119 8647b16912c09f7587f9bb9e442628c8 301 Pfam PF00583 Acetyltransferase (GNAT) family 166 278 1.4E-16 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 2 18 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 355 372 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 50 68 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 188 203 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 74 89 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 130 146 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 306 333 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 161 175 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 372 385 3.8E-27 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 SUPERFAMILY SSF51905 4 216 1.85E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 Gene3D G3DSA:3.50.50.60 2 384 8.3E-64 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 Pfam PF00743 Flavin-binding monooxygenase-like 3 411 4.1E-45 T 15-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_A2585 b57d6de6356502b7feb7135e7394f545 483 PIRSF PIRSF000332 1 422 9.8E-52 T 15-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 VIBNI_B1541 73134dc184786b635a0d230c3cbaa1da 202 Gene3D G3DSA:2.60.120.590 15 201 9.1E-67 T 15-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VIBNI_B1541 73134dc184786b635a0d230c3cbaa1da 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 197 3.4E-34 T 15-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VIBNI_B1541 73134dc184786b635a0d230c3cbaa1da 202 SUPERFAMILY SSF51197 11 200 4.58E-65 T 15-10-2018 VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 Gene3D G3DSA:1.20.120.1220 123 278 3.8E-5 T 15-10-2018 VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.5E-29 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.5E-29 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.5E-29 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.5E-29 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.1E-26 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VIBNI_A0173 04b53ded96aba61b884ad141f3742439 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 2.3E-33 T 15-10-2018 IPR010627 Peptidase A24A, N-terminal VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 Pfam PF12833 Helix-turn-helix domain 213 291 8.6E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 SMART SM00342 206 289 4.2E-27 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 Gene3D G3DSA:1.10.10.60 240 295 3.5E-14 T 15-10-2018 VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 SUPERFAMILY SSF51182 13 88 2.87E-7 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 Gene3D G3DSA:1.10.10.60 191 239 3.7E-9 T 15-10-2018 VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 SUPERFAMILY SSF46689 242 293 2.37E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1734 704d3a5df55ae1ce2c95698a3a94a2fa 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1951 a337f52edda25ebc213a42f0b478e7d8 169 Gene3D G3DSA:2.30.110.10 1 168 6.4E-40 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_B1951 a337f52edda25ebc213a42f0b478e7d8 169 SMART SM00903 13 160 2.1E-47 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VIBNI_B1951 a337f52edda25ebc213a42f0b478e7d8 169 SUPERFAMILY SSF50475 9 162 1.18E-43 T 15-10-2018 VIBNI_B1951 a337f52edda25ebc213a42f0b478e7d8 169 Pfam PF01613 Flavin reductase like domain 13 162 7.5E-29 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VIBNI_B1951 a337f52edda25ebc213a42f0b478e7d8 169 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 9 161 1.4E-65 T 15-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 Pfam PF00463 Isocitrate lyase family 98 270 3.5E-22 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 Pfam PF00463 Isocitrate lyase family 318 391 5.0E-9 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 Pfam PF00463 Isocitrate lyase family 428 531 1.4E-13 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 SUPERFAMILY SSF51621 17 516 2.96E-122 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 PIRSF PIRSF001362 1 296 6.8E-31 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 PIRSF PIRSF001362 418 532 9.3E-8 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 PIRSF PIRSF001362 299 410 2.9E-10 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VIBNI_A1521 dd7bc87e7ac70197f1c039c60fec4c1d 532 Gene3D G3DSA:3.20.20.60 414 532 1.5E-21 T 15-10-2018 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 345 1.1E-117 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 784 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 PIRSF PIRSF000854 1 786 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Gene3D G3DSA:3.30.470.20 193 356 1.1E-58 T 15-10-2018 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Gene3D G3DSA:3.20.20.60 477 786 6.0E-103 T 15-10-2018 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Gene3D G3DSA:3.30.1490.20 1 192 2.0E-69 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 SUPERFAMILY SSF51621 460 784 1.26E-96 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Gene3D G3DSA:3.50.30.10 371 476 2.7E-42 T 15-10-2018 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 SUPERFAMILY SSF56059 1 384 2.35E-104 T 15-10-2018 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 SUPERFAMILY SSF52009 347 466 2.35E-35 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 8.2E-61 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VIBNI_B0757 facdf67fc4541b057f37b5fc1c81b54f 786 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 3.9E-27 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 SMART SM00421 147 204 4.7E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.3E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 SUPERFAMILY SSF52172 4 169 1.51E-27 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 Pfam PF00072 Response regulator receiver domain 7 119 1.1E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 SMART SM00448 5 119 2.8E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.5E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 Gene3D G3DSA:3.40.50.2300 3 132 8.0E-28 T 15-10-2018 VIBNI_A3287 4c8521b797593468c6ec071ab34680a1 211 Gene3D G3DSA:1.10.10.10 148 211 4.1E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1768 71a5d9a129f19fed590acca6ac8089dd 441 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 438 3.0E-91 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1768 71a5d9a129f19fed590acca6ac8089dd 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 17 435 1.3E-81 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A1768 71a5d9a129f19fed590acca6ac8089dd 441 PIRSF PIRSF006066 12 441 2.6E-72 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 Pfam PF00175 Oxidoreductase NAD-binding domain 121 232 5.1E-16 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 SUPERFAMILY SSF63380 8 107 3.05E-18 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 Gene3D G3DSA:2.40.30.10 2 105 5.7E-23 T 15-10-2018 VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 Pfam PF00970 Oxidoreductase FAD-binding domain 19 99 5.1E-7 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 SUPERFAMILY SSF52343 115 257 1.7E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0480 db7a2edd9d992afd6125ba6319bdfc67 257 Gene3D G3DSA:3.40.50.80 106 257 3.5E-38 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SUPERFAMILY SSF50249 48 125 6.85E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.223 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.2E-220 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Gene3D G3DSA:1.10.720.10 1 47 1.8E-23 T 15-10-2018 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SMART SM00959 5 47 2.1E-18 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SUPERFAMILY SSF52540 90 371 6.82E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SMART SM00382 170 355 5.2E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 15-10-2018 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 15-10-2018 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.7E-32 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.9E-22 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SUPERFAMILY SSF68912 1 46 2.55E-12 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 SMART SM00357 52 118 1.7E-17 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_A3785 06ca2bc92024f501fdb196c351c16712 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.0E-17 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 SMART SM00788 4 431 0.0 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 Gene3D G3DSA:1.10.300.10 102 201 7.4E-108 T 15-10-2018 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 4.7E-192 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 Gene3D G3DSA:3.90.170.10 267 438 9.8E-67 T 15-10-2018 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 SUPERFAMILY SSF52540 3 436 1.17E-179 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 219.155 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 4.6E-179 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VIBNI_A3213 f30028ee84053021cbbc5ed68875b0dc 438 Gene3D G3DSA:3.40.440.10 6 249 7.4E-108 T 15-10-2018 VIBNI_A2577 ab466456450117fdff30218ac06cc981 160 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.1E-24 T 15-10-2018 IPR027961 Protein of unknown function DUF4442 VIBNI_A2577 ab466456450117fdff30218ac06cc981 160 SUPERFAMILY SSF54637 13 155 5.97E-22 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A2577 ab466456450117fdff30218ac06cc981 160 Gene3D G3DSA:3.10.129.10 18 157 1.5E-25 T 15-10-2018 VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 SMART SM00895 107 229 5.3E-16 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 79 8.5E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 SUPERFAMILY SSF46785 16 87 5.88E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 SMART SM00345 24 83 2.9E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 Gene3D G3DSA:1.20.120.530 103 240 1.6E-22 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 SUPERFAMILY SSF48008 106 231 7.06E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 Pfam PF07729 FCD domain 109 228 3.6E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.1E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.1E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1910 21f97cbe347a5d07c0696dd8674325ef 243 Gene3D G3DSA:1.10.10.10 15 91 1.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1564 345f8c56d37583be1a92d285bd33bb89 141 Gene3D G3DSA:3.30.565.10 18 141 3.7E-14 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1564 345f8c56d37583be1a92d285bd33bb89 141 Pfam PF13581 Histidine kinase-like ATPase domain 23 138 3.2E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1564 345f8c56d37583be1a92d285bd33bb89 141 SUPERFAMILY SSF55874 39 135 3.59E-11 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1624 b1f2142fe59c984ef414b27bd804ee59 160 SUPERFAMILY SSF54637 4 150 6.62E-43 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B1624 b1f2142fe59c984ef414b27bd804ee59 160 Pfam PF03061 Thioesterase superfamily 22 96 3.1E-17 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VIBNI_B1624 b1f2142fe59c984ef414b27bd804ee59 160 Gene3D G3DSA:3.10.129.10 1 156 5.2E-44 T 15-10-2018 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 SUPERFAMILY SSF52374 36 320 2.01E-63 T 15-10-2018 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 SUPERFAMILY SSF48163 352 542 4.71E-11 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 Gene3D G3DSA:3.40.50.620 29 366 2.0E-90 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3389 028d00408d710f40873354af2a222c13 547 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 36 325 3.3E-63 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 Gene3D G3DSA:1.10.10.350 428 546 2.9E-9 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 PRINTS PR00987 Glutamyl-tRNA synthetase signature 245 253 1.6E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 1.6E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 PRINTS PR00987 Glutamyl-tRNA synthetase signature 229 239 1.6E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3389 028d00408d710f40873354af2a222c13 547 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 1.6E-13 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 Gene3D G3DSA:3.40.50.720 1 241 7.8E-45 T 15-10-2018 VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 SUPERFAMILY SSF51735 2 206 5.3E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 8.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 8.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 8.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1966 52d969f8590065e6af95cf4fb4a7488a 242 Pfam PF00106 short chain dehydrogenase 6 191 2.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 SUPERFAMILY SSF81935 17 189 2.75E-62 T 15-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 527 1037 3.7E-234 T 15-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 SUPERFAMILY SSF51730 190 531 1.53E-116 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Pfam PF01619 Proline dehydrogenase 197 490 1.3E-94 T 15-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 840 851 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Gene3D G3DSA:3.40.605.10 547 1036 1.3E-149 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 PIRSF PIRSF000197 3 1039 0.0 T 15-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Gene3D G3DSA:3.20.20.220 149 525 1.5E-132 T 15-10-2018 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Pfam PF00171 Aldehyde dehydrogenase family 583 1036 6.5E-118 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 4.2E-46 T 15-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 SUPERFAMILY SSF53720 581 1037 3.67E-124 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0039 9be18db1b46ae32ccfceb8757dcc543b 1040 Gene3D G3DSA:3.40.309.10 815 1007 1.3E-149 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:2.170.190.11 237 328 1.3E-137 T 15-10-2018 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 SUPERFAMILY SSF52540 10 169 1.91E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:3.90.105.10 214 361 1.3E-137 T 15-10-2018 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 SUPERFAMILY SSF63882 192 362 7.98E-47 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 11 144 7.6E-47 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Pfam PF03454 MoeA C-terminal region (domain IV) 517 589 7.3E-19 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:3.40.980.10 362 513 1.3E-137 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 PIRSF PIRSF036618 1 593 0.0 T 15-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 440 473 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 SUPERFAMILY SSF53218 365 509 4.19E-44 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:2.40.340.10 514 584 1.3E-137 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:3.40.50.300 12 166 5.5E-57 T 15-10-2018 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 364 500 1.8E-31 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 SUPERFAMILY SSF63867 513 591 3.53E-22 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 354 9.4E-41 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Pfam PF00994 Probable molybdopterin binding domain 369 504 8.1E-27 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 SMART SM00852 367 504 1.4E-42 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 11 168 3.9E-43 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VIBNI_A1671 a261d92a32259a2798e5a766ec1865d0 593 Gene3D G3DSA:2.20.25.120 55 87 5.5E-57 T 15-10-2018 VIBNI_B1134 c6808f8f7c757b679fe55d38047d9a9d 318 SUPERFAMILY SSF56349 130 307 7.95E-24 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_B1134 c6808f8f7c757b679fe55d38047d9a9d 318 Pfam PF00589 Phage integrase family 152 297 6.3E-12 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_B1134 c6808f8f7c757b679fe55d38047d9a9d 318 SUPERFAMILY SSF47823 33 124 7.85E-18 T 15-10-2018 VIBNI_B1134 c6808f8f7c757b679fe55d38047d9a9d 318 Gene3D G3DSA:1.10.443.10 129 301 7.2E-28 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_B1134 c6808f8f7c757b679fe55d38047d9a9d 318 Gene3D G3DSA:1.10.150.130 16 128 2.3E-13 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal VIBNI_A3689 c1c5febc322d3f6c816c85d5653094e6 281 Pfam PF00535 Glycosyl transferase family 2 4 109 8.6E-15 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A3689 c1c5febc322d3f6c816c85d5653094e6 281 Gene3D G3DSA:3.90.550.10 1 246 9.2E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3689 c1c5febc322d3f6c816c85d5653094e6 281 SUPERFAMILY SSF53448 1 251 2.94E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1836 db47bec3f96285ba674f3a1c993c2efd 161 SUPERFAMILY SSF52833 35 154 2.21E-23 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1836 db47bec3f96285ba674f3a1c993c2efd 161 Pfam PF08534 Redoxin 35 146 2.5E-10 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VIBNI_B1836 db47bec3f96285ba674f3a1c993c2efd 161 Gene3D G3DSA:3.40.30.10 28 153 6.0E-21 T 15-10-2018 VIBNI_A0410 668da41ff225c3b52167f45ed3e5c05f 729 Gene3D G3DSA:1.10.3720.10 508 725 6.0E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0410 668da41ff225c3b52167f45ed3e5c05f 729 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 447 723 1.1E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0410 668da41ff225c3b52167f45ed3e5c05f 729 SUPERFAMILY SSF50969 83 382 1.1E-6 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VIBNI_A0410 668da41ff225c3b52167f45ed3e5c05f 729 SUPERFAMILY SSF161098 425 661 1.2E-18 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 SUPERFAMILY SSF46785 1 107 2.12E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 SUPERFAMILY SSF53850 86 258 3.62E-18 T 15-10-2018 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 Gene3D G3DSA:3.40.190.10 93 257 3.3E-34 T 15-10-2018 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 Pfam PF03466 LysR substrate binding domain 86 229 4.0E-18 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 Gene3D G3DSA:3.40.190.10 159 251 3.3E-34 T 15-10-2018 VIBNI_B1080 08c233d96dcfba3c3679757653134896 282 Gene3D G3DSA:1.10.10.10 1 90 1.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:1.10.1200.10 502 583 4.8E-10 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:1.10.1200.10 1581 1657 6.5E-21 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.30.559.10 602 968 1.4E-99 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF47336 1583 1655 1.44E-17 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 41 424 1.1E-99 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1096 1499 1.8E-104 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF00550 Phosphopantetheine attachment site 1592 1654 8.1E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF00550 Phosphopantetheine attachment site 512 573 5.9E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF13193 AMP-binding enzyme C-terminal domain 1484 1565 8.6E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 ProSitePatterns PS00012 Phosphopantetheine attachment site. 533 548 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF52777 602 775 1.22E-37 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.40.50.12780 1060 1469 1.5E-102 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.40.50.12780 5 395 1.0E-96 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF56801 1061 1601 4.58E-118 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SMART SM00823 Phosphopantetheine attachment site 1589 1658 0.0026 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SMART SM00823 Phosphopantetheine attachment site 513 578 0.23 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF56801 13 496 1.7E-117 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF52777 781 1034 1.07E-44 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 SUPERFAMILY SSF47336 510 574 2.75E-9 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.30.300.30 1470 1580 1.8E-26 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.30.559.30 779 1024 1.4E-99 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1613 1628 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Gene3D G3DSA:3.30.300.30 396 495 8.0E-24 T 15-10-2018 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1212 1223 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF00501 AMP-binding enzyme 1076 1475 7.1E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF00501 AMP-binding enzyme 24 401 2.5E-77 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1887 4f36d6d572cbf8a35c5b18637427b2e4 1677 Pfam PF00668 Condensation domain 599 1043 7.6E-70 T 15-10-2018 IPR001242 Condensation domain VIBNI_A1902 0d73b43678b5f381e1075865262e4533 216 SUPERFAMILY SSF51366 3 214 3.83E-36 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A1902 0d73b43678b5f381e1075865262e4533 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 203 7.6E-27 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A1902 0d73b43678b5f381e1075865262e4533 216 SMART SM00934 4 206 6.2E-28 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A1902 0d73b43678b5f381e1075865262e4533 216 Gene3D G3DSA:3.20.20.70 1 215 9.5E-73 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 SUPERFAMILY SSF102712 133 190 5.62E-5 T 15-10-2018 VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 Pfam PF04002 RadC-like JAB domain 104 222 2.2E-44 T 15-10-2018 IPR025657 RadC-like JAB domain VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 15-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 Gene3D G3DSA:3.40.140.10 102 224 2.0E-43 T 15-10-2018 VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 SUPERFAMILY SSF47781 17 91 3.5E-12 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.1E-77 T 15-10-2018 IPR001405 Uncharacterised protein family UPF0758 VIBNI_A3699 8bd775676ce87e7d14de45b02dce7b82 224 Gene3D G3DSA:1.10.150.20 33 87 9.9E-6 T 15-10-2018 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 SUPERFAMILY SSF63380 93 197 7.57E-32 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 Gene3D G3DSA:2.40.30.20 102 205 7.7E-35 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 PIRSF PIRSF000498 1 211 2.1E-80 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 1.1E-65 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 SUPERFAMILY SSF63380 1 89 5.27E-25 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 Gene3D G3DSA:2.40.30.20 1 89 1.7E-27 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 Pfam PF00677 Lumazine binding domain 3 87 3.0E-21 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A0654 56006c3dbca8b5b2617a35293674f82b 217 Pfam PF00677 Lumazine binding domain 100 184 1.9E-23 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A2420 b1d864617e5bd06540d59921b432717d 226 Pfam PF01694 Rhomboid family 78 219 4.3E-12 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VIBNI_A2420 b1d864617e5bd06540d59921b432717d 226 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 67 215 4.6E-44 T 15-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VIBNI_A2420 b1d864617e5bd06540d59921b432717d 226 SUPERFAMILY SSF144091 50 219 5.23E-25 T 15-10-2018 VIBNI_A2420 b1d864617e5bd06540d59921b432717d 226 Gene3D G3DSA:1.20.1540.10 42 220 1.3E-18 T 15-10-2018 IPR035952 Rhomboid-like superfamily VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 Gene3D G3DSA:3.10.610.10 39 151 8.3E-34 T 15-10-2018 VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 3.3E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 7.8E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 SUPERFAMILY SSF54523 44 201 3.45E-53 T 15-10-2018 VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 Gene3D G3DSA:2.10.70.20 153 202 4.5E-19 T 15-10-2018 VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 Pfam PF11612 Type II secretion system (T2SS), protein J 59 196 1.4E-39 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 198 3.8E-75 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VIBNI_A3373 15a27c7c350b532fda6de747547f1263 226 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 Gene3D G3DSA:3.40.47.10 205 347 1.1E-36 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 SUPERFAMILY SSF53901 3 203 3.6E-46 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 11 199 3.7E-16 T 15-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 Gene3D G3DSA:3.40.47.10 1 204 1.5E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 208 341 9.0E-18 T 15-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 PIRSF PIRSF000451 1 347 1.6E-100 T 15-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 VIBNI_A2441 6a9fc801f7a513adbd3fe6cd935e5444 347 SUPERFAMILY SSF53901 188 346 8.9E-30 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 SMART SM00418 5 83 6.1E-29 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.5E-22 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 3.5E-22 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.5E-22 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.5E-22 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 Gene3D G3DSA:1.10.10.10 4 88 8.8E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 Pfam PF01022 Bacterial regulatory protein, arsR family 12 56 4.7E-15 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3754 51fab2c58bb20d8384fe6e5b7f2b36ca 110 SUPERFAMILY SSF46785 6 84 1.72E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 Pfam PF03466 LysR substrate binding domain 102 274 8.4E-14 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 SUPERFAMILY SSF46785 4 109 8.16E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 Gene3D G3DSA:1.10.10.10 2 85 4.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 SUPERFAMILY SSF53850 95 293 3.8E-20 T 15-10-2018 VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.2E-112 T 15-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.1E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.14 T 15-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VIBNI_A0089 9b0b08776944e591d06ae35a8e083193 298 Gene3D G3DSA:3.40.190.290 89 295 1.2E-66 T 15-10-2018 VIBNI_B0778 d85a1b5ae6f9d6262c1229ca420bfec9 140 SUPERFAMILY SSF51316 2 136 2.09E-43 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B0778 d85a1b5ae6f9d6262c1229ca420bfec9 140 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 115 2.9E-20 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_B0778 d85a1b5ae6f9d6262c1229ca420bfec9 140 Gene3D G3DSA:2.170.150.70 4 135 9.2E-18 T 15-10-2018 VIBNI_A3703 2f69a3d00004588d4d1f4e92ad644104 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 310 44.271 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VIBNI_A3703 2f69a3d00004588d4d1f4e92ad644104 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 2.0E-76 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VIBNI_A3703 2f69a3d00004588d4d1f4e92ad644104 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 305 2.6E-121 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VIBNI_A3703 2f69a3d00004588d4d1f4e92ad644104 312 PIRSF PIRSF026649 5 306 6.2E-86 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 PIRSF PIRSF004682 1 183 2.9E-59 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 Gene3D G3DSA:3.40.50.1000 2 184 7.1E-57 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 6.5E-36 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 SUPERFAMILY SSF56784 4 182 2.1E-44 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 3.0E-76 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 Pfam PF13242 HAD-hyrolase-like 107 176 2.0E-11 T 15-10-2018 VIBNI_A2731 2525d2abb3d2584e39bc37c3ec5a1dea 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 7.5E-33 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VIBNI_A0925 9edfb7b76d590ba306bd580a2303c4cc 306 Gene3D G3DSA:1.10.3720.10 84 301 2.1E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0925 9edfb7b76d590ba306bd580a2303c4cc 306 SUPERFAMILY SSF161098 88 291 9.05E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0925 9edfb7b76d590ba306bd580a2303c4cc 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.5E-41 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Pfam PF01593 Flavin containing amine oxidoreductase 49 576 5.7E-47 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:3.50.50.60 40 300 5.3E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 SUPERFAMILY SSF51905 40 580 1.64E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:3.30.160.490 164 201 5.3E-57 T 15-10-2018 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:1.10.10.1620 534 584 1.9E-19 T 15-10-2018 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:1.10.405.10 202 283 5.3E-57 T 15-10-2018 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:3.90.660.10 377 533 4.6E-36 T 15-10-2018 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 SUPERFAMILY SSF54373 388 475 1.37E-21 T 15-10-2018 VIBNI_B0090 82dd83a935c677a51cd3ed2d9526507a 588 Gene3D G3DSA:1.10.1200.190 107 294 5.3E-57 T 15-10-2018 VIBNI_B1411 223330ec1ac61f6eecba91ef4cc4e825 212 Gene3D G3DSA:1.10.10.60 91 205 1.1E-17 T 15-10-2018 VIBNI_B1411 223330ec1ac61f6eecba91ef4cc4e825 212 Pfam PF12833 Helix-turn-helix domain 122 198 5.5E-15 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1411 223330ec1ac61f6eecba91ef4cc4e825 212 SMART SM00342 116 198 1.1E-12 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1411 223330ec1ac61f6eecba91ef4cc4e825 212 SUPERFAMILY SSF46689 156 199 8.96E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1137 51c217c55d505db79b284bb4a2da37db 103 Pfam PF01253 Translation initiation factor SUI1 27 95 3.0E-19 T 15-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VIBNI_B1137 51c217c55d505db79b284bb4a2da37db 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 4.2E-37 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VIBNI_B1137 51c217c55d505db79b284bb4a2da37db 103 PIRSF PIRSF037511 1 103 2.4E-32 T 15-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VIBNI_B1137 51c217c55d505db79b284bb4a2da37db 103 Gene3D G3DSA:3.30.780.10 23 103 1.2E-32 T 15-10-2018 VIBNI_B1137 51c217c55d505db79b284bb4a2da37db 103 SUPERFAMILY SSF55159 4 99 1.96E-26 T 15-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VIBNI_A0094 a91ee773bda201cb82f64f95b0b4311e 205 PIRSF PIRSF006806 10 199 1.7E-43 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VIBNI_A0094 a91ee773bda201cb82f64f95b0b4311e 205 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 14 196 5.3E-56 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VIBNI_A0094 a91ee773bda201cb82f64f95b0b4311e 205 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 14 196 9.0E-47 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VIBNI_A0094 a91ee773bda201cb82f64f95b0b4311e 205 Gene3D G3DSA:3.40.50.10420 5 203 2.8E-59 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VIBNI_A0094 a91ee773bda201cb82f64f95b0b4311e 205 SUPERFAMILY SSF100950 13 203 4.33E-57 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A1020 bc6ff128180da008a96bb2530a0dcfd0 628 Gene3D G3DSA:3.60.21.70 297 545 1.8E-10 T 15-10-2018 IPR038607 PhoD-like superfamily VIBNI_A1020 bc6ff128180da008a96bb2530a0dcfd0 628 SUPERFAMILY SSF56300 122 520 6.07E-12 T 15-10-2018 VIBNI_B1434 fbc2aa80eaaf3d29b6a8ca0cf7b6cfe2 174 SUPERFAMILY SSF51182 6 159 2.4E-53 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1434 fbc2aa80eaaf3d29b6a8ca0cf7b6cfe2 174 Pfam PF04115 Ureidoglycolate lyase 6 159 3.8E-50 T 15-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 VIBNI_B1434 fbc2aa80eaaf3d29b6a8ca0cf7b6cfe2 174 PIRSF PIRSF017306 5 163 3.6E-49 T 15-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 VIBNI_B1434 fbc2aa80eaaf3d29b6a8ca0cf7b6cfe2 174 Gene3D G3DSA:2.60.120.480 4 169 2.8E-57 T 15-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 VIBNI_B1434 fbc2aa80eaaf3d29b6a8ca0cf7b6cfe2 174 Hamap MF_00616 Ureidoglycolate lyase [allA]. 4 165 38.389 T 15-10-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 Pfam PF13487 HD domain 266 316 6.8E-15 T 15-10-2018 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 SUPERFAMILY SSF52172 11 186 6.83E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 SUPERFAMILY SSF109604 209 364 3.87E-9 T 15-10-2018 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 SMART SM00448 13 124 4.7E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 Gene3D G3DSA:3.40.50.2300 11 156 3.1E-28 T 15-10-2018 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 Pfam PF00072 Response regulator receiver domain 17 121 3.6E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0893 e46a5fe5b07de3738ee8c925cbfd2479 432 Gene3D G3DSA:1.10.3210.10 182 370 3.3E-29 T 15-10-2018 VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 Pfam PF00929 Exonuclease 13 180 9.0E-38 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 SMART SM00479 11 189 9.7E-52 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 SUPERFAMILY SSF53098 8 188 8.39E-54 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 4.5E-98 T 15-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 229 5.4E-81 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2477 54d5ff83c3bd85ed522a7dc73b70ef88 246 Gene3D G3DSA:3.30.420.10 4 194 1.6E-58 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A0770 c3ee4dc86ac772647e4966efc1898f69 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 38.014 T 15-10-2018 IPR022990 Uncharacterised protein family UPF0115 VIBNI_A0770 c3ee4dc86ac772647e4966efc1898f69 176 SMART SM00463 94 172 2.4E-20 T 15-10-2018 IPR002625 Smr domain VIBNI_A0770 c3ee4dc86ac772647e4966efc1898f69 176 Pfam PF01713 Smr domain 97 171 5.1E-20 T 15-10-2018 IPR002625 Smr domain VIBNI_A0770 c3ee4dc86ac772647e4966efc1898f69 176 SUPERFAMILY SSF160443 95 171 7.72E-13 T 15-10-2018 IPR036063 Smr domain superfamily VIBNI_A0770 c3ee4dc86ac772647e4966efc1898f69 176 Gene3D G3DSA:3.30.1370.110 48 175 6.9E-29 T 15-10-2018 VIBNI_A2384 bc528bb6254df736eed5247015c762d3 160 SUPERFAMILY SSF52728 1 157 7.19E-48 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VIBNI_A2384 bc528bb6254df736eed5247015c762d3 160 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 149 7.5E-58 T 15-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 VIBNI_A2384 bc528bb6254df736eed5247015c762d3 160 Gene3D G3DSA:3.40.35.10 1 158 5.7E-54 T 15-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VIBNI_A2384 bc528bb6254df736eed5247015c762d3 160 Pfam PF03830 PTS system sorbose subfamily IIB component 3 148 6.7E-49 T 15-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VIBNI_B1251 1239ccba1b2d6cc220ea3e536fbd336e 718 SUPERFAMILY SSF81340 61 471 8.5E-5 T 15-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VIBNI_B1251 1239ccba1b2d6cc220ea3e536fbd336e 718 Pfam PF13515 Fusaric acid resistance protein-like 406 525 5.3E-22 T 15-10-2018 VIBNI_B1251 1239ccba1b2d6cc220ea3e536fbd336e 718 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 3.4E-115 T 15-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VIBNI_B1251 1239ccba1b2d6cc220ea3e536fbd336e 718 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 713 0.0 T 15-10-2018 IPR010019 Integral membrane protein, YccS VIBNI_B1251 1239ccba1b2d6cc220ea3e536fbd336e 718 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 712 9.0E-250 T 15-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 SUPERFAMILY SSF46565 290 341 3.79E-12 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 SUPERFAMILY SSF81901 27 170 3.4E-23 T 15-10-2018 VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 Gene3D G3DSA:1.10.287.110 278 345 4.6E-11 T 15-10-2018 IPR036869 Chaperone J-domain superfamily VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 SMART SM00671 108 146 200.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 SMART SM00671 72 107 2.8E-5 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 SMART SM00671 36 71 1.1E-8 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 Pfam PF08238 Sel1 repeat 108 141 29.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 Pfam PF08238 Sel1 repeat 36 71 4.8E-7 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 Pfam PF08238 Sel1 repeat 73 105 3.0E-4 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_A1165 9b6fcdb9c9ed99db864de8a3a95c1673 345 Gene3D G3DSA:1.25.40.10 16 263 7.6E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 Pfam PF00563 EAL domain 379 611 5.0E-71 T 15-10-2018 IPR001633 EAL domain VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 Gene3D G3DSA:3.30.450.40 14 167 2.7E-8 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SMART SM00065 14 161 0.0075 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SMART SM00052 371 616 3.7E-101 T 15-10-2018 IPR001633 EAL domain VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SUPERFAMILY SSF141868 376 623 1.44E-84 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SMART SM00267 192 362 6.5E-5 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 Gene3D G3DSA:3.30.70.270 189 363 3.4E-14 T 15-10-2018 VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SUPERFAMILY SSF55781 18 162 4.71E-15 T 15-10-2018 VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 SUPERFAMILY SSF55073 209 364 1.88E-13 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 1.4E-10 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1184 899655ecc10abff2b550eec313d6b95d 635 Gene3D G3DSA:3.20.20.450 373 625 1.3E-89 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0626 776afc5f6207060f13583b523a211cff 316 Gene3D G3DSA:3.40.50.1980 145 316 2.6E-58 T 15-10-2018 VIBNI_B0626 776afc5f6207060f13583b523a211cff 316 Gene3D G3DSA:3.40.50.1980 29 144 6.8E-26 T 15-10-2018 VIBNI_B0626 776afc5f6207060f13583b523a211cff 316 SUPERFAMILY SSF53807 29 297 3.81E-38 T 15-10-2018 VIBNI_B0626 776afc5f6207060f13583b523a211cff 316 Pfam PF01497 Periplasmic binding protein 99 292 1.6E-18 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A0035 cd271bf9c8113c4f0a6d2d4147d5068f 177 Pfam PF12724 Flavodoxin domain 5 153 3.1E-50 T 15-10-2018 IPR026816 Flavodoxin domain VIBNI_A0035 cd271bf9c8113c4f0a6d2d4147d5068f 177 SUPERFAMILY SSF52218 1 158 3.18E-30 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0035 cd271bf9c8113c4f0a6d2d4147d5068f 177 Gene3D G3DSA:3.40.50.360 1 121 1.1E-11 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A1239 18383135aba150c341b2c34ddc6790c1 148 Pfam PF01575 MaoC like domain 14 111 6.4E-21 T 15-10-2018 IPR002539 MaoC-like dehydratase domain VIBNI_A1239 18383135aba150c341b2c34ddc6790c1 148 SUPERFAMILY SSF54637 5 147 1.24E-36 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A1239 18383135aba150c341b2c34ddc6790c1 148 Gene3D G3DSA:3.10.129.10 3 148 2.0E-40 T 15-10-2018 VIBNI_A1754 971df702f49f1d05e14927290e27400b 299 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 290 2.1E-88 T 15-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 VIBNI_A1754 971df702f49f1d05e14927290e27400b 299 Gene3D G3DSA:3.30.420.300 1 79 3.7E-26 T 15-10-2018 VIBNI_A1754 971df702f49f1d05e14927290e27400b 299 SUPERFAMILY SSF53067 4 173 1.3E-5 T 15-10-2018 VIBNI_A1754 971df702f49f1d05e14927290e27400b 299 Gene3D G3DSA:3.30.420.310 80 294 5.7E-59 T 15-10-2018 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Gene3D G3DSA:1.20.120.140 4 305 6.1E-121 T 15-10-2018 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 SUPERFAMILY SSF52540 42 353 6.9E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.5E-22 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 8.4E-74 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Pfam PF02978 Signal peptide binding domain 329 427 1.1E-33 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 SMART SM00962 100 296 4.5E-113 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 SMART SM00963 1 86 1.4E-36 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Gene3D G3DSA:1.10.260.30 328 454 4.8E-45 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 6.4E-178 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 SMART SM00382 99 247 5.7E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 34.071 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 Gene3D G3DSA:3.40.50.300 90 285 6.1E-121 T 15-10-2018 VIBNI_A0164 0469979dea858bbd968401cb830b0ff9 461 SUPERFAMILY SSF47446 329 430 3.11E-38 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 Gene3D G3DSA:2.60.120.10 8 266 1.7E-107 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 PIRSF PIRSF006625 1 276 2.6E-117 T 15-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 SUPERFAMILY SSF51182 1 260 1.16E-94 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 Pfam PF04962 KduI/IolB family 54 268 7.2E-33 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 49.596 T 15-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0398 c820a7d08e064524a17bacedec719a6e 276 Gene3D G3DSA:2.60.120.520 30 141 1.7E-107 T 15-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 Gene3D G3DSA:3.40.190.10 33 307 1.6E-105 T 15-10-2018 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.3E-66 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 SUPERFAMILY SSF53850 28 332 1.38E-81 T 15-10-2018 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 Gene3D G3DSA:3.40.190.10 133 336 1.6E-105 T 15-10-2018 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 PIRSF PIRSF019574 1 344 7.2E-105 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VIBNI_A1727 e21932bd1e696b1cea5b836ee37e06c9 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 302 3.0E-34 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A3868 d3ecc73757d1371a7e059db8ff45f2fa 129 Pfam PF03899 ATP synthase I chain 15 111 4.0E-17 T 15-10-2018 IPR005598 ATP synthase protein I VIBNI_A2258 cd71a8a1d96fd039f4488240695d4260 351 TIGRFAM TIGR02794 tolA_full: protein TolA 9 349 1.5E-86 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VIBNI_A2258 cd71a8a1d96fd039f4488240695d4260 351 Gene3D G3DSA:3.30.1150.10 250 349 1.5E-24 T 15-10-2018 VIBNI_A2258 cd71a8a1d96fd039f4488240695d4260 351 SUPERFAMILY SSF74653 259 350 7.06E-14 T 15-10-2018 VIBNI_A2258 cd71a8a1d96fd039f4488240695d4260 351 Pfam PF06519 TolA C-terminal 250 348 1.3E-32 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 PIRSF PIRSF000102 1 306 5.6E-62 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 Gene3D G3DSA:3.90.110.10 147 311 5.6E-55 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.683 T 15-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 15-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 SUPERFAMILY SSF51735 1 145 2.87E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.1E-130 T 15-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 Gene3D G3DSA:3.40.50.720 1 146 8.0E-66 T 15-10-2018 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 4.2E-49 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.1E-47 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A2929 0251fc7c0f9d9712cf072da8d7879540 311 SUPERFAMILY SSF56327 146 310 3.09E-44 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VIBNI_B1204 04e6c6b4ea4716be4d57273fb32587ff 390 Gene3D G3DSA:3.40.640.10 58 289 1.4E-135 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1204 04e6c6b4ea4716be4d57273fb32587ff 390 Pfam PF00155 Aminotransferase class I and II 45 377 5.0E-29 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B1204 04e6c6b4ea4716be4d57273fb32587ff 390 SUPERFAMILY SSF53383 26 380 2.99E-70 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1204 04e6c6b4ea4716be4d57273fb32587ff 390 Gene3D G3DSA:3.90.1150.10 19 381 1.4E-135 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B1536 054ad42d7899b2bf31ca76c5d044dd94 426 Pfam PF01547 Bacterial extracellular solute-binding protein 37 335 1.1E-27 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1536 054ad42d7899b2bf31ca76c5d044dd94 426 SUPERFAMILY SSF53850 23 425 3.62E-56 T 15-10-2018 VIBNI_B1536 054ad42d7899b2bf31ca76c5d044dd94 426 Gene3D G3DSA:3.40.190.10 38 384 1.1E-63 T 15-10-2018 VIBNI_B1536 054ad42d7899b2bf31ca76c5d044dd94 426 Gene3D G3DSA:3.40.190.10 144 414 1.1E-63 T 15-10-2018 VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 SMART SM00895 78 208 8.7E-6 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 Gene3D G3DSA:1.10.10.10 1 69 3.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 SMART SM00345 10 68 3.2E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 SUPERFAMILY SSF48008 75 215 4.45E-12 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 SUPERFAMILY SSF46785 2 72 7.96E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 8.3E-16 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 Gene3D G3DSA:1.20.120.530 72 222 5.7E-17 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2886 2ea7f5aa6561543c15e2ad70a403dc8a 223 Pfam PF07729 FCD domain 78 207 2.1E-13 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A0568 d1b26081aba7aad2b27d9f636db34a5b 262 Pfam PF04205 FMN-binding domain 149 244 7.7E-14 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VIBNI_A0568 d1b26081aba7aad2b27d9f636db34a5b 262 PIRSF PIRSF009437 1 262 5.6E-100 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VIBNI_A0568 d1b26081aba7aad2b27d9f636db34a5b 262 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 259 34.968 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VIBNI_A0568 d1b26081aba7aad2b27d9f636db34a5b 262 SMART SM00900 149 247 1.6E-31 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VIBNI_A0568 d1b26081aba7aad2b27d9f636db34a5b 262 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 255 1.0E-92 T 15-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VIBNI_A0155 05cce808ce00741720223795583d44e2 317 SUPERFAMILY SSF50129 5 155 1.98E-34 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0155 05cce808ce00741720223795583d44e2 317 SMART SM00829 13 313 2.4E-13 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A0155 05cce808ce00741720223795583d44e2 317 Gene3D G3DSA:3.90.180.10 11 311 1.9E-89 T 15-10-2018 VIBNI_A0155 05cce808ce00741720223795583d44e2 317 Gene3D G3DSA:3.40.50.720 134 264 1.9E-89 T 15-10-2018 VIBNI_A0155 05cce808ce00741720223795583d44e2 317 SUPERFAMILY SSF51735 123 244 4.75E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0155 05cce808ce00741720223795583d44e2 317 Pfam PF13602 Zinc-binding dehydrogenase 192 313 1.2E-18 T 15-10-2018 VIBNI_A0155 05cce808ce00741720223795583d44e2 317 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 93 8.4E-8 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A3406 ca70a44c10a99677d5bacb9849416d77 142 SUPERFAMILY SSF55729 3 122 2.74E-15 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3406 ca70a44c10a99677d5bacb9849416d77 142 Pfam PF00583 Acetyltransferase (GNAT) family 26 113 6.2E-6 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3406 ca70a44c10a99677d5bacb9849416d77 142 Gene3D G3DSA:3.40.630.30 1 141 6.0E-14 T 15-10-2018 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Gene3D G3DSA:2.170.150.20 227 375 7.0E-57 T 15-10-2018 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 SUPERFAMILY SSF55068 28 203 1.57E-66 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 SUPERFAMILY SSF51316 236 376 2.41E-59 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Pfam PF01625 Peptide methionine sulfoxide reductase 41 191 1.0E-54 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 190 1.2E-48 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 234 360 35.153 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 235 368 1.2E-60 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Pfam PF01641 SelR domain 241 359 2.8E-46 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Gene3D G3DSA:3.30.1060.10 24 208 6.7E-60 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0850 1e29c7b66033763c9d0415abfd6be920 377 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 38 197 34.227 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 Gene3D G3DSA:3.20.20.80 8 462 2.5E-178 T 15-10-2018 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 Pfam PF00128 Alpha amylase, catalytic domain 31 385 3.5E-95 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 Gene3D G3DSA:3.90.400.10 108 178 2.5E-178 T 15-10-2018 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 SMART SM00642 16 410 1.7E-121 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 SUPERFAMILY SSF51011 470 543 5.43E-7 T 15-10-2018 VIBNI_A1184 5798bc1a9597f6db6ab809602e7bcdfe 555 SUPERFAMILY SSF51445 7 467 6.38E-135 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A3469 0ae19e3a654a2d1a747a455cd624acc8 286 Pfam PF13469 Sulfotransferase family 49 237 1.6E-10 T 15-10-2018 VIBNI_A3469 0ae19e3a654a2d1a747a455cd624acc8 286 SUPERFAMILY SSF52540 35 260 1.44E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3469 0ae19e3a654a2d1a747a455cd624acc8 286 Gene3D G3DSA:3.40.50.300 30 284 3.5E-19 T 15-10-2018 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 Pfam PF04542 Sigma-70 region 2 15 76 3.3E-9 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 SUPERFAMILY SSF88659 100 165 1.2E-10 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 Pfam PF08281 Sigma-70, region 4 114 160 1.7E-7 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 162 1.5E-22 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 SUPERFAMILY SSF88946 11 91 7.46E-10 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 Gene3D G3DSA:1.10.1740.10 5 78 4.9E-9 T 15-10-2018 VIBNI_B2146 4e767f3aa50bafdb1b18f52a05cbfafd 174 Gene3D G3DSA:1.10.10.10 105 166 1.2E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 Pfam PF07885 Ion channel 239 324 5.6E-14 T 15-10-2018 IPR013099 Potassium channel domain VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 Gene3D G3DSA:2.160.20.100 43 184 2.4E-16 T 15-10-2018 VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 SUPERFAMILY SSF81324 230 324 1.7E-17 T 15-10-2018 VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 1.1E-7 T 15-10-2018 IPR001646 Pentapeptide repeat VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 Gene3D G3DSA:1.10.287.70 228 325 1.1E-15 T 15-10-2018 VIBNI_A2762 3850a2620fd48bf2589f361f7ae196ac 325 SUPERFAMILY SSF141571 59 139 1.01E-15 T 15-10-2018 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 7 494 8.8E-229 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 3.4E-63 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 SUPERFAMILY SSF53067 7 255 7.45E-96 T 15-10-2018 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 SUPERFAMILY SSF53067 255 494 8.81E-86 T 15-10-2018 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 Hamap MF_00186 Glycerol kinase [glpK]. 5 496 57.155 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 Gene3D G3DSA:3.30.420.40 4 253 3.7E-110 T 15-10-2018 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 Gene3D G3DSA:3.30.420.40 254 495 7.4E-91 T 15-10-2018 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 PIRSF PIRSF000538 5 496 4.5E-175 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1708 ab2602e2a329539e950649952ff0369c 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 1.3E-85 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A3347 aea0210f0d73d744dce28c6e07038f29 147 Gene3D G3DSA:3.30.70.330 44 146 1.1E-26 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VIBNI_A3347 aea0210f0d73d744dce28c6e07038f29 147 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 9.5E-18 T 15-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VIBNI_A3347 aea0210f0d73d744dce28c6e07038f29 147 SUPERFAMILY SSF54928 44 140 8.46E-27 T 15-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VIBNI_A3347 aea0210f0d73d744dce28c6e07038f29 147 SMART SM00360 62 134 2.8E-22 T 15-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 Pfam PF01553 Acyltransferase 286 424 2.7E-23 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 SMART SM00563 300 427 5.3E-27 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 PIRSF PIRSF000437 19 807 0.0 T 15-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 PIRSF PIRSF500064 3 807 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.399 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VIBNI_A3359 3efd1a39ad96d6eb27f1d2bf6154895c 807 SUPERFAMILY SSF69593 239 489 6.67E-27 T 15-10-2018 VIBNI_A2264 6748e90edc3a9e15c6462699c107df2e 528 PIRSF PIRSF006446 354 525 1.8E-33 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_A2264 6748e90edc3a9e15c6462699c107df2e 528 PIRSF PIRSF006446 1 331 2.1E-116 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_A2264 6748e90edc3a9e15c6462699c107df2e 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.6E-178 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 209 242 5.9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 290 323 120.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 172 205 25.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 250 283 0.0013 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 370 403 100.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00028 330 363 250.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SMART SM00267 466 638 4.5E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 Gene3D G3DSA:1.25.40.10 98 244 1.4E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SUPERFAMILY SSF48452 212 413 3.31E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 633 8.0E-34 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SUPERFAMILY SSF48452 109 239 1.42E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 Pfam PF13424 Tetratricopeptide repeat 212 282 3.8E-13 T 15-10-2018 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 Gene3D G3DSA:1.25.40.10 250 443 3.1E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 SUPERFAMILY SSF55073 482 636 1.88E-36 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 635 5.5E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1824 e6fd0629f3e7f6d9850311ed5c9b9dd1 656 Gene3D G3DSA:3.30.70.270 471 640 5.1E-41 T 15-10-2018 VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 564 3.9E-33 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 Gene3D G3DSA:3.30.450.20 128 247 1.9E-8 T 15-10-2018 VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 Pfam PF17201 Cache 3/Cache 2 fusion domain 150 243 6.4E-7 T 15-10-2018 IPR033462 Cache 3/Cache 2 fusion domain VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 SMART SM00267 401 568 3.3E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 414 568 5.9E-34 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 Gene3D G3DSA:3.30.70.270 409 569 7.3E-41 T 15-10-2018 VIBNI_B1578 3250a5cb593f6565145e53fa429911a3 570 SUPERFAMILY SSF55073 418 567 2.82E-36 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1839 9e9bcce52a3311f44fe61c93b497fcb2 311 Pfam PF00892 EamA-like transporter family 140 279 6.5E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1839 9e9bcce52a3311f44fe61c93b497fcb2 311 Pfam PF00892 EamA-like transporter family 3 128 7.7E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1839 9e9bcce52a3311f44fe61c93b497fcb2 311 SUPERFAMILY SSF103481 42 123 4.58E-8 T 15-10-2018 VIBNI_B0392 22fc1d33572a427d1aaae8fdcea01a3f 161 Gene3D G3DSA:3.40.630.30 2 158 3.7E-28 T 15-10-2018 VIBNI_B0392 22fc1d33572a427d1aaae8fdcea01a3f 161 Pfam PF13673 Acetyltransferase (GNAT) domain 30 139 3.0E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0392 22fc1d33572a427d1aaae8fdcea01a3f 161 SUPERFAMILY SSF55729 1 156 2.49E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0213 df3e8f2077f44883193f8b591472ab8f 309 Gene3D G3DSA:1.10.3720.10 79 308 2.9E-33 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0213 df3e8f2077f44883193f8b591472ab8f 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 32 306 6.7E-91 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VIBNI_B0213 df3e8f2077f44883193f8b591472ab8f 309 SUPERFAMILY SSF161098 38 304 4.02E-36 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0213 df3e8f2077f44883193f8b591472ab8f 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 305 1.4E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2067 aa21fff4b99bcb352734b17b65dd3690 325 SUPERFAMILY SSF53822 35 315 1.52E-64 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2067 aa21fff4b99bcb352734b17b65dd3690 325 Pfam PF13407 Periplasmic binding protein domain 37 295 2.0E-55 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A2067 aa21fff4b99bcb352734b17b65dd3690 325 Gene3D G3DSA:3.40.50.2300 40 304 4.1E-75 T 15-10-2018 VIBNI_A2067 aa21fff4b99bcb352734b17b65dd3690 325 Gene3D G3DSA:3.40.50.2300 142 312 4.1E-75 T 15-10-2018 VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 1.7E-194 T 15-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 Gene3D G3DSA:2.30.40.10 9 426 1.1E-194 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 SUPERFAMILY SSF51556 73 375 1.72E-100 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 SUPERFAMILY SSF51338 29 89 8.41E-9 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 Pfam PF01979 Amidohydrolase family 70 429 3.3E-68 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_B1484 4d695e57d03bdf22f7b3ebb555dd658a 435 Gene3D G3DSA:3.20.20.140 73 390 1.1E-194 T 15-10-2018 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Pfam PF14814 Bifunctional transglycosylase second domain 91 174 1.4E-24 T 15-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 PIRSF PIRSF002799 9 787 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 191 724 2.6E-153 T 15-10-2018 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Gene3D G3DSA:3.40.710.10 81 738 2.9E-256 T 15-10-2018 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Pfam PF00912 Transglycosylase 187 358 2.2E-60 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Gene3D G3DSA:3.30.2060.10 89 178 2.9E-256 T 15-10-2018 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Pfam PF00905 Penicillin binding protein transpeptidase domain 451 688 3.0E-23 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 SUPERFAMILY SSF56601 340 768 2.36E-106 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 Gene3D G3DSA:1.10.3810.10 179 382 2.9E-256 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 SUPERFAMILY SSF53955 175 379 2.0E-68 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A2844 e8094c47d02617b159b1069f510cf4de 787 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 46 768 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3399 69f6c0a80538fd159a3c6a531d14d710 164 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 1.0E-42 T 15-10-2018 IPR019617 Domain of unknown function DUF2489 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 SUPERFAMILY SSF53335 5 268 8.31E-75 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.5E-67 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 PIRSF PIRSF000398 1 275 1.2E-70 T 15-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 Gene3D G3DSA:3.40.50.150 7 239 3.3E-83 T 15-10-2018 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 Gene3D G3DSA:1.10.1020.10 57 156 3.3E-83 T 15-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.0E-92 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A3577 d510f4b9e4dcf3b36493463236d818d7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Gene3D G3DSA:2.40.50.140 983 1072 3.6E-9 T 15-10-2018 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 2.1E-10 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 SMART SM00481 7 74 3.6E-26 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Pfam PF02811 PHP domain 8 172 2.4E-42 T 15-10-2018 IPR004013 PHP domain GO:0003824 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 1.3E-174 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 SUPERFAMILY SSF89550 5 263 8.04E-14 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 1.3E-25 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Gene3D G3DSA:3.20.20.140 1 270 8.8E-94 T 15-10-2018 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 Gene3D G3DSA:1.10.10.1600 433 510 9.1E-33 T 15-10-2018 VIBNI_A2489 0247a2863ee5f64ff5369103537c8eec 1159 SUPERFAMILY SSF50249 977 1064 5.45E-5 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2733 858cca7e9648ca898a3f3f598204accb 225 SUPERFAMILY SSF161098 15 210 1.18E-46 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2733 858cca7e9648ca898a3f3f598204accb 225 Gene3D G3DSA:1.10.3720.10 13 225 4.4E-50 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2733 858cca7e9648ca898a3f3f598204accb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.6E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1880 5cbb39a46b8fd8d2a2e37e10f22146fd 178 SUPERFAMILY SSF52833 7 154 3.32E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1880 5cbb39a46b8fd8d2a2e37e10f22146fd 178 Pfam PF00578 AhpC/TSA family 17 133 1.2E-11 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_B1880 5cbb39a46b8fd8d2a2e37e10f22146fd 178 Gene3D G3DSA:3.40.30.10 5 156 9.1E-36 T 15-10-2018 VIBNI_A2243 724729f13f620210c8d91c3de2b8744b 325 Pfam PF13182 Protein of unknown function (DUF4007) 10 322 1.4E-67 T 15-10-2018 IPR025248 Domain of unknown function DUF4007 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Gene3D G3DSA:1.10.8.410 328 376 3.2E-20 T 15-10-2018 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 SUPERFAMILY SSF64518 1 376 6.41E-100 T 15-10-2018 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Pfam PF07196 Flagellin hook IN motif 196 249 2.3E-9 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Gene3D G3DSA:1.20.1330.10 44 327 1.3E-77 T 15-10-2018 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-43 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 2.6E-25 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 Gene3D G3DSA:3.30.70.2120 174 275 1.3E-77 T 15-10-2018 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 PRINTS PR00207 Flagellin signature 37 54 1.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 PRINTS PR00207 Flagellin signature 76 95 1.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0710 d8e7f828ed43d8733e3e003bd7423f9f 377 PRINTS PR00207 Flagellin signature 111 134 1.1E-26 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Pfam PF00082 Subtilase family 459 540 9.1E-15 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 SMART SM00495 580 622 3.2E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Gene3D G3DSA:3.30.70.80 37 123 5.0E-5 T 15-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Gene3D G3DSA:3.50.30.30 336 482 1.3E-150 T 15-10-2018 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 490 500 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 SUPERFAMILY SSF52743 124 550 2.84E-94 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 SUPERFAMILY SSF51055 567 624 3.73E-13 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Gene3D G3DSA:2.10.10.20 566 624 3.2E-19 T 15-10-2018 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 143 162 2.0E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 2.0E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 489 505 2.0E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Gene3D G3DSA:3.40.50.200 145 547 1.3E-150 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Pfam PF00082 Subtilase family 147 334 5.7E-26 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_B1712 1ec7e0d930979b2ed14f5c3f3fb2b201 625 Pfam PF14600 Cellulose-binding domain 570 622 5.3E-22 T 15-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 SMART SM00471 170 321 2.5E-10 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 Pfam PF01966 HD domain 175 311 3.4E-18 T 15-10-2018 IPR006674 HD domain VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 SMART SM00448 9 121 1.7E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 SUPERFAMILY SSF52172 7 152 3.27E-41 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 Pfam PF00072 Response regulator receiver domain 11 121 3.2E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 Gene3D G3DSA:1.10.3210.10 148 365 2.4E-81 T 15-10-2018 VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 Gene3D G3DSA:3.40.50.2300 4 142 4.1E-40 T 15-10-2018 VIBNI_A1567 16b6b44afcde12409acd96401be5a1dd 373 SUPERFAMILY SSF109604 151 350 1.54E-33 T 15-10-2018 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 38 83 3.1E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 Pfam PF07702 UTRA domain 104 243 1.9E-38 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 SMART SM00345 26 83 8.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 SUPERFAMILY SSF46785 20 87 2.87E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 8.9E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 8.9E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 Gene3D G3DSA:3.40.1410.10 87 252 8.4E-53 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 SUPERFAMILY SSF64288 71 250 3.61E-48 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 SMART SM00866 103 243 5.4E-38 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B1403 14997748bc08a660390f1f79cd907988 252 Gene3D G3DSA:1.10.10.10 18 84 3.5E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1038 30190c6683ae65726cdf36d4172541a1 332 Gene3D G3DSA:3.40.50.2300 29 283 2.2E-98 T 15-10-2018 VIBNI_A1038 30190c6683ae65726cdf36d4172541a1 332 Gene3D G3DSA:3.40.50.2300 127 319 2.2E-98 T 15-10-2018 VIBNI_A1038 30190c6683ae65726cdf36d4172541a1 332 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 29 303 8.1E-61 T 15-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 VIBNI_A1038 30190c6683ae65726cdf36d4172541a1 332 SUPERFAMILY SSF53822 37 264 6.67E-15 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2584 fcf83b179501e68da6941e1b337945be 527 Pfam PF00999 Sodium/hydrogen exchanger family 4 349 2.4E-35 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VIBNI_A2584 fcf83b179501e68da6941e1b337945be 527 SUPERFAMILY SSF51735 387 518 4.6E-12 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2584 fcf83b179501e68da6941e1b337945be 527 Pfam PF02254 TrkA-N domain 388 504 1.2E-15 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VIBNI_A2584 fcf83b179501e68da6941e1b337945be 527 Gene3D G3DSA:3.40.50.720 379 526 3.4E-30 T 15-10-2018 VIBNI_A2584 fcf83b179501e68da6941e1b337945be 527 Gene3D G3DSA:1.20.1530.20 2 364 6.5E-44 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A0244 84099d67cd3bb480a649594933737147 363 Gene3D G3DSA:3.40.1190.20 56 363 2.0E-80 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0244 84099d67cd3bb480a649594933737147 363 SUPERFAMILY SSF46785 1 54 5.14E-8 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0244 84099d67cd3bb480a649594933737147 363 SUPERFAMILY SSF53613 61 359 3.43E-60 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0244 84099d67cd3bb480a649594933737147 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_A0244 84099d67cd3bb480a649594933737147 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 1.4E-9 T 15-10-2018 VIBNI_A0244 84099d67cd3bb480a649594933737147 363 Pfam PF00294 pfkB family carbohydrate kinase 59 347 5.1E-52 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A0244 84099d67cd3bb480a649594933737147 363 Gene3D G3DSA:1.10.10.10 2 55 4.2E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0979 8243ba5d54eeac7064f5c2e0a359bfa7 218 SUPERFAMILY SSF51569 11 212 1.57E-51 T 15-10-2018 VIBNI_B0979 8243ba5d54eeac7064f5c2e0a359bfa7 218 Gene3D G3DSA:3.20.20.70 9 214 1.6E-57 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0979 8243ba5d54eeac7064f5c2e0a359bfa7 218 Pfam PF01081 KDPG and KHG aldolase 15 191 6.3E-29 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_A3162 e03c4e03dd791408d2ac0597eea37a61 117 Gene3D G3DSA:3.30.420.100 1 117 4.1E-44 T 15-10-2018 VIBNI_A3162 e03c4e03dd791408d2ac0597eea37a61 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.832 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3162 e03c4e03dd791408d2ac0597eea37a61 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.7E-43 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3162 e03c4e03dd791408d2ac0597eea37a61 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 9.3E-43 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3162 e03c4e03dd791408d2ac0597eea37a61 117 SUPERFAMILY SSF53137 3 115 5.01E-51 T 15-10-2018 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.4 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 PIRSF PIRSF002070 2 173 6.0E-39 T 15-10-2018 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 Pfam PF00436 Single-strand binding protein family 6 106 2.8E-43 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 Gene3D G3DSA:2.40.50.140 2 148 1.6E-51 T 15-10-2018 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 180 3.3E-63 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VIBNI_A3028 35bb07ccf09eaa162ee3c5880c9aa5f9 180 SUPERFAMILY SSF50249 4 180 1.61E-63 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2278 8d7780f66b5a41c29da3f558be24ab5e 320 Pfam PF14397 Sugar-transfer associated ATP-grasp 21 294 1.1E-115 T 15-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VIBNI_A2278 8d7780f66b5a41c29da3f558be24ab5e 320 SUPERFAMILY SSF56059 46 279 2.53E-19 T 15-10-2018 VIBNI_A2278 8d7780f66b5a41c29da3f558be24ab5e 320 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 319 4.1E-171 T 15-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VIBNI_A1994 ae33f09316aa2fc972647a306bf186ad 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 4.8E-13 T 15-10-2018 VIBNI_A1994 ae33f09316aa2fc972647a306bf186ad 166 SUPERFAMILY SSF55729 5 166 2.23E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1994 ae33f09316aa2fc972647a306bf186ad 166 Gene3D G3DSA:3.40.630.30 3 166 2.4E-30 T 15-10-2018 VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 Gene3D G3DSA:1.10.3210.10 4 329 3.1E-58 T 15-10-2018 VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 SUPERFAMILY SSF109604 157 329 5.39E-29 T 15-10-2018 VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 Pfam PF01966 HD domain 169 289 4.4E-17 T 15-10-2018 IPR006674 HD domain VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 2.7E-31 T 15-10-2018 IPR021812 Protein of unknown function DUF3391 VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 SMART SM00471 163 299 1.2E-9 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A3045 d696699b7942ec57095f5a50006945bd 416 TIGRFAM TIGR00277 HDIG: HDIG domain 165 258 3.3E-9 T 15-10-2018 IPR006675 HDIG domain VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SUPERFAMILY SSF55874 200 349 6.02E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 4.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 4.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 4.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SUPERFAMILY SSF55785 9 105 7.5E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Gene3D G3DSA:3.30.450.20 5 114 1.0E-22 T 15-10-2018 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SMART SM00387 235 351 5.2E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SMART SM00388 131 196 2.6E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Gene3D G3DSA:1.10.287.130 116 193 3.1E-14 T 15-10-2018 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 349 2.5E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Gene3D G3DSA:3.30.565.10 194 351 1.2E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 192 1.2E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SUPERFAMILY SSF47384 127 192 1.71E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 Pfam PF00989 PAS fold 10 107 1.1E-15 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_A3480 d5ccb47a8a13251c42f0f9148bbe58c3 351 SMART SM00091 6 74 2.2E-4 T 15-10-2018 IPR000014 PAS domain VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 4 112 1.46E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 346 440 4.1E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 88 174 2.09E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 103 171 5.6E-8 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 18 86 9.7E-7 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 362 434 2.1E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Pfam PF00575 S1 RNA binding domain 449 520 5.5E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 269 357 2.2E-31 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 358 444 1.4E-23 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 255 360 6.04E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 7.9E-97 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 PIRSF PIRSF002111 1 534 4.0E-217 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 445 528 2.7E-19 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 99 178 1.0E-5 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 6 98 1.2E-16 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SUPERFAMILY SSF50249 429 536 1.86E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.1E-230 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 15-10-2018 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 19 87 0.0023 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 275 347 8.1E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 190 260 1.2E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 103 171 1.4E-7 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 449 520 7.3E-20 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2334 df3a32d4b518b7ea746eeefcf81b60b8 556 SMART SM00316 362 434 4.6E-21 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A1013 02bfa3fd81fff5e9a2aafec6eb797fe0 259 SUPERFAMILY SSF53474 5 245 2.2E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1013 02bfa3fd81fff5e9a2aafec6eb797fe0 259 Pfam PF00975 Thioesterase domain 23 243 5.0E-34 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_A1013 02bfa3fd81fff5e9a2aafec6eb797fe0 259 Gene3D G3DSA:3.40.50.1820 4 247 2.0E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 PIRSF PIRSF006092 1 158 6.9E-47 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Gene3D G3DSA:1.10.287.180 1 76 4.6E-32 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 53.672 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Gene3D G3DSA:3.10.50.30 77 159 7.0E-32 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 SUPERFAMILY SSF54534 80 156 3.14E-19 T 15-10-2018 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.3E-26 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 SUPERFAMILY SSF46557 3 77 9.02E-28 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 7.8E-22 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 156 1.1E-78 T 15-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VIBNI_A3726 fdc7f6cb05c60295bac9f51643f7cd0b 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.317 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Pfam PF00773 RNB domain 267 594 1.1E-106 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Gene3D G3DSA:2.40.50.140 77 155 1.9E-11 T 15-10-2018 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Pfam PF08461 Ribonuclease R winged-helix domain 27 87 3.5E-11 T 15-10-2018 IPR013668 Ribonuclease R winged-helix domain VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Pfam PF00575 S1 RNA binding domain 650 731 2.1E-13 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 1.2E-255 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SUPERFAMILY SSF50249 227 650 4.28E-142 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 4.6E-273 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Gene3D G3DSA:2.40.50.140 653 764 6.6E-27 T 15-10-2018 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SUPERFAMILY SSF50249 145 241 5.54E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SUPERFAMILY SSF50249 651 738 2.36E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SUPERFAMILY SSF50249 71 154 4.12E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SMART SM00316 650 733 8.3E-15 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SMART SM00357 90 152 1.4E-11 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Pfam PF08206 Ribonuclease B OB domain 91 151 1.6E-19 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 SMART SM00955 267 595 1.4E-183 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VIBNI_A3208 b6b33590ba3d1f2b441c5a1e653e363b 819 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.455 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 5.2E-46 T 15-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 SMART SM00100 17 134 2.4E-9 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 SUPERFAMILY SSF54631 151 277 2.14E-29 T 15-10-2018 VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 SMART SM00116 159 215 1.6E-4 T 15-10-2018 IPR000644 CBS domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 SMART SM00116 232 279 1.6E-8 T 15-10-2018 IPR000644 CBS domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 1.0E-45 T 15-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 4.8E-15 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Pfam PF00571 CBS domain 152 213 3.2E-10 T 15-10-2018 IPR000644 CBS domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Pfam PF00571 CBS domain 225 277 4.8E-11 T 15-10-2018 IPR000644 CBS domain VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 SUPERFAMILY SSF51206 7 134 2.23E-29 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Gene3D G3DSA:3.10.580.10 144 281 1.2E-34 T 15-10-2018 VIBNI_A2011 b1017488869e307bc973a32ee8a43e21 627 Gene3D G3DSA:2.60.120.10 1 143 8.1E-25 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2235 b363ca4cb8d92fe7d78e344d0f35337c 301 Gene3D G3DSA:3.40.50.1100 33 139 1.4E-25 T 15-10-2018 VIBNI_A2235 b363ca4cb8d92fe7d78e344d0f35337c 301 SUPERFAMILY SSF53686 15 295 6.72E-50 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A2235 b363ca4cb8d92fe7d78e344d0f35337c 301 PIRSF PIRSF006278 3 296 1.7E-21 T 15-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VIBNI_A2235 b363ca4cb8d92fe7d78e344d0f35337c 301 Gene3D G3DSA:3.40.50.1100 16 286 1.4E-25 T 15-10-2018 VIBNI_A3535 4b97aec3c6449a463cf97eb1365a79b0 84 Pfam PF11112 Pyocin activator protein PrtN 3 75 1.4E-24 T 15-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Gene3D G3DSA:1.20.120.530 153 278 1.3E-23 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Gene3D G3DSA:1.20.120.530 80 151 1.8E-7 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 9.3E-115 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Gene3D G3DSA:1.10.10.10 1 79 2.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.4E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 SUPERFAMILY SSF48008 79 269 2.62E-56 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 SMART SM00345 12 71 2.0E-22 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 SUPERFAMILY SSF46785 12 74 1.62E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 135.59 T 15-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2390 62208577528dcc466aed4a289d524ee4 279 Pfam PF07840 FadR C-terminal domain 72 274 1.3E-66 T 15-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VIBNI_B1852 2f4363b832d7c2691975af6dd7fa1ce4 244 Gene3D G3DSA:3.20.20.370 1 243 5.7E-95 T 15-10-2018 VIBNI_B1852 2f4363b832d7c2691975af6dd7fa1ce4 244 Pfam PF03746 LamB/YcsF family 2 236 2.2E-94 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VIBNI_B1852 2f4363b832d7c2691975af6dd7fa1ce4 244 SUPERFAMILY SSF88713 1 236 1.56E-89 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A0673 6ce910bd03ba0c1a0ab9ca13d64ca481 310 Gene3D G3DSA:3.40.50.2300 128 266 2.3E-72 T 15-10-2018 VIBNI_A0673 6ce910bd03ba0c1a0ab9ca13d64ca481 310 SUPERFAMILY SSF53822 28 306 1.48E-74 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0673 6ce910bd03ba0c1a0ab9ca13d64ca481 310 Gene3D G3DSA:3.40.50.2300 33 283 2.3E-72 T 15-10-2018 VIBNI_A0673 6ce910bd03ba0c1a0ab9ca13d64ca481 310 Pfam PF13407 Periplasmic binding protein domain 30 283 1.4E-56 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0214 78d0d5302991ae06a1a8aeee70b98271 290 Gene3D G3DSA:1.10.3720.10 64 288 1.3E-35 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0214 78d0d5302991ae06a1a8aeee70b98271 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 286 2.5E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0214 78d0d5302991ae06a1a8aeee70b98271 290 SUPERFAMILY SSF161098 25 277 2.52E-42 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0214 78d0d5302991ae06a1a8aeee70b98271 290 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 20 286 4.6E-98 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VIBNI_A2967 453bbc1af07cdae9c5f7acd6e12bd687 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 9.8E-31 T 15-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VIBNI_A2967 453bbc1af07cdae9c5f7acd6e12bd687 149 SUPERFAMILY SSF102400 1 145 3.4E-38 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VIBNI_A2967 453bbc1af07cdae9c5f7acd6e12bd687 149 Gene3D G3DSA:3.40.50.10110 1 146 3.3E-40 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 Pfam PF13185 GAF domain 18 157 4.4E-7 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 Gene3D G3DSA:3.30.450.40 13 163 2.3E-12 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 Gene3D G3DSA:1.10.3210.10 164 375 9.4E-49 T 15-10-2018 VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 SMART SM00471 183 331 1.9E-4 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 SUPERFAMILY SSF109604 176 359 3.4E-29 T 15-10-2018 VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 SUPERFAMILY SSF55781 21 159 3.36E-14 T 15-10-2018 VIBNI_A0516 1bb70a096389fbe446f0eaa2c1b546af 384 Pfam PF01966 HD domain 188 321 3.2E-12 T 15-10-2018 IPR006674 HD domain VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 Gene3D G3DSA:2.40.50.140 282 342 1.4E-12 T 15-10-2018 VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 SMART SM00382 26 209 2.2E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 SUPERFAMILY SSF50331 236 349 5.53E-8 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 Pfam PF00005 ABC transporter 18 159 4.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 Gene3D G3DSA:3.40.50.300 1 219 1.4E-66 T 15-10-2018 VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 SUPERFAMILY SSF52540 1 240 2.79E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 Gene3D G3DSA:2.40.50.940 220 349 1.4E-12 T 15-10-2018 VIBNI_B0874 37a967f58cf65112669534bb12454ed7 355 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 SUPERFAMILY SSF51735 3 249 3.25E-81 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 Gene3D G3DSA:3.40.50.720 1 251 3.6E-83 T 15-10-2018 VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.9E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.8E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 9.8E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.8E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 168 2.3E-4 T 15-10-2018 VIBNI_A1207 65107e2f223884a9a71c72d7596128e2 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 249 1.7E-68 T 15-10-2018 VIBNI_A2344 255aaa02e66c053bd95dc30e56ced742 171 Pfam PF13518 Helix-turn-helix domain 64 115 6.2E-9 T 15-10-2018 VIBNI_A2344 255aaa02e66c053bd95dc30e56ced742 171 SUPERFAMILY SSF46689 61 157 8.24E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2344 255aaa02e66c053bd95dc30e56ced742 171 SUPERFAMILY SSF48295 2 56 4.29E-7 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VIBNI_B2141 3576580426c2d7484221010b3145bbfb 463 Gene3D G3DSA:3.20.20.70 140 392 2.6E-99 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B2141 3576580426c2d7484221010b3145bbfb 463 SUPERFAMILY SSF51690 143 461 7.85E-45 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VIBNI_B2141 3576580426c2d7484221010b3145bbfb 463 PIRSF PIRSF005943 3 463 3.9E-187 T 15-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 VIBNI_B2141 3576580426c2d7484221010b3145bbfb 463 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 174 443 1.9E-70 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VIBNI_A1736 aebe9e9ff04b9402ab29cb20aa71096c 309 SUPERFAMILY SSF52402 18 237 3.83E-56 T 15-10-2018 VIBNI_A1736 aebe9e9ff04b9402ab29cb20aa71096c 309 Gene3D G3DSA:3.40.50.620 2 264 6.5E-50 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A1736 aebe9e9ff04b9402ab29cb20aa71096c 309 PIRSF PIRSF004976 1 272 6.0E-76 T 15-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VIBNI_A1736 aebe9e9ff04b9402ab29cb20aa71096c 309 Pfam PF01171 PP-loop family 43 204 2.7E-15 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VIBNI_A1736 aebe9e9ff04b9402ab29cb20aa71096c 309 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.828 T 15-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 Gene3D G3DSA:1.10.357.10 65 193 6.3E-16 T 15-10-2018 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.7E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 SUPERFAMILY SSF48498 78 190 3.5E-20 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 165 5.4E-9 T 15-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 SUPERFAMILY SSF46689 3 81 6.16E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1430 8fa46f4a92954c7c4ed174cea64c2aa6 196 Gene3D G3DSA:1.10.10.60 1 64 2.7E-22 T 15-10-2018 VIBNI_A0381 74683304fd57daae825bf9c7e6dd7b5e 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.727 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase VIBNI_A0381 74683304fd57daae825bf9c7e6dd7b5e 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 171 2.7E-47 T 15-10-2018 IPR002786 Non-canonical purine NTP phosphatase VIBNI_A0381 74683304fd57daae825bf9c7e6dd7b5e 175 SUPERFAMILY SSF52972 1 171 3.36E-59 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A0381 74683304fd57daae825bf9c7e6dd7b5e 175 Pfam PF01931 Protein of unknown function DUF84 7 166 5.2E-57 T 15-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VIBNI_A0381 74683304fd57daae825bf9c7e6dd7b5e 175 Gene3D G3DSA:3.90.950.10 1 174 5.7E-70 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VIBNI_A3003 bfe3bd4daa22e940a03ddf0be6ccd1bc 214 Pfam PF04350 Pilus assembly protein, PilO 80 178 3.5E-8 T 15-10-2018 IPR007445 Pilus assembly protein, PilO VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 Gene3D G3DSA:3.40.190.10 200 513 1.8E-137 T 15-10-2018 VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 Gene3D G3DSA:3.10.105.10 279 504 1.8E-137 T 15-10-2018 VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 SUPERFAMILY SSF53850 25 533 1.09E-131 T 15-10-2018 VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 PIRSF PIRSF002741 4 534 1.1E-126 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 Gene3D G3DSA:3.90.76.10 36 199 1.8E-137 T 15-10-2018 VIBNI_B1662 babecb8e2f3d4344040b7a39bc0f6886 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 444 1.5E-102 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B0433 23d41554157039bcfa59a9ff03f1009d 270 Gene3D G3DSA:3.40.50.720 1 235 7.5E-48 T 15-10-2018 VIBNI_B0433 23d41554157039bcfa59a9ff03f1009d 270 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 160 8.0E-24 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_B0433 23d41554157039bcfa59a9ff03f1009d 270 SUPERFAMILY SSF51735 1 238 2.44E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 Pfam PF03466 LysR substrate binding domain 122 269 3.3E-7 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 Gene3D G3DSA:3.40.190.10 95 188 2.1E-6 T 15-10-2018 VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 SUPERFAMILY SSF53850 102 270 6.33E-14 T 15-10-2018 VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.5E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 SUPERFAMILY SSF46785 4 80 8.84E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0587 0dade1f61727dfbccb96ee22ad49f846 271 Gene3D G3DSA:1.10.10.10 6 92 1.7E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 SUPERFAMILY SSF51182 6 254 9.34E-71 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 PIRSF PIRSF036628 1 271 6.9E-108 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 18 265 1.4E-98 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 Gene3D G3DSA:2.60.120.10 15 124 5.4E-34 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 Gene3D G3DSA:2.60.120.10 125 271 1.5E-61 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2175 d8bea2cab001b6f75d2d4fe116e000ff 271 Pfam PF04962 KduI/IolB family 7 265 4.1E-107 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0974 974f7c39f15d675cb4815688dc9da85a 266 Gene3D G3DSA:3.40.50.300 1 262 2.0E-57 T 15-10-2018 VIBNI_B0974 974f7c39f15d675cb4815688dc9da85a 266 SMART SM00382 34 243 9.0E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0974 974f7c39f15d675cb4815688dc9da85a 266 Pfam PF00005 ABC transporter 25 187 2.6E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0974 974f7c39f15d675cb4815688dc9da85a 266 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0974 974f7c39f15d675cb4815688dc9da85a 266 SUPERFAMILY SSF52540 8 248 1.36E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2165 cd18ecd7f45c616cf8baf313571fd975 178 Gene3D G3DSA:3.40.50.300 2 175 7.0E-21 T 15-10-2018 VIBNI_A2165 cd18ecd7f45c616cf8baf313571fd975 178 SUPERFAMILY SSF52540 3 153 5.68E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2165 cd18ecd7f45c616cf8baf313571fd975 178 Pfam PF13671 AAA domain 4 142 1.1E-18 T 15-10-2018 VIBNI_A0422 3924a8cefebc0a04124cf5c0f1b66c4a 506 Gene3D G3DSA:3.40.50.1820 192 506 8.4E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0422 3924a8cefebc0a04124cf5c0f1b66c4a 506 SUPERFAMILY SSF53474 197 481 2.39E-31 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0422 3924a8cefebc0a04124cf5c0f1b66c4a 506 Pfam PF07859 alpha/beta hydrolase fold 222 371 3.7E-9 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 VIBNI_A3772 1861faac40a9e2ce9ba0a88c6f22b676 251 Gene3D G3DSA:3.40.50.10090 4 240 9.9E-68 T 15-10-2018 VIBNI_A3772 1861faac40a9e2ce9ba0a88c6f22b676 251 Gene3D G3DSA:3.40.50.10090 32 161 9.9E-68 T 15-10-2018 VIBNI_A3772 1861faac40a9e2ce9ba0a88c6f22b676 251 SUPERFAMILY SSF69618 1 241 3.79E-50 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3772 1861faac40a9e2ce9ba0a88c6f22b676 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 16 226 4.3E-34 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 SUPERFAMILY SSF46955 1 107 7.33E-25 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 Pfam PF13411 MerR HTH family regulatory protein 2 68 1.4E-16 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 SMART SM00422 1 69 2.8E-19 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 Gene3D G3DSA:1.10.1660.10 1 124 4.6E-25 T 15-10-2018 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.9E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.9E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0245 ed16d556ddda530014521cbd88381400 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.9E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 SUPERFAMILY SSF46785 2 86 2.35E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 Gene3D G3DSA:3.40.190.290 90 292 1.8E-62 T 15-10-2018 VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 Pfam PF03466 LysR substrate binding domain 88 291 5.7E-41 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 SUPERFAMILY SSF53850 89 292 1.99E-42 T 15-10-2018 VIBNI_B1990 684fde39ef559ef31f92ffd255417b09 299 Gene3D G3DSA:1.10.10.10 1 84 6.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1164 1f2f9c26b3f2661d18f78f3b86e9014d 141 Gene3D G3DSA:3.40.50.300 28 128 1.7E-7 T 15-10-2018 VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 Gene3D G3DSA:3.30.1360.40 4 85 3.1E-13 T 15-10-2018 VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 SUPERFAMILY SSF160467 6 98 9.29E-14 T 15-10-2018 VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 SMART SM00796 4 207 1.2E-63 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 SUPERFAMILY SSF50891 94 224 5.69E-38 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 5 202 2.1E-59 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_B1124 aed01952c1e23924606055a008d9ba70 233 Gene3D G3DSA:2.40.100.10 93 233 3.6E-48 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B2054 b3bcfada99245c56cb72bed84aacb831 340 SMART SM00267 168 338 1.6E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2054 b3bcfada99245c56cb72bed84aacb831 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 1.4E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2054 b3bcfada99245c56cb72bed84aacb831 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 336 1.2E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2054 b3bcfada99245c56cb72bed84aacb831 340 SUPERFAMILY SSF55073 184 336 2.35E-42 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B2054 b3bcfada99245c56cb72bed84aacb831 340 Gene3D G3DSA:3.30.70.270 165 337 1.2E-49 T 15-10-2018 VIBNI_A1921 99d2a304fd47b94455c2a2c2b17bd379 395 Gene3D G3DSA:3.40.50.300 145 382 5.9E-15 T 15-10-2018 VIBNI_A1921 99d2a304fd47b94455c2a2c2b17bd379 395 SUPERFAMILY SSF52540 146 382 7.08E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 Gene3D G3DSA:3.40.50.1000 2 307 6.3E-169 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 99 307 2.9E-85 T 15-10-2018 VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 Gene3D G3DSA:3.30.70.2020 5 319 6.3E-169 T 15-10-2018 VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 104 274 4.7E-29 T 15-10-2018 VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 SUPERFAMILY SSF56784 100 307 1.0E-49 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 Gene3D G3DSA:1.10.150.210 112 174 6.3E-169 T 15-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VIBNI_A0498 333d9253457ed14704f3742c8d9b8e4a 319 Pfam PF00702 haloacid dehalogenase-like hydrolase 104 276 5.3E-17 T 15-10-2018 VIBNI_A1789 3e75c677b3e6e3857c63a4d6aa0824f8 75 Pfam PF11197 Protein of unknown function (DUF2835) 7 73 3.9E-28 T 15-10-2018 IPR021363 Protein of unknown function DUF2835 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.2E-15 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 SUPERFAMILY SSF46689 4 70 1.44E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 Gene3D G3DSA:1.10.357.10 3 191 2.2E-54 T 15-10-2018 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 1.1E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 1.1E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0811 e21cdb576a2cf260d9bcffb35879d867 192 SUPERFAMILY SSF48498 80 183 9.45E-14 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1503 0edf2c79c36ae8a5d11353b7d9b27122 338 SUPERFAMILY SSF53850 31 329 1.86E-61 T 15-10-2018 VIBNI_B1503 0edf2c79c36ae8a5d11353b7d9b27122 338 Gene3D G3DSA:3.40.190.10 122 265 5.4E-90 T 15-10-2018 VIBNI_B1503 0edf2c79c36ae8a5d11353b7d9b27122 338 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 328 3.0E-101 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_B1503 0edf2c79c36ae8a5d11353b7d9b27122 338 Gene3D G3DSA:3.40.190.10 34 328 5.4E-90 T 15-10-2018 VIBNI_B1503 0edf2c79c36ae8a5d11353b7d9b27122 338 Pfam PF16868 NMT1-like family 34 328 1.9E-115 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VIBNI_B0581 cc1db2cda98e01c9184823f5db42951d 267 SUPERFAMILY SSF56300 1 246 1.82E-52 T 15-10-2018 VIBNI_B0581 cc1db2cda98e01c9184823f5db42951d 267 Pfam PF00149 Calcineurin-like phosphoesterase 2 194 6.3E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_B0581 cc1db2cda98e01c9184823f5db42951d 267 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 250 31.936 T 15-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VIBNI_B0581 cc1db2cda98e01c9184823f5db42951d 267 Gene3D G3DSA:3.30.750.180 102 227 2.9E-71 T 15-10-2018 VIBNI_B0581 cc1db2cda98e01c9184823f5db42951d 267 Gene3D G3DSA:3.60.21.40 1 234 2.9E-71 T 15-10-2018 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SMART SM00091 21 84 1.4E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Pfam PF13188 PAS domain 21 66 8.1E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Gene3D G3DSA:3.30.450.20 14 112 5.4E-7 T 15-10-2018 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SMART SM00387 234 340 2.6E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SUPERFAMILY SSF47384 114 191 8.63E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SMART SM00388 125 191 2.3E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SUPERFAMILY SSF55874 180 342 7.6E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Gene3D G3DSA:1.10.287.130 113 188 1.4E-8 T 15-10-2018 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 339 7.0E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Gene3D G3DSA:3.30.565.10 194 344 8.6E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 1.0E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0720 555c437270a827aa4c72b597efe34f41 346 SUPERFAMILY SSF55785 16 88 7.23E-9 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3433 01a4cf05d99c4a3681c2eb0ce7f102e6 297 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 290 4.7E-42 T 15-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VIBNI_A3433 01a4cf05d99c4a3681c2eb0ce7f102e6 297 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 245 4.9E-23 T 15-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VIBNI_A2949 cacfdbbba6370050c5f9c511a8e3ecc6 147 SUPERFAMILY SSF55804 1 147 6.67E-40 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_A2949 cacfdbbba6370050c5f9c511a8e3ecc6 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain VIBNI_A2949 cacfdbbba6370050c5f9c511a8e3ecc6 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.5E-52 T 15-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VIBNI_A2949 cacfdbbba6370050c5f9c511a8e3ecc6 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 6.5E-37 T 15-10-2018 IPR002178 PTS EIIA type-2 domain VIBNI_A2949 cacfdbbba6370050c5f9c511a8e3ecc6 147 Gene3D G3DSA:3.40.930.10 1 147 5.5E-52 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VIBNI_B0586 5e751a35398256407132a1e95a65419c 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.3E-17 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0586 5e751a35398256407132a1e95a65419c 138 SUPERFAMILY SSF54593 3 129 1.48E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0586 5e751a35398256407132a1e95a65419c 138 Gene3D G3DSA:3.10.180.10 2 132 9.4E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A3101 fce0e16e909f6d312f28ad8428741055 90 Pfam PF11747 Killing trait 9 76 4.8E-24 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.0E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 8.7E-55 T 15-10-2018 VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 Gene3D G3DSA:3.40.50.720 2 255 2.4E-72 T 15-10-2018 VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.8E-30 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1933 a0bfbae4fde8a979a7da42faef4d45a9 255 SUPERFAMILY SSF51735 10 254 1.96E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3685 dd4e8efcf0ab7f91265eeae459d482a5 344 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 340 1.1E-144 T 15-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VIBNI_A3685 dd4e8efcf0ab7f91265eeae459d482a5 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 321 3.7E-67 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VIBNI_A3685 dd4e8efcf0ab7f91265eeae459d482a5 344 Gene3D G3DSA:3.40.50.2000 1 148 1.4E-54 T 15-10-2018 VIBNI_A3685 dd4e8efcf0ab7f91265eeae459d482a5 344 Gene3D G3DSA:3.40.50.2000 162 343 4.2E-58 T 15-10-2018 VIBNI_A3685 dd4e8efcf0ab7f91265eeae459d482a5 344 SUPERFAMILY SSF53756 1 339 3.69E-99 T 15-10-2018 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 PRINTS PR00050 Cold shock protein signature 6 21 2.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 PRINTS PR00050 Cold shock protein signature 42 60 2.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 PRINTS PR00050 Cold shock protein signature 27 36 2.1E-18 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 PIRSF PIRSF002599 1 69 1.2E-26 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 15-10-2018 IPR019844 Cold-shock conserved site VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.7E-32 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 Gene3D G3DSA:2.40.50.140 1 67 1.4E-31 T 15-10-2018 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 SMART SM00357 5 69 2.1E-32 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_B1832 19ab8d543f2caf57cfda376d3e5c7b5b 69 SUPERFAMILY SSF50249 3 68 1.24E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SUPERFAMILY SSF50998 34 324 2.12E-45 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 Gene3D G3DSA:2.130.10.10 225 327 1.6E-10 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 15-10-2018 IPR019775 WD40 repeat, conserved site VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 Gene3D G3DSA:2.130.10.10 20 224 1.1E-27 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SMART SM00320 192 230 0.33 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SMART SM00320 151 189 2.1E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SMART SM00320 233 274 0.1 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SMART SM00320 65 106 320.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 SMART SM00320 285 323 150.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_A3191 6df1d590fab0dbecb453625b03054a2d 327 Pfam PF00400 WD domain, G-beta repeat 157 189 3.3E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 Gene3D G3DSA:3.30.390.10 7 377 3.0E-118 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 SMART SM00922 153 248 8.0E-9 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 SUPERFAMILY SSF51604 124 379 1.01E-61 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 35 124 1.8E-11 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 SUPERFAMILY SSF54826 3 124 9.09E-25 T 15-10-2018 VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 Gene3D G3DSA:3.20.20.120 125 364 3.0E-118 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B0765 b95a74593688ce4f7de0d6352ff8a2ee 412 Pfam PF13378 Enolase C-terminal domain-like 157 368 1.0E-43 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A1945 99334fea5d1f0ef19ea1852df7b5bb6d 162 SUPERFAMILY SSF55729 2 148 4.4E-35 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1945 99334fea5d1f0ef19ea1852df7b5bb6d 162 Pfam PF13302 Acetyltransferase (GNAT) domain 10 148 1.5E-28 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1945 99334fea5d1f0ef19ea1852df7b5bb6d 162 Gene3D G3DSA:3.40.630.30 2 159 3.1E-34 T 15-10-2018 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 Pfam PF01555 DNA methylase 76 356 4.7E-47 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 298 315 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 89 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 130 150 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 317 335 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 340 360 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 SUPERFAMILY SSF53335 52 361 3.74E-63 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0345 c7c70a437fde48b993ae95d45af561d0 597 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 79 85 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 Pfam PF01555 DNA methylase 76 356 4.7E-47 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 298 315 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 89 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 130 150 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 317 335 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 340 360 6.6E-20 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 SUPERFAMILY SSF53335 52 361 3.74E-63 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B1962 c7c70a437fde48b993ae95d45af561d0 597 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 79 85 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_B0471 7388f3a319020b07ad6abf18d9e08497 328 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 323 1.4E-39 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_B0471 7388f3a319020b07ad6abf18d9e08497 328 Gene3D G3DSA:3.90.850.10 1 328 9.7E-135 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B0471 7388f3a319020b07ad6abf18d9e08497 328 SUPERFAMILY SSF56529 76 323 5.23E-59 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.256 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.5E-31 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 3.6E-50 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 15-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 Gene3D G3DSA:3.100.10.10 70 144 9.3E-14 T 15-10-2018 VIBNI_A3159 b9678cfdc63233674bd9391ba0da96b8 144 SUPERFAMILY SSF52080 4 143 4.58E-47 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 Pfam PF00455 DeoR C terminal sensor domain 75 233 7.0E-51 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 SMART SM00420 6 58 8.8E-14 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 Gene3D G3DSA:1.10.10.10 1 52 1.2E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 SUPERFAMILY SSF46785 4 69 1.65E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.0E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 SMART SM01134 73 234 1.2E-65 T 15-10-2018 VIBNI_A0979 b479f3461cded35423ea2beee225022d 258 SUPERFAMILY SSF100950 74 234 3.49E-31 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 Gene3D G3DSA:3.50.50.60 5 303 2.4E-99 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 Gene3D G3DSA:3.50.50.60 111 234 2.4E-99 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 Pfam PF14759 Reductase C-terminal 315 402 2.8E-13 T 15-10-2018 IPR028202 Reductase, C-terminal VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 Gene3D G3DSA:3.30.390.30 311 403 3.2E-13 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 296 5.3E-64 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 SUPERFAMILY SSF55424 310 402 7.55E-13 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 8.2E-30 T 15-10-2018 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 8.2E-30 T 15-10-2018 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 8.2E-30 T 15-10-2018 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.2E-30 T 15-10-2018 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 243 8.2E-30 T 15-10-2018 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 SUPERFAMILY SSF51905 1 305 8.25E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 99 107 2.3E-14 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 280 2.3E-14 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 2.3E-14 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 229 250 2.3E-14 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_B2032 c0eef4a8b4b268acdc1757ab60f7fb24 403 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 2.3E-14 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A0256 27872a7496a7f8224635125ae24fe25c 398 Gene3D G3DSA:3.40.190.10 21 387 5.1E-28 T 15-10-2018 VIBNI_A0256 27872a7496a7f8224635125ae24fe25c 398 Pfam PF01547 Bacterial extracellular solute-binding protein 27 302 7.2E-13 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A0256 27872a7496a7f8224635125ae24fe25c 398 SUPERFAMILY SSF53850 9 380 3.46E-33 T 15-10-2018 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 Gene3D G3DSA:1.10.287.610 103 150 2.9E-91 T 15-10-2018 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 Gene3D G3DSA:3.40.50.10490 8 219 2.9E-91 T 15-10-2018 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 Pfam PF00318 Ribosomal protein S2 9 224 3.3E-93 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.0E-37 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.4E-107 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 SUPERFAMILY SSF52313 6 231 9.55E-95 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VIBNI_A2504 9b4f89e8baf9e278df3ae49f7a6133f6 244 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.122 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 SUPERFAMILY SSF53383 6 415 9.11E-184 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 Gene3D G3DSA:3.90.1150.10 10 393 1.8E-185 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 PIRSF PIRSF000412 1 415 1.4E-167 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 Pfam PF00464 Serine hydroxymethyltransferase 9 385 9.8E-182 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 Gene3D G3DSA:3.40.640.10 37 288 1.8E-185 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_A2725 4dfa64aaa013e09237ee13caedcea4ed 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.32 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:1.20.1580.10 692 830 2.2E-140 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:3.40.50.300 617 936 2.2E-140 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:1.10.8.280 287 403 8.3E-246 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:3.40.50.300 6 594 8.3E-246 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Pfam PF00005 ABC transporter 623 860 1.8E-10 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:3.30.190.20 130 244 8.3E-246 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 SUPERFAMILY SSF52540 3 569 9.32E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.934 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 Gene3D G3DSA:1.20.1580.10 90 492 8.3E-246 T 15-10-2018 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3032 79c8c9dd8df29352bc16e540ea605c9f 940 SUPERFAMILY SSF52540 621 913 6.66E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 Gene3D G3DSA:3.30.70.1560 113 211 1.1E-39 T 15-10-2018 VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 84 98 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 Pfam PF00849 RNA pseudouridylate synthase 49 192 9.7E-16 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 SUPERFAMILY SSF55120 42 223 1.07E-43 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 Gene3D G3DSA:3.30.70.580 38 112 7.7E-26 T 15-10-2018 VIBNI_A2134 91dc2bdf5cf12308f4e6b64767e2e9da 224 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 53 223 1.2E-57 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A1737 cf127360c8b9b3e477910f936a8fc7cc 313 SUPERFAMILY SSF52402 4 157 2.18E-26 T 15-10-2018 VIBNI_A1737 cf127360c8b9b3e477910f936a8fc7cc 313 Gene3D G3DSA:3.40.50.12370 1 312 6.6E-114 T 15-10-2018 VIBNI_A1737 cf127360c8b9b3e477910f936a8fc7cc 313 SUPERFAMILY SSF52402 157 308 3.01E-24 T 15-10-2018 VIBNI_A1737 cf127360c8b9b3e477910f936a8fc7cc 313 Pfam PF00582 Universal stress protein family 4 148 2.4E-15 T 15-10-2018 IPR006016 UspA VIBNI_A1737 cf127360c8b9b3e477910f936a8fc7cc 313 Pfam PF00582 Universal stress protein family 177 301 2.1E-14 T 15-10-2018 IPR006016 UspA VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 SMART SM00855 11 154 1.6E-18 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 Gene3D G3DSA:3.40.50.1240 9 190 7.9E-39 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 160 6.9E-32 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 14 23 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 SUPERFAMILY SSF53254 11 161 2.23E-37 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B0514 789d22c1a1ca0fb791699f91d2a013e3 199 PIRSF PIRSF000709 8 105 0.0017 T 15-10-2018 VIBNI_A2435 80afc3c8ec30e2a9c6ce7fe4bf4bef1e 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 4.2E-114 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A2435 80afc3c8ec30e2a9c6ce7fe4bf4bef1e 425 PIRSF PIRSF006066 1 425 5.7E-139 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2435 80afc3c8ec30e2a9c6ce7fe4bf4bef1e 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.0E-126 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A0331 8a374421af3b2223d326e6bd636841dc 265 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 4.2E-47 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 7.5E-129 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 266 292 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 94 118 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 129 151 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 238 265 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 31 47 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PRINTS PR00073 Coprogen oxidase signature 166 195 2.1E-67 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 PIRSF PIRSF000166 1 305 8.0E-126 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.289 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 15-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 Gene3D G3DSA:3.40.1500.10 1 305 6.2E-134 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A3828 19b6338b830ea6053055c8d902de7910 305 SUPERFAMILY SSF102886 5 305 4.19E-134 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 262 4.3E-62 T 15-10-2018 VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.8E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 Gene3D G3DSA:3.40.50.720 1 265 2.3E-80 T 15-10-2018 VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 SUPERFAMILY SSF51735 6 264 9.87E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0671 55415538c6a566fc502e3634b137cc3b 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1751 207fc7d1b9bf731be3f71105f2296871 270 Gene3D G3DSA:1.10.1660.10 3 77 1.5E-24 T 15-10-2018 VIBNI_B1751 207fc7d1b9bf731be3f71105f2296871 270 SMART SM00422 8 77 1.8E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B1751 207fc7d1b9bf731be3f71105f2296871 270 Pfam PF13411 MerR HTH family regulatory protein 9 75 5.7E-18 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B1751 207fc7d1b9bf731be3f71105f2296871 270 SUPERFAMILY SSF46955 8 102 1.97E-18 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 Gene3D G3DSA:3.20.20.450 397 644 3.8E-42 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 SUPERFAMILY SSF141868 408 636 3.4E-40 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 376 1.6E-14 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 Gene3D G3DSA:3.30.70.270 212 387 1.4E-15 T 15-10-2018 VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 40 132 1.6E-21 T 15-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 SMART SM00267 216 386 1.8E-6 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 Pfam PF00563 EAL domain 407 636 3.0E-47 T 15-10-2018 IPR001633 EAL domain VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 SUPERFAMILY SSF55073 233 387 1.96E-13 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A3005 bea9f8c9caa94cfa7a875450ec5d2daf 661 SMART SM00052 397 647 4.7E-15 T 15-10-2018 IPR001633 EAL domain VIBNI_B0684 41d9a78716ca1b542a6d26e484b1fbe1 409 Gene3D G3DSA:3.40.50.2300 14 142 2.5E-9 T 15-10-2018 VIBNI_B0684 41d9a78716ca1b542a6d26e484b1fbe1 409 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 153 208 1.2E-6 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VIBNI_B0684 41d9a78716ca1b542a6d26e484b1fbe1 409 Gene3D G3DSA:3.40.50.300 150 380 1.3E-24 T 15-10-2018 VIBNI_B0684 41d9a78716ca1b542a6d26e484b1fbe1 409 SUPERFAMILY SSF52540 152 373 3.4E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 Gene3D G3DSA:1.10.8.260 263 323 2.0E-127 T 15-10-2018 IPR023166 HI0933-like insert domain superfamily VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 SUPERFAMILY SSF160996 191 339 9.29E-42 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 SUPERFAMILY SSF51905 1 394 4.97E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 2.9E-129 T 15-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 Gene3D G3DSA:2.40.30.10 189 340 2.0E-127 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 5.9E-9 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.9E-9 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 5.9E-9 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 Pfam PF03486 HI0933-like protein 5 393 4.9E-155 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.4E-5 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.4E-5 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.4E-5 T 15-10-2018 VIBNI_A3448 e20b92ca6c274ce4ed59a1df95cf638a 395 Gene3D G3DSA:3.50.50.60 8 389 2.0E-127 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 SUPERFAMILY SSF46785 21 92 7.37E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 Pfam PF07729 FCD domain 113 240 1.9E-17 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 Gene3D G3DSA:1.10.10.10 25 90 1.9E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 81 2.4E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 SMART SM00345 27 88 4.1E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 SMART SM00895 113 242 2.7E-19 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 SUPERFAMILY SSF48008 111 248 6.8E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0572 1d7c26d7b53d53bcbf274843e6787962 265 Gene3D G3DSA:1.20.120.530 96 257 6.6E-23 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Gene3D G3DSA:1.10.150.310 499 630 8.1E-50 T 15-10-2018 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Pfam PF16921 Tex protein YqgF-like domain 327 451 2.0E-55 T 15-10-2018 IPR032639 Tex protein, YqgF-like domain VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SMART SM00732 326 424 1.4E-36 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Pfam PF09371 Tex-like protein N-terminal domain 9 192 3.2E-69 T 15-10-2018 IPR018974 Tex-like protein, N-terminal VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Gene3D G3DSA:3.30.420.140 325 451 1.3E-158 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SUPERFAMILY SSF158832 3 321 9.15E-119 T 15-10-2018 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Gene3D G3DSA:2.40.50.140 631 725 9.0E-29 T 15-10-2018 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SUPERFAMILY SSF47781 470 557 8.12E-27 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.6E-27 T 15-10-2018 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SUPERFAMILY SSF47781 560 632 7.78E-19 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Gene3D G3DSA:1.10.3500.10 112 498 1.3E-158 T 15-10-2018 IPR023323 Tex-like domain superfamily VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Pfam PF00575 S1 RNA binding domain 649 720 3.2E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SMART SM00316 649 720 6.5E-25 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SUPERFAMILY SSF53098 322 469 4.32E-50 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 SUPERFAMILY SSF50249 642 720 3.51E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3727 3b5442865753d4ee32bdb436e58cfd7c 774 Gene3D G3DSA:1.10.10.650 1 109 2.7E-40 T 15-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VIBNI_A0909 449d9cbde6cf227df6b1245a50d4f090 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 9.2E-89 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VIBNI_A0909 449d9cbde6cf227df6b1245a50d4f090 193 PIRSF PIRSF006102 1 193 6.5E-63 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0909 449d9cbde6cf227df6b1245a50d4f090 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 7.5E-61 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0909 449d9cbde6cf227df6b1245a50d4f090 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.148 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VIBNI_B0349 3421ac4bdd1cdd572f5a0eba87ef9ec6 474 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 8 469 6.6E-118 T 15-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VIBNI_B0349 3421ac4bdd1cdd572f5a0eba87ef9ec6 474 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 224 469 1.9E-81 T 15-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VIBNI_B0349 3421ac4bdd1cdd572f5a0eba87ef9ec6 474 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 124 9.1E-25 T 15-10-2018 IPR010657 ImpA, N-terminal VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 Gene3D G3DSA:1.20.1560.10 1 326 3.3E-50 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 Pfam PF00005 ABC transporter 355 502 3.5E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 Pfam PF00664 ABC transporter transmembrane region 24 287 4.1E-26 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 SMART SM00382 364 548 1.2E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 SUPERFAMILY SSF90123 10 326 9.94E-59 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 Gene3D G3DSA:3.40.50.300 330 587 9.6E-83 T 15-10-2018 VIBNI_B1519 c15232b56d398786b7e21e3400386bfe 590 SUPERFAMILY SSF52540 333 572 2.36E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1973 96d0b9a9e8e788d5ac5540c12195c853 419 Gene3D G3DSA:1.10.443.10 181 383 6.3E-21 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_B1973 96d0b9a9e8e788d5ac5540c12195c853 419 Pfam PF00589 Phage integrase family 183 379 1.6E-14 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_B1973 96d0b9a9e8e788d5ac5540c12195c853 419 SUPERFAMILY SSF56349 183 382 1.56E-19 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A0334 96d0b9a9e8e788d5ac5540c12195c853 419 Gene3D G3DSA:1.10.443.10 181 383 6.3E-21 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A0334 96d0b9a9e8e788d5ac5540c12195c853 419 Pfam PF00589 Phage integrase family 183 379 1.6E-14 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A0334 96d0b9a9e8e788d5ac5540c12195c853 419 SUPERFAMILY SSF56349 183 382 1.56E-19 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 7.1E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 Gene3D G3DSA:1.10.357.10 1 204 8.2E-68 T 15-10-2018 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 SUPERFAMILY SSF46689 8 84 1.64E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.5E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.5E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0184 765b9fdf56b21c5148138118f38a9410 204 SUPERFAMILY SSF48498 89 197 6.3E-10 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 PRINTS PR00095 Anthranilate synthase component I signature 294 307 1.0E-16 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 PRINTS PR00095 Anthranilate synthase component I signature 308 321 1.0E-16 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 PRINTS PR00095 Anthranilate synthase component I signature 403 417 1.0E-16 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 PRINTS PR00095 Anthranilate synthase component I signature 388 402 1.0E-16 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 155 2.0E-27 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 448 1.1E-120 T 15-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 Pfam PF00425 chorismate binding enzyme 193 446 5.3E-96 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 SUPERFAMILY SSF56322 14 455 2.09E-143 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A1981 3c56f98f3ceafb452a15a8354d8252e1 456 Gene3D G3DSA:3.60.120.10 5 455 2.4E-169 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A3065 091f674b78445e84de698026491d90aa 1199 SUPERFAMILY SSF69318 521 758 4.91E-16 T 15-10-2018 VIBNI_A3065 091f674b78445e84de698026491d90aa 1199 SUPERFAMILY SSF69318 817 1098 7.85E-9 T 15-10-2018 VIBNI_B1466 f0c8bb26a56cca43fc912cc45410ff19 247 Pfam PF00005 ABC transporter 37 185 2.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1466 f0c8bb26a56cca43fc912cc45410ff19 247 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1466 f0c8bb26a56cca43fc912cc45410ff19 247 Gene3D G3DSA:3.40.50.300 15 246 1.4E-68 T 15-10-2018 VIBNI_B1466 f0c8bb26a56cca43fc912cc45410ff19 247 SMART SM00382 46 233 2.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1466 f0c8bb26a56cca43fc912cc45410ff19 247 SUPERFAMILY SSF52540 17 241 7.53E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0601 3a558a66ab8d30250aeb2e59898a5172 231 Gene3D G3DSA:3.40.50.300 1 230 4.4E-60 T 15-10-2018 VIBNI_B0601 3a558a66ab8d30250aeb2e59898a5172 231 Pfam PF00005 ABC transporter 19 160 8.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0601 3a558a66ab8d30250aeb2e59898a5172 231 SMART SM00382 26 210 8.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0601 3a558a66ab8d30250aeb2e59898a5172 231 SUPERFAMILY SSF52540 2 223 2.72E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0601 3a558a66ab8d30250aeb2e59898a5172 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 8.8E-100 T 15-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE VIBNI_B0540 6e6d893687da9b65361a30684b14f842 147 Pfam PF13279 Thioesterase-like superfamily 16 134 5.0E-20 T 15-10-2018 VIBNI_B0540 6e6d893687da9b65361a30684b14f842 147 SUPERFAMILY SSF54637 7 135 3.84E-34 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B0540 6e6d893687da9b65361a30684b14f842 147 Gene3D G3DSA:3.10.129.10 2 138 2.0E-39 T 15-10-2018 VIBNI_A1849 29ce6298e5dc572264ec8e4d60fd8fac 467 SUPERFAMILY SSF56954 1 449 1.57E-72 T 15-10-2018 VIBNI_A1849 29ce6298e5dc572264ec8e4d60fd8fac 467 Gene3D G3DSA:1.20.1600.10 15 460 6.1E-67 T 15-10-2018 VIBNI_A1849 29ce6298e5dc572264ec8e4d60fd8fac 467 Pfam PF02321 Outer membrane efflux protein 28 246 9.5E-25 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A1849 29ce6298e5dc572264ec8e4d60fd8fac 467 Pfam PF02321 Outer membrane efflux protein 265 449 2.2E-29 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 Gene3D G3DSA:2.40.50.100 239 361 1.1E-15 T 15-10-2018 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 Gene3D G3DSA:3.40.50.300 1 238 2.5E-77 T 15-10-2018 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 Gene3D G3DSA:2.40.50.140 282 348 1.1E-15 T 15-10-2018 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 SUPERFAMILY SSF50331 237 363 8.26E-19 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 Pfam PF00005 ABC transporter 20 161 7.4E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 SMART SM00382 28 211 6.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1185 32e6b988de8db02864e78f9bab1a7738 365 SUPERFAMILY SSF52540 4 243 3.02E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0370 fd457ab34971b301000c07217662ba6f 371 SUPERFAMILY SSF53067 7 344 1.04E-25 T 15-10-2018 VIBNI_A0370 fd457ab34971b301000c07217662ba6f 371 Gene3D G3DSA:3.30.420.40 13 365 7.3E-133 T 15-10-2018 VIBNI_A0370 fd457ab34971b301000c07217662ba6f 371 Gene3D G3DSA:3.30.420.40 147 330 7.3E-133 T 15-10-2018 VIBNI_A0370 fd457ab34971b301000c07217662ba6f 371 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 6 370 41.518 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VIBNI_A0370 fd457ab34971b301000c07217662ba6f 371 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 2.1E-160 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VIBNI_A2742 e84f7b0145ed4afa4ce818ada44d78de 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 36 226 1.4E-84 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VIBNI_A2742 e84f7b0145ed4afa4ce818ada44d78de 232 Gene3D G3DSA:3.20.20.70 2 229 2.4E-78 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2742 e84f7b0145ed4afa4ce818ada44d78de 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 12 226 34.189 T 15-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VIBNI_A2742 e84f7b0145ed4afa4ce818ada44d78de 232 SUPERFAMILY SSF51366 14 224 3.3E-49 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 8.9E-71 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 440 2.2E-12 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 Gene3D G3DSA:3.30.420.40 242 488 1.6E-45 T 15-10-2018 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 PIRSF PIRSF000538 1 488 4.2E-96 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 Gene3D G3DSA:3.30.420.40 1 240 7.7E-67 T 15-10-2018 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 SUPERFAMILY SSF53067 3 251 4.57E-61 T 15-10-2018 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 SUPERFAMILY SSF53067 254 487 1.12E-35 T 15-10-2018 VIBNI_B0723 a6fcda189c77c8bb5c6bcdb61a86879f 488 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 Gene3D G3DSA:3.40.630.30 296 444 3.5E-39 T 15-10-2018 VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 SUPERFAMILY SSF53633 4 293 1.96E-70 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 443 1.1E-205 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 SUPERFAMILY SSF55729 299 429 1.1E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 Pfam PF00696 Amino acid kinase family 25 269 1.8E-29 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 Gene3D G3DSA:3.40.1160.10 7 295 5.4E-88 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 415 5.1E-8 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 PIRSF PIRSF000423 1 444 2.1E-202 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VIBNI_A0548 930819202c9c2b9829f8afb9e3d9c4c0 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 444 221.946 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.428 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 SUPERFAMILY SSF51569 1 291 1.03E-99 T 15-10-2018 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 SUPERFAMILY SSF110921 393 498 5.36E-21 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Gene3D G3DSA:3.20.20.70 1 277 2.6E-107 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 7.0E-31 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Gene3D G3DSA:1.10.238.260 280 393 8.2E-31 T 15-10-2018 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Pfam PF00682 HMGL-like 4 273 1.1E-100 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 4.3E-236 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 Gene3D G3DSA:3.30.160.270 394 500 9.6E-8 T 15-10-2018 VIBNI_A2908 6fd5f9f9a26b3f13a3562b4c6c0db50d 517 SMART SM00917 369 499 5.5E-29 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VIBNI_B0846 16b22b556ab2a1e9ef909720306a6e25 522 Gene3D G3DSA:3.40.720.10 3 411 2.9E-73 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_B0846 16b22b556ab2a1e9ef909720306a6e25 522 Pfam PF00884 Sulfatase 4 352 7.3E-42 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_B0846 16b22b556ab2a1e9ef909720306a6e25 522 SUPERFAMILY SSF53649 4 492 6.02E-76 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A3601 7c7911ff5640ea43fb205612c8de4796 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.8E-59 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VIBNI_A3601 7c7911ff5640ea43fb205612c8de4796 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.062 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VIBNI_A3601 7c7911ff5640ea43fb205612c8de4796 106 Gene3D G3DSA:1.10.140.10 2 105 3.3E-56 T 15-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VIBNI_A3601 7c7911ff5640ea43fb205612c8de4796 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 6.0E-49 T 15-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VIBNI_A3601 7c7911ff5640ea43fb205612c8de4796 106 SUPERFAMILY SSF47598 3 103 6.23E-57 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 8.9E-132 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.553 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 SUPERFAMILY SSF53697 12 256 6.9E-72 T 15-10-2018 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 Gene3D G3DSA:1.10.8.1080 226 304 3.6E-30 T 15-10-2018 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 Gene3D G3DSA:3.40.50.10490 8 225 7.2E-80 T 15-10-2018 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 Pfam PF13580 SIS domain 47 172 3.5E-10 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A0369 ad91d2c84ab11a7566c5852cb3e8e5d7 306 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 15-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VIBNI_B0992 d3627940c1667aac6b208d72641ee1f1 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 6 284 1.3E-92 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_B0992 d3627940c1667aac6b208d72641ee1f1 285 PIRSF PIRSF001359 3 285 4.2E-98 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_B0992 d3627940c1667aac6b208d72641ee1f1 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 284 2.4E-92 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_B0992 d3627940c1667aac6b208d72641ee1f1 285 SUPERFAMILY SSF51569 4 284 8.94E-93 T 15-10-2018 VIBNI_B0992 d3627940c1667aac6b208d72641ee1f1 285 Gene3D G3DSA:3.20.20.70 3 285 4.5E-98 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 364 2.8E-138 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 Gene3D G3DSA:3.90.1150.10 257 365 1.9E-39 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 Gene3D G3DSA:3.40.640.10 17 256 1.3E-83 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 PIRSF PIRSF000525 1 365 2.6E-135 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 364 45.822 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 SUPERFAMILY SSF53383 1 360 7.14E-102 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A0861 65e383d5635c750003ae532afe8e68f5 380 Pfam PF00266 Aminotransferase class-V 4 353 9.7E-47 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.10.560.10 532 627 2.9E-14 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.10.560.10 363 454 1.1E-9 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.10.560.10 197 281 9.2E-20 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.10.560.10 282 362 1.6E-9 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.10.560.10 768 846 1.4E-11 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF06251 Capsule biosynthesis GfcC 649 851 4.8E-14 T 15-10-2018 IPR010425 Domain of unknown function DUF1017 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Gene3D G3DSA:3.30.1950.10 127 196 3.3E-5 T 15-10-2018 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF10531 SLBB domain 202 251 1.9E-7 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF10531 SLBB domain 286 335 4.9E-8 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF10531 SLBB domain 371 396 0.0042 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF10531 SLBB domain 545 592 2.7E-11 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3676 b7ec22d583c02b60ebf91b9fccfe976d 876 Pfam PF02563 Polysaccharide biosynthesis/export protein 125 194 6.5E-11 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VIBNI_B1287 ef0ad0ffc782b26d5bf71d6410baad4b 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 7.4E-25 T 15-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VIBNI_B0453 52861f31f9eca3c9b40b26ffb5760d10 497 Gene3D G3DSA:3.40.309.10 263 455 2.0E-166 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B0453 52861f31f9eca3c9b40b26ffb5760d10 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B0453 52861f31f9eca3c9b40b26ffb5760d10 497 Gene3D G3DSA:3.40.605.10 17 483 2.0E-166 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0453 52861f31f9eca3c9b40b26ffb5760d10 497 SUPERFAMILY SSF53720 9 487 1.44E-156 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0453 52861f31f9eca3c9b40b26ffb5760d10 497 Pfam PF00171 Aldehyde dehydrogenase family 21 485 4.8E-162 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0197 2c0eafc72507b6e2be8d1ecb52e77095 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A0197 2c0eafc72507b6e2be8d1ecb52e77095 208 Gene3D G3DSA:3.90.79.10 1 208 9.9E-63 T 15-10-2018 VIBNI_A0197 2c0eafc72507b6e2be8d1ecb52e77095 208 SUPERFAMILY SSF55811 4 204 4.87E-45 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A0197 2c0eafc72507b6e2be8d1ecb52e77095 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 2.3E-60 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VIBNI_A0197 2c0eafc72507b6e2be8d1ecb52e77095 208 Pfam PF00293 NUDIX domain 59 175 2.3E-9 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A1852 709a91f76aa90c7aa1a78a4eb849245b 384 Gene3D G3DSA:3.40.1710.10 39 117 3.3E-5 T 15-10-2018 VIBNI_A1852 709a91f76aa90c7aa1a78a4eb849245b 384 Pfam PF12698 ABC-2 family transporter protein 21 368 2.9E-39 T 15-10-2018 VIBNI_A2155 46721815daf9d420bc9a3cb4a9777b77 267 Gene3D G3DSA:3.40.50.300 1 252 8.8E-53 T 15-10-2018 VIBNI_A2155 46721815daf9d420bc9a3cb4a9777b77 267 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2155 46721815daf9d420bc9a3cb4a9777b77 267 SMART SM00382 30 223 1.4E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2155 46721815daf9d420bc9a3cb4a9777b77 267 Pfam PF00005 ABC transporter 21 175 3.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2155 46721815daf9d420bc9a3cb4a9777b77 267 SUPERFAMILY SSF52540 4 233 2.47E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Gene3D G3DSA:1.20.1330.10 188 329 4.5E-14 T 15-10-2018 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Gene3D G3DSA:1.20.58.1830 5 33 5.4E-73 T 15-10-2018 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 SUPERFAMILY SSF64518 1 376 3.66E-98 T 15-10-2018 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Pfam PF07196 Flagellin hook IN motif 194 249 8.0E-10 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 PRINTS PR00207 Flagellin signature 76 95 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 PRINTS PR00207 Flagellin signature 37 54 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 PRINTS PR00207 Flagellin signature 111 134 5.9E-27 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-42 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Gene3D G3DSA:1.20.1330.10 45 170 5.4E-73 T 15-10-2018 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 4.6E-26 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0707 4507072294c10ba7ce1e263a84c17d98 377 Gene3D G3DSA:1.10.8.410 330 376 6.8E-20 T 15-10-2018 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 8.2E-14 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 Gene3D G3DSA:3.40.50.12780 34 494 2.7E-103 T 15-10-2018 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 SUPERFAMILY SSF56801 4 622 6.54E-153 T 15-10-2018 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 Pfam PF00501 AMP-binding enzyme 65 501 5.9E-86 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 Gene3D G3DSA:3.30.300.30 497 626 1.5E-25 T 15-10-2018 VIBNI_A1829 9e30e0ea1bc56f23b30c2ad6cb31a18a 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 3.4E-26 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PIRSF PIRSF002764 1 222 3.9E-82 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 Pfam PF03379 CcmB protein 5 219 1.1E-89 T 15-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.9E-70 T 15-10-2018 VIBNI_A0752 a1afcb6e90e944fca5b7dbc9c26500f3 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.3E-91 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VIBNI_A3264 b71e8102e67f41387bb5c2b22f9d966a 82 SUPERFAMILY SSF143120 12 68 1.11E-7 T 15-10-2018 IPR036165 YefM-like superfamily VIBNI_A3264 b71e8102e67f41387bb5c2b22f9d966a 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 7.3E-8 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 SUPERFAMILY SSF52540 3 240 5.77E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 Gene3D G3DSA:2.40.50.100 239 347 3.7E-10 T 15-10-2018 VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 SUPERFAMILY SSF50331 236 353 1.05E-20 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 Gene3D G3DSA:2.40.50.140 277 339 3.7E-10 T 15-10-2018 VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 SMART SM00382 27 213 1.5E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 Gene3D G3DSA:3.40.50.300 1 236 1.3E-56 T 15-10-2018 VIBNI_B1714 f9dd17de9cba650b4cba917a8364e68b 362 Pfam PF00005 ABC transporter 19 160 2.3E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1593 b0a1e7199094a0f3e49e9e960a8e47e0 118 Pfam PF13671 AAA domain 6 104 3.1E-13 T 15-10-2018 VIBNI_A1593 b0a1e7199094a0f3e49e9e960a8e47e0 118 Gene3D G3DSA:3.40.50.300 4 113 7.2E-23 T 15-10-2018 VIBNI_A1593 b0a1e7199094a0f3e49e9e960a8e47e0 118 SUPERFAMILY SSF52540 3 102 7.33E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 Pfam PF12729 Four helix bundle sensory module for signal transduction 14 192 6.9E-14 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 479 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 498 2.9E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 499 5.7E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 Gene3D G3DSA:3.30.565.10 351 501 2.4E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 Gene3D G3DSA:1.10.287.130 243 343 2.1E-17 T 15-10-2018 VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 SMART SM00387 389 501 2.7E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A3081 148aa57d1f8f3a995fd2f7271f3bf72e 508 SUPERFAMILY SSF55874 342 498 3.67E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 69 513 6.2E-138 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 292 346 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 Gene3D G3DSA:1.20.210.10 45 578 1.0E-190 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 15 659 0.0 T 15-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 SUPERFAMILY SSF81442 56 572 1.26E-177 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 210 228 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 290 311 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 60 85 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 109 132 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 381 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 336 351 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 160 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 423 442 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 190 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 239 258 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 395 413 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1009 6e33eabcb50d9ed4aa8dc47f30821c01 693 PRINTS PR01165 Cytochrome c oxidase subunit I signature 473 494 4.7E-94 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 SUPERFAMILY SSF53706 42 660 9.03E-169 T 15-10-2018 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.1E-24 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Gene3D G3DSA:3.40.228.10 179 641 3.8E-243 T 15-10-2018 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Gene3D G3DSA:3.90.55.10 82 615 3.8E-243 T 15-10-2018 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Gene3D G3DSA:3.40.50.740 87 569 3.8E-243 T 15-10-2018 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 2.2E-78 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 SUPERFAMILY SSF50692 669 817 1.51E-42 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 15-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VIBNI_A1330 029608252f3851a11dcc80ce724feb69 820 Gene3D G3DSA:2.40.40.20 649 813 7.7E-49 T 15-10-2018 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 225 2.9E-48 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 Gene3D G3DSA:3.10.290.10 6 69 1.8E-21 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 SUPERFAMILY SSF55120 67 228 2.64E-38 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 Pfam PF01479 S4 domain 9 39 1.1E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 SUPERFAMILY SSF55174 9 62 3.2E-13 T 15-10-2018 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 Pfam PF00849 RNA pseudouridylate synthase 68 194 4.8E-14 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 Gene3D G3DSA:3.30.70.580 70 228 3.4E-54 T 15-10-2018 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 Gene3D G3DSA:3.30.70.1560 133 206 3.4E-54 T 15-10-2018 VIBNI_A2663 8c8518e5978962c189b94fc9ead324c5 338 SMART SM00363 8 65 3.6E-7 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_B0891 8ff07d14fcfe59cc69ee7a768a3bfc63 180 Gene3D G3DSA:3.10.640.10 1 179 1.6E-69 T 15-10-2018 IPR038590 YaeQ superfamily VIBNI_B0891 8ff07d14fcfe59cc69ee7a768a3bfc63 180 Pfam PF07152 YaeQ protein 2 172 7.7E-70 T 15-10-2018 IPR009822 YaeQ VIBNI_B0891 8ff07d14fcfe59cc69ee7a768a3bfc63 180 SMART SM01322 2 174 2.5E-103 T 15-10-2018 IPR009822 YaeQ VIBNI_B0891 8ff07d14fcfe59cc69ee7a768a3bfc63 180 SUPERFAMILY SSF52980 2 177 5.9E-68 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_B0891 8ff07d14fcfe59cc69ee7a768a3bfc63 180 PIRSF PIRSF011484 1 178 2.2E-68 T 15-10-2018 IPR009822 YaeQ VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:3.30.300.30 864 940 1.6E-9 T 15-10-2018 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:1.10.1200.10 941 1028 2.8E-21 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:3.40.50.1820 1031 1295 2.7E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:3.40.50.12780 19 429 8.9E-108 T 15-10-2018 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Pfam PF00975 Thioesterase domain 1041 1211 1.1E-23 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 SUPERFAMILY SSF53474 1027 1289 1.36E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Pfam PF00550 Phosphopantetheine attachment site 955 1018 3.7E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Pfam PF00501 AMP-binding enzyme 32 436 3.9E-82 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 52 460 9.0E-107 T 15-10-2018 IPR010071 Amino acid adenylation domain VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:3.40.109.10 545 695 8.1E-14 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 SUPERFAMILY SSF47336 948 1019 4.32E-17 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 SUPERFAMILY SSF56801 24 964 6.28E-123 T 15-10-2018 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 ProSitePatterns PS00012 Phosphopantetheine attachment site. 977 992 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 Gene3D G3DSA:3.30.300.30 430 526 2.8E-12 T 15-10-2018 VIBNI_B0265 82c890ba36701fbd0aac7dd21bb1a282 1300 SMART SM00823 Phosphopantetheine attachment site 945 1022 0.0012 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 Gene3D G3DSA:3.40.50.2300 1 139 2.3E-35 T 15-10-2018 VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 1.2E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 313 3.9E-49 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 SUPERFAMILY SSF52172 7 157 1.07E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 SUPERFAMILY SSF55073 156 314 2.25E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 SMART SM00267 140 316 1.2E-58 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 Pfam PF00072 Response regulator receiver domain 10 116 1.9E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 SMART SM00448 8 120 1.1E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1154 9cb9bf92be52a0ff69280f66e6a4a804 316 Gene3D G3DSA:3.30.70.270 140 315 2.5E-53 T 15-10-2018 VIBNI_A0791 15401ade9ffabd0a4122fe01ddb34a10 259 SUPERFAMILY SSF52540 3 229 1.07E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0791 15401ade9ffabd0a4122fe01ddb34a10 259 SMART SM00382 28 223 1.3E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0791 15401ade9ffabd0a4122fe01ddb34a10 259 Pfam PF00005 ABC transporter 19 175 6.0E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0791 15401ade9ffabd0a4122fe01ddb34a10 259 Gene3D G3DSA:3.40.50.300 1 244 2.4E-61 T 15-10-2018 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 SUPERFAMILY SSF56542 19 386 6.28E-61 T 15-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 24 397 1.8E-107 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 Gene3D G3DSA:3.90.1200.10 639 779 2.7E-5 T 15-10-2018 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 221 246 3.1E-33 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 176 194 3.1E-33 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 87 107 3.1E-33 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 56 77 3.1E-33 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 322 343 3.1E-33 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 334 341 - T 15-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 SUPERFAMILY SSF55035 121 240 3.92E-30 T 15-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 Gene3D G3DSA:3.90.770.10 67 383 1.6E-112 T 15-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 Gene3D G3DSA:3.30.70.420 121 240 1.6E-112 T 15-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 SUPERFAMILY SSF56112 512 731 5.27E-16 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A3467 c1a2425e920fa11db49057adaffa024c 803 Pfam PF02958 Ecdysteroid kinase 530 733 4.5E-10 T 15-10-2018 IPR004119 Protein of unknown function DUF227 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 SUPERFAMILY SSF56672 3 239 1.78E-91 T 15-10-2018 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Gene3D G3DSA:1.10.150.20 175 233 9.8E-15 T 15-10-2018 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Gene3D G3DSA:3.30.70.270 75 174 1.9E-34 T 15-10-2018 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Gene3D G3DSA:3.30.1490.100 242 354 1.8E-25 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Pfam PF00817 impB/mucB/samB family 12 159 7.1E-49 T 15-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 342 1.4E-4 T 15-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 SUPERFAMILY SSF100879 246 354 4.12E-23 T 15-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Hamap MF_01113 DNA polymerase IV [dinB]. 6 354 36.641 T 15-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VIBNI_A0584 997018eec3aa7f0b363fa66e08918219 355 Gene3D G3DSA:2.30.40.20 16 74 4.2E-28 T 15-10-2018 VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 Gene3D G3DSA:2.150.10.10 413 477 7.3E-9 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 462 480 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 SUPERFAMILY SSF51120 437 565 2.62E-21 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 PRINTS PR00313 NodO calcium binding signature 493 501 8.0E-7 T 15-10-2018 VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 PRINTS PR00313 NodO calcium binding signature 509 518 8.0E-7 T 15-10-2018 VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 PRINTS PR00313 NodO calcium binding signature 475 483 8.0E-7 T 15-10-2018 VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 PRINTS PR00313 NodO calcium binding signature 454 465 8.0E-7 T 15-10-2018 VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 SUPERFAMILY SSF51445 34 402 4.88E-27 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 Gene3D G3DSA:2.150.10.10 478 606 5.8E-7 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VIBNI_A0501 8756d04299387887f7ae413c19d98b83 774 Gene3D G3DSA:3.20.20.80 27 401 5.8E-29 T 15-10-2018 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.685 T 15-10-2018 IPR022946 Uncharacterised protein family UPF0313 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 Pfam PF04055 Radical SAM superfamily 371 576 1.1E-21 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 SUPERFAMILY SSF102114 370 605 2.09E-11 T 15-10-2018 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 Pfam PF08497 Radical SAM N-terminal 24 370 1.8E-141 T 15-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 2.6E-261 T 15-10-2018 IPR022946 Uncharacterised protein family UPF0313 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 Pfam PF11842 Domain of unknown function (DUF3362) 585 731 6.8E-44 T 15-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 SMART SM00729 367 617 3.1E-6 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A2232 491cc26cf37f3783d8e90421994ac581 741 Gene3D G3DSA:3.80.30.20 366 628 2.2E-13 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A1391 5e764d2c9bfdbe6d0246aaa0e2c8a330 160 SUPERFAMILY SSF55068 2 150 2.09E-47 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A1391 5e764d2c9bfdbe6d0246aaa0e2c8a330 160 Gene3D G3DSA:3.30.1060.10 3 159 9.2E-41 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A1391 5e764d2c9bfdbe6d0246aaa0e2c8a330 160 Pfam PF01625 Peptide methionine sulfoxide reductase 6 149 1.7E-42 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A1391 5e764d2c9bfdbe6d0246aaa0e2c8a330 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 154 25.359 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A1391 5e764d2c9bfdbe6d0246aaa0e2c8a330 160 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 148 7.6E-32 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B0461 882195bbf11992eba7bc6becc928f25a 331 Gene3D G3DSA:1.10.10.60 225 331 6.7E-21 T 15-10-2018 VIBNI_B0461 882195bbf11992eba7bc6becc928f25a 331 Pfam PF12833 Helix-turn-helix domain 251 328 9.5E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0461 882195bbf11992eba7bc6becc928f25a 331 SUPERFAMILY SSF46689 280 330 2.11E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0461 882195bbf11992eba7bc6becc928f25a 331 SMART SM00342 245 327 9.0E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0461 882195bbf11992eba7bc6becc928f25a 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 196 7.0E-28 T 15-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VIBNI_B0754 bad473977800577e2b11164cf5d436fd 361 Pfam PF13407 Periplasmic binding protein domain 65 320 7.3E-28 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0754 bad473977800577e2b11164cf5d436fd 361 Gene3D G3DSA:3.40.50.2300 167 354 5.3E-118 T 15-10-2018 VIBNI_B0754 bad473977800577e2b11164cf5d436fd 361 Gene3D G3DSA:3.40.50.2300 64 330 5.3E-118 T 15-10-2018 VIBNI_B0754 bad473977800577e2b11164cf5d436fd 361 SUPERFAMILY SSF53822 60 333 1.37E-45 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1285 d97fdcff841bcdf1f958a0c6ec53d982 319 SUPERFAMILY SSF103481 41 136 2.22E-12 T 15-10-2018 VIBNI_B1285 d97fdcff841bcdf1f958a0c6ec53d982 319 Pfam PF00892 EamA-like transporter family 152 287 6.3E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1285 d97fdcff841bcdf1f958a0c6ec53d982 319 Pfam PF00892 EamA-like transporter family 5 135 5.7E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1285 d97fdcff841bcdf1f958a0c6ec53d982 319 SUPERFAMILY SSF103481 181 292 7.72E-10 T 15-10-2018 VIBNI_B1805 69d8942734430e4cf2e3f9d6d468cfc8 443 Gene3D G3DSA:1.20.1250.20 16 435 3.2E-17 T 15-10-2018 VIBNI_B1805 69d8942734430e4cf2e3f9d6d468cfc8 443 SUPERFAMILY SSF103473 20 432 1.83E-23 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1805 69d8942734430e4cf2e3f9d6d468cfc8 443 Pfam PF07690 Major Facilitator Superfamily 22 382 1.2E-8 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 Gene3D G3DSA:3.20.20.150 1 392 8.4E-143 T 15-10-2018 VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 PIRSF PIRSF016049 1 393 4.3E-174 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.3E-149 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 SUPERFAMILY SSF51658 1 383 3.37E-79 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 1.0E-192 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_A1198 1639aa2bbd9642fca1619d9d8bc8be2f 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 202.358 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 Gene3D G3DSA:1.10.286.10 1 84 6.8E-37 T 15-10-2018 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 SUPERFAMILY SSF55620 8 216 4.45E-74 T 15-10-2018 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 Gene3D G3DSA:3.30.1130.10 85 217 5.0E-51 T 15-10-2018 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 Pfam PF01227 GTP cyclohydrolase I 38 215 2.4E-63 T 15-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.288 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VIBNI_B1027 d9c0e0bdb662f7091ea20e38275b6b83 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 9.0E-80 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 PIRSF PIRSF000728 1 262 4.0E-67 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 8 234 1.2E-61 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 Hamap MF_00082 Acetylglutamate kinase [argB]. 5 254 41.902 T 15-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 Gene3D G3DSA:3.40.1160.10 3 259 5.3E-64 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 SUPERFAMILY SSF53633 8 260 3.4E-59 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A3593 0ecc423359b72cff2ec20123a8c8a5aa 262 Pfam PF00696 Amino acid kinase family 8 238 2.7E-33 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 Gene3D G3DSA:1.10.260.40 1 57 2.3E-14 T 15-10-2018 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 SUPERFAMILY SSF47413 2 50 2.81E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 Gene3D G3DSA:3.40.50.2300 61 304 2.4E-60 T 15-10-2018 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 59 319 2.5E-29 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 15-10-2018 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 SMART SM00354 1 70 5.5E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 Gene3D G3DSA:3.40.50.2300 158 288 2.4E-60 T 15-10-2018 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 46 3.3E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0576 f9cf307c92b283aeaa41f09e0fd52571 332 SUPERFAMILY SSF53822 59 305 1.85E-53 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0388 0de7c9d48520cf74015b55cc6cbf5d5e 182 Pfam PF00857 Isochorismatase family 4 151 1.1E-40 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 VIBNI_B0388 0de7c9d48520cf74015b55cc6cbf5d5e 182 Gene3D G3DSA:3.40.50.850 1 182 1.5E-52 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_B0388 0de7c9d48520cf74015b55cc6cbf5d5e 182 SUPERFAMILY SSF52499 2 182 7.59E-53 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 PIRSF PIRSF005261 1 284 1.8E-71 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 Gene3D G3DSA:3.90.1280.10 225 284 2.5E-20 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 SUPERFAMILY SSF118352 223 281 6.67E-18 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.006 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 SUPERFAMILY SSF64397 4 231 4.58E-76 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 Gene3D G3DSA:3.55.30.10 1 175 5.8E-64 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 Pfam PF01430 Hsp33 protein 6 272 3.6E-81 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VIBNI_A3382 842e69f7ac35112747b462a96719e015 291 Gene3D G3DSA:1.10.287.480 178 224 7.5E-24 T 15-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 3.3E-75 T 15-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 Pfam PF01311 Bacterial export proteins, family 1 14 242 2.4E-57 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.1E-16 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.1E-16 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.1E-16 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VIBNI_A0735 1c50076f7e092e3b214f1e4a2cc22c1a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.1E-16 T 15-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Pfam PF13437 HlyD family secretion protein 182 289 6.4E-8 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Gene3D G3DSA:2.40.30.170 59 305 3.2E-51 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Pfam PF13533 Biotin-lipoyl like 70 119 1.7E-6 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Gene3D G3DSA:1.10.287.470 105 179 3.2E-51 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Gene3D G3DSA:2.40.420.20 306 370 3.2E-51 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 SUPERFAMILY SSF111369 60 280 1.1E-21 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 Gene3D G3DSA:2.40.50.100 68 213 3.2E-51 T 15-10-2018 VIBNI_B1352 baac4bd6098aec017b6e2ce942490068 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 372 6.4E-40 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Gene3D G3DSA:3.90.640.10 238 311 2.9E-115 T 15-10-2018 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Pfam PF00012 Hsp70 protein 22 601 1.7E-191 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 SUPERFAMILY SSF53067 200 377 1.16E-50 T 15-10-2018 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.0E-53 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Gene3D G3DSA:2.60.34.10 389 519 2.2E-48 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 SUPERFAMILY SSF100934 504 616 1.16E-33 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Gene3D G3DSA:3.30.420.40 194 361 2.9E-115 T 15-10-2018 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.378 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Gene3D G3DSA:1.20.1270.10 520 616 1.9E-25 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 3.7E-266 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 Gene3D G3DSA:3.30.420.40 23 374 2.9E-115 T 15-10-2018 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 SUPERFAMILY SSF100920 384 537 1.96E-50 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A2783 5facf292f82a153f18aa6ed24d96d369 617 SUPERFAMILY SSF53067 19 196 8.29E-52 T 15-10-2018 VIBNI_A0344 f6dc3baeef2b73d26f5cc26ca7abca5e 908 SUPERFAMILY SSF52540 15 411 1.77E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0344 f6dc3baeef2b73d26f5cc26ca7abca5e 908 Pfam PF04851 Type III restriction enzyme, res subunit 133 325 1.2E-8 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A0344 f6dc3baeef2b73d26f5cc26ca7abca5e 908 Gene3D G3DSA:3.40.50.300 385 586 3.3E-5 T 15-10-2018 VIBNI_B1963 f6dc3baeef2b73d26f5cc26ca7abca5e 908 SUPERFAMILY SSF52540 15 411 1.77E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1963 f6dc3baeef2b73d26f5cc26ca7abca5e 908 Pfam PF04851 Type III restriction enzyme, res subunit 133 325 1.2E-8 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_B1963 f6dc3baeef2b73d26f5cc26ca7abca5e 908 Gene3D G3DSA:3.40.50.300 385 586 3.3E-5 T 15-10-2018 VIBNI_A3110 7000673a3cb4b426e81fa6a9ed623ebb 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 3.1E-68 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A3110 7000673a3cb4b426e81fa6a9ed623ebb 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.091 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A3110 7000673a3cb4b426e81fa6a9ed623ebb 210 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 1.4E-67 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A3110 7000673a3cb4b426e81fa6a9ed623ebb 210 SUPERFAMILY SSF55068 3 207 1.83E-79 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A3110 7000673a3cb4b426e81fa6a9ed623ebb 210 Gene3D G3DSA:3.30.1060.10 3 210 1.3E-90 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.72 T 15-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Gene3D G3DSA:3.40.50.620 13 389 2.1E-162 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 SUPERFAMILY SSF57770 147 181 1.12E-12 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Pfam PF09334 tRNA synthetases class I (M) 13 401 8.7E-166 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Gene3D G3DSA:2.20.28.20 147 181 2.1E-162 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 SUPERFAMILY SSF52374 11 392 3.43E-101 T 15-10-2018 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Gene3D G3DSA:2.40.50.140 580 691 6.2E-34 T 15-10-2018 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Pfam PF01588 Putative tRNA binding domain 596 688 4.8E-25 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 SUPERFAMILY SSF50249 586 690 2.94E-31 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 SUPERFAMILY SSF47323 394 552 2.06E-45 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 690 5.5E-46 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 540 1.1E-201 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 Gene3D G3DSA:1.10.730.10 394 531 5.1E-34 T 15-10-2018 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 7.2E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VIBNI_A2388 ee0ef23c7136d333c9dcb68b36276c58 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 Gene3D G3DSA:3.40.190.10 175 269 2.0E-39 T 15-10-2018 VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 SUPERFAMILY SSF53850 98 296 2.48E-25 T 15-10-2018 VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 Gene3D G3DSA:1.10.10.10 2 90 4.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 3.0E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 SUPERFAMILY SSF46785 9 86 1.13E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 Pfam PF03466 LysR substrate binding domain 98 295 4.6E-10 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1475 333c246dc7a07640efaa45579026577e 302 Gene3D G3DSA:3.40.190.10 92 294 2.0E-39 T 15-10-2018 VIBNI_A2926 78f566a035eb5fa5b7e037c25f6bae67 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.539 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2926 78f566a035eb5fa5b7e037c25f6bae67 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-40 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2926 78f566a035eb5fa5b7e037c25f6bae67 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 15-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2926 78f566a035eb5fa5b7e037c25f6bae67 103 SUPERFAMILY SSF141091 1 102 4.71E-39 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2926 78f566a035eb5fa5b7e037c25f6bae67 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.8E-44 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_B0049 bf88d70056c63e7ae9f24832e5ea8bc3 296 Gene3D G3DSA:1.10.10.800 141 226 3.1E-82 T 15-10-2018 VIBNI_B0049 bf88d70056c63e7ae9f24832e5ea8bc3 296 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 14 144 1.3E-6 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VIBNI_B0049 bf88d70056c63e7ae9f24832e5ea8bc3 296 SUPERFAMILY SSF53474 4 295 2.92E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0049 bf88d70056c63e7ae9f24832e5ea8bc3 296 Gene3D G3DSA:3.40.50.1820 13 280 3.1E-82 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2958 402223fe568d4374891bef42e904ffa0 266 SUPERFAMILY SSF52540 6 240 1.08E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2958 402223fe568d4374891bef42e904ffa0 266 SMART SM00382 31 228 7.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2958 402223fe568d4374891bef42e904ffa0 266 Gene3D G3DSA:3.40.50.300 4 260 1.7E-66 T 15-10-2018 VIBNI_A2958 402223fe568d4374891bef42e904ffa0 266 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2958 402223fe568d4374891bef42e904ffa0 266 Pfam PF00005 ABC transporter 23 170 3.3E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.5E-93 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 Gene3D G3DSA:2.40.30.10 131 209 6.9E-20 T 15-10-2018 VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 Pfam PF00297 Ribosomal protein L3 94 182 1.0E-15 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 SUPERFAMILY SSF50447 1 208 7.06E-83 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.775 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3178 031eed29691b6e96ed1ec7b9332b39ed 209 Gene3D G3DSA:2.40.50.620 33 96 8.4E-14 T 15-10-2018 VIBNI_A3422 665d5d7677a56c9637032348e8acdb29 133 Pfam PF00293 NUDIX domain 12 112 3.8E-12 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A3422 665d5d7677a56c9637032348e8acdb29 133 SUPERFAMILY SSF55811 9 113 1.49E-19 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A3422 665d5d7677a56c9637032348e8acdb29 133 Gene3D G3DSA:3.90.79.10 5 126 4.0E-20 T 15-10-2018 VIBNI_B2112 e6c0221a68c6388800fa17995bbc07a3 178 Gene3D G3DSA:3.40.630.30 2 176 8.3E-46 T 15-10-2018 VIBNI_B2112 e6c0221a68c6388800fa17995bbc07a3 178 SUPERFAMILY SSF55729 7 175 2.05E-42 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B2112 e6c0221a68c6388800fa17995bbc07a3 178 Pfam PF13302 Acetyltransferase (GNAT) domain 34 150 5.0E-19 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 Pfam PF12833 Helix-turn-helix domain 234 313 7.7E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 Gene3D G3DSA:1.10.10.60 210 315 4.6E-27 T 15-10-2018 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 SUPERFAMILY SSF46689 211 262 1.7E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 Gene3D G3DSA:3.40.50.880 1 209 1.1E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 SMART SM00342 228 311 2.6E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 Pfam PF01965 DJ-1/PfpI family 2 173 3.8E-24 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 SUPERFAMILY SSF52317 1 193 1.04E-48 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1001 faf6350e2c250c6f0c16a247d8272efd 321 SUPERFAMILY SSF46689 265 315 1.52E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 SUPERFAMILY SSF56796 9 366 1.44E-77 T 15-10-2018 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 356 2.3E-60 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 Gene3D G3DSA:3.40.50.1970 8 164 6.5E-34 T 15-10-2018 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 PIRSF PIRSF000112 3 371 1.6E-82 T 15-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 Gene3D G3DSA:1.20.1090.10 166 373 1.3E-71 T 15-10-2018 VIBNI_B1799 a38bf1a23e0fb6ccc4dfa42ab74ef742 373 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 156 184 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A3291 36f7889c5a8e97dd40fd29dfdc87b5d6 191 Gene3D G3DSA:2.40.160.20 18 191 1.1E-13 T 15-10-2018 VIBNI_A3291 36f7889c5a8e97dd40fd29dfdc87b5d6 191 Pfam PF13505 Outer membrane protein beta-barrel domain 8 191 4.1E-12 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A3291 36f7889c5a8e97dd40fd29dfdc87b5d6 191 SUPERFAMILY SSF56925 20 191 1.36E-14 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B0871 017c16ab4dffcb5e0263f8641d8324a9 369 SUPERFAMILY SSF53850 40 351 8.86E-45 T 15-10-2018 VIBNI_B0871 017c16ab4dffcb5e0263f8641d8324a9 369 Gene3D G3DSA:3.40.190.10 44 181 6.7E-14 T 15-10-2018 VIBNI_B0871 017c16ab4dffcb5e0263f8641d8324a9 369 Pfam PF13416 Bacterial extracellular solute-binding protein 59 337 3.9E-28 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0871 017c16ab4dffcb5e0263f8641d8324a9 369 Gene3D G3DSA:3.40.190.10 191 365 1.1E-11 T 15-10-2018 VIBNI_A0228 a33d470a09c52c793a49637f24f65c2e 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 340 364 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0228 a33d470a09c52c793a49637f24f65c2e 400 Pfam PF01098 Cell cycle protein 27 383 1.5E-117 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0228 a33d470a09c52c793a49637f24f65c2e 400 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 23 391 41.095 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0228 a33d470a09c52c793a49637f24f65c2e 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 381 4.9E-132 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A1514 9336e653f92363966f734cc1957ee0c4 249 Pfam PF00005 ABC transporter 15 162 2.6E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1514 9336e653f92363966f734cc1957ee0c4 249 Gene3D G3DSA:3.40.50.300 9 248 4.1E-55 T 15-10-2018 VIBNI_A1514 9336e653f92363966f734cc1957ee0c4 249 SMART SM00382 22 211 1.6E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1514 9336e653f92363966f734cc1957ee0c4 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 249 41.845 T 15-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VIBNI_A1514 9336e653f92363966f734cc1957ee0c4 249 SUPERFAMILY SSF52540 15 227 1.66E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 Gene3D G3DSA:3.40.50.12740 4 206 2.4E-64 T 15-10-2018 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 SMART SM00421 145 202 2.3E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 SUPERFAMILY SSF46894 132 205 1.67E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 SMART SM00448 4 117 8.0E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 SUPERFAMILY SSF52172 4 134 7.68E-35 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.4E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1297 4dff8c6ffd49921f0351f493a2c18bf4 210 Pfam PF00072 Response regulator receiver domain 6 117 2.1E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1473 423c8f48269b87b2899f9f6167c0bcdd 92 Gene3D G3DSA:1.10.150.20 4 88 3.9E-13 T 15-10-2018 VIBNI_B1473 423c8f48269b87b2899f9f6167c0bcdd 92 Pfam PF04994 TfoX C-terminal domain 5 81 2.6E-13 T 15-10-2018 IPR007077 TfoX, C-terminal VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 Gene3D G3DSA:3.10.105.10 351 598 3.1E-40 T 15-10-2018 VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 535 2.2E-72 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 PIRSF PIRSF002741 271 622 3.7E-27 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 PIRSF PIRSF002741 68 226 3.9E-22 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 SUPERFAMILY SSF53850 80 623 1.34E-78 T 15-10-2018 VIBNI_B0705 9f9317b5478d65aa1f6f001cb345a48f 637 Gene3D G3DSA:3.40.190.10 66 339 1.4E-41 T 15-10-2018 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 SUPERFAMILY SSF82679 1 104 1.22E-28 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 46.621 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 Pfam PF02357 Transcription termination factor nusG 2 93 6.0E-19 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 SMART SM00738 1 101 1.7E-24 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 2.0E-62 T 15-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VIBNI_A2596 f6f7b7d5f6454331865cd588aa6d19dc 165 Gene3D G3DSA:3.30.70.940 1 164 3.7E-51 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 PIRSF PIRSF000538 1 504 5.8E-115 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 2.9E-55 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 Gene3D G3DSA:3.30.420.40 241 505 8.7E-73 T 15-10-2018 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 Gene3D G3DSA:3.30.420.40 1 240 6.7E-71 T 15-10-2018 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 284 450 1.6E-27 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 SUPERFAMILY SSF53067 250 498 3.54E-54 T 15-10-2018 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 SUPERFAMILY SSF53067 3 250 2.94E-53 T 15-10-2018 VIBNI_B2086 919021b91e8e545423111ace7e0f0621 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 7.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 7.3E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 SUPERFAMILY SSF46785 12 84 7.65E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 Pfam PF07729 FCD domain 109 228 2.8E-25 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 Gene3D G3DSA:1.10.10.10 11 84 8.3E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 SMART SM00895 108 230 1.4E-20 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 SMART SM00345 21 80 7.4E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 Gene3D G3DSA:1.20.120.530 104 241 2.3E-27 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 80 5.5E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2756 38c6374cb1a6fef728fc1b564ae08647 242 SUPERFAMILY SSF48008 106 236 1.23E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 Gene3D G3DSA:3.30.479.20 56 136 5.0E-26 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 SUPERFAMILY SSF46934 3 53 2.55E-18 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 Gene3D G3DSA:1.10.8.10 1 55 6.5E-26 T 15-10-2018 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 SUPERFAMILY SSF54713 55 137 2.83E-18 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 77.203 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 Gene3D G3DSA:1.10.286.20 184 223 2.4E-22 T 15-10-2018 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 Pfam PF00889 Elongation factor TS 70 260 4.7E-61 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 1.4E-103 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A2503 bf57c19cdd7f30e988bb60c5480404f9 280 SUPERFAMILY SSF54713 141 279 6.67E-46 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 367 9.0E-7 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Gene3D G3DSA:3.40.1190.10 100 304 2.0E-64 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 SUPERFAMILY SSF53623 102 302 4.45E-51 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 439 9.1E-126 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 11 441 31.627 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Pfam PF08245 Mur ligase middle domain 116 284 8.5E-26 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Gene3D G3DSA:3.90.190.20 305 438 7.1E-37 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 Gene3D G3DSA:3.40.50.720 8 99 2.4E-20 T 15-10-2018 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 SUPERFAMILY SSF53244 304 440 7.78E-40 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0227 4bcacc39223ed88441b14d3842dbed61 444 SUPERFAMILY SSF51984 12 100 6.93E-18 T 15-10-2018 VIBNI_B1716 06ca92e0602aceb4b7821d765a203835 287 SUPERFAMILY SSF161098 51 275 1.96E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1716 06ca92e0602aceb4b7821d765a203835 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 276 2.4E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1716 06ca92e0602aceb4b7821d765a203835 287 Gene3D G3DSA:1.10.3720.10 46 286 9.2E-50 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3464 39f9ade12d6f4c16976ee61641bee025 446 Pfam PF01554 MatE 17 175 1.4E-20 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3464 39f9ade12d6f4c16976ee61641bee025 446 Pfam PF01554 MatE 240 400 3.2E-9 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SUPERFAMILY SSF55073 284 444 1.18E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Gene3D G3DSA:3.20.20.450 456 711 8.1E-97 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Gene3D G3DSA:1.20.1480.50 182 275 2.2E-11 T 15-10-2018 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SMART SM00304 221 273 4.7E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SUPERFAMILY SSF158472 221 270 4.58E-7 T 15-10-2018 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Pfam PF00563 EAL domain 459 694 6.2E-75 T 15-10-2018 IPR001633 EAL domain VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Pfam PF00672 HAMP domain 221 269 7.5E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SMART SM00267 268 443 9.3E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Pfam PF00990 Diguanylate cyclase, GGDEF domain 279 438 3.4E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 442 2.7E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 Gene3D G3DSA:3.30.70.270 276 455 2.2E-55 T 15-10-2018 VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SMART SM00052 453 700 3.1E-117 T 15-10-2018 IPR001633 EAL domain VIBNI_A1576 6b345211bb0d35eb87e369a879f43c92 713 SUPERFAMILY SSF141868 458 707 5.49E-87 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 PIRSF PIRSF000161 1 268 6.4E-89 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 SUPERFAMILY SSF51735 1 268 1.58E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 Gene3D G3DSA:3.40.50.720 3 264 2.2E-101 T 15-10-2018 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.6E-99 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 SUPERFAMILY SSF55347 127 236 2.18E-37 T 15-10-2018 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.847 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 Gene3D G3DSA:3.30.360.10 127 234 2.2E-101 T 15-10-2018 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 3.3E-41 T 15-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 15-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A0238 b69431b1f158cb7aee10095a3cb99069 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.2E-44 T 15-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VIBNI_A1183 4cd10d5dfa8332e6c734c7dcfb45d74c 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 186 376 2.4E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1183 4cd10d5dfa8332e6c734c7dcfb45d74c 384 SUPERFAMILY SSF161098 11 383 4.06E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1183 4cd10d5dfa8332e6c734c7dcfb45d74c 384 Gene3D G3DSA:1.10.3720.10 135 370 4.3E-50 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 SMART SM00342 243 326 1.1E-30 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 Gene3D G3DSA:1.10.10.60 223 276 1.8E-13 T 15-10-2018 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 SUPERFAMILY SSF46689 229 277 9.86E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 5.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 5.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 Gene3D G3DSA:1.10.10.60 277 329 2.3E-14 T 15-10-2018 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 SUPERFAMILY SSF46689 279 324 2.82E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1159 0886cc8a102b378eea4d81c73b418c5f 332 Pfam PF12833 Helix-turn-helix domain 249 324 1.2E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2213 d14ad6c75feeefc1d20904e767d9cc65 123 Gene3D G3DSA:3.10.450.50 5 118 2.1E-12 T 15-10-2018 VIBNI_A2213 d14ad6c75feeefc1d20904e767d9cc65 123 SUPERFAMILY SSF54427 1 116 5.7E-18 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A3841 c9b814abf662483ed1260c35c9ffab79 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 8.2E-70 T 15-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VIBNI_A3841 c9b814abf662483ed1260c35c9ffab79 217 Pfam PF03006 Haemolysin-III related 9 207 1.5E-36 T 15-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VIBNI_B0693 367e02f641179e4668d0fbbc62df4e5d 433 SUPERFAMILY SSF53300 151 342 8.21E-11 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 74 5.0E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 SMART SM00895 99 224 1.9E-14 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 Gene3D G3DSA:1.20.120.530 80 233 1.2E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 Gene3D G3DSA:1.10.10.10 7 77 1.3E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 SUPERFAMILY SSF48008 97 231 2.75E-21 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 SMART SM00345 15 74 1.1E-4 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 Pfam PF07729 FCD domain 99 223 2.2E-17 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0659 6b7ff9ae15084f270d07a208dc0333ca 235 SUPERFAMILY SSF46785 9 78 1.19E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 PIRSF PIRSF000164 10 336 3.1E-105 T 15-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.2E-92 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 8.6E-149 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.799 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 SUPERFAMILY SSF51395 1 336 1.93E-106 T 15-10-2018 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 Gene3D G3DSA:3.20.20.70 2 336 1.0E-143 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1787 5e22dbe70ac073b017f167f5e27304f5 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 645 5.2E-44 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Pfam PF05227 CHASE3 domain 46 176 3.4E-14 T 15-10-2018 IPR007891 CHASE3 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Pfam PF05227 CHASE3 domain 188 312 1.3E-17 T 15-10-2018 IPR007891 CHASE3 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Gene3D G3DSA:1.10.287.950 359 681 1.9E-65 T 15-10-2018 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 SMART SM00283 419 680 2.1E-66 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Gene3D G3DSA:1.20.1440.210 48 176 4.3E-11 T 15-10-2018 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 Gene3D G3DSA:1.20.1440.210 182 315 1.4E-14 T 15-10-2018 VIBNI_A0944 fa999a2280eca641c57ad9d9aea17a40 681 SUPERFAMILY SSF58104 379 681 6.54E-66 T 15-10-2018 VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 SUPERFAMILY SSF52540 10 262 1.91E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 SMART SM00382 43 241 3.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 Gene3D G3DSA:3.40.50.300 8 330 9.4E-79 T 15-10-2018 VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 Pfam PF00005 ABC transporter 35 192 3.7E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.4E-23 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 2.5E-17 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2826 a4f3a0424014c7496260aa79ea1baf50 330 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1256 223c2bad6a1cfd0f12bb80b12d0c4547 187 Pfam PF07298 NnrU protein 3 185 4.7E-45 T 15-10-2018 IPR009915 NnrU domain VIBNI_A3441 200b1ada81fb2c62d19ea53bda13dc6a 563 SUPERFAMILY SSF52540 198 483 3.22E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3441 200b1ada81fb2c62d19ea53bda13dc6a 563 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 201 471 9.8E-12 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A3441 200b1ada81fb2c62d19ea53bda13dc6a 563 Gene3D G3DSA:3.40.50.300 170 491 4.6E-11 T 15-10-2018 VIBNI_A2019 200b1ada81fb2c62d19ea53bda13dc6a 563 SUPERFAMILY SSF52540 198 483 3.22E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2019 200b1ada81fb2c62d19ea53bda13dc6a 563 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 201 471 9.8E-12 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2019 200b1ada81fb2c62d19ea53bda13dc6a 563 Gene3D G3DSA:3.40.50.300 170 491 4.6E-11 T 15-10-2018 VIBNI_B0252 ecb32d51816c4e0edb91d62ad8ea1f2b 206 Pfam PF00775 Dioxygenase 37 178 5.1E-22 T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VIBNI_B0252 ecb32d51816c4e0edb91d62ad8ea1f2b 206 Gene3D G3DSA:2.60.130.10 24 206 3.3E-47 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VIBNI_B0252 ecb32d51816c4e0edb91d62ad8ea1f2b 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 72 100 - T 15-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VIBNI_B0252 ecb32d51816c4e0edb91d62ad8ea1f2b 206 SUPERFAMILY SSF49482 25 188 5.76E-47 T 15-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VIBNI_A1078 b52d6c3966386708354f464902844532 584 Gene3D G3DSA:1.20.1560.10 1 328 1.5E-81 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1078 b52d6c3966386708354f464902844532 584 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1078 b52d6c3966386708354f464902844532 584 Pfam PF00664 ABC transporter transmembrane region 27 294 2.6E-52 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A1078 b52d6c3966386708354f464902844532 584 SUPERFAMILY SSF52540 336 580 4.39E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1078 b52d6c3966386708354f464902844532 584 SMART SM00382 368 555 2.8E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1078 b52d6c3966386708354f464902844532 584 Pfam PF00005 ABC transporter 359 509 7.5E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1078 b52d6c3966386708354f464902844532 584 SUPERFAMILY SSF90123 14 327 1.31E-74 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1078 b52d6c3966386708354f464902844532 584 Gene3D G3DSA:3.40.50.300 329 581 2.8E-98 T 15-10-2018 VIBNI_A1078 b52d6c3966386708354f464902844532 584 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.1E-232 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 Gene3D G3DSA:3.30.1360.60 433 510 4.3E-25 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 SUPERFAMILY SSF55604 436 509 3.53E-20 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 Pfam PF02378 Phosphotransferase system, EIIC 11 352 4.9E-66 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 410 496 1.0E-22 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 Pfam PF00367 phosphotransferase system, EIIB 438 471 3.1E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 449 466 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A2580 9fcb147ca19630309f146c5823ff31b6 521 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 507 5.8E-194 T 15-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Pfam PF01464 Transglycosylase SLT domain 299 402 6.8E-21 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 472 49.103 T 15-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 269 5.4E-34 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 SUPERFAMILY SSF53955 247 452 1.61E-36 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Gene3D G3DSA:1.10.530.10 291 452 3.3E-34 T 15-10-2018 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 SMART SM00062 44 270 2.9E-37 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Gene3D G3DSA:3.40.190.10 129 226 2.3E-71 T 15-10-2018 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 311 339 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 SUPERFAMILY SSF53850 45 269 2.97E-42 T 15-10-2018 VIBNI_A0641 9377406e4c295847d5ee7811a16d493a 519 Gene3D G3DSA:3.40.190.10 38 265 2.3E-71 T 15-10-2018 VIBNI_A2393 6f8b6d57c825956e4947daa763c4f26f 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 6.8E-45 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VIBNI_A2393 6f8b6d57c825956e4947daa763c4f26f 173 Gene3D G3DSA:1.20.1550.10 3 173 3.7E-60 T 15-10-2018 IPR023380 DsbB-like superfamily VIBNI_A2393 6f8b6d57c825956e4947daa763c4f26f 173 SUPERFAMILY SSF158442 17 163 6.93E-46 T 15-10-2018 IPR023380 DsbB-like superfamily VIBNI_A2393 6f8b6d57c825956e4947daa763c4f26f 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.664 T 15-10-2018 IPR022920 Disulphide bond formation protein DsbB VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 SMART SM00876 220 312 4.2E-43 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 SMART SM00729 43 255 2.2E-40 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 1.9E-123 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 5.6E-20 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 SUPERFAMILY SSF102114 5 310 3.27E-88 T 15-10-2018 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.333 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 Pfam PF04055 Radical SAM superfamily 50 198 1.4E-14 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 PIRSF PIRSF001619 1 318 1.0E-136 T 15-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A2318 7d67a7d73783038f8f455068374cc752 350 Gene3D G3DSA:3.20.20.70 4 314 1.2E-130 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1004 96909b9922537f4ead409fef2144ad4e 168 Pfam PF04314 Copper chaperone PCu(A)C 53 156 1.7E-27 T 15-10-2018 IPR007410 Copper chaperone PCuAC VIBNI_A1004 96909b9922537f4ead409fef2144ad4e 168 SUPERFAMILY SSF110087 44 163 1.31E-37 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily VIBNI_A1004 96909b9922537f4ead409fef2144ad4e 168 Gene3D G3DSA:2.60.40.1890 53 167 6.3E-32 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 390 2.3E-40 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.7E-36 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 SUPERFAMILY SSF55347 126 274 2.65E-62 T 15-10-2018 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.346 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Gene3D G3DSA:1.10.1740.10 312 401 1.0E-27 T 15-10-2018 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Gene3D G3DSA:3.40.50.720 1 150 1.7E-53 T 15-10-2018 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.6E-46 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 PIRSF PIRSF006205 1 401 4.4E-154 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 394 4.2E-167 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 SUPERFAMILY SSF51735 2 150 7.34E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2498 dba6fb33dfaaf08074172cd41968df74 402 SUPERFAMILY SSF69055 301 399 1.02E-30 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 Gene3D G3DSA:3.90.1150.10 13 407 7.4E-160 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 SUPERFAMILY SSF53383 8 410 1.75E-121 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 Gene3D G3DSA:3.40.640.10 40 305 7.4E-160 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 13 414 2.9E-169 T 15-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 Pfam PF00266 Aminotransferase class-V 29 403 2.2E-144 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 PIRSF PIRSF005572 276 413 5.9E-4 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VIBNI_B2118 c1536b416dda65044bdcd8d510f08ee7 415 PIRSF PIRSF005572 26 263 4.2E-44 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 637 2.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 596 2.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 618 2.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 582 2.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 1.6E-14 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 SUPERFAMILY SSF51206 201 310 7.73E-19 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 SUPERFAMILY SSF55874 484 639 6.94E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 SUPERFAMILY SSF47384 335 370 6.67E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 Gene3D G3DSA:2.60.120.10 173 317 1.3E-18 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 638 1.7E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 SMART SM00387 527 640 8.2E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1126 144312f05c58f1b609ac68d20ec175a1 647 Gene3D G3DSA:3.30.565.10 488 647 4.3E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Gene3D G3DSA:2.40.30.10 171 365 8.2E-30 T 15-10-2018 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 SUPERFAMILY SSF52343 371 493 1.96E-31 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Pfam PF00175 Oxidoreductase NAD-binding domain 381 480 4.1E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Gene3D G3DSA:1.20.990.10 213 310 8.2E-30 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Gene3D G3DSA:3.40.50.360 1 157 2.7E-40 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Gene3D G3DSA:3.40.50.80 371 516 3.0E-37 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 SUPERFAMILY SSF63380 164 372 3.93E-35 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00369 Flavodoxin signature 88 98 2.6E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00369 Flavodoxin signature 58 69 2.6E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00369 Flavodoxin signature 9 22 2.6E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00369 Flavodoxin signature 112 131 2.6E-12 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 418 429 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 312 319 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 380 399 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 405 414 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 472 480 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 449 465 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 203 213 5.9E-18 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 SUPERFAMILY SSF52218 8 149 1.72E-37 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0139 df07cfc21c83a348739cbcea9583b5ac 516 Pfam PF00258 Flavodoxin 10 130 4.9E-25 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 SUPERFAMILY SSF51011 621 723 5.4E-28 T 15-10-2018 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 SUPERFAMILY SSF51445 177 614 6.43E-108 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Pfam PF00128 Alpha amylase, catalytic domain 273 347 1.3E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 SUPERFAMILY SSF81296 136 191 1.12E-6 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 SMART SM00642 248 592 4.4E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Gene3D G3DSA:2.60.40.1180 621 724 2.5E-30 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 126 205 3.2E-19 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 89 724 41.058 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 PIRSF PIRSF000463 7 724 1.4E-279 T 15-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Gene3D G3DSA:2.60.40.10 3 218 1.4E-52 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 723 4.1E-17 T 15-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 SUPERFAMILY SSF81296 19 102 1.42E-13 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 Gene3D G3DSA:3.20.20.80 232 610 7.3E-161 T 15-10-2018 VIBNI_B1559 090135de579ac40e380c428ed0bdee95 724 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 113 721 4.0E-249 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VIBNI_A1541 3f3b9e63618b58c870bb1fdd500f12e4 255 Gene3D G3DSA:3.90.870.10 1 255 2.1E-105 T 15-10-2018 VIBNI_A1541 3f3b9e63618b58c870bb1fdd500f12e4 255 SUPERFAMILY SSF55821 6 193 3.97E-22 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VIBNI_A1541 3f3b9e63618b58c870bb1fdd500f12e4 255 Pfam PF01300 Telomere recombination 18 192 2.6E-12 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 Pfam PF11563 Protoglobin 13 159 6.3E-28 T 15-10-2018 VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 Gene3D G3DSA:1.10.490.10 11 164 5.0E-32 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 SUPERFAMILY SSF46458 10 154 1.41E-32 T 15-10-2018 IPR009050 Globin-like superfamily VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 Gene3D G3DSA:3.30.750.24 173 291 2.1E-35 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 Pfam PF01740 STAS domain 184 283 1.0E-9 T 15-10-2018 IPR002645 STAS domain VIBNI_A1562 af2cec9c89321364ef45a6c1f69a44fe 300 SUPERFAMILY SSF52091 175 287 6.28E-18 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 SUPERFAMILY SSF56024 10 186 5.02E-27 T 15-10-2018 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 PIRSF PIRSF000850 2 446 1.2E-213 T 15-10-2018 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 SUPERFAMILY SSF56024 246 417 1.57E-25 T 15-10-2018 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 SMART SM00155 126 152 0.027 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 SMART SM00155 347 374 0.0012 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 Gene3D G3DSA:3.30.870.10 12 442 2.0E-165 T 15-10-2018 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 Pfam PF13091 PLD-like domain 252 402 2.7E-25 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 Pfam PF13091 PLD-like domain 35 150 3.4E-7 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A3339 05c96a62fc2ccf68560fe4da56aa27d4 446 Gene3D G3DSA:3.30.870.10 18 225 2.0E-165 T 15-10-2018 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 SUPERFAMILY SSF53383 10 431 5.17E-182 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 18 432 53.188 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 PIRSF PIRSF000412 3 432 9.6E-169 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 Gene3D G3DSA:3.90.1150.10 22 403 1.1E-186 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 Gene3D G3DSA:3.40.640.10 48 299 1.1E-186 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 Pfam PF00464 Serine hydroxymethyltransferase 20 396 3.1E-176 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_B0816 9aa1ac9359a4cd9354bb82c5944a68d4 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 233 249 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 SUPERFAMILY SSF53335 10 367 5.53E-56 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 1.1E-191 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.04 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 368 5.8E-188 T 15-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 Gene3D G3DSA:3.40.50.150 13 363 2.4E-141 T 15-10-2018 VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VIBNI_A3351 760872eb21a1625a88868fda7d3611e2 369 Gene3D G3DSA:3.40.1350.30 45 189 2.4E-141 T 15-10-2018 VIBNI_A0286 9ff41f11bffc1a28e74193a44a2ca314 161 Pfam PF03737 Aldolase/RraA 6 153 3.0E-41 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_A0286 9ff41f11bffc1a28e74193a44a2ca314 161 SUPERFAMILY SSF89562 1 158 1.09E-47 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_A0286 9ff41f11bffc1a28e74193a44a2ca314 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 154 5.4E-67 T 15-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VIBNI_A0286 9ff41f11bffc1a28e74193a44a2ca314 161 Gene3D G3DSA:3.50.30.40 1 161 8.3E-64 T 15-10-2018 VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 SMART SM00490 258 339 7.5E-31 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 Pfam PF00271 Helicase conserved C-terminal domain 234 339 6.6E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.7E-53 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 SUPERFAMILY SSF52540 76 360 7.17E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 SMART SM00487 20 222 7.2E-59 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 Gene3D G3DSA:3.40.50.300 219 413 2.8E-46 T 15-10-2018 VIBNI_B0910 45f371a2f5ba662ed25a8406afe60409 416 Gene3D G3DSA:3.40.50.300 1 218 2.8E-77 T 15-10-2018 VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 PIRSF PIRSF004681 1 139 3.2E-45 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 Gene3D G3DSA:2.60.120.460 2 139 2.3E-43 T 15-10-2018 IPR035917 YjbQ-like superfamily VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 138 8.3E-46 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 SUPERFAMILY SSF111038 1 138 1.57E-50 T 15-10-2018 IPR035917 YjbQ-like superfamily VIBNI_A3541 1dbd33ab713615fa6eb3601821b9704d 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 6.6E-39 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 SMART SM00464 10 201 1.2E-76 T 15-10-2018 IPR003111 Lon, substrate-binding domain VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 SUPERFAMILY SSF88697 10 200 5.96E-49 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Gene3D G3DSA:2.30.130.40 1 117 4.9E-35 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Gene3D G3DSA:1.10.8.60 490 583 2.8E-32 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.3E-41 T 15-10-2018 IPR003111 Lon, substrate-binding domain VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 SUPERFAMILY SSF54211 594 769 4.55E-58 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Gene3D G3DSA:1.20.58.1480 119 244 3.1E-45 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.795 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 SUPERFAMILY SSF52540 312 586 1.16E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 2.7E-18 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.9E-56 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.9E-56 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.9E-56 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.9E-56 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.9E-56 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 SMART SM00382 347 491 5.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Gene3D G3DSA:3.30.230.10 584 771 8.2E-85 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 PIRSF PIRSF001174 1 774 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Gene3D G3DSA:3.40.50.300 312 489 1.4E-61 T 15-10-2018 VIBNI_A2426 48c22ed18e00698893c54b8445521c32 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 6.3E-97 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 Gene3D G3DSA:3.65.10.10 242 419 7.7E-162 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 SUPERFAMILY SSF55205 1 424 7.46E-145 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 Gene3D G3DSA:3.65.10.10 20 224 7.7E-162 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 9.8E-160 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 9.4E-147 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 PIRSF PIRSF000505 1 426 7.4E-157 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VIBNI_A2123 28c277c9469f5b3e7d2391d36b63386e 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.227 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VIBNI_A2204 2b566c7b4ebdd127a5b5c6213a3f075a 372 Pfam PF07143 CrtC N-terminal lipocalin domain 77 246 7.4E-45 T 15-10-2018 IPR010791 AttH domain VIBNI_A2204 2b566c7b4ebdd127a5b5c6213a3f075a 372 SUPERFAMILY SSF159245 54 372 2.09E-91 T 15-10-2018 VIBNI_A2204 2b566c7b4ebdd127a5b5c6213a3f075a 372 Gene3D G3DSA:2.40.370.10 250 372 6.7E-20 T 15-10-2018 IPR023374 AttH-like domain superfamily VIBNI_A2204 2b566c7b4ebdd127a5b5c6213a3f075a 372 Gene3D G3DSA:2.40.370.10 65 249 1.9E-55 T 15-10-2018 IPR023374 AttH-like domain superfamily VIBNI_A2204 2b566c7b4ebdd127a5b5c6213a3f075a 372 Pfam PF17186 Lipocalin-like domain 249 372 9.6E-30 T 15-10-2018 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 Pfam PF09278 MerR, DNA binding 45 110 4.1E-16 T 15-10-2018 IPR015358 Transcription regulator MerR, DNA binding VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 3 141 2.0E-65 T 15-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 Pfam PF00376 MerR family regulatory protein 6 40 3.3E-12 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 SUPERFAMILY SSF46955 5 125 8.06E-27 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.4E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.4E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 5.4E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 SMART SM00422 3 71 3.3E-23 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0059 776f035a2b46e99000dfbd92842eb798 142 Gene3D G3DSA:1.10.1660.10 2 126 8.8E-31 T 15-10-2018 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 PRINTS PR00502 NUDIX hydrolase family signature 46 61 3.7E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 PRINTS PR00502 NUDIX hydrolase family signature 32 46 3.7E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 SUPERFAMILY SSF55811 5 128 3.66E-24 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 Gene3D G3DSA:3.90.79.10 4 131 2.0E-23 T 15-10-2018 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 Pfam PF00293 NUDIX domain 5 124 9.3E-22 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B2151 dcc921eab7386f93105aae5ca2b77a58 132 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A0842 3789690fa779d4108549a112ccda5d35 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 136 1.1E-54 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0842 3789690fa779d4108549a112ccda5d35 139 Gene3D G3DSA:2.170.150.20 1 136 4.4E-59 T 15-10-2018 VIBNI_A0842 3789690fa779d4108549a112ccda5d35 139 Pfam PF01641 SelR domain 14 132 2.7E-52 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0842 3789690fa779d4108549a112ccda5d35 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 36.433 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0842 3789690fa779d4108549a112ccda5d35 139 SUPERFAMILY SSF51316 8 135 4.03E-57 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_A1483 41664409f88fd94ab7c30408a06df5e8 337 Gene3D G3DSA:3.40.50.2000 170 320 1.0E-27 T 15-10-2018 VIBNI_A1483 41664409f88fd94ab7c30408a06df5e8 337 Pfam PF13439 Glycosyltransferase Family 4 19 165 4.2E-18 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_A1483 41664409f88fd94ab7c30408a06df5e8 337 SUPERFAMILY SSF53756 17 335 5.07E-59 T 15-10-2018 VIBNI_A1483 41664409f88fd94ab7c30408a06df5e8 337 Pfam PF00534 Glycosyl transferases group 1 170 286 1.2E-22 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1483 41664409f88fd94ab7c30408a06df5e8 337 Gene3D G3DSA:3.40.50.2000 1 169 5.5E-20 T 15-10-2018 VIBNI_A2162 03368d69c1b117d63ba50c354e176872 276 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 273 2.3E-67 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A2162 03368d69c1b117d63ba50c354e176872 276 SUPERFAMILY SSF51569 2 271 6.78E-71 T 15-10-2018 VIBNI_A2162 03368d69c1b117d63ba50c354e176872 276 PIRSF PIRSF001359 1 275 4.8E-58 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A2162 03368d69c1b117d63ba50c354e176872 276 Gene3D G3DSA:3.20.20.70 1 275 3.4E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3194 4d870379a1570e06ad1874c1cc53e4f3 184 Gene3D G3DSA:2.40.10.330 71 121 9.0E-60 T 15-10-2018 VIBNI_A3194 4d870379a1570e06ad1874c1cc53e4f3 184 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 5.5E-13 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A3194 4d870379a1570e06ad1874c1cc53e4f3 184 SUPERFAMILY SSF54534 2 140 7.46E-36 T 15-10-2018 VIBNI_A3194 4d870379a1570e06ad1874c1cc53e4f3 184 Gene3D G3DSA:3.10.50.40 3 154 9.0E-60 T 15-10-2018 VIBNI_A1014 5750571f8db6314a8443640fd1150195 181 Gene3D G3DSA:3.40.630.30 3 174 1.8E-40 T 15-10-2018 VIBNI_A1014 5750571f8db6314a8443640fd1150195 181 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 1.6E-22 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1014 5750571f8db6314a8443640fd1150195 181 SUPERFAMILY SSF55729 3 172 1.25E-38 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 Gene3D G3DSA:3.90.650.10 172 346 1.1E-72 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.0E-39 T 15-10-2018 IPR010918 PurM-like, C-terminal domain VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 SUPERFAMILY SSF56042 172 342 5.38E-62 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 SUPERFAMILY SSF55326 8 171 4.19E-54 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.725 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 2.0E-150 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 Gene3D G3DSA:3.30.1330.10 7 171 6.1E-69 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A2470 6e1588e24270fe7740291f3d73afa884 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 1.2E-15 T 15-10-2018 IPR016188 PurM-like, N-terminal domain VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 SUPERFAMILY SSF55874 301 444 4.85E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 2.5E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 2.5E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 2.5E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 2.5E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 SMART SM00387 334 444 4.0E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 442 3.4E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 Gene3D G3DSA:3.30.565.10 299 447 4.5E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 SUPERFAMILY SSF47384 209 286 4.32E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0195 8baff4bb6a6a1aab29343812df6d2029 462 Gene3D G3DSA:1.10.287.130 177 289 2.7E-15 T 15-10-2018 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SMART SM00028 290 323 20.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SMART SM00028 330 363 91.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SMART SM00028 370 403 93.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SMART SM00028 250 283 4.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SMART SM00028 84 117 38.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SUPERFAMILY SSF48452 328 436 1.02E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 Gene3D G3DSA:1.25.40.10 323 489 5.3E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 Gene3D G3DSA:3.30.70.270 510 703 1.2E-5 T 15-10-2018 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 Gene3D G3DSA:1.25.40.10 149 322 8.5E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 Pfam PF14938 Soluble NSF attachment protein, SNAP 192 364 1.7E-7 T 15-10-2018 VIBNI_A2519 a81f3f14223a14fe3418f5b22a4f74f6 754 SUPERFAMILY SSF48452 175 356 9.48E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2578 626fd0d64f57f5139aa0dd5db2361bed 150 Pfam PF01475 Ferric uptake regulator family 10 130 1.6E-46 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VIBNI_A2578 626fd0d64f57f5139aa0dd5db2361bed 150 Gene3D G3DSA:3.30.1490.190 85 141 7.6E-23 T 15-10-2018 VIBNI_A2578 626fd0d64f57f5139aa0dd5db2361bed 150 Gene3D G3DSA:1.10.10.10 1 84 1.6E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2578 626fd0d64f57f5139aa0dd5db2361bed 150 SUPERFAMILY SSF46785 5 135 1.3E-43 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 SUPERFAMILY SSF47616 75 194 1.18E-21 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 Gene3D G3DSA:3.40.30.10 1 78 4.2E-25 T 15-10-2018 VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 Pfam PF13410 Glutathione S-transferase, C-terminal domain 116 179 1.3E-8 T 15-10-2018 VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 Gene3D G3DSA:1.20.1050.10 83 206 2.0E-18 T 15-10-2018 VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 72 9.9E-19 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B1419 cbf47edcf4b3eaff34b52bba80eea883 258 SUPERFAMILY SSF52833 1 98 1.7E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1278 1174e3bd38d83f568166048bba513396 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 7.6E-186 T 15-10-2018 IPR015004 Protein of unknown function DUF1852 VIBNI_B1278 1174e3bd38d83f568166048bba513396 324 PIRSF PIRSF034367 1 324 1.5E-197 T 15-10-2018 IPR015004 Protein of unknown function DUF1852 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 Pfam PF00186 Dihydrofolate reductase 2 159 1.3E-62 T 15-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 PIRSF PIRSF000194 1 161 1.8E-64 T 15-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 9.3E-15 T 15-10-2018 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 PRINTS PR00070 Dihydrofolate reductase signature 92 106 9.3E-15 T 15-10-2018 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 9.3E-15 T 15-10-2018 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 9.3E-15 T 15-10-2018 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 SUPERFAMILY SSF53597 1 160 1.02E-58 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A2921 3e2d36abe5908b0609d79e200318b862 161 Gene3D G3DSA:3.40.430.10 1 161 5.1E-61 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A1512 3f25375339f1099970e4dcd973a7e57b 344 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 52 329 3.6E-61 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VIBNI_A1512 3f25375339f1099970e4dcd973a7e57b 344 Gene3D G3DSA:3.40.630.10 2 343 1.1E-110 T 15-10-2018 VIBNI_A1512 3f25375339f1099970e4dcd973a7e57b 344 PIRSF PIRSF017020 4 335 1.9E-118 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VIBNI_A1512 3f25375339f1099970e4dcd973a7e57b 344 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 341 117.769 T 15-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VIBNI_A1512 3f25375339f1099970e4dcd973a7e57b 344 SUPERFAMILY SSF53187 9 328 1.19E-71 T 15-10-2018 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 218 28.588 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 SUPERFAMILY SSF63848 112 217 1.44E-30 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 Gene3D G3DSA:2.160.20.70 112 219 7.6E-31 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 217 5.7E-75 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 114 214 5.5E-32 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 Gene3D G3DSA:3.30.750.120 2 111 6.8E-34 T 15-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VIBNI_A2457 942702256db84bf6d5932c1b154ee50c 219 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 2 101 1.4E-31 T 15-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Gene3D G3DSA:1.10.8.60 313 385 2.1E-13 T 15-10-2018 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 SMART SM00382 164 295 4.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Pfam PF02954 Bacterial regulatory protein, Fis family 398 436 1.9E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Gene3D G3DSA:1.10.10.60 386 441 6.4E-12 T 15-10-2018 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Gene3D G3DSA:3.40.50.2300 1 136 2.5E-33 T 15-10-2018 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Pfam PF00158 Sigma-54 interaction domain 144 307 3.2E-62 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 SUPERFAMILY SSF46689 386 439 1.75E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 SUPERFAMILY SSF52172 4 188 1.99E-39 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Gene3D G3DSA:3.40.50.300 137 312 8.8E-56 T 15-10-2018 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 SMART SM00448 3 114 1.7E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 SUPERFAMILY SSF52540 144 367 1.28E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1504 6fb1930b210f20d50ca14be2976d3022 446 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0611 dff3006ca00116813bf196fa45cf6f77 701 Pfam PF00593 TonB dependent receptor 288 699 5.9E-38 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B0611 dff3006ca00116813bf196fa45cf6f77 701 SUPERFAMILY SSF56935 47 701 2.29E-94 T 15-10-2018 VIBNI_B0611 dff3006ca00116813bf196fa45cf6f77 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 181 2.8E-11 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B0611 dff3006ca00116813bf196fa45cf6f77 701 Gene3D G3DSA:2.40.170.20 59 701 5.0E-95 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1422 1491 1.6E-21 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Pfam PF05593 RHS Repeat 765 801 4.8E-6 T 15-10-2018 IPR031325 RHS repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Pfam PF05593 RHS Repeat 727 759 4.5E-10 T 15-10-2018 IPR031325 RHS repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Pfam PF05593 RHS Repeat 892 929 2.2E-6 T 15-10-2018 IPR031325 RHS repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Gene3D G3DSA:2.180.10.10 1130 1491 1.6E-32 T 15-10-2018 VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Pfam PF14040 Deoxyribonuclease NucA/NucB 1511 1605 5.5E-10 T 15-10-2018 IPR029476 Deoxyribonuclease NucA/NucB VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Gene3D G3DSA:3.90.930.1 709 856 9.7E-19 T 15-10-2018 VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Gene3D G3DSA:3.90.930.1 857 995 3.4E-13 T 15-10-2018 VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1282 1322 7.5E-7 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 765 804 2.1E-7 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 976 1009 0.0035 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 941 973 3.1E-4 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 744 785 1.5E-8 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 883 912 1.5E-4 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 892 933 1.5E-7 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 704 743 1.3E-5 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 786 826 9.8E-6 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 726 760 3.0E-7 T 15-10-2018 IPR006530 YD repeat VIBNI_B0330 e8a04e659d691cff6adc02888e5bcc15 1610 Pfam PF03527 RHS protein 1379 1408 1.1E-9 T 15-10-2018 IPR001826 RHS protein VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A2360 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VIBNI_B2090 ead3651b5d08c1b07ffe091f7737fa2b 301 Gene3D G3DSA:1.10.3720.10 58 299 1.1E-48 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B2090 ead3651b5d08c1b07ffe091f7737fa2b 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 288 2.9E-9 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B2090 ead3651b5d08c1b07ffe091f7737fa2b 301 SUPERFAMILY SSF161098 62 286 2.75E-42 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0623 63cfc705feea66e594753e65b314f4a3 396 Gene3D G3DSA:2.40.160.10 103 388 4.3E-5 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_A0623 63cfc705feea66e594753e65b314f4a3 396 SUPERFAMILY SSF56935 80 388 8.99E-18 T 15-10-2018 VIBNI_A2049 b7e0db7517c11160787c87b2b9fb48c4 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 1.7E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2049 b7e0db7517c11160787c87b2b9fb48c4 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.6E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2049 b7e0db7517c11160787c87b2b9fb48c4 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.6E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2049 b7e0db7517c11160787c87b2b9fb48c4 190 Gene3D G3DSA:1.10.357.10 2 181 9.6E-30 T 15-10-2018 VIBNI_A2049 b7e0db7517c11160787c87b2b9fb48c4 190 SUPERFAMILY SSF46689 4 71 3.03E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0385 6c0783df603077262cf46fa8643ca575 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 36.878 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD VIBNI_A0385 6c0783df603077262cf46fa8643ca575 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 239 4.9E-79 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD VIBNI_A0385 6c0783df603077262cf46fa8643ca575 241 SUPERFAMILY SSF48452 30 119 4.49E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0385 6c0783df603077262cf46fa8643ca575 241 Pfam PF13525 Outer membrane lipoprotein 26 234 5.4E-79 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VIBNI_A0385 6c0783df603077262cf46fa8643ca575 241 Gene3D G3DSA:1.25.40.10 28 240 1.4E-55 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 SUPERFAMILY SSF53659 4 349 1.98E-113 T 15-10-2018 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 348 3.9E-90 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 SMART SM01329 6 348 3.5E-154 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 Gene3D G3DSA:3.40.718.10 2 355 4.0E-128 T 15-10-2018 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VIBNI_A0958 0d91f96343fbf3b8861718b9fbafbea2 363 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 5 351 4.2E-146 T 15-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 SUPERFAMILY SSF53067 3 252 1.3E-64 T 15-10-2018 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 SUPERFAMILY SSF53067 251 489 1.58E-44 T 15-10-2018 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 Gene3D G3DSA:3.30.420.40 1 240 1.2E-65 T 15-10-2018 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 PIRSF PIRSF000538 1 497 2.7E-95 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 442 1.9E-18 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 Gene3D G3DSA:3.30.420.40 251 492 6.6E-46 T 15-10-2018 VIBNI_A1903 d694b425d7b55a56ac41eec3a7a711ec 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.5E-82 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Pfam PF01171 PP-loop family 19 199 7.5E-54 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 309 22.006 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 SUPERFAMILY SSF56037 321 437 7.85E-30 T 15-10-2018 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Pfam PF11734 TilS substrate C-terminal domain 367 436 3.2E-23 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Gene3D G3DSA:3.40.50.620 7 232 1.2E-67 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Pfam PF09179 TilS substrate binding domain 248 314 1.9E-15 T 15-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 368 413 7.0E-16 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 SMART SM00977 367 436 6.5E-22 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 202 3.3E-51 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 SUPERFAMILY SSF52402 10 232 7.72E-58 T 15-10-2018 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 Gene3D G3DSA:1.20.59.20 233 317 7.4E-25 T 15-10-2018 VIBNI_A2487 b7c2546bb1f082c6e14de8133aa413c7 438 SUPERFAMILY SSF82829 235 318 3.01E-22 T 15-10-2018 VIBNI_A0332 38ae8d79467f7872c7a860af1cff7d54 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.059 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VIBNI_A0332 38ae8d79467f7872c7a860af1cff7d54 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 1.9E-94 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VIBNI_A0332 38ae8d79467f7872c7a860af1cff7d54 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 256 8.2E-82 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VIBNI_A0332 38ae8d79467f7872c7a860af1cff7d54 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 SUPERFAMILY SSF52283 19 136 2.16E-10 T 15-10-2018 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 317 7.4E-6 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 292 1.3E-36 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 Gene3D G3DSA:3.40.50.720 8 312 1.5E-90 T 15-10-2018 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 Gene3D G3DSA:3.40.50.720 105 291 1.5E-90 T 15-10-2018 VIBNI_A0796 a46698472090814dc16fc635d8859597 343 SUPERFAMILY SSF51735 108 293 1.87E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 SUPERFAMILY SSF56801 37 630 5.89E-115 T 15-10-2018 VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 645 1.9E-237 T 15-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 Gene3D G3DSA:3.30.300.30 529 653 2.5E-15 T 15-10-2018 VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 Gene3D G3DSA:3.40.50.12780 77 526 2.6E-51 T 15-10-2018 VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 275 286 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B1345 377ded49a4b1eb3c9dfe269173b6e3f9 655 Pfam PF00501 AMP-binding enzyme 105 530 1.9E-41 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 Pfam PF02033 Ribosome-binding factor A 7 110 6.6E-30 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 SUPERFAMILY SSF89919 2 105 6.41E-31 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 7.1E-35 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 1.0E-43 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 25.6 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VIBNI_A2796 d50457c113358770dd8049648f9e0e81 131 Gene3D G3DSA:3.30.300.20 1 106 6.6E-34 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A1494 be0bd3f281d262f567ff0f09ef5a88c9 180 PIRSF PIRSF006135 3 179 1.8E-55 T 15-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VIBNI_A1494 be0bd3f281d262f567ff0f09ef5a88c9 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 175 1.2E-58 T 15-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VIBNI_A1494 be0bd3f281d262f567ff0f09ef5a88c9 180 SUPERFAMILY SSF52540 5 177 1.12E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1494 be0bd3f281d262f567ff0f09ef5a88c9 180 Gene3D G3DSA:3.40.50.300 5 177 2.9E-58 T 15-10-2018 VIBNI_A1332 b93920e65504a9718de4eee00df253dc 400 Gene3D G3DSA:3.20.20.70 12 383 2.0E-105 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1332 b93920e65504a9718de4eee00df253dc 400 Pfam PF01180 Dihydroorotate dehydrogenase 63 366 1.0E-64 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VIBNI_A1332 b93920e65504a9718de4eee00df253dc 400 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 318 338 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VIBNI_A1332 b93920e65504a9718de4eee00df253dc 400 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 16 380 4.1E-84 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VIBNI_A1332 b93920e65504a9718de4eee00df253dc 400 SUPERFAMILY SSF51395 15 381 3.66E-72 T 15-10-2018 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 442 1.3E-26 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 SUPERFAMILY SSF53067 252 490 1.62E-48 T 15-10-2018 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 PIRSF PIRSF000538 3 496 9.1E-121 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 1.9E-62 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 Gene3D G3DSA:3.30.420.40 260 500 5.4E-58 T 15-10-2018 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 SUPERFAMILY SSF53067 6 252 5.06E-68 T 15-10-2018 VIBNI_B1793 82b05abbaad9d92542988b359873fdb0 500 Gene3D G3DSA:3.30.420.40 2 241 1.1E-78 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Pfam PF01966 HD domain 452 584 1.5E-12 T 15-10-2018 IPR006674 HD domain VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 PIRSF PIRSF006288 6 873 0.0 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SUPERFAMILY SSF55021 795 862 1.16E-9 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 327.44 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Gene3D G3DSA:1.10.3210.10 435 580 2.4E-9 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 867 0.0 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Pfam PF01842 ACT domain 801 847 1.6E-6 T 15-10-2018 IPR002912 ACT domain VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SUPERFAMILY SSF109604 418 542 8.47E-14 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SUPERFAMILY SSF81593 190 310 2.04E-9 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Pfam PF01909 Nucleotidyltransferase domain 69 106 6.7E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SMART SM00471 447 594 1.3E-9 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SUPERFAMILY SSF81301 35 172 9.54E-19 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.3E-35 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 Gene3D G3DSA:3.30.70.260 794 873 7.3E-6 T 15-10-2018 VIBNI_A2506 093afcaf54bb5f9e174e45660f33a4b2 873 SUPERFAMILY SSF55021 688 767 2.79E-9 T 15-10-2018 VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 PRINTS PR00160 Glutaredoxin signature 4 22 1.3E-11 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 PRINTS PR00160 Glutaredoxin signature 46 59 1.3E-11 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 PRINTS PR00160 Glutaredoxin signature 60 73 1.3E-11 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 SUPERFAMILY SSF52833 1 87 2.84E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 Pfam PF00462 Glutaredoxin 4 63 4.3E-22 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 Gene3D G3DSA:3.40.30.10 1 90 4.9E-27 T 15-10-2018 VIBNI_B0899 2fb9d20fd80569b68d09132cbc810d78 92 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.1E-31 T 15-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 6.1E-43 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 6.1E-43 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 6.1E-43 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 6.1E-43 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.5E-25 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_A2800 03314939fb373f75b7ed0afca2fec787 114 Pfam PF03840 Preprotein translocase SecG subunit 4 71 4.6E-22 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 SMART SM00346 16 105 5.6E-8 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 SUPERFAMILY SSF46785 20 83 8.67E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 Pfam PF09339 IclR helix-turn-helix domain 20 67 5.6E-12 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 Gene3D G3DSA:1.10.10.10 18 87 4.7E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 Pfam PF01614 Bacterial transcriptional regulator 133 256 3.5E-30 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 Gene3D G3DSA:3.30.450.40 89 261 1.5E-49 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B0183 1e9011f5f231854a47b7f578f501baa6 271 SUPERFAMILY SSF55781 89 256 3.73E-44 T 15-10-2018 VIBNI_A0647 7ef5c040732b91145baaac68145749c4 151 Pfam PF00156 Phosphoribosyl transferase domain 27 145 4.9E-15 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VIBNI_A0647 7ef5c040732b91145baaac68145749c4 151 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 151 37.747 T 15-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VIBNI_A0647 7ef5c040732b91145baaac68145749c4 151 SUPERFAMILY SSF53271 5 147 2.27E-29 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A0647 7ef5c040732b91145baaac68145749c4 151 Gene3D G3DSA:3.40.50.2020 1 151 5.4E-42 T 15-10-2018 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 PIRSF PIRSF000382 3 760 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 9.0E-122 T 15-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 SUPERFAMILY SSF51726 396 758 1.03E-112 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 4.4E-150 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 Gene3D G3DSA:3.20.20.210 8 524 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 4 758 36.028 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 SUPERFAMILY SSF51726 6 393 1.11E-110 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A2224 b0b5fa7b89d9d15bf9acd79e3d031d4e 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 758 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_B1521 f4164595ea7beb946634656288d0347e 150 Gene3D G3DSA:3.20.80.10 1 146 3.6E-43 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B1521 f4164595ea7beb946634656288d0347e 150 SMART SM00871 3 147 8.0E-20 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B1521 f4164595ea7beb946634656288d0347e 150 Pfam PF14526 Integron-associated effector binding protein 5 146 6.2E-21 T 15-10-2018 IPR029441 Integron-associated effector binding protein VIBNI_B1521 f4164595ea7beb946634656288d0347e 150 SUPERFAMILY SSF55136 5 148 2.2E-14 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A1746 e870158e2b0c50264eb2dadbd67afb44 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 1.9E-116 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1746 e870158e2b0c50264eb2dadbd67afb44 477 SUPERFAMILY SSF81442 13 467 1.44E-122 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1746 e870158e2b0c50264eb2dadbd67afb44 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1746 e870158e2b0c50264eb2dadbd67afb44 477 Gene3D G3DSA:1.20.210.10 6 475 2.4E-206 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1746 e870158e2b0c50264eb2dadbd67afb44 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 9.4E-230 T 15-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 Pfam PF01368 DHH family 71 202 5.0E-9 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 Gene3D G3DSA:3.10.310.30 325 455 1.6E-29 T 15-10-2018 VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 Gene3D G3DSA:3.90.1640.30 44 323 1.9E-89 T 15-10-2018 VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 SUPERFAMILY SSF64182 45 464 4.19E-117 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 Pfam PF02272 DHHA1 domain 319 451 3.9E-27 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VIBNI_A0319 1e2931462fe988ef9164cf9c89ac6f5b 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 1.7E-157 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.0E-171 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 Pfam PF02274 Amidinotransferase 18 403 2.9E-111 T 15-10-2018 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.191 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PIRSF PIRSF006356 1 406 2.9E-156 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 15-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 SUPERFAMILY SSF55909 3 406 9.62E-129 T 15-10-2018 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 Gene3D G3DSA:1.10.3930.10 68 148 5.7E-147 T 15-10-2018 VIBNI_A3123 3d1866218b7d0f91492f12074202eb17 406 Gene3D G3DSA:3.75.10.10 6 403 5.7E-147 T 15-10-2018 VIBNI_A3858 fff2ef87f7cf7657dcad69a3071ec8de 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 39 137 8.7E-29 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A3858 fff2ef87f7cf7657dcad69a3071ec8de 247 SUPERFAMILY SSF161098 42 228 6.93E-46 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3858 fff2ef87f7cf7657dcad69a3071ec8de 247 Gene3D G3DSA:1.10.3720.10 33 243 1.5E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3858 fff2ef87f7cf7657dcad69a3071ec8de 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 243 5.3E-25 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 Gene3D G3DSA:3.40.50.150 106 283 6.3E-47 T 15-10-2018 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 PIRSF PIRSF037167 2 307 1.9E-150 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 68 270 1.4E-59 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 Gene3D G3DSA:1.10.8.10 16 105 4.1E-5 T 15-10-2018 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 SUPERFAMILY SSF53335 16 294 2.41E-50 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.2E-139 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 300 1.6E-96 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 Pfam PF05175 Methyltransferase small domain 134 216 3.6E-18 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VIBNI_A0771 fa958bdf071f2b45375210cdb9644278 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.241 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VIBNI_A2816 89617578924419decc3633179b29d629 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 3.5E-18 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VIBNI_A2816 89617578924419decc3633179b29d629 113 SUPERFAMILY SSF89360 7 99 1.86E-29 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A2816 89617578924419decc3633179b29d629 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 5.8E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VIBNI_A2816 89617578924419decc3633179b29d629 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VIBNI_A2816 89617578924419decc3633179b29d629 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 36.038 T 15-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VIBNI_A2816 89617578924419decc3633179b29d629 113 Gene3D G3DSA:2.60.300.12 7 113 2.7E-32 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A3834 51f5f45e697ca1572aad18dda0d6c9a3 367 SUPERFAMILY SSF102405 81 287 2.88E-41 T 15-10-2018 VIBNI_A3834 51f5f45e697ca1572aad18dda0d6c9a3 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 286 4.9E-78 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VIBNI_A3834 51f5f45e697ca1572aad18dda0d6c9a3 367 Pfam PF02481 DNA recombination-mediator protein A 75 278 3.3E-77 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VIBNI_A3834 51f5f45e697ca1572aad18dda0d6c9a3 367 Gene3D G3DSA:1.10.10.10 296 363 4.2E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3834 51f5f45e697ca1572aad18dda0d6c9a3 367 Gene3D G3DSA:3.40.50.450 1 291 6.7E-97 T 15-10-2018 VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 SUPERFAMILY SSF52540 9 242 2.4E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 SMART SM00382 34 253 1.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 Gene3D G3DSA:3.40.50.300 3 249 1.9E-66 T 15-10-2018 VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 Pfam PF00005 ABC transporter 25 181 6.2E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 9 250 1.8E-94 T 15-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 VIBNI_B1176 390b0b8d28499fa20312f341a7795a87 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 SUPERFAMILY SSF46785 10 93 4.03E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 Gene3D G3DSA:3.40.190.10 103 288 4.0E-47 T 15-10-2018 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 SUPERFAMILY SSF53850 96 293 7.78E-26 T 15-10-2018 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 Gene3D G3DSA:1.10.10.10 9 97 2.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.6E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.3E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 Pfam PF03466 LysR substrate binding domain 93 290 1.0E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1031 a1cc02dccdfafe1944b54c5fdb0de268 295 Gene3D G3DSA:3.40.190.10 166 263 4.0E-47 T 15-10-2018 VIBNI_B0487 13ef4134d42db88dcb931c21bea94426 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0487 13ef4134d42db88dcb931c21bea94426 255 Gene3D G3DSA:3.40.50.300 3 245 6.6E-63 T 15-10-2018 VIBNI_B0487 13ef4134d42db88dcb931c21bea94426 255 Pfam PF00005 ABC transporter 19 161 2.7E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0487 13ef4134d42db88dcb931c21bea94426 255 SUPERFAMILY SSF52540 4 226 2.66E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0487 13ef4134d42db88dcb931c21bea94426 255 SMART SM00382 28 209 7.6E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Gene3D G3DSA:2.60.120.260 648 775 8.1E-12 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 SUPERFAMILY SSF49785 506 642 1.35E-14 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 SUPERFAMILY SSF49785 649 774 3.26E-9 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Pfam PF07470 Glycosyl Hydrolase Family 88 53 367 6.0E-49 T 15-10-2018 IPR010905 Glycosyl hydrolase, family 88 VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Gene3D G3DSA:2.60.120.260 371 503 3.5E-24 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 SUPERFAMILY SSF48208 46 368 9.86E-27 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 SUPERFAMILY SSF49785 366 506 3.05E-18 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Gene3D G3DSA:1.50.10.10 20 369 1.2E-88 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Pfam PF00754 F5/8 type C domain 518 635 9.9E-9 T 15-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Pfam PF00754 F5/8 type C domain 379 499 1.3E-12 T 15-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain VIBNI_B0405 d4dc26dd20570f7654c9e5560e712068 775 Gene3D G3DSA:2.60.120.260 508 640 2.2E-19 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A0750 ad57495d07ce59c9c2f27e6be8aecd55 166 Pfam PF10975 Protein of unknown function (DUF2802) 68 134 6.1E-22 T 15-10-2018 IPR021244 Protein of unknown function DUF2802 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 Gene3D G3DSA:1.10.150.240 21 94 4.8E-65 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 193 2.9E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 194 8.0E-39 T 15-10-2018 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 222 5.7E-61 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 SUPERFAMILY SSF56784 4 224 5.78E-60 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 195 4.3E-13 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 189 2.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 Gene3D G3DSA:3.40.50.1000 9 216 4.8E-65 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 34.288 T 15-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 9.5E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 9.5E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.5E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A3575 2754788b0e654bb86c20a3f4fbbead78 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 9.5E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A2855 8fd023605c19ebb9af6fc6078de9fda3 553 SUPERFAMILY SSF52091 440 541 3.92E-12 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A2855 8fd023605c19ebb9af6fc6078de9fda3 553 Gene3D G3DSA:3.30.750.24 427 549 4.6E-15 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A2855 8fd023605c19ebb9af6fc6078de9fda3 553 Pfam PF00916 Sulfate permease family 11 376 9.8E-83 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VIBNI_A2855 8fd023605c19ebb9af6fc6078de9fda3 553 Pfam PF01740 STAS domain 441 532 3.0E-13 T 15-10-2018 IPR002645 STAS domain VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Gene3D G3DSA:3.40.50.261 240 388 1.2E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.057 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Pfam PF00549 CoA-ligase 262 382 9.4E-25 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Gene3D G3DSA:3.30.1490.20 21 104 1.1E-91 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 6.3E-173 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 SUPERFAMILY SSF56059 1 238 1.27E-78 T 15-10-2018 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 SUPERFAMILY SSF52210 239 385 3.79E-54 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Pfam PF08442 ATP-grasp domain 2 203 3.6E-79 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 PIRSF PIRSF001554 1 388 3.6E-154 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A2561 0a3463615e148f5183124ce650397a18 388 Gene3D G3DSA:3.30.470.20 1 234 1.1E-91 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SUPERFAMILY SSF50156 819 892 9.99E-12 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:2.30.42.10 788 887 3.4E-11 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Pfam PF07676 WD40-like Beta Propeller Repeat 539 563 3.9E-4 T 15-10-2018 IPR011659 WD40-like Beta Propeller VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Pfam PF07676 WD40-like Beta Propeller Repeat 424 447 0.038 T 15-10-2018 IPR011659 WD40-like Beta Propeller VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Pfam PF14684 Tricorn protease C1 domain 723 785 5.5E-20 T 15-10-2018 IPR028204 Tricorn protease C1 domain VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SMART SM00228 797 880 3.1E-11 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:2.120.10.30 488 606 7.1E-7 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:2.120.10.30 336 480 7.8E-10 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:3.30.750.44 721 785 4.6E-12 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SUPERFAMILY SSF50969 217 563 4.87E-22 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SUPERFAMILY SSF69304 43 316 2.75E-35 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Pfam PF03572 Peptidase family S41 919 1075 8.5E-17 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 PIRSF PIRSF036421 27 583 2.7E-69 T 15-10-2018 IPR012393 Tricorn protease GO:0008236 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 PIRSF PIRSF036421 647 1105 6.7E-84 T 15-10-2018 IPR012393 Tricorn protease GO:0008236 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:2.120.10.60 30 319 5.1E-52 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Gene3D G3DSA:3.90.226.10 898 1105 4.2E-43 T 15-10-2018 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 814 875 3.0E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SUPERFAMILY SSF52096 721 1103 5.47E-50 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_B0807 59abf1f517e52af8a168468d7e06ba21 1105 SMART SM00245 869 1077 1.5E-4 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VIBNI_A3284 8b61f928ee1c1ce6a2d51298a6a858e7 446 Pfam PF13343 Bacterial extracellular solute-binding protein 81 301 4.3E-30 T 15-10-2018 VIBNI_A3284 8b61f928ee1c1ce6a2d51298a6a858e7 446 Gene3D G3DSA:3.40.190.10 35 309 1.3E-56 T 15-10-2018 VIBNI_A3284 8b61f928ee1c1ce6a2d51298a6a858e7 446 Gene3D G3DSA:3.40.190.10 136 323 1.3E-56 T 15-10-2018 VIBNI_A3284 8b61f928ee1c1ce6a2d51298a6a858e7 446 SUPERFAMILY SSF53850 28 324 6.04E-53 T 15-10-2018 VIBNI_A3027 58a79d69637ea1b854ff104ba1fa8742 429 SUPERFAMILY SSF56349 205 399 7.06E-17 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A3027 58a79d69637ea1b854ff104ba1fa8742 429 Gene3D G3DSA:1.10.443.10 195 409 3.3E-20 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A3027 58a79d69637ea1b854ff104ba1fa8742 429 Pfam PF00589 Phage integrase family 207 355 5.0E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Pfam PF01493 GXGXG motif 1267 1452 1.3E-83 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 SUPERFAMILY SSF69336 1235 1498 9.81E-96 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Pfam PF00310 Glutamine amidotransferases class-II 21 443 8.7E-186 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Pfam PF01645 Conserved region in glutamate synthase 817 1187 8.0E-150 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Gene3D G3DSA:2.160.20.60 1239 1510 2.0E-109 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 SUPERFAMILY SSF56235 21 447 9.83E-153 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Pfam PF04898 Glutamate synthase central domain 472 756 1.7E-117 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A0279 89909ca4e2cadd0183dc70fa83ef87a3 1513 SUPERFAMILY SSF51395 451 1221 1.87E-266 T 15-10-2018 VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 Gene3D G3DSA:3.30.70.270 426 599 1.4E-49 T 15-10-2018 VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 595 1.0E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 Pfam PF07696 7TMR-DISM extracellular 2 47 177 3.5E-13 T 15-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 Pfam PF07695 7TM diverse intracellular signalling 196 390 8.0E-24 T 15-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 SMART SM00267 429 599 2.0E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 Gene3D G3DSA:2.60.40.2380 41 179 3.0E-9 T 15-10-2018 VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 SUPERFAMILY SSF55073 445 598 2.67E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1425 2689466ce950114aca165e6eb5f9318a 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 438 598 3.1E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 462 2.2E-90 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 Gene3D G3DSA:3.90.76.10 72 195 5.1E-190 T 15-10-2018 VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 SUPERFAMILY SSF53850 38 531 1.99E-144 T 15-10-2018 VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 PIRSF PIRSF002741 1 544 1.9E-114 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 Gene3D G3DSA:3.40.190.10 42 525 5.1E-190 T 15-10-2018 VIBNI_A0924 dcc9bcaf3f2e4b41e6289adec2bba5e6 544 Gene3D G3DSA:3.10.105.10 298 513 5.1E-190 T 15-10-2018 VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 SUPERFAMILY SSF46689 4 76 2.36E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 Gene3D G3DSA:1.10.357.10 1 208 9.3E-57 T 15-10-2018 VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 SUPERFAMILY SSF48498 81 207 1.96E-39 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.9E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.9E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1105 48a9887a8bc39122abf01ee685c58202 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.0E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 Gene3D G3DSA:3.40.50.720 2 245 3.1E-64 T 15-10-2018 VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 242 1.0E-50 T 15-10-2018 VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.5E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0774 7e03535f26d6ecce3521b9d47307a179 245 SUPERFAMILY SSF51735 6 243 8.75E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2933 e5aa8ef9ab2991c85eb765291577a0e6 860 Pfam PF11874 Domain of unknown function (DUF3394) 675 853 3.6E-72 T 15-10-2018 IPR021814 Protein of unknown function DUF3394 VIBNI_A2933 e5aa8ef9ab2991c85eb765291577a0e6 860 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 725 1.6E-213 T 15-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VIBNI_A2933 e5aa8ef9ab2991c85eb765291577a0e6 860 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 668 1.8E-75 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 498 508 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 Pfam PF00082 Subtilase family 212 536 4.2E-33 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 SUPERFAMILY SSF49785 633 739 5.1E-9 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 PRINTS PR00723 Subtilisin serine protease family (S8) signature 258 271 2.7E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 PRINTS PR00723 Subtilisin serine protease family (S8) signature 212 231 2.7E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 PRINTS PR00723 Subtilisin serine protease family (S8) signature 497 513 2.7E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 Gene3D G3DSA:2.60.120.260 592 771 1.8E-28 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 217 228 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 Pfam PF01483 Proprotein convertase P-domain 669 738 2.0E-6 T 15-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 262 272 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VIBNI_A0461 39aca2af92fb45460dac21656bfef809 771 SUPERFAMILY SSF52743 194 588 9.16E-53 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_A2062 5ffce22f38bdc0d5cf131054a54609a9 222 Gene3D G3DSA:2.60.120.10 2 222 5.1E-81 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2062 5ffce22f38bdc0d5cf131054a54609a9 222 SUPERFAMILY SSF51182 63 188 4.72E-7 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A2062 5ffce22f38bdc0d5cf131054a54609a9 222 Pfam PF07385 D-lyxose isomerase 1 220 9.7E-85 T 15-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 Gene3D G3DSA:3.30.9.10 134 362 9.1E-52 T 15-10-2018 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.206 T 15-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.1E-67 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 SUPERFAMILY SSF51905 1 416 1.24E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 SUPERFAMILY SSF54373 270 360 3.79E-17 T 15-10-2018 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 Gene3D G3DSA:3.50.50.60 1 74 4.9E-11 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 288 8.8E-5 T 15-10-2018 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.8E-5 T 15-10-2018 VIBNI_A2764 2afaea29db955a4f5fc0d6dc3c20f181 418 Gene3D G3DSA:3.50.50.60 102 404 9.1E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 SUPERFAMILY SSF51905 2 313 1.99E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 Gene3D G3DSA:3.50.50.60 9 311 1.8E-128 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 2.1E-124 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 3.2E-48 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.3E-40 T 15-10-2018 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.3E-40 T 15-10-2018 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.3E-40 T 15-10-2018 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.3E-40 T 15-10-2018 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.3E-40 T 15-10-2018 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 Gene3D G3DSA:3.50.50.60 118 244 1.8E-128 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A1137 8725b78a34c5897bee3ab151ba3ba2b7 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.0E-76 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VIBNI_A0006 5c62aef42b367afb880e474702d25928 416 Pfam PF00155 Aminotransferase class I and II 67 398 1.3E-28 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A0006 5c62aef42b367afb880e474702d25928 416 Gene3D G3DSA:3.40.640.10 1 416 1.0E-148 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A0006 5c62aef42b367afb880e474702d25928 416 SUPERFAMILY SSF53383 13 411 5.23E-63 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2107 f855f4650217bf9815526a3178364654 261 SUPERFAMILY SSF53335 6 241 1.06E-36 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2107 f855f4650217bf9815526a3178364654 261 Gene3D G3DSA:3.40.50.150 9 260 2.3E-58 T 15-10-2018 VIBNI_A2107 f855f4650217bf9815526a3178364654 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.303 T 15-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VIBNI_A2107 f855f4650217bf9815526a3178364654 261 Pfam PF13847 Methyltransferase domain 47 154 1.6E-13 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_A1268 4f3f7c3b05035f52bc461732b6bb6d33 346 Pfam PF01757 Acyltransferase family 6 303 2.4E-25 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_A0622 b5b61c516544aedfd81abbaaccad624c 433 SUPERFAMILY SSF51004 52 401 3.92E-9 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VIBNI_A0622 b5b61c516544aedfd81abbaaccad624c 433 Gene3D G3DSA:2.130.10.10 47 124 6.8E-7 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A0444 692da112a8e369f995dfe0811eac9a28 327 Gene3D G3DSA:3.40.190.170 23 324 4.3E-95 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A0444 692da112a8e369f995dfe0811eac9a28 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 278 2.3E-75 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A0444 692da112a8e369f995dfe0811eac9a28 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 307 7.0E-80 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A0444 692da112a8e369f995dfe0811eac9a28 327 PIRSF PIRSF006470 1 323 1.2E-91 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B0235 fbfa8432162453483653d776d0d02632 322 SUPERFAMILY SSF54427 8 150 1.32E-25 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0235 fbfa8432162453483653d776d0d02632 322 SUPERFAMILY SSF54427 190 317 5.63E-23 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0235 fbfa8432162453483653d776d0d02632 322 Pfam PF07366 SnoaL-like polyketide cyclase 18 141 2.1E-7 T 15-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VIBNI_B0235 fbfa8432162453483653d776d0d02632 322 Gene3D G3DSA:3.10.450.50 183 320 3.9E-17 T 15-10-2018 VIBNI_B0235 fbfa8432162453483653d776d0d02632 322 Gene3D G3DSA:3.10.450.50 14 157 4.7E-20 T 15-10-2018 VIBNI_B0178 5b2274663e3319ffbbe06f1fdc9ac117 461 PIRSF PIRSF004548 1 448 1.1E-142 T 15-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD VIBNI_B0178 5b2274663e3319ffbbe06f1fdc9ac117 461 Pfam PF06123 Inner membrane protein CreD 9 429 5.4E-152 T 15-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD VIBNI_A0205 1ac13119029988ce1b19d4462efacca8 148 Pfam PF06295 Protein of unknown function (DUF1043) 7 129 9.6E-44 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 VIBNI_A0205 1ac13119029988ce1b19d4462efacca8 148 PIRSF PIRSF006318 1 136 3.0E-46 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 VIBNI_B1348 b54d9dd45402907b1db34778a45d0e7d 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 281 1.9E-32 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VIBNI_B1348 b54d9dd45402907b1db34778a45d0e7d 297 SUPERFAMILY SSF161111 8 214 5.23E-36 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_B1348 b54d9dd45402907b1db34778a45d0e7d 297 Pfam PF01545 Cation efflux family 14 214 1.7E-37 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VIBNI_B1348 b54d9dd45402907b1db34778a45d0e7d 297 Gene3D G3DSA:1.20.1510.10 10 214 1.0E-23 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_A1428 1a6544c7b0c18247e543573ad47c0e02 153 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 144 1.9E-38 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VIBNI_A1428 1a6544c7b0c18247e543573ad47c0e02 153 Gene3D G3DSA:2.60.40.4150 25 152 4.9E-39 T 15-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VIBNI_A1428 1a6544c7b0c18247e543573ad47c0e02 153 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 9 148 1.7E-46 T 15-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Pfam PF00175 Oxidoreductase NAD-binding domain 388 490 4.3E-18 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 SUPERFAMILY SSF52343 381 510 1.05E-34 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Pfam PF00970 Oxidoreductase FAD-binding domain 285 378 1.2E-11 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 525 596 4.3E-11 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 SUPERFAMILY SSF54292 500 603 9.04E-26 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 SUPERFAMILY SSF50800 5 264 3.77E-15 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Pfam PF03473 MOSC domain 138 262 9.9E-31 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 PRINTS PR00409 Phthalate dioxygenase reductase family signature 328 342 4.1E-8 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 PRINTS PR00409 Phthalate dioxygenase reductase family signature 365 379 4.1E-8 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 PRINTS PR00409 Phthalate dioxygenase reductase family signature 387 406 4.1E-8 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Gene3D G3DSA:2.40.30.10 280 378 2.1E-23 T 15-10-2018 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 SUPERFAMILY SSF63380 281 377 3.87E-23 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 SUPERFAMILY SSF141673 6 133 1.05E-31 T 15-10-2018 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 8.7E-28 T 15-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Gene3D G3DSA:3.10.20.30 520 605 1.1E-19 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 Gene3D G3DSA:3.40.50.80 380 510 4.9E-30 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0850 320a7f8fdb7f92087ed9ab1b932054ee 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 554 562 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VIBNI_B1258 88d84a9d914befb2b48bd3b80f65dce0 840 Pfam PF02687 FtsX-like permease family 739 827 9.2E-8 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 SMART SM00382 28 210 1.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 SUPERFAMILY SSF52540 4 244 8.96E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 Pfam PF00005 ABC transporter 20 161 4.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 Pfam PF08402 TOBE domain 281 353 1.6E-7 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 Gene3D G3DSA:2.40.50.140 288 345 1.6E-38 T 15-10-2018 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 Gene3D G3DSA:2.40.50.100 240 362 1.6E-38 T 15-10-2018 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 Gene3D G3DSA:3.40.50.300 1 238 4.0E-75 T 15-10-2018 VIBNI_B1631 bdf72975ae877aef842501212ef3f93a 369 SUPERFAMILY SSF50331 236 362 8.5E-29 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1467 8d2e65aa3456865650cafb2c6c2629ee 226 SUPERFAMILY SSF51735 2 210 1.35E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1467 8d2e65aa3456865650cafb2c6c2629ee 226 Gene3D G3DSA:3.40.50.720 1 224 1.6E-47 T 15-10-2018 VIBNI_A1467 8d2e65aa3456865650cafb2c6c2629ee 226 Pfam PF08732 HIM1 73 166 2.6E-9 T 15-10-2018 IPR014843 Protein Him1/Fmp52 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 Gene3D G3DSA:3.60.150.10 1 360 7.5E-161 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 Pfam PF01264 Chorismate synthase 10 345 6.7E-144 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 PIRSF PIRSF001456 3 360 1.3E-144 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.002 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 SUPERFAMILY SSF103263 4 354 2.22E-150 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A0772 1b88e954600f01c748baedcf552884c8 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.9E-144 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.9E-29 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 SUPERFAMILY SSF54768 9 75 6.7E-24 T 15-10-2018 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.757 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.5E-29 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 Gene3D G3DSA:3.30.160.20 1 73 9.6E-33 T 15-10-2018 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 SUPERFAMILY SSF54211 79 158 1.19E-26 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 2.9E-68 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VIBNI_A3161 79115895b0b94e3850aabcb949c4f2db 166 Gene3D G3DSA:3.30.230.10 74 166 9.2E-36 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 Gene3D G3DSA:3.40.605.10 23 488 3.4E-164 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 SUPERFAMILY SSF53720 13 493 2.09E-162 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 Pfam PF00171 Aldehyde dehydrogenase family 27 489 3.0E-164 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 Gene3D G3DSA:3.40.309.10 266 460 3.4E-164 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A1321 65542f9eeec6281300e64378b07893f6 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 SUPERFAMILY SSF46689 5 81 5.73E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 Pfam PF01380 SIS domain 126 250 1.8E-16 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 Gene3D G3DSA:1.10.10.10 2 81 7.8E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 Gene3D G3DSA:3.40.50.10490 91 277 1.4E-45 T 15-10-2018 VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 SUPERFAMILY SSF53697 99 260 9.69E-30 T 15-10-2018 VIBNI_A2736 7c7744ce555933afab8b73d13d0c18ae 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 1.8E-18 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 Gene3D G3DSA:3.60.21.10 22 360 9.0E-133 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 4.1E-8 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 SUPERFAMILY SSF56300 23 360 4.24E-87 T 15-10-2018 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 SUPERFAMILY SSF55816 361 603 4.45E-34 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 Gene3D G3DSA:3.90.780.10 411 592 6.6E-47 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 221 238 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 434 457 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 536 555 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 28 46 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 249 272 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 PRINTS PR01607 Apyrase family signature 289 309 1.1E-25 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 15-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VIBNI_A3138 1e7eef4ac13518b26418189e359ef93e 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 2.9E-17 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 SMART SM00479 18 204 1.7E-30 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 6.0E-100 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 114.194 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 Gene3D G3DSA:3.30.420.10 9 216 9.1E-54 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 Pfam PF00929 Exonuclease 20 195 2.7E-41 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A0895 8da79f149a8149ea30ba5c7ec17e0c58 217 SUPERFAMILY SSF53098 10 208 8.68E-56 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 15-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 SUPERFAMILY SSF54821 108 206 8.24E-41 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.1E-41 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.865 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 Gene3D G3DSA:3.30.1140.32 108 208 1.3E-45 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 SUPERFAMILY SSF54814 2 106 1.6E-36 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 8.0E-98 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 Pfam PF07650 KH domain 38 111 4.0E-19 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 Gene3D G3DSA:3.30.300.20 17 107 5.9E-29 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta VIBNI_A3172 4e9c8422ace84ee272609f613d41de70 232 SMART SM00322 60 125 7.4E-8 T 15-10-2018 IPR004087 K Homology domain GO:0003676 VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Gene3D G3DSA:3.40.50.300 220 434 2.4E-52 T 15-10-2018 VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 SUPERFAMILY SSF52540 74 361 1.35E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.4E-30 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Pfam PF03880 DbpA RNA binding domain 473 540 9.4E-17 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 SMART SM00490 259 340 1.3E-34 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 SMART SM00487 25 223 8.4E-63 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 545 42.019 T 15-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Pfam PF00270 DEAD/DEAH box helicase 30 195 8.4E-50 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Gene3D G3DSA:3.30.70.330 474 543 6.1E-11 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VIBNI_B1078 83aef11ad936982db2a1989887c6fbd3 621 Gene3D G3DSA:3.40.50.300 1 219 1.6E-73 T 15-10-2018 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 SMART SM00387 428 538 1.7E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 SMART SM00304 174 226 2.7E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 Pfam PF00672 HAMP domain 176 221 7.3E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 SUPERFAMILY SSF158472 176 222 2.35E-8 T 15-10-2018 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 Gene3D G3DSA:1.10.287.130 258 382 7.1E-22 T 15-10-2018 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 495 1.7E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 Gene3D G3DSA:1.20.1480.50 138 231 5.1E-12 T 15-10-2018 VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 Gene3D G3DSA:3.30.565.10 390 546 6.8E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 537 3.4E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0894 8da6384edda9bee92fff5571c9e2e8f9 557 SUPERFAMILY SSF55874 391 536 6.81E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 346 1.1E-75 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Pfam PF00529 HlyD membrane-fusion protein of T1SS 263 332 2.7E-6 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Gene3D G3DSA:1.10.287.470 96 155 9.0E-73 T 15-10-2018 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Gene3D G3DSA:2.40.50.100 61 189 9.0E-73 T 15-10-2018 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 262 3.5E-30 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Gene3D G3DSA:2.40.420.20 273 344 9.0E-73 T 15-10-2018 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 Gene3D G3DSA:2.40.30.170 50 272 9.0E-73 T 15-10-2018 VIBNI_A3496 ef48867f945ecaf4d9e55792adc8eecf 361 SUPERFAMILY SSF111369 50 266 8.5E-40 T 15-10-2018 VIBNI_A3570 c55aef6e0f816d587a4757969ad837d1 278 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 261 1.6E-45 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VIBNI_A3570 c55aef6e0f816d587a4757969ad837d1 278 Gene3D G3DSA:3.60.130.10 1 277 1.6E-91 T 15-10-2018 VIBNI_A3570 c55aef6e0f816d587a4757969ad837d1 278 SUPERFAMILY SSF51197 6 263 2.08E-61 T 15-10-2018 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 Gene3D G3DSA:1.50.10.10 16 338 6.4E-100 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 SUPERFAMILY SSF48208 7 338 1.66E-78 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 Pfam PF01270 Glycosyl hydrolases family 8 12 332 1.5E-71 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 113 131 - T 15-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 320 334 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 239 248 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 113 131 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 177 194 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 56 69 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0370 8e26c19e475ea95ca1b6227dddeb1cff 339 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 5.4E-21 T 15-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 SUPERFAMILY SSF53244 326 473 2.93E-47 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Gene3D G3DSA:3.40.50.720 23 110 3.0E-34 T 15-10-2018 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 1.8E-20 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.6E-29 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.544 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Gene3D G3DSA:3.90.190.20 326 483 1.9E-48 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 SUPERFAMILY SSF53623 108 322 1.83E-72 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Pfam PF08245 Mur ligase middle domain 127 307 2.2E-28 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.7E-188 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 SUPERFAMILY SSF51984 23 109 8.37E-30 T 15-10-2018 VIBNI_A0230 f79890b71c9d3bc0f84597bff36dc87e 487 Gene3D G3DSA:3.40.1190.10 111 325 1.8E-84 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 Pfam PF03466 LysR substrate binding domain 98 301 1.1E-19 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 SUPERFAMILY SSF46785 7 85 5.44E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 Gene3D G3DSA:3.40.190.10 94 298 1.9E-43 T 15-10-2018 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.2E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.2E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.2E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 SUPERFAMILY SSF53850 96 301 3.08E-31 T 15-10-2018 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 Gene3D G3DSA:1.10.10.10 3 90 6.1E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 Gene3D G3DSA:3.40.190.10 175 273 1.9E-43 T 15-10-2018 VIBNI_A0518 bfb400e2f18e518faea644509a6ec0e4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.7E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.5E-44 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 Pfam PF00698 Acyl transferase domain 7 290 3.7E-38 T 15-10-2018 IPR014043 Acyl transferase VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 PIRSF PIRSF000446 1 307 3.5E-134 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 SUPERFAMILY SSF52151 4 305 7.06E-82 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.6E-126 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 Gene3D G3DSA:3.30.70.250 125 197 9.3E-109 T 15-10-2018 VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 SUPERFAMILY SSF55048 128 197 4.71E-18 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VIBNI_A2362 4a015b5fa3f84a70f829178bb7b7d076 307 Gene3D G3DSA:3.40.366.10 7 286 9.3E-109 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VIBNI_A1712 80b47d5a0180ebd891f6ac3c84552b47 177 Pfam PF11748 Protein of unknown function (DUF3306) 5 112 7.8E-20 T 15-10-2018 IPR021735 Protein of unknown function DUF3306 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 SUPERFAMILY SSF51905 5 447 5.41E-76 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 Gene3D G3DSA:3.50.50.60 10 404 3.6E-152 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 Gene3D G3DSA:3.90.700.10 248 358 3.6E-152 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PIRSF PIRSF000171 1 315 2.6E-26 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PIRSF PIRSF000171 327 533 1.7E-12 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 Pfam PF00890 FAD binding domain 10 392 3.5E-100 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.4E-6 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.4E-6 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 3.2E-207 T 15-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.5E-14 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 Gene3D G3DSA:1.20.58.100 425 536 2.0E-44 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 33 52 3.5E-7 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 197 215 3.5E-7 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 3.5E-7 T 15-10-2018 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 SUPERFAMILY SSF56425 238 353 6.58E-41 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A0106 eae22ce419275bd0930a57eebbc255f4 536 SUPERFAMILY SSF46977 425 525 6.8E-32 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 5.7E-5 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 46 67 5.7E-5 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 5.7E-5 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 PIRSF PIRSF001365 10 305 1.7E-49 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 SMART SM01130 12 303 3.1E-41 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 Gene3D G3DSA:3.20.20.70 9 303 1.8E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 SUPERFAMILY SSF51569 15 300 1.78E-52 T 15-10-2018 VIBNI_A1284 b1d911b81516f44b85310afbc372c6ee 305 Pfam PF00701 Dihydrodipicolinate synthetase family 15 297 3.2E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 SUPERFAMILY SSF46785 10 158 1.09E-33 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 Gene3D G3DSA:1.10.10.10 1 160 1.8E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 Pfam PF01047 MarR family 49 110 1.6E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 SMART SM00347 42 145 1.0E-24 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 9.8E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 9.8E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 9.8E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1913 d0b07e6ae0fcb5b8a836646e4097d0d6 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 9.8E-16 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 Pfam PF01063 Amino-transferase class IV 36 268 1.0E-45 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 SUPERFAMILY SSF56752 7 307 4.06E-103 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 Gene3D G3DSA:3.30.470.10 10 127 8.3E-107 T 15-10-2018 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 8.5E-141 T 15-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VIBNI_A3852 2ba81617ea35b23a022c0878dc56bb63 315 Gene3D G3DSA:3.20.10.10 138 289 8.3E-107 T 15-10-2018 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 3.8E-22 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 3.8E-22 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 3.8E-22 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 3.8E-22 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 3.8E-22 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 SUPERFAMILY SSF51445 14 441 8.29E-155 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 1.8E-183 T 15-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 Gene3D G3DSA:3.20.20.80 7 447 3.6E-162 T 15-10-2018 VIBNI_B1736 8cf7b213f87e8c02571dbb605cf0baf1 451 Pfam PF00232 Glycosyl hydrolase family 1 11 441 1.7E-149 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VIBNI_A1379 8cc1ba228904c86b17455fcbe7421d8a 265 Gene3D G3DSA:1.10.3720.10 64 260 2.3E-25 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1379 8cc1ba228904c86b17455fcbe7421d8a 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 1.4E-31 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1379 8cc1ba228904c86b17455fcbe7421d8a 265 SUPERFAMILY SSF161098 67 248 1.18E-31 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0668 4b026de3eb5e60be6aae7c2e24668f08 261 SUPERFAMILY SSF53474 35 259 1.24E-15 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0668 4b026de3eb5e60be6aae7c2e24668f08 261 Gene3D G3DSA:3.40.50.1820 19 260 2.1E-14 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 Gene3D G3DSA:1.10.10.10 7 81 1.9E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 SUPERFAMILY SSF55781 82 249 5.62E-47 T 15-10-2018 VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 SUPERFAMILY SSF46785 10 80 1.34E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 Pfam PF01614 Bacterial transcriptional regulator 127 249 1.0E-34 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 SMART SM00346 8 98 1.6E-7 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 Gene3D G3DSA:3.30.450.40 84 253 1.8E-51 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A3618 b6aeb6f37571bf7fc0ffb83019784f39 254 Pfam PF09339 IclR helix-turn-helix domain 10 61 1.7E-10 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A0429 9d4e90c37fc00e28194b74e59e1831dc 291 Pfam PF01136 Peptidase family U32 82 256 1.4E-13 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VIBNI_B0401 4fa928020ba28502de66b0224bbd9075 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 38 289 1.2E-52 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B0401 4fa928020ba28502de66b0224bbd9075 331 Gene3D G3DSA:3.40.190.170 33 331 1.3E-83 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B0401 4fa928020ba28502de66b0224bbd9075 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 313 1.9E-67 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0852 fa4acc0da88b81dd22ac35fb908a82ef 172 Pfam PF01467 Cytidylyltransferase-like 5 142 1.3E-10 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_B0852 fa4acc0da88b81dd22ac35fb908a82ef 172 SUPERFAMILY SSF52374 1 171 1.27E-30 T 15-10-2018 VIBNI_B0852 fa4acc0da88b81dd22ac35fb908a82ef 172 Gene3D G3DSA:3.40.50.620 1 172 4.2E-50 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Pfam PF00072 Response regulator receiver domain 8 117 8.3E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 SMART SM00448 6 117 6.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 SUPERFAMILY SSF52172 4 187 4.13E-33 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 411 1.4E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Gene3D G3DSA:3.40.50.300 140 287 7.5E-28 T 15-10-2018 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 SUPERFAMILY SSF52540 141 349 2.28E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Pfam PF14532 Sigma-54 interaction domain 143 288 7.7E-15 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 SUPERFAMILY SSF46689 362 414 2.33E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Gene3D G3DSA:1.10.10.60 354 418 1.1E-11 T 15-10-2018 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Gene3D G3DSA:1.10.8.60 288 349 3.2E-17 T 15-10-2018 VIBNI_B1111 d6fe233ed6244afccb82b56e7db2a24c 422 Gene3D G3DSA:3.40.50.2300 2 133 2.1E-32 T 15-10-2018 VIBNI_A0432 cbb2bb988151263c35847a60037caad7 175 Pfam PF02036 SCP-2 sterol transfer family 37 134 8.3E-19 T 15-10-2018 IPR003033 SCP2 sterol-binding domain VIBNI_A0432 cbb2bb988151263c35847a60037caad7 175 PIRSF PIRSF025550 1 174 4.2E-80 T 15-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VIBNI_A0432 cbb2bb988151263c35847a60037caad7 175 Gene3D G3DSA:3.30.1050.10 18 138 3.7E-7 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VIBNI_A0432 cbb2bb988151263c35847a60037caad7 175 SUPERFAMILY SSF55718 32 140 5.65E-21 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VIBNI_B0768 7e15dc6532fbf5618f056bdad1aeb9b6 507 Pfam PF00171 Aldehyde dehydrogenase family 13 460 1.6E-49 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B0768 7e15dc6532fbf5618f056bdad1aeb9b6 507 Gene3D G3DSA:3.40.605.10 44 504 3.5E-171 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0768 7e15dc6532fbf5618f056bdad1aeb9b6 507 Gene3D G3DSA:3.40.309.10 267 458 3.5E-171 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B0768 7e15dc6532fbf5618f056bdad1aeb9b6 507 SUPERFAMILY SSF53720 18 503 3.4E-89 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 SMART SM01060 6 390 1.0E-285 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PIRSF PIRSF038928 1 480 4.3E-222 T 15-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 15-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 Gene3D G3DSA:2.40.180.10 1 479 1.1E-230 T 15-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 15-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 Pfam PF06628 Catalase-related immune-responsive 415 473 1.9E-21 T 15-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 82 100 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 103 120 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 319 345 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 287 314 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 19 42 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 PRINTS PR00067 Catalase signature 122 140 2.6E-73 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 Pfam PF00199 Catalase 6 385 3.8E-190 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_B0104 b4d5db772330889da0bed3dae7ffa59f 480 SUPERFAMILY SSF56634 4 475 3.93E-214 T 15-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_A3846 48a9f20c806ee646a3b4628a3e3d0297 200 Gene3D G3DSA:3.40.30.10 17 200 1.4E-54 T 15-10-2018 VIBNI_A3846 48a9f20c806ee646a3b4628a3e3d0297 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_A3846 48a9f20c806ee646a3b4628a3e3d0297 200 SUPERFAMILY SSF52833 20 198 1.17E-46 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A3846 48a9f20c806ee646a3b4628a3e3d0297 200 PIRSF PIRSF001488 1 200 5.5E-71 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VIBNI_A3846 48a9f20c806ee646a3b4628a3e3d0297 200 Pfam PF01323 DSBA-like thioredoxin domain 40 188 5.5E-27 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 7.4E-61 T 15-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 SUPERFAMILY SSF47616 80 216 7.91E-41 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 9.4E-13 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 215 3.2E-44 T 15-10-2018 IPR007494 Glutaredoxin 2, C-terminal VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 SUPERFAMILY SSF52833 1 77 4.19E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 Gene3D G3DSA:1.20.1050.10 95 216 6.8E-39 T 15-10-2018 VIBNI_B1893 c95b2a0445c776f23c957495588c202d 216 Gene3D G3DSA:3.40.30.10 8 83 2.8E-29 T 15-10-2018 VIBNI_A3187 f573f742d36a4768e73d157e3826fe50 118 Gene3D G3DSA:3.40.1260.10 1 118 2.5E-37 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_A3187 f573f742d36a4768e73d157e3826fe50 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 4.5E-44 T 15-10-2018 IPR017462 Sulphur relay, TusC/DsrF VIBNI_A3187 f573f742d36a4768e73d157e3826fe50 118 SUPERFAMILY SSF75169 2 118 5.23E-37 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_A3187 f573f742d36a4768e73d157e3826fe50 118 Pfam PF02635 DsrE/DsrF-like family 4 118 4.2E-25 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VIBNI_A3874 f09094d447006237036cde193d31e027 287 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 210 286 4.5E-18 T 15-10-2018 IPR006260 TonB/TolA, C-terminal VIBNI_A3874 f09094d447006237036cde193d31e027 287 Gene3D G3DSA:3.30.1150.10 164 287 5.7E-32 T 15-10-2018 VIBNI_A3874 f09094d447006237036cde193d31e027 287 SUPERFAMILY SSF74653 185 286 3.79E-18 T 15-10-2018 VIBNI_A3874 f09094d447006237036cde193d31e027 287 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 209 286 1.1E-16 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 VIBNI_A3874 f09094d447006237036cde193d31e027 287 PRINTS PR01374 Gram-negative bacterial tonB protein signature 225 243 8.8E-7 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A3874 f09094d447006237036cde193d31e027 287 PRINTS PR01374 Gram-negative bacterial tonB protein signature 130 140 8.8E-7 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A3874 f09094d447006237036cde193d31e027 287 PRINTS PR01374 Gram-negative bacterial tonB protein signature 204 225 8.8E-7 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 SMART SM00895 114 250 1.5E-13 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 Gene3D G3DSA:1.10.10.10 11 87 4.2E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 SMART SM00345 26 85 7.7E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 Pfam PF07729 FCD domain 114 249 9.3E-16 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 SUPERFAMILY SSF48008 112 253 5.75E-16 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 3.0E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 3.0E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 6.1E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 SUPERFAMILY SSF46785 19 89 8.61E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1758 c1cdf0640c43ae00178f4be3133e90d8 264 Gene3D G3DSA:1.20.120.530 112 260 7.3E-17 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 SMART SM00387 417 527 5.1E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 SMART SM00388 305 371 4.6E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 Gene3D G3DSA:3.30.565.10 380 525 6.2E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 SUPERFAMILY SSF55874 382 527 4.85E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 Gene3D G3DSA:1.10.287.130 256 371 1.8E-20 T 15-10-2018 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 SUPERFAMILY SSF47384 290 368 9.61E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 523 1.1E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 Pfam PF00512 His Kinase A (phospho-acceptor) domain 307 367 6.0E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 SMART SM00304 252 304 0.0015 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 9.0E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 9.0E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A0837 6ec9b4248b0e2de4d79bc0e9d3774b4d 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 9.0E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 PRINTS PR00207 Flagellin signature 111 134 3.2E-25 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 PRINTS PR00207 Flagellin signature 37 54 3.2E-25 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 PRINTS PR00207 Flagellin signature 76 95 3.2E-25 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.2E-42 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Gene3D G3DSA:3.30.70.2120 174 279 2.9E-76 T 15-10-2018 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Pfam PF07196 Flagellin hook IN motif 197 248 9.0E-8 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Pfam PF00700 Bacterial flagellin C-terminal helical region 295 380 1.8E-25 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 SUPERFAMILY SSF64518 1 381 6.28E-98 T 15-10-2018 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Gene3D G3DSA:1.10.8.410 332 381 3.1E-21 T 15-10-2018 VIBNI_A2630 a90281276aa3539e57248ce7eb38ddde 381 Gene3D G3DSA:1.20.1330.10 44 331 2.9E-76 T 15-10-2018 VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.539 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 Gene3D G3DSA:3.40.50.150 1 206 5.3E-75 T 15-10-2018 VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 SUPERFAMILY SSF53335 16 204 3.22E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.0E-82 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VIBNI_A0135 b4f0eec7da6fb2155b8906feeebc117d 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 204 2.3E-72 T 15-10-2018 VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 587 33.445 T 15-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 SUPERFAMILY SSF56935 29 587 5.86E-111 T 15-10-2018 VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 6.5E-27 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 Pfam PF00593 TonB dependent receptor 199 586 2.6E-47 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 15-10-2018 IPR010916 TonB box, conserved site VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 Gene3D G3DSA:2.170.130.10 24 153 5.4E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_A3350 47ad937b0c74086013cf1e8123f36357 587 Gene3D G3DSA:2.40.170.20 155 587 4.0E-117 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 SUPERFAMILY SSF55120 8 339 7.77E-96 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.469 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 1.9E-42 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 337 7.5E-21 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 Gene3D G3DSA:3.30.2350.20 19 337 6.5E-108 T 15-10-2018 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 Gene3D G3DSA:3.30.2340.10 170 302 6.5E-108 T 15-10-2018 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 15-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VIBNI_A0133 628180f1d421d3b467aec3b65e7c54f6 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 8 273 1.9E-55 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82866 796 1022 1.06E-49 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.2090.10 185 275 1.9E-258 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Pfam PF00873 AcrB/AcrD/AcrF family 15 1021 6.2E-161 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82693 51 143 1.05E-17 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82866 298 493 1.44E-35 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:1.20.1640.10 507 1018 1.9E-258 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.70.1430 564 662 1.9E-258 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.70.1440 663 861 1.9E-258 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.2090.10 713 800 1.9E-258 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.70.1430 51 808 1.9E-258 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:3.30.70.1320 144 332 1.9E-258 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82714 190 271 6.02E-14 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 2.6E-22 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82693 148 330 2.62E-10 T 15-10-2018 VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 SUPERFAMILY SSF82714 724 797 4.45E-7 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1353 73b9aea7445227abdac36ac6e174de33 1050 Gene3D G3DSA:1.20.1640.10 21 506 1.9E-258 T 15-10-2018 VIBNI_A1015 ea3c1c8f306312a34cebd724888482d9 155 SUPERFAMILY SSF55729 1 144 8.11E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1015 ea3c1c8f306312a34cebd724888482d9 155 Gene3D G3DSA:3.40.630.30 1 155 1.4E-18 T 15-10-2018 VIBNI_A1015 ea3c1c8f306312a34cebd724888482d9 155 Pfam PF00583 Acetyltransferase (GNAT) family 43 133 5.1E-8 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 SUPERFAMILY SSF48452 54 227 1.04E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 1.7E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 SUPERFAMILY SSF55073 374 525 1.33E-35 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 SMART SM00267 358 526 2.7E-32 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 Gene3D G3DSA:3.30.70.270 356 525 1.1E-42 T 15-10-2018 VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 5.4E-32 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 Gene3D G3DSA:1.25.40.10 32 347 6.7E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1758 e5d63278264b05f7d7ba4e35001074f0 527 SUPERFAMILY SSF48452 203 315 2.88E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 SUPERFAMILY SSF52374 1 281 1.26E-106 T 15-10-2018 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.4E-107 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 8.8E-101 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.656 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 2.9E-9 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 Gene3D G3DSA:3.40.50.620 1 179 5.0E-79 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2852 79f38225f95d764ee4383f980d4957ad 295 Gene3D G3DSA:3.30.1300.10 181 283 5.5E-28 T 15-10-2018 VIBNI_A0611 8886a3a5ac7b4d157a3584f2a6b8a5f5 328 SUPERFAMILY SSF51735 1 326 7.37E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0611 8886a3a5ac7b4d157a3584f2a6b8a5f5 328 Gene3D G3DSA:3.40.50.720 1 327 6.4E-70 T 15-10-2018 VIBNI_A0611 8886a3a5ac7b4d157a3584f2a6b8a5f5 328 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 250 3.8E-36 T 15-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 VIBNI_A0877 bb75564a4b9d9c3f20d493b568d82747 327 Pfam PF00676 Dehydrogenase E1 component 19 316 1.5E-100 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VIBNI_A0877 bb75564a4b9d9c3f20d493b568d82747 327 Gene3D G3DSA:3.40.50.970 1 327 1.9E-120 T 15-10-2018 VIBNI_A0877 bb75564a4b9d9c3f20d493b568d82747 327 SUPERFAMILY SSF52518 6 326 1.16E-100 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B0715 f11d3a9bab6dc856bc70395d5d52c847 288 SUPERFAMILY SSF51658 15 272 3.8E-47 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_B0715 f11d3a9bab6dc856bc70395d5d52c847 288 Gene3D G3DSA:3.20.20.150 2 279 5.0E-65 T 15-10-2018 VIBNI_B0715 f11d3a9bab6dc856bc70395d5d52c847 288 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 272 3.1E-92 T 15-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VIBNI_B0715 f11d3a9bab6dc856bc70395d5d52c847 288 Pfam PF01261 Xylose isomerase-like TIM barrel 25 233 5.7E-38 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 SUPERFAMILY SSF63829 9 276 2.26E-45 T 15-10-2018 VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 252 1.4E-49 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 88 109 2.1E-7 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 2.1E-7 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 131 153 2.1E-7 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) VIBNI_B2111 aef481bb88cede3054a901d2424cd8c6 301 Gene3D G3DSA:2.120.10.30 1 284 1.3E-66 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 Gene3D G3DSA:3.30.479.30 190 314 9.7E-27 T 15-10-2018 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 PRINTS PR00721 Stomatin signature 332 355 1.7E-15 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 PRINTS PR00721 Stomatin signature 244 261 1.7E-15 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 PRINTS PR00721 Stomatin signature 288 306 1.7E-15 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 PRINTS PR00721 Stomatin signature 209 230 1.7E-15 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 PRINTS PR00721 Stomatin signature 307 328 1.7E-15 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 Pfam PF01145 SPFH domain / Band 7 family 158 328 6.6E-22 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 SUPERFAMILY SSF117892 192 318 4.84E-27 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily VIBNI_A1841 37a329db2c2c5b4c2cca55966ad6ea7c 384 SMART SM00244 151 312 1.7E-19 T 15-10-2018 IPR001107 Band 7 domain VIBNI_B0467 e0c07d5530f7f3378080c498f219f8e4 146 Gene3D G3DSA:3.30.530.20 1 146 8.6E-42 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_B0467 e0c07d5530f7f3378080c498f219f8e4 146 SUPERFAMILY SSF55961 1 140 6.68E-26 T 15-10-2018 VIBNI_B0467 e0c07d5530f7f3378080c498f219f8e4 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 129 4.7E-11 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VIBNI_B0946 76ee641a7e2b83e8774ac3dd5aaa0b34 235 Pfam PF01066 CDP-alcohol phosphatidyltransferase 32 107 2.0E-7 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_B0946 76ee641a7e2b83e8774ac3dd5aaa0b34 235 Gene3D G3DSA:1.20.120.1760 13 217 1.8E-31 T 15-10-2018 VIBNI_A2168 b839545b8f6da0a021dc6f88a0994b53 204 Pfam PF02361 Cobalt transport protein 12 199 1.2E-7 T 15-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VIBNI_A1724 6caef1a2aac34691136ce344a068395a 245 Gene3D G3DSA:3.40.50.1220 8 225 2.9E-80 T 15-10-2018 VIBNI_A1724 6caef1a2aac34691136ce344a068395a 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.616 T 15-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VIBNI_A1724 6caef1a2aac34691136ce344a068395a 245 Pfam PF02146 Sir2 family 13 186 2.4E-50 T 15-10-2018 IPR003000 Sirtuin family GO:0070403 VIBNI_A1724 6caef1a2aac34691136ce344a068395a 245 Gene3D G3DSA:3.30.1600.10 22 158 2.9E-80 T 15-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VIBNI_A1724 6caef1a2aac34691136ce344a068395a 245 SUPERFAMILY SSF52467 6 235 2.7E-72 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 SUPERFAMILY SSF52540 538 849 1.99E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Gene3D G3DSA:3.40.50.300 561 863 6.3E-120 T 15-10-2018 VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Pfam PF09397 Ftsk gamma domain 883 943 7.0E-26 T 15-10-2018 IPR018541 FtsK gamma domain VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Pfam PF01580 FtsK/SpoIIIE family 564 777 4.5E-71 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 SMART SM00843 881 946 4.8E-39 T 15-10-2018 IPR018541 FtsK gamma domain VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Gene3D G3DSA:1.10.10.10 885 948 1.1E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 SUPERFAMILY SSF46785 881 945 3.88E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Gene3D G3DSA:3.30.980.40 456 560 1.3E-32 T 15-10-2018 VIBNI_A2323 0f8551eda5f3a28ade320962374f9055 949 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 9.3E-40 T 15-10-2018 IPR025199 DNA translocase FtsK, 4TM region VIBNI_A1908 ccdac750da57e20b6f290064bf0bbf00 448 Gene3D G3DSA:3.40.190.10 167 427 1.3E-96 T 15-10-2018 VIBNI_A1908 ccdac750da57e20b6f290064bf0bbf00 448 Gene3D G3DSA:3.40.190.10 51 389 1.3E-96 T 15-10-2018 VIBNI_A1908 ccdac750da57e20b6f290064bf0bbf00 448 SUPERFAMILY SSF53850 35 438 2.03E-65 T 15-10-2018 VIBNI_A1908 ccdac750da57e20b6f290064bf0bbf00 448 Pfam PF01547 Bacterial extracellular solute-binding protein 51 351 7.2E-36 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A3021 4209467a085a8c4c8ad91693d0945d93 238 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 118 205 3.0E-12 T 15-10-2018 IPR032871 AHH domain-containing protein VIBNI_B0499 fb61b9f097c7ab38dadb8a66a0804c15 162 SUPERFAMILY SSF55729 12 147 8.72E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0499 fb61b9f097c7ab38dadb8a66a0804c15 162 Pfam PF13673 Acetyltransferase (GNAT) domain 50 139 8.3E-10 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0499 fb61b9f097c7ab38dadb8a66a0804c15 162 Gene3D G3DSA:3.40.630.30 5 151 6.0E-15 T 15-10-2018 VIBNI_A0627 d01c630164b03119d3645816352b7dc4 294 Pfam PF01513 ATP-NAD kinase 8 273 1.8E-70 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VIBNI_A0627 d01c630164b03119d3645816352b7dc4 294 SUPERFAMILY SSF111331 8 290 5.89E-93 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VIBNI_A0627 d01c630164b03119d3645816352b7dc4 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.905 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VIBNI_A0627 d01c630164b03119d3645816352b7dc4 294 Gene3D G3DSA:3.40.50.10330 23 289 9.7E-93 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VIBNI_A0627 d01c630164b03119d3645816352b7dc4 294 Gene3D G3DSA:2.60.200.30 129 266 9.7E-93 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.1E-32 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 Pfam PF08281 Sigma-70, region 4 134 181 3.8E-18 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 SUPERFAMILY SSF88946 2 107 1.38E-32 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 SUPERFAMILY SSF88659 124 185 2.06E-17 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 Gene3D G3DSA:1.10.1740.10 1 121 1.1E-45 T 15-10-2018 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 Pfam PF04542 Sigma-70 region 2 26 92 8.3E-18 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 Gene3D G3DSA:1.10.10.10 122 192 8.5E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0108 962c4bd1b223f252dcf966cc41530477 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 5.2E-103 T 15-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Gene3D G3DSA:3.90.320.10 910 1207 9.9E-99 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Pfam PF12705 PD-(D/E)XK nuclease superfamily 976 1187 8.5E-7 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Gene3D G3DSA:1.10.486.10 599 748 1.5E-151 T 15-10-2018 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 449 4.9E-61 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Gene3D G3DSA:3.40.50.300 15 448 1.8E-156 T 15-10-2018 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 SUPERFAMILY SSF52540 9 841 5.19E-112 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 15 1200 0.0 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 SUPERFAMILY SSF52980 922 1202 2.2E-82 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Pfam PF13361 UvrD-like helicase C-terminal domain 455 829 1.0E-16 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 13 1201 22.673 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Gene3D G3DSA:1.10.3170.10 169 361 1.8E-156 T 15-10-2018 VIBNI_A0546 585aea325feb652f1f1bdb7478df0b89 1209 Gene3D G3DSA:3.40.50.300 457 865 1.5E-151 T 15-10-2018 VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 Gene3D G3DSA:3.20.20.450 142 390 1.8E-66 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 SUPERFAMILY SSF52172 3 180 9.39E-17 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 SUPERFAMILY SSF141868 144 388 1.57E-64 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 Pfam PF00072 Response regulator receiver domain 7 96 1.9E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 Pfam PF00563 EAL domain 145 375 6.0E-58 T 15-10-2018 IPR001633 EAL domain VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 SMART SM00052 138 380 4.9E-53 T 15-10-2018 IPR001633 EAL domain VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 Gene3D G3DSA:3.40.50.2300 3 138 1.8E-17 T 15-10-2018 VIBNI_A1600 c02cbe78a4405928caa1d0d790b5dbc7 393 SMART SM00448 5 124 3.7E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 Gene3D G3DSA:3.40.50.2300 9 131 7.4E-23 T 15-10-2018 VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 SUPERFAMILY SSF141868 150 396 9.29E-81 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 SMART SM00052 143 388 6.6E-92 T 15-10-2018 IPR001633 EAL domain VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 Pfam PF00072 Response regulator receiver domain 11 127 3.2E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 SUPERFAMILY SSF52172 8 128 1.04E-19 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 Gene3D G3DSA:3.20.20.450 147 403 1.4E-84 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 SMART SM00448 9 128 8.6E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2460 4bc6e32106c1fd6c85cff0363d335693 407 Pfam PF00563 EAL domain 150 383 1.3E-69 T 15-10-2018 IPR001633 EAL domain VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Gene3D G3DSA:3.40.50.880 441 672 1.5E-74 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Gene3D G3DSA:2.60.40.10 76 180 2.6E-183 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 SUPERFAMILY SSF52317 480 665 1.28E-22 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Pfam PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain 9 439 8.5E-181 T 15-10-2018 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 6 726 0.0 T 15-10-2018 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase GO:0004645 VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 674 726 3.9E-13 T 15-10-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Pfam PF17385 Lacto-N-biose phosphorylase central domain 444 667 1.9E-77 T 15-10-2018 IPR035363 Lacto-N-biose phosphorylase, central domain VIBNI_B0675 45657557d949f426d87021f974ff71ed 727 Gene3D G3DSA:3.20.20.80 9 432 2.6E-183 T 15-10-2018 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 5.0E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 5.0E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 Gene3D G3DSA:3.40.1410.10 70 229 1.0E-32 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 SMART SM00866 86 225 7.6E-26 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 SMART SM00345 6 65 1.7E-20 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.8E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 Pfam PF07702 UTRA domain 88 224 3.6E-30 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 Gene3D G3DSA:1.10.10.10 2 69 1.7E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 SUPERFAMILY SSF46785 3 69 9.85E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0184 dce02faedf20625f35d43a8ec65e2380 234 SUPERFAMILY SSF64288 53 229 3.77E-36 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A3643 eb68e4a27d0d979336a67205ceb04cec 186 SUPERFAMILY SSF51182 1 181 3.74E-78 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A3643 eb68e4a27d0d979336a67205ceb04cec 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 3.9E-74 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VIBNI_A3643 eb68e4a27d0d979336a67205ceb04cec 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 170 3.0E-84 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VIBNI_A3643 eb68e4a27d0d979336a67205ceb04cec 186 Gene3D G3DSA:2.60.120.10 1 185 2.2E-74 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A3643 eb68e4a27d0d979336a67205ceb04cec 186 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 9.6E-83 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 SUPERFAMILY SSF52943 2 288 4.05E-96 T 15-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 3.4E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 3.4E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 Pfam PF00231 ATP synthase 5 287 1.4E-97 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 Gene3D G3DSA:3.40.1380.10 61 207 7.8E-111 T 15-10-2018 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 Gene3D G3DSA:1.10.287.80 6 284 7.8E-111 T 15-10-2018 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.7E-111 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.725 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3862 30d89715f2d78d7584107514257aa6e2 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 15-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3222 0520d288b88b9681f8e8388b80bcf925 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 133 3.5E-42 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VIBNI_A3222 0520d288b88b9681f8e8388b80bcf925 154 SUPERFAMILY SSF52540 1 138 1.39E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3222 0520d288b88b9681f8e8388b80bcf925 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 5.7E-52 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VIBNI_A3222 0520d288b88b9681f8e8388b80bcf925 154 Gene3D G3DSA:3.40.50.300 2 153 1.1E-48 T 15-10-2018 VIBNI_A1969 9856a7b6132d674d19ffd3234570485a 404 SUPERFAMILY SSF56796 29 397 9.03E-109 T 15-10-2018 VIBNI_A1969 9856a7b6132d674d19ffd3234570485a 404 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 279 299 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A1969 9856a7b6132d674d19ffd3234570485a 404 Gene3D G3DSA:1.20.1090.10 205 400 1.9E-56 T 15-10-2018 VIBNI_A1969 9856a7b6132d674d19ffd3234570485a 404 Pfam PF00465 Iron-containing alcohol dehydrogenase 30 392 3.6E-109 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_A1969 9856a7b6132d674d19ffd3234570485a 404 Gene3D G3DSA:3.40.50.1970 15 203 3.6E-52 T 15-10-2018 VIBNI_B1724 8429e59077e28b8ac8b0bacebecfcad5 330 PIRSF PIRSF002825 4 326 2.5E-69 T 15-10-2018 IPR026045 Ferric binding protein VIBNI_B1724 8429e59077e28b8ac8b0bacebecfcad5 330 Pfam PF13343 Bacterial extracellular solute-binding protein 77 308 5.7E-30 T 15-10-2018 VIBNI_B1724 8429e59077e28b8ac8b0bacebecfcad5 330 Gene3D G3DSA:3.40.190.10 127 310 3.7E-74 T 15-10-2018 VIBNI_B1724 8429e59077e28b8ac8b0bacebecfcad5 330 SUPERFAMILY SSF53850 30 323 2.22E-64 T 15-10-2018 VIBNI_B1724 8429e59077e28b8ac8b0bacebecfcad5 330 Gene3D G3DSA:3.40.190.10 32 295 3.7E-74 T 15-10-2018 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 SUPERFAMILY SSF52540 4 242 1.31E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 Gene3D G3DSA:2.40.50.140 289 345 6.2E-31 T 15-10-2018 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 Pfam PF00005 ABC transporter 20 161 4.6E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 Gene3D G3DSA:2.40.50.940 222 354 6.2E-31 T 15-10-2018 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 SUPERFAMILY SSF50331 236 357 5.78E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 Gene3D G3DSA:3.40.50.300 3 221 5.4E-64 T 15-10-2018 VIBNI_B1384 c17b81c749d6b09ac232ef5349ab0bdd 363 SMART SM00382 28 219 4.4E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 1.1E-128 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 7.0E-102 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 SUPERFAMILY SSF47648 1 67 1.01E-19 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 Gene3D G3DSA:1.20.970.10 10 183 2.1E-122 T 15-10-2018 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 Gene3D G3DSA:3.40.1030.10 67 321 2.1E-122 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 SUPERFAMILY SSF52418 70 330 2.09E-92 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 2.9E-18 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_A1274 c77bd8549942a5c01258ead74499eda8 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.803 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.6E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.6E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.6E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.6E-36 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.3E-59 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 Pfam PF00459 Inositol monophosphatase family 2 259 4.2E-69 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 Gene3D G3DSA:3.40.190.80 143 267 5.5E-38 T 15-10-2018 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 SUPERFAMILY SSF56655 1 259 6.15E-84 T 15-10-2018 VIBNI_A2790 9f97f95fc7b066cafa2b06e4469b3ccc 267 Gene3D G3DSA:3.30.540.10 1 140 1.5E-50 T 15-10-2018 VIBNI_A3847 f34e0c26b8e7eea8d73a93fbbbb3e48e 294 Pfam PF01553 Acyltransferase 72 226 4.4E-14 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A3847 f34e0c26b8e7eea8d73a93fbbbb3e48e 294 SUPERFAMILY SSF69593 21 284 6.67E-29 T 15-10-2018 VIBNI_A3847 f34e0c26b8e7eea8d73a93fbbbb3e48e 294 SMART SM00563 85 227 7.2E-17 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 8.7E-13 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 Gene3D G3DSA:3.40.50.2300 69 313 1.5E-52 T 15-10-2018 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 SUPERFAMILY SSF47413 6 63 2.07E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 SUPERFAMILY SSF53822 66 316 1.73E-46 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 Pfam PF13377 Periplasmic binding protein-like domain 176 333 3.6E-20 T 15-10-2018 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 SMART SM00354 7 77 1.3E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 Gene3D G3DSA:1.10.260.40 3 64 9.7E-17 T 15-10-2018 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 Gene3D G3DSA:3.40.50.2300 165 294 1.5E-52 T 15-10-2018 VIBNI_A0788 a20449116429a0c53eae73851b46894a 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 15-10-2018 VIBNI_A0229 16655670979438a73da91232020ec277 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 351 34.894 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0229 16655670979438a73da91232020ec277 354 Gene3D G3DSA:3.40.50.2000 8 160 5.2E-118 T 15-10-2018 VIBNI_A0229 16655670979438a73da91232020ec277 354 SUPERFAMILY SSF53756 5 351 4.81E-126 T 15-10-2018 VIBNI_A0229 16655670979438a73da91232020ec277 354 Gene3D G3DSA:3.40.50.2000 161 317 5.2E-118 T 15-10-2018 VIBNI_A0229 16655670979438a73da91232020ec277 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.9E-47 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0229 16655670979438a73da91232020ec277 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 9.3E-118 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0229 16655670979438a73da91232020ec277 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 340 1.9E-37 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VIBNI_B1620 7fba7bf85e7ac629c0ed652205ec1b5f 178 SUPERFAMILY SSF142984 106 142 3.92E-5 T 15-10-2018 VIBNI_B1620 7fba7bf85e7ac629c0ed652205ec1b5f 178 Gene3D G3DSA:3.30.1950.10 32 104 2.8E-23 T 15-10-2018 VIBNI_B1620 7fba7bf85e7ac629c0ed652205ec1b5f 178 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 99 6.7E-20 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VIBNI_B1620 7fba7bf85e7ac629c0ed652205ec1b5f 178 Gene3D G3DSA:3.10.560.10 26 162 2.8E-23 T 15-10-2018 VIBNI_B1620 7fba7bf85e7ac629c0ed652205ec1b5f 178 Pfam PF10531 SLBB domain 106 153 1.7E-15 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.358 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 Pfam PF00436 Single-strand binding protein family 3 89 3.7E-8 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 97 2.5E-33 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 PIRSF PIRSF003135 1 100 1.8E-44 T 15-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 SUPERFAMILY SSF50249 1 98 1.65E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3551 891a2cc325186cf61b5a2846751906ee 100 Gene3D G3DSA:2.40.50.140 1 100 1.4E-31 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 SUPERFAMILY SSF55021 383 476 5.56E-22 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Gene3D G3DSA:3.40.50.720 467 811 1.4E-119 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.7E-133 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Gene3D G3DSA:3.30.2130.10 302 464 1.8E-45 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Gene3D G3DSA:3.30.360.10 625 795 1.4E-119 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 PIRSF PIRSF000727 1 817 0.0 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 SUPERFAMILY SSF55347 614 797 1.18E-49 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.3E-46 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 SUPERFAMILY SSF51735 463 636 2.94E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Pfam PF01842 ACT domain 324 378 2.9E-9 T 15-10-2018 IPR002912 ACT domain VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.9E-27 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 SUPERFAMILY SSF55021 303 381 3.93E-22 T 15-10-2018 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 SUPERFAMILY SSF53633 1 298 6.9E-77 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Pfam PF00696 Amino acid kinase family 2 284 3.7E-51 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Gene3D G3DSA:3.40.1160.10 3 295 2.5E-87 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Pfam PF13840 ACT domain 395 456 7.8E-7 T 15-10-2018 IPR027795 CASTOR, ACT domain VIBNI_A0288 feba6a7467b7bd4ae338e29516803a32 819 Gene3D G3DSA:1.20.120.1320 41 142 2.5E-87 T 15-10-2018 VIBNI_B0416 8a8c8a9f4e82554681b483617ec9a57c 468 Pfam PF01547 Bacterial extracellular solute-binding protein 46 357 5.8E-26 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0416 8a8c8a9f4e82554681b483617ec9a57c 468 SUPERFAMILY SSF53850 27 447 5.13E-62 T 15-10-2018 VIBNI_B0416 8a8c8a9f4e82554681b483617ec9a57c 468 Gene3D G3DSA:3.40.190.10 47 400 2.2E-75 T 15-10-2018 VIBNI_B0416 8a8c8a9f4e82554681b483617ec9a57c 468 Gene3D G3DSA:3.40.190.10 146 439 2.2E-75 T 15-10-2018 VIBNI_A1913 7b7c4ee1a7b7de652d3adf511faa9223 189 Gene3D G3DSA:3.30.1330.60 60 186 2.2E-22 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1913 7b7c4ee1a7b7de652d3adf511faa9223 189 SUPERFAMILY SSF103088 74 187 2.75E-20 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1913 7b7c4ee1a7b7de652d3adf511faa9223 189 Pfam PF00691 OmpA family 89 177 3.0E-15 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.1E-15 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.2E-230 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Gene3D G3DSA:2.40.30.10 206 334 1.4E-51 T 15-10-2018 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Gene3D G3DSA:2.40.30.10 338 393 1.2E-29 T 15-10-2018 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 3.5E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 SUPERFAMILY SSF50465 302 394 3.74E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Gene3D G3DSA:3.40.50.300 1 203 1.8E-70 T 15-10-2018 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.496 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 SUPERFAMILY SSF52540 6 219 9.2E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 SUPERFAMILY SSF50447 205 301 1.75E-28 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_A3334 b0e313002d1e1f7d1a3e8c4b71173299 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 SUPERFAMILY SSF52540 5 262 7.88E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Pfam PF00005 ABC transporter 26 191 1.4E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Pfam PF00005 ABC transporter 318 476 5.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 SUPERFAMILY SSF52540 308 547 7.38E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Gene3D G3DSA:3.40.50.300 291 564 2.2E-77 T 15-10-2018 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Gene3D G3DSA:3.40.50.300 3 290 3.8E-79 T 15-10-2018 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 SMART SM00382 34 241 1.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 SMART SM00382 326 524 1.1E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 285 3.8E-6 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1703 ea8bb48757e99b08e95d4fcdd5d1cc18 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 558 1.2E-4 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 9.1E-19 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 Pfam PF01197 Ribosomal protein L31 1 79 6.0E-28 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.751 T 15-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.4E-16 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.4E-16 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 Gene3D G3DSA:2.30.170.50 1 84 9.7E-25 T 15-10-2018 VIBNI_A0602 9af4969d68b26a8b7c49dd34e7407b65 91 SUPERFAMILY SSF143800 1 81 8.63E-24 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2200 342e91a026054f8f403cc1ada94ad842 159 SUPERFAMILY SSF55729 1 153 2.23E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2200 342e91a026054f8f403cc1ada94ad842 159 Pfam PF00583 Acetyltransferase (GNAT) family 21 136 3.5E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2200 342e91a026054f8f403cc1ada94ad842 159 Gene3D G3DSA:3.40.630.30 1 159 1.2E-34 T 15-10-2018 VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 Gene3D G3DSA:3.40.1280.10 74 243 7.0E-66 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 SUPERFAMILY SSF75217 75 242 1.99E-51 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 PIRSF PIRSF015601 2 242 1.1E-53 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 SUPERFAMILY SSF88697 2 70 1.09E-16 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.7E-85 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 Gene3D G3DSA:2.40.240.20 1 70 8.9E-21 T 15-10-2018 VIBNI_A0062 b88b88c7bbfd67428951e2b3263e61ad 243 Pfam PF04452 RNA methyltransferase 18 236 8.3E-74 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VIBNI_A3320 8d82f11354c83247f8004cdf735014b1 308 Gene3D G3DSA:3.40.50.720 33 300 2.2E-88 T 15-10-2018 VIBNI_A3320 8d82f11354c83247f8004cdf735014b1 308 SUPERFAMILY SSF52283 52 105 7.4E-5 T 15-10-2018 VIBNI_A3320 8d82f11354c83247f8004cdf735014b1 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 273 2.0E-42 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A3320 8d82f11354c83247f8004cdf735014b1 308 Gene3D G3DSA:3.40.50.720 92 277 2.2E-88 T 15-10-2018 VIBNI_A3320 8d82f11354c83247f8004cdf735014b1 308 SUPERFAMILY SSF51735 94 274 1.97E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 Pfam PF03466 LysR substrate binding domain 88 289 5.7E-33 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 7.7E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 SUPERFAMILY SSF46785 8 86 1.03E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 SUPERFAMILY SSF53850 87 293 9.62E-35 T 15-10-2018 VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 Gene3D G3DSA:3.40.190.290 91 288 4.4E-44 T 15-10-2018 VIBNI_B2026 37fb3ef88ed38549579e20a3789e3121 296 Gene3D G3DSA:1.10.10.10 4 89 3.4E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 SUPERFAMILY SSF51230 3 125 1.16E-43 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 Pfam PF01597 Glycine cleavage H-protein 5 125 4.9E-49 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 39.312 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 Gene3D G3DSA:2.40.50.100 1 126 8.8E-49 T 15-10-2018 VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_B0815 35454bfbe04580054693b51585ac3731 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.6E-50 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VIBNI_B0529 69567fa3bdd4a90f722523d138725b7f 372 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 127 7.3E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_B0529 69567fa3bdd4a90f722523d138725b7f 372 SUPERFAMILY SSF51735 3 153 3.94E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0529 69567fa3bdd4a90f722523d138725b7f 372 Gene3D G3DSA:3.30.360.10 141 364 9.0E-6 T 15-10-2018 VIBNI_B0529 69567fa3bdd4a90f722523d138725b7f 372 Gene3D G3DSA:3.40.50.720 2 140 1.9E-33 T 15-10-2018 VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 PIRSF PIRSF006188 1 72 1.9E-34 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.27 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 Gene3D G3DSA:1.10.3390.10 1 75 2.2E-32 T 15-10-2018 IPR023202 YejL-like superfamily VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-26 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 Pfam PF07208 Protein of unknown function (DUF1414) 28 69 6.1E-21 T 15-10-2018 IPR009857 Uncharacterised protein family UPF0352 VIBNI_A0881 576ec121d6d7a5b21e23eaeaa15bf373 75 SUPERFAMILY SSF158651 1 73 5.76E-30 T 15-10-2018 IPR023202 YejL-like superfamily VIBNI_A0938 c6b3832956d1a62a7dfc8a577250246c 286 SUPERFAMILY SSF54637 5 114 2.19E-38 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A0938 c6b3832956d1a62a7dfc8a577250246c 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.4E-93 T 15-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VIBNI_A0938 c6b3832956d1a62a7dfc8a577250246c 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.1E-56 T 15-10-2018 VIBNI_A0938 c6b3832956d1a62a7dfc8a577250246c 286 Gene3D G3DSA:3.10.129.90 2 286 2.4E-103 T 15-10-2018 VIBNI_A0938 c6b3832956d1a62a7dfc8a577250246c 286 SUPERFAMILY SSF54637 116 283 6.03E-56 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 Gene3D G3DSA:3.40.50.20 1 81 6.5E-20 T 15-10-2018 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.019 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 Gene3D G3DSA:3.30.1490.20 102 162 1.4E-19 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 SUPERFAMILY SSF52440 1 88 1.73E-16 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 Pfam PF02222 ATP-grasp domain 101 274 8.2E-52 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 Gene3D G3DSA:3.30.470.20 163 374 3.0E-73 T 15-10-2018 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 349 5.2E-110 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 SUPERFAMILY SSF56059 92 294 5.13E-56 T 15-10-2018 VIBNI_A3831 dff12f179733a9e95adff4583d235615 375 SUPERFAMILY SSF51246 298 365 2.67E-18 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VIBNI_A3797 9e4971b22811be82a9a05a970a9bd002 221 Hamap MF_02088 Probable queuosine precursor transporter. 7 213 15.603 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VIBNI_A3797 9e4971b22811be82a9a05a970a9bd002 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 204 1.2E-61 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VIBNI_A3797 9e4971b22811be82a9a05a970a9bd002 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.5E-37 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VIBNI_A3381 ffecce6f308b710417df361d072b9879 129 Gene3D G3DSA:3.10.290.10 2 107 3.7E-37 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A3381 ffecce6f308b710417df361d072b9879 129 Pfam PF01479 S4 domain 8 54 7.5E-13 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3381 ffecce6f308b710417df361d072b9879 129 PIRSF PIRSF016821 5 129 2.4E-42 T 15-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VIBNI_A3381 ffecce6f308b710417df361d072b9879 129 SUPERFAMILY SSF55174 6 103 2.09E-31 T 15-10-2018 VIBNI_A3381 ffecce6f308b710417df361d072b9879 129 SMART SM00363 8 71 1.5E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 Pfam PF00576 HIUase/Transthyretin family 4 116 4.0E-36 T 15-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 PRINTS PR00189 Transthyretin signature 3 23 9.1E-8 T 15-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 PRINTS PR00189 Transthyretin signature 95 117 9.1E-8 T 15-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 Gene3D G3DSA:2.60.40.180 1 117 2.5E-41 T 15-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 15-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 15-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 6.4E-41 T 15-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VIBNI_B1438 be7e5a709e982480f32bfaa8d4dd4eba 117 SUPERFAMILY SSF49472 1 117 9.42E-41 T 15-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 1.3E-197 T 15-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 Gene3D G3DSA:3.90.1150.10 249 386 8.8E-51 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 Gene3D G3DSA:3.40.640.10 3 248 3.3E-83 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.5E-135 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 SUPERFAMILY SSF53383 8 382 1.53E-117 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3600 2b73457c954d2cd9d6f19ef654193170 388 PIRSF PIRSF001434 1 385 1.8E-133 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 PRINTS PR00160 Glutaredoxin signature 108 126 1.3E-6 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 PRINTS PR00160 Glutaredoxin signature 171 184 1.3E-6 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 PRINTS PR00160 Glutaredoxin signature 157 170 1.3E-6 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 SUPERFAMILY SSF52833 109 189 1.64E-18 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 Pfam PF00462 Glutaredoxin 109 174 8.8E-17 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_B1529 05ce7fb3b01928863ed7804e14d28762 205 Gene3D G3DSA:3.40.30.10 109 185 2.1E-19 T 15-10-2018 VIBNI_B0635 06473c20382c57a20ca58f2a3028b635 312 Gene3D G3DSA:3.60.10.10 3 312 1.5E-27 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B0635 06473c20382c57a20ca58f2a3028b635 312 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 43 303 9.6E-8 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VIBNI_B0635 06473c20382c57a20ca58f2a3028b635 312 SUPERFAMILY SSF56219 4 311 5.4E-30 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 219 3.5E-25 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 9.6E-46 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Gene3D G3DSA:2.40.110.10 124 236 2.5E-39 T 15-10-2018 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 PIRSF PIRSF016578 227 386 6.4E-8 T 15-10-2018 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 PIRSF PIRSF016578 10 196 1.4E-9 T 15-10-2018 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 SUPERFAMILY SSF47203 229 381 7.25E-53 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Gene3D G3DSA:1.10.540.10 10 121 1.1E-31 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 120 2.4E-27 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 Gene3D G3DSA:1.20.140.10 237 385 2.6E-50 T 15-10-2018 VIBNI_B0452 a18cbc6045dbf83d1d53e39ca61ea21f 386 SUPERFAMILY SSF56645 13 244 2.09E-71 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VIBNI_B1009 5dcf005c360b7c4f3280af78b5717c92 274 SUPERFAMILY SSF161098 9 274 6.92E-58 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1009 5dcf005c360b7c4f3280af78b5717c92 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 264 7.9E-8 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1009 5dcf005c360b7c4f3280af78b5717c92 274 Gene3D G3DSA:1.10.3720.10 5 266 3.9E-54 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3578 65de5db0e8193e5cd83788ec6870fcdc 507 Pfam PF05036 Sporulation related domain 420 493 4.1E-7 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_A3578 65de5db0e8193e5cd83788ec6870fcdc 507 SUPERFAMILY SSF52540 15 221 3.14E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3578 65de5db0e8193e5cd83788ec6870fcdc 507 Pfam PF13401 AAA domain 31 147 1.2E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3578 65de5db0e8193e5cd83788ec6870fcdc 507 Gene3D G3DSA:3.40.50.300 8 167 1.3E-7 T 15-10-2018 VIBNI_A3578 65de5db0e8193e5cd83788ec6870fcdc 507 Gene3D G3DSA:3.30.70.1070 405 504 1.9E-25 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.61 T 15-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 4.9E-125 T 15-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 4.8E-47 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 SUPERFAMILY SSF52374 340 471 6.76E-23 T 15-10-2018 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 SUPERFAMILY SSF53613 12 303 3.59E-59 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.6E-18 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 Pfam PF01467 Cytidylyltransferase-like 345 469 5.8E-14 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 Gene3D G3DSA:3.40.1190.20 6 310 5.3E-112 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 Gene3D G3DSA:3.40.50.620 323 475 5.8E-37 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0195 19f345d4c0fc5e49feb54b947de19b32 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 9.4E-61 T 15-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VIBNI_A0411 46e182269e8e8f85bda4e1b216a07aaa 547 SUPERFAMILY SSF161098 258 528 6.28E-36 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0411 46e182269e8e8f85bda4e1b216a07aaa 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 314 528 3.3E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0411 46e182269e8e8f85bda4e1b216a07aaa 547 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 278 538 1.1E-73 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VIBNI_A0411 46e182269e8e8f85bda4e1b216a07aaa 547 Gene3D G3DSA:1.10.3720.10 278 539 2.7E-30 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 6.5E-36 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 Gene3D G3DSA:3.30.930.10 107 434 1.2E-112 T 15-10-2018 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 SUPERFAMILY SSF55681 118 429 1.94E-97 T 15-10-2018 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 3.1E-173 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.7E-29 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.115 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PIRSF PIRSF001529 1 435 1.8E-185 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 Gene3D G3DSA:1.10.287.40 1 106 1.2E-20 T 15-10-2018 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VIBNI_A2320 99f019c528a14236759b0fb0d6079a9e 435 SUPERFAMILY SSF46589 1 114 8.89E-29 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VIBNI_B0306 a361bea051b2b2b1d13a876b37ab917c 256 Pfam PF07090 Putative glutamine amidotransferase 6 250 1.2E-110 T 15-10-2018 IPR010768 Putative glutamine amidotransferase VIBNI_B0306 a361bea051b2b2b1d13a876b37ab917c 256 SUPERFAMILY SSF52317 6 250 9.38E-63 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0306 a361bea051b2b2b1d13a876b37ab917c 256 PIRSF PIRSF034405 1 253 1.2E-100 T 15-10-2018 IPR017027 Uncharacterised conserved protein UCP034405 VIBNI_B0306 a361bea051b2b2b1d13a876b37ab917c 256 Gene3D G3DSA:3.40.50.880 1 251 1.3E-93 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3747 3cf7417e35e609a54176400ca0ca7479 339 Pfam PF01757 Acyltransferase family 7 329 9.2E-31 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 SUPERFAMILY SSF69318 404 614 1.31E-18 T 15-10-2018 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Gene3D G3DSA:3.90.930.1 980 1129 4.4E-9 T 15-10-2018 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Gene3D G3DSA:3.90.930.1 1232 1377 5.2E-6 T 15-10-2018 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 27 203 2.9E-13 T 15-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2054 2147 1.0E-18 T 15-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1088 1122 3.9E-8 T 15-10-2018 IPR006530 YD repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1326 1354 4.8E-4 T 15-10-2018 IPR006530 YD repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1076 1107 2.4E-6 T 15-10-2018 IPR006530 YD repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Pfam PF05593 RHS Repeat 1326 1352 7.4E-7 T 15-10-2018 IPR031325 RHS repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Pfam PF05593 RHS Repeat 1088 1123 1.9E-10 T 15-10-2018 IPR031325 RHS repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Pfam PF05593 RHS Repeat 1076 1103 1.8E-5 T 15-10-2018 IPR031325 RHS repeat VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 505 569 1.3E-6 T 15-10-2018 VIBNI_B2021 49a83568c554a2e4351d6c070de52d95 2450 Gene3D G3DSA:2.180.10.10 1711 2148 2.1E-34 T 15-10-2018 VIBNI_A1172 748b930808877cf2448f47d1dc72eb8d 432 Pfam PF13449 Esterase-like activity of phytase 82 404 6.0E-54 T 15-10-2018 IPR027372 Phytase-like domain VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 474 8.0E-204 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 SUPERFAMILY SSF53720 9 478 1.14E-164 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 Gene3D G3DSA:3.40.309.10 260 448 1.1E-176 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 Gene3D G3DSA:3.40.605.10 19 471 1.1E-176 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B1924 b49ece9fec02f7f43ddd6c429f7df6cb 481 Pfam PF00171 Aldehyde dehydrogenase family 19 475 9.9E-168 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 SMART SM01119 308 404 7.1E-34 T 15-10-2018 IPR026956 D-serine dehydratase-like domain VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 Gene3D G3DSA:3.20.20.10 46 278 9.2E-136 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 Pfam PF14031 Putative serine dehydratase domain 308 402 1.4E-14 T 15-10-2018 IPR026956 D-serine dehydratase-like domain VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 Gene3D G3DSA:2.40.37.20 29 417 9.2E-136 T 15-10-2018 VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 SUPERFAMILY SSF51419 43 279 2.45E-33 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A3115 a0da6e4d898b08d43207e6373d563f14 417 Pfam PF01168 Alanine racemase, N-terminal domain 43 274 2.1E-16 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 SMART SM00357 6 69 2.7E-28 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 3.1E-28 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 Gene3D G3DSA:2.40.50.140 1 69 3.6E-27 T 15-10-2018 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 PRINTS PR00050 Cold shock protein signature 7 22 4.0E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 PRINTS PR00050 Cold shock protein signature 42 60 4.0E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 PRINTS PR00050 Cold shock protein signature 27 36 4.0E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 PIRSF PIRSF002599 1 69 8.5E-24 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 SUPERFAMILY SSF50249 5 68 6.46E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_B0380 aff6e0b2d7645c2586b9c5e431ab2e2d 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 15-10-2018 IPR019844 Cold-shock conserved site VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 Gene3D G3DSA:1.10.287.950 307 638 1.8E-75 T 15-10-2018 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 Pfam PF00672 HAMP domain 308 357 3.8E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 Gene3D G3DSA:3.30.450.20 164 283 2.5E-17 T 15-10-2018 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 SUPERFAMILY SSF58104 329 638 1.7E-77 T 15-10-2018 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 Pfam PF02743 Cache domain 51 269 1.0E-11 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 SMART SM00304 307 361 6.8E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 SMART SM00283 376 637 2.0E-81 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1635 545ee84f72100c5bd6cef770c04fea49 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 604 9.0E-43 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0866 5873fdd3711c4f9d735fed2bdaf8c4c4 401 Gene3D G3DSA:3.40.630.30 1 81 1.5E-13 T 15-10-2018 VIBNI_A0866 5873fdd3711c4f9d735fed2bdaf8c4c4 401 Gene3D G3DSA:3.90.79.10 93 222 1.7E-30 T 15-10-2018 VIBNI_A0866 5873fdd3711c4f9d735fed2bdaf8c4c4 401 Pfam PF00293 NUDIX domain 92 210 3.2E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A0866 5873fdd3711c4f9d735fed2bdaf8c4c4 401 SUPERFAMILY SSF55811 88 220 2.71E-27 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 Gene3D G3DSA:1.20.1540.10 94 272 3.3E-51 T 15-10-2018 IPR035952 Rhomboid-like superfamily VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 SUPERFAMILY SSF144091 96 270 2.22E-39 T 15-10-2018 VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 Gene3D G3DSA:3.30.70.2350 1 70 1.6E-17 T 15-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 8.9E-110 T 15-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 Pfam PF01694 Rhomboid family 134 270 3.6E-30 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VIBNI_A3733 82d8b20a9b92e363f2571d8c5be9e68d 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 2 87 1.9E-24 T 15-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VIBNI_A0070 389853a5991196f89745fd6eb4cfb6d7 280 Gene3D G3DSA:3.40.50.1400 12 118 4.2E-26 T 15-10-2018 VIBNI_A0070 389853a5991196f89745fd6eb4cfb6d7 280 Gene3D G3DSA:3.40.50.1400 119 228 4.2E-26 T 15-10-2018 VIBNI_A0070 389853a5991196f89745fd6eb4cfb6d7 280 SUPERFAMILY SSF53800 11 268 5.01E-38 T 15-10-2018 VIBNI_A0070 389853a5991196f89745fd6eb4cfb6d7 280 Pfam PF06180 Cobalt chelatase (CbiK) 12 228 9.1E-18 T 15-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 Gene3D G3DSA:3.40.50.720 109 297 1.2E-107 T 15-10-2018 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 SUPERFAMILY SSF55021 334 408 9.16E-19 T 15-10-2018 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 SUPERFAMILY SSF52283 8 136 1.89E-48 T 15-10-2018 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 Gene3D G3DSA:3.30.70.260 328 408 1.7E-33 T 15-10-2018 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 2.2E-37 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 Gene3D G3DSA:3.40.50.720 14 312 1.2E-107 T 15-10-2018 VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 SUPERFAMILY SSF51735 108 295 1.92E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A0091 f156b2cde42594dee46515d87e742311 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.1E-51 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.6E-95 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 Gene3D G3DSA:3.20.20.105 1 370 6.7E-172 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.234 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 SUPERFAMILY SSF51713 3 366 2.88E-163 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 2.1E-187 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A0425 e029078e69f9d378bcd113ab4569d5bc 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 6.1E-178 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VIBNI_A1123 7a859ead640c0070c307a75b76f700c5 1217 Gene3D G3DSA:3.40.390.10 454 673 2.9E-7 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_A1123 7a859ead640c0070c307a75b76f700c5 1217 SUPERFAMILY SSF55486 309 672 9.61E-16 T 15-10-2018 VIBNI_A1123 7a859ead640c0070c307a75b76f700c5 1217 Pfam PF16313 Met-zincin 603 674 1.1E-8 T 15-10-2018 IPR032534 Domain of unknown function DUF4953 VIBNI_B1691 652dbae83de6dcf1838f74e09971bc1b 177 SUPERFAMILY SSF52499 2 169 1.7E-41 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_B1691 652dbae83de6dcf1838f74e09971bc1b 177 Pfam PF00857 Isochorismatase family 3 145 5.0E-35 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 VIBNI_B1691 652dbae83de6dcf1838f74e09971bc1b 177 Gene3D G3DSA:3.40.50.850 1 176 1.2E-43 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1114 1177 6.2E-14 T 15-10-2018 VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 Pfam PF13476 AAA domain 5 264 7.6E-24 T 15-10-2018 IPR038729 Rad50/SbcC-type AAA domain VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 Gene3D G3DSA:3.40.50.300 1 282 2.3E-43 T 15-10-2018 VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 SUPERFAMILY SSF52540 26 1195 7.28E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 Gene3D G3DSA:3.40.50.300 1012 1216 1.5E-26 T 15-10-2018 VIBNI_B1598 7e5a13e68574c1fb620bd84dea712f23 1224 SUPERFAMILY SSF52540 965 1210 3.1E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0992 dafb7b909a240489d75d82ef3e22bc08 171 Gene3D G3DSA:3.40.50.300 1 151 1.9E-8 T 15-10-2018 VIBNI_A0992 dafb7b909a240489d75d82ef3e22bc08 171 SUPERFAMILY SSF52540 1 100 1.03E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 Gene3D G3DSA:3.30.70.360 210 323 7.3E-127 T 15-10-2018 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 PIRSF PIRSF001235 1 409 9.8E-121 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 SUPERFAMILY SSF53187 9 401 2.71E-72 T 15-10-2018 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 20 400 1.8E-105 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 Pfam PF07687 Peptidase dimerisation domain 211 309 2.7E-6 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 Gene3D G3DSA:3.40.630.10 20 399 7.3E-127 T 15-10-2018 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 Pfam PF01546 Peptidase family M20/M25/M40 74 401 1.4E-21 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_B0566 0223cde4a510494f1f7dcaefc8a84ffe 410 SUPERFAMILY SSF55031 210 320 1.24E-23 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_B0661 b76d91f1ea9c4eb0d0b6321947102f43 191 Gene3D G3DSA:3.40.50.360 1 191 9.5E-44 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0661 b76d91f1ea9c4eb0d0b6321947102f43 191 SUPERFAMILY SSF52218 1 190 1.71E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0661 b76d91f1ea9c4eb0d0b6321947102f43 191 Pfam PF02525 Flavodoxin-like fold 2 182 1.3E-33 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 SMART SM01240 7 344 5.3E-140 T 15-10-2018 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.994 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.3E-185 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 SUPERFAMILY SSF51412 6 336 9.55E-99 T 15-10-2018 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 PIRSF PIRSF000235 1 347 6.7E-195 T 15-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.5E-80 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VIBNI_B1235 994a4e78322a0c806024e523d9a316db 347 Gene3D G3DSA:3.20.20.70 1 345 1.9E-116 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 300 5.4E-132 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 SUPERFAMILY SSF53784 3 311 2.22E-113 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 Gene3D G3DSA:3.40.50.450 4 287 1.7E-117 T 15-10-2018 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 15-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 Gene3D G3DSA:3.40.50.460 143 252 1.7E-117 T 15-10-2018 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 Pfam PF00365 Phosphofructokinase 4 276 5.0E-110 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 4.7E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.355 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VIBNI_A3252 a723ca9de3e3ffabd764fcf27908d3f8 320 PIRSF PIRSF000532 1 320 9.9E-129 T 15-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VIBNI_B0628 9de581a1fee535d654d32bbaf0c793a3 353 Gene3D G3DSA:1.10.3470.10 27 353 1.3E-82 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0628 9de581a1fee535d654d32bbaf0c793a3 353 SUPERFAMILY SSF81345 22 349 3.66E-66 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0628 9de581a1fee535d654d32bbaf0c793a3 353 Pfam PF01032 FecCD transport family 41 349 3.5E-75 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.031 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.4E-34 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.4E-34 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.4E-34 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.4E-34 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.4E-34 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 1.6E-39 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 SUPERFAMILY SSF47323 642 899 1.87E-68 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Gene3D G3DSA:3.90.740.10 198 357 3.0E-48 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 SUPERFAMILY SSF50677 191 365 2.49E-58 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 SUPERFAMILY SSF52374 1 641 5.16E-136 T 15-10-2018 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 1.3E-18 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 2.6E-226 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Gene3D G3DSA:3.40.50.620 358 577 6.1E-58 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Gene3D G3DSA:3.40.50.620 2 197 6.2E-57 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 SUPERFAMILY SSF46589 885 949 6.28E-18 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Gene3D G3DSA:1.10.287.380 878 950 3.0E-19 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VIBNI_A2966 feda897a5880cd411dee9ade8d994d99 952 Gene3D G3DSA:1.10.730.10 578 818 6.0E-71 T 15-10-2018 VIBNI_A1412 cbb6f7fa9e71181fd8575609ed380449 174 Gene3D G3DSA:3.40.50.300 1 162 2.9E-12 T 15-10-2018 VIBNI_A1412 cbb6f7fa9e71181fd8575609ed380449 174 SUPERFAMILY SSF52540 6 132 1.78E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1649 fc33f09078630ad64abe20968f47bfcb 490 Pfam PF13884 Chaperone of endosialidase 422 466 6.1E-6 T 15-10-2018 IPR030392 Intramolecular chaperone auto-processing domain VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 59 1.9E-6 T 15-10-2018 IPR027379 Cardiolipin synthase N-terminal VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Gene3D G3DSA:3.30.870.10 118 299 1.4E-37 T 15-10-2018 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 48.637 T 15-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Pfam PF13091 PLD-like domain 135 268 1.3E-15 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Pfam PF13091 PLD-like domain 327 444 1.5E-25 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 SMART SM00155 219 246 2.9E-6 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 SMART SM00155 397 424 7.7E-5 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 SUPERFAMILY SSF56024 70 313 3.53E-51 T 15-10-2018 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 SUPERFAMILY SSF56024 273 470 1.02E-45 T 15-10-2018 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 Gene3D G3DSA:3.30.870.10 300 478 3.1E-29 T 15-10-2018 VIBNI_A1369 e281d014387b3ca555ed84df55cb9e4e 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 13 484 6.6E-150 T 15-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VIBNI_A0111 63f79e1e6354e717f518984966c2d1cb 167 PIRSF PIRSF004923 1 158 6.0E-37 T 15-10-2018 IPR026268 Protein RseC VIBNI_A0111 63f79e1e6354e717f518984966c2d1cb 167 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 148 2.9E-27 T 15-10-2018 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 15-10-2018 IPR018215 ClpP, Ser active site VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 15-10-2018 IPR033135 ClpP, histidine active site VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.387 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 5.0E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 5.0E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 5.0E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 5.0E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 5.0E-54 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 Pfam PF00574 Clp protease 25 205 4.7E-90 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 Gene3D G3DSA:3.90.226.10 5 207 1.7E-85 T 15-10-2018 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 3.4E-108 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VIBNI_A2428 d2f6eccceaf2974d24b0f98c6206421d 208 SUPERFAMILY SSF52096 23 206 1.74E-75 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 Pfam PF00106 short chain dehydrogenase 2 189 3.9E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 SUPERFAMILY SSF51735 1 232 9.82E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 4.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 4.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0547 9596970c530a6fd718a7899ee90760a7 232 Gene3D G3DSA:3.40.50.720 1 232 1.3E-46 T 15-10-2018 VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 5.3E-5 T 15-10-2018 VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 Gene3D G3DSA:3.40.50.720 1 245 5.6E-91 T 15-10-2018 VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.6E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 2.1E-101 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.7E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.7E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.7E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 SUPERFAMILY SSF51735 5 244 8.84E-89 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.1E-69 T 15-10-2018 VIBNI_A2361 ed65cb524187d023c985c4f8379d416a 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A0782 82460eb8bf6c1eb03762d96d6390c72f 246 SUPERFAMILY SSF52172 58 138 2.07E-5 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0782 82460eb8bf6c1eb03762d96d6390c72f 246 SUPERFAMILY SSF46894 139 242 9.64E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A0782 82460eb8bf6c1eb03762d96d6390c72f 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 241 3.7E-17 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0782 82460eb8bf6c1eb03762d96d6390c72f 246 Gene3D G3DSA:1.10.10.10 135 244 2.1E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0782 82460eb8bf6c1eb03762d96d6390c72f 246 SMART SM00862 167 241 6.7E-16 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0599 44119340c8c47da67db1b6ac138404fa 226 Pfam PF04391 Protein of unknown function (DUF533) 48 224 7.4E-64 T 15-10-2018 IPR007486 Inner membrane protein YebE VIBNI_A0599 44119340c8c47da67db1b6ac138404fa 226 Gene3D G3DSA:1.10.3680.10 105 226 1.0E-9 T 15-10-2018 IPR029024 TerB-like VIBNI_A0599 44119340c8c47da67db1b6ac138404fa 226 SUPERFAMILY SSF158682 82 225 8.37E-25 T 15-10-2018 IPR029024 TerB-like VIBNI_B0262 da87f05e94c547bee9d916c3c0eb2120 313 Pfam PF01758 Sodium Bile acid symporter family 36 214 1.3E-38 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VIBNI_B0262 da87f05e94c547bee9d916c3c0eb2120 313 Gene3D G3DSA:1.20.1530.20 1 306 1.1E-104 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 Gene3D G3DSA:1.10.357.10 1 216 7.6E-61 T 15-10-2018 VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 SUPERFAMILY SSF48498 95 207 7.89E-5 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.8E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.8E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 3.0E-12 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A2907 ee1369890025da3c175d5d246b46880e 220 SUPERFAMILY SSF46689 6 81 1.74E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 SUPERFAMILY SSF103190 64 181 4.32E-11 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 SUPERFAMILY SSF58104 326 635 2.62E-73 T 15-10-2018 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 SMART SM00304 304 358 5.8E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 Gene3D G3DSA:3.30.450.20 65 174 2.7E-40 T 15-10-2018 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 Pfam PF02743 Cache domain 46 265 6.2E-24 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 Gene3D G3DSA:1.10.287.950 304 635 4.7E-67 T 15-10-2018 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 601 1.9E-45 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 Gene3D G3DSA:3.30.450.20 52 278 2.7E-40 T 15-10-2018 VIBNI_B1861 1bb6e1d7bab0a055811db55dd11e2072 635 SMART SM00283 373 634 1.2E-74 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 Gene3D G3DSA:3.30.420.40 208 376 4.2E-102 T 15-10-2018 VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 ProSitePatterns PS01125 ROK family signature. 218 245 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 SUPERFAMILY SSF46785 10 77 3.71E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 SUPERFAMILY SSF53067 86 393 2.21E-54 T 15-10-2018 VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 Gene3D G3DSA:3.30.420.40 91 386 4.2E-102 T 15-10-2018 VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 Gene3D G3DSA:1.10.10.10 2 80 4.8E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2339 a0e67fd17c098f4edaf462b598bb53ee 404 Pfam PF00480 ROK family 88 390 1.7E-67 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 SUPERFAMILY SSF51735 1 333 1.58E-90 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 5.3E-55 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 Gene3D G3DSA:3.40.50.720 1 334 3.5E-100 T 15-10-2018 VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.8E-30 T 15-10-2018 VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.8E-30 T 15-10-2018 VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.8E-30 T 15-10-2018 VIBNI_A3651 6cb0f471c68f6a18fd6ff30f46b05983 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.8E-30 T 15-10-2018 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 421 1.6E-199 T 15-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 PIRSF PIRSF001434 1 422 1.9E-129 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 1.7E-142 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 Gene3D G3DSA:3.40.640.10 1 285 3.7E-101 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 Gene3D G3DSA:3.90.1150.10 289 422 4.9E-52 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 SUPERFAMILY SSF53383 1 421 1.61E-129 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3151 02dc67fd05a12616241d49ab07570dce 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VIBNI_A3734 dd0711813dd2dc1b0eaed86e1aaaed48 106 SMART SM00450 7 102 1.6E-18 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_A3734 dd0711813dd2dc1b0eaed86e1aaaed48 106 SUPERFAMILY SSF52821 2 105 6.16E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A3734 dd0711813dd2dc1b0eaed86e1aaaed48 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.899 T 15-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VIBNI_A3734 dd0711813dd2dc1b0eaed86e1aaaed48 106 Pfam PF00581 Rhodanese-like domain 11 98 7.3E-12 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_A3734 dd0711813dd2dc1b0eaed86e1aaaed48 106 Gene3D G3DSA:3.40.250.10 1 101 1.3E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A1080 84a4d916b87fedc357bffdc062533c81 59 Pfam PF03966 Trm112p-like protein 2 41 1.9E-10 T 15-10-2018 IPR005651 Trm112-like VIBNI_A1080 84a4d916b87fedc357bffdc062533c81 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.894 T 15-10-2018 IPR038053 Uncharacterised protein family UPF0434 VIBNI_A1080 84a4d916b87fedc357bffdc062533c81 59 SUPERFAMILY SSF158997 1 54 3.01E-20 T 15-10-2018 VIBNI_A1080 84a4d916b87fedc357bffdc062533c81 59 Gene3D G3DSA:2.20.25.10 8 59 1.2E-24 T 15-10-2018 VIBNI_A0420 ab6534fb29178ba29a820eac3b047aab 181 Gene3D G3DSA:1.10.10.10 2 103 1.6E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0420 ab6534fb29178ba29a820eac3b047aab 181 SUPERFAMILY SSF46785 6 179 1.2E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0420 ab6534fb29178ba29a820eac3b047aab 181 Pfam PF03551 Transcriptional regulator PadR-like family 9 85 8.5E-7 T 15-10-2018 IPR005149 Transcription regulator PadR, N-terminal VIBNI_B0953 4c7fe9bd68f146db465aaf83423c0617 258 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 10 222 2.0E-14 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VIBNI_B0953 4c7fe9bd68f146db465aaf83423c0617 258 Gene3D G3DSA:3.60.21.10 6 245 5.4E-22 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B0953 4c7fe9bd68f146db465aaf83423c0617 258 SUPERFAMILY SSF56300 7 247 1.82E-32 T 15-10-2018 VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.87 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 SUPERFAMILY SSF54211 3 126 2.2E-42 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.9E-107 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 Gene3D G3DSA:3.30.230.20 1 128 1.3E-51 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 1.3E-139 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 SUPERFAMILY SSF54211 134 278 1.52E-50 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0234 cbbcba8a198a7ee6e6c3fa76d9940b44 305 Gene3D G3DSA:3.30.1700.10 129 305 3.9E-69 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VIBNI_B0638 22879f6cd1b98b27505eac28969d724c 330 SUPERFAMILY SSF53850 21 323 1.47E-68 T 15-10-2018 VIBNI_B0638 22879f6cd1b98b27505eac28969d724c 330 Gene3D G3DSA:3.40.190.10 245 330 2.6E-7 T 15-10-2018 VIBNI_B0638 22879f6cd1b98b27505eac28969d724c 330 Gene3D G3DSA:3.40.190.100 112 244 1.1E-26 T 15-10-2018 VIBNI_B0638 22879f6cd1b98b27505eac28969d724c 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 309 1.3E-61 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VIBNI_B2124 ea684a7fc49c6ddb8589c5b489992cf8 271 Gene3D G3DSA:3.20.20.450 28 269 2.0E-44 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B2124 ea684a7fc49c6ddb8589c5b489992cf8 271 SUPERFAMILY SSF141868 34 262 1.06E-43 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B2124 ea684a7fc49c6ddb8589c5b489992cf8 271 Pfam PF00563 EAL domain 33 254 2.1E-38 T 15-10-2018 IPR001633 EAL domain VIBNI_B2124 ea684a7fc49c6ddb8589c5b489992cf8 271 SMART SM00052 4 259 5.1E-12 T 15-10-2018 IPR001633 EAL domain VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 15-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 Pfam PF00119 ATP synthase A chain 44 262 4.3E-58 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 1.6E-13 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 1.6E-13 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 1.6E-13 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 Gene3D G3DSA:1.20.120.220 92 268 6.6E-67 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 SUPERFAMILY SSF81336 93 262 6.8E-50 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.204 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3867 e0b0af8394b1b30189a028f0a56267f9 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 6.7E-45 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.1E-141 T 15-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 2.3E-134 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 Gene3D G3DSA:3.40.50.1100 12 306 1.1E-124 T 15-10-2018 VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 299 3.2E-68 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 SUPERFAMILY SSF53686 4 309 2.49E-95 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A2625 09586f0b1571e68a22b60ee645da181a 322 Gene3D G3DSA:3.40.50.1100 43 145 1.1E-124 T 15-10-2018 VIBNI_B0077 b927df2e9dbcec1415e602114c7909a2 256 SMART SM00382 28 214 7.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0077 b927df2e9dbcec1415e602114c7909a2 256 Pfam PF00005 ABC transporter 25 166 2.2E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0077 b927df2e9dbcec1415e602114c7909a2 256 Gene3D G3DSA:3.40.50.300 2 255 1.1E-63 T 15-10-2018 VIBNI_B0077 b927df2e9dbcec1415e602114c7909a2 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0077 b927df2e9dbcec1415e602114c7909a2 256 SUPERFAMILY SSF52540 3 227 5.01E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2421 bc8c56a529914509f39c6e604f8ccfff 106 SUPERFAMILY SSF47781 24 106 2.22E-28 T 15-10-2018 IPR010994 RuvA domain 2-like VIBNI_A2421 bc8c56a529914509f39c6e604f8ccfff 106 Pfam PF12836 Helix-hairpin-helix motif 44 104 4.6E-22 T 15-10-2018 VIBNI_A2421 bc8c56a529914509f39c6e604f8ccfff 106 Gene3D G3DSA:1.10.150.280 32 106 4.3E-21 T 15-10-2018 VIBNI_A2421 bc8c56a529914509f39c6e604f8ccfff 106 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 44 106 1.1E-26 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VIBNI_A3038 7f4ddc247055e61c59f6101ace2ecae6 423 Pfam PF00999 Sodium/hydrogen exchanger family 12 416 7.3E-55 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VIBNI_A3658 06d7a299f5a1dd4865669c3363747b78 385 SUPERFAMILY SSF53756 2 278 3.77E-10 T 15-10-2018 VIBNI_A3658 06d7a299f5a1dd4865669c3363747b78 385 Gene3D G3DSA:3.40.50.2000 163 266 5.7E-9 T 15-10-2018 VIBNI_A3658 06d7a299f5a1dd4865669c3363747b78 385 Gene3D G3DSA:3.40.50.2000 26 162 5.7E-9 T 15-10-2018 VIBNI_A0190 62cdb2d86c6b17895a0f8d26072f290e 419 Pfam PF01384 Phosphate transporter family 26 407 1.1E-112 T 15-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VIBNI_A1820 1ab4f0103798ba1a1bffa8c235d75906 438 Pfam PF02321 Outer membrane efflux protein 235 418 4.7E-28 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A1820 1ab4f0103798ba1a1bffa8c235d75906 438 Pfam PF02321 Outer membrane efflux protein 26 214 3.5E-25 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_A1820 1ab4f0103798ba1a1bffa8c235d75906 438 SUPERFAMILY SSF56954 25 432 7.85E-86 T 15-10-2018 VIBNI_A1820 1ab4f0103798ba1a1bffa8c235d75906 438 Gene3D G3DSA:1.20.1600.10 24 434 3.5E-80 T 15-10-2018 VIBNI_A1820 1ab4f0103798ba1a1bffa8c235d75906 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 433 4.6E-118 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 SMART SM00729 24 248 5.1E-42 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 SUPERFAMILY SSF102114 14 256 3.79E-49 T 15-10-2018 VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 8 300 2.5E-133 T 15-10-2018 IPR005911 Protein YhcC-like GO:0051536 VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 Gene3D G3DSA:3.80.30.20 43 276 1.4E-18 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 Pfam PF16199 Radical_SAM C-terminal domain 210 281 3.0E-19 T 15-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VIBNI_A0280 cabbc473886c13e53efb65927b4bab25 312 Pfam PF04055 Radical SAM superfamily 44 203 1.1E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 Pfam PF03600 Citrate transporter 21 518 2.5E-26 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 Pfam PF02080 TrkA-C domain 209 278 4.0E-13 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 Pfam PF02080 TrkA-C domain 293 349 4.6E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 SUPERFAMILY SSF116726 289 349 1.7E-13 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 Gene3D G3DSA:3.30.70.1450 289 359 4.2E-12 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 Gene3D G3DSA:3.30.70.1450 206 285 1.1E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A3134 4c0d4533a287c8d99af7a724c359189a 574 SUPERFAMILY SSF116726 205 283 5.23E-18 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 Gene3D G3DSA:3.40.30.10 1 85 4.9E-24 T 15-10-2018 VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 SUPERFAMILY SSF52833 3 82 5.62E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 Pfam PF00462 Glutaredoxin 3 69 3.7E-17 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 PRINTS PR00160 Glutaredoxin signature 66 79 9.0E-10 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 PRINTS PR00160 Glutaredoxin signature 3 21 9.0E-10 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 PRINTS PR00160 Glutaredoxin signature 52 65 9.0E-10 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.6E-47 T 15-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VIBNI_A1110 aaf83ba0ea955f17f1479fac95bfb933 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_A0161 727216eef13f7b5a1d44ea649da90919 409 Pfam PF07350 Protein of unknown function (DUF1479) 7 409 3.5E-127 T 15-10-2018 IPR010856 Protein of unknown function DUF1479 VIBNI_A0161 727216eef13f7b5a1d44ea649da90919 409 SUPERFAMILY SSF51197 5 409 3.57E-128 T 15-10-2018 VIBNI_A0161 727216eef13f7b5a1d44ea649da90919 409 Gene3D G3DSA:2.60.120.330 1 409 1.4E-148 T 15-10-2018 IPR027443 Isopenicillin N synthase-like VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 SUPERFAMILY SSF50104 1 65 2.17E-10 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 PIRSF PIRSF005901 1 188 1.6E-60 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.4E-92 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 SMART SM00841 132 187 3.3E-25 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Gene3D G3DSA:2.30.30.30 1 64 4.8E-13 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 SUPERFAMILY SSF50249 132 188 5.65E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 6.3E-15 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 SUPERFAMILY SSF50249 67 129 2.44E-12 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.458 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 9.9E-20 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Gene3D G3DSA:2.40.50.140 67 130 1.4E-16 T 15-10-2018 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Gene3D G3DSA:2.40.50.140 131 188 2.0E-20 T 15-10-2018 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 2.6E-14 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VIBNI_A1295 f44679305fa479468665f5ef98e9116f 188 SMART SM01185 69 124 8.2E-15 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VIBNI_A0254 b14b0f5fedcd5b3a4db701371e628f57 344 Gene3D G3DSA:3.40.50.2300 40 298 7.9E-49 T 15-10-2018 VIBNI_A0254 b14b0f5fedcd5b3a4db701371e628f57 344 SUPERFAMILY SSF53822 34 315 4.38E-52 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0254 b14b0f5fedcd5b3a4db701371e628f57 344 Pfam PF13407 Periplasmic binding protein domain 34 251 1.2E-32 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A0254 b14b0f5fedcd5b3a4db701371e628f57 344 Gene3D G3DSA:3.40.50.2300 129 307 7.9E-49 T 15-10-2018 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 Pfam PF12833 Helix-turn-helix domain 180 259 4.7E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 Gene3D G3DSA:1.10.10.60 153 208 6.4E-11 T 15-10-2018 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 SUPERFAMILY SSF46689 161 207 2.64E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 SMART SM00342 174 257 5.4E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 Gene3D G3DSA:1.10.10.60 209 262 4.3E-14 T 15-10-2018 VIBNI_B0037 f0733e06ba80d3faf5dc7333bde505ab 264 SUPERFAMILY SSF46689 211 260 2.33E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.034 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Gene3D G3DSA:3.40.50.670 706 804 7.4E-27 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 SMART SM00387 31 175 8.2E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 7.5E-71 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 SUPERFAMILY SSF56719 395 796 1.15E-87 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 SUPERFAMILY SSF54211 221 393 7.4E-59 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Gene3D G3DSA:3.30.230.10 221 393 1.4E-73 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Gene3D G3DSA:3.40.50.670 399 572 6.3E-75 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 3.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 2.6E-30 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Pfam PF00204 DNA gyrase B 221 391 8.7E-61 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Gene3D G3DSA:3.30.565.10 1 220 1.7E-94 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 Gene3D G3DSA:3.10.20.690 593 684 9.6E-33 T 15-10-2018 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.8E-86 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 SUPERFAMILY SSF55874 4 213 3.27E-75 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0004 e3c244644feaa280ec6690cbc996e5f8 805 SMART SM00433 35 798 3.9E-274 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 SUPERFAMILY SSF53067 198 384 2.36E-44 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Gene3D G3DSA:3.30.1490.110 87 169 4.9E-111 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Gene3D G3DSA:3.30.420.40 197 359 4.9E-111 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Gene3D G3DSA:3.30.420.40 13 379 4.9E-111 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Pfam PF14450 Cell division protein FtsA 207 381 4.5E-24 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 SUPERFAMILY SSF53067 8 221 1.53E-59 T 15-10-2018 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 PIRSF PIRSF003101 1 421 2.1E-146 T 15-10-2018 IPR020823 Cell division protein FtsA VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 421 29.073 T 15-10-2018 IPR020823 Cell division protein FtsA VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 7.7E-28 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.2E-150 T 15-10-2018 IPR020823 Cell division protein FtsA VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 SMART SM00842 10 196 1.8E-95 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VIBNI_A0232 63bcd18d4a58cfc9b562db07b441bd5f 421 Gene3D G3DSA:3.90.640.10 235 300 4.9E-111 T 15-10-2018 VIBNI_A0609 9cfe55223c7cb01f704a626bfd1ea94a 418 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 2 416 2.5E-110 T 15-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related VIBNI_A0609 9cfe55223c7cb01f704a626bfd1ea94a 418 Gene3D G3DSA:3.40.50.12780 7 322 8.7E-31 T 15-10-2018 VIBNI_A0609 9cfe55223c7cb01f704a626bfd1ea94a 418 SUPERFAMILY SSF56801 155 259 3.97E-7 T 15-10-2018 VIBNI_B1187 8775c5bf0863df902b78a96de9d79bea 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 6.9E-142 T 15-10-2018 IPR022602 Protein of unknown function DUF2813 VIBNI_B1187 8775c5bf0863df902b78a96de9d79bea 543 Gene3D G3DSA:3.40.50.300 1 340 3.1E-17 T 15-10-2018 VIBNI_B1187 8775c5bf0863df902b78a96de9d79bea 543 SUPERFAMILY SSF52540 1 325 2.28E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.2E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 SUPERFAMILY SSF51735 4 243 1.97E-84 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 Gene3D G3DSA:3.40.50.720 1 244 9.6E-87 T 15-10-2018 VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 6.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 3.5E-4 T 15-10-2018 VIBNI_A1856 57e93b9651216f897a3ceef9ae982b06 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 3.0E-67 T 15-10-2018 VIBNI_A1315 9cef301357b1400b9fcb9e468e73036a 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 2.2E-78 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VIBNI_A1315 9cef301357b1400b9fcb9e468e73036a 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 4.6E-116 T 15-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VIBNI_A1315 9cef301357b1400b9fcb9e468e73036a 280 Pfam PF01226 Formate/nitrite transporter 13 275 6.6E-76 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VIBNI_A1315 9cef301357b1400b9fcb9e468e73036a 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 15-10-2018 IPR024002 Formate/nitrite transporter, conserved site VIBNI_A1315 9cef301357b1400b9fcb9e468e73036a 280 Gene3D G3DSA:1.20.1080.10 2 267 4.9E-95 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 5.1E-21 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.4E-12 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.4E-12 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.4E-12 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 17.134 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_A0722 2da150f1e9e6d0d7a515b660b592f730 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 2.4E-29 T 15-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VIBNI_B0239 56ee2942a00ac5b14c05bb95b895a1e0 126 Gene3D G3DSA:3.30.720.120 2 49 2.9E-9 T 15-10-2018 VIBNI_B0239 56ee2942a00ac5b14c05bb95b895a1e0 126 SUPERFAMILY SSF54593 2 123 5.23E-15 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0239 56ee2942a00ac5b14c05bb95b895a1e0 126 Gene3D G3DSA:3.30.720.110 72 126 8.7E-9 T 15-10-2018 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 Gene3D G3DSA:1.10.10.10 2 130 2.6E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 Pfam PF12802 MarR family 22 82 3.1E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 75 8.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 8.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 43 59 8.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 129 8.2E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 SUPERFAMILY SSF46785 4 130 3.11E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1220 13e776b5d4136983ee33c3a586707670 139 SMART SM00347 17 119 3.6E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.0E-186 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.043 T 15-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 SUPERFAMILY SSF55347 159 321 5.36E-57 T 15-10-2018 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PIRSF PIRSF000149 1 341 7.2E-126 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 2.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 2.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 2.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 2.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 2.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 SUPERFAMILY SSF51735 2 185 1.94E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 Gene3D G3DSA:3.30.360.10 158 322 3.4E-126 T 15-10-2018 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 2.7E-53 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 SMART SM00846 2 159 3.3E-72 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 Gene3D G3DSA:3.40.50.720 3 332 3.4E-126 T 15-10-2018 VIBNI_A0084 8d853162e1cea7cdbf35dc3dd9182dd0 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 108 7.3E-32 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_B1686 5825d945c336cf0151f1d02fd5659761 427 SUPERFAMILY SSF53850 50 420 2.46E-62 T 15-10-2018 VIBNI_B1686 5825d945c336cf0151f1d02fd5659761 427 Gene3D G3DSA:3.40.190.10 43 427 5.1E-67 T 15-10-2018 VIBNI_B1686 5825d945c336cf0151f1d02fd5659761 427 Pfam PF01547 Bacterial extracellular solute-binding protein 52 342 2.0E-27 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0930 8133331cf5fcf0186e8011a71d65ac3d 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 410 1.4E-52 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0930 8133331cf5fcf0186e8011a71d65ac3d 452 PIRSF PIRSF006603 1 452 6.8E-63 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0930 8133331cf5fcf0186e8011a71d65ac3d 452 Pfam PF01554 MatE 243 401 1.1E-20 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0930 8133331cf5fcf0186e8011a71d65ac3d 452 Pfam PF01554 MatE 22 183 2.5E-20 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 277 7.7E-97 T 15-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 8.7E-12 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 8.7E-12 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 8.7E-12 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 8.7E-12 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 8.7E-12 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 Gene3D G3DSA:3.40.50.620 7 288 3.0E-97 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 Gene3D G3DSA:3.40.50.620 82 225 3.0E-97 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 SUPERFAMILY SSF52374 7 288 1.42E-72 T 15-10-2018 VIBNI_A3390 d7a7accc4f0c1cd08cf9f3fe42951aae 289 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 244 1.9E-41 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VIBNI_B0064 124c34be33cf0006e4009550d3d632f8 356 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 142 290 1.9E-8 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VIBNI_B0064 124c34be33cf0006e4009550d3d632f8 356 Gene3D G3DSA:3.40.50.1110 136 355 7.3E-42 T 15-10-2018 IPR036514 SGNH hydrolase superfamily VIBNI_B0064 124c34be33cf0006e4009550d3d632f8 356 SUPERFAMILY SSF52266 138 352 8.25E-13 T 15-10-2018 VIBNI_B0064 124c34be33cf0006e4009550d3d632f8 356 Gene3D G3DSA:2.60.120.260 12 132 3.4E-21 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A1604 5b95249b9fdfecd152662a42b4ac2d2a 329 Pfam PF09588 YqaJ-like viral recombinase domain 12 161 7.5E-25 T 15-10-2018 IPR019080 YqaJ viral recombinase VIBNI_A1604 5b95249b9fdfecd152662a42b4ac2d2a 329 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 8 172 6.1E-31 T 15-10-2018 IPR017482 Putative phage-type endonuclease VIBNI_A1604 5b95249b9fdfecd152662a42b4ac2d2a 329 Gene3D G3DSA:3.90.320.10 5 207 9.0E-35 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VIBNI_A1604 5b95249b9fdfecd152662a42b4ac2d2a 329 SUPERFAMILY SSF52980 10 209 2.47E-27 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 Gene3D G3DSA:3.40.640.10 22 269 1.3E-142 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 Pfam PF00266 Aminotransferase class-V 13 357 5.5E-36 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 SUPERFAMILY SSF53383 9 371 7.53E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 PIRSF PIRSF000524 5 371 5.7E-109 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VIBNI_A3034 c0855762c6bc7afa3060c3a645edb021 371 Gene3D G3DSA:3.90.1150.10 9 371 1.3E-142 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1680 fdd0ccc5f88756038ab09c2a6ee5be67 436 Gene3D G3DSA:3.40.190.10 41 393 3.1E-140 T 15-10-2018 VIBNI_A1680 fdd0ccc5f88756038ab09c2a6ee5be67 436 SUPERFAMILY SSF53850 22 430 1.57E-76 T 15-10-2018 VIBNI_A1680 fdd0ccc5f88756038ab09c2a6ee5be67 436 Pfam PF01547 Bacterial extracellular solute-binding protein 39 325 1.9E-44 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1680 fdd0ccc5f88756038ab09c2a6ee5be67 436 Gene3D G3DSA:3.40.190.10 137 422 3.1E-140 T 15-10-2018 VIBNI_B0408 85b436176d2975317833833e9551a713 121 Pfam PF12680 SnoaL-like domain 13 116 1.7E-7 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_B0408 85b436176d2975317833833e9551a713 121 PIRSF PIRSF030561 4 121 3.1E-38 T 15-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 VIBNI_B0408 85b436176d2975317833833e9551a713 121 SUPERFAMILY SSF54427 8 119 1.57E-19 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0408 85b436176d2975317833833e9551a713 121 Gene3D G3DSA:3.10.450.50 8 120 2.4E-31 T 15-10-2018 VIBNI_A3288 9c50b605673a041928f762c18f4ee084 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 4.8E-34 T 15-10-2018 IPR019886 Sodium symporter small subunit, predicted VIBNI_A3288 9c50b605673a041928f762c18f4ee084 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.1E-35 T 15-10-2018 IPR019886 Sodium symporter small subunit, predicted VIBNI_B1028 d9642d26729bb1332dc9a58963ed51e8 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 552 9.2E-39 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1028 d9642d26729bb1332dc9a58963ed51e8 587 Gene3D G3DSA:1.10.287.950 251 587 4.0E-64 T 15-10-2018 VIBNI_B1028 d9642d26729bb1332dc9a58963ed51e8 587 SMART SM00283 324 585 2.2E-58 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1028 d9642d26729bb1332dc9a58963ed51e8 587 SUPERFAMILY SSF58104 278 586 1.22E-68 T 15-10-2018 VIBNI_A0846 a590dac492680c791524d158128b2703 616 Gene3D G3DSA:3.40.1750.10 186 497 9.4E-159 T 15-10-2018 VIBNI_A0846 a590dac492680c791524d158128b2703 616 Gene3D G3DSA:3.90.226.10 315 539 9.4E-159 T 15-10-2018 VIBNI_A0846 a590dac492680c791524d158128b2703 616 PIRSF PIRSF001217 8 616 3.6E-222 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VIBNI_A0846 a590dac492680c791524d158128b2703 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.8E-189 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VIBNI_A0846 a590dac492680c791524d158128b2703 616 SUPERFAMILY SSF52096 323 529 9.12E-41 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0846 a590dac492680c791524d158128b2703 616 Gene3D G3DSA:3.90.226.10 94 314 9.4E-159 T 15-10-2018 VIBNI_A0846 a590dac492680c791524d158128b2703 616 Pfam PF01343 Peptidase family S49 138 293 4.7E-31 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VIBNI_A0846 a590dac492680c791524d158128b2703 616 Pfam PF01343 Peptidase family S49 391 541 1.9E-45 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VIBNI_A0846 a590dac492680c791524d158128b2703 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 328 540 8.3E-52 T 15-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VIBNI_A0846 a590dac492680c791524d158128b2703 616 SUPERFAMILY SSF52096 34 284 2.73E-27 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0455 b4d9018ab4335bc1b3366105870a1a77 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 153 2.0E-20 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_A0455 b4d9018ab4335bc1b3366105870a1a77 687 SUPERFAMILY SSF56935 14 687 9.42E-77 T 15-10-2018 VIBNI_A0455 b4d9018ab4335bc1b3366105870a1a77 687 Gene3D G3DSA:2.40.170.20 163 686 1.2E-49 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_A0455 b4d9018ab4335bc1b3366105870a1a77 687 Gene3D G3DSA:2.170.130.10 49 162 8.9E-23 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_A0455 b4d9018ab4335bc1b3366105870a1a77 687 Pfam PF00593 TonB dependent receptor 231 685 1.6E-30 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 SUPERFAMILY SSF52540 60 338 1.15E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Pfam PF16124 RecQ zinc-binding 512 558 6.5E-9 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 349 1.9E-111 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Gene3D G3DSA:3.40.50.300 203 393 7.7E-45 T 15-10-2018 VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Gene3D G3DSA:1.10.10.10 502 640 7.7E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Pfam PF00271 Helicase conserved C-terminal domain 218 325 9.3E-19 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Gene3D G3DSA:3.40.50.300 1 201 9.1E-69 T 15-10-2018 VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 Pfam PF00270 DEAD/DEAH box helicase 22 183 5.5E-18 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 SMART SM00487 15 211 1.7E-26 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 SMART SM00490 245 326 1.9E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A0592 26991ee8b493ee07d328e24bae0b8373 640 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 15-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VIBNI_A1482 04dc23cd33e32e39d20542d052746dc1 405 Gene3D G3DSA:3.40.50.2000 168 352 9.1E-30 T 15-10-2018 VIBNI_A1482 04dc23cd33e32e39d20542d052746dc1 405 Pfam PF00534 Glycosyl transferases group 1 191 345 1.9E-15 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1482 04dc23cd33e32e39d20542d052746dc1 405 Gene3D G3DSA:3.40.50.2000 83 365 9.1E-30 T 15-10-2018 VIBNI_A1482 04dc23cd33e32e39d20542d052746dc1 405 SUPERFAMILY SSF53756 10 365 6.8E-37 T 15-10-2018 VIBNI_B0057 e8826e2bc3f9f6dcae028206407dd56f 217 Pfam PF01613 Flavin reductase like domain 35 167 1.3E-13 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VIBNI_B0057 e8826e2bc3f9f6dcae028206407dd56f 217 Gene3D G3DSA:2.30.110.10 19 193 4.8E-45 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_B0057 e8826e2bc3f9f6dcae028206407dd56f 217 SUPERFAMILY SSF50475 23 196 9.32E-31 T 15-10-2018 VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 Pfam PF13177 DNA polymerase III, delta subunit 9 164 1.0E-42 T 15-10-2018 VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 223 313 6.2E-13 T 15-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 SUPERFAMILY SSF48019 238 314 4.25E-11 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 SUPERFAMILY SSF52540 5 203 3.29E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 3.1E-56 T 15-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2355 4f4f3413168d1487790fd8e4c1ecb0de 319 Gene3D G3DSA:3.40.50.300 3 165 2.2E-46 T 15-10-2018 VIBNI_A1181 cb5c12c4b00e4edf42bff966483bdab2 451 Pfam PF01547 Bacterial extracellular solute-binding protein 67 364 1.2E-17 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1181 cb5c12c4b00e4edf42bff966483bdab2 451 Gene3D G3DSA:3.40.190.10 69 396 7.7E-49 T 15-10-2018 VIBNI_A1181 cb5c12c4b00e4edf42bff966483bdab2 451 Gene3D G3DSA:3.40.190.10 170 432 7.7E-49 T 15-10-2018 VIBNI_A1181 cb5c12c4b00e4edf42bff966483bdab2 451 SUPERFAMILY SSF53850 49 449 2.46E-44 T 15-10-2018 VIBNI_B1673 0cb8adf0dd683d48cd1c64824fc01e08 269 Pfam PF03895 YadA-like membrane anchor domain 209 269 1.5E-9 T 15-10-2018 IPR005594 YadA-like, C-terminal VIBNI_B1673 0cb8adf0dd683d48cd1c64824fc01e08 269 Gene3D G3DSA:3.30.1300.30 164 269 8.7E-19 T 15-10-2018 VIBNI_B1673 0cb8adf0dd683d48cd1c64824fc01e08 269 SUPERFAMILY SSF54523 173 269 1.05E-11 T 15-10-2018 VIBNI_A2824 7252a361edf277ecd58b01c32f0ba389 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 302 4.4E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2824 7252a361edf277ecd58b01c32f0ba389 341 Gene3D G3DSA:1.10.3720.10 93 303 7.4E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2824 7252a361edf277ecd58b01c32f0ba389 341 SUPERFAMILY SSF161098 96 284 3.79E-20 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Gene3D G3DSA:3.40.1190.10 81 312 3.0E-74 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 7.1E-141 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 394 6.3E-14 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.934 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Gene3D G3DSA:3.90.190.20 313 452 1.9E-36 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 SUPERFAMILY SSF53244 314 448 2.26E-34 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Pfam PF08245 Mur ligase middle domain 106 293 1.1E-45 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 SUPERFAMILY SSF63418 1 96 3.66E-25 T 15-10-2018 IPR035911 MurE/MurF, N-terminal VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Gene3D G3DSA:3.40.1390.10 1 80 1.4E-27 T 15-10-2018 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 Pfam PF01225 Mur ligase family, catalytic domain 24 86 5.1E-8 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VIBNI_A0225 c9160c5eb6100dc6becd48091f9ccb7a 452 SUPERFAMILY SSF53623 101 311 1.7E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_A3609 f2de64dacacba76ef3c544ee17001d31 305 PIRSF PIRSF005355 1 302 2.1E-82 T 15-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VIBNI_A3609 f2de64dacacba76ef3c544ee17001d31 305 Pfam PF01040 UbiA prenyltransferase family 25 261 6.3E-37 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VIBNI_A3609 f2de64dacacba76ef3c544ee17001d31 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 21.12 T 15-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VIBNI_A3609 f2de64dacacba76ef3c544ee17001d31 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 2.2E-101 T 15-10-2018 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 Gene3D G3DSA:2.40.50.140 288 335 2.4E-13 T 15-10-2018 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 Pfam PF08402 TOBE domain 285 350 5.1E-5 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 SUPERFAMILY SSF52540 5 251 2.16E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 SMART SM00382 34 226 1.1E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 Gene3D G3DSA:3.40.50.300 1 245 6.3E-59 T 15-10-2018 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 Pfam PF00005 ABC transporter 27 168 2.4E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 Gene3D G3DSA:2.40.50.100 246 287 2.4E-13 T 15-10-2018 VIBNI_B1715 bf9f3d8927965c91efd5a66b72f9dedd 366 SUPERFAMILY SSF50331 243 349 1.53E-15 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1746 dced7a95beede91a8c8964cc6e1b0d9c 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 128 4.0E-47 T 15-10-2018 IPR013559 YheO-like VIBNI_B1746 dced7a95beede91a8c8964cc6e1b0d9c 215 Pfam PF08348 YheO-like PAS domain 14 120 5.9E-34 T 15-10-2018 IPR013559 YheO-like VIBNI_B1746 dced7a95beede91a8c8964cc6e1b0d9c 215 Pfam PF13309 HTH domain 153 210 4.9E-14 T 15-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 Gene3D G3DSA:1.25.40.10 181 296 3.2E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 Pfam PF13432 Tetratricopeptide repeat 294 347 0.0032 T 15-10-2018 VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 Gene3D G3DSA:1.25.40.10 21 180 8.1E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 SUPERFAMILY SSF48452 155 346 4.11E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 SUPERFAMILY SSF48452 58 241 5.18E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0398 f3cee175ef83c399cb6af195fa3c9aa2 401 Gene3D G3DSA:1.25.40.10 297 399 3.4E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 336 576 5.3E-68 T 15-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 48 295 8.5E-31 T 15-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Gene3D G3DSA:2.60.220.10 584 690 1.1E-22 T 15-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 SUPERFAMILY SSF74650 333 587 2.04E-76 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 SUPERFAMILY SSF48230 28 343 2.14E-64 T 15-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Gene3D G3DSA:2.70.98.10 333 583 3.2E-73 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Gene3D G3DSA:1.50.10.100 40 326 2.3E-63 T 15-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 SUPERFAMILY SSF49863 590 688 8.16E-18 T 15-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VIBNI_B0676 fcbf5d2dcbec69c7e1ef2d98917c3c57 859 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 591 652 1.5E-15 T 15-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 VIBNI_A0900 29dd435c03b7a640f0a6e9ed2d3c23b5 317 SUPERFAMILY SSF161098 96 298 1.83E-13 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0900 29dd435c03b7a640f0a6e9ed2d3c23b5 317 Gene3D G3DSA:1.10.3720.10 91 303 5.6E-15 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0900 29dd435c03b7a640f0a6e9ed2d3c23b5 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 8.5E-30 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0236 4390febc70fa407e60a6671b65cb0f17 319 Gene3D G3DSA:2.60.120.10 40 154 8.7E-13 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0236 4390febc70fa407e60a6671b65cb0f17 319 SUPERFAMILY SSF51182 13 304 1.79E-32 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0236 4390febc70fa407e60a6671b65cb0f17 319 Pfam PF07883 Cupin domain 70 129 2.6E-8 T 15-10-2018 IPR013096 Cupin 2, conserved barrel VIBNI_B0236 4390febc70fa407e60a6671b65cb0f17 319 Gene3D G3DSA:2.60.120.10 221 304 2.1E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 Gene3D G3DSA:1.10.10.10 1 90 1.0E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 SUPERFAMILY SSF53850 93 301 8.51E-16 T 15-10-2018 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 Gene3D G3DSA:3.40.190.10 174 275 1.6E-20 T 15-10-2018 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.8E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.0E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 Gene3D G3DSA:3.40.190.10 93 299 1.6E-20 T 15-10-2018 VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 SUPERFAMILY SSF46785 8 88 2.0E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0415 fc234aa933b0a9e04832175bc8362a9e 307 Pfam PF03466 LysR substrate binding domain 97 246 1.5E-9 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 4.5E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 SUPERFAMILY SSF56176 20 274 1.35E-46 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 SUPERFAMILY SSF46548 563 685 1.75E-6 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 Gene3D G3DSA:3.30.70.2740 414 495 7.0E-6 T 15-10-2018 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 SUPERFAMILY SSF55103 252 537 1.36E-52 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 Gene3D G3DSA:3.30.465.40 16 212 2.5E-42 T 15-10-2018 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 Pfam PF01565 FAD binding domain 52 191 6.2E-33 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VIBNI_A1169 c9fa06aeb79fadf4ee01993819a662bc 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 1.9E-61 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VIBNI_B0489 5e13b73b80b65077643d58fbe65c9b06 432 Pfam PF10100 Staphylopine dehydrogenase 7 398 7.4E-122 T 15-10-2018 IPR016935 Staphylopine dehydrogenase VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 SUPERFAMILY SSF52540 33 259 2.72E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 Gene3D G3DSA:3.40.50.300 21 269 1.2E-67 T 15-10-2018 VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 Pfam PF00005 ABC transporter 44 198 2.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 273 2.4E-122 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 ProSitePatterns PS00116 DNA polymerase family B signature. 249 257 - T 15-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A0412 9d2fb0f8ff949a0c95fd7fc7b47984a5 273 SMART SM00382 51 248 2.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1664 3f2aa29d7005a2cb0a6acc298910e28b 282 SUPERFAMILY SSF161098 71 258 4.84E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1664 3f2aa29d7005a2cb0a6acc298910e28b 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 4.0E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1664 3f2aa29d7005a2cb0a6acc298910e28b 282 Gene3D G3DSA:1.10.3720.10 66 273 2.9E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1542 a9734bdc96d1aca2bf74fae86c24b047 101 SUPERFAMILY SSF54909 2 91 3.75E-6 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A1542 a9734bdc96d1aca2bf74fae86c24b047 101 Gene3D G3DSA:3.30.70.100 1 96 2.8E-5 T 15-10-2018 VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 SUPERFAMILY SSF53850 89 282 4.89E-19 T 15-10-2018 VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 SUPERFAMILY SSF46785 3 112 1.18E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 Pfam PF03466 LysR substrate binding domain 88 281 1.3E-16 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 Gene3D G3DSA:1.10.10.10 3 89 2.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 Gene3D G3DSA:3.40.190.290 91 282 5.3E-27 T 15-10-2018 VIBNI_A2214 db7c178fd77935bda05ce110e0596ab1 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.9E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1087 63ef5f3e7bd2960d300d9350d9712e82 514 Pfam PF04293 SpoVR like protein 21 451 4.6E-178 T 15-10-2018 IPR007390 Sporulation stage V, protein R VIBNI_A1901 e82adcf28a4233514b2940468ec65f82 292 Pfam PF01261 Xylose isomerase-like TIM barrel 29 240 4.6E-35 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A1901 e82adcf28a4233514b2940468ec65f82 292 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 12 289 2.0E-143 T 15-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VIBNI_A1901 e82adcf28a4233514b2940468ec65f82 292 Gene3D G3DSA:3.20.20.150 7 290 4.5E-78 T 15-10-2018 VIBNI_A1901 e82adcf28a4233514b2940468ec65f82 292 SUPERFAMILY SSF51658 20 283 6.28E-56 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 SUPERFAMILY SSF81296 161 281 1.05E-20 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 Pfam PF11806 Domain of unknown function (DUF3327) 187 284 8.1E-13 T 15-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 Gene3D G3DSA:3.40.50.1820 285 535 8.1E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 Pfam PF00756 Putative esterase 309 530 5.0E-28 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 SUPERFAMILY SSF53474 296 533 8.25E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0803 4d151c726b1a4c3ea3883b6994750361 538 Gene3D G3DSA:2.60.40.10 154 281 1.2E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2741 e7ef293bf0d3b9f0295c8436c558a818 321 PIRSF PIRSF006470 1 321 6.3E-78 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2741 e7ef293bf0d3b9f0295c8436c558a818 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 7.6E-77 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2741 e7ef293bf0d3b9f0295c8436c558a818 321 Gene3D G3DSA:3.40.190.170 23 321 1.6E-117 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2741 e7ef293bf0d3b9f0295c8436c558a818 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 308 5.3E-92 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 348 1.1E-180 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 SUPERFAMILY SSF54197 5 178 8.19E-72 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 7 178 3.6E-67 T 15-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 Gene3D G3DSA:3.30.428.10 46 177 9.7E-55 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 PIRSF PIRSF000808 2 343 3.2E-122 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 348 2.6E-63 T 15-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 SUPERFAMILY SSF54197 181 346 9.59E-53 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 Gene3D G3DSA:3.30.428.10 178 349 3.6E-68 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_B0649 39f38a6095dec5b092c51829c12886de 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 15-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VIBNI_B2117 71302e5df1539bf64d4b435a0e3df230 134 Gene3D G3DSA:3.90.1010.10 1 134 5.5E-50 T 15-10-2018 VIBNI_B2117 71302e5df1539bf64d4b435a0e3df230 134 SUPERFAMILY SSF82649 3 131 2.88E-44 T 15-10-2018 VIBNI_B2117 71302e5df1539bf64d4b435a0e3df230 134 Pfam PF02657 Fe-S metabolism associated domain 8 128 3.8E-44 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VIBNI_B0092 cb0aaaaf1f63a0bdc830bf78fe126410 639 Gene3D G3DSA:2.60.40.3140 57 227 3.3E-12 T 15-10-2018 VIBNI_B0092 cb0aaaaf1f63a0bdc830bf78fe126410 639 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 88 204 1.0E-14 T 15-10-2018 IPR024618 Domain of unknown function DUF3857 VIBNI_B0092 cb0aaaaf1f63a0bdc830bf78fe126410 639 Gene3D G3DSA:3.10.620.30 260 406 3.2E-36 T 15-10-2018 VIBNI_B0092 cb0aaaaf1f63a0bdc830bf78fe126410 639 Pfam PF01841 Transglutaminase-like superfamily 276 384 2.7E-7 T 15-10-2018 IPR002931 Transglutaminase-like VIBNI_B0092 cb0aaaaf1f63a0bdc830bf78fe126410 639 SUPERFAMILY SSF54001 272 421 1.73E-12 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 159 1.1E-9 T 15-10-2018 VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 138 9.1E-14 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 3.4E-64 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 SUPERFAMILY SSF56784 20 178 1.19E-41 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 Gene3D G3DSA:3.40.50.1000 1 185 1.7E-59 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2955 e38cfc7530881d85db0d013eb43cc0c2 185 PIRSF PIRSF006118 10 185 3.6E-76 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 116 130 7.5E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 60 75 7.5E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 7.5E-11 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 Gene3D G3DSA:2.60.40.10 271 379 2.5E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 SMART SM00020 31 260 4.8E-76 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 Pfam PF00089 Trypsin 32 260 6.2E-58 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 Gene3D G3DSA:2.10.10.20 384 439 2.6E-9 T 15-10-2018 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 SUPERFAMILY SSF51055 386 433 2.49E-8 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 SUPERFAMILY SSF50494 5 264 1.59E-70 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 Gene3D G3DSA:2.40.10.10 24 264 4.4E-65 T 15-10-2018 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 70 75 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0298 35408b156c7c63de631015528dd0db17 442 SMART SM00495 390 434 8.7E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0471 a4da443f6d1b33622fed8c6394b447ab 222 PIRSF PIRSF033535 11 222 6.7E-50 T 15-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein VIBNI_A0471 a4da443f6d1b33622fed8c6394b447ab 222 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 33 219 3.0E-53 T 15-10-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein VIBNI_A0471 a4da443f6d1b33622fed8c6394b447ab 222 SUPERFAMILY SSF141318 54 221 1.44E-43 T 15-10-2018 IPR036215 TM0957-like superfamily VIBNI_A1052 ddfed9fec82c1194f8ee1beeffbcada7 501 PIRSF PIRSF006603 1 449 2.4E-78 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1052 ddfed9fec82c1194f8ee1beeffbcada7 501 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 413 1.5E-54 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1052 ddfed9fec82c1194f8ee1beeffbcada7 501 Pfam PF01554 MatE 243 403 2.4E-17 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1052 ddfed9fec82c1194f8ee1beeffbcada7 501 Pfam PF01554 MatE 29 184 5.8E-25 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 231 315 3.8E-19 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 138 230 2.8E-11 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 402 487 1.2E-17 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 52 137 4.6E-10 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 488 574 8.2E-13 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 316 401 4.1E-19 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Gene3D G3DSA:2.60.40.1080 575 671 3.0E-10 T 15-10-2018 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 49 130 8.7 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 576 662 10.0 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 231 311 1.9E-9 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 488 570 0.059 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 402 482 4.4E-7 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SMART SM00635 316 396 3.1E-10 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 SUPERFAMILY SSF49373 261 313 5.49E-6 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VIBNI_A2660 6a6c7b1bea89475641d19552d6581692 854 Pfam PF02368 Bacterial Ig-like domain (group 2) 408 474 5.8E-8 T 15-10-2018 IPR003343 Bacterial Ig-like, group 2 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 PIRSF PIRSF000101 1 566 5.6E-287 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Pfam PF01565 FAD binding domain 41 180 2.9E-8 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 55.127 T 15-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Gene3D G3DSA:3.30.70.610 264 344 3.5E-18 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Gene3D G3DSA:3.30.70.610 368 430 3.2E-16 T 15-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 274 562 1.1E-137 T 15-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 SUPERFAMILY SSF55103 271 561 6.76E-107 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Gene3D G3DSA:3.30.465.10 100 263 3.6E-71 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 SUPERFAMILY SSF56176 4 268 1.47E-64 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Gene3D G3DSA:3.30.43.10 1 97 3.2E-12 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VIBNI_A1880 069e3bee27822cb2245d844d09965287 568 Gene3D G3DSA:3.30.1370.20 431 515 5.6E-40 T 15-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 Pfam PF12801 4Fe-4S binding domain 97 136 1.4E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 470 1.6E-172 T 15-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.7E-41 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 Gene3D G3DSA:2.60.40.10 357 472 4.3E-44 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 469 8.0E-32 T 15-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 SUPERFAMILY SSF54862 107 358 4.78E-33 T 15-10-2018 VIBNI_A3844 b517ec06f8ace1ce3f447d897fc5ac84 472 Gene3D G3DSA:3.30.70.20 220 293 3.7E-5 T 15-10-2018 VIBNI_A3112 3a6e023f76427bd5e8607a9b59121f8f 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 181 1.5E-75 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VIBNI_A3112 3a6e023f76427bd5e8607a9b59121f8f 183 Gene3D G3DSA:3.40.30.10 20 181 7.3E-6 T 15-10-2018 VIBNI_A3112 3a6e023f76427bd5e8607a9b59121f8f 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 5.6E-71 T 15-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VIBNI_A2781 f6a52504323204d134f4670ac489dddc 66 Gene3D G3DSA:1.10.10.600 1 66 1.4E-30 T 15-10-2018 IPR036762 IscX-like superfamily VIBNI_A2781 f6a52504323204d134f4670ac489dddc 66 SUPERFAMILY SSF140319 2 64 2.09E-28 T 15-10-2018 IPR036762 IscX-like superfamily VIBNI_A2781 f6a52504323204d134f4670ac489dddc 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 3.3E-35 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VIBNI_A2781 f6a52504323204d134f4670ac489dddc 66 PIRSF PIRSF039003 3 66 2.8E-34 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VIBNI_A2781 f6a52504323204d134f4670ac489dddc 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 2.5E-33 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 SUPERFAMILY SSF55073 356 508 6.59E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 SUPERFAMILY SSF103190 179 241 6.67E-6 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 SMART SM00267 340 509 2.7E-55 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 508 1.0E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 Gene3D G3DSA:3.30.450.20 80 240 2.8E-8 T 15-10-2018 VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 Gene3D G3DSA:3.30.70.270 346 512 5.3E-46 T 15-10-2018 VIBNI_B1763 bf4825c47d507f5a264eb93280858ae5 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 505 3.1E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1230 905343142db304c6263daeb62909fe16 152 Gene3D G3DSA:1.10.10.10 1 88 1.5E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1230 905343142db304c6263daeb62909fe16 152 Gene3D G3DSA:3.30.1490.190 91 152 1.4E-11 T 15-10-2018 VIBNI_B1230 905343142db304c6263daeb62909fe16 152 Pfam PF01475 Ferric uptake regulator family 18 141 1.4E-10 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VIBNI_B1230 905343142db304c6263daeb62909fe16 152 SUPERFAMILY SSF46785 10 146 1.41E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 SUPERFAMILY SSF52518 1 177 4.0E-61 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.5E-48 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Gene3D G3DSA:3.40.50.970 1 177 1.4E-66 T 15-10-2018 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.7E-207 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 5.9E-55 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Gene3D G3DSA:3.40.50.1220 182 344 4.2E-49 T 15-10-2018 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 SUPERFAMILY SSF52518 358 545 1.34E-63 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Gene3D G3DSA:3.40.50.970 348 548 7.0E-64 T 15-10-2018 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 322 6.1E-40 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VIBNI_A3850 b24b2dc52b6081bb562aba558072d603 548 SUPERFAMILY SSF52467 183 341 2.41E-54 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 44.162 T 15-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 SMART SM00471 26 151 3.6E-4 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 Gene3D G3DSA:1.10.3210.10 1 194 2.3E-81 T 15-10-2018 VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 Pfam PF13023 HD domain 11 160 1.0E-13 T 15-10-2018 IPR006674 HD domain VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 183 2.0E-31 T 15-10-2018 VIBNI_A2417 79ab4276aa3718a0d0af531b1a182a2e 194 SUPERFAMILY SSF109604 4 185 2.63E-43 T 15-10-2018 VIBNI_A3415 0f0de2debe6697a6590451ca4c5883d2 201 Gene3D G3DSA:3.30.1050.10 7 119 4.4E-7 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VIBNI_A3415 0f0de2debe6697a6590451ca4c5883d2 201 SUPERFAMILY SSF55718 16 118 3.3E-10 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VIBNI_A3415 0f0de2debe6697a6590451ca4c5883d2 201 Pfam PF02036 SCP-2 sterol transfer family 15 111 3.8E-23 T 15-10-2018 IPR003033 SCP2 sterol-binding domain VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.2090.10 179 270 1.5E-255 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82866 790 1023 9.02E-48 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82693 149 325 2.67E-11 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:1.20.1640.10 12 511 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:1.20.1640.10 512 1018 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 6.7E-169 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82693 41 133 6.28E-22 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.70.1430 41 801 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82714 184 263 5.62E-11 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82866 290 491 2.88E-39 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 SUPERFAMILY SSF82714 706 788 6.41E-5 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.70.1430 567 653 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.70.1320 135 325 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.70.1440 654 852 1.5E-255 T 15-10-2018 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.7E-28 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VIBNI_A2814 ed664b92e681084544c12371e7637526 1044 Gene3D G3DSA:3.30.2090.10 705 793 1.5E-255 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 8.6E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 Gene3D G3DSA:3.40.190.10 99 286 1.0E-34 T 15-10-2018 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 Gene3D G3DSA:1.10.10.10 4 89 2.4E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 Pfam PF03466 LysR substrate binding domain 87 289 2.3E-25 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 Gene3D G3DSA:3.40.190.10 160 260 1.0E-34 T 15-10-2018 VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 SUPERFAMILY SSF46785 2 81 1.28E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1286 09aeb7b4bd6f9884e81ebe44483b2c91 294 SUPERFAMILY SSF53850 89 289 8.32E-28 T 15-10-2018 VIBNI_A2450 284c44ab728d0cb73474dd09766c998b 367 SUPERFAMILY SSF55073 203 349 9.42E-37 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2450 284c44ab728d0cb73474dd09766c998b 367 Gene3D G3DSA:3.30.70.270 185 350 1.9E-45 T 15-10-2018 VIBNI_A2450 284c44ab728d0cb73474dd09766c998b 367 SMART SM00267 187 350 8.1E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2450 284c44ab728d0cb73474dd09766c998b 367 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 346 6.5E-34 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2450 284c44ab728d0cb73474dd09766c998b 367 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 349 2.4E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1381 4b4ba84ea046170592298b73bd9d685b 408 Pfam PF01547 Bacterial extracellular solute-binding protein 38 326 2.1E-40 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1381 4b4ba84ea046170592298b73bd9d685b 408 SUPERFAMILY SSF53850 24 406 4.94E-75 T 15-10-2018 VIBNI_B1381 4b4ba84ea046170592298b73bd9d685b 408 Gene3D G3DSA:3.40.190.10 42 352 3.2E-133 T 15-10-2018 VIBNI_B1381 4b4ba84ea046170592298b73bd9d685b 408 Gene3D G3DSA:3.40.190.10 138 389 3.2E-133 T 15-10-2018 VIBNI_A2346 5b82693bccfc50150d7ddc3f8d9e390a 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 2.0E-17 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_A2346 5b82693bccfc50150d7ddc3f8d9e390a 176 PIRSF PIRSF004633 1 176 6.1E-76 T 15-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VIBNI_A2346 5b82693bccfc50150d7ddc3f8d9e390a 176 Gene3D G3DSA:2.30.110.10 11 176 2.0E-54 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_A2346 5b82693bccfc50150d7ddc3f8d9e390a 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 5 171 5.3E-89 T 15-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VIBNI_A2346 5b82693bccfc50150d7ddc3f8d9e390a 176 SUPERFAMILY SSF50475 12 163 4.12E-35 T 15-10-2018 VIBNI_B1433 d63b7c6ecce1dcab3ffc51cb1ca6b365 409 Pfam PF06181 Urate oxidase N-terminal 4 294 1.5E-126 T 15-10-2018 IPR010389 Urate oxidase N-terminal VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 5.6E-22 T 15-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 33.971 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Gene3D G3DSA:3.40.1390.10 1 99 1.2E-30 T 15-10-2018 VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Gene3D G3DSA:2.160.10.10 100 309 4.3E-64 T 15-10-2018 VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 SUPERFAMILY SSF51161 32 315 4.94E-85 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 3.2E-9 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 2.7E-7 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A2494 80f83702d7cdc76c37d90fb90d9b8353 339 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.2E-110 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VIBNI_A0208 207247b82be1824aaa7c8ce8fbdbc9ca 130 SUPERFAMILY SSF54211 5 130 6.45E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0208 207247b82be1824aaa7c8ce8fbdbc9ca 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.518 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VIBNI_A0208 207247b82be1824aaa7c8ce8fbdbc9ca 130 Gene3D G3DSA:3.30.230.10 1 130 4.1E-53 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A0208 207247b82be1824aaa7c8ce8fbdbc9ca 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.8E-45 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VIBNI_A0208 207247b82be1824aaa7c8ce8fbdbc9ca 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VIBNI_A1983 db0f3bb45e3f262ae6ecc524ed1a70a1 179 Gene3D G3DSA:3.90.1520.10 1 179 5.5E-57 T 15-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VIBNI_A1983 db0f3bb45e3f262ae6ecc524ed1a70a1 179 SUPERFAMILY SSF111126 1 176 7.32E-46 T 15-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VIBNI_A1983 db0f3bb45e3f262ae6ecc524ed1a70a1 179 Pfam PF07700 Haem-NO-binding 2 162 2.7E-37 T 15-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 Gene3D G3DSA:1.10.10.60 181 230 5.3E-12 T 15-10-2018 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 Gene3D G3DSA:1.10.10.60 231 284 2.6E-19 T 15-10-2018 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 9.0E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 9.0E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 SUPERFAMILY SSF46689 181 232 8.97E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 Pfam PF12833 Helix-turn-helix domain 204 283 4.5E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 SMART SM00342 198 281 5.1E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 SUPERFAMILY SSF46689 234 284 1.97E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1869 406bfd7cfdaf009a741ae2d116f7a3ad 285 SUPERFAMILY SSF51215 29 156 2.48E-5 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A1222 8455d503cde9f839a4f3b45a2b9ab260 261 SMART SM00382 40 255 1.4E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1222 8455d503cde9f839a4f3b45a2b9ab260 261 Pfam PF00005 ABC transporter 32 182 2.5E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1222 8455d503cde9f839a4f3b45a2b9ab260 261 SUPERFAMILY SSF52540 14 254 1.39E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1222 8455d503cde9f839a4f3b45a2b9ab260 261 Gene3D G3DSA:3.40.50.300 10 256 1.2E-52 T 15-10-2018 VIBNI_A1222 8455d503cde9f839a4f3b45a2b9ab260 261 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 Gene3D G3DSA:3.30.1240.10 82 185 7.9E-60 T 15-10-2018 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 SUPERFAMILY SSF56784 1 259 1.73E-59 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 229 5.8E-27 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 Gene3D G3DSA:3.40.50.1000 5 258 7.9E-60 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 15-10-2018 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 15-10-2018 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 258 1.6E-55 T 15-10-2018 VIBNI_B0989 a4418fc57b2585d0d3902b7e2e3868be 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 3.0E-47 T 15-10-2018 IPR000150 Cof family GO:0016787 VIBNI_B0610 c14bbc9b4a3d65d03c404ed4f4be5945 421 Gene3D G3DSA:3.30.559.10 9 206 2.2E-39 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0610 c14bbc9b4a3d65d03c404ed4f4be5945 421 SUPERFAMILY SSF52777 190 418 1.56E-15 T 15-10-2018 VIBNI_B0610 c14bbc9b4a3d65d03c404ed4f4be5945 421 Gene3D G3DSA:3.30.559.30 210 420 3.6E-22 T 15-10-2018 VIBNI_B0610 c14bbc9b4a3d65d03c404ed4f4be5945 421 Pfam PF00668 Condensation domain 5 419 2.0E-39 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0610 c14bbc9b4a3d65d03c404ed4f4be5945 421 SUPERFAMILY SSF52777 9 184 2.39E-28 T 15-10-2018 VIBNI_A3256 b8d02eff9bc5e1bc720e73028db72e64 166 Gene3D G3DSA:1.20.120.1490 44 163 8.8E-27 T 15-10-2018 VIBNI_A3256 b8d02eff9bc5e1bc720e73028db72e64 166 PIRSF PIRSF034445 1 158 1.1E-20 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VIBNI_A3256 b8d02eff9bc5e1bc720e73028db72e64 166 Pfam PF07813 LTXXQ motif family protein 48 148 7.9E-20 T 15-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VIBNI_A0419 057c20dc9a162c4005a182834a5d6007 331 Pfam PF16169 Domain of unknown function (DUF4872) 155 324 4.4E-45 T 15-10-2018 IPR032369 Domain of unknown function DUF4872 VIBNI_A0419 057c20dc9a162c4005a182834a5d6007 331 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 14 142 7.4E-43 T 15-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 SUPERFAMILY SSF46894 140 210 9.86E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.4E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.4E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.4E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 Gene3D G3DSA:1.10.10.10 144 212 1.8E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 4.0E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 Gene3D G3DSA:3.40.50.2300 10 143 1.3E-22 T 15-10-2018 VIBNI_A3030 8a973568f5f56bef86c143cd8a857357 213 SMART SM00421 150 207 5.6E-23 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0137 a36c2781f9e17d0a4ec2e847590a6c1b 203 Gene3D G3DSA:3.40.50.150 15 196 8.5E-28 T 15-10-2018 VIBNI_B0137 a36c2781f9e17d0a4ec2e847590a6c1b 203 SUPERFAMILY SSF53335 28 178 1.13E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0137 a36c2781f9e17d0a4ec2e847590a6c1b 203 Pfam PF13649 Methyltransferase domain 44 139 1.8E-16 T 15-10-2018 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.5E-74 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.58 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 Gene3D G3DSA:3.30.70.580 1 104 1.5E-38 T 15-10-2018 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 Pfam PF01416 tRNA pseudouridine synthase 144 244 7.1E-30 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.8E-9 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 Gene3D G3DSA:3.30.70.660 105 242 2.4E-49 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 PIRSF PIRSF001430 1 254 5.3E-74 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0803 b11e3eb343b078f9ff16b05b336d691e 263 SUPERFAMILY SSF55120 1 255 1.58E-91 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A0090 7f11ec874c81c7d41f1ac89154757976 231 Gene3D G3DSA:3.30.70.2970 41 148 7.9E-47 T 15-10-2018 VIBNI_A0090 7f11ec874c81c7d41f1ac89154757976 231 Gene3D G3DSA:3.30.110.170 31 227 7.9E-47 T 15-10-2018 VIBNI_A0090 7f11ec874c81c7d41f1ac89154757976 231 Pfam PF04402 Protein of unknown function (DUF541) 29 227 5.6E-38 T 15-10-2018 IPR007497 Protein of unknown function DUF541 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 15-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 Pfam PF01012 Electron transfer flavoprotein domain 4 158 8.0E-38 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 SUPERFAMILY SSF52402 3 182 2.02E-49 T 15-10-2018 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 Gene3D G3DSA:3.40.50.620 2 183 2.5E-52 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 PIRSF PIRSF000089 1 309 4.6E-102 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 Gene3D G3DSA:3.40.50.1220 184 309 3.6E-56 T 15-10-2018 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 SMART SM00893 3 187 1.7E-42 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 7.9E-36 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VIBNI_A0954 902336b9785bbbd506a496d14b494906 309 SUPERFAMILY SSF52467 187 309 3.71E-47 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 Gene3D G3DSA:3.30.420.40 245 513 1.5E-62 T 15-10-2018 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 SUPERFAMILY SSF53067 257 491 6.76E-51 T 15-10-2018 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 Gene3D G3DSA:3.30.420.40 2 243 2.2E-71 T 15-10-2018 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 455 2.8E-32 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 252 5.1E-56 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 SUPERFAMILY SSF53067 7 255 9.5E-60 T 15-10-2018 VIBNI_A0490 33b6afdee1d5464043fd9e4e18c14ce5 519 PIRSF PIRSF000538 5 510 8.4E-125 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B0827 2c308489d3a1a980203d405b64ab863f 158 Pfam PF11220 Protein of unknown function (DUF3015) 69 139 2.0E-9 T 15-10-2018 IPR021383 Protein of unknown function DUF3015 VIBNI_A0231 ec53b4934448a8512bccf3786cc08bd2 262 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 248 21.189 T 15-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VIBNI_A0231 ec53b4934448a8512bccf3786cc08bd2 262 Gene3D G3DSA:3.40.50.11690 126 253 1.0E-35 T 15-10-2018 VIBNI_A0231 ec53b4934448a8512bccf3786cc08bd2 262 Pfam PF08478 POTRA domain, FtsQ-type 55 124 2.3E-17 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type VIBNI_A0231 ec53b4934448a8512bccf3786cc08bd2 262 Pfam PF03799 Cell division protein FtsQ 128 240 2.9E-21 T 15-10-2018 IPR005548 Cell division protein FtsQ/DivIB VIBNI_A0231 ec53b4934448a8512bccf3786cc08bd2 262 Gene3D G3DSA:3.10.20.310 56 124 4.3E-25 T 15-10-2018 VIBNI_A2064 1c24102f1337a395de78f99d6e554fc3 277 SUPERFAMILY SSF51569 4 263 1.5E-55 T 15-10-2018 VIBNI_A2064 1c24102f1337a395de78f99d6e554fc3 277 Pfam PF01791 DeoC/LacD family aldolase 18 247 4.0E-26 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A2064 1c24102f1337a395de78f99d6e554fc3 277 Gene3D G3DSA:3.20.20.70 2 276 8.7E-55 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2064 1c24102f1337a395de78f99d6e554fc3 277 PIRSF PIRSF038992 1 277 2.7E-56 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A2064 1c24102f1337a395de78f99d6e554fc3 277 SMART SM01133 16 247 2.3E-9 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 Pfam PF13481 AAA domain 84 224 1.8E-13 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 Gene3D G3DSA:3.30.230.10 328 459 6.7E-17 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.088 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.4E-9 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 SUPERFAMILY SSF52540 70 294 4.09E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 SUPERFAMILY SSF54211 257 456 1.59E-42 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 Gene3D G3DSA:3.40.50.300 68 281 3.6E-38 T 15-10-2018 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.7E-225 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VIBNI_A0500 76760caa190284ef7e19610154a89ae1 459 SMART SM00382 93 246 6.6E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.1E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 3.3E-50 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 SMART SM00411 3 92 1.0E-40 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.411 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 SUPERFAMILY SSF47729 3 95 3.39E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A1410 59db310ab0b1beb05f40fc03ed4f7180 98 Gene3D G3DSA:4.10.520.10 1 98 1.8E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 15-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.3E-30 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 Pfam PF01678 Diaminopimelate epimerase 5 125 2.4E-34 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 Gene3D G3DSA:3.10.310.10 117 263 3.2E-107 T 15-10-2018 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.514 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 SUPERFAMILY SSF54506 2 274 1.57E-52 T 15-10-2018 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 Gene3D G3DSA:3.10.310.10 5 272 3.2E-107 T 15-10-2018 VIBNI_A3767 fbc07fc521a50364a0f42aaca924238d 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 7.9E-102 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 Gene3D G3DSA:3.40.50.1980 124 296 7.0E-42 T 15-10-2018 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 2.1E-7 T 15-10-2018 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 2.1E-7 T 15-10-2018 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 2.1E-7 T 15-10-2018 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 Pfam PF01497 Periplasmic binding protein 38 221 1.2E-20 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 SUPERFAMILY SSF53807 32 293 1.45E-49 T 15-10-2018 VIBNI_A0828 f2b129694830681070d40140c4c39d85 303 Gene3D G3DSA:3.40.50.1980 22 121 1.1E-24 T 15-10-2018 VIBNI_A2557 56316f5f8497df0a65f024574750d020 542 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 67 436 1.5E-50 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_A2557 56316f5f8497df0a65f024574750d020 542 Gene3D G3DSA:3.40.640.10 124 381 2.0E-102 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2557 56316f5f8497df0a65f024574750d020 542 SUPERFAMILY SSF53383 45 522 2.27E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2557 56316f5f8497df0a65f024574750d020 542 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 23 520 6.5E-189 T 15-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VIBNI_A2557 56316f5f8497df0a65f024574750d020 542 Gene3D G3DSA:3.90.1150.170 65 516 2.0E-102 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 Gene3D G3DSA:1.10.3860.10 7 402 7.5E-72 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 SUPERFAMILY SSF118215 15 397 2.88E-97 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 402 35.847 T 15-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 4.7E-16 T 15-10-2018 VIBNI_B1574 870e8f251acf4e3cee990a83e49245ce 402 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 9.1E-67 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_B0916 0c168f4142c3cd822263047c01a06497 482 SMART SM00327 321 479 2.8E-6 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_B0916 0c168f4142c3cd822263047c01a06497 482 SUPERFAMILY SSF53300 319 476 5.82E-27 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B0916 0c168f4142c3cd822263047c01a06497 482 Pfam PF05762 VWA domain containing CoxE-like protein 320 449 2.4E-10 T 15-10-2018 IPR008912 Uncharacterised protein family CoxE-like VIBNI_B0916 0c168f4142c3cd822263047c01a06497 482 Gene3D G3DSA:3.40.50.410 323 466 3.6E-8 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 SUPERFAMILY SSF47413 15 74 1.61E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 Gene3D G3DSA:3.40.50.2300 76 319 3.9E-55 T 15-10-2018 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 63 1.5E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 SMART SM00354 16 85 2.2E-22 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 Gene3D G3DSA:3.40.50.2300 173 302 3.9E-55 T 15-10-2018 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 Gene3D G3DSA:1.10.260.40 8 73 1.2E-19 T 15-10-2018 VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 SUPERFAMILY SSF53822 75 343 7.4E-55 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2152 38c1fdaf4f0dcf966d89bcd311e481b4 344 Pfam PF13377 Periplasmic binding protein-like domain 184 342 1.8E-22 T 15-10-2018 VIBNI_A1324 b68fb6eaf13bdf0415ca3caa3ae5034e 402 SMART SM00897 37 238 2.5E-50 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_A1324 b68fb6eaf13bdf0415ca3caa3ae5034e 402 Pfam PF08495 FIST N domain 41 236 7.7E-35 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_A1324 b68fb6eaf13bdf0415ca3caa3ae5034e 402 Pfam PF10442 FIST C domain 239 366 7.2E-15 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A1324 b68fb6eaf13bdf0415ca3caa3ae5034e 402 SMART SM01204 239 369 4.1E-28 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A1683 d3b5223d2f914c58eb9e678bad0c14ad 270 Gene3D G3DSA:1.10.3720.10 3 258 1.0E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1683 d3b5223d2f914c58eb9e678bad0c14ad 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 253 4.5E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1683 d3b5223d2f914c58eb9e678bad0c14ad 270 SUPERFAMILY SSF161098 6 270 1.7E-57 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3890 2e64e962e231c6542b4465fbba619652 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 3.9E-24 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A3890 2e64e962e231c6542b4465fbba619652 223 SUPERFAMILY SSF161098 13 206 8.11E-43 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3890 2e64e962e231c6542b4465fbba619652 223 Gene3D G3DSA:1.10.3720.10 1 221 1.1E-51 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3890 2e64e962e231c6542b4465fbba619652 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 2.0E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 Pfam PF00005 ABC transporter 19 161 1.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 SUPERFAMILY SSF52540 4 242 1.15E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 Pfam PF08402 TOBE domain 281 352 1.6E-12 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 Gene3D G3DSA:3.40.50.300 3 221 6.4E-67 T 15-10-2018 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 Gene3D G3DSA:2.40.50.940 222 353 1.4E-32 T 15-10-2018 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 Gene3D G3DSA:2.40.50.140 288 344 1.4E-32 T 15-10-2018 VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 SUPERFAMILY SSF50331 236 359 1.31E-23 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1684 0d0e83464bc47f912792e2c1fc3ab875 369 SMART SM00382 28 211 8.9E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1397 d1d766ba7f184291f2964bcf3c886d21 359 Pfam PF07995 Glucose / Sorbosone dehydrogenase 37 354 2.8E-104 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase VIBNI_A1397 d1d766ba7f184291f2964bcf3c886d21 359 SUPERFAMILY SSF50952 25 358 2.09E-45 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VIBNI_A1397 d1d766ba7f184291f2964bcf3c886d21 359 Gene3D G3DSA:2.120.10.30 20 358 7.4E-93 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 Gene3D G3DSA:3.40.50.200 265 566 1.5E-68 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 Pfam PF00082 Subtilase family 103 528 2.0E-49 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 PRINTS PR00723 Subtilisin serine protease family (S8) signature 100 119 8.0E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 PRINTS PR00723 Subtilisin serine protease family (S8) signature 318 331 8.0E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 PRINTS PR00723 Subtilisin serine protease family (S8) signature 490 506 8.0E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 491 501 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 SUPERFAMILY SSF52743 81 561 1.56E-64 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 322 332 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 105 116 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VIBNI_B0256 ed15883cd003cc24c5c951da435da1ff 566 Gene3D G3DSA:3.40.50.200 83 164 2.4E-15 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 Gene3D G3DSA:1.10.101.10 452 518 1.2E-19 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 SMART SM00382 42 195 1.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 Gene3D G3DSA:3.90.70.10 337 451 2.7E-25 T 15-10-2018 VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 Pfam PF01471 Putative peptidoglycan binding domain 458 514 2.2E-11 T 15-10-2018 IPR002477 Peptidoglycan binding-like VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 Pfam PF13401 AAA domain 42 170 8.5E-23 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 SUPERFAMILY SSF52540 5 264 7.15E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 SUPERFAMILY SSF47090 449 522 1.1E-12 T 15-10-2018 IPR036365 PGBD-like superfamily VIBNI_A0187 65c3036469ff1c297524e42b41480d13 535 Gene3D G3DSA:3.40.50.300 26 184 5.1E-15 T 15-10-2018 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 Pfam PF07687 Peptidase dimerisation domain 170 270 4.1E-23 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 SUPERFAMILY SSF53187 3 368 6.86E-57 T 15-10-2018 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 SUPERFAMILY SSF55031 174 269 2.24E-21 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 4 360 3.6E-69 T 15-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 65 74 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 Pfam PF01546 Peptidase family M20/M25/M40 67 366 6.6E-35 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 Gene3D G3DSA:3.40.630.10 6 357 7.7E-93 T 15-10-2018 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 Gene3D G3DSA:3.30.70.360 174 283 7.7E-93 T 15-10-2018 VIBNI_B0307 fcc9d58bedc914f3162c19c19a7a2476 372 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 138 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 SUPERFAMILY SSF69349 450 593 1.1E-34 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 SUPERFAMILY SSF69255 372 460 4.71E-34 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 Gene3D G3DSA:3.30.1920.30 230 293 3.8E-65 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 Gene3D G3DSA:2.30.110.50 15 335 3.8E-65 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 Gene3D G3DSA:2.40.50.230 363 464 1.1E-43 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 Gene3D G3DSA:3.55.50.10 109 199 3.8E-65 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 SUPERFAMILY SSF69279 12 195 5.67E-44 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 3.4E-167 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 25 513 3.1E-110 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 Pfam PF05954 Phage late control gene D protein (GPD) 31 334 2.9E-68 T 15-10-2018 VIBNI_A1444 9aeac8881734faee0300ae985d6d8c1b 603 SUPERFAMILY SSF69279 208 369 4.08E-15 T 15-10-2018 VIBNI_A2313 2b3f9f314391162868c9eab3ac05566a 286 Pfam PF01435 Peptidase family M48 78 285 2.5E-38 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VIBNI_A2313 2b3f9f314391162868c9eab3ac05566a 286 Gene3D G3DSA:3.30.2010.10 68 161 2.8E-38 T 15-10-2018 VIBNI_A2313 2b3f9f314391162868c9eab3ac05566a 286 Hamap MF_00188 Protease HtpX [htpX]. 1 286 25.475 T 15-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VIBNI_A0864 922ba2558a62c01a79a3c19e7e977a07 244 SUPERFAMILY SSF52317 16 231 7.23E-35 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0864 922ba2558a62c01a79a3c19e7e977a07 244 Pfam PF00117 Glutamine amidotransferase class-I 43 189 1.6E-14 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A0864 922ba2558a62c01a79a3c19e7e977a07 244 Gene3D G3DSA:3.40.50.880 1 236 2.4E-56 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Gene3D G3DSA:3.30.70.270 424 593 2.5E-35 T 15-10-2018 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 573 1.2E-29 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Gene3D G3DSA:1.20.1480.50 329 423 1.9E-9 T 15-10-2018 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SMART SM00304 367 420 5.0E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SMART SM00052 590 838 5.6E-98 T 15-10-2018 IPR001633 EAL domain VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SUPERFAMILY SSF158472 368 418 1.83E-7 T 15-10-2018 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 574 3.3E-22 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SUPERFAMILY SSF55073 431 574 7.77E-31 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SMART SM00267 415 580 6.7E-33 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Gene3D G3DSA:3.30.450.20 129 217 5.8E-11 T 15-10-2018 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Pfam PF02743 Cache domain 85 329 1.3E-15 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Gene3D G3DSA:3.20.20.450 594 850 9.7E-89 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 SUPERFAMILY SSF141868 597 844 7.32E-82 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A3482 cc17ca1f6e201a53efdc489afebb122a 851 Pfam PF00563 EAL domain 597 833 2.1E-71 T 15-10-2018 IPR001633 EAL domain VIBNI_A1559 b37de6987ae97557b5959d4227a14243 405 Pfam PF07690 Major Facilitator Superfamily 16 271 5.5E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A1559 b37de6987ae97557b5959d4227a14243 405 Gene3D G3DSA:1.20.1250.20 5 388 8.7E-52 T 15-10-2018 VIBNI_A1559 b37de6987ae97557b5959d4227a14243 405 SUPERFAMILY SSF103473 8 387 8.37E-59 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0674 676a7125d07e9105e857d4a6ded51822 389 SUPERFAMILY SSF48208 20 389 8.5E-101 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_B0674 676a7125d07e9105e857d4a6ded51822 389 Pfam PF07470 Glycosyl Hydrolase Family 88 51 328 5.2E-26 T 15-10-2018 IPR010905 Glycosyl hydrolase, family 88 VIBNI_B0674 676a7125d07e9105e857d4a6ded51822 389 Gene3D G3DSA:1.50.10.10 8 389 5.6E-116 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 SUPERFAMILY SSF50331 244 357 2.07E-12 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 SUPERFAMILY SSF52540 11 250 3.69E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 Gene3D G3DSA:2.40.50.140 287 349 1.8E-10 T 15-10-2018 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 Pfam PF00005 ABC transporter 26 168 6.4E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 330 3.1E-107 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 Gene3D G3DSA:2.40.50.940 229 354 1.8E-10 T 15-10-2018 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 SMART SM00382 35 218 5.4E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 Gene3D G3DSA:3.40.50.300 10 228 5.0E-68 T 15-10-2018 VIBNI_A3286 2480c558706dd71875aa5207ec5a5f13 358 Pfam PF08402 TOBE domain 281 357 3.3E-7 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A2490 b71b5a61b135b63bde2c88d910b3b790 206 Pfam PF01351 Ribonuclease HII 22 198 1.5E-38 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain VIBNI_A2490 b71b5a61b135b63bde2c88d910b3b790 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.296 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 VIBNI_A2490 b71b5a61b135b63bde2c88d910b3b790 206 Gene3D G3DSA:3.30.420.10 2 205 1.2E-77 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2490 b71b5a61b135b63bde2c88d910b3b790 206 SUPERFAMILY SSF53098 14 204 3.03E-68 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_B1509 4ae883c17be6f3d5698f3a6988734064 770 SMART SM00283 508 769 3.1E-73 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1509 4ae883c17be6f3d5698f3a6988734064 770 SMART SM00304 440 493 5.3E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1509 4ae883c17be6f3d5698f3a6988734064 770 SUPERFAMILY SSF58104 461 770 1.24E-72 T 15-10-2018 VIBNI_B1509 4ae883c17be6f3d5698f3a6988734064 770 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 582 735 3.8E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1509 4ae883c17be6f3d5698f3a6988734064 770 Gene3D G3DSA:1.10.287.950 440 770 6.9E-72 T 15-10-2018 VIBNI_A1055 f17f80fe59d0c97f091608ad7f1ac1ed 157 SMART SM00448 4 125 4.3E-12 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1055 f17f80fe59d0c97f091608ad7f1ac1ed 157 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-19 T 15-10-2018 VIBNI_A1055 f17f80fe59d0c97f091608ad7f1ac1ed 157 Pfam PF00072 Response regulator receiver domain 6 123 3.6E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1055 f17f80fe59d0c97f091608ad7f1ac1ed 157 SUPERFAMILY SSF52172 1 130 4.98E-20 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0067 9e4d75b576fec60f3db5146af3774714 532 Pfam PF05977 Transmembrane secretion effector 10 146 1.9E-5 T 15-10-2018 IPR010290 Transmembrane secretion effector VIBNI_B0067 9e4d75b576fec60f3db5146af3774714 532 SUPERFAMILY SSF103473 12 388 1.2E-38 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0067 9e4d75b576fec60f3db5146af3774714 532 Gene3D G3DSA:1.20.1250.20 205 381 1.0E-17 T 15-10-2018 VIBNI_B0067 9e4d75b576fec60f3db5146af3774714 532 Gene3D G3DSA:1.20.1250.20 4 190 3.9E-15 T 15-10-2018 VIBNI_B0067 9e4d75b576fec60f3db5146af3774714 532 Pfam PF07690 Major Facilitator Superfamily 208 378 6.4E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A2994 543d12cc1dea7de7f6c62901cf0658c5 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2994 543d12cc1dea7de7f6c62901cf0658c5 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2994 543d12cc1dea7de7f6c62901cf0658c5 153 Gene3D G3DSA:3.30.700.10 7 153 6.1E-13 T 15-10-2018 VIBNI_A2994 543d12cc1dea7de7f6c62901cf0658c5 153 SUPERFAMILY SSF54523 7 78 2.75E-13 T 15-10-2018 VIBNI_A2994 543d12cc1dea7de7f6c62901cf0658c5 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.2E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_B0643 f07816bd6daf50c2c78da89e4f9e8f1e 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 269 1.5E-56 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VIBNI_B0643 f07816bd6daf50c2c78da89e4f9e8f1e 271 SUPERFAMILY SSF51197 2 270 8.7E-81 T 15-10-2018 VIBNI_B0643 f07816bd6daf50c2c78da89e4f9e8f1e 271 Gene3D G3DSA:3.60.130.10 1 271 1.7E-78 T 15-10-2018 VIBNI_A0543 914147396db57d6ab0b677d253429b19 324 Gene3D G3DSA:1.50.10.150 5 317 1.1E-42 T 15-10-2018 IPR038665 Voltage-dependent anion channel superfamily VIBNI_A0543 914147396db57d6ab0b677d253429b19 324 Pfam PF03595 Voltage-dependent anion channel 19 306 3.8E-27 T 15-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VIBNI_B1776 e76f3d05ac1311984008389fc2060a94 231 SUPERFAMILY SSF54403 6 75 5.67E-8 T 15-10-2018 VIBNI_A1987 ff97d833d8c4df7a306fdd5532215e8b 158 Gene3D G3DSA:3.40.630.30 2 155 8.3E-16 T 15-10-2018 VIBNI_A1987 ff97d833d8c4df7a306fdd5532215e8b 158 Pfam PF00583 Acetyltransferase (GNAT) family 31 128 7.1E-7 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1987 ff97d833d8c4df7a306fdd5532215e8b 158 SUPERFAMILY SSF55729 4 154 7.03E-15 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1711 de4ec3c33f8283b010468f715d55cb7d 143 Pfam PF11749 Protein of unknown function (DUF3305) 41 133 4.2E-19 T 15-10-2018 IPR021736 Protein of unknown function DUF3305 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 Gene3D G3DSA:3.30.1370.30 2 72 5.7E-26 T 15-10-2018 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 Pfam PF00410 Ribosomal protein S8 5 129 9.7E-47 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 Gene3D G3DSA:3.30.1490.10 73 130 7.8E-25 T 15-10-2018 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.033 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3164 d9a2d09732085e103227061dbbb4d56b 130 SUPERFAMILY SSF56047 2 129 4.19E-44 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 SUPERFAMILY SSF47384 242 318 2.55E-9 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 SMART SM00388 259 322 2.2E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 SUPERFAMILY SSF55874 327 455 1.31E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 Gene3D G3DSA:1.10.287.130 197 315 6.2E-10 T 15-10-2018 VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 312 1.8E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 Gene3D G3DSA:3.30.565.10 325 465 7.2E-12 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2942 d7e57b18cc87ba9bfe86710a58b2f52c 481 SMART SM00387 367 464 5.1E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1327 ff8d24b4bdebd04434963c78499ff08a 227 Gene3D G3DSA:3.40.50.300 1 224 3.7E-66 T 15-10-2018 VIBNI_B1327 ff8d24b4bdebd04434963c78499ff08a 227 SMART SM00382 30 217 3.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1327 ff8d24b4bdebd04434963c78499ff08a 227 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1327 ff8d24b4bdebd04434963c78499ff08a 227 SUPERFAMILY SSF52540 1 221 1.69E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1327 ff8d24b4bdebd04434963c78499ff08a 227 Pfam PF00005 ABC transporter 21 169 2.7E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 Pfam PF03652 Holliday junction resolvase 5 137 6.5E-36 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 SMART SM00732 4 105 1.1E-35 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 SUPERFAMILY SSF53098 4 137 4.7E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 137 8.3E-49 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 Gene3D G3DSA:3.30.420.140 2 139 2.1E-39 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VIBNI_A0059 e1305938f370d28e2b80b6b83ac833cc 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 140 24.228 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VIBNI_A0414 fc584fa7abe7a5aaa4cc54ab9584eee9 228 Gene3D G3DSA:3.30.1300.30 128 227 2.5E-14 T 15-10-2018 VIBNI_A0414 fc584fa7abe7a5aaa4cc54ab9584eee9 228 Pfam PF03895 YadA-like membrane anchor domain 168 227 6.1E-9 T 15-10-2018 IPR005594 YadA-like, C-terminal VIBNI_A0414 fc584fa7abe7a5aaa4cc54ab9584eee9 228 SUPERFAMILY SSF54523 132 227 1.26E-10 T 15-10-2018 VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 139 6.2E-25 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 Gene3D G3DSA:3.40.50.720 17 357 3.0E-122 T 15-10-2018 VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 270 2.2E-8 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 Gene3D G3DSA:3.30.360.10 144 381 3.0E-122 T 15-10-2018 VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 SUPERFAMILY SSF51735 8 171 1.18E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2163 0f24e147ed5691168f2bef6f15ff35a5 387 SUPERFAMILY SSF55347 145 323 8.01E-33 T 15-10-2018 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 SUPERFAMILY SSF52172 1 118 3.42E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 SMART SM00448 1 112 2.2E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 Gene3D G3DSA:3.40.50.2300 1 122 3.6E-36 T 15-10-2018 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 SMART SM00862 145 216 8.1E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 SUPERFAMILY SSF46894 119 217 1.3E-26 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 Pfam PF00072 Response regulator receiver domain 3 113 4.1E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 Gene3D G3DSA:1.10.10.10 123 219 9.2E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2217 182095625dbac8b1e7fb8be8d415d18d 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.4E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 15-10-2018 IPR027486 Ribosomal protein S10 domain VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 15-10-2018 IPR027486 Ribosomal protein S10 domain VIBNI_A3179 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VIBNI_A2823 a70eb6c1dc77ae22f75733ba18f3436d 328 SUPERFAMILY SSF161098 93 324 1.44E-13 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2823 a70eb6c1dc77ae22f75733ba18f3436d 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.7E-39 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2823 a70eb6c1dc77ae22f75733ba18f3436d 328 Gene3D G3DSA:1.10.3720.10 87 327 3.4E-18 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Pfam PF00158 Sigma-54 interaction domain 145 311 6.6E-66 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 SMART SM00382 165 308 3.9E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 SUPERFAMILY SSF52540 145 374 5.47E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 SMART SM00448 4 115 7.0E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 SUPERFAMILY SSF52172 1 189 7.97E-41 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 SUPERFAMILY SSF46689 382 438 4.93E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Gene3D G3DSA:3.40.50.300 131 315 7.1E-59 T 15-10-2018 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Gene3D G3DSA:3.40.50.2300 1 130 3.1E-33 T 15-10-2018 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Gene3D G3DSA:1.10.8.60 316 380 2.2E-17 T 15-10-2018 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Pfam PF00072 Response regulator receiver domain 6 113 2.3E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 1.5E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3283 297a6bbe3f7829f8f0b496556aa96166 450 Gene3D G3DSA:1.10.10.60 383 440 7.1E-9 T 15-10-2018 VIBNI_A2962 80d1aa559313b32ecea5486a94a59505 119 Gene3D G3DSA:3.30.750.24 12 106 3.1E-14 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A2962 80d1aa559313b32ecea5486a94a59505 119 SUPERFAMILY SSF52091 15 95 3.14E-15 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A2962 80d1aa559313b32ecea5486a94a59505 119 Pfam PF13466 STAS domain 16 92 5.8E-18 T 15-10-2018 IPR002645 STAS domain VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 6.6E-46 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 SUPERFAMILY SSF52317 4 191 2.95E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 Gene3D G3DSA:3.40.50.880 2 191 3.6E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.2E-13 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.2E-13 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.2E-13 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.9E-34 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.7E-5 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.7E-5 T 15-10-2018 VIBNI_A1275 771a329abb7c59926040756c6b64d939 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 1.2E-52 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 SUPERFAMILY SSF63380 1 93 2.55E-26 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 Gene3D G3DSA:2.40.30.20 94 190 2.5E-29 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 Pfam PF00677 Lumazine binding domain 100 184 2.7E-22 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 Pfam PF00677 Lumazine binding domain 3 87 3.7E-20 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 Gene3D G3DSA:2.40.30.20 1 89 1.3E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 PIRSF PIRSF000498 1 203 6.6E-69 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 SUPERFAMILY SSF63380 93 199 4.0E-31 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A1658 796a74fb7694002114b77a52c3227857 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.2E-77 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VIBNI_A1837 400905d541295e57cfa7fa9d28cc375a 271 Pfam PF10127 Predicted nucleotidyltransferase 19 265 3.9E-84 T 15-10-2018 IPR018775 Nucleotidyltransferase, predicted VIBNI_A1897 c5bf985d8660d515ec38a5d600f8b290 194 Pfam PF02525 Flavodoxin-like fold 3 190 2.0E-41 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_A1897 c5bf985d8660d515ec38a5d600f8b290 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 28.817 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VIBNI_A1897 c5bf985d8660d515ec38a5d600f8b290 194 SUPERFAMILY SSF52218 1 193 3.86E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A1897 c5bf985d8660d515ec38a5d600f8b290 194 Gene3D G3DSA:3.40.50.360 2 194 3.3E-52 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 6.4E-41 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 462 1.5E-76 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 SUPERFAMILY SSF161070 3 470 2.48E-148 T 15-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2342 3a0b053e597442d6c464c6f8f4d98be6 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.6E-36 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A2944 04f550bcb63b635f75de20b6b2f14d0d 446 Gene3D G3DSA:3.40.50.80 333 443 1.6E-6 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A2944 04f550bcb63b635f75de20b6b2f14d0d 446 SUPERFAMILY SSF52343 332 395 8.64E-7 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.7E-294 T 15-10-2018 IPR017750 ATPase, type I secretion system VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 Gene3D G3DSA:1.20.1560.10 142 454 5.6E-57 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 Pfam PF00005 ABC transporter 487 635 4.8E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 SUPERFAMILY SSF52540 459 694 3.91E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 Gene3D G3DSA:3.40.50.300 460 702 6.0E-74 T 15-10-2018 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 Pfam PF00664 ABC transporter transmembrane region 158 417 1.5E-24 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 SUPERFAMILY SSF90123 137 452 1.05E-49 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 Gene3D G3DSA:3.90.70.10 1 126 5.7E-35 T 15-10-2018 VIBNI_B0024 6d2f5b9c960350073de76503e186ed0e 703 SMART SM00382 495 681 3.9E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 SUPERFAMILY SSF52402 1 212 2.87E-64 T 15-10-2018 VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 Gene3D G3DSA:3.40.50.620 1 230 1.1E-79 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 216 50.27 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 9.5E-84 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 PIRSF PIRSF006293 1 224 2.3E-83 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VIBNI_A1825 b66e89359ccc4d140efdfed2b33b2def 233 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 6.1E-85 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VIBNI_A3076 aad6e448fd7b28bbc7f88ef5671a0ca5 484 SUPERFAMILY SSF53383 18 453 7.58E-46 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3076 aad6e448fd7b28bbc7f88ef5671a0ca5 484 Gene3D G3DSA:3.40.640.10 65 360 2.9E-45 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3076 aad6e448fd7b28bbc7f88ef5671a0ca5 484 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 79 374 4.0E-15 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 97.185 T 15-10-2018 IPR008135 Competence-induced protein CinA VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 Gene3D G3DSA:3.40.980.10 1 171 4.1E-48 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 390 4.6E-75 T 15-10-2018 IPR008135 Competence-induced protein CinA VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 SUPERFAMILY SSF53218 1 197 7.59E-35 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 SUPERFAMILY SSF142433 253 387 7.85E-7 T 15-10-2018 IPR036653 CinA-like, C-terminal VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 Pfam PF00994 Probable molybdopterin binding domain 5 169 1.4E-29 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 PIRSF PIRSF006728 1 392 2.5E-99 T 15-10-2018 IPR008135 Competence-induced protein CinA VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 161 2.9E-27 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A2057 631d1a4bf015240a036c4035a2a4f79d 411 SMART SM00852 5 172 8.6E-30 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 SUPERFAMILY SSF81653 260 357 1.7E-22 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 207 517 4.6E-98 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 230 731 7.6E-82 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 472 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 580 591 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 676 688 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 672 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 612 9.5E-28 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Gene3D G3DSA:3.30.70.100 68 145 1.2E-13 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 460 466 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Gene3D G3DSA:3.40.1110.10 469 587 2.6E-83 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 207 755 3.1E-178 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Gene3D G3DSA:3.40.50.1000 439 705 2.6E-83 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 755 3.2E-120 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Pfam PF00702 haloacid dehalogenase-like hydrolase 454 666 2.4E-39 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 SUPERFAMILY SSF55008 62 130 7.98E-14 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 SUPERFAMILY SSF56784 457 753 9.42E-49 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Pfam PF00403 Heavy-metal-associated domain 73 127 5.4E-11 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 ProSitePatterns PS01047 Heavy-metal-associated domain. 71 100 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Gene3D G3DSA:2.70.150.20 257 362 1.2E-31 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00941 Cadmium-transporting ATPase signature 342 356 6.4E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00941 Cadmium-transporting ATPase signature 242 262 6.4E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00941 Cadmium-transporting ATPase signature 323 339 6.4E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 PRINTS PR00941 Cadmium-transporting ATPase signature 80 101 6.4E-5 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 Pfam PF00122 E1-E2 ATPase 258 438 8.6E-51 T 15-10-2018 VIBNI_A1056 88e9cd38f7b82f3815fc6ec37d471018 762 SUPERFAMILY SSF81665 210 741 7.85E-20 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 Pfam PF00593 TonB dependent receptor 214 715 8.4E-45 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 700 717 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 SUPERFAMILY SSF56935 32 717 4.27E-105 T 15-10-2018 VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 36 717 1.9E-110 T 15-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 Gene3D G3DSA:2.40.170.20 173 717 6.1E-73 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 Gene3D G3DSA:2.170.130.10 35 162 1.2E-28 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 158 3.0E-23 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B1731 0cfd78d75cfb426169b90642ebb65ac3 717 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 37 717 5.5E-112 T 15-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VIBNI_A2296 facb1912eac4289130cfb4b75302758b 466 SUPERFAMILY SSF56672 21 224 6.52E-28 T 15-10-2018 VIBNI_A3277 1d54787e345a1ec687626a7ca5731972 173 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 1.6E-35 T 15-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VIBNI_A2127 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 Gene3D G3DSA:3.50.50.60 5 336 1.4E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 7.6E-145 T 15-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 SUPERFAMILY SSF51905 3 375 9.58E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 Gene3D G3DSA:3.30.9.50 81 270 1.4E-95 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 4.7E-11 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.7E-11 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.7E-11 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 4.7E-11 T 15-10-2018 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 Pfam PF01494 FAD binding domain 4 345 3.2E-23 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 VIBNI_A0097 fe0727fb4b8dcf5c77aed1327aaaf61f 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 9.7E-125 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VIBNI_B1237 f4df2c4ddb14ab7058ef46d5c63bc75b 147 Pfam PF00989 PAS fold 16 134 1.2E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_B1237 f4df2c4ddb14ab7058ef46d5c63bc75b 147 Gene3D G3DSA:3.30.450.20 6 140 2.1E-32 T 15-10-2018 VIBNI_B1237 f4df2c4ddb14ab7058ef46d5c63bc75b 147 SUPERFAMILY SSF55785 10 129 1.17E-11 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Pfam PF14559 Tetratricopeptide repeat 125 190 2.4E-13 T 15-10-2018 VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 SUPERFAMILY SSF52833 4 111 5.3E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Gene3D G3DSA:1.25.40.10 197 284 2.9E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Pfam PF00085 Thioredoxin 7 109 5.7E-17 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.2E-27 T 15-10-2018 VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Gene3D G3DSA:3.40.30.10 1 111 1.6E-24 T 15-10-2018 VIBNI_A2613 b72964369f0cb9f87c2d8b06e8717113 284 Gene3D G3DSA:1.25.40.10 112 196 2.8E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 SUPERFAMILY SSF51395 7 375 1.95E-98 T 15-10-2018 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 Gene3D G3DSA:3.20.20.70 2 380 3.1E-126 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 PIRSF PIRSF000138 2 380 5.7E-123 T 15-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 15-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 72.534 T 15-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 VIBNI_B0798 1b48e7e9375614e17b80c40e47b33b7b 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.4E-126 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 9.5E-21 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 SMART SM00382 315 436 0.003 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 SUPERFAMILY SSF52540 181 560 3.45E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 SUPERFAMILY SSF160246 2 145 3.92E-38 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 Pfam PF00437 Type II/IV secretion system protein 192 454 3.0E-78 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 Gene3D G3DSA:3.40.50.300 290 567 1.2E-100 T 15-10-2018 VIBNI_A2998 51132ecfd842fedcfb9e734cd3b0b97a 575 Gene3D G3DSA:3.30.450.90 152 287 4.5E-43 T 15-10-2018 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 SUPERFAMILY SSF50494 10 301 4.23E-52 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 239 251 1.7E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 61 76 1.7E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 130 144 1.7E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 Pfam PF00089 Trypsin 26 294 8.8E-32 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 329 350 1.2E-4 T 15-10-2018 IPR020008 GlyGly-CTERM domain VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 Gene3D G3DSA:2.40.10.10 17 299 2.9E-48 T 15-10-2018 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 240 251 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 SMART SM00020 25 294 7.4E-33 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0821 c2f26f1b1845007e3262098b996fe683 350 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 Pfam PF02119 Flagellar P-ring protein 24 364 2.2E-135 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 162 180 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 252 264 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 24 39 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 39 54 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 188 206 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 1.1E-84 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A2634 5944eabaeac648b4306fb647e873365d 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 365 39.41 T 15-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 682 1.6E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Pfam PF00072 Response regulator receiver domain 709 819 1.3E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SMART SM00387 576 685 2.1E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Gene3D G3DSA:1.20.1480.50 239 331 1.1E-11 T 15-10-2018 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SUPERFAMILY SSF47384 462 532 2.16E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Gene3D G3DSA:1.10.287.130 461 534 7.4E-18 T 15-10-2018 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Gene3D G3DSA:3.30.565.10 538 691 3.8E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SMART SM00304 275 328 3.7E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SMART SM00388 469 535 9.7E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SUPERFAMILY SSF52172 706 820 2.13E-20 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Gene3D G3DSA:3.40.50.2300 705 822 1.1E-18 T 15-10-2018 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SUPERFAMILY SSF55785 325 442 6.47E-9 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SMART SM00448 707 819 1.0E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Gene3D G3DSA:3.30.450.20 332 460 7.9E-15 T 15-10-2018 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SUPERFAMILY SSF55874 526 683 2.49E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 642 1.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 628 1.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 663 1.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 682 1.8E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Pfam PF00672 HAMP domain 277 324 1.3E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 335 461 3.6E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 2.0E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 Pfam PF12860 PAS fold 344 459 2.0E-28 T 15-10-2018 VIBNI_A1130 79ac116f9f14964694c6998b059110c2 822 SUPERFAMILY SSF158472 277 323 1.15E-7 T 15-10-2018 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 234 253 2.0E-25 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 Pfam PF10502 Signal peptidase, peptidase S26 231 271 2.0E-5 T 15-10-2018 IPR019533 Peptidase S26 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 SUPERFAMILY SSF51306 78 300 1.88E-66 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 Gene3D G3DSA:2.170.230.10 155 233 6.4E-72 T 15-10-2018 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 ProSitePatterns PS00761 Signal peptidases I signature 3. 239 252 - T 15-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 Gene3D G3DSA:2.10.109.10 78 274 6.4E-72 T 15-10-2018 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 274 2.0E-45 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VIBNI_A0113 0a87318ef90be9254450306d3c831186 301 Pfam PF00717 Peptidase S24-like 86 161 5.0E-22 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VIBNI_A0852 7cf20315407470702a0e02dffe38fd56 512 SUPERFAMILY SSF53720 26 499 1.1E-158 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A0852 7cf20315407470702a0e02dffe38fd56 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A0852 7cf20315407470702a0e02dffe38fd56 512 Pfam PF00171 Aldehyde dehydrogenase family 37 495 3.3E-165 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0852 7cf20315407470702a0e02dffe38fd56 512 Gene3D G3DSA:3.40.605.10 40 495 1.4E-167 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A0852 7cf20315407470702a0e02dffe38fd56 512 Gene3D G3DSA:3.40.309.10 274 467 1.4E-167 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 SUPERFAMILY SSF52540 276 506 3.22E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 SUPERFAMILY SSF52540 24 253 1.02E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 Gene3D G3DSA:3.40.50.300 14 267 2.4E-55 T 15-10-2018 VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 SMART SM00382 51 241 9.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 SMART SM00382 301 503 0.0026 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 Gene3D G3DSA:3.40.50.300 277 515 3.3E-43 T 15-10-2018 VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 Pfam PF00005 ABC transporter 42 193 2.3E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2137 736daf6d2100ce5617bca416b888ab63 517 Pfam PF00005 ABC transporter 293 447 1.1E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3319 a1d2a78dbf3625fa49040c0417e9a0b7 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.7E-77 T 15-10-2018 IPR007338 Protein of unknown function DUF416 VIBNI_A3319 a1d2a78dbf3625fa49040c0417e9a0b7 195 Gene3D G3DSA:1.20.1590.10 3 195 8.5E-66 T 15-10-2018 IPR023381 YP001051499.1-like domain superfamily VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 Gene3D G3DSA:3.40.220.10 1 159 1.1E-59 T 15-10-2018 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 SUPERFAMILY SSF52949 1 184 6.47E-52 T 15-10-2018 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 490 6.4E-124 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 40.586 T 15-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 SUPERFAMILY SSF53187 180 497 2.73E-123 T 15-10-2018 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 3.7E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 3.7E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 3.7E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 3.7E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 3.7E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 Gene3D G3DSA:3.40.630.10 181 498 8.4E-139 T 15-10-2018 VIBNI_A2968 4ee970d256e9b381f82dfdce103763db 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.6E-34 T 15-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VIBNI_A0510 05331882810fe757d328e662d2c69518 68 Pfam PF06568 Domain of unknown function (DUF1127) 24 58 6.2E-9 T 15-10-2018 IPR009506 Protein of unknown function DUF1127 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 SUPERFAMILY SSF52540 143 386 3.92E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 SUPERFAMILY SSF46689 442 494 7.17E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Pfam PF00158 Sigma-54 interaction domain 144 309 4.1E-68 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Gene3D G3DSA:1.10.10.60 450 491 2.0E-10 T 15-10-2018 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Pfam PF02954 Bacterial regulatory protein, Fis family 454 490 9.3E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Gene3D G3DSA:1.10.8.60 315 393 8.8E-24 T 15-10-2018 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 SUPERFAMILY SSF52172 1 187 1.85E-39 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 SMART SM00382 163 305 2.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Pfam PF00072 Response regulator receiver domain 6 115 9.1E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Gene3D G3DSA:3.40.50.2300 1 132 5.8E-31 T 15-10-2018 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 SMART SM00448 4 115 1.4E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A1484 ae35340c3f26044d30d32d04f3723724 501 Gene3D G3DSA:3.40.50.300 133 314 1.1E-64 T 15-10-2018 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 93 5.2E-24 T 15-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 PIRSF PIRSF029775 1 104 1.2E-39 T 15-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 Gene3D G3DSA:1.20.59.10 4 104 1.1E-34 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 SUPERFAMILY SSF48600 5 97 2.9E-24 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 Pfam PF01817 Chorismate mutase type II 17 93 2.9E-15 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B0614 ff889ab1ef7ff44b6217cca4e68af021 113 SMART SM00830 17 96 7.9E-23 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_B1079 c2bd973b00a2a1513b32e4d9239d437a 217 SUPERFAMILY SSF47616 83 200 5.46E-14 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_B1079 c2bd973b00a2a1513b32e4d9239d437a 217 SUPERFAMILY SSF52833 3 84 1.42E-16 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1079 c2bd973b00a2a1513b32e4d9239d437a 217 Pfam PF13409 Glutathione S-transferase, N-terminal domain 11 75 8.3E-9 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B1079 c2bd973b00a2a1513b32e4d9239d437a 217 Gene3D G3DSA:3.40.30.10 6 198 8.8E-55 T 15-10-2018 VIBNI_B1079 c2bd973b00a2a1513b32e4d9239d437a 217 Gene3D G3DSA:1.20.1050.10 84 193 8.8E-55 T 15-10-2018 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 127 5.3E-33 T 15-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 Gene3D G3DSA:2.30.330.10 44 135 1.4E-33 T 15-10-2018 IPR036429 SpoA-like superfamily VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 55 71 9.9E-28 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 116 9.9E-28 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 101 9.9E-28 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 88 9.9E-28 T 15-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 SUPERFAMILY SSF101801 53 133 9.68E-25 T 15-10-2018 IPR036429 SpoA-like superfamily VIBNI_A0731 660d300251eaf1b78098e531f2f1c303 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 125 1.4E-24 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 3.3E-56 T 15-10-2018 VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 5.6E-15 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.4E-132 T 15-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 Gene3D G3DSA:3.10.180.10 158 355 1.5E-69 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 PIRSF PIRSF009283 2 355 7.8E-126 T 15-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 SUPERFAMILY SSF54593 5 341 3.76E-78 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1596 0e3035124631369d8ffde86e61945964 357 Gene3D G3DSA:3.10.180.10 1 155 4.5E-47 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 19 26 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 Gene3D G3DSA:3.30.420.40 220 262 6.5E-35 T 15-10-2018 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 SUPERFAMILY SSF53067 16 208 1.1E-25 T 15-10-2018 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 Gene3D G3DSA:3.90.640.10 263 343 6.5E-35 T 15-10-2018 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 PRINTS PR00301 70kDa heat shock protein signature 15 28 4.8E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 PRINTS PR00301 70kDa heat shock protein signature 233 243 4.8E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 PRINTS PR00301 70kDa heat shock protein signature 166 186 4.8E-7 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 SUPERFAMILY SSF53067 222 484 3.78E-26 T 15-10-2018 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 Pfam PF00012 Hsp70 protein 17 348 1.9E-14 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VIBNI_A1956 ab7025cb2e5934ee1edc997f393330b8 639 Gene3D G3DSA:3.30.420.40 17 217 6.5E-35 T 15-10-2018 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 Gene3D G3DSA:1.25.40.80 138 273 2.3E-16 T 15-10-2018 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 Pfam PF00875 DNA photolyase 6 129 3.9E-19 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 Gene3D G3DSA:3.40.50.620 1 129 7.1E-28 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 SUPERFAMILY SSF48173 187 464 5.76E-82 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 312 324 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 Pfam PF03441 FAD binding domain of DNA photolyase 262 458 2.7E-60 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 SUPERFAMILY SSF52425 4 169 2.49E-42 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 PRINTS PR00147 DNA photolyase signature 332 350 1.1E-7 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 PRINTS PR00147 DNA photolyase signature 312 328 1.1E-7 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VIBNI_A0451 8a7a5783064286043509868acdb53bd9 483 Gene3D G3DSA:1.10.579.10 279 474 3.1E-63 T 15-10-2018 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 Pfam PF13191 AAA ATPase domain 237 422 3.6E-12 T 15-10-2018 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SUPERFAMILY SSF52540 222 486 3.62E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 Pfam PF01381 Helix-turn-helix 15 71 2.1E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00530 14 73 1.9E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SUPERFAMILY SSF48452 630 802 2.37E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 Gene3D G3DSA:1.10.260.40 10 77 1.8E-11 T 15-10-2018 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 Gene3D G3DSA:1.25.40.10 611 724 1.4E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00028 767 800 0.03 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00028 727 760 91.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00028 650 683 0.028 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00028 614 647 18.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SMART SM00028 887 920 87.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SUPERFAMILY SSF48452 727 973 2.66E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1775 48293c9c05244c09aef77868cfb498fb 1052 SUPERFAMILY SSF47413 12 76 1.21E-7 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 SUPERFAMILY SSF52540 6 242 3.96E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 92 107 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 SMART SM00382 26 178 1.5E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 6 328 1.4E-157 T 15-10-2018 IPR014317 Transcription activator PspF VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 220 229 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 SUPERFAMILY SSF46689 220 330 3.88E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 311 4.7E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 311 331 4.7E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 Gene3D G3DSA:3.40.50.300 1 177 2.5E-58 T 15-10-2018 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 Gene3D G3DSA:1.10.8.60 178 260 6.3E-25 T 15-10-2018 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 Pfam PF00158 Sigma-54 interaction domain 6 168 3.7E-57 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 Gene3D G3DSA:1.10.10.60 261 330 3.4E-7 T 15-10-2018 VIBNI_A1360 4c042159b173589d9fd0f28ab65dd5dd 336 Pfam PF02954 Bacterial regulatory protein, Fis family 295 328 1.2E-4 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 Gene3D G3DSA:3.10.290.10 1 60 1.8E-20 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 SUPERFAMILY SSF55174 5 97 1.62E-14 T 15-10-2018 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 4.6E-55 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 Pfam PF00849 RNA pseudouridylate synthase 68 202 9.0E-18 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 Pfam PF01479 S4 domain 4 43 2.1E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 Gene3D G3DSA:3.30.2350.10 62 250 7.3E-49 T 15-10-2018 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 SMART SM00363 3 73 2.8E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A1280 fb264d1e4274ed28c9d3e93efe6433fa 303 SUPERFAMILY SSF55120 68 237 7.38E-43 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B0314 8a86e2b3f6405559a85b59d6f82838f7 956 SUPERFAMILY SSF51055 30 87 3.53E-11 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0314 8a86e2b3f6405559a85b59d6f82838f7 956 Gene3D G3DSA:2.10.10.20 29 88 3.7E-18 T 15-10-2018 VIBNI_B0314 8a86e2b3f6405559a85b59d6f82838f7 956 Pfam PF14600 Cellulose-binding domain 29 88 2.1E-30 T 15-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_B0314 8a86e2b3f6405559a85b59d6f82838f7 956 SMART SM00495 42 84 6.3E-6 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 SMART SM00346 10 100 3.3E-10 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 Gene3D G3DSA:1.10.10.10 8 82 1.0E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 Pfam PF09339 IclR helix-turn-helix domain 12 61 2.2E-10 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 SUPERFAMILY SSF46785 10 81 1.23E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 Gene3D G3DSA:3.30.450.40 84 253 2.5E-25 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 SUPERFAMILY SSF55781 76 250 6.02E-24 T 15-10-2018 VIBNI_A0248 b30b57dc887a707584f111932da8fc42 253 Pfam PF01614 Bacterial transcriptional regulator 130 245 1.1E-8 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_B0813 791ae8676e8ee09b25e426a8854e96ef 1422 SUPERFAMILY SSF52540 33 151 2.13E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0813 791ae8676e8ee09b25e426a8854e96ef 1422 Gene3D G3DSA:3.40.50.300 41 148 4.0E-5 T 15-10-2018 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 SMART SM00851 19 132 8.8E-61 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Gene3D G3DSA:3.40.140.20 394 530 1.3E-59 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Gene3D G3DSA:3.40.140.20 219 375 5.2E-58 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 3.5E-257 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 SMART SM00798 137 462 1.2E-216 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Gene3D G3DSA:3.40.50.1380 1 200 3.3E-87 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 SUPERFAMILY SSF53927 222 530 2.81E-129 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 1.6E-118 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 SUPERFAMILY SSF52335 7 197 4.71E-72 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Pfam PF02142 MGS-like domain 19 132 8.4E-31 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.753 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_A3312 205ffac8b4e086f817b4fb0956db34d4 530 PIRSF PIRSF000414 1 530 3.1E-228 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 Gene3D G3DSA:3.90.25.10 193 328 6.4E-140 T 15-10-2018 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 SUPERFAMILY SSF51735 1 336 7.35E-97 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 Gene3D G3DSA:3.40.50.720 3 273 6.4E-140 T 15-10-2018 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.3E-140 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 4.1E-5 T 15-10-2018 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 4.1E-5 T 15-10-2018 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 4.1E-5 T 15-10-2018 VIBNI_B1126 1c3525404c77b5f0cea0970dd8bb92d1 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 6.1E-60 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_A1322 a67b1557983eab6b5577d58870615d39 672 Pfam PF00675 Insulinase (Peptidase family M16) 61 160 1.6E-7 T 15-10-2018 IPR011765 Peptidase M16, N-terminal VIBNI_A1322 a67b1557983eab6b5577d58870615d39 672 Gene3D G3DSA:3.30.830.10 11 233 6.7E-31 T 15-10-2018 VIBNI_A1322 a67b1557983eab6b5577d58870615d39 672 SUPERFAMILY SSF63411 47 227 9.35E-21 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A2959 631bb1be1b9b821bdb82a7474d87701d 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 260 7.8E-98 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VIBNI_A2959 631bb1be1b9b821bdb82a7474d87701d 262 Pfam PF02405 Permease MlaE 47 258 1.2E-75 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VIBNI_A1342 8ddde190f544a6a0d5168091e6017a77 268 Gene3D G3DSA:3.40.50.1820 21 265 1.2E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1342 8ddde190f544a6a0d5168091e6017a77 268 Pfam PF12697 Alpha/beta hydrolase family 28 255 1.5E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1342 8ddde190f544a6a0d5168091e6017a77 268 SUPERFAMILY SSF53474 28 259 9.96E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0603 fbbeaa71f494067e91ea946e31d925b1 382 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 49 364 1.9E-134 T 15-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC VIBNI_B0603 fbbeaa71f494067e91ea946e31d925b1 382 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 352 2.0E-42 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B0528 91ab6c3ad807f90b5ce85094471d7a6a 295 Gene3D G3DSA:3.20.20.150 1 290 2.0E-58 T 15-10-2018 VIBNI_B0528 91ab6c3ad807f90b5ce85094471d7a6a 295 Pfam PF01261 Xylose isomerase-like TIM barrel 31 243 4.4E-27 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_B0528 91ab6c3ad807f90b5ce85094471d7a6a 295 SUPERFAMILY SSF51658 5 270 6.63E-47 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 Gene3D G3DSA:1.10.10.10 8 77 7.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 SUPERFAMILY SSF64288 62 238 1.3E-39 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 SMART SM00345 14 73 2.7E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 Gene3D G3DSA:3.40.1410.10 82 238 2.0E-38 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 7.5E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 SMART SM00866 93 233 1.6E-26 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 SUPERFAMILY SSF46785 2 77 3.26E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.3E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.3E-6 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A1935 8c30a8efa87e14ccf5bd333cc2f5a305 239 Pfam PF07702 UTRA domain 97 231 1.5E-31 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_B0655 d6a0adcd682a03ce00171d096b0e87e6 243 SMART SM00382 30 224 1.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0655 d6a0adcd682a03ce00171d096b0e87e6 243 SUPERFAMILY SSF52540 4 233 5.95E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0655 d6a0adcd682a03ce00171d096b0e87e6 243 Gene3D G3DSA:3.40.50.300 1 241 1.3E-55 T 15-10-2018 VIBNI_B0655 d6a0adcd682a03ce00171d096b0e87e6 243 Pfam PF00005 ABC transporter 21 176 1.4E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 9.7E-69 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Pfam PF01029 NusB family 1 123 3.5E-23 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 SUPERFAMILY SSF48013 1 146 7.46E-36 T 15-10-2018 IPR035926 NusB-like superfamily VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Gene3D G3DSA:1.10.287.730 143 169 3.8E-14 T 15-10-2018 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 5 426 2.0E-152 T 15-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Gene3D G3DSA:3.30.70.1170 170 227 2.3E-26 T 15-10-2018 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Gene3D G3DSA:3.40.50.150 228 425 8.9E-71 T 15-10-2018 VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 SUPERFAMILY SSF53335 139 425 8.06E-82 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 Gene3D G3DSA:1.10.940.10 1 142 3.6E-44 T 15-10-2018 IPR035926 NusB-like superfamily VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.7E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.7E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.7E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.7E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A3838 739fc4d88d2c66a88a10845613498cef 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.7E-31 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_B1102 9eba0835d555a89b9acbf761d7143fab 194 Pfam PF13302 Acetyltransferase (GNAT) domain 52 165 9.3E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1102 9eba0835d555a89b9acbf761d7143fab 194 SUPERFAMILY SSF55729 27 184 1.06E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1102 9eba0835d555a89b9acbf761d7143fab 194 Gene3D G3DSA:3.40.630.30 35 167 3.1E-18 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 SUPERFAMILY SSF50475 3 322 3.61E-123 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 SUPERFAMILY SSF143968 323 477 1.83E-55 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 Gene3D G3DSA:1.20.5.570 586 620 1.9E-15 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 466 569 1.2E-21 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.9E-165 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 SUPERFAMILY SSF143968 480 619 1.16E-34 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 Gene3D G3DSA:3.40.1670.10 337 453 1.0E-48 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 Gene3D G3DSA:3.40.1670.10 479 585 2.8E-26 T 15-10-2018 VIBNI_A3783 780c479acfca80e88112fa89a2bc3c5e 620 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 5.4E-167 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VIBNI_A2447 e1e8b64beecf968d4ce2e9f5e7527403 415 Pfam PF01547 Bacterial extracellular solute-binding protein 60 323 5.5E-24 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A2447 e1e8b64beecf968d4ce2e9f5e7527403 415 SUPERFAMILY SSF53850 20 414 2.97E-62 T 15-10-2018 VIBNI_A2447 e1e8b64beecf968d4ce2e9f5e7527403 415 Gene3D G3DSA:3.40.190.10 24 371 3.8E-163 T 15-10-2018 VIBNI_A2447 e1e8b64beecf968d4ce2e9f5e7527403 415 Gene3D G3DSA:3.40.190.10 139 397 3.8E-163 T 15-10-2018 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 Gene3D G3DSA:3.10.20.30 1 105 1.1E-32 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 Gene3D G3DSA:1.10.1060.10 106 237 9.9E-56 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 SUPERFAMILY SSF46548 106 233 1.33E-39 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 SUPERFAMILY SSF54292 1 105 5.01E-30 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 229 1.3E-85 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 110 3.4E-30 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2564 9a58fe74e3ed4605ff26a2d5005405a8 237 Pfam PF13534 4Fe-4S dicluster domain 147 220 1.4E-10 T 15-10-2018 VIBNI_A0749 9d849542e5cbc73b0f8dcd604fa0fbdc 164 Pfam PF01584 CheW-like domain 20 156 2.7E-40 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0749 9d849542e5cbc73b0f8dcd604fa0fbdc 164 SUPERFAMILY SSF50341 14 159 3.53E-42 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A0749 9d849542e5cbc73b0f8dcd604fa0fbdc 164 Gene3D G3DSA:2.40.50.180 39 148 7.2E-43 T 15-10-2018 VIBNI_A0749 9d849542e5cbc73b0f8dcd604fa0fbdc 164 SMART SM00260 16 153 2.0E-50 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0749 9d849542e5cbc73b0f8dcd604fa0fbdc 164 Gene3D G3DSA:2.30.30.40 22 147 7.2E-43 T 15-10-2018 VIBNI_A0148 7b48365cb9827211f6d6cdd7348d4b8c 153 Gene3D G3DSA:1.10.10.10 104 151 4.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0148 7b48365cb9827211f6d6cdd7348d4b8c 153 Gene3D G3DSA:1.10.10.10 58 101 3.1E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0148 7b48365cb9827211f6d6cdd7348d4b8c 153 Pfam PF02631 RecX family 34 151 1.2E-30 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VIBNI_A0148 7b48365cb9827211f6d6cdd7348d4b8c 153 Gene3D G3DSA:1.10.10.10 11 52 1.3E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0148 7b48365cb9827211f6d6cdd7348d4b8c 153 Hamap MF_01114 Regulatory protein RecX [recX]. 4 153 14.239 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VIBNI_A0544 177f235530005889c035d595e3f2244e 292 Pfam PF13578 Methyltransferase domain 138 245 6.2E-16 T 15-10-2018 VIBNI_A0544 177f235530005889c035d595e3f2244e 292 Gene3D G3DSA:3.40.50.150 94 286 3.2E-30 T 15-10-2018 VIBNI_A0544 177f235530005889c035d595e3f2244e 292 SUPERFAMILY SSF53335 119 268 2.11E-19 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 SUPERFAMILY SSF46557 2 75 7.72E-26 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 Gene3D G3DSA:3.10.50.30 75 157 3.1E-31 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.42 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.7E-54 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 Gene3D G3DSA:1.10.287.180 1 74 2.3E-26 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.9E-26 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.0E-28 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 PIRSF PIRSF006092 1 157 1.4E-49 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VIBNI_A2807 50ba3e8332185ab5545a107967739453 157 SUPERFAMILY SSF54534 81 156 2.88E-24 T 15-10-2018 VIBNI_A3363 48419feb7338ff6b4b5b9adf24bd702e 236 SUPERFAMILY SSF53271 61 235 7.08E-36 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A3363 48419feb7338ff6b4b5b9adf24bd702e 236 Pfam PF00156 Phosphoribosyl transferase domain 180 234 8.4E-10 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VIBNI_A3363 48419feb7338ff6b4b5b9adf24bd702e 236 Gene3D G3DSA:3.40.50.2020 86 236 7.0E-16 T 15-10-2018 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 41 55 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 Gene3D G3DSA:3.30.950.10 152 286 4.9E-44 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 38 248 7.8E-45 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 36 269 4.6E-92 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 Gene3D G3DSA:3.40.1010.10 35 151 1.6E-43 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 116 149 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A3137 13740e78dfe3e2a261188120deeb0504 289 SUPERFAMILY SSF53790 32 275 2.22E-79 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 Pfam PF00005 ABC transporter 277 430 3.7E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 SUPERFAMILY SSF52540 8 232 3.24E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 Gene3D G3DSA:3.40.50.300 1 247 5.3E-59 T 15-10-2018 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 Pfam PF00005 ABC transporter 25 174 5.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 Gene3D G3DSA:3.40.50.300 263 506 6.7E-41 T 15-10-2018 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 SUPERFAMILY SSF52540 262 489 1.23E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 SMART SM00382 34 222 4.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2103 75c3dcc14dade9d5c6ffa2a6c045d8c2 509 SMART SM00382 285 479 5.5E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 SUPERFAMILY SSF46785 3 84 5.92E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 Gene3D G3DSA:1.10.10.10 2 87 5.4E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.4E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 SUPERFAMILY SSF53850 101 271 5.74E-14 T 15-10-2018 VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 Pfam PF03466 LysR substrate binding domain 105 271 2.3E-9 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0284 81199058e8f8afe654955cfb99c3c5ad 296 Gene3D G3DSA:3.40.190.290 94 290 2.0E-19 T 15-10-2018 VIBNI_B1613 0f078cc832eae683a78f20ea02f07abe 375 SUPERFAMILY SSF53756 64 373 2.42E-77 T 15-10-2018 VIBNI_B1613 0f078cc832eae683a78f20ea02f07abe 375 Pfam PF13439 Glycosyltransferase Family 4 69 179 1.7E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_B1613 0f078cc832eae683a78f20ea02f07abe 375 Gene3D G3DSA:3.40.50.2000 189 355 4.6E-44 T 15-10-2018 VIBNI_B1613 0f078cc832eae683a78f20ea02f07abe 375 Gene3D G3DSA:3.40.50.2000 10 188 1.6E-20 T 15-10-2018 VIBNI_B1613 0f078cc832eae683a78f20ea02f07abe 375 Pfam PF00534 Glycosyl transferases group 1 185 348 3.0E-38 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 2.4E-55 T 15-10-2018 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 15-10-2018 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 1.3E-51 T 15-10-2018 IPR000150 Cof family GO:0016787 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 15-10-2018 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 SUPERFAMILY SSF56784 1 271 7.88E-58 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 Gene3D G3DSA:3.30.1240.10 81 196 6.1E-55 T 15-10-2018 VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 Gene3D G3DSA:3.40.50.1000 3 267 6.1E-55 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A1899 4b8729134ab962c8386e6abfd92c6e86 282 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 239 1.7E-20 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SUPERFAMILY SSF47384 311 392 2.94E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SMART SM00388 326 391 2.4E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Pfam PF00072 Response regulator receiver domain 573 684 3.2E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 547 5.1E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 6.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 6.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 6.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 6.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Gene3D G3DSA:1.10.287.130 301 389 3.6E-25 T 15-10-2018 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Gene3D G3DSA:3.30.450.20 193 300 1.4E-7 T 15-10-2018 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Gene3D G3DSA:3.30.565.10 390 551 2.5E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 391 1.5E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SMART SM00448 571 684 1.6E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SMART SM00387 438 550 2.9E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SUPERFAMILY SSF55785 194 304 5.33E-8 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SUPERFAMILY SSF52172 569 687 1.42E-34 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 SUPERFAMILY SSF55874 380 548 7.47E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1749 a9bc31c53d46b728bdaa21146a2ee41b 688 Gene3D G3DSA:3.40.50.2300 552 687 1.9E-38 T 15-10-2018 VIBNI_B2080 0ee6e086f26d95ccb7a177669332ace7 147 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 143 1.7E-66 T 15-10-2018 IPR019884 YtoQ family protein VIBNI_B2080 0ee6e086f26d95ccb7a177669332ace7 147 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 144 3.6E-66 T 15-10-2018 IPR019884 YtoQ family protein VIBNI_B2080 0ee6e086f26d95ccb7a177669332ace7 147 Gene3D G3DSA:3.40.50.450 2 145 4.1E-6 T 15-10-2018 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 Gene3D G3DSA:1.10.10.10 1 85 7.7E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 Gene3D G3DSA:3.40.190.290 94 273 3.0E-34 T 15-10-2018 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.4E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 SUPERFAMILY SSF53850 95 291 3.41E-24 T 15-10-2018 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 Pfam PF03466 LysR substrate binding domain 95 288 1.2E-19 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0201 a8d9a16cb2c2266643acb70c74d1e135 294 SUPERFAMILY SSF46785 4 84 1.26E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 Pfam PF00444 Ribosomal protein L36 1 38 5.9E-20 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.035 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 SUPERFAMILY SSF57840 1 38 7.85E-17 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.8E-22 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3157 9b9b9c0ed90482098e798c4db5bdd6d6 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 1.0E-8 T 15-10-2018 VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 SUPERFAMILY SSF55781 209 366 4.1E-10 T 15-10-2018 VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 528 1.7E-47 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 SUPERFAMILY SSF55073 375 530 3.69E-47 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 529 7.6E-53 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 Gene3D G3DSA:3.30.70.270 368 534 1.9E-55 T 15-10-2018 VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 SMART SM00267 359 532 1.4E-61 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1838 c333bbd7705f0c8af5a22d64575a66bb 551 Gene3D G3DSA:3.30.450.40 203 367 1.8E-11 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 Gene3D G3DSA:3.40.50.300 250 498 5.0E-45 T 15-10-2018 VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 Pfam PF00005 ABC transporter 271 424 6.2E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 SUPERFAMILY SSF52540 239 477 4.22E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 SUPERFAMILY SSF52540 5 229 7.3E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 SMART SM00382 30 219 1.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 SMART SM00382 279 473 0.031 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 Gene3D G3DSA:3.40.50.300 2 239 1.5E-52 T 15-10-2018 VIBNI_A2590 846d410b87af15b364afafa107f34a3f 504 Pfam PF00005 ABC transporter 21 171 7.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 8.0E-76 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 SUPERFAMILY SSF116960 1 166 8.5E-59 T 15-10-2018 VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 Gene3D G3DSA:1.10.287.680 1 53 1.1E-30 T 15-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 PIRSF PIRSF006272 1 166 1.6E-73 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 Gene3D G3DSA:1.10.3190.10 54 166 7.0E-36 T 15-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 Pfam PF03887 YfbU domain 1 166 1.9E-64 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VIBNI_A1090 a1534e990fecb535ba61e44cbd509b15 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 36.675 T 15-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VIBNI_A3616 f109238f4c251914df280351a04fd0bc 115 Gene3D G3DSA:3.30.429.10 1 115 1.9E-33 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A3616 f109238f4c251914df280351a04fd0bc 115 SUPERFAMILY SSF55331 2 114 3.3E-35 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A3616 f109238f4c251914df280351a04fd0bc 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 94 3.4E-7 T 15-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VIBNI_A2061 0a3af1a62a95ca0c041e829b9192981d 334 SUPERFAMILY SSF53613 6 313 2.03E-47 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2061 0a3af1a62a95ca0c041e829b9192981d 334 Pfam PF00294 pfkB family carbohydrate kinase 6 318 1.8E-31 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A2061 0a3af1a62a95ca0c041e829b9192981d 334 Gene3D G3DSA:3.40.1190.20 1 331 3.8E-48 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0263 20b30463981acc5b8414a1de13ae18d4 143 Gene3D G3DSA:3.10.180.10 3 132 4.5E-20 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0263 20b30463981acc5b8414a1de13ae18d4 143 SUPERFAMILY SSF54593 5 127 8.46E-22 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0263 20b30463981acc5b8414a1de13ae18d4 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 121 2.5E-9 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 15-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 Gene3D G3DSA:3.90.780.10 391 582 4.7E-40 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 Gene3D G3DSA:3.60.21.10 20 381 1.0E-114 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 222 239 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 510 529 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 286 306 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 241 264 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 422 445 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 PRINTS PR01607 Apyrase family signature 29 47 5.0E-24 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 SUPERFAMILY SSF56300 27 379 4.38E-76 T 15-10-2018 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 Pfam PF02872 5'-nucleotidase, C-terminal domain 399 535 5.4E-30 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 Pfam PF00149 Calcineurin-like phosphoesterase 31 258 3.5E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_B0864 ef1b1ea98358794536085fae0a819e38 588 SUPERFAMILY SSF55816 400 563 2.35E-37 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 SUPERFAMILY SSF55811 61 243 4.46E-45 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 Gene3D G3DSA:3.90.79.10 126 253 1.5E-42 T 15-10-2018 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 96 124 1.1E-8 T 15-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 PRINTS PR00502 NUDIX hydrolase family signature 154 168 2.9E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 PRINTS PR00502 NUDIX hydrolase family signature 168 183 2.9E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 Gene3D G3DSA:3.90.79.20 1 125 3.2E-31 T 15-10-2018 VIBNI_A3323 6d2f4635bd5936d509aa54c9963d1b55 255 Pfam PF00293 NUDIX domain 132 234 2.5E-18 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 SMART SM00642 8 372 5.3E-19 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 Pfam PF00128 Alpha amylase, catalytic domain 28 224 2.5E-17 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 Gene3D G3DSA:3.20.20.80 5 377 3.4E-76 T 15-10-2018 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 PRINTS PR00110 Alpha-amylase signature 53 70 1.1E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 PRINTS PR00110 Alpha-amylase signature 199 210 1.1E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 PRINTS PR00110 Alpha-amylase signature 294 306 1.1E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 PRINTS PR00110 Alpha-amylase signature 86 97 1.1E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 PRINTS PR00110 Alpha-amylase signature 228 246 1.1E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B1510 3e19f5ded06235bfacc7398542a32d16 444 SUPERFAMILY SSF51445 9 341 4.69E-58 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 4.3E-66 T 15-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 Gene3D G3DSA:1.20.810.10 1 421 2.1E-151 T 15-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 SUPERFAMILY SSF81342 6 296 6.75E-93 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 PIRSF PIRSF038885 1 421 2.3E-154 T 15-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.4E-41 T 15-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VIBNI_A0210 f676ccc7d7f722ef7120b3aec59356c1 421 SUPERFAMILY SSF81648 297 412 1.05E-33 T 15-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VIBNI_A3247 06ce527e4ec9e161c6714930be1d348c 160 Pfam PF02308 MgtC family 18 140 8.1E-29 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VIBNI_A3247 06ce527e4ec9e161c6714930be1d348c 160 PRINTS PR01837 MgtC/SapB protein signature 40 58 9.5E-32 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VIBNI_A3247 06ce527e4ec9e161c6714930be1d348c 160 PRINTS PR01837 MgtC/SapB protein signature 21 40 9.5E-32 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VIBNI_A3247 06ce527e4ec9e161c6714930be1d348c 160 PRINTS PR01837 MgtC/SapB protein signature 67 89 9.5E-32 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VIBNI_A3247 06ce527e4ec9e161c6714930be1d348c 160 PRINTS PR01837 MgtC/SapB protein signature 94 118 9.5E-32 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VIBNI_A3328 839bb68cc0c32fe9fd76da57ea553561 163 Gene3D G3DSA:3.30.70.1730 1 124 1.8E-35 T 15-10-2018 VIBNI_A3328 839bb68cc0c32fe9fd76da57ea553561 163 SUPERFAMILY SSF160369 4 159 1.03E-45 T 15-10-2018 VIBNI_A3328 839bb68cc0c32fe9fd76da57ea553561 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.415 T 15-10-2018 IPR022973 Ribosomal protein L10 VIBNI_A3328 839bb68cc0c32fe9fd76da57ea553561 163 Pfam PF00466 Ribosomal protein L10 5 101 4.2E-27 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VIBNI_A3328 839bb68cc0c32fe9fd76da57ea553561 163 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 Pfam PF08402 TOBE domain 275 346 4.8E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 Pfam PF00005 ABC transporter 19 161 9.5E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 SUPERFAMILY SSF50331 236 352 2.92E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 SMART SM00382 28 211 1.5E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 Gene3D G3DSA:2.40.50.100 240 349 1.2E-16 T 15-10-2018 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 Gene3D G3DSA:2.40.50.140 278 339 1.2E-16 T 15-10-2018 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 Gene3D G3DSA:3.40.50.300 1 238 3.5E-76 T 15-10-2018 VIBNI_B1070 4264de265c40c366481baa924c9595cb 357 SUPERFAMILY SSF52540 4 241 7.98E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2545 8459d317bc5377155acaca3e0e87bb0e 140 SUPERFAMILY SSF54197 3 134 7.87E-32 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_A2545 8459d317bc5377155acaca3e0e87bb0e 140 Gene3D G3DSA:3.30.428.10 1 139 1.2E-42 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_A2545 8459d317bc5377155acaca3e0e87bb0e 140 PIRSF PIRSF000714 2 138 7.1E-51 T 15-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VIBNI_A2545 8459d317bc5377155acaca3e0e87bb0e 140 Pfam PF01230 HIT domain 9 99 2.8E-17 T 15-10-2018 IPR001310 Histidine triad (HIT) protein VIBNI_A2336 5402febfa85a4e88df9adf82ed6d2627 353 Gene3D G3DSA:3.90.226.10 109 306 2.8E-44 T 15-10-2018 VIBNI_A2336 5402febfa85a4e88df9adf82ed6d2627 353 SUPERFAMILY SSF52096 102 303 1.37E-28 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A2336 5402febfa85a4e88df9adf82ed6d2627 353 Gene3D G3DSA:3.40.1750.20 206 270 2.8E-44 T 15-10-2018 VIBNI_A2336 5402febfa85a4e88df9adf82ed6d2627 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 9.6E-55 T 15-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VIBNI_A2336 5402febfa85a4e88df9adf82ed6d2627 353 Pfam PF01343 Peptidase family S49 166 314 5.9E-48 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VIBNI_A0553 b197616eaf1ecfb7470707a922db0b6e 198 Gene3D G3DSA:3.40.50.880 1 191 1.7E-49 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0553 b197616eaf1ecfb7470707a922db0b6e 198 Pfam PF01965 DJ-1/PfpI family 4 169 2.3E-39 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_A0553 b197616eaf1ecfb7470707a922db0b6e 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 3.1E-61 T 15-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VIBNI_A0553 b197616eaf1ecfb7470707a922db0b6e 198 SUPERFAMILY SSF52317 4 190 1.12E-44 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1951 7aa62fbdcbd8985602689adb29ad4d36 297 Gene3D G3DSA:1.20.1530.20 1 290 3.1E-71 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A1951 7aa62fbdcbd8985602689adb29ad4d36 297 Pfam PF01758 Sodium Bile acid symporter family 13 200 2.0E-34 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VIBNI_A2263 35e454c10d864ba44718516e2c822a13 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.1E-170 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_A2263 35e454c10d864ba44718516e2c822a13 378 PIRSF PIRSF000267 2 377 4.2E-126 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_A2263 35e454c10d864ba44718516e2c822a13 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.6E-109 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 SMART SM00342 197 280 1.7E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 Gene3D G3DSA:1.10.10.60 181 229 4.4E-11 T 15-10-2018 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 SUPERFAMILY SSF46689 182 231 9.56E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 Pfam PF02311 AraC-like ligand binding domain 27 149 1.2E-5 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 SUPERFAMILY SSF51215 22 148 7.98E-7 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 Gene3D G3DSA:1.10.10.60 230 285 2.6E-16 T 15-10-2018 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 SUPERFAMILY SSF46689 233 283 2.82E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0155 2dba8bc245ce03480992537bb72f8abc 290 Pfam PF12833 Helix-turn-helix domain 203 281 2.9E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 Gene3D G3DSA:3.30.110.10 71 166 3.1E-39 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 28.214 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 Gene3D G3DSA:3.10.20.80 1 70 8.2E-28 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 71 2.9E-27 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 166 9.5E-72 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 ProSitePatterns PS00938 Initiation factor 3 signature. 53 66 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 SUPERFAMILY SSF54364 2 73 4.18E-25 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 SUPERFAMILY SSF55200 78 166 1.83E-34 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2088 4e4831f3d16a2f967ac28a774a057ee3 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 164 6.4E-37 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VIBNI_A2647 44018edf9ca7a4d9b9a37007022d172c 141 Pfam PF05130 FlgN protein 2 131 1.3E-23 T 15-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VIBNI_A2647 44018edf9ca7a4d9b9a37007022d172c 141 SUPERFAMILY SSF140566 1 113 1.28E-21 T 15-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VIBNI_A2647 44018edf9ca7a4d9b9a37007022d172c 141 Gene3D G3DSA:1.20.58.300 1 72 1.4E-7 T 15-10-2018 VIBNI_B1812 fd87c71e748e9e95c8078010a8043b29 1058 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 773 1046 5.6E-59 T 15-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain VIBNI_B1812 fd87c71e748e9e95c8078010a8043b29 1058 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 773 1048 6.2E-54 T 15-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain VIBNI_B1812 fd87c71e748e9e95c8078010a8043b29 1058 Pfam PF04738 Lantibiotic dehydratase, C terminus 43 699 6.8E-158 T 15-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 Pfam PF02541 Ppx/GppA phosphatase family 22 304 8.2E-87 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 SUPERFAMILY SSF53067 9 129 7.66E-36 T 15-10-2018 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 Gene3D G3DSA:3.30.420.150 113 291 1.3E-90 T 15-10-2018 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 Gene3D G3DSA:3.30.420.40 10 299 1.3E-90 T 15-10-2018 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 SUPERFAMILY SSF109604 309 497 2.32E-48 T 15-10-2018 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 SUPERFAMILY SSF53067 134 305 1.43E-46 T 15-10-2018 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 PIRSF PIRSF001267 1 498 3.6E-194 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 302 5.6E-101 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VIBNI_A0408 773782a8cbabd1b8770a9c45f4eb02ba 498 Gene3D G3DSA:1.10.3210.10 306 498 6.3E-60 T 15-10-2018 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.439 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Gene3D G3DSA:3.40.50.12780 50 515 3.7E-105 T 15-10-2018 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 SUPERFAMILY SSF56801 11 642 3.4E-181 T 15-10-2018 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.8E-24 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Pfam PF00501 AMP-binding enzyme 84 522 8.0E-94 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.7E-20 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 Gene3D G3DSA:3.30.300.30 518 649 8.1E-30 T 15-10-2018 VIBNI_A3298 477febd708374cfe3ac274379655eb9d 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B1004 e7aca41e97541677ee49235ba8ec1c8f 217 SUPERFAMILY SSF55073 81 215 2.04E-27 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1004 e7aca41e97541677ee49235ba8ec1c8f 217 SMART SM00267 66 216 3.3E-16 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1004 e7aca41e97541677ee49235ba8ec1c8f 217 Pfam PF00990 Diguanylate cyclase, GGDEF domain 77 215 8.3E-25 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1004 e7aca41e97541677ee49235ba8ec1c8f 217 Gene3D G3DSA:3.30.70.270 71 217 9.2E-33 T 15-10-2018 VIBNI_B1004 e7aca41e97541677ee49235ba8ec1c8f 217 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 75 215 3.0E-28 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 SMART SM00829 10 342 2.8E-7 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 SUPERFAMILY SSF51735 137 310 1.05E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 SUPERFAMILY SSF50129 1 173 1.52E-51 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 Pfam PF00107 Zinc-binding dehydrogenase 174 305 7.6E-24 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 5.4E-33 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 Gene3D G3DSA:3.90.180.10 18 333 3.3E-104 T 15-10-2018 VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 Gene3D G3DSA:3.40.50.720 151 290 3.3E-104 T 15-10-2018 VIBNI_A0489 ef7731fc2decd7cfdcb8b178be9071ae 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 Gene3D G3DSA:3.90.110.10 171 436 4.6E-102 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 SUPERFAMILY SSF56327 173 435 2.81E-92 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 9.5E-49 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.1E-63 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 SUPERFAMILY SSF51735 5 170 9.05E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 1.3E-50 T 15-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VIBNI_A3050 5d70789d23c3673b543f58885d00e9ab 436 Gene3D G3DSA:3.40.50.720 1 170 3.0E-68 T 15-10-2018 VIBNI_A0025 68779ed100f42c0c2cdbc5092f7f036b 151 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 7 149 9.3E-53 T 15-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0025 68779ed100f42c0c2cdbc5092f7f036b 151 Pfam PF06754 Phosphonate metabolism protein PhnG 8 148 1.3E-53 T 15-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_B2023 658676be747219a7e89ae748cdf62757 1014 PIRSF PIRSF036597 7 1007 3.0E-267 T 15-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VIBNI_B2023 658676be747219a7e89ae748cdf62757 1014 Gene3D G3DSA:2.60.40.10 777 871 2.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B2023 658676be747219a7e89ae748cdf62757 1014 SUPERFAMILY SSF55486 276 372 7.14E-5 T 15-10-2018 VIBNI_B2023 658676be747219a7e89ae748cdf62757 1014 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 154 439 1.2E-64 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_B2023 658676be747219a7e89ae748cdf62757 1014 Pfam PF05547 Immune inhibitor A peptidase M6 178 380 4.5E-12 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_A0513 cfa35d92984893daed098a807799d3a1 563 Gene3D G3DSA:3.40.50.12780 9 438 4.0E-82 T 15-10-2018 VIBNI_A0513 cfa35d92984893daed098a807799d3a1 563 Pfam PF00501 AMP-binding enzyme 24 442 2.8E-85 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A0513 cfa35d92984893daed098a807799d3a1 563 SUPERFAMILY SSF56801 16 549 1.57E-105 T 15-10-2018 VIBNI_A0513 cfa35d92984893daed098a807799d3a1 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B2159 f034f15318ee737ded46992648c91782 277 Gene3D G3DSA:3.30.540.10 3 148 1.6E-36 T 15-10-2018 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 7.2E-9 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 7.2E-9 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 7.2E-9 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 Pfam PF00459 Inositol monophosphatase family 8 240 2.5E-41 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 Gene3D G3DSA:3.40.190.80 170 276 7.8E-9 T 15-10-2018 VIBNI_B2159 f034f15318ee737ded46992648c91782 277 SUPERFAMILY SSF56655 11 271 1.57E-52 T 15-10-2018 VIBNI_B1326 33541730e87943f81b6d685613e575e6 427 Pfam PF02687 FtsX-like permease family 320 418 4.9E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_B1326 33541730e87943f81b6d685613e575e6 427 Pfam PF12704 MacB-like periplasmic core domain 31 258 1.9E-16 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.5E-257 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 Pfam PF01578 Cytochrome C assembly protein 89 297 1.8E-54 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.4E-95 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.0E-62 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0756 eff6ee2edeaf9196a6ddda95ae1c0f43 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.5E-126 T 15-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 SMART SM01350 179 469 3.2E-211 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 8.8E-51 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 Gene3D G3DSA:3.40.50.720 1 180 3.1E-56 T 15-10-2018 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 SUPERFAMILY SSF48179 177 472 8.16E-126 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 SUPERFAMILY SSF51735 4 174 1.32E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 5.3E-232 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 Gene3D G3DSA:1.20.5.320 435 482 1.2E-24 T 15-10-2018 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 1.3E-125 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 15-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.6E-84 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 Gene3D G3DSA:1.10.1040.10 181 434 1.2E-102 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_B1826 fbb18a053f2294d1f317f1fb5900902c 482 PIRSF PIRSF000109 1 477 9.9E-240 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Pfam PF04052 TolB amino-terminal domain 24 126 6.8E-35 T 15-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Gene3D G3DSA:2.120.10.30 185 450 1.3E-98 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 5.4E-8 T 15-10-2018 IPR011659 WD40-like Beta Propeller VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 247 1.9E-5 T 15-10-2018 IPR011659 WD40-like Beta Propeller VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 7.1E-14 T 15-10-2018 IPR011659 WD40-like Beta Propeller VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 2.4E-166 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 SUPERFAMILY SSF69304 175 448 2.35E-57 T 15-10-2018 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 SUPERFAMILY SSF52964 29 181 4.32E-41 T 15-10-2018 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.909 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VIBNI_A2257 109ca94844b83b62f5458eff57ac4728 450 Gene3D G3DSA:3.40.50.10070 23 183 5.7E-49 T 15-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 517 681 7.1E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 Pfam PF13185 GAF domain 366 506 1.8E-7 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SUPERFAMILY SSF55073 523 680 4.39E-33 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SUPERFAMILY SSF48452 55 166 5.56E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 519 677 8.8E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 Gene3D G3DSA:1.25.40.10 52 302 1.7E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SMART SM00267 507 681 1.7E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SUPERFAMILY SSF55781 348 513 2.16E-13 T 15-10-2018 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SMART SM00028 87 120 75.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SMART SM00028 126 159 1.5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 SMART SM00028 203 236 330.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 Gene3D G3DSA:3.30.450.40 340 510 4.5E-13 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A1309 2d23aa7eee5a7e54b991bb83cbbd2a63 688 Gene3D G3DSA:3.30.70.270 511 683 2.6E-40 T 15-10-2018 VIBNI_A0859 5e0b5400371d4257cffb47248ee05852 162 Gene3D G3DSA:3.90.79.10 1 141 4.6E-30 T 15-10-2018 VIBNI_A0859 5e0b5400371d4257cffb47248ee05852 162 Pfam PF00293 NUDIX domain 4 124 1.5E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A0859 5e0b5400371d4257cffb47248ee05852 162 SUPERFAMILY SSF55811 3 129 6.63E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_B0051 a855848bc24db84afba94032ef8a4a70 217 Gene3D G3DSA:3.40.50.360 1 215 6.7E-51 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0051 a855848bc24db84afba94032ef8a4a70 217 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 212 22.336 T 15-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VIBNI_B0051 a855848bc24db84afba94032ef8a4a70 217 SUPERFAMILY SSF52218 1 214 6.93E-38 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0051 a855848bc24db84afba94032ef8a4a70 217 Pfam PF02525 Flavodoxin-like fold 4 210 1.1E-33 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_A2715 f4cb64ce89149a4fb08a215ef0a7a79b 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 369 28.24 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2715 f4cb64ce89149a4fb08a215ef0a7a79b 373 Pfam PF01098 Cell cycle protein 25 367 1.2E-111 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2715 f4cb64ce89149a4fb08a215ef0a7a79b 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 3.4E-136 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A2715 f4cb64ce89149a4fb08a215ef0a7a79b 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A1358 bfc2164c8aea9e5ce75509a6063a4cdb 320 SUPERFAMILY SSF161098 66 298 6.21E-20 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1358 bfc2164c8aea9e5ce75509a6063a4cdb 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 3.4E-38 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1983 101ff9a9e32775a22ed3eae8ae97c07b 315 Gene3D G3DSA:3.40.190.10 125 243 2.5E-58 T 15-10-2018 VIBNI_B1983 101ff9a9e32775a22ed3eae8ae97c07b 315 PIRSF PIRSF017082 1 314 2.7E-51 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_B1983 101ff9a9e32775a22ed3eae8ae97c07b 315 Gene3D G3DSA:3.40.190.150 29 307 2.5E-58 T 15-10-2018 VIBNI_B1983 101ff9a9e32775a22ed3eae8ae97c07b 315 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 310 2.0E-34 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VIBNI_B1983 101ff9a9e32775a22ed3eae8ae97c07b 315 SUPERFAMILY SSF53850 31 270 4.16E-5 T 15-10-2018 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 SMART SM00422 1 69 2.9E-19 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 SUPERFAMILY SSF46955 1 115 2.75E-26 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 Pfam PF00376 MerR family regulatory protein 2 38 1.4E-17 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0255 431d3851c4a676b4818ac010b41563c4 117 Gene3D G3DSA:1.10.1660.10 1 117 1.8E-28 T 15-10-2018 VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 Gene3D G3DSA:3.60.15.10 1 252 4.3E-95 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.5E-29 T 15-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 SUPERFAMILY SSF56281 3 252 1.7E-70 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.254 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 SMART SM00849 12 166 2.3E-35 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 9.8E-106 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VIBNI_A2480 604bd5018a1c162736a5dcdc78aaccec 252 PIRSF PIRSF005457 1 252 3.0E-100 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 Pfam PF00487 Fatty acid desaturase 43 264 5.8E-22 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 233 247 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 12 32 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 190 211 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PRINTS PR00075 Fatty acid desaturase family 1 signature 159 177 4.1E-30 T 15-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VIBNI_B1512 50016ef12cd3cb01394639636bf42462 376 PIRSF PIRSF000345 5 341 3.4E-101 T 15-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 SUPERFAMILY SSF46689 57 105 1.25E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 SMART SM00871 132 290 1.3E-19 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 Gene3D G3DSA:1.10.10.60 3 57 6.9E-17 T 15-10-2018 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 7.6E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 7.6E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 Pfam PF14526 Integron-associated effector binding protein 140 289 8.5E-24 T 15-10-2018 IPR029441 Integron-associated effector binding protein VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 SMART SM00342 21 104 7.4E-28 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 SUPERFAMILY SSF55136 135 289 2.44E-18 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 SUPERFAMILY SSF46689 4 55 1.43E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 Gene3D G3DSA:1.10.10.60 58 118 6.5E-14 T 15-10-2018 VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 Gene3D G3DSA:3.20.80.10 132 291 1.1E-31 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B1930 9979a6ed1cc97cc010cc7f17c828860d 291 Pfam PF12833 Helix-turn-helix domain 27 104 7.7E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 Pfam PF00072 Response regulator receiver domain 3 111 4.2E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 SMART SM00448 1 112 2.4E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 Gene3D G3DSA:1.10.10.10 122 224 6.4E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 SMART SM00862 147 222 1.4E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 SUPERFAMILY SSF52172 1 130 2.13E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-35 T 15-10-2018 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 7.0E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A1046 bb8b6a52e8ab20fbeda72b860aa6e99c 224 SUPERFAMILY SSF46894 129 223 8.79E-29 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.9E-23 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 223 1.8E-11 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 Gene3D G3DSA:3.30.230.70 10 238 2.0E-62 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 SUPERFAMILY SSF54211 1 181 2.53E-45 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.5E-113 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.322 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 15-10-2018 IPR018336 Ribonuclease PH, conserved site VIBNI_A3705 6a011418bc722f63cf19bc6d8495c98c 238 SUPERFAMILY SSF55666 154 237 1.83E-26 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 SMART SM00642 24 382 3.1E-36 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 Pfam PF00128 Alpha amylase, catalytic domain 46 251 3.0E-13 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 SUPERFAMILY SSF51011 404 464 7.09E-7 T 15-10-2018 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 PRINTS PR00110 Alpha-amylase signature 240 258 2.7E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 PRINTS PR00110 Alpha-amylase signature 211 222 2.7E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 PRINTS PR00110 Alpha-amylase signature 98 109 2.7E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 PRINTS PR00110 Alpha-amylase signature 65 82 2.7E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 PRINTS PR00110 Alpha-amylase signature 306 318 2.7E-13 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 Gene3D G3DSA:3.20.20.80 20 387 1.2E-81 T 15-10-2018 VIBNI_B0919 974acc3488b72ade80042178c1679c4b 466 SUPERFAMILY SSF51445 18 373 1.24E-62 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A3080 74c42ec11bdb1732f3030911ecfe00f6 576 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 466 2.5E-39 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A3080 74c42ec11bdb1732f3030911ecfe00f6 576 Gene3D G3DSA:3.40.190.10 65 287 3.4E-48 T 15-10-2018 VIBNI_A3080 74c42ec11bdb1732f3030911ecfe00f6 576 SUPERFAMILY SSF53850 70 548 1.59E-51 T 15-10-2018 VIBNI_A3080 74c42ec11bdb1732f3030911ecfe00f6 576 Gene3D G3DSA:3.10.105.10 288 497 3.4E-48 T 15-10-2018 VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 Gene3D G3DSA:1.10.10.10 1 80 2.7E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 Pfam PF01380 SIS domain 126 254 6.3E-12 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 SUPERFAMILY SSF46689 2 78 2.15E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 2.2E-22 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 Gene3D G3DSA:3.40.50.10490 93 277 1.8E-30 T 15-10-2018 VIBNI_A1504 4b867f29a487f2a7ab25707a0fdd2260 279 SUPERFAMILY SSF53697 94 261 1.94E-26 T 15-10-2018 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 SMART SM00420 9 61 2.8E-14 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 SMART SM01134 73 234 1.6E-56 T 15-10-2018 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 SUPERFAMILY SSF100950 79 234 1.47E-31 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 Pfam PF00455 DeoR C terminal sensor domain 78 233 2.7E-43 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 5.9E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 SUPERFAMILY SSF46785 9 66 3.77E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 3.4E-6 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2883 c4cae8cd7af1aad8375f8be1ad80fbca 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 3.4E-6 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A2810 2d084bc0fb9a01959f0f375b6db52a74 295 Pfam PF01769 Divalent cation transporter 156 285 2.7E-26 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VIBNI_A2810 2d084bc0fb9a01959f0f375b6db52a74 295 SUPERFAMILY SSF161093 113 292 1.96E-44 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VIBNI_A2810 2d084bc0fb9a01959f0f375b6db52a74 295 Gene3D G3DSA:1.10.357.20 107 292 4.0E-51 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Gene3D G3DSA:3.10.50.40 174 273 6.2E-67 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 SUPERFAMILY SSF109998 27 199 3.92E-34 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Gene3D G3DSA:1.10.4030.30 28 274 6.2E-67 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Pfam PF13616 PPIC-type PPIASE domain 279 381 5.2E-23 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Pfam PF13616 PPIC-type PPIASE domain 163 272 1.5E-22 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Hamap MF_01183 Chaperone SurA [surA]. 8 426 31.151 T 15-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 SUPERFAMILY SSF54534 281 382 1.57E-28 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 SUPERFAMILY SSF54534 175 273 2.29E-26 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Gene3D G3DSA:3.10.50.40 277 418 4.4E-38 T 15-10-2018 VIBNI_A2916 92733448560e66a9dd143704589d9b6c 430 Pfam PF09312 SurA N-terminal domain 27 144 2.7E-40 T 15-10-2018 IPR015391 SurA N-terminal VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 SMART SM00450 154 273 1.4E-12 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 SMART SM00450 6 129 4.0E-19 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 SUPERFAMILY SSF52821 4 138 7.07E-36 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 SUPERFAMILY SSF52821 158 276 8.64E-30 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 Gene3D G3DSA:3.40.250.10 1 139 3.6E-41 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 Gene3D G3DSA:3.40.250.10 158 277 5.5E-37 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 Pfam PF00581 Rhodanese-like domain 163 268 1.1E-8 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B1020 1e037ea3a47058cefab7cd5e8b5fcb37 278 Pfam PF00581 Rhodanese-like domain 7 125 6.9E-16 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B0109 9e4210b06003ce51c04ab53674e8c20f 256 Gene3D G3DSA:1.10.3720.10 55 247 3.9E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0109 9e4210b06003ce51c04ab53674e8c20f 256 SUPERFAMILY SSF161098 60 244 1.83E-26 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0109 9e4210b06003ce51c04ab53674e8c20f 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 241 6.6E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3177 736421ca76d325e71bf4bc88e5475507 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 5.6E-65 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VIBNI_A3177 736421ca76d325e71bf4bc88e5475507 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.777 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3177 736421ca76d325e71bf4bc88e5475507 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.7E-76 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3177 736421ca76d325e71bf4bc88e5475507 200 Gene3D G3DSA:3.40.1370.10 5 200 8.2E-70 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3177 736421ca76d325e71bf4bc88e5475507 200 SUPERFAMILY SSF52166 9 199 1.22E-72 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 Gene3D G3DSA:3.30.450.20 17 153 1.2E-23 T 15-10-2018 VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 314 1.8E-39 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 SMART SM00267 145 317 1.1E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 Pfam PF08448 PAS fold 35 144 1.2E-15 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 SMART SM00091 29 96 0.0015 T 15-10-2018 IPR000014 PAS domain VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 152 5.8E-15 T 15-10-2018 IPR000014 PAS domain VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 313 1.9E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 Gene3D G3DSA:3.30.70.270 154 317 4.9E-51 T 15-10-2018 VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 SUPERFAMILY SSF55073 161 315 6.47E-46 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1422 e7462ecea8dc6ccaeb6dfd187b748c07 317 SUPERFAMILY SSF55785 35 147 1.19E-20 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 104 1.1E-6 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 Gene3D G3DSA:1.10.8.60 335 440 1.2E-40 T 15-10-2018 VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 172 329 5.4E-44 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 SUPERFAMILY SSF52540 3 441 8.07E-96 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.186 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.8E-221 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 SMART SM01086 335 429 2.8E-22 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 SMART SM00382 49 332 3.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3608 ae9550c079861e32dd7dfa85f154c921 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 8.6E-6 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 Gene3D G3DSA:2.40.50.100 239 360 4.4E-20 T 15-10-2018 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 Pfam PF00005 ABC transporter 20 161 4.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 Gene3D G3DSA:2.40.50.140 284 346 4.4E-20 T 15-10-2018 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 Gene3D G3DSA:3.40.50.300 2 238 4.2E-73 T 15-10-2018 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 SUPERFAMILY SSF50331 237 361 1.02E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 SMART SM00382 28 219 3.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 Pfam PF08402 TOBE domain 281 353 1.2E-5 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A1909 10bb69eab2b6d20be3a6f20fea5028cc 362 SUPERFAMILY SSF52540 4 244 8.81E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 2.1E-78 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 55.948 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 Gene3D G3DSA:3.90.226.10 3 225 1.3E-83 T 15-10-2018 VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 SUPERFAMILY SSF52096 17 284 1.42E-78 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 Gene3D G3DSA:1.10.12.10 226 276 6.3E-31 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VIBNI_A2412 eda1bee5afefc63d8b4042f84f9d7615 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 4.7E-145 T 15-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 247 4.2E-59 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 Pfam PF13531 Bacterial extracellular solute-binding protein 26 248 4.2E-41 T 15-10-2018 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 PIRSF PIRSF004846 1 252 1.6E-66 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 SUPERFAMILY SSF53850 24 249 1.74E-56 T 15-10-2018 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 Gene3D G3DSA:3.40.190.10 103 214 2.4E-71 T 15-10-2018 VIBNI_B1162 18f8f348d4d7d061e64dc0993d666e67 252 Gene3D G3DSA:3.40.190.10 27 248 2.4E-71 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 3.2E-70 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 Gene3D G3DSA:3.50.50.60 5 315 1.2E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 SUPERFAMILY SSF51905 1 362 1.62E-58 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.5E-212 T 15-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 3.1E-34 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PIRSF PIRSF000350 1 446 1.6E-82 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.3E-65 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 Gene3D G3DSA:3.30.390.30 339 451 6.5E-48 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 SUPERFAMILY SSF55424 337 451 4.3E-36 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 Gene3D G3DSA:3.50.50.60 144 261 1.2E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.3E-29 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.3E-29 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.3E-29 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.3E-29 T 15-10-2018 VIBNI_A3460 a25929f0db06a29784aaed653d95e6f9 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-29 T 15-10-2018 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 SUPERFAMILY SSF82114 174 309 4.36E-47 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 PIRSF PIRSF004491 1 311 8.9E-111 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 Gene3D G3DSA:2.40.30.30 188 310 3.7E-42 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 Pfam PF06574 FAD synthetase 12 167 5.1E-58 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 Gene3D G3DSA:3.40.50.620 1 186 5.0E-63 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 75 1.0E-7 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 SUPERFAMILY SSF52374 14 175 4.22E-36 T 15-10-2018 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 3.0E-110 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 SMART SM00904 183 307 6.5E-65 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VIBNI_A0358 d0ae8ddc7259568d3cf567c84c627e75 311 Pfam PF01687 Riboflavin kinase 184 306 1.6E-39 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VIBNI_A2230 4879322cfbeb236d147c1de03c5ef49f 342 SUPERFAMILY SSF53822 60 217 1.02E-5 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2230 4879322cfbeb236d147c1de03c5ef49f 342 Pfam PF04392 ABC transporter substrate binding protein 60 334 6.5E-39 T 15-10-2018 IPR007487 ABC transporter, substrate-binding protein VIBNI_A2230 4879322cfbeb236d147c1de03c5ef49f 342 Gene3D G3DSA:3.40.50.2300 161 333 8.8E-51 T 15-10-2018 VIBNI_A2230 4879322cfbeb236d147c1de03c5ef49f 342 Gene3D G3DSA:3.40.50.2300 64 312 8.8E-51 T 15-10-2018 VIBNI_A2260 1c487e913e5f46b0472e74e5358a5623 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.438 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VIBNI_A2260 1c487e913e5f46b0472e74e5358a5623 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 207 3.4E-41 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_A2260 1c487e913e5f46b0472e74e5358a5623 228 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 4.6E-92 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VIBNI_A2495 546652b4aea1f41d466349677eca1483 166 Gene3D G3DSA:3.30.910.20 22 166 2.7E-34 T 15-10-2018 IPR024930 Skp domain superfamily VIBNI_A2495 546652b4aea1f41d466349677eca1483 166 PIRSF PIRSF002094 1 166 1.0E-39 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VIBNI_A2495 546652b4aea1f41d466349677eca1483 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 2.1E-26 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VIBNI_A2495 546652b4aea1f41d466349677eca1483 166 SUPERFAMILY SSF111384 23 166 3.92E-30 T 15-10-2018 VIBNI_A2495 546652b4aea1f41d466349677eca1483 166 SMART SM00935 12 166 6.8E-41 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VIBNI_A3289 ba777cf8ea75d669bab7626921971cb4 575 Gene3D G3DSA:1.20.1730.10 21 329 2.9E-35 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily VIBNI_A3289 ba777cf8ea75d669bab7626921971cb4 575 Gene3D G3DSA:1.20.1730.10 348 559 4.0E-27 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily VIBNI_A3289 ba777cf8ea75d669bab7626921971cb4 575 Pfam PF00474 Sodium:solute symporter family 33 296 2.9E-35 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VIBNI_A3289 ba777cf8ea75d669bab7626921971cb4 575 Pfam PF00474 Sodium:solute symporter family 376 491 1.3E-15 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VIBNI_A3289 ba777cf8ea75d669bab7626921971cb4 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 1.4E-258 T 15-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VIBNI_A1101 a44f5441fc2aa8e1fe8658e702c29c49 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 5.8E-16 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A1101 a44f5441fc2aa8e1fe8658e702c29c49 246 SUPERFAMILY SSF161098 11 233 2.75E-38 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1101 a44f5441fc2aa8e1fe8658e702c29c49 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 1.2E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1101 a44f5441fc2aa8e1fe8658e702c29c49 246 Gene3D G3DSA:1.10.3720.10 3 243 1.9E-48 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 SUPERFAMILY SSF47384 406 478 1.51E-6 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 Gene3D G3DSA:1.10.287.130 385 472 9.4E-17 T 15-10-2018 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 605 3.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 584 3.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 3.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 3.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 SMART SM00387 516 626 6.5E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 624 4.5E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 Gene3D G3DSA:3.30.565.10 478 626 1.6E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 Gene3D G3DSA:1.20.1480.50 279 384 1.5E-7 T 15-10-2018 VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 SUPERFAMILY SSF55874 467 623 5.11E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1172 dbe7e63fbcabd3d153b11b2691a992dd 626 SMART SM00304 323 375 1.5E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A0117 3d7c8ef3d762922aa7a7cd7f684bae8a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.613 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VIBNI_A0117 3d7c8ef3d762922aa7a7cd7f684bae8a 243 SUPERFAMILY SSF63892 4 242 2.48E-101 T 15-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VIBNI_A0117 3d7c8ef3d762922aa7a7cd7f684bae8a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 3.6E-105 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VIBNI_A0117 3d7c8ef3d762922aa7a7cd7f684bae8a 243 Gene3D G3DSA:3.20.20.70 1 243 2.1E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0117 3d7c8ef3d762922aa7a7cd7f684bae8a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.8E-99 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VIBNI_B0065 f3d1d9e4b6867b46b617030427f2d445 218 Gene3D G3DSA:3.40.50.1820 2 215 5.2E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0065 f3d1d9e4b6867b46b617030427f2d445 218 Pfam PF02230 Phospholipase/Carboxylesterase 7 214 7.7E-47 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 VIBNI_B0065 f3d1d9e4b6867b46b617030427f2d445 218 SUPERFAMILY SSF53474 3 216 7.91E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 SUPERFAMILY SSF46894 151 213 2.21E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 Gene3D G3DSA:3.40.50.2300 7 145 2.1E-28 T 15-10-2018 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 2.5E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 SMART SM00421 154 211 1.6E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 Gene3D G3DSA:1.10.10.10 148 215 2.2E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 3.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 3.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1623 d3b569d0738b9cfadab17a9555acb440 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 3.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0519 38897e2da3f2f427235dbc1d6fc5aeb7 269 Gene3D G3DSA:1.10.10.10 2 84 3.1E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0519 38897e2da3f2f427235dbc1d6fc5aeb7 269 SUPERFAMILY SSF46785 3 81 1.09E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0519 38897e2da3f2f427235dbc1d6fc5aeb7 269 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 62 3.1E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1272 28b3fac80a689f873d93b2650d59c594 175 SUPERFAMILY SSF52218 1 173 7.62E-37 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B1272 28b3fac80a689f873d93b2650d59c594 175 Pfam PF03358 NADPH-dependent FMN reductase 1 128 3.8E-27 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VIBNI_B1272 28b3fac80a689f873d93b2650d59c594 175 Gene3D G3DSA:3.40.50.360 1 175 6.7E-33 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0109 dc149e6f537d53924553b78eb274385d 204 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 135 186 1.8E-18 T 15-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VIBNI_A0109 dc149e6f537d53924553b78eb274385d 204 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 91 2.6E-33 T 15-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VIBNI_A0109 dc149e6f537d53924553b78eb274385d 204 Gene3D G3DSA:1.10.10.880 2 67 3.2E-24 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VIBNI_A0109 dc149e6f537d53924553b78eb274385d 204 PIRSF PIRSF016938 1 192 7.8E-36 T 15-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VIBNI_A0109 dc149e6f537d53924553b78eb274385d 204 SUPERFAMILY SSF89069 4 67 9.29E-21 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VIBNI_A3251 afa310f185f873f4e8ab57fa5396d2cf 449 PIRSF PIRSF006603 1 445 6.6E-131 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3251 afa310f185f873f4e8ab57fa5396d2cf 449 Pfam PF01554 MatE 245 406 1.2E-22 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3251 afa310f185f873f4e8ab57fa5396d2cf 449 Pfam PF01554 MatE 22 181 1.1E-27 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3251 afa310f185f873f4e8ab57fa5396d2cf 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 6.5E-57 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B1941 bd5ebb11e8a5c2f833d64e7025f695f2 180 Pfam PF01909 Nucleotidyltransferase domain 20 66 8.2E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VIBNI_B1941 bd5ebb11e8a5c2f833d64e7025f695f2 180 Gene3D G3DSA:3.30.460.10 8 132 2.0E-12 T 15-10-2018 VIBNI_B1941 bd5ebb11e8a5c2f833d64e7025f695f2 180 SUPERFAMILY SSF81301 16 85 2.02E-7 T 15-10-2018 VIBNI_B0867 47ca466de38ed4a356e39c75a85762d5 359 Gene3D G3DSA:3.40.190.170 39 342 3.3E-105 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B0867 47ca466de38ed4a356e39c75a85762d5 359 Gene3D G3DSA:3.40.190.10 158 329 3.3E-105 T 15-10-2018 VIBNI_B0867 47ca466de38ed4a356e39c75a85762d5 359 PIRSF PIRSF039026 7 359 6.1E-128 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VIBNI_B0867 47ca466de38ed4a356e39c75a85762d5 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 56 328 2.0E-38 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 3.0E-34 T 15-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 Gene3D G3DSA:2.10.10.20 348 391 2.1E-17 T 15-10-2018 VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 SUPERFAMILY SSF81296 26 217 2.94E-44 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 Gene3D G3DSA:2.70.50.50 26 219 9.2E-59 T 15-10-2018 VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 SMART SM00495 348 391 3.1E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A1256 39fe517199be1f0c6abdf84aa00482b4 391 SUPERFAMILY SSF51055 347 390 6.93E-12 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 23 126 6.8E-17 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 Gene3D G3DSA:3.20.20.120 125 351 3.9E-77 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 SUPERFAMILY SSF51604 127 362 7.73E-69 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 SUPERFAMILY SSF54826 3 128 1.11E-27 T 15-10-2018 VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 SMART SM00922 147 244 8.5E-27 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 Pfam PF13378 Enolase C-terminal domain-like 150 354 8.3E-61 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 Gene3D G3DSA:3.30.390.10 1 124 4.7E-25 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A1209 90b5efe7f3899d4a65923760d56fc036 367 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 194 225 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VIBNI_B1900 5c704328b856329116e13ce6bf05c0d5 135 Pfam PF12680 SnoaL-like domain 15 118 1.7E-23 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_B1900 5c704328b856329116e13ce6bf05c0d5 135 SUPERFAMILY SSF54427 11 130 3.06E-30 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B1900 5c704328b856329116e13ce6bf05c0d5 135 Gene3D G3DSA:3.10.450.50 1 126 1.0E-30 T 15-10-2018 VIBNI_A0017 984c56fb9f9874e769e2fc584a7cabea 251 Gene3D G3DSA:3.60.15.10 1 251 5.5E-63 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A0017 984c56fb9f9874e769e2fc584a7cabea 251 SMART SM00849 36 216 0.008 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0017 984c56fb9f9874e769e2fc584a7cabea 251 Pfam PF12706 Beta-lactamase superfamily domain 64 186 5.4E-17 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0017 984c56fb9f9874e769e2fc584a7cabea 251 SUPERFAMILY SSF56281 1 249 5.24E-35 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A0017 984c56fb9f9874e769e2fc584a7cabea 251 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 248 8.6E-101 T 15-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 Gene3D G3DSA:3.40.50.2300 2 134 1.6E-44 T 15-10-2018 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 SUPERFAMILY SSF46894 136 198 2.85E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 Pfam PF00072 Response regulator receiver domain 9 117 4.9E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 1.7E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 Gene3D G3DSA:1.10.10.10 136 199 2.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 SUPERFAMILY SSF52172 7 156 8.68E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 SMART SM00448 7 117 7.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0953 6201dbd5f2213026add79435df7a0e13 203 SMART SM00421 141 198 9.8E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.2E-40 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 1.2E-175 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.712 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 Gene3D G3DSA:3.30.70.1250 116 237 7.9E-150 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 PIRSF PIRSF001491 1 406 5.8E-160 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 SUPERFAMILY SSF53649 1 406 7.85E-68 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 Gene3D G3DSA:3.40.720.10 3 406 7.9E-150 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A0495 2a4b927529c27b71c60734adb004354c 406 SUPERFAMILY SSF143856 118 234 5.36E-48 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VIBNI_A3693 096541c3affd8d0ffa114f892df7726e 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 310 1.4E-16 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VIBNI_A3693 096541c3affd8d0ffa114f892df7726e 343 Gene3D G3DSA:3.40.50.2000 163 339 3.2E-19 T 15-10-2018 VIBNI_A3693 096541c3affd8d0ffa114f892df7726e 343 SUPERFAMILY SSF53756 2 328 1.51E-59 T 15-10-2018 VIBNI_A3693 096541c3affd8d0ffa114f892df7726e 343 Gene3D G3DSA:3.40.50.2000 1 149 9.6E-27 T 15-10-2018 VIBNI_A2559 5fdf4ebfc0ef14dfc90bed296535c606 352 SUPERFAMILY SSF53756 46 335 4.39E-38 T 15-10-2018 VIBNI_A2559 5fdf4ebfc0ef14dfc90bed296535c606 352 Gene3D G3DSA:3.40.50.2000 41 197 2.2E-15 T 15-10-2018 VIBNI_A2559 5fdf4ebfc0ef14dfc90bed296535c606 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 283 334 5.7E-10 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VIBNI_A2559 5fdf4ebfc0ef14dfc90bed296535c606 352 Gene3D G3DSA:3.40.50.2000 207 350 3.5E-13 T 15-10-2018 VIBNI_A2180 a745caa0eef3b0bef56c91cf79027098 150 Gene3D G3DSA:3.30.310.70 25 147 6.6E-15 T 15-10-2018 IPR035923 TT1751-like domain superfamily VIBNI_A2180 a745caa0eef3b0bef56c91cf79027098 150 SUPERFAMILY SSF103247 24 148 1.26E-35 T 15-10-2018 IPR035923 TT1751-like domain superfamily VIBNI_A2180 a745caa0eef3b0bef56c91cf79027098 150 Pfam PF03625 Domain of unknown function DUF302 56 118 6.0E-17 T 15-10-2018 IPR005180 Domain of unknown function DUF302 VIBNI_B1043 a5a81fbf2f0247db68d878e826cdd8ee 139 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 23 116 3.0E-20 T 15-10-2018 IPR020358 Uncharacterised protein family Y4oB VIBNI_B1043 a5a81fbf2f0247db68d878e826cdd8ee 139 Pfam PF09722 Protein of unknown function (DUF2384) 83 136 8.7E-5 T 15-10-2018 IPR024467 Domain of unknown function DUF2384 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 149 162 1.1E-18 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 1.1E-18 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 103 117 1.1E-18 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 Gene3D G3DSA:3.40.50.150 4 290 2.6E-105 T 15-10-2018 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 64 76 - T 15-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 Pfam PF00145 C-5 cytosine-specific DNA methylase 247 297 5.1E-14 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 203 1.6E-83 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 Gene3D G3DSA:3.90.120.10 176 262 2.6E-105 T 15-10-2018 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 212 1.7E-89 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 278 296 - T 15-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 VIBNI_B1060 a13d054c89414cc103a63363e2de0a54 309 SUPERFAMILY SSF53335 2 297 4.53E-89 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3403 821ad322f9821dd1a2a226075ebe6850 217 Gene3D G3DSA:3.40.50.300 3 202 1.3E-57 T 15-10-2018 VIBNI_A3403 821ad322f9821dd1a2a226075ebe6850 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.461 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VIBNI_A3403 821ad322f9821dd1a2a226075ebe6850 217 SUPERFAMILY SSF52540 6 197 3.85E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3403 821ad322f9821dd1a2a226075ebe6850 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.0E-71 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VIBNI_A3403 821ad322f9821dd1a2a226075ebe6850 217 Pfam PF01926 50S ribosome-binding GTPase 29 147 9.0E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 SUPERFAMILY SSF46689 20 99 6.98E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 1.2E-16 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 15-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 1.3E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 1.3E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3495 ea878c86467142fe7c457cb32528b982 209 Gene3D G3DSA:1.10.357.10 14 209 3.0E-63 T 15-10-2018 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 Gene3D G3DSA:3.40.50.300 2 140 7.0E-25 T 15-10-2018 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 SUPERFAMILY SSF52540 2 141 1.35E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 Pfam PF00265 Thymidine kinase 2 186 1.2E-61 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.787 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 Gene3D G3DSA:3.30.60.20 144 189 6.6E-8 T 15-10-2018 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 15-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 PIRSF PIRSF035805 1 192 3.0E-57 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VIBNI_A2279 5c826b86d0a495d1f2167b3e903e9598 192 SUPERFAMILY SSF57716 142 190 4.18E-17 T 15-10-2018 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.9E-105 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.466 T 15-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 SUPERFAMILY SSF51735 268 559 1.4E-96 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 SUPERFAMILY SSF53223 4 267 4.53E-110 T 15-10-2018 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 5.9E-78 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 SMART SM00919 268 528 1.1E-135 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 Gene3D G3DSA:3.40.50.720 266 562 4.3E-112 T 15-10-2018 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PIRSF PIRSF000106 2 560 2.0E-227 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 SMART SM01274 78 258 9.5E-107 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 Gene3D G3DSA:3.40.50.10380 13 265 1.9E-115 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 144 173 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 180 202 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 405 421 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 84 108 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 295 311 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 239 257 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A1146 9c2963bc9d731ecfde223951102cc930 562 PRINTS PR00072 Malic enzyme signature 264 280 5.6E-73 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_B0838 db9cab88cc27210da16b70923a451ff5 155 PIRSF PIRSF000452 1 148 4.7E-40 T 15-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase VIBNI_B0838 db9cab88cc27210da16b70923a451ff5 155 Pfam PF00583 Acetyltransferase (GNAT) family 22 134 1.7E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0838 db9cab88cc27210da16b70923a451ff5 155 SUPERFAMILY SSF55729 2 141 8.02E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0838 db9cab88cc27210da16b70923a451ff5 155 Gene3D G3DSA:3.40.630.30 1 148 5.7E-34 T 15-10-2018 VIBNI_A0619 24fc704da691c837dfd21288bc7dbc7a 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 4.4E-33 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VIBNI_A0619 24fc704da691c837dfd21288bc7dbc7a 143 Gene3D G3DSA:3.30.530.20 2 143 1.1E-39 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_A0619 24fc704da691c837dfd21288bc7dbc7a 143 SUPERFAMILY SSF55961 1 142 8.56E-35 T 15-10-2018 VIBNI_A3661 de3b22c3f478f51a20c6ec8b0924ea5f 323 SMART SM00854 1 221 4.7E-34 T 15-10-2018 IPR019079 Capsule synthesis protein, CapA VIBNI_A3661 de3b22c3f478f51a20c6ec8b0924ea5f 323 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 20 220 7.3E-41 T 15-10-2018 IPR019079 Capsule synthesis protein, CapA VIBNI_A3661 de3b22c3f478f51a20c6ec8b0924ea5f 323 SUPERFAMILY SSF56300 18 228 1.98E-22 T 15-10-2018 VIBNI_A1260 582ebd14c91ee1468ec6d68fac5eba9e 133 Pfam PF01124 MAPEG family 11 129 3.3E-19 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VIBNI_A1260 582ebd14c91ee1468ec6d68fac5eba9e 133 Gene3D G3DSA:1.20.120.550 6 132 8.0E-20 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_A1260 582ebd14c91ee1468ec6d68fac5eba9e 133 SUPERFAMILY SSF161084 6 130 1.12E-22 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 400 42.453 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 Gene3D G3DSA:3.20.20.140 62 360 2.9E-166 T 15-10-2018 VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 Pfam PF01979 Amidohydrolase family 58 377 4.1E-19 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 TIGRFAM TIGR01224 hutI: imidazolonepropionase 25 399 1.1E-156 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 SUPERFAMILY SSF51556 61 360 3.0E-89 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 Gene3D G3DSA:2.30.40.10 7 397 2.9E-166 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A1179 c88839c7055b4d27ededb13894afd8a7 403 SUPERFAMILY SSF51338 5 401 1.4E-25 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A3782 e14d68d16857ed723208384b4e5186cf 90 Gene3D G3DSA:3.10.20.30 1 89 5.6E-24 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A3782 e14d68d16857ed723208384b4e5186cf 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VIBNI_A3782 e14d68d16857ed723208384b4e5186cf 90 SUPERFAMILY SSF54292 1 87 4.98E-27 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VIBNI_A3782 e14d68d16857ed723208384b4e5186cf 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 79 1.1E-13 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VIBNI_A3539 51af667a98b70a10d4c3650ed8f23bac 153 Gene3D G3DSA:3.40.1550.10 1 153 2.6E-47 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A3539 51af667a98b70a10d4c3650ed8f23bac 153 SUPERFAMILY SSF103039 1 153 4.58E-39 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A3539 51af667a98b70a10d4c3650ed8f23bac 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 9.7E-23 T 15-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 SUPERFAMILY SSF54975 2 89 1.07E-25 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 Pfam PF00708 Acylphosphatase 7 89 1.0E-23 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 PRINTS PR00112 Acylphosphatase signature 5 20 5.8E-5 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 PRINTS PR00112 Acylphosphatase signature 26 51 5.8E-5 T 15-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 Gene3D G3DSA:3.30.70.100 1 90 1.8E-27 T 15-10-2018 VIBNI_A1812 8e1d033723c22bf1d4d75ce375f59c70 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_B0232 e63b238d2667b8b9dcaf374273009cff 363 Gene3D G3DSA:3.10.450.50 11 157 5.1E-17 T 15-10-2018 VIBNI_B0232 e63b238d2667b8b9dcaf374273009cff 363 Pfam PF07366 SnoaL-like polyketide cyclase 220 337 9.4E-12 T 15-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VIBNI_B0232 e63b238d2667b8b9dcaf374273009cff 363 Gene3D G3DSA:3.10.450.50 213 346 1.2E-29 T 15-10-2018 VIBNI_B0232 e63b238d2667b8b9dcaf374273009cff 363 SUPERFAMILY SSF54427 22 162 6.87E-22 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0232 e63b238d2667b8b9dcaf374273009cff 363 SUPERFAMILY SSF54427 220 342 8.23E-27 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 PIRSF PIRSF003128 1 554 2.2E-162 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 SUPERFAMILY SSF52540 1 513 6.65E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 Gene3D G3DSA:3.40.50.300 1 231 5.8E-42 T 15-10-2018 VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 Gene3D G3DSA:3.40.50.300 248 553 7.3E-52 T 15-10-2018 VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.5E-175 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VIBNI_A0626 eefc2cb6880d04b0af1bb4a865e2a8ec 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 2.3E-18 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VIBNI_A3876 574c7a8374cfa6a14c47e23551944e8f 300 Pfam PF01618 MotA/TolQ/ExbB proton channel family 163 265 3.6E-34 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_A3876 574c7a8374cfa6a14c47e23551944e8f 300 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 68 278 7.5E-91 T 15-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 Pfam PF00501 AMP-binding enzyme 9 366 1.9E-50 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 28 455 2.2E-118 T 15-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 SUPERFAMILY SSF56801 7 459 4.45E-82 T 15-10-2018 VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 Gene3D G3DSA:3.40.50.12780 5 363 1.4E-63 T 15-10-2018 VIBNI_A2410 f2acf011bac5c929a19bde955025af3d 470 Gene3D G3DSA:3.30.300.30 364 467 1.0E-12 T 15-10-2018 VIBNI_A1682 02ed46b27914e0b6e6dff299e9f19d55 286 Gene3D G3DSA:1.10.3720.10 45 283 3.1E-51 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1682 02ed46b27914e0b6e6dff299e9f19d55 286 SUPERFAMILY SSF161098 51 274 4.97E-48 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1682 02ed46b27914e0b6e6dff299e9f19d55 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 283 3.4E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SUPERFAMILY SSF52540 441 751 4.46E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SMART SM01086 657 746 3.3E-38 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.3E-24 T 15-10-2018 IPR019489 Clp ATPase, C-terminal VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SUPERFAMILY SSF81923 1 142 3.79E-60 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Gene3D G3DSA:3.40.50.300 443 656 2.6E-75 T 15-10-2018 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Gene3D G3DSA:1.10.8.60 657 756 1.7E-31 T 15-10-2018 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SMART SM00382 210 355 2.8E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SMART SM00382 491 658 2.8E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 SUPERFAMILY SSF52540 172 431 3.64E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.0E-13 T 15-10-2018 IPR004176 Clp, N-terminal VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 4.3E-47 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Gene3D G3DSA:3.40.50.300 160 354 1.7E-62 T 15-10-2018 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 328 1.2E-11 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Gene3D G3DSA:1.10.1780.10 1 143 5.8E-43 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 Gene3D G3DSA:1.10.8.60 355 442 3.7E-35 T 15-10-2018 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 4.9E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 4.9E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 4.9E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 4.9E-36 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 VIBNI_A2129 15da4e016bc1ddd019d3c0c5aff1d702 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 15-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VIBNI_B0029 aae68c30a5fff8811f2103c2a257021c 253 Gene3D G3DSA:2.60.120.200 40 250 2.1E-25 T 15-10-2018 VIBNI_B0029 aae68c30a5fff8811f2103c2a257021c 253 Pfam PF14099 Polysaccharide lyase 36 236 1.1E-16 T 15-10-2018 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 VIBNI_A2631 11bc739beb9b1cf2739f0d5880a08298 397 SUPERFAMILY SSF64518 2 397 1.7E-62 T 15-10-2018 VIBNI_A2631 11bc739beb9b1cf2739f0d5880a08298 397 Gene3D G3DSA:1.20.1330.10 42 226 4.7E-32 T 15-10-2018 VIBNI_A2631 11bc739beb9b1cf2739f0d5880a08298 397 Gene3D G3DSA:1.20.1330.10 266 373 5.6E-12 T 15-10-2018 VIBNI_A2631 11bc739beb9b1cf2739f0d5880a08298 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 8.7E-93 T 15-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VIBNI_A2631 11bc739beb9b1cf2739f0d5880a08298 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 4.1E-10 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A1920 a7975c980755e8d5507ea41426b5dc49 421 Gene3D G3DSA:3.30.450.380 1 166 3.6E-39 T 15-10-2018 VIBNI_A1920 a7975c980755e8d5507ea41426b5dc49 421 SUPERFAMILY SSF52540 53 355 5.34E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1920 a7975c980755e8d5507ea41426b5dc49 421 Pfam PF00437 Type II/IV secretion system protein 71 347 1.4E-81 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A1920 a7975c980755e8d5507ea41426b5dc49 421 Gene3D G3DSA:3.40.50.300 168 412 2.2E-72 T 15-10-2018 VIBNI_A2128 b48b26a49d7d38e8d2c4e64b0c9c7aed 348 Pfam PF00144 Beta-lactamase 47 323 5.3E-29 T 15-10-2018 IPR001466 Beta-lactamase-related VIBNI_A2128 b48b26a49d7d38e8d2c4e64b0c9c7aed 348 SUPERFAMILY SSF56601 7 333 3.49E-67 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2128 b48b26a49d7d38e8d2c4e64b0c9c7aed 348 Gene3D G3DSA:3.40.710.10 19 344 2.7E-68 T 15-10-2018 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Pfam PF01266 FAD dependent oxidoreductase 265 634 1.4E-42 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Gene3D G3DSA:3.50.50.60 265 661 3.2E-135 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 241 2.7E-45 T 15-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Gene3D G3DSA:3.30.9.10 349 571 3.2E-135 T 15-10-2018 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 664 2.0E-153 T 15-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Gene3D G3DSA:3.40.50.150 7 250 3.5E-104 T 15-10-2018 VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 SUPERFAMILY SSF51905 265 662 1.08E-28 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0780 843dc4d83336dd00663c4a08ba41c614 670 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 659 27.424 T 15-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VIBNI_B0881 670903bdf7aee2ed04f9b7f8209f572c 311 Pfam PF01032 FecCD transport family 8 306 1.8E-61 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B0881 670903bdf7aee2ed04f9b7f8209f572c 311 Gene3D G3DSA:1.10.3470.10 1 311 2.2E-58 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0881 670903bdf7aee2ed04f9b7f8209f572c 311 SUPERFAMILY SSF81345 3 306 1.57E-61 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0839 28593338d87286e45255eb809a49f0b1 295 Pfam PF01263 Aldose 1-epimerase 27 291 1.8E-51 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VIBNI_A0839 28593338d87286e45255eb809a49f0b1 295 SUPERFAMILY SSF74650 7 291 1.13E-74 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_A0839 28593338d87286e45255eb809a49f0b1 295 PIRSF PIRSF016020 4 295 7.5E-70 T 15-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VIBNI_A0839 28593338d87286e45255eb809a49f0b1 295 Gene3D G3DSA:2.70.98.10 2 295 7.2E-90 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 SUPERFAMILY SSF46785 2 131 1.64E-35 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.3E-65 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 Pfam PF02082 Transcriptional regulator 1 83 3.6E-28 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.1E-47 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 50.512 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VIBNI_A2788 735b9ba59ea137dac0a9a7f8dcd9dcc0 168 Gene3D G3DSA:1.10.10.10 1 144 9.7E-54 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 Gene3D G3DSA:3.90.1150.10 22 316 7.6E-42 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 202 215 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 334 9.8E-88 T 15-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 SUPERFAMILY SSF53383 14 325 1.38E-41 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 Pfam PF00155 Aminotransferase class I and II 68 318 9.8E-21 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B0516 3d647df6157ba20f9af0ff4a5dd168bc 339 Gene3D G3DSA:3.40.640.10 34 250 7.6E-42 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1180 cf186b20f3990a87d6a300e6f8322ab0 823 Pfam PF02687 FtsX-like permease family 731 811 5.4E-6 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 Gene3D G3DSA:1.20.59.10 1 80 1.4E-18 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 SMART SM00830 9 89 5.1E-30 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 SUPERFAMILY SSF48600 4 88 2.93E-24 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.2E-41 T 15-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 Pfam PF01817 Chorismate mutase type II 9 86 1.6E-21 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 Pfam PF02153 Prephenate dehydrogenase 138 344 5.8E-31 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 SUPERFAMILY SSF48179 242 367 7.14E-41 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 Gene3D G3DSA:1.10.3660.10 248 373 2.4E-49 T 15-10-2018 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 Gene3D G3DSA:3.40.50.720 81 247 8.3E-42 T 15-10-2018 VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 SUPERFAMILY SSF51735 91 237 3.42E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0375 d6c404e74d898979ff575c7b42f29062 375 PIRSF PIRSF001499 1 374 3.4E-177 T 15-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VIBNI_B0636 e70b31d309037473028c17b72c9fffa8 401 Gene3D G3DSA:1.20.1250.20 19 204 1.2E-6 T 15-10-2018 VIBNI_B0636 e70b31d309037473028c17b72c9fffa8 401 SUPERFAMILY SSF103473 20 384 1.57E-36 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0636 e70b31d309037473028c17b72c9fffa8 401 Pfam PF07690 Major Facilitator Superfamily 23 351 1.4E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0636 e70b31d309037473028c17b72c9fffa8 401 Gene3D G3DSA:1.20.1250.20 206 391 9.9E-16 T 15-10-2018 VIBNI_B1925 1c3da6a7cbf15e95b006ac186101e52f 144 Gene3D G3DSA:3.30.530.20 1 144 1.5E-29 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_B1925 1c3da6a7cbf15e95b006ac186101e52f 144 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 130 1.3E-10 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VIBNI_B1925 1c3da6a7cbf15e95b006ac186101e52f 144 SUPERFAMILY SSF55961 2 139 1.28E-18 T 15-10-2018 VIBNI_A1865 977a52d5688fdf48f66a751c09cbd891 302 Gene3D G3DSA:3.40.50.1820 2 298 2.1E-49 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1865 977a52d5688fdf48f66a751c09cbd891 302 SUPERFAMILY SSF53474 29 297 5.36E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1865 977a52d5688fdf48f66a751c09cbd891 302 Pfam PF00561 alpha/beta hydrolase fold 53 169 4.0E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A3562 e25f78fcac0e2381fab2a0e8deaff219 598 Pfam PF13646 HEAT repeats 450 525 2.2E-10 T 15-10-2018 VIBNI_A3562 e25f78fcac0e2381fab2a0e8deaff219 598 SUPERFAMILY SSF48431 339 563 7.06E-21 T 15-10-2018 IPR011030 Lipovitellin-phosvitin complex, superhelical domain Reactome: R-HSA-8866423|Reactome: R-HSA-8963888 VIBNI_A3562 e25f78fcac0e2381fab2a0e8deaff219 598 Gene3D G3DSA:1.25.10.20 314 575 3.2E-15 T 15-10-2018 IPR011030 Lipovitellin-phosvitin complex, superhelical domain Reactome: R-HSA-8866423|Reactome: R-HSA-8963888 VIBNI_A3562 e25f78fcac0e2381fab2a0e8deaff219 598 SMART SM00638 35 560 0.001 T 15-10-2018 IPR001747 Lipid transport protein, N-terminal GO:0005319|GO:0006869 Reactome: R-HSA-8866423|Reactome: R-HSA-8963888 VIBNI_A2221 207fa636d174e4b8bd1e636963f09105 92 Gene3D G3DSA:2.40.240.10 1 92 1.9E-35 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2221 207fa636d174e4b8bd1e636963f09105 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 1.0E-43 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VIBNI_A2221 207fa636d174e4b8bd1e636963f09105 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.631 T 15-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VIBNI_A2221 207fa636d174e4b8bd1e636963f09105 92 SUPERFAMILY SSF50715 1 92 8.72E-29 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VIBNI_A2221 207fa636d174e4b8bd1e636963f09105 92 Pfam PF01386 Ribosomal L25p family 4 89 9.9E-24 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 Gene3D G3DSA:3.40.50.1000 11 199 3.2E-50 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 SUPERFAMILY SSF56784 4 201 1.47E-50 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 Gene3D G3DSA:1.10.150.240 23 93 3.2E-50 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 199 2.3E-51 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 188 3.9E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 194 2.5E-37 T 15-10-2018 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 1.9E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 1.9E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A1505 ff5472e5852c141479367c50d5e84c04 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 1.9E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1705 27f2d2820541b02c2726fef36e910cb4 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 328 2.3E-25 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1705 27f2d2820541b02c2726fef36e910cb4 335 SUPERFAMILY SSF161098 97 311 4.14E-10 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1705 27f2d2820541b02c2726fef36e910cb4 335 Gene3D G3DSA:1.10.3720.10 97 323 9.3E-12 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3825 4b14652f5d7527ba1ad79b92d4ca5c25 183 Gene3D G3DSA:2.160.10.10 3 182 4.1E-56 T 15-10-2018 VIBNI_A3825 4b14652f5d7527ba1ad79b92d4ca5c25 183 SUPERFAMILY SSF51161 5 174 2.5E-46 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A3825 4b14652f5d7527ba1ad79b92d4ca5c25 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 9.3E-8 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3825 4b14652f5d7527ba1ad79b92d4ca5c25 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 40 8.0E-6 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A0246 6bbda3b315d2b2034934562f93b6dc41 348 Gene3D G3DSA:2.130.10.10 2 345 1.2E-85 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A0246 6bbda3b315d2b2034934562f93b6dc41 348 SUPERFAMILY SSF75011 16 340 2.35E-32 T 15-10-2018 VIBNI_A0246 6bbda3b315d2b2034934562f93b6dc41 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 4 341 7.8E-84 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 260 38.943 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 Gene3D G3DSA:3.40.190.80 158 262 1.2E-25 T 15-10-2018 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 Pfam PF00459 Inositol monophosphatase family 6 251 2.1E-50 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 SUPERFAMILY SSF56655 4 266 5.1E-75 T 15-10-2018 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 258 9.9E-103 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 Gene3D G3DSA:3.30.540.10 5 157 5.2E-46 T 15-10-2018 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 2.2E-6 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 2.2E-6 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A3367 7473ebea939500aff91863b2ae026e25 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 2.2E-6 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Gene3D G3DSA:2.40.10.410 291 379 7.2E-33 T 15-10-2018 IPR038165 FlgT, C-terminal domain superfamily VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Gene3D G3DSA:3.30.1660.40 24 113 9.5E-33 T 15-10-2018 IPR038180 FlgT, N-terminal domain superfamily VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 5.2E-26 T 15-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Gene3D G3DSA:3.40.50.10610 114 290 6.4E-46 T 15-10-2018 VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 8.1E-33 T 15-10-2018 IPR032386 Flagellar assembly protein T, middle domain VIBNI_A2650 d8cb028a4155abc7ca913c5bc2327b0e 379 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 302 375 3.2E-24 T 15-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 SUPERFAMILY SSF53335 79 394 3.92E-69 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 398 68.684 T 15-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 SUPERFAMILY SSF88697 3 71 1.37E-16 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 Gene3D G3DSA:3.30.750.80 73 181 2.5E-36 T 15-10-2018 VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 Gene3D G3DSA:2.30.130.10 2 72 7.9E-28 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 SMART SM00359 3 88 2.4E-10 T 15-10-2018 IPR002478 PUA domain GO:0003723 VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 Gene3D G3DSA:3.40.50.150 182 398 5.4E-70 T 15-10-2018 VIBNI_A1814 065191332e2ec801907fcfcb7eb36272 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 377 5.5E-29 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VIBNI_A1801 dfe50fcf459e4ff531c762a4c906f28b 159 Gene3D G3DSA:3.10.129.10 5 147 9.3E-26 T 15-10-2018 VIBNI_A1801 dfe50fcf459e4ff531c762a4c906f28b 159 SUPERFAMILY SSF54637 12 150 3.11E-15 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A1801 dfe50fcf459e4ff531c762a4c906f28b 159 Pfam PF14539 Domain of unknown function (DUF4442) 18 106 1.3E-9 T 15-10-2018 IPR027961 Protein of unknown function DUF4442 VIBNI_B0258 c64a8c55b2ade04ed76a0b38ca58ac1a 324 SUPERFAMILY SSF53474 51 321 7.86E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0258 c64a8c55b2ade04ed76a0b38ca58ac1a 324 Pfam PF02230 Phospholipase/Carboxylesterase 190 234 2.0E-5 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 VIBNI_A2322 2458fc3b4d2dd030a4717a40cfc78412 205 SUPERFAMILY SSF89392 22 198 9.81E-52 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VIBNI_A2322 2458fc3b4d2dd030a4717a40cfc78412 205 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 198 30.392 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VIBNI_A2322 2458fc3b4d2dd030a4717a40cfc78412 205 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 6 199 3.9E-59 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VIBNI_A2322 2458fc3b4d2dd030a4717a40cfc78412 205 Gene3D G3DSA:2.50.20.10 18 199 3.9E-48 T 15-10-2018 VIBNI_A2322 2458fc3b4d2dd030a4717a40cfc78412 205 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 188 6.7E-50 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VIBNI_B1772 30e785cf85be127c1b8f665be86aae0f 432 SUPERFAMILY SSF56925 281 389 8.24E-5 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B1772 30e785cf85be127c1b8f665be86aae0f 432 SUPERFAMILY SSF48317 46 159 5.63E-22 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VIBNI_B1772 30e785cf85be127c1b8f665be86aae0f 432 Pfam PF01569 PAP2 superfamily 65 155 1.1E-8 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_B1772 30e785cf85be127c1b8f665be86aae0f 432 SMART SM00014 63 160 2.5E-7 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_B1772 30e785cf85be127c1b8f665be86aae0f 432 Gene3D G3DSA:1.20.144.10 89 177 7.6E-10 T 15-10-2018 VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 Pfam PF03924 CHASE domain 84 272 2.7E-28 T 15-10-2018 IPR006189 CHASE domain VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 Gene3D G3DSA:3.30.450.350 84 291 3.5E-9 T 15-10-2018 VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 SUPERFAMILY SSF55073 362 511 1.57E-39 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 SMART SM01079 78 274 4.0E-32 T 15-10-2018 IPR006189 CHASE domain VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 512 1.5E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 358 507 4.6E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 Gene3D G3DSA:3.30.70.270 343 513 9.2E-46 T 15-10-2018 VIBNI_A1953 6f69ed35e2ce88e18c40645b87b41294 515 SMART SM00267 346 512 7.9E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 SUPERFAMILY SSF64263 1 119 6.15E-51 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 Gene3D G3DSA:3.90.1030.10 1 117 4.3E-48 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.9E-49 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3152 45064e205b545c92342c7272ed224a02 128 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-34 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2245 21970de14ba640086784f9b2cdb4da59 299 Gene3D G3DSA:3.40.50.620 3 192 4.4E-27 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2245 21970de14ba640086784f9b2cdb4da59 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 9 126 1.8E-9 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VIBNI_A2245 21970de14ba640086784f9b2cdb4da59 299 SUPERFAMILY SSF52402 8 180 1.7E-17 T 15-10-2018 VIBNI_A1188 df97bbdfc532babd49a6a3688109109e 211 Pfam PF01810 LysE type translocator 15 207 6.8E-28 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1188 df97bbdfc532babd49a6a3688109109e 211 PIRSF PIRSF006324 1 210 2.3E-50 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 SUPERFAMILY SSF46785 2 101 3.43E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 Gene3D G3DSA:3.40.190.10 82 280 1.0E-52 T 15-10-2018 VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 Pfam PF03466 LysR substrate binding domain 79 280 1.0E-34 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 Gene3D G3DSA:3.40.190.10 153 254 1.0E-52 T 15-10-2018 VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 55 3.5E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 SUPERFAMILY SSF53850 79 282 1.99E-37 T 15-10-2018 VIBNI_A1011 b16e990db0727d623d721cb3e49db4f6 293 Gene3D G3DSA:1.10.10.10 1 81 1.9E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 Gene3D G3DSA:3.40.50.300 261 497 2.2E-41 T 15-10-2018 VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 SUPERFAMILY SSF52540 273 488 8.46E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 Pfam PF00005 ABC transporter 20 170 4.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 SUPERFAMILY SSF52540 4 226 2.66E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 SMART SM00382 29 224 6.7E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 SMART SM00382 280 474 5.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 Pfam PF00005 ABC transporter 274 426 2.5E-18 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0721 3280b93606eb7dcb64341b9e2217e591 499 Gene3D G3DSA:3.40.50.300 1 245 6.3E-56 T 15-10-2018 VIBNI_A2709 fa715b180068341429e557561122e45a 203 Pfam PF04390 Lipopolysaccharide-assembly 42 162 1.4E-12 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VIBNI_A2709 fa715b180068341429e557561122e45a 203 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 10 167 24.654 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VIBNI_A2709 fa715b180068341429e557561122e45a 203 Gene3D G3DSA:3.30.160.150 22 171 2.0E-48 T 15-10-2018 VIBNI_B1209 2b13f16c7a0b86ff5a1525cb230bf9cf 309 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 3 144 6.9E-6 T 15-10-2018 IPR010520 UPF0255 family VIBNI_B1209 2b13f16c7a0b86ff5a1525cb230bf9cf 309 Gene3D G3DSA:3.40.50.1820 8 289 1.1E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1209 2b13f16c7a0b86ff5a1525cb230bf9cf 309 Gene3D G3DSA:1.10.10.800 144 235 1.1E-63 T 15-10-2018 VIBNI_B1209 2b13f16c7a0b86ff5a1525cb230bf9cf 309 SUPERFAMILY SSF53474 2 306 2.36E-24 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1248 7bb8a1bcbade35c036d6430c285f7f49 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 117 4.0E-6 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B1248 7bb8a1bcbade35c036d6430c285f7f49 121 Gene3D G3DSA:3.10.180.10 1 121 2.4E-14 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1248 7bb8a1bcbade35c036d6430c285f7f49 121 SUPERFAMILY SSF54593 10 119 5.91E-18 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0504 d03c958cf1a80f9e6f1ece090a0618d6 209 SUPERFAMILY SSF53335 6 205 5.53E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0504 d03c958cf1a80f9e6f1ece090a0618d6 209 Pfam PF13649 Methyltransferase domain 43 136 8.8E-18 T 15-10-2018 VIBNI_B0504 d03c958cf1a80f9e6f1ece090a0618d6 209 Gene3D G3DSA:3.40.50.150 37 206 4.2E-33 T 15-10-2018 VIBNI_A0973 52f3e6181b7552bd4b8cead9808b93de 146 Gene3D G3DSA:3.40.50.510 1 144 1.4E-36 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VIBNI_A0973 52f3e6181b7552bd4b8cead9808b93de 146 SUPERFAMILY SSF53062 1 130 4.97E-34 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VIBNI_A0973 52f3e6181b7552bd4b8cead9808b93de 146 Pfam PF03610 PTS system fructose IIA component 4 116 2.2E-29 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VIBNI_B1371 da3038006ae93fbb1ff62a4f4dd441f8 285 Gene3D G3DSA:3.40.50.1820 18 282 2.4E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1371 da3038006ae93fbb1ff62a4f4dd441f8 285 SUPERFAMILY SSF53474 23 276 7.26E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1371 da3038006ae93fbb1ff62a4f4dd441f8 285 Pfam PF00756 Putative esterase 34 198 5.1E-21 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:1.10.10.160 110 200 1.4E-80 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF13361 UvrD-like helicase C-terminal domain 291 425 3.0E-7 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 505 672 1.9E-15 T 15-10-2018 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF12705 PD-(D/E)XK nuclease superfamily 708 948 7.4E-23 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.90.320.10 673 895 3.8E-10 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF13361 UvrD-like helicase C-terminal domain 519 655 7.6E-7 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 SUPERFAMILY SSF52540 5 673 2.01E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 SUPERFAMILY SSF52980 732 890 1.45E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 282 2.0E-65 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 294 425 1.5E-6 T 15-10-2018 VIBNI_B1961 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 5 283 1.4E-80 T 15-10-2018 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:1.10.10.160 110 200 1.4E-80 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF13361 UvrD-like helicase C-terminal domain 291 425 3.0E-7 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 505 672 1.9E-15 T 15-10-2018 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF12705 PD-(D/E)XK nuclease superfamily 708 948 7.4E-23 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.90.320.10 673 895 3.8E-10 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF13361 UvrD-like helicase C-terminal domain 519 655 7.6E-7 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 SUPERFAMILY SSF52540 5 673 2.01E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 SUPERFAMILY SSF52980 732 890 1.45E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 282 2.0E-65 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 294 425 1.5E-6 T 15-10-2018 VIBNI_A0346 97a0e163e43799835d70f6aa4cfe285e 956 Gene3D G3DSA:3.40.50.300 5 283 1.4E-80 T 15-10-2018 VIBNI_B0177 b00e31e42b656a22478bc452d0f2a012 183 SUPERFAMILY SSF143081 14 177 8.24E-41 T 15-10-2018 IPR036590 SOS response associated peptidase-like VIBNI_B0177 b00e31e42b656a22478bc452d0f2a012 183 Pfam PF02586 SOS response associated peptidase (SRAP) 42 181 3.2E-29 T 15-10-2018 IPR003738 SOS response associated peptidase (SRAP) VIBNI_B0177 b00e31e42b656a22478bc452d0f2a012 183 Gene3D G3DSA:3.90.1680.10 2 183 1.4E-38 T 15-10-2018 IPR036590 SOS response associated peptidase-like VIBNI_A1533 2f18a4dd04071fda647846a1729c25c8 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 122 1.2E-6 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_A1533 2f18a4dd04071fda647846a1729c25c8 203 Gene3D G3DSA:2.30.110.10 21 147 9.9E-17 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_A1533 2f18a4dd04071fda647846a1729c25c8 203 SUPERFAMILY SSF50475 29 152 1.62E-8 T 15-10-2018 VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 SUPERFAMILY SSF50891 91 220 7.96E-43 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 199 7.7E-66 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 8 212 2.9E-52 T 15-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 Gene3D G3DSA:3.30.1360.40 1 79 7.9E-16 T 15-10-2018 VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 SUPERFAMILY SSF160467 2 95 1.7E-15 T 15-10-2018 VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 Gene3D G3DSA:2.40.100.10 89 227 6.2E-53 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B1853 feda0d745b190303279c10087ae7e5bc 230 SMART SM00796 1 204 3.6E-82 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_A0394 78b39b7002376be278072509976493e6 443 Pfam PF01618 MotA/TolQ/ExbB proton channel family 304 423 1.7E-31 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_A0394 78b39b7002376be278072509976493e6 443 PIRSF PIRSF037714 1 443 9.9E-137 T 15-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 SUPERFAMILY SSF103088 59 185 3.01E-28 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 Gene3D G3DSA:3.30.1330.60 61 185 2.2E-27 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 Pfam PF00691 OmpA family 85 180 1.9E-17 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 PRINTS PR01021 OMPA domain signature 116 131 3.5E-7 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 PRINTS PR01021 OMPA domain signature 86 108 3.5E-7 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1821 d171291b5719c46d128a2ded9a94584c 205 PRINTS PR01021 OMPA domain signature 131 147 3.5E-7 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A2828 bb841399f81d9dbd3bd8e487afe2d726 294 Gene3D G3DSA:3.30.420.40 4 114 1.0E-66 T 15-10-2018 VIBNI_A2828 bb841399f81d9dbd3bd8e487afe2d726 294 SUPERFAMILY SSF53067 114 283 2.22E-42 T 15-10-2018 VIBNI_A2828 bb841399f81d9dbd3bd8e487afe2d726 294 Gene3D G3DSA:3.30.420.40 115 261 1.0E-66 T 15-10-2018 VIBNI_A2828 bb841399f81d9dbd3bd8e487afe2d726 294 SUPERFAMILY SSF53067 1 112 1.59E-24 T 15-10-2018 VIBNI_A2828 bb841399f81d9dbd3bd8e487afe2d726 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 4.3E-44 T 15-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 SUPERFAMILY SSF118215 12 398 2.88E-125 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 Pfam PF00375 Sodium:dicarboxylate symporter family 12 397 1.1E-135 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 39 54 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 Gene3D G3DSA:1.10.3860.10 6 409 6.5E-143 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 6.0E-36 T 15-10-2018 VIBNI_B0122 b87d4b480f5528f5b06d221efb561ec6 409 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site VIBNI_A3634 b1616fc5eac952b79b8f74cb8a757a5d 186 Pfam PF02397 Bacterial sugar transferase 6 176 6.2E-49 T 15-10-2018 IPR003362 Bacterial sugar transferase VIBNI_A1808 fee16c8e030e25c9db88622141b8fcf2 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 1.1E-21 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A1808 fee16c8e030e25c9db88622141b8fcf2 365 Gene3D G3DSA:1.10.3720.10 147 363 7.7E-49 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1808 fee16c8e030e25c9db88622141b8fcf2 365 SUPERFAMILY SSF161098 154 346 2.49E-41 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1808 fee16c8e030e25c9db88622141b8fcf2 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 8.6E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1293 e15126bf5d3c5ab28fedb279ff53df4f 772 PIRSF PIRSF007519 7 771 9.7E-256 T 15-10-2018 IPR012300 Peptidase M6, InhA VIBNI_A1293 e15126bf5d3c5ab28fedb279ff53df4f 772 SUPERFAMILY SSF55486 228 404 4.55E-17 T 15-10-2018 VIBNI_A1293 e15126bf5d3c5ab28fedb279ff53df4f 772 Pfam PF05547 Immune inhibitor A peptidase M6 122 765 1.6E-225 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_A1293 e15126bf5d3c5ab28fedb279ff53df4f 772 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 137 454 1.7E-75 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 SUPERFAMILY SSF52540 5 241 5.47E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 SUPERFAMILY SSF50331 236 349 2.67E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 Gene3D G3DSA:2.40.50.140 278 332 1.2E-25 T 15-10-2018 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 SMART SM00382 28 211 7.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 Pfam PF00005 ABC transporter 20 161 1.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 Gene3D G3DSA:2.40.50.940 222 341 1.2E-25 T 15-10-2018 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 Gene3D G3DSA:3.40.50.300 3 221 3.5E-67 T 15-10-2018 VIBNI_A1289 e0aa4e9abb48621dfbefc634c7f3dd08 361 Pfam PF08402 TOBE domain 271 340 3.0E-6 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 SUPERFAMILY SSF51230 519 593 5.5E-20 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 SUPERFAMILY SSF89000 297 458 1.57E-50 T 15-10-2018 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 Gene3D G3DSA:3.20.20.70 1 462 8.2E-173 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 1.2E-267 T 15-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 Pfam PF00682 HMGL-like 6 270 4.6E-60 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 Pfam PF00364 Biotin-requiring enzyme 522 592 1.7E-17 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 SUPERFAMILY SSF51569 1 300 3.85E-90 T 15-10-2018 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 Gene3D G3DSA:2.40.50.100 520 594 1.5E-22 T 15-10-2018 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A0153 9bf7c0bf8b8578a53f1eba4460342bde 594 Pfam PF02436 Conserved carboxylase domain 292 494 5.1E-57 T 15-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VIBNI_A3881 1a2c3b3b482bc988027b366ab86b57d1 500 Gene3D G3DSA:2.60.40.10 270 361 1.7E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3881 1a2c3b3b482bc988027b366ab86b57d1 500 Gene3D G3DSA:2.60.40.10 48 153 9.6E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3881 1a2c3b3b482bc988027b366ab86b57d1 500 Gene3D G3DSA:2.60.40.10 155 241 8.4E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 SUPERFAMILY SSF69075 315 416 1.03E-27 T 15-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Gene3D G3DSA:3.40.50.720 159 311 1.8E-44 T 15-10-2018 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.4E-48 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.4E-51 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 2.7E-23 T 15-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 SUPERFAMILY SSF69742 1 156 5.23E-48 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.739 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 Gene3D G3DSA:3.30.460.30 1 156 4.7E-57 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 SUPERFAMILY SSF51735 160 313 2.52E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 15-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 PIRSF PIRSF000445 1 418 2.8E-157 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A2681 bb43401f3303e374885f82d9e637ac00 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.0E-146 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_B0391 4a8ebdc1305bd8136707236c83f53b31 139 Gene3D G3DSA:3.40.630.30 1 138 2.0E-32 T 15-10-2018 VIBNI_B0391 4a8ebdc1305bd8136707236c83f53b31 139 Pfam PF13673 Acetyltransferase (GNAT) domain 34 137 4.7E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0391 4a8ebdc1305bd8136707236c83f53b31 139 SUPERFAMILY SSF55729 1 137 4.91E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 Gene3D G3DSA:3.90.1580.10 185 461 5.3E-26 T 15-10-2018 VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 Gene3D G3DSA:3.40.50.150 489 703 2.9E-25 T 15-10-2018 VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 Pfam PF12867 DinB superfamily 30 165 9.6E-9 T 15-10-2018 IPR024775 DinB-like domain VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 SUPERFAMILY SSF56436 194 449 2.59E-56 T 15-10-2018 IPR016187 C-type lectin fold VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 11 448 2.6E-205 T 15-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 Pfam PF13847 Methyltransferase domain 504 642 6.0E-11 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 SUPERFAMILY SSF53335 461 687 2.26E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 463 703 9.6E-104 T 15-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain VIBNI_A0257 4735b26834d1918187d1f6358bc16742 704 Pfam PF03781 Sulfatase-modifying factor enzyme 1 197 448 3.4E-26 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VIBNI_B1401 02ed156034bc1c206b2ca00c31f6e438 292 Gene3D G3DSA:1.10.3720.10 51 290 1.1E-47 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1401 02ed156034bc1c206b2ca00c31f6e438 292 SUPERFAMILY SSF161098 53 277 2.75E-43 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1401 02ed156034bc1c206b2ca00c31f6e438 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 287 5.2E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1421 0a0e7ccbbb92db1164783f8fa1a8b30d 286 Pfam PF03280 Proteobacterial lipase chaperone protein 91 272 7.2E-42 T 15-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VIBNI_B1421 0a0e7ccbbb92db1164783f8fa1a8b30d 286 SUPERFAMILY SSF158855 38 284 1.44E-53 T 15-10-2018 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 Gene3D G3DSA:3.40.30.10 1 108 3.1E-36 T 15-10-2018 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 PIRSF PIRSF000077 2 108 2.4E-43 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 15-10-2018 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 15-10-2018 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 15-10-2018 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 SUPERFAMILY SSF52833 3 106 1.79E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.7E-38 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VIBNI_A3786 5f66ad01259c295772d210bffadee7f3 108 Pfam PF00085 Thioredoxin 5 106 1.0E-33 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 VIBNI_A1300 a7eb91c7eb7066005bb6939d797429c8 364 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 60 326 1.6E-67 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VIBNI_A1300 a7eb91c7eb7066005bb6939d797429c8 364 Gene3D G3DSA:3.40.630.10 28 329 2.7E-89 T 15-10-2018 VIBNI_A1300 a7eb91c7eb7066005bb6939d797429c8 364 SUPERFAMILY SSF53187 31 328 6.95E-73 T 15-10-2018 VIBNI_A1300 a7eb91c7eb7066005bb6939d797429c8 364 PIRSF PIRSF039012 14 334 1.1E-89 T 15-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VIBNI_B0340 17f40bc110658bceb42f3c3cf832234b 587 Pfam PF05947 Type VI secretion system, TssF 5 586 4.4E-187 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_B0340 17f40bc110658bceb42f3c3cf832234b 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 587 7.4E-188 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_B0340 17f40bc110658bceb42f3c3cf832234b 587 PIRSF PIRSF028304 2 587 6.1E-173 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_A1663 55cbef41642a7eda21f3c10ce4592f4e 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.4E-41 T 15-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VIBNI_A2249 3bcbaddeed19ce5fda3b8a7ebf272451 149 Pfam PF06610 L-alanine exporter 8 142 1.6E-65 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VIBNI_A2249 3bcbaddeed19ce5fda3b8a7ebf272451 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 4.0E-55 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VIBNI_A2249 3bcbaddeed19ce5fda3b8a7ebf272451 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 29.583 T 15-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 243 8.5E-9 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 Gene3D G3DSA:3.30.360.10 126 364 7.6E-37 T 15-10-2018 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 Gene3D G3DSA:3.40.50.720 1 125 1.1E-23 T 15-10-2018 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 SUPERFAMILY SSF55347 129 276 6.54E-27 T 15-10-2018 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 122 1.0E-19 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A3796 70c679f888d2edc7f0582969465b4787 369 SUPERFAMILY SSF51735 3 169 1.41E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.689 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 SUPERFAMILY SSF46689 8 98 3.63E-25 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 Gene3D G3DSA:1.10.10.60 1 98 7.7E-33 T 15-10-2018 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PIRSF PIRSF002097 1 98 2.0E-44 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-32 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-32 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-32 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-32 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A3307 c6fe1346dd29e6a6f08fc1a7ef4f0465 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 PIRSF PIRSF038971 1 378 1.2E-137 T 15-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 SUPERFAMILY SSF51556 49 344 2.21E-18 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 SUPERFAMILY SSF51338 2 378 9.79E-10 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 Gene3D G3DSA:3.20.20.140 1 139 3.5E-7 T 15-10-2018 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 376 3.3E-148 T 15-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 Pfam PF01979 Amidohydrolase family 211 376 6.5E-12 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A0019 936a021627bfcd8cd6de192de03ee15a 378 Gene3D G3DSA:2.30.40.10 309 378 6.0E-9 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_B0960 7e8bb79c5e70da0a7a97d38d551c3588 434 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 192 431 5.7E-64 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VIBNI_B0960 7e8bb79c5e70da0a7a97d38d551c3588 434 Gene3D G3DSA:1.10.3720.10 208 434 1.3E-32 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0960 7e8bb79c5e70da0a7a97d38d551c3588 434 SUPERFAMILY SSF161098 206 416 1.31E-34 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0960 7e8bb79c5e70da0a7a97d38d551c3588 434 Pfam PF11812 Domain of unknown function (DUF3333) 18 168 3.8E-47 T 15-10-2018 IPR024573 Domain of unknown function DUF3333 VIBNI_B0960 7e8bb79c5e70da0a7a97d38d551c3588 434 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 232 433 1.3E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1167 4b2ded5cc3520fbf5fa2c96e747bb2fe 227 PIRSF PIRSF028111 1 227 4.2E-84 T 15-10-2018 IPR016868 Bacteriophage B3, Orf5 VIBNI_A1167 4b2ded5cc3520fbf5fa2c96e747bb2fe 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 15-10-2018 IPR024498 Domain of unknown function DUF2786 VIBNI_B0653 e1ba6008b7b8fe3fa1d93b48ecfa6fbb 291 SUPERFAMILY SSF74650 3 289 2.32E-49 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_B0653 e1ba6008b7b8fe3fa1d93b48ecfa6fbb 291 Gene3D G3DSA:2.70.98.10 2 288 9.4E-67 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_B0653 e1ba6008b7b8fe3fa1d93b48ecfa6fbb 291 Pfam PF01263 Aldose 1-epimerase 15 285 2.9E-38 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 Gene3D G3DSA:2.40.50.100 239 359 2.4E-21 T 15-10-2018 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 Gene3D G3DSA:2.40.50.140 283 346 2.4E-21 T 15-10-2018 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 Gene3D G3DSA:3.40.50.300 1 238 2.0E-77 T 15-10-2018 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 Pfam PF00005 ABC transporter 20 161 1.6E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 SUPERFAMILY SSF50331 236 361 4.62E-24 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 SUPERFAMILY SSF52540 4 242 1.49E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 Pfam PF08402 TOBE domain 280 353 6.3E-7 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B0413 994317b1961929be605f1c65da5fab62 375 SMART SM00382 28 211 1.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 3.2E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 SUPERFAMILY SSF48498 98 167 2.74E-8 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 4.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 4.9E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 Gene3D G3DSA:1.10.357.10 1 178 1.6E-50 T 15-10-2018 VIBNI_A0985 c225fde941a273b6d72c66f48997a265 181 SUPERFAMILY SSF46689 3 75 3.29E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2462 dfbddd541356e1a5a810f1dabb3868c5 428 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 254 7.5E-67 T 15-10-2018 IPR018642 Protein of unknown function DUF2066 VIBNI_A0176 47e14f850ae1c1d72ce86d2a061b3b28 156 Gene3D G3DSA:3.30.700.10 13 156 6.5E-23 T 15-10-2018 VIBNI_A0176 47e14f850ae1c1d72ce86d2a061b3b28 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A0176 47e14f850ae1c1d72ce86d2a061b3b28 156 SUPERFAMILY SSF54523 13 113 1.78E-19 T 15-10-2018 VIBNI_A0176 47e14f850ae1c1d72ce86d2a061b3b28 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 6.0E-11 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A0176 47e14f850ae1c1d72ce86d2a061b3b28 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 5.5E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-16 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 SUPERFAMILY SSF116842 2 72 1.7E-21 T 15-10-2018 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 Pfam PF02609 Exonuclease VII small subunit 11 61 1.9E-19 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 PIRSF PIRSF006488 1 81 2.3E-22 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 66 9.7E-22 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.473 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A0665 6b5cf61c2c92e64ed86355676d58a869 81 Gene3D G3DSA:1.10.287.1040 4 81 1.1E-24 T 15-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VIBNI_A2406 d957addd4e877f02786eacec2e7bddd7 290 Pfam PF04280 Tim44-like domain 168 290 1.2E-15 T 15-10-2018 IPR007379 Tim44-like domain VIBNI_A2406 d957addd4e877f02786eacec2e7bddd7 290 Gene3D G3DSA:3.10.450.240 165 290 1.2E-7 T 15-10-2018 VIBNI_A2406 d957addd4e877f02786eacec2e7bddd7 290 SUPERFAMILY SSF54427 169 289 8.76E-17 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A2406 d957addd4e877f02786eacec2e7bddd7 290 SMART SM00978 159 290 7.0E-36 T 15-10-2018 IPR007379 Tim44-like domain VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 Gene3D G3DSA:3.40.50.180 186 375 1.4E-64 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 SMART SM00448 3 126 3.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 PIRSF PIRSF000876 1 377 4.4E-128 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 SUPERFAMILY SSF52172 3 109 1.71E-26 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 SUPERFAMILY SSF52738 188 373 1.44E-62 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 Pfam PF01339 CheB methylesterase 194 371 1.6E-58 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 Pfam PF00072 Response regulator receiver domain 5 109 1.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 377 39.091 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_A0746 6ac3006ea2a00d7af3b1856b4ab6121d 379 Gene3D G3DSA:3.40.50.2300 2 136 2.5E-31 T 15-10-2018 VIBNI_B1354 ba1aa247667e2877682e1b3aeb369d30 604 SUPERFAMILY SSF53850 50 593 3.8E-115 T 15-10-2018 VIBNI_B1354 ba1aa247667e2877682e1b3aeb369d30 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 503 1.4E-76 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B1354 ba1aa247667e2877682e1b3aeb369d30 604 Gene3D G3DSA:3.10.105.10 312 570 7.3E-221 T 15-10-2018 VIBNI_B1354 ba1aa247667e2877682e1b3aeb369d30 604 PIRSF PIRSF002741 25 595 8.9E-127 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_B1354 ba1aa247667e2877682e1b3aeb369d30 604 Gene3D G3DSA:3.40.190.10 32 590 7.3E-221 T 15-10-2018 VIBNI_A2207 9015a1da15b224facadcb08739a5f258 459 PIRSF PIRSF006603 3 458 1.1E-56 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A2207 9015a1da15b224facadcb08739a5f258 459 Pfam PF01554 MatE 26 186 2.6E-26 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A2207 9015a1da15b224facadcb08739a5f258 459 Pfam PF01554 MatE 253 414 2.8E-17 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A2207 9015a1da15b224facadcb08739a5f258 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 424 5.4E-59 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 7.4E-86 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 Gene3D G3DSA:2.40.420.20 269 337 3.2E-67 T 15-10-2018 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 SUPERFAMILY SSF111369 48 264 8.37E-37 T 15-10-2018 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 Gene3D G3DSA:2.40.30.170 45 268 3.2E-67 T 15-10-2018 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 Gene3D G3DSA:1.10.287.470 93 152 3.2E-67 T 15-10-2018 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 Gene3D G3DSA:2.40.50.100 58 186 3.2E-67 T 15-10-2018 VIBNI_A0932 c9e1304252f493c7c569ec2b15ce3b08 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 6.4E-29 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_A3107 ea443616258b7b849400bf33cbc85b2d 89 Pfam PF11747 Killing trait 7 73 5.2E-24 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 SUPERFAMILY SSF52540 3 210 1.01E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 Pfam PF02223 Thymidylate kinase 9 199 7.5E-56 T 15-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 15-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 199 1.1E-60 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 Gene3D G3DSA:3.40.50.300 4 211 6.7E-65 T 15-10-2018 VIBNI_A2356 ff7bd53d5891eea67d032c47ed255307 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.673 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VIBNI_A3465 eb02d1558347f5392a2e8c1bd834af71 405 Gene3D G3DSA:3.40.630.10 28 371 4.6E-46 T 15-10-2018 VIBNI_A3465 eb02d1558347f5392a2e8c1bd834af71 405 Pfam PF05343 M42 glutamyl aminopeptidase 70 370 7.0E-40 T 15-10-2018 IPR008007 Peptidase M42 VIBNI_A3465 eb02d1558347f5392a2e8c1bd834af71 405 Gene3D G3DSA:2.40.30.40 90 195 4.6E-46 T 15-10-2018 IPR023367 Peptidase M42, domain 2 VIBNI_A3465 eb02d1558347f5392a2e8c1bd834af71 405 SUPERFAMILY SSF53187 20 380 1.91E-37 T 15-10-2018 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 Gene3D G3DSA:3.40.50.10750 142 302 1.5E-125 T 15-10-2018 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 325 1.1E-110 T 15-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 PIRSF PIRSF000428 1 332 2.7E-110 T 15-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 326 4.0E-117 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 SUPERFAMILY SSF53659 2 329 2.84E-91 T 15-10-2018 VIBNI_B0182 91678002dbab89447e6f930cce9b17f3 332 Gene3D G3DSA:3.40.50.10950 10 329 1.5E-125 T 15-10-2018 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.4E-43 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 7.1E-144 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 PIRSF PIRSF000429 1 401 5.0E-126 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 SUPERFAMILY SSF53901 272 400 1.36E-36 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.2E-98 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 SUPERFAMILY SSF53901 4 270 1.97E-84 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 Gene3D G3DSA:3.40.47.10 126 398 1.5E-146 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 Gene3D G3DSA:3.40.47.10 6 276 1.5E-146 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B1306 e68a4d51bb75e8db9d1d06fa621e534c 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 VIBNI_A0478 403405576b790fdbbb2c2ff197b65444 330 SUPERFAMILY SSF52518 10 322 1.22E-85 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0478 403405576b790fdbbb2c2ff197b65444 330 Pfam PF00676 Dehydrogenase E1 component 30 313 1.3E-72 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VIBNI_A0478 403405576b790fdbbb2c2ff197b65444 330 Gene3D G3DSA:3.40.50.970 2 329 1.6E-106 T 15-10-2018 VIBNI_B1242 45841a48e7e655574f1b207944f4d960 540 Pfam PF08774 VRR-NUC domain 433 534 4.2E-22 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VIBNI_B1242 45841a48e7e655574f1b207944f4d960 540 SMART SM00990 426 536 1.5E-25 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VIBNI_B1242 45841a48e7e655574f1b207944f4d960 540 SUPERFAMILY SSF52980 484 524 7.64E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_B1242 45841a48e7e655574f1b207944f4d960 540 Gene3D G3DSA:3.40.1350.10 467 539 1.6E-10 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.0E-38 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 Gene3D G3DSA:1.10.1060.10 10 145 2.1E-34 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 Gene3D G3DSA:3.50.50.60 244 398 1.3E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 2.7E-25 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 Gene3D G3DSA:3.50.50.60 146 243 7.4E-10 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 SUPERFAMILY SSF51971 145 399 4.94E-69 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-36 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.1E-36 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.1E-36 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-36 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-36 T 15-10-2018 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 SUPERFAMILY SSF46548 6 157 2.98E-40 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A0276 ad16ae2387d3eb2dd7eae486826ef3b2 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 8.3E-250 T 15-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VIBNI_A0905 d87edfecb264651e72c6f2a5d70c88a4 208 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 193 26.696 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VIBNI_A0905 d87edfecb264651e72c6f2a5d70c88a4 208 Pfam PF04205 FMN-binding domain 99 187 1.8E-19 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VIBNI_A0905 d87edfecb264651e72c6f2a5d70c88a4 208 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 192 1.7E-64 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VIBNI_A0905 d87edfecb264651e72c6f2a5d70c88a4 208 PIRSF PIRSF006091 1 203 1.2E-73 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VIBNI_A0905 d87edfecb264651e72c6f2a5d70c88a4 208 SMART SM00900 99 191 3.8E-35 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VIBNI_A2922 5d83aeab6d55319dbb087bbd17eef5e0 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 4.1E-34 T 15-10-2018 IPR024528 Threonine/Serine exporter, ThrE VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 SUPERFAMILY SSF48498 78 201 2.76E-39 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 Gene3D G3DSA:1.10.357.10 59 201 1.4E-46 T 15-10-2018 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 3.2E-15 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 SUPERFAMILY SSF46689 3 73 1.54E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 Gene3D G3DSA:1.10.10.60 7 58 5.4E-17 T 15-10-2018 VIBNI_B1439 6d9ff7fea81d1041fbe3c89a8dd5c8f2 207 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 6.7E-53 T 15-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 VIBNI_A1121 90285e060d3fe33fa7af04ce318b344a 285 Pfam PF00005 ABC transporter 31 180 1.8E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1121 90285e060d3fe33fa7af04ce318b344a 285 Gene3D G3DSA:3.40.50.300 2 284 4.5E-87 T 15-10-2018 VIBNI_A1121 90285e060d3fe33fa7af04ce318b344a 285 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1121 90285e060d3fe33fa7af04ce318b344a 285 SUPERFAMILY SSF52540 9 253 1.22E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1121 90285e060d3fe33fa7af04ce318b344a 285 SMART SM00382 39 239 1.8E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3656 cd2732167f14ca9237fa670b0272d705 275 SUPERFAMILY SSF53448 3 217 1.69E-33 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3656 cd2732167f14ca9237fa670b0272d705 275 Pfam PF00535 Glycosyl transferase family 2 13 133 1.1E-17 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A3656 cd2732167f14ca9237fa670b0272d705 275 Gene3D G3DSA:3.90.550.10 1 228 1.8E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 9.0E-12 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 Gene3D G3DSA:3.20.20.80 116 550 2.9E-148 T 15-10-2018 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 647 5.5E-206 T 15-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 Gene3D G3DSA:2.60.40.10 2 115 1.5E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 SMART SM00642 145 539 1.1E-4 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 Pfam PF00128 Alpha amylase, catalytic domain 167 249 7.9E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 SUPERFAMILY SSF51445 112 541 5.93E-100 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 SUPERFAMILY SSF51011 556 647 3.31E-12 T 15-10-2018 VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 Gene3D G3DSA:2.60.40.1180 555 649 4.4E-8 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta VIBNI_B1577 e594b0466aad27da6b4b445e58ba2a07 649 SUPERFAMILY SSF81296 7 124 6.77E-20 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B1945 b8c36633c4eac127f902f911aac6f53f 108 Gene3D G3DSA:3.30.70.120 1 105 3.4E-19 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_B1945 b8c36633c4eac127f902f911aac6f53f 108 SUPERFAMILY SSF102705 2 103 3.37E-10 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VIBNI_A0371 7fca5f2de49dd92efc17278b230deced 328 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 44.416 T 15-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_A0371 7fca5f2de49dd92efc17278b230deced 328 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VIBNI_A0371 7fca5f2de49dd92efc17278b230deced 328 SUPERFAMILY SSF51445 2 283 4.53E-85 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0371 7fca5f2de49dd92efc17278b230deced 328 Gene3D G3DSA:3.20.20.300 1 328 2.4E-124 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VIBNI_A0371 7fca5f2de49dd92efc17278b230deced 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 288 6.0E-84 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VIBNI_B0513 efa7bed3af4e037157f004dceac6f5cc 224 SMART SM00418 7 86 2.1E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B0513 efa7bed3af4e037157f004dceac6f5cc 224 Gene3D G3DSA:1.10.10.10 3 91 2.5E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0513 efa7bed3af4e037157f004dceac6f5cc 224 SUPERFAMILY SSF46785 1 114 7.31E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0513 efa7bed3af4e037157f004dceac6f5cc 224 Pfam PF12840 Helix-turn-helix domain 8 66 2.5E-9 T 15-10-2018 VIBNI_B1183 980d51ac1ca483d696b9ab5e1801b042 381 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 4 81 8.3E-29 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_B1183 980d51ac1ca483d696b9ab5e1801b042 381 Gene3D G3DSA:3.40.50.720 1 380 2.8E-148 T 15-10-2018 VIBNI_B1183 980d51ac1ca483d696b9ab5e1801b042 381 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 85 318 7.2E-95 T 15-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_B1183 980d51ac1ca483d696b9ab5e1801b042 381 Pfam PF07055 Enoyl reductase FAD binding domain 324 376 3.5E-16 T 15-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_B1183 980d51ac1ca483d696b9ab5e1801b042 381 SUPERFAMILY SSF51735 42 145 1.57E-5 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 Gene3D G3DSA:3.90.1260.10 68 356 3.1E-146 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 Gene3D G3DSA:3.40.50.620 9 177 3.1E-146 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 SUPERFAMILY SSF69864 177 401 3.14E-87 T 15-10-2018 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 Gene3D G3DSA:1.20.5.470 368 403 5.1E-7 T 15-10-2018 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 9.2E-137 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.819 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 SUPERFAMILY SSF52402 7 170 5.73E-48 T 15-10-2018 VIBNI_A3592 9173414a7e80d1bc78e8a6c2c28b1713 404 Pfam PF00764 Arginosuccinate synthase 10 396 1.9E-146 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 Gene3D G3DSA:1.10.10.10 2 90 8.4E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 SUPERFAMILY SSF53850 89 292 1.9E-35 T 15-10-2018 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 SUPERFAMILY SSF46785 2 82 2.13E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 Pfam PF03466 LysR substrate binding domain 88 292 5.5E-42 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 Gene3D G3DSA:3.40.190.290 91 293 3.0E-32 T 15-10-2018 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0542 fd678ccd6b14c56ccd084e090770a275 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1400 f339bbada2e500ca7d3bdc08e39856e7 271 Gene3D G3DSA:1.10.3720.10 1 258 2.3E-47 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1400 f339bbada2e500ca7d3bdc08e39856e7 271 SUPERFAMILY SSF161098 4 271 2.15E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1400 f339bbada2e500ca7d3bdc08e39856e7 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 263 6.4E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0013 67d464f494c5229bf1305ead05dbba19 214 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 23 183 27.921 T 15-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VIBNI_B0013 67d464f494c5229bf1305ead05dbba19 214 Pfam PF03975 CheD chemotactic sensory transduction 84 179 4.4E-27 T 15-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VIBNI_B0013 67d464f494c5229bf1305ead05dbba19 214 Gene3D G3DSA:3.30.1330.200 21 190 1.4E-46 T 15-10-2018 IPR038592 CheD-like superfamily VIBNI_B0013 67d464f494c5229bf1305ead05dbba19 214 SUPERFAMILY SSF64438 28 184 9.15E-45 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 Pfam PF00561 alpha/beta hydrolase fold 46 265 1.7E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 Gene3D G3DSA:3.40.50.1820 14 303 2.0E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 SUPERFAMILY SSF53474 35 302 3.15E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 5.6E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 71 86 5.6E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1946 15b3b6b9c5c07dccba3b82a04243f2a9 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 5.6E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 SUPERFAMILY SSF53474 454 706 9.94E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 539 558 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 511 535 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 503 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 569 589 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 644 666 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 625 640 3.1E-64 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 546 576 - T 15-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 SUPERFAMILY SSF50993 38 448 7.06E-101 T 15-10-2018 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 Pfam PF00326 Prolyl oligopeptidase family 500 715 1.0E-72 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 Gene3D G3DSA:2.130.10.120 109 445 1.5E-258 T 15-10-2018 VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 Gene3D G3DSA:3.40.50.1820 51 684 1.5E-258 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1770 2922a264d157dbb59e7bb5a3ba1a6c9b 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 43 442 3.0E-130 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VIBNI_B0099 3d30a326ecd10f9000c24b28a43b0672 210 Gene3D G3DSA:1.10.3210.50 7 210 8.6E-68 T 15-10-2018 VIBNI_B0099 3d30a326ecd10f9000c24b28a43b0672 210 Pfam PF01966 HD domain 27 129 1.8E-11 T 15-10-2018 IPR006674 HD domain VIBNI_B0099 3d30a326ecd10f9000c24b28a43b0672 210 SUPERFAMILY SSF109604 11 209 1.76E-60 T 15-10-2018 VIBNI_B0099 3d30a326ecd10f9000c24b28a43b0672 210 SMART SM00471 22 139 1.7E-5 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A2024 2dbcf917b06d120a0b652b178a59111b 712 Gene3D G3DSA:3.30.420.10 284 479 6.5E-14 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2024 2dbcf917b06d120a0b652b178a59111b 712 Pfam PF00665 Integrase core domain 290 428 1.2E-7 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VIBNI_A2024 2dbcf917b06d120a0b652b178a59111b 712 SUPERFAMILY SSF53098 316 434 7.78E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 SUPERFAMILY SSF46785 22 99 4.67E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.1E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 6.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 6.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 Gene3D G3DSA:1.10.10.10 14 103 1.2E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 Gene3D G3DSA:3.40.190.10 106 307 6.0E-38 T 15-10-2018 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 SUPERFAMILY SSF53850 106 309 8.87E-38 T 15-10-2018 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 Gene3D G3DSA:3.40.190.10 187 283 6.0E-38 T 15-10-2018 VIBNI_A2893 9ca16a05e7cb63f9af29a49d590be5e5 319 Pfam PF03466 LysR substrate binding domain 112 308 6.0E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 SMART SM00418 9 87 3.9E-17 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.9E-11 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 2.9E-11 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 2.9E-11 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.9E-11 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 Pfam PF12840 Helix-turn-helix domain 11 67 1.9E-12 T 15-10-2018 VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 SUPERFAMILY SSF46785 7 100 1.15E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1460 93086bf51c9d00d5a10541c443b505b4 113 Gene3D G3DSA:1.10.10.10 2 110 6.0E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3091 9708f51a155b4bd70143a4143b6342ec 271 SUPERFAMILY SSF53807 9 262 1.02E-50 T 15-10-2018 VIBNI_A3091 9708f51a155b4bd70143a4143b6342ec 271 Gene3D G3DSA:3.40.50.1980 130 264 2.1E-22 T 15-10-2018 VIBNI_A3091 9708f51a155b4bd70143a4143b6342ec 271 Gene3D G3DSA:3.40.50.1980 4 127 3.1E-26 T 15-10-2018 VIBNI_A3091 9708f51a155b4bd70143a4143b6342ec 271 Pfam PF01497 Periplasmic binding protein 12 240 9.8E-40 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 SUPERFAMILY SSF52540 4 242 5.88E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Gene3D G3DSA:2.40.50.940 222 249 9.7E-13 T 15-10-2018 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Gene3D G3DSA:3.40.50.300 3 221 2.3E-66 T 15-10-2018 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Pfam PF08402 TOBE domain 255 324 3.6E-9 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Gene3D G3DSA:2.40.50.140 258 318 2.7E-9 T 15-10-2018 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Gene3D G3DSA:2.40.50.100 254 328 2.7E-9 T 15-10-2018 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 Pfam PF00005 ABC transporter 19 161 9.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 SUPERFAMILY SSF50331 236 330 3.64E-19 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A0795 76865a5c4e78072e23bbbae53937212d 333 SMART SM00382 28 216 2.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0185 f20a1658ba521148c76458ef1c841218 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 8.4E-71 T 15-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VIBNI_A0185 f20a1658ba521148c76458ef1c841218 177 Gene3D G3DSA:3.40.50.2020 1 177 5.2E-64 T 15-10-2018 VIBNI_A0185 f20a1658ba521148c76458ef1c841218 177 Pfam PF00156 Phosphoribosyl transferase domain 23 160 5.4E-23 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VIBNI_A0185 f20a1658ba521148c76458ef1c841218 177 SUPERFAMILY SSF53271 3 176 5.64E-53 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A3790 6a3953bccf3ca1a999eef0ea6ee720b4 353 Gene3D G3DSA:3.40.190.170 26 347 5.4E-76 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A3790 6a3953bccf3ca1a999eef0ea6ee720b4 353 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 319 3.9E-57 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 SMART SM00871 137 295 1.1E-18 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 Gene3D G3DSA:3.20.80.10 137 297 4.8E-27 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 Pfam PF12833 Helix-turn-helix domain 31 110 8.5E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 SMART SM00342 25 108 3.8E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 SUPERFAMILY SSF46689 9 59 1.34E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 Pfam PF14526 Integron-associated effector binding protein 140 294 5.7E-14 T 15-10-2018 IPR029441 Integron-associated effector binding protein VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 Gene3D G3DSA:1.10.10.60 62 119 5.9E-15 T 15-10-2018 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 4.0E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 4.0E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 Gene3D G3DSA:1.10.10.60 2 61 1.0E-17 T 15-10-2018 VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 SUPERFAMILY SSF55136 138 296 4.45E-18 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A0832 bc9906f04fb3b2b31ce26eee2d000be2 298 SUPERFAMILY SSF46689 62 111 9.41E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 SMART SM00345 9 68 4.9E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 Gene3D G3DSA:1.10.10.10 2 78 1.0E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 5.9E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 Gene3D G3DSA:3.90.1150.10 107 466 4.0E-79 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 Gene3D G3DSA:3.40.640.10 139 355 4.0E-79 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 SUPERFAMILY SSF53383 102 467 1.32E-72 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 Pfam PF00155 Aminotransferase class I and II 140 447 6.1E-22 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_B1491 62b8cb140244c95df3e61dd60f49791d 483 SUPERFAMILY SSF46785 4 72 3.18E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 Gene3D G3DSA:1.10.1370.30 1 493 3.7E-195 T 15-10-2018 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 SUPERFAMILY SSF55486 1 493 4.03E-116 T 15-10-2018 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 4 492 1.1E-98 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PIRSF PIRSF006615 1 493 6.0E-194 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A1867 d85526f6ec40271c8409a5ae07cce1fe 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.8E-48 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 Gene3D G3DSA:1.10.287.1080 2 126 1.4E-45 T 15-10-2018 VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 SUPERFAMILY SSF101386 139 240 2.06E-23 T 15-10-2018 VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.0E-105 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 1.9E-27 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 232 9.7E-7 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 Gene3D G3DSA:1.10.287.1080 132 265 1.9E-45 T 15-10-2018 VIBNI_A0127 2270e1c7837e65348d1e523d96e8229c 267 SUPERFAMILY SSF101386 3 105 8.14E-26 T 15-10-2018 VIBNI_A1892 a4c492f887fc50502010810f40768e44 150 Pfam PF13505 Outer membrane protein beta-barrel domain 5 149 8.6E-14 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A1892 a4c492f887fc50502010810f40768e44 150 SUPERFAMILY SSF56925 19 149 2.88E-18 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A1892 a4c492f887fc50502010810f40768e44 150 Gene3D G3DSA:2.40.160.20 18 150 3.2E-20 T 15-10-2018 VIBNI_A3891 33c7a10b944e530c1d88ce38cdd886b5 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site VIBNI_A3891 33c7a10b944e530c1d88ce38cdd886b5 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 246 4.6E-55 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3891 33c7a10b944e530c1d88ce38cdd886b5 251 Gene3D G3DSA:3.40.190.10 98 206 8.1E-30 T 15-10-2018 VIBNI_A3891 33c7a10b944e530c1d88ce38cdd886b5 251 SUPERFAMILY SSF53850 1 249 2.37E-57 T 15-10-2018 VIBNI_A3891 33c7a10b944e530c1d88ce38cdd886b5 251 SMART SM00062 27 248 1.0E-74 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 4.9E-26 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 4.9E-26 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 4.9E-26 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 4.9E-26 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 SUPERFAMILY SSF52374 5 334 1.77E-91 T 15-10-2018 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 1.0E-76 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 7.5E-108 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 Gene3D G3DSA:1.10.240.10 191 304 4.1E-140 T 15-10-2018 VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 Gene3D G3DSA:3.40.50.620 5 333 4.1E-140 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3574 255f190663a55994f42b56d7704ddea9 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.97 T 15-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VIBNI_B1132 e4f845ba6eb76ae1820eeecfc6e9df19 200 Pfam PF05036 Sporulation related domain 110 174 5.1E-9 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_B1132 e4f845ba6eb76ae1820eeecfc6e9df19 200 SUPERFAMILY SSF110997 109 171 7.32E-5 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_B1132 e4f845ba6eb76ae1820eeecfc6e9df19 200 Gene3D G3DSA:3.30.70.1070 93 191 1.6E-24 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_B0660 fc3077599a498abc9d99c12e231b8b5e 119 SMART SM00422 1 68 9.1E-10 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0660 fc3077599a498abc9d99c12e231b8b5e 119 Gene3D G3DSA:1.10.1660.10 1 112 1.7E-21 T 15-10-2018 VIBNI_B0660 fc3077599a498abc9d99c12e231b8b5e 119 Pfam PF13411 MerR HTH family regulatory protein 3 64 1.2E-12 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0660 fc3077599a498abc9d99c12e231b8b5e 119 SUPERFAMILY SSF46955 2 103 1.28E-20 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0492 6746ab35b7eee6aea8a857f6bcd5cab2 146 Gene3D G3DSA:3.40.140.10 2 138 2.6E-39 T 15-10-2018 VIBNI_B0492 6746ab35b7eee6aea8a857f6bcd5cab2 146 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 103 5.8E-18 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VIBNI_B0492 6746ab35b7eee6aea8a857f6bcd5cab2 146 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VIBNI_B0492 6746ab35b7eee6aea8a857f6bcd5cab2 146 SUPERFAMILY SSF53927 7 143 1.22E-38 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 SUPERFAMILY SSF53067 93 367 8.46E-34 T 15-10-2018 VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 Gene3D G3DSA:3.30.420.40 213 340 1.5E-14 T 15-10-2018 VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 Gene3D G3DSA:1.10.10.10 12 78 1.0E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 SUPERFAMILY SSF46785 16 71 7.88E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 Pfam PF00480 ROK family 93 244 2.7E-23 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_B0876 9d00f154d6aa83ea206580e98083b452 374 Gene3D G3DSA:3.30.420.40 79 212 5.7E-25 T 15-10-2018 VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 406 7.1E-7 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 344 5.4E-23 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 SUPERFAMILY SSF55073 243 410 7.85E-35 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 SMART SM00267 226 411 5.9E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 Gene3D G3DSA:3.30.70.270 231 411 1.7E-45 T 15-10-2018 VIBNI_B1151 8875c7804e630c20bf4e01743039287e 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 345 4.2E-25 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0016 16bad1bc57a3a6e2f05aeeb5f9b33117 389 SUPERFAMILY SSF58104 87 351 4.97E-36 T 15-10-2018 VIBNI_B0016 16bad1bc57a3a6e2f05aeeb5f9b33117 389 Gene3D G3DSA:1.10.287.950 61 380 1.2E-33 T 15-10-2018 VIBNI_B0016 16bad1bc57a3a6e2f05aeeb5f9b33117 389 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 172 311 9.0E-25 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0016 16bad1bc57a3a6e2f05aeeb5f9b33117 389 SMART SM00283 94 355 7.3E-5 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1595 af763f98c9fc6d362ad4f4e166d6da81 222 SMART SM00287 63 130 1.9E-7 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A1595 af763f98c9fc6d362ad4f4e166d6da81 222 Gene3D G3DSA:2.30.30.40 57 130 1.1E-11 T 15-10-2018 VIBNI_A1595 af763f98c9fc6d362ad4f4e166d6da81 222 Pfam PF08239 Bacterial SH3 domain 71 128 3.0E-8 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A3880 6b7e7b311e25be1100e101e641dcce63 452 SUPERFAMILY SSF49299 228 316 3.27E-6 T 15-10-2018 IPR035986 PKD domain superfamily VIBNI_A3880 6b7e7b311e25be1100e101e641dcce63 452 Gene3D G3DSA:2.60.40.10 230 322 5.1E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3880 6b7e7b311e25be1100e101e641dcce63 452 Gene3D G3DSA:2.60.40.10 149 229 2.4E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3880 6b7e7b311e25be1100e101e641dcce63 452 Gene3D G3DSA:2.60.40.10 27 128 9.3E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A1405 456095996f5b3e90b2d7db26cecef695 409 Pfam PF12704 MacB-like periplasmic core domain 17 215 3.2E-11 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A1405 456095996f5b3e90b2d7db26cecef695 409 Pfam PF02687 FtsX-like permease family 292 397 6.9E-7 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 SUPERFAMILY SSF51569 6 245 5.02E-83 T 15-10-2018 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.467 T 15-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 4.5E-47 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.3E-80 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 Gene3D G3DSA:3.20.20.70 1 256 9.8E-102 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 SMART SM01133 10 244 3.4E-79 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A0493 190aef6a3e9ae25452b26b04f43f63bd 258 PIRSF PIRSF001357 5 252 2.1E-76 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 SUPERFAMILY SSF53697 11 317 8.9E-65 T 15-10-2018 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 Pfam PF01380 SIS domain 41 171 8.1E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 Gene3D G3DSA:3.40.50.10490 5 195 8.0E-64 T 15-10-2018 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 SMART SM00116 275 322 76.0 T 15-10-2018 IPR000644 CBS domain VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 SMART SM00116 210 258 0.0019 T 15-10-2018 IPR000644 CBS domain VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 Gene3D G3DSA:3.10.580.10 196 320 3.7E-44 T 15-10-2018 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 PIRSF PIRSF004692 1 323 4.4E-128 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.2E-109 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 Pfam PF00571 CBS domain 203 258 4.1E-7 T 15-10-2018 IPR000644 CBS domain VIBNI_A2956 68a1bb3de8df83df271b837eef0d0fde 323 Pfam PF00571 CBS domain 268 320 1.7E-5 T 15-10-2018 IPR000644 CBS domain VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 Pfam PF03466 LysR substrate binding domain 91 296 1.8E-41 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 SUPERFAMILY SSF46785 10 90 8.62E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 Gene3D G3DSA:3.40.190.10 166 269 1.6E-55 T 15-10-2018 VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 SUPERFAMILY SSF53850 92 301 3.44E-44 T 15-10-2018 VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 Gene3D G3DSA:3.40.190.10 95 291 1.6E-55 T 15-10-2018 VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 66 3.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0773 73fdbd063fee51521b70b8296fd374cc 303 Gene3D G3DSA:1.10.10.10 7 94 3.1E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1486 d40f370e4fc0b7fae53894708a41f01e 179 SUPERFAMILY SSF55729 1 147 2.48E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1486 d40f370e4fc0b7fae53894708a41f01e 179 Pfam PF00583 Acetyltransferase (GNAT) family 54 141 8.3E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1486 d40f370e4fc0b7fae53894708a41f01e 179 Gene3D G3DSA:3.40.630.30 1 166 2.3E-32 T 15-10-2018 VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 Pfam PF00582 Universal stress protein family 6 158 4.4E-23 T 15-10-2018 IPR006016 UspA VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 PRINTS PR01438 Universal stress protein signature 5 23 1.5E-9 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 PRINTS PR01438 Universal stress protein signature 136 158 1.5E-9 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 PRINTS PR01438 Universal stress protein signature 118 130 1.5E-9 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 Gene3D G3DSA:3.40.50.620 1 163 1.9E-31 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B1982 d0d80e220fa74b7930fdd043e88a2281 163 SUPERFAMILY SSF52402 6 158 1.17E-28 T 15-10-2018 VIBNI_A1513 527358f5913964c9e751b594e10af365 331 Gene3D G3DSA:1.10.3470.10 4 328 3.0E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A1513 527358f5913964c9e751b594e10af365 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 29.345 T 15-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VIBNI_A1513 527358f5913964c9e751b594e10af365 331 SUPERFAMILY SSF81345 7 327 1.57E-80 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A1513 527358f5913964c9e751b594e10af365 331 Pfam PF01032 FecCD transport family 25 326 4.0E-82 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 SUPERFAMILY SSF56796 452 863 5.89E-113 T 15-10-2018 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Gene3D G3DSA:3.40.605.10 12 446 5.1E-179 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 PIRSF PIRSF000111 1 865 0.0 T 15-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Gene3D G3DSA:3.40.309.10 218 405 5.1E-179 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Pfam PF00171 Aldehyde dehydrogenase family 5 402 5.0E-25 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 SUPERFAMILY SSF53720 6 454 3.8E-83 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.8E-110 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Gene3D G3DSA:3.40.50.1970 451 642 4.2E-58 T 15-10-2018 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 Gene3D G3DSA:1.20.1090.10 644 864 6.5E-59 T 15-10-2018 VIBNI_A0888 3b2cf52337a1598156b9eaff720e19fa 905 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 SUPERFAMILY SSF54368 3 100 4.32E-36 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 15-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 Gene3D G3DSA:3.10.20.70 2 104 1.5E-40 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 SUPERFAMILY SSF55931 102 468 4.22E-136 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 15-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.2E-136 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.1E-31 T 15-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 Gene3D G3DSA:3.30.590.10 105 457 1.1E-146 T 15-10-2018 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 SMART SM01230 102 379 5.3E-149 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A3478 2dc7a52c91bc31fe280e6aad33c445fe 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.0E-209 T 15-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VIBNI_A1168 df5501811612f132cb62a87afd122552 225 Gene3D G3DSA:3.40.1550.10 8 173 5.3E-20 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A1168 df5501811612f132cb62a87afd122552 225 Pfam PF11813 Protein of unknown function (DUF3334) 3 225 7.2E-116 T 15-10-2018 IPR024513 Protein of unknown function DUF3334 VIBNI_A1168 df5501811612f132cb62a87afd122552 225 SUPERFAMILY SSF103039 10 173 1.44E-24 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Gene3D G3DSA:3.40.50.720 1 112 1.4E-35 T 15-10-2018 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 SUPERFAMILY SSF51735 1 112 1.18E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Gene3D G3DSA:1.10.8.210 149 205 2.4E-8 T 15-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Pfam PF10414 Sirohaem synthase dimerisation region 151 192 2.1E-12 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.5E-9 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 SUPERFAMILY SSF75615 114 193 5.62E-24 T 15-10-2018 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Pfam PF13241 Putative NAD(P)-binding 6 115 2.6E-29 T 15-10-2018 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 194 6.5E-61 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_A1804 4d518f8943564a02e4a333eba5f9f4fc 314 Gene3D G3DSA:3.30.160.110 113 147 4.7E-14 T 15-10-2018 VIBNI_B1923 792b94f08936c30062ba07e509f393f0 353 Gene3D G3DSA:3.40.50.1820 16 153 4.4E-5 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1923 792b94f08936c30062ba07e509f393f0 353 SUPERFAMILY SSF53474 25 241 6.16E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1902 495f8bb0f98a90e68573e98ed4fc9ca5 332 SUPERFAMILY SSF53850 131 266 2.08E-5 T 15-10-2018 VIBNI_B1902 495f8bb0f98a90e68573e98ed4fc9ca5 332 Gene3D G3DSA:3.40.190.170 27 330 1.6E-92 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B1902 495f8bb0f98a90e68573e98ed4fc9ca5 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 47 282 7.7E-60 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B1902 495f8bb0f98a90e68573e98ed4fc9ca5 332 PIRSF PIRSF006470 1 329 9.2E-82 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B1902 495f8bb0f98a90e68573e98ed4fc9ca5 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 46 315 5.7E-77 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 Gene3D G3DSA:1.20.1510.10 8 206 4.9E-61 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 286 1.4E-69 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 3.5E-24 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 SUPERFAMILY SSF160240 210 287 1.7E-22 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 SUPERFAMILY SSF161111 8 207 3.92E-51 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 Gene3D G3DSA:3.30.70.1350 207 290 5.1E-28 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VIBNI_A3253 5722d94b9ff167bb5a95be64ae72034c 294 Pfam PF01545 Cation efflux family 14 206 6.9E-42 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VIBNI_B0955 9e10a2ff4823c824e4f4d14340bcf9a5 120 Pfam PF01638 HxlR-like helix-turn-helix 15 102 1.6E-22 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type VIBNI_B0955 9e10a2ff4823c824e4f4d14340bcf9a5 120 SUPERFAMILY SSF46785 3 103 7.12E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0955 9e10a2ff4823c824e4f4d14340bcf9a5 120 Gene3D G3DSA:1.10.10.10 1 115 1.8E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 Gene3D G3DSA:3.40.190.290 95 292 5.5E-42 T 15-10-2018 VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 SUPERFAMILY SSF46785 10 116 2.62E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 Pfam PF03466 LysR substrate binding domain 95 293 3.2E-30 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 7.7E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 Gene3D G3DSA:1.10.10.10 7 92 7.3E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1021 5c60d278794b7224199a2d55d71ef76e 301 SUPERFAMILY SSF53850 95 297 4.89E-30 T 15-10-2018 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 SUPERFAMILY SSF51215 25 177 5.23E-27 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 Gene3D G3DSA:2.60.120.280 46 181 2.6E-12 T 15-10-2018 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 Gene3D G3DSA:1.10.10.2730 244 291 1.8E-17 T 15-10-2018 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 SUPERFAMILY SSF46689 244 291 2.6E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 9.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 9.9E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 Pfam PF12833 Helix-turn-helix domain 213 291 6.8E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 SMART SM00342 207 290 4.8E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 SUPERFAMILY SSF46689 193 238 8.51E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 Pfam PF02311 AraC-like ligand binding domain 38 173 3.2E-15 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_A0951 fc7fff009d311cbb62cc2bda5b2055f2 304 Gene3D G3DSA:1.10.10.60 193 243 6.6E-8 T 15-10-2018 VIBNI_A2458 25cb8722b742733f089229a3cec29d6f 270 PIRSF PIRSF003092 1 270 3.7E-95 T 15-10-2018 IPR025501 ATP binding protein MinD VIBNI_A2458 25cb8722b742733f089229a3cec29d6f 270 Gene3D G3DSA:3.40.50.300 1 260 1.3E-73 T 15-10-2018 VIBNI_A2458 25cb8722b742733f089229a3cec29d6f 270 Pfam PF13614 AAA domain 3 166 1.1E-19 T 15-10-2018 IPR025669 AAA domain VIBNI_A2458 25cb8722b742733f089229a3cec29d6f 270 SUPERFAMILY SSF52540 1 268 2.7E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2458 25cb8722b742733f089229a3cec29d6f 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 6.7E-110 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VIBNI_A2770 bd7edab6f58c8da3bc08c714fe7b0cc7 79 Gene3D G3DSA:2.10.290.10 2 72 2.5E-25 T 15-10-2018 IPR029037 YfgJ-like VIBNI_A2770 bd7edab6f58c8da3bc08c714fe7b0cc7 79 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 7.0E-20 T 15-10-2018 IPR010807 Protein of unknown function DUF1407 VIBNI_A2770 bd7edab6f58c8da3bc08c714fe7b0cc7 79 Pfam PF07191 zinc-ribbons 5 69 1.1E-25 T 15-10-2018 IPR010807 Protein of unknown function DUF1407 VIBNI_A2770 bd7edab6f58c8da3bc08c714fe7b0cc7 79 SUPERFAMILY SSF161187 3 71 5.23E-26 T 15-10-2018 VIBNI_A0692 515fd20f2c4197f9e5e175ba06f381e7 341 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.203 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC VIBNI_A0692 515fd20f2c4197f9e5e175ba06f381e7 341 Gene3D G3DSA:3.30.530.50 96 206 2.0E-11 T 15-10-2018 VIBNI_A0692 515fd20f2c4197f9e5e175ba06f381e7 341 Gene3D G3DSA:3.30.310.170 221 340 6.0E-37 T 15-10-2018 VIBNI_A0692 515fd20f2c4197f9e5e175ba06f381e7 341 PIRSF PIRSF026343 4 338 2.5E-119 T 15-10-2018 IPR014524 Outer membrane protein assembly factor BamC VIBNI_A0692 515fd20f2c4197f9e5e175ba06f381e7 341 Pfam PF06804 NlpB/DapX lipoprotein 35 335 4.7E-96 T 15-10-2018 IPR010653 NlpB/DapX lipoprotein VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 Pfam PF00482 Type II secretion system (T2SS), protein F 279 401 1.3E-26 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 Pfam PF00482 Type II secretion system (T2SS), protein F 75 198 2.0E-32 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 170 198 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 Gene3D G3DSA:1.20.81.30 262 373 1.1E-26 T 15-10-2018 VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 Gene3D G3DSA:1.20.81.30 60 178 6.4E-31 T 15-10-2018 VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 7.1E-18 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 7.1E-18 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 374 388 7.1E-18 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_A0174 394f0f705f59561292bd80fa9e813a9b 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 390 409 7.1E-18 T 15-10-2018 IPR003004 GspF/PilC family VIBNI_B0978 609768c96fbd696cbb7a60219a9cc5f2 314 Pfam PF05035 2-keto-3-deoxy-galactonokinase 12 305 1.5E-86 T 15-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 VIBNI_B0978 609768c96fbd696cbb7a60219a9cc5f2 314 Gene3D G3DSA:3.30.420.300 9 117 1.6E-80 T 15-10-2018 VIBNI_B0978 609768c96fbd696cbb7a60219a9cc5f2 314 Gene3D G3DSA:3.30.420.310 88 287 1.6E-80 T 15-10-2018 VIBNI_A1278 9ed27ae3f0d052ffbbfa13b808306f8d 302 SMART SM00481 3 70 1.5E-16 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VIBNI_A1278 9ed27ae3f0d052ffbbfa13b808306f8d 302 SUPERFAMILY SSF89550 1 275 1.31E-54 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VIBNI_A1278 9ed27ae3f0d052ffbbfa13b808306f8d 302 Gene3D G3DSA:3.20.20.140 3 250 5.4E-83 T 15-10-2018 VIBNI_A1278 9ed27ae3f0d052ffbbfa13b808306f8d 302 Pfam PF02811 PHP domain 4 173 3.0E-10 T 15-10-2018 IPR004013 PHP domain GO:0003824 VIBNI_A1278 9ed27ae3f0d052ffbbfa13b808306f8d 302 Gene3D G3DSA:1.10.150.650 98 169 5.4E-83 T 15-10-2018 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 Gene3D G3DSA:3.30.450.20 30 204 8.0E-52 T 15-10-2018 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 Gene3D G3DSA:3.30.565.10 319 451 9.3E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 SUPERFAMILY SSF55874 327 450 1.31E-20 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 PIRSF PIRSF037314 1 451 1.7E-176 T 15-10-2018 IPR017171 Signal transduction histidine kinase, MctS VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 SMART SM00387 359 451 1.1E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 SMART SM01049 42 133 2.0E-34 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 Pfam PF17200 Single Cache domain 2 46 192 2.6E-45 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 450 4.2E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2027 a92d2386c0a32a8516d0dc2970a4612a 451 Pfam PF07730 Histidine kinase 250 321 5.6E-15 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VIBNI_A0557 9e84f6d0e0731de1789e41428e5461f5 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 141 1.0E-18 T 15-10-2018 IPR003111 Lon, substrate-binding domain VIBNI_A0557 9e84f6d0e0731de1789e41428e5461f5 191 Gene3D G3DSA:1.10.4060.10 113 191 3.2E-6 T 15-10-2018 VIBNI_A0557 9e84f6d0e0731de1789e41428e5461f5 191 SUPERFAMILY SSF88697 7 189 4.22E-46 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A0557 9e84f6d0e0731de1789e41428e5461f5 191 SMART SM00464 4 190 3.2E-4 T 15-10-2018 IPR003111 Lon, substrate-binding domain VIBNI_A0557 9e84f6d0e0731de1789e41428e5461f5 191 Gene3D G3DSA:2.30.130.40 4 111 1.4E-30 T 15-10-2018 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 240 15.864 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 15-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.8E-51 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.8E-51 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.8E-51 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.8E-51 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 4.2E-75 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_A3411 6ae7c08a29d7e33752ac93259f8031df 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 5.3E-66 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VIBNI_B1975 f8fc63b9b859220aebc51a1eee69b89b 127 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 4.9E-22 T 15-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VIBNI_B1975 f8fc63b9b859220aebc51a1eee69b89b 127 SUPERFAMILY SSF55331 2 125 3.85E-36 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_B1975 f8fc63b9b859220aebc51a1eee69b89b 127 Gene3D G3DSA:3.30.429.10 2 126 1.8E-42 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 SUPERFAMILY SSF118196 1 226 5.1E-78 T 15-10-2018 IPR036413 YaeB-like superfamily VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 Gene3D G3DSA:3.30.2310.10 141 227 2.3E-19 T 15-10-2018 VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 Gene3D G3DSA:2.40.30.70 1 140 8.0E-43 T 15-10-2018 IPR036414 YaeB, N-terminal domain superfamily VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 15-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 147 4.3E-47 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain VIBNI_A0601 05be7ba9e18dabebcb436c25d4124b35 232 Pfam PF01980 Uncharacterised protein family UPF0066 20 142 5.7E-39 T 15-10-2018 IPR023370 YaeB-like, N-terminal domain VIBNI_B0241 c50a9a6d459e6ddf3738d65a9b272b3c 468 SUPERFAMILY SSF56954 31 448 6.28E-43 T 15-10-2018 VIBNI_B0241 c50a9a6d459e6ddf3738d65a9b272b3c 468 Pfam PF02321 Outer membrane efflux protein 49 229 7.5E-7 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_B0241 c50a9a6d459e6ddf3738d65a9b272b3c 468 Pfam PF02321 Outer membrane efflux protein 274 448 7.3E-16 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_B0241 c50a9a6d459e6ddf3738d65a9b272b3c 468 Gene3D G3DSA:1.20.1600.10 23 451 6.7E-35 T 15-10-2018 VIBNI_A3815 87a6efdf3b801b49b6417f1074ccab1e 69 SUPERFAMILY SSF54285 5 69 1.96E-14 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VIBNI_A3815 87a6efdf3b801b49b6417f1074ccab1e 69 Pfam PF02597 ThiS family 6 69 5.9E-12 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VIBNI_A3815 87a6efdf3b801b49b6417f1074ccab1e 69 Gene3D G3DSA:3.10.20.30 4 69 6.0E-19 T 15-10-2018 IPR012675 Beta-grasp domain superfamily VIBNI_A3815 87a6efdf3b801b49b6417f1074ccab1e 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 7.1E-15 T 15-10-2018 IPR010035 ThiS, thiamine-biosynthesis VIBNI_B0302 f263aabba1af18262ed32daa4b3ee94e 313 Gene3D G3DSA:3.40.50.2300 52 293 1.1E-67 T 15-10-2018 VIBNI_B0302 f263aabba1af18262ed32daa4b3ee94e 313 Pfam PF13407 Periplasmic binding protein domain 41 287 1.0E-43 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0302 f263aabba1af18262ed32daa4b3ee94e 313 SUPERFAMILY SSF53822 31 308 9.6E-61 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0302 f263aabba1af18262ed32daa4b3ee94e 313 Gene3D G3DSA:3.40.50.2300 132 304 1.1E-67 T 15-10-2018 VIBNI_A2478 f44d2e4dae005114b42a48186e47ead6 154 Pfam PF00075 RNase H 3 141 1.4E-52 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VIBNI_A2478 f44d2e4dae005114b42a48186e47ead6 154 SUPERFAMILY SSF53098 3 142 5.56E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2478 f44d2e4dae005114b42a48186e47ead6 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.334 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 VIBNI_A2478 f44d2e4dae005114b42a48186e47ead6 154 Gene3D G3DSA:3.30.420.10 1 154 3.0E-60 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 Gene3D G3DSA:3.40.50.300 1 139 3.2E-46 T 15-10-2018 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 Pfam PF06144 DNA polymerase III, delta subunit 20 189 9.3E-48 T 15-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 332 2.4E-34 T 15-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 Gene3D G3DSA:1.20.272.10 213 337 1.9E-39 T 15-10-2018 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 Gene3D G3DSA:1.10.8.60 143 212 1.6E-21 T 15-10-2018 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 SUPERFAMILY SSF52540 1 208 1.36E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 19 331 4.4E-101 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VIBNI_A2710 7b1d765eb1bb581f25108282a8e8db65 340 SUPERFAMILY SSF48019 211 331 7.74E-29 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VIBNI_A1519 dd8aada04a99bd3201b758532e5fcff2 516 SUPERFAMILY SSF47413 12 84 3.38E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1519 dd8aada04a99bd3201b758532e5fcff2 516 SMART SM00530 17 79 7.0E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1519 dd8aada04a99bd3201b758532e5fcff2 516 Pfam PF12844 Helix-turn-helix domain 15 82 2.0E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A1519 dd8aada04a99bd3201b758532e5fcff2 516 Pfam PF12268 Protein of unknown function (DUF3612) 329 507 7.6E-94 T 15-10-2018 IPR022055 Protein of unknown function DUF3612 VIBNI_A1519 dd8aada04a99bd3201b758532e5fcff2 516 Gene3D G3DSA:1.10.260.40 11 95 1.2E-13 T 15-10-2018 VIBNI_A0915 b3444ab90b6bf10d666f2e0da49f8467 115 Gene3D G3DSA:1.20.120.160 1 113 3.1E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0915 b3444ab90b6bf10d666f2e0da49f8467 115 SUPERFAMILY SSF47226 4 110 1.83E-17 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A0915 b3444ab90b6bf10d666f2e0da49f8467 115 Pfam PF01627 Hpt domain 26 87 2.8E-8 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 SUPERFAMILY SSF53659 4 336 2.06E-100 T 15-10-2018 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 2.9E-108 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 PIRSF PIRSF002465 2 339 1.7E-122 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 134.461 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.3E-98 T 15-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VIBNI_A2364 8e9680a0e61245f10a835db989f1c7b3 341 Gene3D G3DSA:3.40.718.10 2 340 9.2E-118 T 15-10-2018 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 PRINTS PR00297 10kDa chaperonin signature 82 95 2.3E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.3E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.3E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.3E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 Gene3D G3DSA:2.30.33.40 1 96 1.6E-36 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.301 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 SMART SM00883 2 95 8.6E-51 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 6.4E-31 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VIBNI_A3250 7e3bccd4e110626c1e4ff4cdc4a45852 96 SUPERFAMILY SSF50129 1 96 3.65E-31 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A1463 ab57efd3e0ae32300ae83b2b476145f2 192 Pfam PF01872 RibD C-terminal domain 3 185 4.0E-20 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VIBNI_A1463 ab57efd3e0ae32300ae83b2b476145f2 192 Gene3D G3DSA:3.40.430.10 2 189 9.4E-33 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A1463 ab57efd3e0ae32300ae83b2b476145f2 192 SUPERFAMILY SSF53597 3 190 7.2E-24 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A0069 685423e85f5ef40776cbdabb35faabe9 272 Gene3D G3DSA:3.30.950.10 116 246 4.7E-53 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0069 685423e85f5ef40776cbdabb35faabe9 272 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 245 2.0E-93 T 15-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 VIBNI_A0069 685423e85f5ef40776cbdabb35faabe9 272 Gene3D G3DSA:3.40.1010.10 1 115 1.4E-32 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0069 685423e85f5ef40776cbdabb35faabe9 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 8.9E-41 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_A0069 685423e85f5ef40776cbdabb35faabe9 272 SUPERFAMILY SSF53790 1 249 2.49E-57 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 3.6E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 326 3.6E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 307 3.6E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 SMART SM00387 232 329 1.8E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 SUPERFAMILY SSF55874 199 327 4.85E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 Gene3D G3DSA:3.30.565.10 191 333 1.2E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 328 7.3E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2465 a3d08166b808c426bb131d0094234dc9 343 Pfam PF07730 Histidine kinase 129 194 1.0E-13 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.716 T 15-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 SUPERFAMILY SSF55681 71 268 3.73E-60 T 15-10-2018 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 82 207 8.5E-20 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Gene3D G3DSA:1.10.10.10 1 64 2.3E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 9.2E-11 T 15-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 6.8E-66 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Pfam PF08279 HTH domain 9 59 3.1E-13 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 SUPERFAMILY SSF46785 1 60 1.57E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Gene3D G3DSA:3.30.930.10 66 270 1.8E-66 T 15-10-2018 VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 SUPERFAMILY SSF50037 271 317 7.78E-11 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal VIBNI_A3336 885fc99c9e139b86f2dab2f753f681d3 320 Gene3D G3DSA:2.30.30.100 271 320 1.2E-18 T 15-10-2018 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 Pfam PF00005 ABC transporter 328 459 1.2E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 Gene3D G3DSA:3.40.50.300 7 273 2.3E-57 T 15-10-2018 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 Gene3D G3DSA:3.40.50.300 275 541 2.7E-55 T 15-10-2018 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 Pfam PF00005 ABC transporter 17 178 2.9E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 SUPERFAMILY SSF52540 2 257 8.75E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 Pfam PF12848 ABC transporter 217 295 2.0E-27 T 15-10-2018 IPR032781 ABC-transporter extension domain VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 SUPERFAMILY SSF52540 277 494 1.19E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 SMART SM00382 337 503 8.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3198 eed5b369d5b5350d28170d81fdfdbed0 638 SMART SM00382 26 223 6.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 SUPERFAMILY SSF51215 26 157 1.57E-11 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 SMART SM00342 187 269 3.1E-14 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 SUPERFAMILY SSF46689 225 272 1.3E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 Gene3D G3DSA:1.10.10.60 166 272 5.8E-20 T 15-10-2018 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 9.6E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 9.6E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 Pfam PF02311 AraC-like ligand binding domain 13 138 2.0E-9 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 Gene3D G3DSA:2.60.120.10 15 89 2.1E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0929 e60bc0b485d2d64cc0aa8040c0787638 275 Pfam PF12833 Helix-turn-helix domain 192 271 5.1E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 Pfam PF00005 ABC transporter 339 490 2.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 SUPERFAMILY SSF52540 314 539 5.98E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 Gene3D G3DSA:1.20.1560.10 1 310 2.9E-27 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 Pfam PF00664 ABC transporter transmembrane region 136 274 4.0E-5 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 SUPERFAMILY SSF90123 4 304 1.44E-34 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 SMART SM00382 347 537 1.7E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1603 f50a147a4d3f308db4bb7ed43fbe5476 566 Gene3D G3DSA:3.40.50.300 311 563 9.4E-57 T 15-10-2018 VIBNI_B1407 d95cda3e8a0ee31c6e8521caefae5c63 403 SUPERFAMILY SSF109604 155 326 1.79E-29 T 15-10-2018 VIBNI_B1407 d95cda3e8a0ee31c6e8521caefae5c63 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 132 6.1E-20 T 15-10-2018 IPR021812 Protein of unknown function DUF3391 VIBNI_B1407 d95cda3e8a0ee31c6e8521caefae5c63 403 Gene3D G3DSA:1.10.3210.10 10 327 2.7E-69 T 15-10-2018 VIBNI_B1407 d95cda3e8a0ee31c6e8521caefae5c63 403 Pfam PF13487 HD domain 216 277 3.7E-14 T 15-10-2018 VIBNI_B1407 d95cda3e8a0ee31c6e8521caefae5c63 403 SMART SM00471 160 296 1.0E-7 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 SMART SM00382 57 228 4.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 297 314 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 243 272 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 210 238 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 93 122 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 127 156 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 PRINTS PR00142 RecA protein signature 165 194 3.9E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.9E-169 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.2E-142 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 SUPERFAMILY SSF54752 269 325 4.97E-20 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.47 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 ProSitePatterns PS00321 recA signature. 213 221 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 15-10-2018 VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 SUPERFAMILY SSF52540 3 267 1.64E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0147 76e5ead5917e9c36b80d354b0ab0e36c 346 Gene3D G3DSA:3.30.250.10 268 346 1.5E-25 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VIBNI_B1163 77733194369458fd24778d9079976dea 491 SUPERFAMILY SSF52317 257 448 3.52E-36 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1163 77733194369458fd24778d9079976dea 491 Gene3D G3DSA:3.40.50.880 270 450 4.2E-19 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1163 77733194369458fd24778d9079976dea 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 439 2.8E-58 T 15-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VIBNI_B1163 77733194369458fd24778d9079976dea 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 481 1.6E-161 T 15-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VIBNI_B1163 77733194369458fd24778d9079976dea 491 SUPERFAMILY SSF52540 7 240 2.56E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1163 77733194369458fd24778d9079976dea 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 490 199.588 T 15-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VIBNI_B1163 77733194369458fd24778d9079976dea 491 Gene3D G3DSA:3.40.50.300 6 242 1.1E-56 T 15-10-2018 VIBNI_B1163 77733194369458fd24778d9079976dea 491 Pfam PF13500 AAA domain 7 236 5.9E-24 T 15-10-2018 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 SUPERFAMILY SSF46689 220 264 3.4E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 Pfam PF12833 Helix-turn-helix domain 192 264 8.9E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 Gene3D G3DSA:1.10.10.60 219 266 5.4E-13 T 15-10-2018 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 SUPERFAMILY SSF46689 170 216 7.17E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 Gene3D G3DSA:1.10.10.60 167 218 1.2E-8 T 15-10-2018 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 Pfam PF02311 AraC-like ligand binding domain 14 141 1.9E-22 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 SUPERFAMILY SSF51215 25 145 2.09E-19 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_B0787 1c85149e611b0ab738c09cd15097f822 267 SMART SM00342 183 265 6.5E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1407 3839ed95450d62c06578a67469d5f17f 236 SUPERFAMILY SSF52540 3 226 3.17E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1407 3839ed95450d62c06578a67469d5f17f 236 SMART SM00382 32 220 8.3E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1407 3839ed95450d62c06578a67469d5f17f 236 Pfam PF00005 ABC transporter 24 172 1.5E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1407 3839ed95450d62c06578a67469d5f17f 236 Gene3D G3DSA:3.40.50.300 1 234 9.2E-70 T 15-10-2018 VIBNI_A1407 3839ed95450d62c06578a67469d5f17f 236 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0080 9a7e9fbdd8f1585df12dd167bc06e77b 250 SMART SM00382 26 202 2.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0080 9a7e9fbdd8f1585df12dd167bc06e77b 250 Pfam PF00005 ABC transporter 17 157 3.5E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0080 9a7e9fbdd8f1585df12dd167bc06e77b 250 SUPERFAMILY SSF52540 2 216 3.45E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0080 9a7e9fbdd8f1585df12dd167bc06e77b 250 Gene3D G3DSA:3.40.50.300 1 238 2.7E-57 T 15-10-2018 VIBNI_A1314 99d4cc42dddde30e4101396ded089ecb 79 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 1.9E-38 T 15-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VIBNI_A1314 99d4cc42dddde30e4101396ded089ecb 79 Pfam PF06146 Phosphate-starvation-inducible E 8 68 8.1E-11 T 15-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 Gene3D G3DSA:3.30.1330.10 1 143 1.3E-39 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 27.151 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 SUPERFAMILY SSF55326 4 137 7.72E-31 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 SUPERFAMILY SSF56042 142 306 8.52E-40 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 302 2.3E-14 T 15-10-2018 IPR010918 PurM-like, C-terminal domain VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 PIRSF PIRSF005303 1 320 1.3E-85 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 3.9E-106 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 Gene3D G3DSA:3.90.650.10 145 321 1.5E-54 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VIBNI_A0661 dfafbf9a29de8fd22f734dca2478b4ea 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 4.9E-21 T 15-10-2018 IPR016188 PurM-like, N-terminal domain VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 SUPERFAMILY SSF51735 5 254 8.45E-88 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 Gene3D G3DSA:3.40.50.720 1 260 1.6E-87 T 15-10-2018 VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 3.3E-76 T 15-10-2018 VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0250 856954efe729e5d08f4602036daf19df 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.6E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0095 73be810e1045b93224a4d52eeab802d3 100 Gene3D G3DSA:1.10.20.30 1 47 1.5E-19 T 15-10-2018 VIBNI_A0095 73be810e1045b93224a4d52eeab802d3 100 Pfam PF05164 Cell division protein ZapA 6 88 1.3E-19 T 15-10-2018 IPR007838 Cell division protein ZapA-like VIBNI_A0095 73be810e1045b93224a4d52eeab802d3 100 SUPERFAMILY SSF102829 6 95 3.66E-24 T 15-10-2018 IPR036192 Cell division protein ZapA-like superfamily VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 SMART SM00448 2 115 1.1E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 362 1.1E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 Gene3D G3DSA:3.40.50.2300 1 124 5.0E-36 T 15-10-2018 VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 Pfam PF00072 Response regulator receiver domain 4 115 6.4E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 Gene3D G3DSA:1.10.287.130 125 213 1.6E-10 T 15-10-2018 VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 SUPERFAMILY SSF55874 214 371 5.5E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 SMART SM00387 261 373 0.0083 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 Gene3D G3DSA:3.30.565.10 214 372 1.8E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1554 244d8c099da5f85d3bdd53a367d27481 375 SUPERFAMILY SSF52172 3 183 1.04E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 Pfam PF00294 pfkB family carbohydrate kinase 2 293 2.6E-73 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 299 4.2E-110 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 Gene3D G3DSA:3.40.1190.20 2 300 2.1E-105 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 PRINTS PR00990 Ribokinase signature 33 52 2.9E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 PRINTS PR00990 Ribokinase signature 6 27 2.9E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 PRINTS PR00990 Ribokinase signature 173 188 2.9E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 PRINTS PR00990 Ribokinase signature 217 228 2.9E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 PRINTS PR00990 Ribokinase signature 105 118 2.9E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 SUPERFAMILY SSF53613 1 302 2.96E-87 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1802 50f1c86a7958111dcf82e99a4787a198 309 Hamap MF_01987 Ribokinase [rbsK]. 2 301 25.556 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VIBNI_B1766 d3e2589992dad1f80e1b1c4dee7e45b4 102 Pfam PF13467 Ribbon-helix-helix domain 16 83 7.7E-23 T 15-10-2018 IPR027373 Ribbon-helix-helix domain VIBNI_B1766 d3e2589992dad1f80e1b1c4dee7e45b4 102 Gene3D G3DSA:1.10.3990.20 8 99 9.2E-30 T 15-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VIBNI_B0128 09be55db92e7472fc28fa363e1132b43 139 Gene3D G3DSA:3.40.1650.10 8 136 1.2E-36 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VIBNI_B0128 09be55db92e7472fc28fa363e1132b43 139 SUPERFAMILY SSF102546 1 139 3.53E-43 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VIBNI_B0128 09be55db92e7472fc28fa363e1132b43 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.6E-48 T 15-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VIBNI_B0128 09be55db92e7472fc28fa363e1132b43 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.816 T 15-10-2018 IPR023064 D-ribose pyranase GO:0016872 VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 SUPERFAMILY SSF52172 1 129 3.56E-20 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 Pfam PF00563 EAL domain 143 379 4.3E-53 T 15-10-2018 IPR001633 EAL domain VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 Gene3D G3DSA:3.20.20.450 137 394 1.3E-62 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 Gene3D G3DSA:3.40.50.2300 1 136 5.1E-21 T 15-10-2018 VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 SMART SM00448 4 123 1.2E-11 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 Pfam PF00072 Response regulator receiver domain 6 123 1.2E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 SMART SM00052 138 384 8.6E-47 T 15-10-2018 IPR001633 EAL domain VIBNI_A2760 ac0979b6f96770003d5dff9f0d969a70 397 SUPERFAMILY SSF141868 143 392 1.96E-61 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0505 a3ee85d33b8676c73fa364dd9d91b639 570 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 59 156 1.9E-12 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VIBNI_B0505 a3ee85d33b8676c73fa364dd9d91b639 570 SUPERFAMILY SSF51695 43 208 2.09E-26 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B0505 a3ee85d33b8676c73fa364dd9d91b639 570 Gene3D G3DSA:3.20.20.190 29 295 1.3E-29 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_A3572 7622ddd7c935407577c272297a26da47 868 Pfam PF00932 Lamin Tail Domain 20 130 1.6E-13 T 15-10-2018 IPR001322 Lamin tail domain VIBNI_A3572 7622ddd7c935407577c272297a26da47 868 SUPERFAMILY SSF56219 474 844 2.24E-27 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_A3572 7622ddd7c935407577c272297a26da47 868 ProSitePatterns PS00018 EF-hand calcium-binding domain. 567 579 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site VIBNI_A3572 7622ddd7c935407577c272297a26da47 868 SUPERFAMILY SSF74853 38 127 1.7E-5 T 15-10-2018 IPR036415 Lamin tail domain superfamily VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 Pfam PF00005 ABC transporter 20 161 7.5E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 Gene3D G3DSA:3.40.50.300 1 238 6.2E-77 T 15-10-2018 VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 SMART SM00382 28 210 3.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 SUPERFAMILY SSF50331 237 360 2.67E-15 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 Gene3D G3DSA:2.40.50.100 239 360 2.0E-13 T 15-10-2018 VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 SUPERFAMILY SSF52540 4 242 7.2E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1737 9554f863a3b1ac7100415b509b4e32c4 364 Gene3D G3DSA:2.40.50.140 283 346 2.0E-13 T 15-10-2018 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 Gene3D G3DSA:3.20.20.70 2 230 1.5E-86 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.1E-50 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 1.5E-57 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 SMART SM00934 5 226 9.3E-102 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.26 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 SUPERFAMILY SSF51366 4 228 7.07E-77 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A2330 c86bda3945e0f93a0f0315c52489d780 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VIBNI_A0527 ce4cc8169f189e9b35c3f77ca0eacb11 378 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 374 2.3E-20 T 15-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VIBNI_A0527 ce4cc8169f189e9b35c3f77ca0eacb11 378 Gene3D G3DSA:1.10.10.2840 251 378 5.6E-20 T 15-10-2018 VIBNI_A0527 ce4cc8169f189e9b35c3f77ca0eacb11 378 SUPERFAMILY SSF46689 323 352 4.93E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0527 ce4cc8169f189e9b35c3f77ca0eacb11 378 Pfam PF05651 Putative sugar diacid recognition 3 136 4.2E-52 T 15-10-2018 IPR008599 Putative sugar diacid recognition VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 PIRSF PIRSF001399 3 149 1.8E-59 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 Pfam PF01220 Dehydroquinase class II 6 142 3.4E-61 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 SUPERFAMILY SSF52304 6 148 3.92E-62 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 6.2E-64 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 Gene3D G3DSA:3.40.50.9100 1 150 1.1E-66 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 149 3.0E-64 T 15-10-2018 VIBNI_A3301 60008aff8008336d499ccd64ed6ffda5 152 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 152 74.031 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VIBNI_A1499 cfe001522a53128ac7c87e65d93616f7 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 319 2.1E-40 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1299 f0130aeab6b2e184da73d1715b27b0f8 100 Gene3D G3DSA:3.30.70.920 6 75 1.7E-21 T 15-10-2018 VIBNI_B1299 f0130aeab6b2e184da73d1715b27b0f8 100 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.344 T 15-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VIBNI_B1299 f0130aeab6b2e184da73d1715b27b0f8 100 Pfam PF03927 NapD protein 6 80 6.0E-28 T 15-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VIBNI_A1206 8b13c4ccdc136060f4c455f8543bf8b8 106 Pfam PF05336 L-rhamnose mutarotase 3 104 1.4E-35 T 15-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 VIBNI_A1206 8b13c4ccdc136060f4c455f8543bf8b8 106 Gene3D G3DSA:3.30.70.100 1 93 1.3E-27 T 15-10-2018 VIBNI_A1206 8b13c4ccdc136060f4c455f8543bf8b8 106 SUPERFAMILY SSF54909 1 104 5.77E-31 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.4E-50 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 Gene3D G3DSA:3.40.50.300 214 412 1.2E-45 T 15-10-2018 VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 Pfam PF00271 Helicase conserved C-terminal domain 229 338 5.1E-28 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 SMART SM00490 257 338 1.4E-30 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 SUPERFAMILY SSF52540 73 358 1.12E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 SMART SM00487 20 221 8.6E-59 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_B0517 b6c92b9d37ab8bd78f524dd9ada219e0 416 Gene3D G3DSA:3.40.50.300 1 209 3.8E-77 T 15-10-2018 VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 SUPERFAMILY SSF50891 92 247 9.48E-28 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 4 222 6.5E-50 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 SUPERFAMILY SSF160467 4 95 3.01E-16 T 15-10-2018 VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 Gene3D G3DSA:3.30.1360.40 1 83 9.0E-15 T 15-10-2018 VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 SMART SM00796 3 224 3.1E-61 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VIBNI_B0748 bb3a42d31cb326fff38d0ec9280b9f91 291 Gene3D G3DSA:2.40.100.10 84 290 9.3E-55 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily VIBNI_B0458 9314d944b642f1363784160dde505a26 500 Pfam PF00005 ABC transporter 17 173 8.6E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0458 9314d944b642f1363784160dde505a26 500 SUPERFAMILY SSF52540 2 229 1.09E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0458 9314d944b642f1363784160dde505a26 500 Gene3D G3DSA:3.40.50.300 246 494 2.0E-37 T 15-10-2018 VIBNI_B0458 9314d944b642f1363784160dde505a26 500 Gene3D G3DSA:3.40.50.300 1 245 1.2E-55 T 15-10-2018 VIBNI_B0458 9314d944b642f1363784160dde505a26 500 SMART SM00382 26 220 3.2E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0458 9314d944b642f1363784160dde505a26 500 SMART SM00382 284 480 0.015 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0458 9314d944b642f1363784160dde505a26 500 Pfam PF00005 ABC transporter 276 429 4.4E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0458 9314d944b642f1363784160dde505a26 500 SUPERFAMILY SSF52540 264 487 9.02E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1299 791f702b2d52062c9779e7c31adbe1c2 456 Pfam PF03315 Serine dehydratase beta chain 3 153 1.4E-51 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VIBNI_A1299 791f702b2d52062c9779e7c31adbe1c2 456 SUPERFAMILY SSF143548 16 155 1.02E-42 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VIBNI_A1299 791f702b2d52062c9779e7c31adbe1c2 456 Gene3D G3DSA:3.30.1330.90 10 157 1.0E-48 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VIBNI_A1299 791f702b2d52062c9779e7c31adbe1c2 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 4.4E-199 T 15-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VIBNI_A1299 791f702b2d52062c9779e7c31adbe1c2 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 1.3E-95 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VIBNI_B0133 b32742b846696d6ac690e23ca3cff05a 179 Gene3D G3DSA:3.40.30.10 3 162 3.6E-21 T 15-10-2018 VIBNI_B0133 b32742b846696d6ac690e23ca3cff05a 179 SUPERFAMILY SSF52833 7 176 3.44E-29 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0133 b32742b846696d6ac690e23ca3cff05a 179 Pfam PF08534 Redoxin 8 150 1.5E-18 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VIBNI_B0454 f545b30d62b0b361ec5e66f3d4d898e5 249 SMART SM00893 23 211 6.9E-57 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B0454 f545b30d62b0b361ec5e66f3d4d898e5 249 Pfam PF01012 Electron transfer flavoprotein domain 29 204 6.5E-44 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B0454 f545b30d62b0b361ec5e66f3d4d898e5 249 Gene3D G3DSA:3.40.50.620 1 247 2.8E-83 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B0454 f545b30d62b0b361ec5e66f3d4d898e5 249 SUPERFAMILY SSF52402 1 242 5.02E-80 T 15-10-2018 VIBNI_B0454 f545b30d62b0b361ec5e66f3d4d898e5 249 PIRSF PIRSF000090 1 248 3.5E-80 T 15-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 SUPERFAMILY SSF52172 9 184 2.88E-33 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 Pfam PF00072 Response regulator receiver domain 13 120 1.1E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.0E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 SMART SM00448 10 120 1.0E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 Gene3D G3DSA:1.10.10.10 128 238 3.7E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 SMART SM00862 158 234 7.8E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0838 e3a3049c2519f54cf0421293523a7c2b 239 Gene3D G3DSA:3.40.50.2300 2 127 1.8E-29 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 SUPERFAMILY SSF52317 1 191 4.06E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.6E-5 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.6E-5 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 7.2E-88 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 4.0E-56 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.3E-36 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 Gene3D G3DSA:3.40.50.880 1 192 1.0E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-13 T 15-10-2018 VIBNI_A3557 b44edcfc47daa0dea6079d0971b5eba7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 15-10-2018 VIBNI_A3743 0dcaf0b1baa8e1ad0b50a1fe96dbfc17 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 1.5E-27 T 15-10-2018 IPR019620 Putative metal-binding protein VIBNI_A3743 0dcaf0b1baa8e1ad0b50a1fe96dbfc17 78 Pfam PF10678 Protein of unknown function (DUF2492) 3 77 1.3E-25 T 15-10-2018 IPR019620 Putative metal-binding protein VIBNI_A0572 3e27a194aaa302635e10929ede1b57f5 334 SUPERFAMILY SSF143631 23 332 7.59E-103 T 15-10-2018 IPR003374 ApbE-like superfamily VIBNI_A0572 3e27a194aaa302635e10929ede1b57f5 334 Gene3D G3DSA:3.10.520.20 15 334 6.9E-114 T 15-10-2018 VIBNI_A0572 3e27a194aaa302635e10929ede1b57f5 334 Pfam PF02424 ApbE family 31 311 1.2E-84 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VIBNI_A0572 3e27a194aaa302635e10929ede1b57f5 334 PIRSF PIRSF006268 1 334 6.3E-96 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VIBNI_B0884 9a355b602a2d4edab7185228b570bb7f 254 Gene3D G3DSA:2.40.30.10 1 113 8.9E-24 T 15-10-2018 VIBNI_B0884 9a355b602a2d4edab7185228b570bb7f 254 Pfam PF04954 Siderophore-interacting protein 121 235 1.3E-30 T 15-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VIBNI_B0884 9a355b602a2d4edab7185228b570bb7f 254 Gene3D G3DSA:3.40.50.80 115 254 1.2E-43 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_B0884 9a355b602a2d4edab7185228b570bb7f 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 7 113 9.1E-23 T 15-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VIBNI_B0884 9a355b602a2d4edab7185228b570bb7f 254 SUPERFAMILY SSF63380 4 111 1.63E-10 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 SUPERFAMILY SSF51735 106 288 1.85E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 Gene3D G3DSA:3.40.50.720 2 306 1.6E-113 T 15-10-2018 VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 318 1.8E-14 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 288 1.6E-50 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 SUPERFAMILY SSF52283 2 124 1.51E-18 T 15-10-2018 VIBNI_B1944 7b38bc5bf75aeb0fe712ca94204badcf 326 Gene3D G3DSA:3.40.50.720 102 291 1.6E-113 T 15-10-2018 VIBNI_B1420 c3f0ef7b89e8f5d79ac4ca5fa60a8b9c 313 Gene3D G3DSA:3.40.50.1820 30 313 3.2E-87 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1420 c3f0ef7b89e8f5d79ac4ca5fa60a8b9c 313 SUPERFAMILY SSF53474 32 309 2.68E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1420 c3f0ef7b89e8f5d79ac4ca5fa60a8b9c 313 Pfam PF00561 alpha/beta hydrolase fold 37 193 8.3E-14 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 51 66 7.6E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 266 278 7.6E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 133 147 7.6E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 Gene3D G3DSA:2.40.10.10 36 159 7.0E-18 T 15-10-2018 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 267 278 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 Gene3D G3DSA:2.40.10.10 160 323 6.9E-23 T 15-10-2018 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 SMART SM00020 21 321 7.7E-30 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 61 66 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 SUPERFAMILY SSF50494 16 326 1.02E-40 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_A0423 b27d2be903a8ba5afd27eba17691b016 391 Pfam PF00089 Trypsin 36 321 8.2E-30 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 ProSitePatterns PS00163 Fumarate lyases signature. 331 340 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 Gene3D G3DSA:1.10.275.10 17 153 4.6E-58 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 17 483 2.3E-254 T 15-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 Gene3D G3DSA:1.10.40.30 422 471 4.7E-29 T 15-10-2018 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 SUPERFAMILY SSF48557 14 469 8.39E-143 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 Gene3D G3DSA:1.20.200.10 154 421 1.8E-112 T 15-10-2018 VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 Pfam PF00206 Lyase 24 356 5.6E-103 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 9.5E-26 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 PRINTS PR00149 Fumarate lyase superfamily signature 194 212 9.5E-26 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 PRINTS PR00149 Fumarate lyase superfamily signature 285 312 9.5E-26 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 PRINTS PR00149 Fumarate lyase superfamily signature 331 347 9.5E-26 T 15-10-2018 IPR000362 Fumarate lyase family VIBNI_A3278 686363a2e47445e0f5c01785d0049739 484 Pfam PF10415 Fumarase C C-terminus 422 475 4.5E-17 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VIBNI_A1719 99053b3abd646fff7c5eb9b46edbd50d 401 Gene3D G3DSA:1.20.1250.20 218 400 1.1E-15 T 15-10-2018 VIBNI_A1719 99053b3abd646fff7c5eb9b46edbd50d 401 Gene3D G3DSA:1.20.1250.20 11 203 5.0E-19 T 15-10-2018 VIBNI_A1719 99053b3abd646fff7c5eb9b46edbd50d 401 Pfam PF07690 Major Facilitator Superfamily 25 338 5.7E-23 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A1719 99053b3abd646fff7c5eb9b46edbd50d 401 SUPERFAMILY SSF103473 9 398 5.89E-43 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 SUPERFAMILY SSF56053 1 82 2.88E-25 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 SUPERFAMILY SSF56053 83 177 3.74E-35 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.9E-74 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 Gene3D G3DSA:3.90.930.12 1 82 9.3E-31 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 15-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 PIRSF PIRSF002162 1 177 2.0E-44 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 Pfam PF00347 Ribosomal protein L6 91 164 2.8E-19 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 Pfam PF00347 Ribosomal protein L6 11 82 1.5E-21 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 Gene3D G3DSA:3.90.930.12 83 177 1.5E-39 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3163 2e551d835a9d464225e72e3a61d3e646 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.779 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 PIRSF PIRSF039085 1 244 9.8E-106 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 Gene3D G3DSA:3.40.50.300 1 243 2.1E-75 T 15-10-2018 VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 SUPERFAMILY SSF52540 1 238 2.13E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 SMART SM00382 26 216 2.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3889 e23ef1a37ecb432fbf1c0353ff25b694 245 Pfam PF00005 ABC transporter 17 168 6.6E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 2.1E-23 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.3E-75 T 15-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Gene3D G3DSA:3.30.230.40 257 357 2.5E-35 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Gene3D G3DSA:3.30.230.40 165 256 6.3E-37 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 49.947 T 15-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 4.1E-44 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.382 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 4.7E-5 T 15-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 SUPERFAMILY SSF54211 169 253 1.9E-32 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 SUPERFAMILY SSF56784 3 158 1.31E-36 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Gene3D G3DSA:3.40.50.1000 1 164 2.6E-43 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.7E-65 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VIBNI_A2289 853e641d05fb82f4e2881fa06b895b2f 357 SUPERFAMILY SSF54211 254 344 6.07E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 SUPERFAMILY SSF46785 3 79 8.25E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.9E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 SUPERFAMILY SSF53850 88 292 1.63E-41 T 15-10-2018 VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 Gene3D G3DSA:1.10.10.10 1 87 1.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 Gene3D G3DSA:3.40.190.290 89 289 3.1E-52 T 15-10-2018 VIBNI_B2071 406380e9db6d37b155a0a07c631525a8 300 Pfam PF03466 LysR substrate binding domain 88 288 1.7E-40 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Gene3D G3DSA:2.30.130.10 249 311 5.5E-24 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.982 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 SUPERFAMILY SSF55120 9 247 2.04E-82 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.1E-56 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.8E-84 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.0E-22 T 15-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 1.1E-19 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 Gene3D G3DSA:3.30.2350.10 2 248 1.1E-92 T 15-10-2018 VIBNI_A2795 caccb26ad497cb91c8d01df90f2b6d07 314 SUPERFAMILY SSF88697 250 310 3.53E-15 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_A0567 e3a9fa00fcd1393a78f71c3b6651b77a 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 7.9E-107 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VIBNI_A0567 e3a9fa00fcd1393a78f71c3b6651b77a 414 PIRSF PIRSF016055 1 414 1.2E-198 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VIBNI_A0567 e3a9fa00fcd1393a78f71c3b6651b77a 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.62 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VIBNI_A0567 e3a9fa00fcd1393a78f71c3b6651b77a 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.8E-199 T 15-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 SUPERFAMILY SSF46785 1 110 6.64E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 Gene3D G3DSA:3.40.190.10 164 267 6.4E-68 T 15-10-2018 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 Pfam PF03466 LysR substrate binding domain 88 291 5.5E-45 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 Gene3D G3DSA:1.10.10.10 1 84 2.3E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 SUPERFAMILY SSF53850 88 292 1.16E-39 T 15-10-2018 VIBNI_A3587 a39ac1d18f5d4bdcd163a00d4b6573ff 293 Gene3D G3DSA:3.40.190.10 91 281 6.4E-68 T 15-10-2018 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 79 1.4E-19 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 SUPERFAMILY SSF53697 107 290 1.13E-33 T 15-10-2018 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 Pfam PF01380 SIS domain 135 236 1.7E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 SUPERFAMILY SSF46689 8 78 1.02E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 Gene3D G3DSA:3.40.50.10490 103 292 1.9E-36 T 15-10-2018 VIBNI_A0477 87b8034734b59197edd27592012e77d6 301 Gene3D G3DSA:1.10.10.10 4 81 4.9E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2416 3db744a609c9638830fc947fa086f938 404 SUPERFAMILY SSF53383 6 399 2.66E-95 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2416 3db744a609c9638830fc947fa086f938 404 Pfam PF00155 Aminotransferase class I and II 61 393 2.2E-49 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A2416 3db744a609c9638830fc947fa086f938 404 Gene3D G3DSA:3.90.1150.10 21 398 3.6E-145 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2416 3db744a609c9638830fc947fa086f938 404 Gene3D G3DSA:3.40.640.10 53 294 3.6E-145 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0578 ed49c18e442928b16646279a65efd753 263 Gene3D G3DSA:1.10.3720.10 2 259 2.5E-56 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0578 ed49c18e442928b16646279a65efd753 263 SUPERFAMILY SSF161098 4 254 9.35E-49 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0578 ed49c18e442928b16646279a65efd753 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 252 2.1E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 Gene3D G3DSA:2.20.150.10 20 114 1.8E-74 T 15-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 Gene3D G3DSA:3.40.1190.20 15 308 1.8E-74 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 Pfam PF00294 pfkB family carbohydrate kinase 15 312 2.6E-51 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 329 1.7E-95 T 15-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 VIBNI_A2160 f48ca2ae53e9020ca13f1f0a340fe39a 351 SUPERFAMILY SSF53613 12 329 4.84E-63 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B1516 1e8ab70be27684353835eda892316801 124 Gene3D G3DSA:3.10.180.10 9 124 1.2E-15 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1516 1e8ab70be27684353835eda892316801 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 120 5.9E-5 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B1516 1e8ab70be27684353835eda892316801 124 SUPERFAMILY SSF54593 15 123 3.09E-22 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0597 4753f26ce3785dcfb9946d3088074a0c 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 7.5E-20 T 15-10-2018 IPR025346 Protein of unknown function DUF4250 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 SUPERFAMILY SSF50331 238 367 2.43E-24 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 SMART SM00382 30 213 1.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 Gene3D G3DSA:3.40.50.300 3 223 7.7E-72 T 15-10-2018 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 SUPERFAMILY SSF52540 4 244 6.21E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 Pfam PF08402 TOBE domain 287 359 2.7E-4 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 Pfam PF00005 ABC transporter 21 163 1.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 Gene3D G3DSA:2.40.50.940 224 360 1.9E-30 T 15-10-2018 VIBNI_A2444 ccd379d58b71eeb7ac203ccaba5f0d01 369 Gene3D G3DSA:2.40.50.140 293 351 1.9E-30 T 15-10-2018 VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 SMART SM00382 29 239 2.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 251 2.0E-89 T 15-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 Pfam PF00005 ABC transporter 20 182 1.3E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 Gene3D G3DSA:3.40.50.300 4 260 2.4E-62 T 15-10-2018 VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 SUPERFAMILY SSF52540 4 243 1.02E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0029 5de7ffb2b8b2ffbbec8923d26275ddea 289 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3129 ebb36436a463abf56c1c92b1ffc98be5 237 SMART SM00382 37 230 2.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3129 ebb36436a463abf56c1c92b1ffc98be5 237 SUPERFAMILY SSF52540 32 226 6.91E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3129 ebb36436a463abf56c1c92b1ffc98be5 237 Pfam PF00005 ABC transporter 32 182 2.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3129 ebb36436a463abf56c1c92b1ffc98be5 237 Gene3D G3DSA:3.40.50.300 9 233 2.0E-54 T 15-10-2018 VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 SUPERFAMILY SSF141986 194 333 1.7E-28 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 SUPERFAMILY SSF52317 1 154 6.41E-37 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 PIRSF PIRSF028757 1 343 6.9E-65 T 15-10-2018 IPR003507 Peptidase family S66 VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 Pfam PF02016 LD-carboxypeptidase 13 328 2.4E-68 T 15-10-2018 IPR003507 Peptidase family S66 VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 Gene3D G3DSA:3.50.30.60 169 343 5.0E-34 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VIBNI_B0800 a427ee47f0f3cfe6334dd19ec07cf83f 343 Gene3D G3DSA:3.40.50.10740 1 159 6.2E-40 T 15-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VIBNI_A2618 5b991c1aecd00c3086ed05a9a2f04f19 218 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 212 2.9E-37 T 15-10-2018 IPR018635 Uncharacterised protein family UPF0319 VIBNI_A3835 358b809f88c753d8c064ae620a006211 360 Pfam PF01476 LysM domain 37 83 1.3E-12 T 15-10-2018 IPR018392 LysM domain VIBNI_A3835 358b809f88c753d8c064ae620a006211 360 SUPERFAMILY SSF54106 35 83 3.79E-7 T 15-10-2018 VIBNI_A3835 358b809f88c753d8c064ae620a006211 360 SMART SM00257 36 84 2.5E-5 T 15-10-2018 IPR018392 LysM domain VIBNI_A3835 358b809f88c753d8c064ae620a006211 360 Gene3D G3DSA:3.10.350.10 35 82 1.8E-14 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_B0224 a12bc608b45c60dd8766e6f6ae3eeb68 293 SUPERFAMILY SSF161098 7 293 2.49E-54 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0224 a12bc608b45c60dd8766e6f6ae3eeb68 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 286 2.7E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0224 a12bc608b45c60dd8766e6f6ae3eeb68 293 Gene3D G3DSA:1.10.3720.10 3 284 8.2E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 Pfam PF03150 Di-haem cytochrome c peroxidase 38 185 4.0E-48 T 15-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 PIRSF PIRSF000294 4 327 1.1E-125 T 15-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 Gene3D G3DSA:1.10.760.10 36 309 1.6E-110 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 Pfam PF00034 Cytochrome c 193 303 9.3E-12 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 SUPERFAMILY SSF46626 172 323 2.41E-42 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 SUPERFAMILY SSF46626 21 173 4.71E-47 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3700 bd746ea3f7834b7d5908928128bb68a1 328 Gene3D G3DSA:1.10.760.10 38 185 1.6E-110 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A0798 426177a0dc20af7b45cd1f81f5afe659 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 287 6.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0798 426177a0dc20af7b45cd1f81f5afe659 296 SUPERFAMILY SSF161098 58 285 3.4E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0798 426177a0dc20af7b45cd1f81f5afe659 296 Gene3D G3DSA:1.10.3720.10 54 296 2.2E-71 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0010 325efc540a51141151271bd78923d268 688 SUPERFAMILY SSF109604 351 488 6.28E-11 T 15-10-2018 VIBNI_A0010 325efc540a51141151271bd78923d268 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.1E-295 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 26.14 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 1.7E-206 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 Pfam PF05746 DALR anticodon binding domain 580 677 2.9E-10 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VIBNI_A0010 325efc540a51141151271bd78923d268 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 3.6E-36 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 3.6E-36 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 3.6E-36 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 3.6E-36 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A0010 325efc540a51141151271bd78923d268 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 3.6E-36 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 SUPERFAMILY SSF53850 6 220 9.5E-87 T 15-10-2018 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.25 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 SUPERFAMILY SSF54782 221 310 3.92E-27 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PIRSF PIRSF001438 1 312 6.6E-124 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 15-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Gene3D G3DSA:3.40.190.10 104 203 5.7E-86 T 15-10-2018 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 6.0E-48 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 6.0E-48 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 6.0E-48 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 6.0E-48 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 6.0E-48 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.8E-20 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Gene3D G3DSA:3.30.160.40 222 307 9.6E-29 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Gene3D G3DSA:3.40.190.10 7 211 5.7E-86 T 15-10-2018 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 1.2E-115 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_A3771 ddb5e459382de914fef8a0b23854cfeb 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.7E-80 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VIBNI_B1976 4a24aab554d3591a633dc330c70992e4 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 283 9.5E-153 T 15-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 VIBNI_B1976 4a24aab554d3591a633dc330c70992e4 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 281 1.0E-65 T 15-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VIBNI_B1976 4a24aab554d3591a633dc330c70992e4 283 Gene3D G3DSA:3.40.830.10 1 283 1.4E-80 T 15-10-2018 VIBNI_B1976 4a24aab554d3591a633dc330c70992e4 283 SUPERFAMILY SSF53213 12 281 2.22E-52 T 15-10-2018 VIBNI_B0792 4984a8710db06550aa7aa1cc26f06c69 148 Gene3D G3DSA:3.90.79.10 8 144 8.4E-13 T 15-10-2018 VIBNI_B0792 4984a8710db06550aa7aa1cc26f06c69 148 SUPERFAMILY SSF55811 16 142 8.94E-15 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_B0792 4984a8710db06550aa7aa1cc26f06c69 148 Pfam PF00293 NUDIX domain 20 124 2.5E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 SMART SM00421 262 319 9.1E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 Gene3D G3DSA:1.10.10.10 237 323 1.9E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 Pfam PF00196 Bacterial regulatory proteins, luxR family 264 318 3.2E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 279 9.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 307 9.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 279 295 9.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 ProSitePatterns PS00622 LuxR-type HTH domain signature. 279 306 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A0436 f7ff0fb0364d90849c20558ef1dc660c 324 SUPERFAMILY SSF46894 252 320 2.86E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1796 15e4462f8ffbe9a34948abf9e3ada3fe 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 402 4.0E-109 T 15-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VIBNI_A1796 15e4462f8ffbe9a34948abf9e3ada3fe 415 Pfam PF04403 Paraquat-inducible protein A 55 205 2.7E-35 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like VIBNI_A1796 15e4462f8ffbe9a34948abf9e3ada3fe 415 Pfam PF04403 Paraquat-inducible protein A 248 403 5.1E-50 T 15-10-2018 IPR007498 Intermembrane transport protein PqiA-like VIBNI_A2538 88d582191f892614778a77a67a405993 360 Gene3D G3DSA:2.40.390.10 221 342 1.9E-5 T 15-10-2018 IPR024071 Protein of unknown function DUF917, C-terminal VIBNI_A2538 88d582191f892614778a77a67a405993 360 Pfam PF06032 Protein of unknown function (DUF917) 7 356 2.5E-132 T 15-10-2018 IPR010318 Protein of unknown function DUF917 VIBNI_A2538 88d582191f892614778a77a67a405993 360 Gene3D G3DSA:3.40.1610.10 2 220 2.8E-62 T 15-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal VIBNI_A2538 88d582191f892614778a77a67a405993 360 SUPERFAMILY SSF160991 1 356 9.42E-122 T 15-10-2018 VIBNI_B0474 8f8e1ac4dcaab2b0dcab901c17f054e8 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 308 4.9E-27 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0474 8f8e1ac4dcaab2b0dcab901c17f054e8 343 SUPERFAMILY SSF53850 115 232 2.31E-6 T 15-10-2018 VIBNI_B0474 8f8e1ac4dcaab2b0dcab901c17f054e8 343 Gene3D G3DSA:3.40.190.170 28 342 1.6E-82 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A0744 1200a9a1ce09e6e38bfa999d55b423c2 240 SUPERFAMILY SSF75708 29 239 3.01E-67 T 15-10-2018 VIBNI_A0744 1200a9a1ce09e6e38bfa999d55b423c2 240 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 240 2.6E-79 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VIBNI_A0744 1200a9a1ce09e6e38bfa999d55b423c2 240 Gene3D G3DSA:1.10.287.500 55 189 2.8E-48 T 15-10-2018 VIBNI_A0744 1200a9a1ce09e6e38bfa999d55b423c2 240 PIRSF PIRSF002884 13 240 2.4E-88 T 15-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 15-10-2018 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3185 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 SUPERFAMILY SSF51726 1 354 4.97E-124 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 9.3E-141 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 Gene3D G3DSA:3.20.20.210 1 355 2.0E-160 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.766 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VIBNI_A3322 462ebbdc90fef710311a9fdd63382919 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.5E-142 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VIBNI_A2668 e58b18440aa69e265440797211c4106d 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.2E-56 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VIBNI_A2668 e58b18440aa69e265440797211c4106d 160 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 7.6E-23 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A2668 e58b18440aa69e265440797211c4106d 160 SUPERFAMILY SSF55826 2 156 6.41E-44 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A2668 e58b18440aa69e265440797211c4106d 160 Gene3D G3DSA:3.90.960.10 1 157 1.4E-56 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A2668 e58b18440aa69e265440797211c4106d 160 PIRSF PIRSF006181 1 159 2.1E-52 T 15-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 Gene3D G3DSA:3.30.1300.30 35 123 1.3E-28 T 15-10-2018 VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 SUPERFAMILY SSF54523 42 120 2.04E-20 T 15-10-2018 VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 Pfam PF02501 Type II secretion system (T2SS), protein I 45 120 2.0E-20 T 15-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.0E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 28 1.0E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A3374 9ccd7338fe1a841bf553c4b5d4d14442 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 11 107 3.0E-31 T 15-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VIBNI_B1615 8b5a56fe961139995d02905bdee81e1f 375 Pfam PF00534 Glycosyl transferases group 1 187 348 2.8E-39 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_B1615 8b5a56fe961139995d02905bdee81e1f 375 Gene3D G3DSA:3.40.50.2000 189 355 1.2E-43 T 15-10-2018 VIBNI_B1615 8b5a56fe961139995d02905bdee81e1f 375 Pfam PF13439 Glycosyltransferase Family 4 66 179 1.2E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_B1615 8b5a56fe961139995d02905bdee81e1f 375 Gene3D G3DSA:3.40.50.2000 16 188 1.3E-20 T 15-10-2018 VIBNI_B1615 8b5a56fe961139995d02905bdee81e1f 375 SUPERFAMILY SSF53756 64 373 4.11E-76 T 15-10-2018 VIBNI_A3486 c6fc5507662c41fb5fa59604a5b8479d 179 Pfam PF01569 PAP2 superfamily 84 154 1.6E-12 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_A3486 c6fc5507662c41fb5fa59604a5b8479d 179 SMART SM00014 55 154 3.6E-10 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_A3486 c6fc5507662c41fb5fa59604a5b8479d 179 SUPERFAMILY SSF48317 31 155 1.44E-26 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VIBNI_A3486 c6fc5507662c41fb5fa59604a5b8479d 179 Gene3D G3DSA:1.20.144.10 84 163 2.3E-14 T 15-10-2018 VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 SMART SM00382 35 244 9.5E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 Pfam PF00005 ABC transporter 26 186 1.2E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 270 5.7E-6 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 SUPERFAMILY SSF52540 6 257 1.6E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1120 b5abf1e530d686882b16c0b7260699fd 288 Gene3D G3DSA:3.40.50.300 4 283 6.1E-90 T 15-10-2018 VIBNI_A2486 96ef708540f1ad2684f9d3c3522e9713 90 SUPERFAMILY SSF46626 4 90 2.87E-22 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2486 96ef708540f1ad2684f9d3c3522e9713 90 Gene3D G3DSA:1.10.760.10 8 90 1.4E-25 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2486 96ef708540f1ad2684f9d3c3522e9713 90 Pfam PF00034 Cytochrome c 18 90 2.7E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2316 c8382d9bf3e9239781367c2130b63be0 268 SUPERFAMILY SSF53335 19 205 1.48E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2316 c8382d9bf3e9239781367c2130b63be0 268 Gene3D G3DSA:3.40.50.150 19 218 2.0E-37 T 15-10-2018 VIBNI_A2316 c8382d9bf3e9239781367c2130b63be0 268 Pfam PF08241 Methyltransferase domain 57 149 2.1E-26 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VIBNI_A2316 c8382d9bf3e9239781367c2130b63be0 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 30.526 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VIBNI_A2316 c8382d9bf3e9239781367c2130b63be0 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 263 1.5E-65 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VIBNI_A0200 02e8d7b8c28e40f31e5f07bd1e22d22e 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 2.8E-67 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VIBNI_A0200 02e8d7b8c28e40f31e5f07bd1e22d22e 195 SUPERFAMILY SSF53474 4 194 1.25E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0200 02e8d7b8c28e40f31e5f07bd1e22d22e 195 Gene3D G3DSA:3.40.50.1820 7 195 1.2E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1755 ac21f0b908a62c491176348ade4cef6b 218 SUPERFAMILY SSF51569 6 206 1.01E-50 T 15-10-2018 VIBNI_A1755 ac21f0b908a62c491176348ade4cef6b 218 Pfam PF01081 KDPG and KHG aldolase 12 182 2.0E-29 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VIBNI_A1755 ac21f0b908a62c491176348ade4cef6b 218 Gene3D G3DSA:3.20.20.70 7 212 1.9E-55 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 84 104 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 178 200 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 120 146 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 16 44 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 58 81 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 207 233 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 PRINTS PR00169 Potassium channel signature 149 172 2.9E-37 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 SUPERFAMILY SSF81324 23 233 1.14E-52 T 15-10-2018 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 Gene3D G3DSA:1.10.287.70 22 235 1.4E-56 T 15-10-2018 VIBNI_A0886 d45ded5da752e335c63a48c308769805 287 Pfam PF00520 Ion transport protein 23 235 2.8E-30 T 15-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VIBNI_A0211 6320a2c310a9a7099e0b87b977028697 245 Pfam PF02167 Cytochrome C1 family 104 244 1.6E-10 T 15-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VIBNI_A0211 6320a2c310a9a7099e0b87b977028697 245 SUPERFAMILY SSF46626 16 208 2.01E-45 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A0211 6320a2c310a9a7099e0b87b977028697 245 Gene3D G3DSA:1.10.760.10 26 210 5.7E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B0311 d43f79274f48eb488f05a1026bc49f8d 523 Gene3D G3DSA:3.40.50.1110 2 217 4.7E-6 T 15-10-2018 IPR036514 SGNH hydrolase superfamily VIBNI_B0311 d43f79274f48eb488f05a1026bc49f8d 523 SUPERFAMILY SSF52266 1 166 5.5E-6 T 15-10-2018 VIBNI_A3843 4ab13cdf0f7ee275e94087a39d834e78 87 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.0E-46 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 VIBNI_A3843 4ab13cdf0f7ee275e94087a39d834e78 87 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-39 T 15-10-2018 IPR009383 Protein of unknown function DUF1040 VIBNI_A3843 4ab13cdf0f7ee275e94087a39d834e78 87 Gene3D G3DSA:1.10.1580.20 1 87 3.0E-43 T 15-10-2018 IPR038134 YihD-like superfamily VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 SUPERFAMILY SSF53474 4 265 5.18E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 Gene3D G3DSA:3.40.50.1820 3 266 1.7E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.3E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.3E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 1.3E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.3E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1154 5de31d52de8569174638318d3bc34ccd 268 Pfam PF00561 alpha/beta hydrolase fold 23 144 3.6E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B0372 edffa71c1b0b390f3e0725b35a232485 121 Gene3D G3DSA:3.90.1150.30 1 120 9.1E-11 T 15-10-2018 IPR038056 YjbR-like superfamily VIBNI_B0372 edffa71c1b0b390f3e0725b35a232485 121 Pfam PF04237 YjbR 12 102 6.6E-14 T 15-10-2018 IPR007351 Uncharacterised protein YjbR VIBNI_B0372 edffa71c1b0b390f3e0725b35a232485 121 SUPERFAMILY SSF142906 1 118 7.85E-30 T 15-10-2018 IPR038056 YjbR-like superfamily VIBNI_B0595 7ae38512f7db73d96f0db1cc4ba4f59c 225 Pfam PF01730 UreF 42 182 2.7E-41 T 15-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VIBNI_B0595 7ae38512f7db73d96f0db1cc4ba4f59c 225 Gene3D G3DSA:1.10.4190.10 7 204 2.1E-54 T 15-10-2018 IPR038277 UreF domain superfamily VIBNI_B0595 7ae38512f7db73d96f0db1cc4ba4f59c 225 PIRSF PIRSF009467 8 225 3.9E-65 T 15-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VIBNI_B0595 7ae38512f7db73d96f0db1cc4ba4f59c 225 Hamap MF_01385 Urease accessory protein UreF [ureF]. 10 225 31.474 T 15-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VIBNI_A1477 23d2eea4a96ccf263d02f1986bab9195 500 Pfam PF13807 G-rich domain on putative tyrosine kinase 364 444 1.4E-7 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain VIBNI_A1911 bc5301d6105ed3baea61b64671b9e64d 445 Pfam PF06629 MltA-interacting protein MipA 49 246 3.5E-18 T 15-10-2018 IPR010583 MltA-interacting MipA VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 SUPERFAMILY SSF52540 4 226 7.14E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 Gene3D G3DSA:3.40.50.300 260 498 1.0E-40 T 15-10-2018 VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 Gene3D G3DSA:3.40.50.300 2 236 3.7E-49 T 15-10-2018 VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 Pfam PF00005 ABC transporter 22 169 2.8E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 SUPERFAMILY SSF52540 271 492 2.19E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 Pfam PF00005 ABC transporter 273 425 2.5E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 SMART SM00382 30 218 4.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0996 97db147e1a2c040d3d4b99650f7c7109 500 SMART SM00382 281 474 1.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1608 c524c7e91ef66d44b6ac5cab8fecd15c 194 Gene3D G3DSA:1.10.3600.10 7 114 1.4E-5 T 15-10-2018 IPR037042 Putative bacterial toxin ydaT superfamily VIBNI_A1608 c524c7e91ef66d44b6ac5cab8fecd15c 194 Pfam PF06254 Putative bacterial toxin ydaT 64 105 4.6E-4 T 15-10-2018 IPR009364 Putative bacterial toxin ydaT VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 Gene3D G3DSA:3.30.1240.10 90 195 1.7E-74 T 15-10-2018 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 268 4.9E-63 T 15-10-2018 IPR000150 Cof family GO:0016787 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 15-10-2018 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 268 5.8E-66 T 15-10-2018 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 SUPERFAMILY SSF56784 9 273 4.07E-69 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 15-10-2018 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 239 4.7E-30 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_A3758 7935a375acabeb979789c67d5e2fa87f 276 Gene3D G3DSA:3.40.50.1000 13 264 1.7E-74 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 SUPERFAMILY SSF51569 5 423 1.78E-160 T 15-10-2018 VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 7.3E-197 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 PIRSF PIRSF009264 1 426 1.9E-188 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 Gene3D G3DSA:3.20.20.70 8 415 4.4E-175 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 Gene3D G3DSA:1.10.400.20 287 410 4.4E-175 T 15-10-2018 VIBNI_B0993 b38adf7134cee0b2f3f8d042ca37eb07 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 6.8E-196 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_B0378 efa0d7062e65be84b63572eb25184e8c 119 Pfam PF12680 SnoaL-like domain 7 97 3.1E-14 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_B0378 efa0d7062e65be84b63572eb25184e8c 119 Gene3D G3DSA:3.10.450.50 1 117 3.2E-23 T 15-10-2018 VIBNI_B0378 efa0d7062e65be84b63572eb25184e8c 119 SUPERFAMILY SSF54427 1 116 1.76E-27 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0688 c22d994ee5acd267080906d404b03f06 280 SUPERFAMILY SSF48452 44 192 1.9E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0688 c22d994ee5acd267080906d404b03f06 280 Pfam PF13432 Tetratricopeptide repeat 108 163 3.5E-6 T 15-10-2018 VIBNI_B0688 c22d994ee5acd267080906d404b03f06 280 Gene3D G3DSA:1.25.40.10 30 219 2.3E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1681 bdd02e97d9ec2e124e79dee3292f230b 493 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 307 7.9E-19 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_B1681 bdd02e97d9ec2e124e79dee3292f230b 493 Gene3D G3DSA:3.40.190.10 106 312 2.2E-24 T 15-10-2018 VIBNI_B1681 bdd02e97d9ec2e124e79dee3292f230b 493 Pfam PF12793 Sugar transport-related sRNA regulator N-term 8 114 2.5E-22 T 15-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VIBNI_B1681 bdd02e97d9ec2e124e79dee3292f230b 493 SUPERFAMILY SSF53850 123 306 3.8E-32 T 15-10-2018 VIBNI_A1075 84498ee131e49006cdd1c7f7f64a8e60 413 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 3 413 2.6E-194 T 15-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VIBNI_A1075 84498ee131e49006cdd1c7f7f64a8e60 413 Pfam PF12704 MacB-like periplasmic core domain 29 233 1.3E-10 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A1075 84498ee131e49006cdd1c7f7f64a8e60 413 Pfam PF02687 FtsX-like permease family 299 406 3.6E-12 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A1075 84498ee131e49006cdd1c7f7f64a8e60 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 412 3.0E-148 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VIBNI_A3369 bb86beb6bb13b0517e9f49d189d9c4d4 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 246 4.0E-56 T 15-10-2018 IPR022792 Type II secretion system, protein N VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 129 181 7.2E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 6.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 6.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.4E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 SUPERFAMILY SSF56784 1 211 1.65E-42 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 Gene3D G3DSA:1.10.150.240 16 79 7.4E-35 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 180 1.4E-23 T 15-10-2018 VIBNI_B2085 03e1395c28ab720cda12c5e50835d575 221 Gene3D G3DSA:3.40.50.1000 4 182 7.4E-35 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Gene3D G3DSA:2.60.40.10 682 769 1.0E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 SUPERFAMILY SSF49313 684 770 2.2E-18 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 SUPERFAMILY SSF51055 772 827 1.31E-13 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 237 409 1.1E-35 T 15-10-2018 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 SMART SM00495 779 824 1.9E-13 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Gene3D G3DSA:3.40.390.10 236 449 2.8E-22 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 SUPERFAMILY SSF55486 236 440 7.94E-27 T 15-10-2018 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 SMART SM00736 685 775 1.9E-6 T 15-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Pfam PF05345 Putative Ig domain 723 756 5.9E-5 T 15-10-2018 IPR008009 Putative Ig VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Gene3D G3DSA:2.60.40.10 452 577 8.1E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2166 421c1b4a8fd5c1ebe223f8e5e9b9c553 829 Gene3D G3DSA:2.10.10.20 775 827 4.8E-14 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 4.5E-117 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 Gene3D G3DSA:1.10.3860.10 5 418 2.6E-115 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-44 T 15-10-2018 VIBNI_A1270 322d8f59417e31135833521428b056b9 419 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 40 55 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site VIBNI_A1270 322d8f59417e31135833521428b056b9 419 SUPERFAMILY SSF118215 15 403 9.02E-107 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 Pfam PF00005 ABC transporter 45 193 1.1E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 SUPERFAMILY SSF52540 39 265 2.38E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 Gene3D G3DSA:3.10.580.10 274 393 1.5E-6 T 15-10-2018 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 SMART SM00382 54 242 3.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 SUPERFAMILY SSF54631 275 397 1.29E-10 T 15-10-2018 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 Gene3D G3DSA:3.40.50.300 32 270 3.5E-68 T 15-10-2018 VIBNI_B0640 0a5ebf935a214a832d0cffa6bd34420e 407 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 393 1.0E-123 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 SUPERFAMILY SSF56672 86 387 9.34E-9 T 15-10-2018 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 224 238 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 323 336 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 240 258 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 305 318 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 179 192 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 390 396 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 338 349 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 193 205 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 259 269 7.3E-50 T 15-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VIBNI_B1918 320684fd0e601f0b9022ca4bc70ab787 599 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 184 394 6.8E-26 T 15-10-2018 IPR000477 Reverse transcriptase domain VIBNI_A3047 baf74f176f31459e4c50cfee631bda35 274 Gene3D G3DSA:1.10.3210.10 2 274 2.2E-66 T 15-10-2018 VIBNI_A3047 baf74f176f31459e4c50cfee631bda35 274 SUPERFAMILY SSF109604 5 232 1.57E-56 T 15-10-2018 VIBNI_A3047 baf74f176f31459e4c50cfee631bda35 274 Pfam PF08668 HDOD domain 13 201 2.1E-52 T 15-10-2018 IPR013976 Metal-dependent hydrolase HDOD VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 307 3.4E-19 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 Gene3D G3DSA:3.40.50.300 7 328 3.4E-93 T 15-10-2018 VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 SUPERFAMILY SSF52540 9 258 1.89E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 327 7.8E-20 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 Pfam PF00005 ABC transporter 34 185 6.2E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0961 90f61f3b74554950fe40df4b153a70de 328 SMART SM00382 43 236 2.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0142 8828e7676814b54dfedf4ee12198a831 1625 SUPERFAMILY SSF52540 1225 1412 2.88E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0142 8828e7676814b54dfedf4ee12198a831 1625 Pfam PF12458 ATPase involved in DNA repair 29 478 3.4E-156 T 15-10-2018 IPR020958 Domain of unknown function DUF3686 VIBNI_A0142 8828e7676814b54dfedf4ee12198a831 1625 SMART SM00382 1262 1411 2.7E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0142 8828e7676814b54dfedf4ee12198a831 1625 Pfam PF07728 AAA domain (dynein-related subfamily) 1266 1389 1.5E-6 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VIBNI_A0142 8828e7676814b54dfedf4ee12198a831 1625 Gene3D G3DSA:3.40.50.300 1258 1420 3.3E-13 T 15-10-2018 VIBNI_A0476 51caa347c03cccee1aedac916b691359 322 Gene3D G3DSA:1.10.10.60 3 54 6.5E-17 T 15-10-2018 VIBNI_A0476 51caa347c03cccee1aedac916b691359 322 Pfam PF04198 Putative sugar-binding domain 62 313 6.9E-73 T 15-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VIBNI_A0476 51caa347c03cccee1aedac916b691359 322 Gene3D G3DSA:3.40.50.1360 56 318 5.5E-79 T 15-10-2018 VIBNI_A0476 51caa347c03cccee1aedac916b691359 322 SUPERFAMILY SSF100950 65 313 1.34E-65 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A2846 d5608e8214314cdc9a1d98b9abf6b293 237 Pfam PF03749 Sugar fermentation stimulation protein 13 226 3.1E-77 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein VIBNI_A2846 d5608e8214314cdc9a1d98b9abf6b293 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 58.174 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein VIBNI_A2846 d5608e8214314cdc9a1d98b9abf6b293 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 228 5.1E-80 T 15-10-2018 IPR005224 Sugar fermentation stimulation protein VIBNI_A2846 d5608e8214314cdc9a1d98b9abf6b293 237 Gene3D G3DSA:2.40.50.580 1 80 2.2E-30 T 15-10-2018 VIBNI_A2846 d5608e8214314cdc9a1d98b9abf6b293 237 Gene3D G3DSA:3.40.1350.60 81 234 3.0E-57 T 15-10-2018 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 1512 1545 36.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 597 630 150.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 1002 1035 0.075 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 832 865 220.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 1070 1103 4.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SMART SM00028 866 899 32.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:1.25.40.10 1200 1377 3.2E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:1.25.40.10 736 942 9.9E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SUPERFAMILY SSF48452 1148 1551 1.59E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:1.25.40.10 1049 1191 1.9E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SUPERFAMILY SSF48452 774 995 5.69E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:3.90.70.10 314 450 9.2E-8 T 15-10-2018 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:1.25.40.10 949 1048 4.1E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Pfam PF12385 Papain-like cysteine protease AvrRpt2 308 426 1.5E-6 T 15-10-2018 IPR022118 Peptidase C70, AvrRpt2 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 Gene3D G3DSA:1.25.40.10 568 735 4.2E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SUPERFAMILY SSF48452 602 792 1.67E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1915 06b94601f2f39feee90fdb689c00a521 1657 SUPERFAMILY SSF48452 977 1178 3.79E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 Gene3D G3DSA:3.40.50.300 11 248 8.3E-53 T 15-10-2018 VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 Pfam PF00005 ABC transporter 31 177 3.6E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 SUPERFAMILY SSF52540 282 495 6.5E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 SMART SM00382 287 482 4.5E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 SMART SM00382 40 225 3.1E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 SUPERFAMILY SSF52540 15 239 2.66E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 Gene3D G3DSA:3.40.50.300 277 500 1.8E-37 T 15-10-2018 VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1500 af1fc317179eb23b725ee9b32b85452e 501 Pfam PF00005 ABC transporter 283 433 2.5E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1059 f0ae3f1aada2b97b1c483d0beb038f11 663 Gene3D G3DSA:1.10.287.950 334 663 5.5E-69 T 15-10-2018 VIBNI_A1059 f0ae3f1aada2b97b1c483d0beb038f11 663 SMART SM00283 401 662 4.9E-73 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1059 f0ae3f1aada2b97b1c483d0beb038f11 663 SUPERFAMILY SSF58104 354 663 4.97E-72 T 15-10-2018 VIBNI_A1059 f0ae3f1aada2b97b1c483d0beb038f11 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 629 1.2E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1059 f0ae3f1aada2b97b1c483d0beb038f11 663 SMART SM00304 334 386 3.6E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3709 971688ee512298cb01c3939bcae7a8cc 631 Pfam PF00884 Sulfatase 260 528 5.3E-27 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_A3709 971688ee512298cb01c3939bcae7a8cc 631 Gene3D G3DSA:3.40.720.10 252 530 1.3E-40 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A3709 971688ee512298cb01c3939bcae7a8cc 631 SUPERFAMILY SSF53649 257 562 7.56E-37 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A3687 256585a38bce22de4ce6bf359760e8e9 347 Pfam PF00534 Glycosyl transferases group 1 170 317 8.5E-12 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A3687 256585a38bce22de4ce6bf359760e8e9 347 Gene3D G3DSA:3.40.50.2000 3 173 7.3E-10 T 15-10-2018 VIBNI_A3687 256585a38bce22de4ce6bf359760e8e9 347 SUPERFAMILY SSF53756 5 320 6.09E-33 T 15-10-2018 VIBNI_A3687 256585a38bce22de4ce6bf359760e8e9 347 Gene3D G3DSA:3.40.50.2000 174 323 3.9E-19 T 15-10-2018 VIBNI_B0794 5b7390d8196abda2e87ba25ccccc0859 117 PIRSF PIRSF007028 1 117 1.0E-45 T 15-10-2018 IPR009874 Protein of unknown function DUF1428 VIBNI_B0794 5b7390d8196abda2e87ba25ccccc0859 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 3.7E-41 T 15-10-2018 IPR009874 Protein of unknown function DUF1428 VIBNI_B0794 5b7390d8196abda2e87ba25ccccc0859 117 Gene3D G3DSA:3.30.70.100 1 117 1.8E-42 T 15-10-2018 VIBNI_B0794 5b7390d8196abda2e87ba25ccccc0859 117 SUPERFAMILY SSF54909 1 115 1.55E-48 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 Gene3D G3DSA:3.20.20.70 2 316 4.2E-140 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.1E-155 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 SUPERFAMILY SSF51569 1 315 1.88E-115 T 15-10-2018 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 6.9E-102 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VIBNI_B1016 8093be29cae5ab73de3cf30b1c29e8a4 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.335 T 15-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VIBNI_B2134 ab820d8f54ea69fdbe0b4ea1febb461e 283 Gene3D G3DSA:3.20.20.150 1 281 4.6E-60 T 15-10-2018 VIBNI_B2134 ab820d8f54ea69fdbe0b4ea1febb461e 283 SUPERFAMILY SSF51658 3 257 2.62E-49 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_B2134 ab820d8f54ea69fdbe0b4ea1febb461e 283 Pfam PF01261 Xylose isomerase-like TIM barrel 38 210 5.8E-21 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A3757 be0f057d664f8c7dbd5bea3461cb8678 331 Gene3D G3DSA:3.40.50.1820 29 330 4.3E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3757 be0f057d664f8c7dbd5bea3461cb8678 331 SUPERFAMILY SSF53474 25 311 7.1E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3757 be0f057d664f8c7dbd5bea3461cb8678 331 Pfam PF12146 Serine aminopeptidase, S33 54 311 2.6E-57 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 VIBNI_A1550 914af30e713bebc2466bea48d6783345 105 Gene3D G3DSA:3.30.70.100 1 92 7.4E-29 T 15-10-2018 VIBNI_A1550 914af30e713bebc2466bea48d6783345 105 Pfam PF05336 L-rhamnose mutarotase 4 88 9.5E-24 T 15-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 VIBNI_A1550 914af30e713bebc2466bea48d6783345 105 SUPERFAMILY SSF54909 1 96 4.02E-28 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A1835 60365e90dcf445c21dc716adb3083e0d 159 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 150 9.5E-17 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 VIBNI_A2219 78317a18ffc299ab269a16f4d34ef77f 429 Pfam PF09335 SNARE associated Golgi protein 24 145 3.1E-15 T 15-10-2018 IPR032816 SNARE associated Golgi protein VIBNI_A2219 78317a18ffc299ab269a16f4d34ef77f 429 Pfam PF14067 LssY C-terminus 246 389 9.7E-37 T 15-10-2018 IPR025902 LssY-like C-terminal domain VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 Gene3D G3DSA:3.40.190.290 93 287 6.0E-12 T 15-10-2018 VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 Pfam PF03466 LysR substrate binding domain 91 280 2.6E-16 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 Gene3D G3DSA:1.10.10.10 1 88 1.4E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 SUPERFAMILY SSF46785 5 84 2.01E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.7E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3855 cf75b8f823590bb97b5069a3fe68323c 302 SUPERFAMILY SSF53850 91 291 1.07E-20 T 15-10-2018 VIBNI_A3142 e321a73c118f34997b96001fe8a3e614 194 Pfam PF09335 SNARE associated Golgi protein 42 149 9.5E-14 T 15-10-2018 IPR032816 SNARE associated Golgi protein VIBNI_B1682 aa9be56248a527d15317515fb003c231 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 124 9.5E-23 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_B1682 aa9be56248a527d15317515fb003c231 332 SUPERFAMILY SSF55347 150 298 1.57E-16 T 15-10-2018 VIBNI_B1682 aa9be56248a527d15317515fb003c231 332 Gene3D G3DSA:3.40.50.720 1 148 3.4E-38 T 15-10-2018 VIBNI_B1682 aa9be56248a527d15317515fb003c231 332 SUPERFAMILY SSF51735 5 141 1.54E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1682 aa9be56248a527d15317515fb003c231 332 Gene3D G3DSA:3.30.360.10 150 329 3.8E-24 T 15-10-2018 VIBNI_A2179 345f10476ae3dc2aa2606a92c0edf43c 254 Pfam PF06468 Spondin_N 74 193 5.7E-11 T 15-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VIBNI_A2179 345f10476ae3dc2aa2606a92c0edf43c 254 Gene3D G3DSA:2.60.40.2130 57 206 6.5E-15 T 15-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 SMART SM00382 375 557 2.5E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 SUPERFAMILY SSF90123 5 331 7.59E-55 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 SUPERFAMILY SSF52540 345 580 8.45E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 553 1.4E-177 T 15-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 Pfam PF00005 ABC transporter 368 511 1.2E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 Gene3D G3DSA:1.20.1560.10 2 334 1.8E-49 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 Pfam PF00664 ABC transporter transmembrane region 25 292 7.0E-41 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A1136 e0d165b8c01fbe60f4a89099c267e634 593 Gene3D G3DSA:3.40.50.300 344 592 3.4E-69 T 15-10-2018 VIBNI_A0505 572bb3289c64a3afbc2434d215866dc9 294 Pfam PF12710 haloacid dehalogenase-like hydrolase 39 231 1.9E-17 T 15-10-2018 VIBNI_A0505 572bb3289c64a3afbc2434d215866dc9 294 Gene3D G3DSA:3.40.50.1000 96 264 1.8E-26 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A0505 572bb3289c64a3afbc2434d215866dc9 294 SUPERFAMILY SSF56784 35 234 6.59E-18 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 SUPERFAMILY SSF55785 13 131 6.63E-11 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 Gene3D G3DSA:3.30.70.270 149 317 5.2E-56 T 15-10-2018 VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 313 5.6E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 Gene3D G3DSA:3.30.450.20 10 142 5.7E-32 T 15-10-2018 VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 316 1.5E-53 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 SUPERFAMILY SSF55073 161 316 3.84E-47 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 SMART SM00091 12 78 0.0011 T 15-10-2018 IPR000014 PAS domain VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 140 1.3E-6 T 15-10-2018 IPR000014 PAS domain VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 Pfam PF00989 PAS fold 17 135 2.7E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 VIBNI_A1662 8c505f65cd206178fafbf0e0de9295a3 318 SMART SM00267 145 317 3.4E-59 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 271 361 1.0E-17 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 Gene3D G3DSA:3.20.20.70 12 382 1.2E-114 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 15 379 2.0E-144 T 15-10-2018 VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 SUPERFAMILY SSF102114 11 341 6.28E-49 T 15-10-2018 VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 Pfam PF04055 Radical SAM superfamily 21 190 1.1E-14 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 Pfam PF13186 Iron-sulfur cluster-binding domain 271 332 7.9E-7 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain VIBNI_B0703 c8288720b6145cea8e0e0b227cc352e0 400 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 172 395 8.0E-13 T 15-10-2018 VIBNI_A1437 a09b35c33ebe17cccc9f2d28d6d70b49 501 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 495 8.0E-155 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_A1437 a09b35c33ebe17cccc9f2d28d6d70b49 501 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 54 495 6.4E-130 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_A1705 c3f8639b487bb339c150573ca3d4c87e 165 Gene3D G3DSA:3.40.50.300 1 165 2.0E-15 T 15-10-2018 VIBNI_A1705 c3f8639b487bb339c150573ca3d4c87e 165 SUPERFAMILY SSF52540 2 163 6.61E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 Gene3D G3DSA:1.10.10.10 1 84 8.0E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 Pfam PF03466 LysR substrate binding domain 88 279 7.0E-24 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 SUPERFAMILY SSF53850 86 282 4.44E-27 T 15-10-2018 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-6 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 SUPERFAMILY SSF46785 1 84 1.09E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 Gene3D G3DSA:3.40.190.10 161 263 9.4E-45 T 15-10-2018 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 7.6E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0518 2da3c0a409dd7444fcbe8286a4ae583e 315 Gene3D G3DSA:3.40.190.10 91 292 9.4E-45 T 15-10-2018 VIBNI_A2059 8e1f6c2c2c5f647679e48dde5be2a550 170 PIRSF PIRSF028103 1 169 5.9E-38 T 15-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VIBNI_A2059 8e1f6c2c2c5f647679e48dde5be2a550 170 Pfam PF13740 ACT domain 4 67 2.5E-8 T 15-10-2018 VIBNI_A2059 8e1f6c2c2c5f647679e48dde5be2a550 170 Gene3D G3DSA:3.30.70.260 86 169 1.2E-11 T 15-10-2018 VIBNI_A2059 8e1f6c2c2c5f647679e48dde5be2a550 170 SUPERFAMILY SSF55021 88 166 1.96E-10 T 15-10-2018 VIBNI_A3429 9a68f320de5d5b2e5ef3552544bf8b27 432 SUPERFAMILY SSF52540 65 366 4.75E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3429 9a68f320de5d5b2e5ef3552544bf8b27 432 Gene3D G3DSA:3.40.50.300 180 430 1.3E-74 T 15-10-2018 VIBNI_A3429 9a68f320de5d5b2e5ef3552544bf8b27 432 Gene3D G3DSA:3.30.450.380 9 177 8.9E-41 T 15-10-2018 VIBNI_A3429 9a68f320de5d5b2e5ef3552544bf8b27 432 Pfam PF00437 Type II/IV secretion system protein 84 359 1.7E-84 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SUPERFAMILY SSF55785 312 418 4.54E-25 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SUPERFAMILY SSF47384 423 504 1.86E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Gene3D G3DSA:3.40.50.2300 680 801 3.1E-33 T 15-10-2018 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SMART SM00091 303 370 2.0E-7 T 15-10-2018 IPR000014 PAS domain VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SMART SM00448 684 798 6.4E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SUPERFAMILY SSF55874 492 660 4.32E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Gene3D G3DSA:3.30.565.10 502 665 1.2E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SMART SM00387 550 664 5.0E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SUPERFAMILY SSF52172 683 802 1.1E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 550 660 7.4E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SMART SM00086 376 418 2.0E-7 T 15-10-2018 IPR001610 PAC motif VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Pfam PF00512 His Kinase A (phospho-acceptor) domain 438 503 1.0E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Gene3D G3DSA:1.10.287.130 414 501 1.9E-27 T 15-10-2018 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 SMART SM00388 438 503 1.2E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 8.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 8.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 8.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 8.6E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Pfam PF00072 Response regulator receiver domain 686 798 1.1E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Pfam PF13426 PAS domain 314 417 1.9E-19 T 15-10-2018 IPR000014 PAS domain VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 Gene3D G3DSA:3.30.450.20 292 413 5.1E-31 T 15-10-2018 VIBNI_B0869 1db1ab802d938475e8d6068e2db0360d 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 424 2.0E-18 T 15-10-2018 IPR000014 PAS domain VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 SUPERFAMILY SSF117892 49 183 2.75E-41 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 PRINTS PR00721 Stomatin signature 128 151 2.5E-29 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 PRINTS PR00721 Stomatin signature 152 170 2.5E-29 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 PRINTS PR00721 Stomatin signature 108 125 2.5E-29 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 PRINTS PR00721 Stomatin signature 73 94 2.5E-29 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 PRINTS PR00721 Stomatin signature 171 192 2.5E-29 T 15-10-2018 IPR001972 Stomatin family GO:0016020 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 15-10-2018 IPR018080 Band 7/stomatin-like, conserved site VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 Gene3D G3DSA:3.30.479.30 46 178 1.8E-44 T 15-10-2018 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 Pfam PF01145 SPFH domain / Band 7 family 22 191 2.8E-30 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 Pfam PF16200 C-terminal region of band_7 237 297 5.5E-7 T 15-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VIBNI_A2614 d973a6121ef48e5207d0cca85fed3d05 301 SMART SM00244 18 176 5.7E-61 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 Pfam PF02311 AraC-like ligand binding domain 14 134 9.3E-21 T 15-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 SMART SM00342 182 264 4.4E-26 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 Gene3D G3DSA:1.10.10.60 163 266 1.1E-26 T 15-10-2018 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 Pfam PF12833 Helix-turn-helix domain 188 262 5.5E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 SUPERFAMILY SSF46689 167 216 2.82E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 SUPERFAMILY SSF46689 218 263 3.32E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A3801 0703bb730b600fef31c947929421f58e 266 SUPERFAMILY SSF51215 24 137 1.57E-15 T 15-10-2018 IPR037923 Transcription regulator HTH-like VIBNI_A2896 2f1e87863d881ee3eac3d0b7b7d38d36 174 Pfam PF01569 PAP2 superfamily 68 169 2.1E-19 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_A2896 2f1e87863d881ee3eac3d0b7b7d38d36 174 SUPERFAMILY SSF48317 6 169 5.1E-38 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VIBNI_A2896 2f1e87863d881ee3eac3d0b7b7d38d36 174 SMART SM00014 64 170 2.9E-15 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VIBNI_A2896 2f1e87863d881ee3eac3d0b7b7d38d36 174 Gene3D G3DSA:1.20.144.10 89 174 1.0E-19 T 15-10-2018 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 SUPERFAMILY SSF75620 2 302 8.11E-125 T 15-10-2018 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Gene3D G3DSA:1.20.58.410 1 54 4.5E-12 T 15-10-2018 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 303 32.617 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Gene3D G3DSA:3.30.70.1660 68 296 1.2E-96 T 15-10-2018 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 SMART SM00937 23 133 3.0E-53 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 301 4.1E-149 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Gene3D G3DSA:3.30.160.20 164 259 1.2E-96 T 15-10-2018 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Pfam PF00472 RF-1 domain 167 275 2.4E-40 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 183 199 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A0320 d22f77f72443a8cb77964f4c6870dbb0 303 Pfam PF03462 PCRF domain 1 157 4.7E-49 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 Pfam PF00196 Bacterial regulatory proteins, luxR family 329 381 5.3E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 329 343 7.5E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 343 359 7.5E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 359 371 7.5E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 SMART SM00421 326 383 3.8E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 Gene3D G3DSA:1.10.10.10 312 386 2.6E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3545 68f7eb1963d6471542925a18a4da2c56 392 SUPERFAMILY SSF46894 318 384 1.67E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.316 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 4.9E-137 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 SUPERFAMILY SSF52096 25 282 2.45E-84 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 Pfam PF01039 Carboxyl transferase domain 99 240 2.5E-13 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.3E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.3E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.3E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.3E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.3E-38 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VIBNI_A0805 b6a6eb745aca75fa5d42763b49139124 308 Gene3D G3DSA:3.90.226.10 25 286 2.0E-81 T 15-10-2018 VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 Pfam PF07729 FCD domain 110 230 9.9E-22 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 SUPERFAMILY SSF46785 12 84 3.41E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 SUPERFAMILY SSF48008 106 233 1.15E-22 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 SMART SM00345 21 80 3.2E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 SMART SM00895 109 231 1.1E-16 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 76 1.4E-14 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 Gene3D G3DSA:1.10.10.10 11 84 6.0E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 Gene3D G3DSA:1.20.120.530 105 242 2.6E-25 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2751 a8a47bb28916c0fb4738ddfdae0ae270 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.8E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 Gene3D G3DSA:2.40.50.100 239 345 4.3E-15 T 15-10-2018 VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 Gene3D G3DSA:3.40.50.300 1 238 8.7E-75 T 15-10-2018 VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 Pfam PF00005 ABC transporter 20 161 1.5E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 SUPERFAMILY SSF52540 4 242 4.89E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 SUPERFAMILY SSF50331 236 348 9.48E-21 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 SMART SM00382 28 211 3.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0228 e9ccd537e098dc81ba52cc3a8cb198ad 356 Gene3D G3DSA:2.40.50.140 274 333 4.3E-15 T 15-10-2018 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 SUPERFAMILY SSF51246 317 389 7.38E-18 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Gene3D G3DSA:3.30.1490.20 121 194 4.6E-32 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 SUPERFAMILY SSF56059 111 313 2.3E-57 T 15-10-2018 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Gene3D G3DSA:3.30.470.20 195 389 6.5E-62 T 15-10-2018 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 6.9E-190 T 15-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Pfam PF02222 ATP-grasp domain 121 293 2.4E-58 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.169 T 15-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Gene3D G3DSA:3.40.50.20 1 120 2.4E-54 T 15-10-2018 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 7.5E-5 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A1414 033307c0b191f22c5f674a0b3673b429 391 SUPERFAMILY SSF52440 2 110 1.73E-35 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A3338 d14b1f63c4a19dcff926c4231992184d 141 SUPERFAMILY SSF55729 12 116 1.1E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3338 d14b1f63c4a19dcff926c4231992184d 141 Pfam PF13508 Acetyltransferase (GNAT) domain 47 109 3.6E-9 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3338 d14b1f63c4a19dcff926c4231992184d 141 Gene3D G3DSA:3.40.630.30 17 119 9.9E-11 T 15-10-2018 VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 PIRSF PIRSF000858 4 507 2.4E-166 T 15-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 SUPERFAMILY SSF100950 284 502 4.51E-58 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 Gene3D G3DSA:3.40.1080.10 2 268 1.8E-91 T 15-10-2018 VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 Gene3D G3DSA:3.40.1080.10 280 507 5.0E-79 T 15-10-2018 VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 Pfam PF01144 Coenzyme A transferase 16 246 2.8E-20 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 SUPERFAMILY SSF100950 6 263 2.84E-72 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B0422 e12e661a67605e60de1ca64ece7ac16b 508 SMART SM00882 9 247 1.4E-38 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_A1160 316782341fd74cf25dffce93cc29cfe9 123 Gene3D G3DSA:1.10.1200.10 1 123 4.3E-15 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A1160 316782341fd74cf25dffce93cc29cfe9 123 Pfam PF00550 Phosphopantetheine attachment site 5 59 2.5E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A1160 316782341fd74cf25dffce93cc29cfe9 123 SUPERFAMILY SSF47336 2 59 6.15E-12 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 SMART SM00267 339 512 3.4E-51 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 505 1.5E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 SUPERFAMILY SSF141868 527 775 4.71E-79 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 SUPERFAMILY SSF55073 355 514 2.51E-44 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 SMART SM00052 522 770 6.9E-96 T 15-10-2018 IPR001633 EAL domain VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 Pfam PF03924 CHASE domain 83 252 2.8E-8 T 15-10-2018 IPR006189 CHASE domain VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 Gene3D G3DSA:3.30.70.270 344 524 3.1E-55 T 15-10-2018 VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 Gene3D G3DSA:3.20.20.450 525 778 2.3E-88 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 Pfam PF00563 EAL domain 528 765 4.4E-69 T 15-10-2018 IPR001633 EAL domain VIBNI_B1343 d1e28dad52dd0fb8a67c45285edb5fa5 800 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 510 3.2E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0321 da31009b6b44c5df5aaecc457894a90a 404 Pfam PF12708 Pectate lyase superfamily protein 74 270 6.7E-7 T 15-10-2018 IPR024535 Pectate lyase superfamily protein VIBNI_B0321 da31009b6b44c5df5aaecc457894a90a 404 SUPERFAMILY SSF51126 69 389 1.18E-11 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor VIBNI_A1889 5385b7e52edd6dc153ff40128ea2e2ba 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VIBNI_A1889 5385b7e52edd6dc153ff40128ea2e2ba 416 SUPERFAMILY SSF103473 10 400 6.8E-36 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A1889 5385b7e52edd6dc153ff40128ea2e2ba 416 Gene3D G3DSA:1.20.1250.20 10 401 5.5E-32 T 15-10-2018 VIBNI_A1889 5385b7e52edd6dc153ff40128ea2e2ba 416 Pfam PF07690 Major Facilitator Superfamily 16 369 2.7E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0752 792c677a08cbd81309e04ca051e3b33e 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 329 1.0E-42 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2605 f8b13d56fe686e6ddc68ede9a120e070 92 SUPERFAMILY SSF52833 5 87 1.92E-29 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A2605 f8b13d56fe686e6ddc68ede9a120e070 92 Gene3D G3DSA:3.40.30.10 1 92 4.6E-40 T 15-10-2018 VIBNI_A2605 f8b13d56fe686e6ddc68ede9a120e070 92 Pfam PF10262 Rdx family 6 78 1.3E-31 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type VIBNI_A2605 f8b13d56fe686e6ddc68ede9a120e070 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 7.7E-25 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 SUPERFAMILY SSF51735 419 562 3.35E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 3.8E-72 T 15-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 3.4E-59 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 Gene3D G3DSA:3.40.50.720 419 577 1.6E-32 T 15-10-2018 VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 Gene3D G3DSA:1.20.1530.20 2 399 7.5E-78 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_B0394 8ea6221d2927db3dfae6cc143c3184cc 639 Pfam PF02254 TrkA-N domain 422 534 3.3E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.5E-27 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 Gene3D G3DSA:3.30.1340.10 1 85 6.7E-32 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 SUPERFAMILY SSF55594 1 82 1.16E-26 T 15-10-2018 IPR035895 HPr-like superfamily VIBNI_A2627 647d6c7149049f33f122819643fd6729 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.5E-28 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like VIBNI_B1377 d7bfe33a51a77e7373f6d816eb8b32b3 337 PIRSF PIRSF005096 1 336 6.7E-105 T 15-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VIBNI_B1377 d7bfe33a51a77e7373f6d816eb8b32b3 337 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 10 334 6.3E-124 T 15-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VIBNI_B1377 d7bfe33a51a77e7373f6d816eb8b32b3 337 Gene3D G3DSA:2.70.98.10 4 335 2.7E-103 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_B1377 d7bfe33a51a77e7373f6d816eb8b32b3 337 Pfam PF01263 Aldose 1-epimerase 14 331 4.1E-78 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VIBNI_B1377 d7bfe33a51a77e7373f6d816eb8b32b3 337 SUPERFAMILY SSF74650 3 334 3.83E-97 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_A0706 8e7efa521a517caaef631a1bf5168e1c 285 SUPERFAMILY SSF56281 64 271 1.14E-26 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A0706 8e7efa521a517caaef631a1bf5168e1c 285 Gene3D G3DSA:3.60.15.10 30 285 6.0E-59 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A0706 8e7efa521a517caaef631a1bf5168e1c 285 Pfam PF00753 Metallo-beta-lactamase superfamily 66 237 3.5E-14 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0706 8e7efa521a517caaef631a1bf5168e1c 285 SMART SM00849 64 269 8.7E-15 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A1952 694094ef0186427e64c6878843b7a989 176 Pfam PF00929 Exonuclease 7 171 9.7E-12 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A1952 694094ef0186427e64c6878843b7a989 176 SMART SM00479 5 176 9.9E-5 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A1952 694094ef0186427e64c6878843b7a989 176 Gene3D G3DSA:3.30.420.10 1 176 5.8E-37 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1952 694094ef0186427e64c6878843b7a989 176 SUPERFAMILY SSF53098 4 175 4.64E-29 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 SUPERFAMILY SSF51735 1 146 1.27E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 Gene3D G3DSA:3.30.360.10 134 350 4.4E-148 T 15-10-2018 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 Gene3D G3DSA:3.40.50.720 3 356 4.4E-148 T 15-10-2018 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 15-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.0E-57 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 SMART SM00859 2 121 1.9E-22 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.8E-22 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 1.1E-188 T 15-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.965 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 PIRSF PIRSF000148 1 370 8.6E-68 T 15-10-2018 VIBNI_A0884 ec6f56deefe9439e346c2c1297a2b007 370 SUPERFAMILY SSF55347 133 354 7.07E-79 T 15-10-2018 VIBNI_B0385 1b3e7ecdca13585a8e832c5c5e89d78b 136 SUPERFAMILY SSF51316 1 132 5.96E-43 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B0385 1b3e7ecdca13585a8e832c5c5e89d78b 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 111 1.5E-19 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_B0385 1b3e7ecdca13585a8e832c5c5e89d78b 136 Gene3D G3DSA:2.170.150.70 2 118 2.0E-18 T 15-10-2018 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 Pfam PF13602 Zinc-binding dehydrogenase 187 307 1.2E-28 T 15-10-2018 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 SMART SM00829 10 307 3.5E-29 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 Gene3D G3DSA:3.90.180.10 8 306 8.7E-97 T 15-10-2018 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 SUPERFAMILY SSF50129 1 150 2.13E-38 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 15-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 95 5.5E-11 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 SUPERFAMILY SSF51735 119 278 5.02E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1990 efa43a91eb1cf9526dba9cf1c390efce 311 Gene3D G3DSA:3.40.50.720 128 258 8.7E-97 T 15-10-2018 VIBNI_A3146 80e708ee3c3aad80ddcbbbb615212208 150 Pfam PF04945 YHS domain 52 87 1.3E-11 T 15-10-2018 IPR007029 YHS domain VIBNI_A1200 4e02cf1fe8fe41f12ae993c4d8d0cee4 252 Gene3D G3DSA:3.40.50.1360 7 243 1.5E-65 T 15-10-2018 VIBNI_A1200 4e02cf1fe8fe41f12ae993c4d8d0cee4 252 SUPERFAMILY SSF100950 1 245 1.32E-55 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A1200 4e02cf1fe8fe41f12ae993c4d8d0cee4 252 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 233 4.0E-19 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VIBNI_A1140 45b9b89e19a4c83c122a1280a6bc92ec 410 Gene3D G3DSA:3.90.1150.10 25 404 1.3E-135 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1140 45b9b89e19a4c83c122a1280a6bc92ec 410 SUPERFAMILY SSF53383 4 408 6.32E-95 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1140 45b9b89e19a4c83c122a1280a6bc92ec 410 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 4.9E-164 T 15-10-2018 IPR011340 Cysteine desulfurase-related VIBNI_A1140 45b9b89e19a4c83c122a1280a6bc92ec 410 Pfam PF00266 Aminotransferase class-V 26 400 2.5E-70 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A1140 45b9b89e19a4c83c122a1280a6bc92ec 410 Gene3D G3DSA:3.40.640.10 33 289 1.3E-135 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 41.659 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 Pfam PF00557 Metallopeptidase family M24 12 271 1.2E-49 T 15-10-2018 IPR000994 Peptidase M24 VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 Gene3D G3DSA:3.90.230.10 1 290 4.1E-105 T 15-10-2018 VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 1.6E-85 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 SUPERFAMILY SSF55920 3 282 5.5E-86 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like VIBNI_A2505 8d66ef021db5443be76ced6aae7925b9 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0216 a59dfa3a2cf7406716b0afd7885b9076 237 Gene3D G3DSA:1.10.10.10 6 77 7.6E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0216 a59dfa3a2cf7406716b0afd7885b9076 237 SUPERFAMILY SSF55781 95 187 1.83E-7 T 15-10-2018 VIBNI_B0216 a59dfa3a2cf7406716b0afd7885b9076 237 SUPERFAMILY SSF46785 7 75 1.07E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0216 a59dfa3a2cf7406716b0afd7885b9076 237 Gene3D G3DSA:3.30.450.40 91 234 2.3E-7 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0826 11de7c99377da4d76a4fe25ea83fda26 312 Gene3D G3DSA:1.10.8.760 150 214 3.2E-26 T 15-10-2018 VIBNI_A0826 11de7c99377da4d76a4fe25ea83fda26 312 SUPERFAMILY SSF159501 36 267 7.46E-70 T 15-10-2018 VIBNI_A0826 11de7c99377da4d76a4fe25ea83fda26 312 PIRSF PIRSF020419 3 294 9.6E-64 T 15-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VIBNI_A0826 11de7c99377da4d76a4fe25ea83fda26 312 Gene3D G3DSA:3.40.50.11550 42 263 3.2E-26 T 15-10-2018 VIBNI_A0826 11de7c99377da4d76a4fe25ea83fda26 312 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 48 250 3.2E-56 T 15-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 Pfam PF00850 Histone deacetylase domain 42 328 3.2E-79 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 1.3E-13 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 1.3E-13 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 1.3E-13 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 SUPERFAMILY SSF52768 2 358 1.73E-99 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily VIBNI_A0434 a11dae7d2b342d128d489a69bc3cd21a 374 Gene3D G3DSA:3.40.800.20 2 374 1.5E-139 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_B2115 b7d4ab3ea77611b481155a325a53883f 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 3.5E-51 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_B2115 b7d4ab3ea77611b481155a325a53883f 147 Gene3D G3DSA:2.170.150.20 5 147 3.6E-54 T 15-10-2018 VIBNI_B2115 b7d4ab3ea77611b481155a325a53883f 147 SUPERFAMILY SSF51316 23 144 1.36E-53 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B2115 b7d4ab3ea77611b481155a325a53883f 147 Pfam PF01641 SelR domain 28 144 4.9E-48 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Gene3D G3DSA:3.30.565.10 2 215 3.1E-76 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.1E-26 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.8E-58 T 15-10-2018 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Pfam PF00204 DNA gyrase B 218 384 1.2E-41 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 SUPERFAMILY SSF54211 217 382 3.41E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.561 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Gene3D G3DSA:3.30.230.10 216 389 3.2E-57 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Pfam PF01751 Toprim domain 413 521 8.2E-12 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Gene3D G3DSA:3.40.50.670 390 621 7.0E-93 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 SUPERFAMILY SSF56719 388 619 6.8E-80 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 3.9E-122 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 SMART SM00433 34 622 3.1E-217 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 SUPERFAMILY SSF55874 4 215 1.92E-66 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 170 1.7E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0201 de95a1eb329d3e27578b8290cbcf5709 626 SMART SM00387 27 173 4.8E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1678 8993c947effae8b2931a580df8d6589b 344 Pfam PF01757 Acyltransferase family 6 311 1.7E-33 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 Pfam PF01274 Malate synthase 22 534 4.7E-187 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 SUPERFAMILY SSF51645 22 535 8.89E-176 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 Gene3D G3DSA:1.20.1220.12 417 536 4.1E-44 T 15-10-2018 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 PIRSF PIRSF001363 5 536 3.1E-233 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 Gene3D G3DSA:3.20.20.360 6 415 2.4E-172 T 15-10-2018 VIBNI_B1440 e1582d95598a88e42ea5d616800cfd53 536 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 27 535 7.1E-221 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 634 817 1.6E-46 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Pfam PF05227 CHASE3 domain 348 489 2.4E-39 T 15-10-2018 IPR007891 CHASE3 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Pfam PF05227 CHASE3 domain 30 168 3.1E-41 T 15-10-2018 IPR007891 CHASE3 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Pfam PF05227 CHASE3 domain 188 329 2.5E-35 T 15-10-2018 IPR007891 CHASE3 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Gene3D G3DSA:1.10.287.950 521 852 2.2E-75 T 15-10-2018 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 SMART SM00283 589 850 7.0E-80 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 716 745 1.0E-20 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 687 714 1.0E-20 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 610 639 1.0E-20 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 SUPERFAMILY SSF58104 542 851 9.81E-75 T 15-10-2018 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Gene3D G3DSA:1.20.1440.210 34 166 4.4E-42 T 15-10-2018 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Gene3D G3DSA:1.20.1440.210 355 487 5.1E-36 T 15-10-2018 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Gene3D G3DSA:1.20.1440.210 194 327 4.1E-36 T 15-10-2018 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 Pfam PF00672 HAMP domain 522 566 3.4E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1304 b26f60daef8fbc3a70862cb05bde5a01 853 SMART SM00304 522 574 4.5E-12 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1219 69c50eb4cdf144a21c198355754267f1 382 SUPERFAMILY SSF55469 150 381 1.19E-6 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B1219 69c50eb4cdf144a21c198355754267f1 382 Pfam PF00881 Nitroreductase family 158 365 8.6E-6 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VIBNI_B1219 69c50eb4cdf144a21c198355754267f1 382 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 26 1.5E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_B1219 69c50eb4cdf144a21c198355754267f1 382 Gene3D G3DSA:3.40.109.10 37 136 1.2E-22 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_B1219 69c50eb4cdf144a21c198355754267f1 382 Gene3D G3DSA:3.40.109.10 148 382 4.7E-31 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A3752 a4f60d91893723c2c7ffd8076bd4838b 162 SUPERFAMILY SSF52799 13 160 9.11E-32 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like VIBNI_A3752 a4f60d91893723c2c7ffd8076bd4838b 162 Pfam PF00782 Dual specificity phosphatase, catalytic domain 32 146 3.5E-8 T 15-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VIBNI_A3752 a4f60d91893723c2c7ffd8076bd4838b 162 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 15-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VIBNI_A3752 a4f60d91893723c2c7ffd8076bd4838b 162 Gene3D G3DSA:3.90.190.10 6 162 1.5E-30 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like VIBNI_A2629 eef3d0225d52de689896db6660b7fece 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.1E-49 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VIBNI_A2629 eef3d0225d52de689896db6660b7fece 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.4E-50 T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VIBNI_A2629 eef3d0225d52de689896db6660b7fece 169 SUPERFAMILY SSF51261 18 166 1.27E-55 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2629 eef3d0225d52de689896db6660b7fece 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 15-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VIBNI_A2629 eef3d0225d52de689896db6660b7fece 169 Gene3D G3DSA:2.70.70.10 9 169 2.0E-61 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2197 3a5e70e97d4eb5b356ade552f63a89f6 271 SUPERFAMILY SSF52540 19 231 2.32E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2197 3a5e70e97d4eb5b356ade552f63a89f6 271 SMART SM00382 34 217 4.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2197 3a5e70e97d4eb5b356ade552f63a89f6 271 Gene3D G3DSA:3.40.50.300 5 253 7.4E-64 T 15-10-2018 VIBNI_A2197 3a5e70e97d4eb5b356ade552f63a89f6 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A2197 3a5e70e97d4eb5b356ade552f63a89f6 271 Pfam PF00005 ABC transporter 27 172 5.4E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 Gene3D G3DSA:3.30.300.30 149 244 1.1E-7 T 15-10-2018 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 Pfam PF01514 Secretory protein of YscJ/FliF family 59 246 7.7E-53 T 15-10-2018 IPR006182 Secretory protein YscJ/FliF VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PIRSF PIRSF004862 25 578 5.0E-150 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PRINTS PR01009 Flagellar M-ring protein signature 179 193 5.6E-22 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PRINTS PR01009 Flagellar M-ring protein signature 222 240 5.6E-22 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PRINTS PR01009 Flagellar M-ring protein signature 292 310 5.6E-22 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PRINTS PR01009 Flagellar M-ring protein signature 372 396 5.6E-22 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 PRINTS PR01009 Flagellar M-ring protein signature 147 165 5.6E-22 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 Pfam PF08345 Flagellar M-ring protein C-terminal 279 449 6.7E-38 T 15-10-2018 IPR013556 Flagellar M-ring C-terminal VIBNI_A0723 5d8456b273ac7b821cdb09619d079c76 578 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 51 576 1.8E-69 T 15-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 Gene3D G3DSA:1.10.3880.10 1 90 6.0E-38 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-37 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.959 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.5E-41 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 SUPERFAMILY SSF111148 1 89 5.49E-40 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VIBNI_A0045 95f0182f743d6c100b3b3705697c2551 90 PIRSF PIRSF029827 1 90 1.9E-42 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 SUPERFAMILY SSF46785 1 79 4.99E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 Gene3D G3DSA:1.10.10.10 1 88 1.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 SUPERFAMILY SSF53850 91 273 1.99E-26 T 15-10-2018 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 Pfam PF03466 LysR substrate binding domain 91 274 2.6E-25 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.6E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 Gene3D G3DSA:3.40.190.10 91 265 4.3E-22 T 15-10-2018 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.8E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3749 1423055a5a25409c6b4c3794d59ea2f2 276 Gene3D G3DSA:3.40.190.10 152 251 4.3E-22 T 15-10-2018 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 SMART SM00354 15 85 2.1E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 SUPERFAMILY SSF53822 75 344 2.17E-87 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 Pfam PF13377 Periplasmic binding protein-like domain 185 343 1.3E-40 T 15-10-2018 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 Gene3D G3DSA:1.10.260.40 8 68 2.6E-21 T 15-10-2018 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 SUPERFAMILY SSF47413 15 73 2.44E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 Gene3D G3DSA:3.40.50.2300 175 304 4.9E-84 T 15-10-2018 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 Gene3D G3DSA:3.40.50.2300 69 321 4.9E-84 T 15-10-2018 VIBNI_A0793 0b49b050b125b7690e3d5c24a69efae5 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 6.6E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 SMART SM00421 151 208 4.8E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 SUPERFAMILY SSF55785 8 113 2.62E-9 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 208 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 Pfam PF08448 PAS fold 11 118 2.9E-18 T 15-10-2018 IPR013656 PAS fold-4 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 Gene3D G3DSA:3.30.450.20 3 122 3.7E-11 T 15-10-2018 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.2E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 SUPERFAMILY SSF46894 147 213 7.82E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B0030 b20efc585a8ca6d95dd4b6a717ef5392 234 Gene3D G3DSA:1.10.10.10 149 213 7.0E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 SUPERFAMILY SSF141868 640 890 2.75E-86 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 466 622 2.5E-23 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 SUPERFAMILY SSF55785 329 456 7.23E-12 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Gene3D G3DSA:3.30.450.20 328 463 4.6E-13 T 15-10-2018 VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 SUPERFAMILY SSF55073 474 627 4.16E-33 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 SMART SM00052 635 881 1.1E-104 T 15-10-2018 IPR001633 EAL domain VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Gene3D G3DSA:3.30.70.270 464 637 4.7E-39 T 15-10-2018 VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Gene3D G3DSA:3.30.450.20 75 158 2.0E-6 T 15-10-2018 VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Gene3D G3DSA:3.20.20.450 638 891 1.9E-96 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 464 7.1E-8 T 15-10-2018 IPR000014 PAS domain VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Pfam PF00563 EAL domain 641 876 6.4E-74 T 15-10-2018 IPR001633 EAL domain VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 618 5.4E-30 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2120 89105105cd812e010ae1c2ff2d338804 899 SMART SM00267 458 624 1.2E-31 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3140 b6b4e096f025fbda8e64e3ca6bcdabef 152 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 4.2E-16 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3140 b6b4e096f025fbda8e64e3ca6bcdabef 152 SUPERFAMILY SSF55729 1 150 5.14E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3140 b6b4e096f025fbda8e64e3ca6bcdabef 152 Gene3D G3DSA:3.40.630.30 1 150 2.2E-39 T 15-10-2018 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 Gene3D G3DSA:3.30.499.10 327 467 2.9E-49 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.999 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 1.1E-266 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 Gene3D G3DSA:3.30.499.20 4 286 1.4E-98 T 15-10-2018 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.1E-160 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 108 116 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 286 300 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 119 132 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 82 95 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 133 148 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 209 222 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 399 412 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 195 208 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 PRINTS PR00415 Aconitase family signature 343 354 3.0E-50 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VIBNI_A2910 6df2fc35a9e1e9527c5a5db40704c581 467 SUPERFAMILY SSF53732 1 466 4.84E-165 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VIBNI_B1651 e526f4d6ab1b9c818a4020c9015893b6 279 Pfam PF02104 SURF1 family 39 255 2.0E-27 T 15-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 SMART SM00563 455 569 3.9E-32 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 Pfam PF07690 Major Facilitator Superfamily 18 381 3.1E-22 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 Gene3D G3DSA:1.20.1250.20 8 421 1.8E-30 T 15-10-2018 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 SUPERFAMILY SSF69593 404 614 7.59E-30 T 15-10-2018 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 Pfam PF01553 Acyltransferase 441 566 3.6E-23 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_A2409 fce34f7d3c2ea935e118b0718c228ae3 624 SUPERFAMILY SSF103473 6 423 5.1E-32 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A2624 dfa9ff640766dece61d24e571beb425a 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 6.9E-42 T 15-10-2018 VIBNI_A2624 dfa9ff640766dece61d24e571beb425a 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.827 T 15-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 SMART SM00963 103 183 2.6E-25 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 SUPERFAMILY SSF47364 98 177 2.09E-22 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 126 399 64.336 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 126 398 1.4E-114 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 SMART SM00382 197 377 3.2E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 Gene3D G3DSA:1.20.120.140 100 397 9.6E-117 T 15-10-2018 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 SMART SM00962 198 399 3.5E-123 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 Pfam PF02881 SRP54-type protein, helical bundle domain 118 179 4.4E-13 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 SUPERFAMILY SSF52540 194 399 5.11E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 Pfam PF00448 SRP54-type protein, GTPase domain 199 398 1.3E-77 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 Gene3D G3DSA:3.40.50.300 194 387 9.6E-117 T 15-10-2018 VIBNI_A3739 fb360f728595ce11675b3f2706e3b8d2 402 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 372 385 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 SMART SM00388 476 544 0.0058 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 SMART SM00387 589 697 6.6E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 Gene3D G3DSA:1.10.287.130 432 541 1.5E-11 T 15-10-2018 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 Gene3D G3DSA:1.10.3430.10 1 414 1.8E-111 T 15-10-2018 IPR029020 Ammonium/urea transporter VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 SUPERFAMILY SSF47384 465 541 4.12E-9 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 683 3.1E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 ProSitePatterns PS01219 Ammonium transporters signature. 154 179 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 Pfam PF00909 Ammonium Transporter Family 6 393 1.9E-94 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 SUPERFAMILY SSF55874 557 695 2.1E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 Gene3D G3DSA:3.30.565.10 553 700 8.0E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 4.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 657 4.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 643 4.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B1040 7de874c3b042322ad66a8654a92f9bd6 703 SUPERFAMILY SSF111352 5 377 8.24E-85 T 15-10-2018 VIBNI_A2012 cdea5280c6ecd63d2c54bd0a3b6b14cd 241 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 46 231 9.7E-22 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VIBNI_A2012 cdea5280c6ecd63d2c54bd0a3b6b14cd 241 Gene3D G3DSA:3.30.420.10 46 231 5.2E-37 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2012 cdea5280c6ecd63d2c54bd0a3b6b14cd 241 SMART SM00479 50 231 8.8E-26 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A2012 cdea5280c6ecd63d2c54bd0a3b6b14cd 241 Pfam PF00929 Exonuclease 52 222 5.0E-16 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A2012 cdea5280c6ecd63d2c54bd0a3b6b14cd 241 SUPERFAMILY SSF53098 43 230 4.43E-39 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PIRSF PIRSF001369 15 387 1.2E-115 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 ProSitePatterns PS00480 Citrate synthase signature. 269 281 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 319 335 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 209 237 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 262 282 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 136 149 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 187 202 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 PRINTS PR00143 Citrate synthase signature 339 353 7.4E-36 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 Gene3D G3DSA:1.10.580.10 42 366 1.4E-116 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 SUPERFAMILY SSF48256 21 386 1.57E-123 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 Gene3D G3DSA:1.10.230.10 235 333 1.4E-116 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 Pfam PF00285 Citrate synthase, C-terminal domain 21 368 1.2E-112 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1831 6160cc635eaad53dd977dd7dbf0276e9 387 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 386 1.5E-159 T 15-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VIBNI_A3582 cf13d549bbaabc419fe49ce9d37afae6 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 4.9E-39 T 15-10-2018 IPR007446 Pilus assembly protein PilP VIBNI_A3582 cf13d549bbaabc419fe49ce9d37afae6 170 PIRSF PIRSF016481 1 170 6.2E-49 T 15-10-2018 IPR007446 Pilus assembly protein PilP VIBNI_A3582 cf13d549bbaabc419fe49ce9d37afae6 170 Gene3D G3DSA:2.30.30.830 78 170 1.6E-25 T 15-10-2018 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 Gene3D G3DSA:2.20.28.120 1 55 1.3E-29 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 Pfam PF00471 Ribosomal protein L33 7 53 2.9E-17 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 SUPERFAMILY SSF57829 1 53 2.14E-19 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.2E-25 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3697 6b0b59b5c1d1a434006e36c464517243 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.76 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0426 73a8e8ad2b1e7cab32c81d3e654d3106 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.8E-15 T 15-10-2018 IPR003849 Preprotein translocase YajC VIBNI_A0426 73a8e8ad2b1e7cab32c81d3e654d3106 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.8E-15 T 15-10-2018 IPR003849 Preprotein translocase YajC VIBNI_A0426 73a8e8ad2b1e7cab32c81d3e654d3106 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 5.3E-30 T 15-10-2018 IPR003849 Preprotein translocase YajC VIBNI_A0426 73a8e8ad2b1e7cab32c81d3e654d3106 110 SMART SM01323 18 102 5.9E-39 T 15-10-2018 IPR003849 Preprotein translocase YajC VIBNI_A0426 73a8e8ad2b1e7cab32c81d3e654d3106 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.0E-26 T 15-10-2018 IPR003849 Preprotein translocase YajC VIBNI_A2394 7c201c395431d70855802e1423680f06 197 Pfam PF02810 SEC-C motif 179 197 6.5E-9 T 15-10-2018 IPR004027 SEC-C motif VIBNI_A2394 7c201c395431d70855802e1423680f06 197 Gene3D G3DSA:3.10.450.50 152 197 1.1E-8 T 15-10-2018 VIBNI_A2394 7c201c395431d70855802e1423680f06 197 SUPERFAMILY SSF103642 177 196 6.05E-7 T 15-10-2018 VIBNI_A0150 ebfd05b8a76c6ae051c32be556dd3084 398 Pfam PF00696 Amino acid kinase family 9 235 7.8E-50 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VIBNI_A0150 ebfd05b8a76c6ae051c32be556dd3084 398 ProSitePatterns PS00324 Aspartokinase signature. 11 19 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A0150 ebfd05b8a76c6ae051c32be556dd3084 398 Gene3D G3DSA:3.40.1160.10 8 262 3.6E-85 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0150 ebfd05b8a76c6ae051c32be556dd3084 398 SUPERFAMILY SSF53633 10 249 2.23E-73 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VIBNI_A0150 ebfd05b8a76c6ae051c32be556dd3084 398 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 69 314 6.4E-73 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VIBNI_A3077 ac5ad25a085841db1b0a7f52016e735f 331 SUPERFAMILY SSF63712 22 210 2.35E-18 T 15-10-2018 IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily GO:0005230|GO:0006811|GO:0016021 VIBNI_A3077 ac5ad25a085841db1b0a7f52016e735f 331 Pfam PF02931 Neurotransmitter-gated ion-channel ligand binding domain 22 210 3.6E-17 T 15-10-2018 IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain GO:0005230|GO:0006811|GO:0016021 VIBNI_A3077 ac5ad25a085841db1b0a7f52016e735f 331 Gene3D G3DSA:2.70.170.10 15 213 7.7E-36 T 15-10-2018 IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily GO:0005230|GO:0006811|GO:0016021 VIBNI_A3077 ac5ad25a085841db1b0a7f52016e735f 331 Gene3D G3DSA:1.20.58.390 214 329 5.3E-24 T 15-10-2018 VIBNI_A3077 ac5ad25a085841db1b0a7f52016e735f 331 SUPERFAMILY SSF90112 210 316 2.49E-9 T 15-10-2018 IPR036719 Neurotransmitter-gated ion-channel transmembrane domain superfamily GO:0006811|GO:0016021 VIBNI_B0003 3056a3646ecce38af5ffbea932123962 324 SMART SM00470 58 149 6.9E-7 T 15-10-2018 IPR003115 ParB/Sulfiredoxin VIBNI_B0003 3056a3646ecce38af5ffbea932123962 324 Gene3D G3DSA:1.10.10.2830 153 278 5.6E-14 T 15-10-2018 VIBNI_B0003 3056a3646ecce38af5ffbea932123962 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 66 230 1.1E-21 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VIBNI_B0003 3056a3646ecce38af5ffbea932123962 324 Pfam PF02195 ParB-like nuclease domain 72 144 5.4E-8 T 15-10-2018 IPR003115 ParB/Sulfiredoxin VIBNI_B0003 3056a3646ecce38af5ffbea932123962 324 SUPERFAMILY SSF110849 75 150 1.7E-8 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VIBNI_B0336 01862f8b723c5cbe611adec6774331ab 172 SUPERFAMILY SSF141452 3 169 2.62E-39 T 15-10-2018 IPR036624 Hcp1-like superfamily VIBNI_B0336 01862f8b723c5cbe611adec6774331ab 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 4.7E-64 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp VIBNI_B0336 01862f8b723c5cbe611adec6774331ab 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.0E-33 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp VIBNI_B0336 01862f8b723c5cbe611adec6774331ab 172 Gene3D G3DSA:2.30.110.20 2 172 2.1E-67 T 15-10-2018 IPR036624 Hcp1-like superfamily VIBNI_B1929 28c2c96d2a04e379725795ffc1578975 120 SUPERFAMILY SSF54427 1 113 4.45E-17 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B1929 28c2c96d2a04e379725795ffc1578975 120 Gene3D G3DSA:3.10.450.50 1 115 2.7E-18 T 15-10-2018 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 SMART SM00420 7 59 6.8E-14 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 Gene3D G3DSA:1.10.10.10 1 54 1.0E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 SMART SM01134 74 235 2.8E-70 T 15-10-2018 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 SUPERFAMILY SSF46785 4 71 1.03E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 SUPERFAMILY SSF100950 75 235 3.29E-34 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 Gene3D G3DSA:3.30.750.70 71 138 5.2E-6 T 15-10-2018 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.8E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.8E-5 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 5.0E-16 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VIBNI_A0980 7a4febaaae8930bf233035d7f83e8990 259 Pfam PF00455 DeoR C terminal sensor domain 77 234 1.7E-52 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain VIBNI_A3450 9f144298f8f5630bf106b6af5abd9292 176 Gene3D G3DSA:1.20.1260.10 1 175 4.8E-54 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A3450 9f144298f8f5630bf106b6af5abd9292 176 Pfam PF00210 Ferritin-like domain 8 143 5.0E-40 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VIBNI_A3450 9f144298f8f5630bf106b6af5abd9292 176 SUPERFAMILY SSF47240 1 159 3.37E-59 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 SUPERFAMILY SSF54843 1 109 7.72E-45 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.606 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 3.5E-50 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 Gene3D G3DSA:3.90.470.10 1 110 1.7E-48 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3173 651ea14c98ef9fe49687a97157b0b60b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 7.0E-40 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VIBNI_A2167 48af77d1034e963c2d44722306ce2739 253 SUPERFAMILY SSF52540 21 222 2.17E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2167 48af77d1034e963c2d44722306ce2739 253 Gene3D G3DSA:3.40.50.300 13 249 3.6E-54 T 15-10-2018 VIBNI_A2167 48af77d1034e963c2d44722306ce2739 253 Pfam PF00005 ABC transporter 33 177 9.3E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2167 48af77d1034e963c2d44722306ce2739 253 SMART SM00382 41 221 0.0013 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0511 97ba9d495b876fccda4d47c5f6f99228 114 SUPERFAMILY SSF54909 1 100 2.68E-24 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0511 97ba9d495b876fccda4d47c5f6f99228 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 1.7E-10 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VIBNI_B0511 97ba9d495b876fccda4d47c5f6f99228 114 Gene3D G3DSA:3.30.70.100 1 93 2.0E-24 T 15-10-2018 VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 SUPERFAMILY SSF46785 4 87 1.63E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 SUPERFAMILY SSF53850 90 298 1.23E-36 T 15-10-2018 VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.4E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 Pfam PF03466 LysR substrate binding domain 89 297 1.7E-36 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 Gene3D G3DSA:3.40.190.10 92 294 1.3E-50 T 15-10-2018 VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 Gene3D G3DSA:3.40.190.10 163 268 1.3E-50 T 15-10-2018 VIBNI_B0801 39b16bc1c289256d254109effde637d1 300 Gene3D G3DSA:1.10.10.10 3 89 2.0E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PIRSF PIRSF000149 1 331 6.3E-114 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 SMART SM00846 3 152 7.1E-67 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 SUPERFAMILY SSF51735 1 173 9.88E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 Gene3D G3DSA:3.30.360.10 151 315 9.0E-125 T 15-10-2018 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 7.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.1E-29 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.8E-118 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 Gene3D G3DSA:3.40.50.720 4 327 9.0E-125 T 15-10-2018 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 SUPERFAMILY SSF55347 152 314 2.44E-63 T 15-10-2018 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.2E-30 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A3753 20af982d5a1d3704b0d278d93c934fc0 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.6E-59 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1429 b6d85ae2435fbf7450d4e8bc47a5bbf1 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 1.0E-138 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VIBNI_A1429 b6d85ae2435fbf7450d4e8bc47a5bbf1 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 2.0E-149 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 SMART SM00382 99 390 3.7E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Pfam PF04408 Helicase associated domain (HA2) 472 563 8.4E-19 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Gene3D G3DSA:3.40.50.300 34 259 5.0E-78 T 15-10-2018 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Pfam PF11898 Domain of unknown function (DUF3418) 718 1302 9.3E-229 T 15-10-2018 IPR024590 RNA helicase HrpA, C-terminal VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 21 1302 0.0 T 15-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Pfam PF00271 Helicase conserved C-terminal domain 295 409 1.8E-11 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 SUPERFAMILY SSF52540 81 573 7.17E-117 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 SMART SM00487 79 266 1.2E-30 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Pfam PF00270 DEAD/DEAH box helicase 95 240 8.6E-8 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 SMART SM00847 470 565 2.9E-39 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 628 704 1.6E-22 T 15-10-2018 IPR011709 Domain of unknown function DUF1605 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 SMART SM00490 310 410 3.6E-15 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Gene3D G3DSA:3.40.50.300 260 427 1.4E-55 T 15-10-2018 VIBNI_A1893 f4db7bef33350046fb2318beef99126a 1304 Gene3D G3DSA:1.20.120.1080 454 554 3.2E-20 T 15-10-2018 VIBNI_A1830 f94b01d69b40f9de233d775d8c390e45 483 Pfam PF03972 MmgE/PrpD family 19 465 2.3E-152 T 15-10-2018 IPR005656 MmgE/PrpD GO:0016829 VIBNI_A1830 f94b01d69b40f9de233d775d8c390e45 483 SUPERFAMILY SSF103378 13 480 2.88E-153 T 15-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 VIBNI_A1830 f94b01d69b40f9de233d775d8c390e45 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 482 1.8E-258 T 15-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 VIBNI_A1830 f94b01d69b40f9de233d775d8c390e45 483 Gene3D G3DSA:3.30.1330.120 286 425 1.9E-188 T 15-10-2018 VIBNI_A1830 f94b01d69b40f9de233d775d8c390e45 483 Gene3D G3DSA:1.10.4100.10 23 460 1.9E-188 T 15-10-2018 VIBNI_B0687 fdc2e92decb96184c529f9f5b40a505a 294 Pfam PF00482 Type II secretion system (T2SS), protein F 156 282 1.6E-14 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_B0341 ef9a984ef673704b2868d263b1f56e68 328 Pfam PF06996 Type VI secretion, TssG 19 314 4.6E-88 T 15-10-2018 IPR010732 Type VI secretion, TssG-like VIBNI_B0341 ef9a984ef673704b2868d263b1f56e68 328 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 18 314 2.6E-95 T 15-10-2018 IPR010732 Type VI secretion, TssG-like VIBNI_A3720 bfe8f8f4a8b830490141902981a98bbe 441 Gene3D G3DSA:3.40.50.2000 212 378 2.9E-60 T 15-10-2018 VIBNI_A3720 bfe8f8f4a8b830490141902981a98bbe 441 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 298 364 4.0E-5 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VIBNI_A3720 bfe8f8f4a8b830490141902981a98bbe 441 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 138 6.4E-7 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3720 bfe8f8f4a8b830490141902981a98bbe 441 Gene3D G3DSA:3.40.50.2000 13 381 2.9E-60 T 15-10-2018 VIBNI_A3720 bfe8f8f4a8b830490141902981a98bbe 441 SUPERFAMILY SSF53756 1 394 1.66E-63 T 15-10-2018 VIBNI_B1002 e1ae07ded0df3889d6079e32a46825a9 391 Gene3D G3DSA:1.20.1250.20 1 382 7.1E-41 T 15-10-2018 VIBNI_B1002 e1ae07ded0df3889d6079e32a46825a9 391 SUPERFAMILY SSF103473 2 384 1.96E-43 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1002 e1ae07ded0df3889d6079e32a46825a9 391 Pfam PF07690 Major Facilitator Superfamily 9 244 2.3E-16 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 SUPERFAMILY SSF52743 30 449 2.49E-63 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 Pfam PF01483 Proprotein convertase P-domain 492 581 5.8E-19 T 15-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 SUPERFAMILY SSF49785 455 619 1.53E-25 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 Gene3D G3DSA:3.40.50.200 29 453 9.9E-107 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 82 93 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 77 96 4.7E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 119 132 4.7E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 4.7E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 Pfam PF00082 Subtilase family 77 400 2.8E-33 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 Gene3D G3DSA:2.60.120.260 455 620 1.7E-53 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A3558 9d3c4f4c38778237bf19a729b510689b 620 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 123 133 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VIBNI_A1372 526cf201cd6e7fa913b0b7d477164061 232 Pfam PF00849 RNA pseudouridylate synthase 11 153 2.0E-26 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A1372 526cf201cd6e7fa913b0b7d477164061 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A1372 526cf201cd6e7fa913b0b7d477164061 232 SUPERFAMILY SSF55120 2 190 7.52E-45 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A1372 526cf201cd6e7fa913b0b7d477164061 232 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 219 1.6E-94 T 15-10-2018 IPR006508 Pseudouridine synthase, RluA-like VIBNI_A1372 526cf201cd6e7fa913b0b7d477164061 232 Gene3D G3DSA:3.30.2350.10 1 195 1.4E-47 T 15-10-2018 VIBNI_A1026 f44e8ff7b35ef8098d290dd6c2bdf93d 767 SUPERFAMILY SSF52151 64 745 8.2E-38 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_A1026 f44e8ff7b35ef8098d290dd6c2bdf93d 767 Pfam PF01734 Patatin-like phospholipase 91 191 2.4E-9 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_A1026 f44e8ff7b35ef8098d290dd6c2bdf93d 767 Gene3D G3DSA:3.40.1090.10 39 182 9.9E-15 T 15-10-2018 VIBNI_A1292 b32e485c095493a252c6bafc77d9e6bc 459 Gene3D G3DSA:3.40.190.10 79 408 1.8E-73 T 15-10-2018 VIBNI_A1292 b32e485c095493a252c6bafc77d9e6bc 459 SUPERFAMILY SSF53850 66 459 5.98E-53 T 15-10-2018 VIBNI_A1292 b32e485c095493a252c6bafc77d9e6bc 459 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 41 3.3E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_A1292 b32e485c095493a252c6bafc77d9e6bc 459 Gene3D G3DSA:3.40.190.10 183 451 1.8E-73 T 15-10-2018 VIBNI_A1292 b32e485c095493a252c6bafc77d9e6bc 459 Pfam PF01547 Bacterial extracellular solute-binding protein 80 366 1.1E-32 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1108 f51680940a1a724be14d6b0092d4ed60 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.1E-112 T 15-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1108 f51680940a1a724be14d6b0092d4ed60 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 3.3E-37 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1108 f51680940a1a724be14d6b0092d4ed60 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.679 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1108 f51680940a1a724be14d6b0092d4ed60 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 5.1E-31 T 15-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1108 f51680940a1a724be14d6b0092d4ed60 400 Gene3D G3DSA:3.40.50.720 1 398 7.8E-181 T 15-10-2018 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 Gene3D G3DSA:3.90.780.10 366 564 8.2E-34 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 Pfam PF00149 Calcineurin-like phosphoesterase 10 248 7.6E-12 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 Pfam PF02872 5'-nucleotidase, C-terminal domain 368 535 2.2E-20 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 PRINTS PR01607 Apyrase family signature 231 254 1.1E-17 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 PRINTS PR01607 Apyrase family signature 8 26 1.1E-17 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 PRINTS PR01607 Apyrase family signature 212 229 1.1E-17 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 PRINTS PR01607 Apyrase family signature 510 529 1.1E-17 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 PRINTS PR01607 Apyrase family signature 271 291 1.1E-17 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 SUPERFAMILY SSF55816 366 563 1.23E-38 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 Gene3D G3DSA:3.60.21.10 1 365 4.3E-86 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B1186 3271ef7c326574672665f6caacb188c7 565 SUPERFAMILY SSF56300 6 355 7.12E-74 T 15-10-2018 VIBNI_A1548 c29505aba1dd44b78a3a402e1364d1bc 274 Gene3D G3DSA:3.20.20.150 3 250 8.2E-33 T 15-10-2018 VIBNI_A1548 c29505aba1dd44b78a3a402e1364d1bc 274 SUPERFAMILY SSF51658 1 245 2.09E-32 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A1548 c29505aba1dd44b78a3a402e1364d1bc 274 Pfam PF01261 Xylose isomerase-like TIM barrel 49 205 4.3E-14 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_B0868 3f4d2a8d296e52bbc76c3323a2f71527 343 SUPERFAMILY SSF53474 80 197 1.01E-17 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0868 3f4d2a8d296e52bbc76c3323a2f71527 343 Gene3D G3DSA:3.40.50.1820 71 190 1.5E-10 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0868 3f4d2a8d296e52bbc76c3323a2f71527 343 Pfam PF11187 Protein of unknown function (DUF2974) 100 197 9.1E-8 T 15-10-2018 IPR024499 Protein of unknown function DUF2974 VIBNI_A3130 de24aa7ee69441ed3ebb2d4b96c8fc84 418 Pfam PF02687 FtsX-like permease family 316 409 1.8E-9 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A3130 de24aa7ee69441ed3ebb2d4b96c8fc84 418 Pfam PF12704 MacB-like periplasmic core domain 19 206 6.9E-11 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 Gene3D G3DSA:2.70.98.90 64 332 1.6E-89 T 15-10-2018 IPR038221 YidC, periplasmic domain superfamily VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 216 234 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 73 94 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 323 343 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 461 483 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 163 183 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 251 266 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 498 521 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR00701 60kDa inner membrane protein signature 414 437 3.9E-100 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.0E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.0E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.0E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 1.8E-109 T 15-10-2018 IPR028053 Membrane insertase YidC, N-terminal VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 25.767 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.0E-73 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 Pfam PF14849 YidC periplasmic domain 68 342 1.5E-84 T 15-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VIBNI_A3886 dc5bf21d6f8879b26500cb5249384684 542 Pfam PF02096 60Kd inner membrane protein 353 532 8.7E-63 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 SUPERFAMILY SSF57863 86 157 1.18E-10 T 15-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 SUPERFAMILY SSF50249 6 76 2.23E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 228 2.6E-41 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 Pfam PF02565 Recombination protein O C terminal 86 226 1.4E-23 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 Gene3D G3DSA:2.40.50.140 2 79 2.3E-33 T 15-10-2018 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 Hamap MF_00201 DNA repair protein RecO [recO]. 2 232 22.786 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 Gene3D G3DSA:1.20.1440.120 80 234 7.4E-52 T 15-10-2018 VIBNI_A0116 6c6517a64c6bc945668120877003b4c9 242 Pfam PF11967 Recombination protein O N terminal 5 77 2.5E-24 T 15-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VIBNI_B1342 41019250ecf6e91c83fded692f419aec 402 SUPERFAMILY SSF103473 7 387 4.45E-60 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1342 41019250ecf6e91c83fded692f419aec 402 Pfam PF07690 Major Facilitator Superfamily 15 354 3.8E-43 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1342 41019250ecf6e91c83fded692f419aec 402 Gene3D G3DSA:1.20.1720.10 10 387 1.8E-96 T 15-10-2018 VIBNI_B0217 8d71a497d990cae5e8e0434ab960ad1d 437 PIRSF PIRSF006066 1 436 5.0E-122 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0217 8d71a497d990cae5e8e0434ab960ad1d 437 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 425 7.0E-101 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0217 8d71a497d990cae5e8e0434ab960ad1d 437 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 431 1.8E-115 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0701 09a48b41ebb307dbd5501b2dd0e41fd5 491 Gene3D G3DSA:3.30.1120.10 403 481 3.0E-14 T 15-10-2018 VIBNI_B0701 09a48b41ebb307dbd5501b2dd0e41fd5 491 Gene3D G3DSA:3.40.720.10 4 376 1.2E-87 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_B0701 09a48b41ebb307dbd5501b2dd0e41fd5 491 SUPERFAMILY SSF53649 2 471 8.51E-88 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_B0701 09a48b41ebb307dbd5501b2dd0e41fd5 491 Pfam PF00884 Sulfatase 4 355 8.4E-58 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_B1195 d727deae892a122dd2e52d52275d8061 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 3 195 19.826 T 15-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 VIBNI_B1195 d727deae892a122dd2e52d52275d8061 199 Pfam PF01794 Ferric reductase like transmembrane component 48 159 2.5E-15 T 15-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VIBNI_A3233 c477e35a025c8e81b8111257dc70bc72 295 Pfam PF00892 EamA-like transporter family 4 133 7.6E-17 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3233 c477e35a025c8e81b8111257dc70bc72 295 Pfam PF00892 EamA-like transporter family 156 294 1.3E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3233 c477e35a025c8e81b8111257dc70bc72 295 SUPERFAMILY SSF103481 214 293 4.58E-12 T 15-10-2018 VIBNI_A3233 c477e35a025c8e81b8111257dc70bc72 295 SUPERFAMILY SSF103481 36 140 1.7E-13 T 15-10-2018 VIBNI_B1646 f0ed799854c02738168cde3cea9de3e7 335 Pfam PF00962 Adenosine/AMP deaminase 8 325 4.7E-73 T 15-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VIBNI_B1646 f0ed799854c02738168cde3cea9de3e7 335 SUPERFAMILY SSF51556 3 330 1.27E-90 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B1646 f0ed799854c02738168cde3cea9de3e7 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 2.4E-116 T 15-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VIBNI_B1646 f0ed799854c02738168cde3cea9de3e7 335 Gene3D G3DSA:3.20.20.140 1 334 2.9E-103 T 15-10-2018 VIBNI_B1646 f0ed799854c02738168cde3cea9de3e7 335 Hamap MF_01962 Adenine deaminase. 4 316 86.557 T 15-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 VIBNI_A0624 e4963e12362743ed96d621fce82eb976 298 Gene3D G3DSA:3.40.50.1980 21 185 7.0E-20 T 15-10-2018 VIBNI_A0624 e4963e12362743ed96d621fce82eb976 298 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 274 7.4E-20 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VIBNI_A0624 e4963e12362743ed96d621fce82eb976 298 SUPERFAMILY SSF53807 14 285 6.38E-50 T 15-10-2018 VIBNI_A3660 fc728b6471e40f2033b6fc56a4f5cf1b 353 SUPERFAMILY SSF53756 5 351 8.37E-54 T 15-10-2018 VIBNI_A3660 fc728b6471e40f2033b6fc56a4f5cf1b 353 Gene3D G3DSA:3.40.50.2000 12 347 7.5E-43 T 15-10-2018 VIBNI_A3660 fc728b6471e40f2033b6fc56a4f5cf1b 353 Pfam PF00534 Glycosyl transferases group 1 185 335 1.1E-21 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A3660 fc728b6471e40f2033b6fc56a4f5cf1b 353 Gene3D G3DSA:3.40.50.2000 169 337 7.5E-43 T 15-10-2018 VIBNI_A3660 fc728b6471e40f2033b6fc56a4f5cf1b 353 Pfam PF13439 Glycosyltransferase Family 4 12 163 6.8E-7 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 Gene3D G3DSA:3.10.180.10 3 135 1.3E-49 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.4E-24 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 1.1E-65 T 15-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 SUPERFAMILY SSF54593 4 131 4.56E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0898 f6c7244c045e35ffdc0031223b271393 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 SUPERFAMILY SSF54826 1 112 6.06E-25 T 15-10-2018 VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 SMART SM00922 154 264 1.6E-13 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 Pfam PF13378 Enolase C-terminal domain-like 159 384 3.6E-53 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 SUPERFAMILY SSF51604 96 391 1.83E-66 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 Gene3D G3DSA:3.30.390.10 1 105 2.9E-24 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 Gene3D G3DSA:3.20.20.120 106 376 6.0E-93 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_B0658 e7bd574d322c2fbafbdaa121c94618ff 398 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 108 1.0E-14 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 Gene3D G3DSA:2.40.40.10 79 173 3.4E-37 T 15-10-2018 IPR036908 RlpA-like domain superfamily VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 Gene3D G3DSA:3.30.70.1070 189 259 2.9E-5 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 Pfam PF05036 Sporulation related domain 189 257 2.2E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 Pfam PF03330 Lytic transglycolase 79 169 1.8E-27 T 15-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 21 172 25.083 T 15-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 82 251 6.6E-45 T 15-10-2018 IPR012997 Rare lipoprotein A VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 SUPERFAMILY SSF110997 189 258 4.45E-12 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A2716 fc1449ff22c8d756f14809ee0cf1fcf6 264 SUPERFAMILY SSF50685 81 172 7.32E-11 T 15-10-2018 IPR036908 RlpA-like domain superfamily VIBNI_B1274 ead9abfb3451fd2b5525bad0c668fa97 144 Gene3D G3DSA:3.40.630.30 1 144 2.5E-19 T 15-10-2018 VIBNI_B1274 ead9abfb3451fd2b5525bad0c668fa97 144 Pfam PF00583 Acetyltransferase (GNAT) family 37 129 2.8E-10 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1274 ead9abfb3451fd2b5525bad0c668fa97 144 SUPERFAMILY SSF55729 3 140 8.68E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0975 ddd63c9e87df301e2697df7efe360b48 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 8.9E-71 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 497 1.3E-38 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 SMART SM00283 271 532 6.8E-50 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 Gene3D G3DSA:1.10.287.950 203 533 6.4E-65 T 15-10-2018 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 4.1E-5 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.1E-5 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 SUPERFAMILY SSF58104 224 533 6.8E-65 T 15-10-2018 VIBNI_A2007 90af5c2299f367e0a51c8094a5d53780 539 SMART SM00304 203 256 6.7E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 Gene3D G3DSA:1.10.357.10 17 214 3.5E-59 T 15-10-2018 VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 SUPERFAMILY SSF48498 88 213 4.75E-37 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 SUPERFAMILY SSF46689 11 90 6.67E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 7.8E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 7.8E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B0420 2a4c3624903a249cc5769d82a388a4ea 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 2.8E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3227 a785a1290f3c323445ff53ac5238806b 181 Pfam PF00929 Exonuclease 9 170 5.9E-37 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A3227 a785a1290f3c323445ff53ac5238806b 181 Gene3D G3DSA:3.30.420.10 1 181 2.4E-75 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A3227 a785a1290f3c323445ff53ac5238806b 181 SMART SM00479 7 180 1.7E-21 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A3227 a785a1290f3c323445ff53ac5238806b 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.241 T 15-10-2018 IPR022894 Oligoribonuclease GO:0000175 VIBNI_A3227 a785a1290f3c323445ff53ac5238806b 181 SUPERFAMILY SSF53098 3 180 4.3E-49 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A0818 d34fd802e98d6d7912a4fba3d0eb39ee 175 Pfam PF10973 Protein of unknown function (DUF2799) 33 114 2.0E-23 T 15-10-2018 IPR021242 Protein of unknown function DUF2799 VIBNI_A1563 fb317e294f0c369885fd95f5ae3a8d9a 122 SUPERFAMILY SSF52091 5 115 4.71E-13 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A1563 fb317e294f0c369885fd95f5ae3a8d9a 122 Gene3D G3DSA:3.30.750.24 2 119 6.9E-25 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0344 edc2d0525aaa1c268d63d2646a5e1b4c 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 5.0E-157 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VIBNI_B0344 edc2d0525aaa1c268d63d2646a5e1b4c 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 3.7E-157 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 Pfam PF01266 FAD dependent oxidoreductase 18 358 4.2E-44 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 SUPERFAMILY SSF51905 16 259 6.48E-22 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 SUPERFAMILY SSF54373 263 356 1.37E-5 T 15-10-2018 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 418 541 2.4E-20 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 Gene3D G3DSA:3.30.9.10 95 357 4.9E-98 T 15-10-2018 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 Gene3D G3DSA:3.50.50.60 18 404 4.9E-98 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 356 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 40 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 385 397 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 91 103 5.4E-17 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_B2107 cd877e3ebccf02e69e32779dfd10109a 581 Gene3D G3DSA:1.10.8.870 437 558 3.3E-17 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 Gene3D G3DSA:3.10.350.10 48 90 7.2E-11 T 15-10-2018 IPR036779 LysM domain superfamily VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 Pfam PF01476 LysM domain 49 91 1.4E-10 T 15-10-2018 IPR018392 LysM domain VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 SUPERFAMILY SSF51261 48 308 1.99E-50 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 Gene3D G3DSA:2.70.70.10 172 308 1.3E-36 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 Pfam PF01551 Peptidase family M23 210 304 1.6E-30 T 15-10-2018 IPR016047 Peptidase M23 VIBNI_A0136 3e631531e22e6d3afbf8b0ed66575aba 309 SMART SM00257 48 92 1.5E-9 T 15-10-2018 IPR018392 LysM domain VIBNI_B1663 addde033c023f18734e5ccc4b4527cd9 308 SUPERFAMILY SSF161098 90 287 8.9E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1663 addde033c023f18734e5ccc4b4527cd9 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 303 5.5E-46 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1663 addde033c023f18734e5ccc4b4527cd9 308 Gene3D G3DSA:1.10.3720.10 85 297 5.4E-27 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0414 8dd5beb7d472763bf65bfb9c889bc01d 270 Gene3D G3DSA:1.10.3720.10 1 257 3.1E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0414 8dd5beb7d472763bf65bfb9c889bc01d 270 SUPERFAMILY SSF161098 4 270 5.7E-68 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0414 8dd5beb7d472763bf65bfb9c889bc01d 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 261 1.1E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 SUPERFAMILY SSF51735 3 223 4.9E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.7E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 Gene3D G3DSA:3.40.50.720 1 239 7.6E-76 T 15-10-2018 VIBNI_A3748 2f450465add3ea138624d034a5ac5248 239 Pfam PF00106 short chain dehydrogenase 3 189 3.5E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 Pfam PF03641 Possible lysine decarboxylase 187 325 5.1E-35 T 15-10-2018 IPR031100 LOG family VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 Gene3D G3DSA:3.40.50.450 121 449 4.0E-123 T 15-10-2018 VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 Gene3D G3DSA:3.30.1850.10 1 120 3.8E-56 T 15-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 Pfam PF11892 Domain of unknown function (DUF3412) 330 449 2.4E-57 T 15-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 5.0E-50 T 15-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VIBNI_A2521 b3bf7a0975ebdddd3b0df16bc076b3c5 454 SUPERFAMILY SSF102405 119 327 1.53E-42 T 15-10-2018 VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 SMART SM00346 8 97 2.5E-20 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 SUPERFAMILY SSF46785 8 79 2.25E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 Gene3D G3DSA:1.10.10.10 6 81 4.6E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 Pfam PF01614 Bacterial transcriptional regulator 126 244 1.6E-7 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 Gene3D G3DSA:3.30.450.40 82 245 8.2E-23 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 SUPERFAMILY SSF55781 73 248 5.1E-24 T 15-10-2018 VIBNI_A0860 a6c3b4636c3b04d8706b3b28771fdefe 251 Pfam PF09339 IclR helix-turn-helix domain 10 60 5.5E-12 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_A3176 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3176 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VIBNI_A3176 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 15-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3176 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VIBNI_A3176 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 15-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A1495 7f690f0d93c13d876298edaa57665d95 213 SMART SM00855 7 164 1.1E-8 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_A1495 7f690f0d93c13d876298edaa57665d95 213 SUPERFAMILY SSF53254 8 199 8.78E-33 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_A1495 7f690f0d93c13d876298edaa57665d95 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 203 1.2E-30 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_A1495 7f690f0d93c13d876298edaa57665d95 213 Gene3D G3DSA:3.40.50.1240 2 213 5.3E-49 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 Gene3D G3DSA:3.40.50.1360 1 267 2.3E-115 T 15-10-2018 VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 SUPERFAMILY SSF100950 2 263 1.2E-102 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 2 259 1.9E-136 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 15-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.549 T 15-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VIBNI_A2581 a9789d6c1b0574886e58e8d0da84e1c4 267 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 224 4.2E-19 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VIBNI_A1230 de80ca5cfc5f215871eadf2c44a4c87a 138 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 61 120 7.9E-12 T 15-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal VIBNI_A1230 de80ca5cfc5f215871eadf2c44a4c87a 138 SUPERFAMILY SSF50249 10 123 2.4E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold VIBNI_A1230 de80ca5cfc5f215871eadf2c44a4c87a 138 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 24 60 3.3E-10 T 15-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal VIBNI_A0399 82930160eba7d9636a74e2ad7d42a39a 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.3E-36 T 15-10-2018 IPR015017 Protein of unknown function DUF1904 VIBNI_A0399 82930160eba7d9636a74e2ad7d42a39a 110 Gene3D G3DSA:3.30.429.10 1 110 1.2E-42 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A0399 82930160eba7d9636a74e2ad7d42a39a 110 SUPERFAMILY SSF55331 1 110 3.85E-35 T 15-10-2018 IPR014347 Tautomerase/MIF superfamily VIBNI_A2473 6530d837a249e68a1794cd6884e0d2b5 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.435 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VIBNI_A2473 6530d837a249e68a1794cd6884e0d2b5 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.7E-82 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VIBNI_A2473 6530d837a249e68a1794cd6884e0d2b5 191 Pfam PF13580 SIS domain 12 146 4.9E-32 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2473 6530d837a249e68a1794cd6884e0d2b5 191 SUPERFAMILY SSF53697 1 189 2.43E-53 T 15-10-2018 VIBNI_A2473 6530d837a249e68a1794cd6884e0d2b5 191 Gene3D G3DSA:3.40.50.10490 1 191 7.0E-73 T 15-10-2018 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Pfam PF07196 Flagellin hook IN motif 196 246 2.1E-9 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Gene3D G3DSA:3.30.70.2120 173 274 1.5E-65 T 15-10-2018 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Gene3D G3DSA:1.10.8.410 327 376 1.0E-15 T 15-10-2018 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Gene3D G3DSA:1.20.1330.10 44 326 1.5E-65 T 15-10-2018 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.8E-39 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 PRINTS PR00207 Flagellin signature 37 54 4.0E-23 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 PRINTS PR00207 Flagellin signature 111 134 4.0E-23 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 PRINTS PR00207 Flagellin signature 76 95 4.0E-23 T 15-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.0E-22 T 15-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VIBNI_A0712 914271d2c01d9ae892bf895284e18901 376 SUPERFAMILY SSF64518 4 375 1.44E-81 T 15-10-2018 VIBNI_A1308 de45be13ca6adafd562d6aed35b7d7b4 185 PIRSF PIRSF000847 1 185 4.9E-46 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VIBNI_A1308 de45be13ca6adafd562d6aed35b7d7b4 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 181 5.5E-56 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VIBNI_A1308 de45be13ca6adafd562d6aed35b7d7b4 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A1308 de45be13ca6adafd562d6aed35b7d7b4 185 Gene3D G3DSA:1.20.120.1760 1 181 2.8E-18 T 15-10-2018 VIBNI_A1308 de45be13ca6adafd562d6aed35b7d7b4 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.6E-18 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A1375 a567fe2f9ed85ae4b67e8b2f35e4cdbb 209 Pfam PF02581 Thiamine monophosphate synthase 6 186 3.7E-63 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1375 a567fe2f9ed85ae4b67e8b2f35e4cdbb 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.143 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1375 a567fe2f9ed85ae4b67e8b2f35e4cdbb 209 SUPERFAMILY SSF51391 3 202 2.62E-65 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1375 a567fe2f9ed85ae4b67e8b2f35e4cdbb 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 198 3.2E-65 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1375 a567fe2f9ed85ae4b67e8b2f35e4cdbb 209 Gene3D G3DSA:3.20.20.70 1 207 1.2E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B2161 37add7370939aec2aac07830e0003a26 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 7.5E-16 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VIBNI_B2161 37add7370939aec2aac07830e0003a26 92 Gene3D G3DSA:3.30.2310.20 1 90 3.0E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VIBNI_B2161 37add7370939aec2aac07830e0003a26 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 7.5E-15 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VIBNI_B1595 8eb4fa97405cbe0f889bc6b92df4f0fd 125 Gene3D G3DSA:3.30.720.110 69 123 5.9E-11 T 15-10-2018 VIBNI_B1595 8eb4fa97405cbe0f889bc6b92df4f0fd 125 SUPERFAMILY SSF54593 6 121 6.85E-20 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1595 8eb4fa97405cbe0f889bc6b92df4f0fd 125 Gene3D G3DSA:3.30.720.120 5 53 3.7E-10 T 15-10-2018 VIBNI_B1595 8eb4fa97405cbe0f889bc6b92df4f0fd 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 117 3.9E-7 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 Gene3D G3DSA:1.10.8.1080 222 298 1.1E-15 T 15-10-2018 VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 Gene3D G3DSA:3.40.50.10490 5 221 5.7E-70 T 15-10-2018 VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 34.986 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 Pfam PF13580 SIS domain 39 168 1.2E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 10 289 1.5E-95 T 15-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VIBNI_A2385 d74dc8967600dd9f2f7d26596ef31d94 307 SUPERFAMILY SSF53697 9 248 3.52E-65 T 15-10-2018 VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 78 6.6E-10 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 SUPERFAMILY SSF48008 108 245 1.54E-15 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 Gene3D G3DSA:1.20.120.530 92 250 2.9E-17 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 SUPERFAMILY SSF46785 17 93 3.44E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 SMART SM00895 110 241 1.0E-7 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 Pfam PF07729 FCD domain 110 240 2.7E-15 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 7.7E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 7.7E-7 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A0967 3793246f1ba020c5f66e394b157c98dc 264 Gene3D G3DSA:1.10.10.10 3 85 9.5E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 262 2.5E-58 T 15-10-2018 VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 SUPERFAMILY SSF51735 9 264 9.01E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 3.5E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.9E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.9E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.9E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B2088 a12aa6eddbdc1626dbf94f76a5da1d19 265 Gene3D G3DSA:3.40.50.720 1 264 5.7E-84 T 15-10-2018 VIBNI_B1200 631d0c0bc4120456e830acf2b26253b4 263 Gene3D G3DSA:3.20.20.450 23 259 1.3E-42 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1200 631d0c0bc4120456e830acf2b26253b4 263 Pfam PF00563 EAL domain 31 253 8.4E-40 T 15-10-2018 IPR001633 EAL domain VIBNI_B1200 631d0c0bc4120456e830acf2b26253b4 263 SMART SM00052 21 258 2.9E-10 T 15-10-2018 IPR001633 EAL domain VIBNI_B1200 631d0c0bc4120456e830acf2b26253b4 263 SUPERFAMILY SSF141868 30 257 8.5E-42 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1465 4c2781910ebc073e07565e877c42ce2d 186 SUPERFAMILY SSF51645 29 181 1.29E-11 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A1465 4c2781910ebc073e07565e877c42ce2d 186 Gene3D G3DSA:2.170.170.11 11 133 1.1E-29 T 15-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VIBNI_A0586 71a031819b870388777f941e101d06b3 358 Pfam PF03824 High-affinity nickel-transport protein 13 355 3.3E-46 T 15-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 VIBNI_B0943 6b2aab3f5eb51663bb130b1974afa3fc 123 Pfam PF13302 Acetyltransferase (GNAT) domain 10 94 1.5E-20 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0943 6b2aab3f5eb51663bb130b1974afa3fc 123 SUPERFAMILY SSF55729 7 120 2.02E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0943 6b2aab3f5eb51663bb130b1974afa3fc 123 Gene3D G3DSA:3.40.630.30 1 122 1.5E-35 T 15-10-2018 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 9.9E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 SUPERFAMILY SSF52172 26 190 3.73E-7 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 SUPERFAMILY SSF52540 146 380 1.01E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 SMART SM00382 166 307 1.8E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 Gene3D G3DSA:1.10.8.60 311 387 1.1E-22 T 15-10-2018 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 Gene3D G3DSA:1.10.10.60 388 441 3.3E-12 T 15-10-2018 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 Pfam PF00158 Sigma-54 interaction domain 146 306 7.0E-39 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 SUPERFAMILY SSF46689 353 439 8.96E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A0322 e3b05e96293bf7d85e005d865736b597 445 Gene3D G3DSA:3.40.50.300 137 310 4.5E-39 T 15-10-2018 VIBNI_A0813 f5ef6281a22a1eb49f9a487adf501c0e 135 PIRSF PIRSF016789 9 130 1.9E-40 T 15-10-2018 IPR007401 Protein of unknown function DUF454 VIBNI_A0813 f5ef6281a22a1eb49f9a487adf501c0e 135 Pfam PF04304 Protein of unknown function (DUF454) 10 123 1.1E-38 T 15-10-2018 IPR007401 Protein of unknown function DUF454 VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 Gene3D G3DSA:1.20.1440.100 15 87 1.5E-32 T 15-10-2018 VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 SUPERFAMILY SSF56784 2 187 1.12E-27 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 3.4E-31 T 15-10-2018 VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 191 2.8E-34 T 15-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 Gene3D G3DSA:3.40.50.1000 3 188 1.5E-32 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1876 fbaba087cbd3cdeb9e6c9e28dde891c2 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 186 3.5E-25 T 15-10-2018 VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 PIRSF PIRSF002741 8 537 1.2E-64 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 9.7E-76 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 Gene3D G3DSA:3.90.76.10 65 171 8.7E-192 T 15-10-2018 VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 Gene3D G3DSA:3.10.105.10 271 518 8.7E-192 T 15-10-2018 VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 SUPERFAMILY SSF53850 41 543 5.07E-107 T 15-10-2018 VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site VIBNI_A2822 68f8b475fafe59c4a241111b06952792 559 Gene3D G3DSA:3.40.190.10 45 542 8.7E-192 T 15-10-2018 VIBNI_A1220 cd83a71563bc7b5c285d4b2735718f24 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 330 8.3E-32 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 SMART SM00342 234 317 7.1E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 Pfam PF12833 Helix-turn-helix domain 240 318 2.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 1.8E-6 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 SUPERFAMILY SSF46689 271 318 2.02E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 Gene3D G3DSA:1.10.10.60 213 320 1.2E-24 T 15-10-2018 VIBNI_B1518 23e0dcca05316cd4527f694dfbd01277 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 271 313 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.2E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.2E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.2E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.2E-51 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 SMART SM00864 13 205 2.5E-113 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 SUPERFAMILY SSF55307 204 320 1.17E-42 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 SUPERFAMILY SSF52490 13 208 4.97E-69 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 339 3.1E-137 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.8E-36 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 2.1E-39 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 Gene3D G3DSA:3.40.50.1440 5 220 1.1E-79 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 SMART SM00865 207 325 4.9E-56 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 Gene3D G3DSA:3.30.1330.20 221 328 1.9E-34 T 15-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VIBNI_A0233 21fb049bae6c75d7c79d001e715feb13 410 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 369 38.245 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VIBNI_A0145 f2c5866989859116b745daf087c799c7 161 Pfam PF02464 Competence-damaged protein 5 159 2.0E-58 T 15-10-2018 IPR008136 CinA, C-terminal VIBNI_A0145 f2c5866989859116b745daf087c799c7 161 SUPERFAMILY SSF142433 6 160 3.27E-56 T 15-10-2018 IPR036653 CinA-like, C-terminal VIBNI_A0145 f2c5866989859116b745daf087c799c7 161 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 157 1.0E-51 T 15-10-2018 IPR008136 CinA, C-terminal VIBNI_A0145 f2c5866989859116b745daf087c799c7 161 Gene3D G3DSA:3.90.950.20 1 160 7.7E-58 T 15-10-2018 IPR036653 CinA-like, C-terminal VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 287 8.0E-58 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 SUPERFAMILY SSF52283 6 127 1.42E-24 T 15-10-2018 VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 SUPERFAMILY SSF51735 107 287 1.13E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 Gene3D G3DSA:3.40.50.720 40 310 5.1E-90 T 15-10-2018 VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 Gene3D G3DSA:3.40.50.720 105 288 5.1E-90 T 15-10-2018 VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 314 4.4E-20 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VIBNI_A1509 7bf7a01d03a6ac89a34fbfa12f2eb027 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VIBNI_B1493 282820dd72fa0fe8d4794951dd16a0de 417 Pfam PF13520 Amino acid permease 9 402 6.2E-28 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VIBNI_B1493 282820dd72fa0fe8d4794951dd16a0de 417 PIRSF PIRSF006060 1 411 3.2E-56 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VIBNI_B1493 282820dd72fa0fe8d4794951dd16a0de 417 Gene3D G3DSA:1.20.1740.10 2 413 4.4E-59 T 15-10-2018 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 9.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 9.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 9.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 9.9E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Gene3D G3DSA:3.30.565.10 308 472 1.8E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SUPERFAMILY SSF55874 295 464 1.02E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SMART SM00448 491 605 1.6E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SUPERFAMILY SSF158472 175 223 1.02E-5 T 15-10-2018 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SMART SM00304 174 226 1.3E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Pfam PF01627 Hpt domain 664 734 2.1E-6 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SMART SM00388 241 306 4.5E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 305 3.1E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 467 1.3E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SMART SM00387 353 468 6.0E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Gene3D G3DSA:1.20.120.160 637 749 5.2E-17 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Gene3D G3DSA:3.40.50.2300 489 636 1.6E-40 T 15-10-2018 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SUPERFAMILY SSF47384 227 306 5.89E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Gene3D G3DSA:1.20.1480.50 137 230 4.2E-9 T 15-10-2018 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SUPERFAMILY SSF52172 490 613 4.55E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Gene3D G3DSA:1.10.287.130 231 307 7.9E-21 T 15-10-2018 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 SUPERFAMILY SSF47226 643 750 2.62E-18 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 VIBNI_A1485 f0e4c8f90ffd98411fce3738d05cc26a 757 Pfam PF00072 Response regulator receiver domain 494 603 3.2E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0222 dc29aabc333e52a9b79d5d8dd7eb3289 108 Hamap MF_00910 Cell division protein FtsL [ftsL]. 22 105 16.302 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VIBNI_A0222 dc29aabc333e52a9b79d5d8dd7eb3289 108 Pfam PF04999 Cell division protein FtsL 11 106 7.4E-35 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VIBNI_A0222 dc29aabc333e52a9b79d5d8dd7eb3289 108 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 105 2.0E-25 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VIBNI_A2747 7641eea04ef659da7fe4987e6670cb0e 346 Gene3D G3DSA:3.40.718.10 1 334 1.4E-104 T 15-10-2018 VIBNI_A2747 7641eea04ef659da7fe4987e6670cb0e 346 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 328 7.1E-84 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VIBNI_A2747 7641eea04ef659da7fe4987e6670cb0e 346 SUPERFAMILY SSF53659 6 335 1.97E-86 T 15-10-2018 VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 SUPERFAMILY SSF82861 22 106 7.72E-17 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 SUPERFAMILY SSF50182 108 172 3.92E-18 T 15-10-2018 IPR010920 LSM domain superfamily VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 Pfam PF05552 Conserved TM helix 15 56 6.3E-10 T 15-10-2018 IPR008910 Conserved TM helix VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 Gene3D G3DSA:2.30.30.60 123 172 8.5E-19 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 Gene3D G3DSA:3.30.70.100 174 266 6.1E-28 T 15-10-2018 VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 Pfam PF00924 Mechanosensitive ion channel 68 262 1.6E-53 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VIBNI_B0100 0a68988f61278da2b6cbdb971b3c598a 280 SUPERFAMILY SSF82689 176 273 5.62E-34 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VIBNI_B1560 731c0408568561618b8409828176d011 728 Pfam PF02446 4-alpha-glucanotransferase 182 702 2.0E-125 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VIBNI_B1560 731c0408568561618b8409828176d011 728 SUPERFAMILY SSF51445 166 721 7.59E-145 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1560 731c0408568561618b8409828176d011 728 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 132 720 8.8E-192 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VIBNI_B1560 731c0408568561618b8409828176d011 728 Gene3D G3DSA:3.20.20.80 176 721 4.6E-119 T 15-10-2018 VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 Gene3D G3DSA:1.20.120.530 79 229 9.8E-32 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 SUPERFAMILY SSF46785 5 75 9.6E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.9E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.9E-9 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 Pfam PF07729 FCD domain 93 218 8.7E-24 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 SMART SM00895 92 219 3.9E-21 T 15-10-2018 IPR011711 GntR, C-terminal VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 Gene3D G3DSA:1.10.10.10 2 77 1.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 SMART SM00345 12 71 1.7E-19 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.3E-21 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_B0403 5de9ed8a70022c43668cb4b22f989741 233 SUPERFAMILY SSF48008 88 225 1.52E-28 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VIBNI_B2053 c40dae027d3d09398573f71762474c20 349 Pfam PF00793 DAHP synthetase I family 40 337 2.0E-106 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_B2053 c40dae027d3d09398573f71762474c20 349 SUPERFAMILY SSF51569 6 347 5.34E-140 T 15-10-2018 VIBNI_B2053 c40dae027d3d09398573f71762474c20 349 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.4E-170 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_B2053 c40dae027d3d09398573f71762474c20 349 Gene3D G3DSA:3.20.20.70 1 349 5.2E-169 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B2053 c40dae027d3d09398573f71762474c20 349 PIRSF PIRSF001361 1 349 7.0E-164 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_B0404 5f1e164b3fb9444b8045e97123e94d12 797 Pfam PF15892 BNR repeat-containing family member 64 332 2.2E-40 T 15-10-2018 IPR039469 BNR repeat-containing family member VIBNI_A3349 23515fadc48c5deb79f26515fca99aeb 228 Pfam PF01902 Diphthamide synthase 7 219 1.1E-21 T 15-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VIBNI_A3349 23515fadc48c5deb79f26515fca99aeb 228 Gene3D G3DSA:3.40.50.620 3 146 1.2E-16 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3349 23515fadc48c5deb79f26515fca99aeb 228 SUPERFAMILY SSF52402 5 221 5.67E-53 T 15-10-2018 VIBNI_A3349 23515fadc48c5deb79f26515fca99aeb 228 Gene3D G3DSA:3.90.1490.10 147 226 4.1E-6 T 15-10-2018 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 SUPERFAMILY SSF52540 294 526 2.13E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 536 9.3E-4 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 1.3E-4 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 SUPERFAMILY SSF52540 6 256 2.77E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Pfam PF00005 ABC transporter 304 455 5.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 SMART SM00382 35 235 2.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 SMART SM00382 312 504 2.2E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Pfam PF00005 ABC transporter 26 185 2.5E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Gene3D G3DSA:3.40.50.300 4 277 7.5E-85 T 15-10-2018 VIBNI_B1988 afe5bc021c28496abda85a24d466bca8 539 Gene3D G3DSA:3.40.50.300 278 538 9.5E-86 T 15-10-2018 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SUPERFAMILY SSF48452 141 240 4.55E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 Pfam PF13424 Tetratricopeptide repeat 105 169 2.1E-10 T 15-10-2018 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SUPERFAMILY SSF48452 30 171 1.66E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 Gene3D G3DSA:1.25.40.10 30 250 4.2E-40 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 Pfam PF13181 Tetratricopeptide repeat 35 67 0.035 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 Pfam PF13181 Tetratricopeptide repeat 70 102 0.0038 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 238 8.9E-74 T 15-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SMART SM00028 69 102 0.083 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SMART SM00028 35 68 13.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SMART SM00028 103 136 24.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2777 b4d417f06f69ee6bb0e4fe102cfadb8d 251 SMART SM00028 139 172 0.059 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.0E-7 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 Pfam PF13411 MerR HTH family regulatory protein 4 69 2.1E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 SMART SM00422 2 70 2.1E-11 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 SUPERFAMILY SSF46955 3 120 2.05E-22 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0934 6bf8e931d79164e3ad856128c9a0883d 125 Gene3D G3DSA:1.10.1660.10 1 119 1.6E-22 T 15-10-2018 VIBNI_A2861 044fa894539ea3c2a369fce9ee4d7af1 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 5.3E-74 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VIBNI_A2861 044fa894539ea3c2a369fce9ee4d7af1 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 2.0E-82 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VIBNI_A2861 044fa894539ea3c2a369fce9ee4d7af1 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.463 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VIBNI_A2093 fc07fe5e40ce1b258eb882cd3da4a22e 137 Gene3D G3DSA:3.30.160.20 1 136 3.7E-36 T 15-10-2018 VIBNI_A2093 fc07fe5e40ce1b258eb882cd3da4a22e 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A2093 fc07fe5e40ce1b258eb882cd3da4a22e 137 Pfam PF00472 RF-1 domain 8 133 1.9E-24 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VIBNI_A2093 fc07fe5e40ce1b258eb882cd3da4a22e 137 SUPERFAMILY SSF75620 7 117 5.89E-13 T 15-10-2018 VIBNI_A0367 ca8cc4a7b55167a688ab13c9c10954e3 360 Pfam PF13433 Periplasmic binding protein domain 4 336 7.0E-28 T 15-10-2018 VIBNI_A0367 ca8cc4a7b55167a688ab13c9c10954e3 360 SUPERFAMILY SSF53822 3 336 3.7E-25 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A0367 ca8cc4a7b55167a688ab13c9c10954e3 360 Gene3D G3DSA:3.40.50.2300 6 323 1.1E-41 T 15-10-2018 VIBNI_A0367 ca8cc4a7b55167a688ab13c9c10954e3 360 Gene3D G3DSA:3.40.50.2300 117 339 1.1E-41 T 15-10-2018 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 Gene3D G3DSA:1.20.120.350 9 114 4.2E-7 T 15-10-2018 IPR027359 Voltage-dependent channel domain superfamily VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 Gene3D G3DSA:1.10.287.70 118 173 3.5E-16 T 15-10-2018 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 SUPERFAMILY SSF81324 12 210 8.77E-46 T 15-10-2018 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 Gene3D G3DSA:1.20.5.110 175 217 1.1E-18 T 15-10-2018 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 PRINTS PR00169 Potassium channel signature 6 34 5.1E-9 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 PRINTS PR00169 Potassium channel signature 45 68 5.1E-9 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 PRINTS PR00169 Potassium channel signature 154 176 5.1E-9 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 PRINTS PR00169 Potassium channel signature 183 209 5.1E-9 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VIBNI_A1462 f79b0a5e83596278a370c5ab364c01ed 253 Pfam PF00520 Ion transport protein 12 211 3.6E-18 T 15-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VIBNI_B1086 6a2a60b6b941cf5797e3f86b57c515ec 416 Gene3D G3DSA:2.40.160.60 22 416 1.4E-125 T 15-10-2018 VIBNI_B1086 6a2a60b6b941cf5797e3f86b57c515ec 416 SUPERFAMILY SSF56935 22 416 1.05E-92 T 15-10-2018 VIBNI_B1086 6a2a60b6b941cf5797e3f86b57c515ec 416 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 415 6.8E-130 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBNI_A3192 9c33ad742d48bb7d4f95a2aea8cf0032 73 Hamap MF_00715 Protein SlyX [slyX]. 6 73 17.986 T 15-10-2018 IPR007236 SlyX VIBNI_A3192 9c33ad742d48bb7d4f95a2aea8cf0032 73 Gene3D G3DSA:1.20.5.300 1 50 5.0E-8 T 15-10-2018 VIBNI_A3192 9c33ad742d48bb7d4f95a2aea8cf0032 73 Pfam PF04102 SlyX 7 73 5.1E-25 T 15-10-2018 IPR007236 SlyX VIBNI_A3304 08b42947c0351d6894ae484709281297 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.38 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VIBNI_A3304 08b42947c0351d6894ae484709281297 295 PIRSF PIRSF000401 1 295 2.0E-98 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VIBNI_A3304 08b42947c0351d6894ae484709281297 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 294 5.4E-104 T 15-10-2018 VIBNI_A3304 08b42947c0351d6894ae484709281297 295 Gene3D G3DSA:3.40.50.150 102 295 2.9E-56 T 15-10-2018 VIBNI_A3304 08b42947c0351d6894ae484709281297 295 SUPERFAMILY SSF53335 46 273 6.46E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3304 08b42947c0351d6894ae484709281297 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 8.7E-109 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 Pfam PF17092 Penicillin-binding protein OB-like domain 316 436 6.7E-30 T 15-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 767 1.9E-165 T 15-10-2018 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 SUPERFAMILY SSF56601 211 816 1.88E-112 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 SUPERFAMILY SSF53955 43 256 2.56E-76 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 Gene3D G3DSA:3.40.710.10 243 329 2.2E-8 T 15-10-2018 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 727 2.8E-27 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 Pfam PF00912 Transglycosylase 55 229 4.4E-63 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3586 2b1d651afceac5ce045a6233df4b1b81 832 Gene3D G3DSA:1.10.3810.10 48 242 6.3E-77 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 Pfam PF00563 EAL domain 277 508 1.6E-72 T 15-10-2018 IPR001633 EAL domain VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 SMART SM00267 93 261 2.8E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 254 8.6E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 SUPERFAMILY SSF55073 110 260 9.42E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 SUPERFAMILY SSF141868 276 524 3.27E-79 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 104 259 1.2E-32 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 SMART SM00052 270 515 3.4E-88 T 15-10-2018 IPR001633 EAL domain VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 Gene3D G3DSA:3.20.20.450 273 528 4.8E-86 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B1213 5da90dd3f49d289dcc6306df87a9e63c 529 Gene3D G3DSA:3.30.70.270 101 272 4.4E-48 T 15-10-2018 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 627 9.6E-39 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 Pfam PF08376 Nitrate and nitrite sensing 59 295 9.5E-34 T 15-10-2018 IPR013587 Nitrate/nitrite sensing protein VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 SMART SM00304 334 387 3.1E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 SMART SM00283 402 663 1.8E-49 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 2.7E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 2.7E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 527 2.7E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 577 606 2.7E-23 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 Gene3D G3DSA:1.10.287.950 334 665 9.1E-61 T 15-10-2018 VIBNI_B1993 ae8ea2fd17a11c132f7d60b42e5fb440 665 SUPERFAMILY SSF58104 355 664 1.23E-63 T 15-10-2018 VIBNI_A0821 c20f30e20a657b45cb5984b24e4d1f5b 280 SUPERFAMILY SSF63829 27 279 5.1E-32 T 15-10-2018 VIBNI_A0821 c20f30e20a657b45cb5984b24e4d1f5b 280 Gene3D G3DSA:2.120.10.30 17 280 1.9E-20 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VIBNI_A0821 c20f30e20a657b45cb5984b24e4d1f5b 280 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 78 250 3.9E-8 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.8E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 238 5.6E-38 T 15-10-2018 VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 6.3E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 6.3E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 6.3E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 180 1.2E-4 T 15-10-2018 VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 Gene3D G3DSA:3.40.50.720 1 239 1.0E-58 T 15-10-2018 VIBNI_A1152 3b3b988d3ab23b32e97c015ccab24969 245 SUPERFAMILY SSF51735 2 239 2.57E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Gene3D G3DSA:3.30.365.10 467 613 2.0E-286 T 15-10-2018 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 SUPERFAMILY SSF54665 16 148 1.7E-39 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 783 0.0 T 15-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 SUPERFAMILY SSF56003 147 781 2.36E-206 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 147 2.2E-24 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Gene3D G3DSA:3.30.365.10 148 778 2.0E-286 T 15-10-2018 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Gene3D G3DSA:3.90.1170.50 26 147 2.0E-286 T 15-10-2018 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Gene3D G3DSA:3.30.365.10 161 414 2.0E-286 T 15-10-2018 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 SMART SM01008 40 147 6.1E-40 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Gene3D G3DSA:3.30.365.10 195 289 2.0E-286 T 15-10-2018 VIBNI_B1482 16cc4acb046156a337c605b208b89a7f 799 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 711 9.0E-205 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 VIBNI_A3690 fd410539950427aa87e1442aeaab853d 324 Gene3D G3DSA:3.90.550.10 1 265 1.2E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3690 fd410539950427aa87e1442aeaab853d 324 Pfam PF00535 Glycosyl transferase family 2 9 132 2.2E-31 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A3690 fd410539950427aa87e1442aeaab853d 324 SUPERFAMILY SSF53448 8 226 1.13E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1244 e87bbafd4b913e9513ea4cd75ccd3222 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 296 1.9E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1244 e87bbafd4b913e9513ea4cd75ccd3222 305 SUPERFAMILY SSF160964 9 61 5.36E-6 T 15-10-2018 VIBNI_A1244 e87bbafd4b913e9513ea4cd75ccd3222 305 SUPERFAMILY SSF161098 61 287 2.49E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1244 e87bbafd4b913e9513ea4cd75ccd3222 305 Gene3D G3DSA:1.10.3720.10 56 297 9.1E-58 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 PRINTS PR00359 B-class P450 signature 148 164 8.7E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 PRINTS PR00359 B-class P450 signature 347 362 8.7E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 PRINTS PR00359 B-class P450 signature 368 377 8.7E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 PRINTS PR00359 B-class P450 signature 297 308 8.7E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 PRINTS PR00359 B-class P450 signature 209 231 8.7E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 Pfam PF00067 Cytochrome P450 63 395 1.2E-17 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 SUPERFAMILY SSF48264 58 414 6.42E-42 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 370 379 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 VIBNI_A1030 4c2f7b7cab38396b5cccc82b535a9507 447 Gene3D G3DSA:1.10.630.10 9 435 2.2E-45 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 Gene3D G3DSA:2.40.50.940 222 351 1.8E-28 T 15-10-2018 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 Gene3D G3DSA:3.40.50.300 4 221 1.5E-65 T 15-10-2018 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 SUPERFAMILY SSF50331 237 357 3.4E-20 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 Pfam PF00005 ABC transporter 21 161 9.8E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 SUPERFAMILY SSF52540 4 243 8.49E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 Gene3D G3DSA:2.40.50.140 286 342 1.8E-28 T 15-10-2018 VIBNI_B1532 f4f8b440583dda6b18c95a3862d68b74 363 SMART SM00382 28 211 5.3E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2077 946bfb4c30e32377b828fc3943f8993b 172 Pfam PF13505 Outer membrane protein beta-barrel domain 6 172 7.4E-9 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_B2077 946bfb4c30e32377b828fc3943f8993b 172 SUPERFAMILY SSF56925 54 172 1.26E-8 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A0674 1d4ec17f4acc3e5cb4f9e36cc71d204b 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 8.7E-52 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1744 3d0f849ce771a6a3ae124df37adb8808 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 4.1E-44 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VIBNI_B1744 3d0f849ce771a6a3ae124df37adb8808 126 Gene3D G3DSA:3.30.1330.40 1 126 7.7E-46 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B1744 3d0f849ce771a6a3ae124df37adb8808 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VIBNI_B1744 3d0f849ce771a6a3ae124df37adb8808 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 9.2E-35 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_B1744 3d0f849ce771a6a3ae124df37adb8808 126 SUPERFAMILY SSF55298 1 125 1.35E-39 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 SUPERFAMILY SSF51735 1 245 2.5E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.5E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.5E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.5E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 Gene3D G3DSA:3.40.50.720 1 247 4.1E-63 T 15-10-2018 VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.7E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.7E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.7E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.7E-20 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1551 41eee82934a91347a6644d49035ce664 258 Pfam PF00106 short chain dehydrogenase 6 199 9.0E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 SUPERFAMILY SSF51366 268 463 1.73E-57 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Gene3D G3DSA:3.20.20.70 19 266 9.4E-180 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 SUPERFAMILY SSF51366 23 264 1.15E-81 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 266 465 31.433 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 268 460 4.3E-57 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Gene3D G3DSA:3.20.20.70 267 459 9.4E-180 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 14 265 35.695 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VIBNI_A1273 1259156861f2f430114ae8b778835eb5 465 Pfam PF00218 Indole-3-glycerol phosphate synthase 16 262 3.9E-97 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 505 4.4E-214 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 Gene3D G3DSA:1.20.200.10 198 509 1.6E-125 T 15-10-2018 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.572 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 Gene3D G3DSA:1.10.275.10 2 197 1.1E-70 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 SUPERFAMILY SSF48557 4 503 3.3E-195 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 Pfam PF00221 Aromatic amino acid lyase 12 470 7.3E-191 T 15-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VIBNI_A1176 50190b565bb6914b4a0b624891874f17 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 15-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 Gene3D G3DSA:3.30.420.40 243 476 1.1E-38 T 15-10-2018 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 SUPERFAMILY SSF53067 251 438 2.78E-34 T 15-10-2018 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 SUPERFAMILY SSF53067 8 247 7.13E-35 T 15-10-2018 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 243 1.9E-26 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 Gene3D G3DSA:3.30.420.40 4 242 1.8E-38 T 15-10-2018 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 PIRSF PIRSF000538 6 471 4.7E-64 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_B1533 6de0adc9bddac2911a06a04289d8de97 482 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 255 438 2.2E-21 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A3829 c2824fc831775007101976379a126393 185 Gene3D G3DSA:3.90.870.10 2 183 1.9E-62 T 15-10-2018 VIBNI_A3829 c2824fc831775007101976379a126393 185 SUPERFAMILY SSF55821 4 182 4.58E-57 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VIBNI_A3829 c2824fc831775007101976379a126393 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 185 3.5E-39 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 VIBNI_A3829 c2824fc831775007101976379a126393 185 Pfam PF01300 Telomere recombination 9 185 5.7E-50 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 VIBNI_A3829 c2824fc831775007101976379a126393 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.625 T 15-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 SMART SM00862 157 233 1.2E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 Pfam PF00072 Response regulator receiver domain 6 116 4.2E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.5E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 Gene3D G3DSA:1.10.10.10 131 236 6.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 Gene3D G3DSA:3.40.50.2300 2 130 9.7E-27 T 15-10-2018 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 SMART SM00448 4 116 4.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 SUPERFAMILY SSF46894 149 234 5.1E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2758 502d2c22ade6eb420a51eb146fd679b9 236 SUPERFAMILY SSF52172 1 134 1.04E-29 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2834 31db9b4434f3e82c404055ebef779bc6 337 Gene3D G3DSA:3.40.190.10 120 328 9.9E-128 T 15-10-2018 VIBNI_A2834 31db9b4434f3e82c404055ebef779bc6 337 SUPERFAMILY SSF53850 24 332 4.05E-77 T 15-10-2018 VIBNI_A2834 31db9b4434f3e82c404055ebef779bc6 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 3.0E-19 T 15-10-2018 VIBNI_A2834 31db9b4434f3e82c404055ebef779bc6 337 PIRSF PIRSF002825 1 337 2.5E-101 T 15-10-2018 IPR026045 Ferric binding protein VIBNI_A2834 31db9b4434f3e82c404055ebef779bc6 337 Gene3D G3DSA:3.40.190.10 25 297 9.9E-128 T 15-10-2018 VIBNI_A1944 cd301142163e5d08857f8f5ed07e9ce0 340 SUPERFAMILY SSF51735 1 296 1.23E-28 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1944 cd301142163e5d08857f8f5ed07e9ce0 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 124 208 4.2E-6 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A1944 cd301142163e5d08857f8f5ed07e9ce0 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 44 3.8E-5 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A1944 cd301142163e5d08857f8f5ed07e9ce0 340 Gene3D G3DSA:3.40.50.720 2 295 1.4E-29 T 15-10-2018 VIBNI_B0851 c66e7f2e26953e668bb948a8b51658e4 276 SUPERFAMILY SSF52402 2 276 6.9E-82 T 15-10-2018 VIBNI_B0851 c66e7f2e26953e668bb948a8b51658e4 276 Gene3D G3DSA:3.40.50.620 1 276 6.1E-83 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B0851 c66e7f2e26953e668bb948a8b51658e4 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 21 272 3.8E-65 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VIBNI_B0851 c66e7f2e26953e668bb948a8b51658e4 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.231 T 15-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VIBNI_B0851 c66e7f2e26953e668bb948a8b51658e4 276 Pfam PF02540 NAD synthase 21 270 4.2E-64 T 15-10-2018 IPR022310 NAD/GMP synthase VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 Pfam PF00005 ABC transporter 26 181 1.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 SMART SM00382 34 231 1.7E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.0E-22 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.6E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 Gene3D G3DSA:3.40.50.300 3 325 7.2E-91 T 15-10-2018 VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 SUPERFAMILY SSF52540 5 252 1.18E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2825 ea38e6dc929952b51192a9379cf7fa21 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1605 d41c26442c7e0db399c0ed53806b5110 302 PRINTS PR00313 NodO calcium binding signature 105 116 1.1E-5 T 15-10-2018 VIBNI_B1605 d41c26442c7e0db399c0ed53806b5110 302 PRINTS PR00313 NodO calcium binding signature 134 142 1.1E-5 T 15-10-2018 VIBNI_B1605 d41c26442c7e0db399c0ed53806b5110 302 PRINTS PR00313 NodO calcium binding signature 158 166 1.1E-5 T 15-10-2018 VIBNI_B1605 d41c26442c7e0db399c0ed53806b5110 302 PRINTS PR00313 NodO calcium binding signature 184 193 1.1E-5 T 15-10-2018 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 Pfam PF02502 Ribose/Galactose Isomerase 6 143 7.9E-50 T 15-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 148 1.3E-45 T 15-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 PIRSF PIRSF005384 4 150 2.0E-51 T 15-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 Gene3D G3DSA:3.40.1400.10 1 151 2.2E-53 T 15-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 SUPERFAMILY SSF89623 5 147 1.83E-51 T 15-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VIBNI_A0466 7e16cd842ac277571bf1489921e8c302 154 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 144 7.4E-46 T 15-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 VIBNI_A0843 4fe42782e4703181f11a07584b20fab3 276 Pfam PF11207 Protein of unknown function (DUF2989) 16 217 1.9E-67 T 15-10-2018 IPR021372 Protein of unknown function DUF2989 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.3E-32 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.767 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 SUPERFAMILY SSF46992 3 86 1.07E-32 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-27 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 5.0E-29 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0356 1667403c28b210815609d5daf3d8c3fb 86 Gene3D G3DSA:1.20.58.110 1 86 1.5E-30 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 SMART SM00450 113 214 3.4E-21 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 SUPERFAMILY SSF52821 94 241 7.82E-32 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.327 T 15-10-2018 IPR020936 Uncharacterised protein family UPF0176 VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 Gene3D G3DSA:3.40.250.10 97 252 1.3E-51 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 Pfam PF00581 Rhodanese-like domain 116 210 6.4E-8 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_B1524 2458621003b37edd4280765c2b1d94ff 326 Gene3D G3DSA:3.30.70.100 1 96 1.5E-33 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 SMART SM00174 6 165 0.0025 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 SMART SM00175 5 165 3.9E-13 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 Pfam PF00071 Ras family 5 162 2.0E-33 T 15-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 SUPERFAMILY SSF52540 3 164 4.91E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 SMART SM00173 1 164 4.7E-10 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 PRINTS PR00449 Transforming protein P21 ras signature 45 67 1.6E-23 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 PRINTS PR00449 Transforming protein P21 ras signature 27 43 1.6E-23 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 PRINTS PR00449 Transforming protein P21 ras signature 140 162 1.6E-23 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 PRINTS PR00449 Transforming protein P21 ras signature 106 119 1.6E-23 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 PRINTS PR00449 Transforming protein P21 ras signature 4 25 1.6E-23 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 Gene3D G3DSA:3.40.50.300 2 166 1.7E-44 T 15-10-2018 VIBNI_B1368 6f645b1968ac283e3be39cd5bae72594 166 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 158 4.5E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VIBNI_A0144 34aefb298be656fdf69028ac7ae7ca92 353 Pfam PF05816 Toxic anion resistance protein (TelA) 21 348 8.9E-78 T 15-10-2018 IPR008863 Toxic anion resistance VIBNI_A0144 34aefb298be656fdf69028ac7ae7ca92 353 PIRSF PIRSF026508 1 353 1.1E-70 T 15-10-2018 IPR008863 Toxic anion resistance VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 SUPERFAMILY SSF52833 29 142 9.36E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 PIRSF PIRSF000077 25 33 3100.0 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 PIRSF PIRSF000077 39 142 3.3E-31 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 Gene3D G3DSA:3.40.30.10 41 143 1.6E-32 T 15-10-2018 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.4E-7 T 15-10-2018 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.4E-7 T 15-10-2018 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.4E-7 T 15-10-2018 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 141 2.8E-34 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 Gene3D G3DSA:2.20.28.140 2 37 3.2E-14 T 15-10-2018 VIBNI_B1110 76a7ffaa4d40f7d80816fc3e5b2e5492 144 Pfam PF00085 Thioredoxin 45 140 1.6E-27 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 VIBNI_B1612 0e6298a50a32aaff6e6fcb8db734822f 299 Gene3D G3DSA:3.90.550.10 1 207 2.7E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1612 0e6298a50a32aaff6e6fcb8db734822f 299 SUPERFAMILY SSF53448 2 252 1.74E-37 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1612 0e6298a50a32aaff6e6fcb8db734822f 299 Pfam PF00535 Glycosyl transferase family 2 4 164 2.2E-21 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A1297 59cb049f25de8440dd4228517f9ed51d 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.6E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1297 59cb049f25de8440dd4228517f9ed51d 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.0E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1297 59cb049f25de8440dd4228517f9ed51d 176 SUPERFAMILY SSF54523 7 55 4.32E-11 T 15-10-2018 VIBNI_A1297 59cb049f25de8440dd4228517f9ed51d 176 Gene3D G3DSA:3.30.700.10 7 176 1.5E-10 T 15-10-2018 VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 Gene3D G3DSA:3.30.70.360 203 337 2.3E-98 T 15-10-2018 VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 Gene3D G3DSA:3.40.630.10 23 411 2.3E-98 T 15-10-2018 VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 SUPERFAMILY SSF55031 202 335 1.5E-11 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 Pfam PF07687 Peptidase dimerisation domain 199 321 8.9E-21 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 SUPERFAMILY SSF53187 7 423 5.71E-68 T 15-10-2018 VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 Pfam PF01546 Peptidase family M20/M25/M40 93 416 6.4E-41 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A0966 7e832f8a960fee1627d1719e19a07de5 434 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 414 7.2E-87 T 15-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase VIBNI_B0170 1d635bcc9eae6760b6de8726cac65865 111 Gene3D G3DSA:2.102.10.10 1 110 1.4E-32 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_B0170 1d635bcc9eae6760b6de8726cac65865 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 106 3.7E-32 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VIBNI_B0170 1d635bcc9eae6760b6de8726cac65865 111 SUPERFAMILY SSF50022 2 106 1.96E-30 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_B0170 1d635bcc9eae6760b6de8726cac65865 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 106 1.6E-34 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VIBNI_B1654 03403b5a87e0380797ee249690d8572e 197 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 30 173 6.3E-49 T 15-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1654 03403b5a87e0380797ee249690d8572e 197 Gene3D G3DSA:2.60.370.10 55 191 2.7E-43 T 15-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1654 03403b5a87e0380797ee249690d8572e 197 PIRSF PIRSF005413 1 191 2.3E-66 T 15-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1654 03403b5a87e0380797ee249690d8572e 197 SUPERFAMILY SSF110111 56 176 1.44E-46 T 15-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 SMART SM01390 3 95 6.8E-50 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 Gene3D G3DSA:3.10.290.10 103 191 2.4E-36 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.335 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 SMART SM00363 96 160 1.4E-20 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 SUPERFAMILY SSF55174 3 206 1.02E-72 T 15-10-2018 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 15-10-2018 VIBNI_A3154 3ddc70b816cf8dcd922c58b2a4869764 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.9E-85 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 Gene3D G3DSA:1.10.10.10 3 90 4.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 SUPERFAMILY SSF53850 90 295 1.14E-36 T 15-10-2018 VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 Gene3D G3DSA:3.40.190.290 92 294 2.0E-48 T 15-10-2018 VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 SUPERFAMILY SSF46785 3 113 9.8E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.4E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3571 e1446b09901332329b8390ba481898a9 297 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-34 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 323 1.1E-17 T 15-10-2018 IPR001543 Surface presentation of antigen (SpoA) VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 SUPERFAMILY SSF101801 251 327 2.49E-14 T 15-10-2018 IPR036429 SpoA-like superfamily VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 Pfam PF02154 Flagellar motor switch protein FliM 41 233 5.3E-82 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 Gene3D G3DSA:3.40.1550.10 47 234 1.3E-55 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 PIRSF PIRSF002888 1 332 1.1E-92 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 SUPERFAMILY SSF103039 5 234 2.27E-21 T 15-10-2018 IPR028976 CheC-like superfamily VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.1E-18 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 117 136 1.1E-18 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 92 108 1.1E-18 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 215 233 1.1E-18 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_A0730 f2af6ea8d694fa4aa63fd6e4b6a98546 359 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 323 1.3E-121 T 15-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VIBNI_B0773 cbd708508f02e688cafc7dcecf6688de 182 Gene3D G3DSA:1.10.1760.20 1 177 3.7E-19 T 15-10-2018 VIBNI_B0773 cbd708508f02e688cafc7dcecf6688de 182 Hamap MF_01572 UPF0397 protein . 1 182 20.723 T 15-10-2018 IPR022914 Protein of unknown function UPF0397 VIBNI_B0773 cbd708508f02e688cafc7dcecf6688de 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 4.3E-42 T 15-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Pfam PF08402 TOBE domain 252 319 7.2E-12 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Gene3D G3DSA:2.40.50.940 222 246 3.0E-9 T 15-10-2018 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 SUPERFAMILY SSF50331 236 327 5.1E-17 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Gene3D G3DSA:2.40.50.140 258 311 1.3E-6 T 15-10-2018 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Gene3D G3DSA:2.40.50.940 247 320 1.3E-6 T 15-10-2018 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Pfam PF00005 ABC transporter 19 161 1.6E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 SMART SM00382 28 211 4.7E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 SUPERFAMILY SSF52540 4 244 1.82E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1012 b8cb92afa9e14e192064021ab7774db9 338 Gene3D G3DSA:3.40.50.300 3 221 1.4E-70 T 15-10-2018 VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 49 676 1.9E-72 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 SUPERFAMILY SSF56935 28 676 1.4E-87 T 15-10-2018 VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 Gene3D G3DSA:2.40.170.20 152 676 2.7E-92 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 Pfam PF00593 TonB dependent receptor 229 674 3.4E-39 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 144 1.5E-14 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 Gene3D G3DSA:2.170.130.10 44 150 4.2E-33 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_B1157 a1eb2cd43288ed95616fb506957821bc 676 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 659 676 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.004 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 Gene3D G3DSA:3.20.20.20 1 261 3.6E-104 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 Pfam PF04551 GcpE protein 13 354 1.9E-132 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 SUPERFAMILY SSF51717 16 208 1.8E-10 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 SUPERFAMILY SSF56014 265 354 2.07E-11 T 15-10-2018 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 Gene3D G3DSA:3.30.413.10 262 361 3.7E-25 T 15-10-2018 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 PIRSF PIRSF004640 1 364 1.9E-147 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VIBNI_A2775 a713f9cc0fa44377d6c10b2584908ca1 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 3.6E-127 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VIBNI_B1735 2ec260812b722c2a03438fa966847dd0 288 SUPERFAMILY SSF161098 19 288 1.4E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1735 2ec260812b722c2a03438fa966847dd0 288 Gene3D G3DSA:1.10.3720.10 11 279 2.2E-56 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1735 2ec260812b722c2a03438fa966847dd0 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 272 6.6E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0126 0ff07af060d8509777786acfb00ed30c 581 SUPERFAMILY SSF48371 358 505 3.17E-6 T 15-10-2018 IPR016024 Armadillo-type fold VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Pfam PF01565 FAD binding domain 23 144 8.4E-16 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 SUPERFAMILY SSF56176 8 201 1.31E-37 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 81.793 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Gene3D G3DSA:3.30.43.10 1 72 8.0E-19 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Gene3D G3DSA:3.90.78.10 223 347 5.6E-44 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Gene3D G3DSA:3.30.465.10 73 222 2.2E-54 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 1.3E-91 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 3.2E-33 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A3337 f08b7fe1d8ae6aab563d7227c607ab2a 350 SUPERFAMILY SSF56194 206 343 4.32E-47 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 476 65.745 T 15-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 422 471 3.4E-10 T 15-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 SUPERFAMILY SSF53335 5 311 2.63E-65 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 90 104 5.8E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 256 5.8E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 123 133 5.8E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 190 202 5.8E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 294 311 5.8E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 311 5.0E-99 T 15-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 104 6.7E-29 T 15-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 310 4.2E-49 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 189 200 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Gene3D G3DSA:3.40.50.150 2 311 2.9E-99 T 15-10-2018 VIBNI_A1798 2d4cd9dd1131be5192aa10c4a41281a6 476 Gene3D G3DSA:2.30.130.90 313 476 1.2E-66 T 15-10-2018 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 15-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 Gene3D G3DSA:1.10.287.310 1 63 1.3E-30 T 15-10-2018 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 SUPERFAMILY SSF46561 1 61 3.79E-23 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.944 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-24 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3170 5932b3c85a4859cecc6d0c0a19d4b7fb 63 Pfam PF00831 Ribosomal L29 protein 5 60 3.2E-25 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A0689 fb549ae73540e5a4c1e27d90d40500b7 156 SUPERFAMILY SSF52833 4 154 4.29E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0689 fb549ae73540e5a4c1e27d90d40500b7 156 PIRSF PIRSF000239 1 147 1.7E-16 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_A0689 fb549ae73540e5a4c1e27d90d40500b7 156 Gene3D G3DSA:3.40.30.10 3 155 7.5E-46 T 15-10-2018 VIBNI_A0689 fb549ae73540e5a4c1e27d90d40500b7 156 Pfam PF00578 AhpC/TSA family 7 134 1.1E-34 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_B2113 da928828f56fedb9edd1b072f81f014e 258 Gene3D G3DSA:3.40.50.1820 9 247 6.8E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B2113 da928828f56fedb9edd1b072f81f014e 258 SUPERFAMILY SSF53474 11 243 1.07E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0854 56b55a7a291d7659762ce54716278f06 297 Pfam PF13468 Glyoxalase-like domain 8 194 1.7E-30 T 15-10-2018 IPR025870 Glyoxalase-like domain VIBNI_A0854 56b55a7a291d7659762ce54716278f06 297 Gene3D G3DSA:3.10.180.10 6 148 6.7E-12 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0854 56b55a7a291d7659762ce54716278f06 297 SUPERFAMILY SSF54593 6 129 2.35E-8 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A3062 5a0dcb550739370a16d59781b9493ca8 115 SUPERFAMILY SSF110857 4 114 3.4E-31 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VIBNI_A3062 5a0dcb550739370a16d59781b9493ca8 115 Gene3D G3DSA:3.10.490.10 4 115 8.0E-40 T 15-10-2018 VIBNI_A3062 5a0dcb550739370a16d59781b9493ca8 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.2E-25 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 Gene3D G3DSA:2.60.120.520 30 144 3.4E-121 T 15-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.844 T 15-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 Gene3D G3DSA:2.60.120.10 10 264 3.4E-121 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 PIRSF PIRSF006625 1 278 3.6E-136 T 15-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 SUPERFAMILY SSF51182 1 262 1.72E-106 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0647 4b2c4023996e6c577e928bd8141953ac 278 Pfam PF04962 KduI/IolB family 71 272 1.4E-33 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 Pfam PF00107 Zinc-binding dehydrogenase 139 252 1.9E-9 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 SUPERFAMILY SSF51735 113 246 2.48E-20 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 SUPERFAMILY SSF50129 3 138 3.49E-16 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 Gene3D G3DSA:3.90.180.10 1 85 3.6E-6 T 15-10-2018 VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 Gene3D G3DSA:3.40.50.720 116 238 2.0E-25 T 15-10-2018 VIBNI_B0412 dcf67066e809dd0d46a7c47863f593ae 328 Gene3D G3DSA:3.90.180.10 88 115 2.0E-25 T 15-10-2018 VIBNI_A2895 11c4dc34854cf249eb01361625d3f543 350 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 312 5.1E-97 T 15-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VIBNI_A2895 11c4dc34854cf249eb01361625d3f543 350 Pfam PF13528 Glycosyl transferase family 1 1 301 2.7E-41 T 15-10-2018 VIBNI_A2895 11c4dc34854cf249eb01361625d3f543 350 SUPERFAMILY SSF53756 8 292 7.42E-11 T 15-10-2018 VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 SMART SM00421 196 253 1.8E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 Pfam PF00196 Bacterial regulatory proteins, luxR family 198 251 7.0E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 Gene3D G3DSA:1.10.10.10 177 258 1.6E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 229 2.0E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 229 241 2.0E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0076 7b929e4b444fa1c5e1e3729791a10771 263 SUPERFAMILY SSF46894 190 254 2.69E-14 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2101 92ebbcc05e2f951edaec818f1f0187a5 387 Gene3D G3DSA:3.60.70.12 16 383 6.2E-129 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 VIBNI_A2101 92ebbcc05e2f951edaec818f1f0187a5 387 Pfam PF03576 Peptidase family S58 34 355 6.9E-101 T 15-10-2018 IPR005321 Peptidase S58, DmpA VIBNI_A2101 92ebbcc05e2f951edaec818f1f0187a5 387 SUPERFAMILY SSF56266 17 382 2.01E-98 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 VIBNI_A1022 ced9d1adf56722db07107bec948cd32a 381 Gene3D G3DSA:3.40.50.2000 183 364 2.9E-50 T 15-10-2018 VIBNI_A1022 ced9d1adf56722db07107bec948cd32a 381 Pfam PF00534 Glycosyl transferases group 1 195 359 2.5E-29 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1022 ced9d1adf56722db07107bec948cd32a 381 SUPERFAMILY SSF53756 16 379 1.26E-62 T 15-10-2018 VIBNI_A1022 ced9d1adf56722db07107bec948cd32a 381 Gene3D G3DSA:3.40.50.2000 19 373 2.9E-50 T 15-10-2018 VIBNI_A1022 ced9d1adf56722db07107bec948cd32a 381 Pfam PF13439 Glycosyltransferase Family 4 18 187 7.6E-7 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 SMART SM00421 836 893 6.5E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 Gene3D G3DSA:1.25.40.10 445 811 5.6E-78 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 3.1E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 Gene3D G3DSA:1.10.10.10 826 895 3.3E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 SUPERFAMILY SSF48452 443 805 1.5E-139 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 SUPERFAMILY SSF52540 7 270 9.11E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.4E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 Gene3D G3DSA:3.40.50.300 6 163 1.2E-7 T 15-10-2018 VIBNI_B1563 3bf243d5786772c0486c3211c89b335c 903 SUPERFAMILY SSF46894 831 893 4.08E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A3802 ce4e6db468e2bfc936c1aab34f73dd9e 213 PIRSF PIRSF006324 1 212 1.6E-49 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3802 ce4e6db468e2bfc936c1aab34f73dd9e 213 Pfam PF01810 LysE type translocator 16 211 1.7E-38 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3805 751d89c9b18928b88c49e655ef1a5315 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.1E-23 T 15-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VIBNI_A2897 9fb1a5f56f56ad997605dbfe072e1592 346 SUPERFAMILY SSF56935 37 346 9.77E-28 T 15-10-2018 VIBNI_A2897 9fb1a5f56f56ad997605dbfe072e1592 346 Gene3D G3DSA:2.40.160.10 30 346 5.4E-28 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_A2897 9fb1a5f56f56ad997605dbfe072e1592 346 Pfam PF13609 Gram-negative porin 16 325 2.0E-12 T 15-10-2018 VIBNI_B1087 70a42c44a9d8a7ac9bad909237f174a5 259 Pfam PF01435 Peptidase family M48 71 244 3.9E-42 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VIBNI_B1087 70a42c44a9d8a7ac9bad909237f174a5 259 Gene3D G3DSA:3.30.2010.10 53 137 8.6E-8 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 SUPERFAMILY SSF103491 15 427 5.62E-131 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 ProSitePatterns PS00756 Protein secY signature 2. 172 189 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 179 202 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 271 290 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 373 391 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 153 178 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 318 340 1.6E-95 T 15-10-2018 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 432 1.6E-133 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 436 29.203 T 15-10-2018 IPR026593 Protein translocase subunit SecY VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 Pfam PF00344 SecY translocase 76 420 8.8E-118 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 PIRSF PIRSF004557 11 444 3.7E-121 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A3158 b00ed22a1351fb4754dbca60e9fbe497 446 Gene3D G3DSA:1.10.3370.10 11 432 1.4E-160 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VIBNI_A1999 311ea5f1cb3be18504b713d5848edc82 211 SUPERFAMILY SSF56399 78 175 1.96E-6 T 15-10-2018 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 PIRSF PIRSF001492 1 512 2.1E-203 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 SUPERFAMILY SSF64158 78 308 4.05E-80 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.561 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 Gene3D G3DSA:3.40.720.10 6 507 1.1E-209 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.3E-79 T 15-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 Gene3D G3DSA:3.40.1450.10 78 310 1.1E-209 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.9E-227 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 SUPERFAMILY SSF53649 5 509 6.02E-74 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_A3631 a2c2d7e09cf6d0ca0b3874c2c67383eb 512 Pfam PF01676 Metalloenzyme superfamily 5 497 1.7E-81 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 SUPERFAMILY SSF52540 3 232 1.02E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 4 211 9.6E-98 T 15-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 Pfam PF00005 ABC transporter 20 159 3.0E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 SMART SM00382 26 216 5.8E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 Gene3D G3DSA:3.40.50.300 1 236 1.5E-62 T 15-10-2018 VIBNI_A3055 8f376ba2faebc3cfd250192c2c5b1b9e 236 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2030 dcba775a696f382fa5af6ecef774030a 298 Pfam PF07285 Protein of unknown function (DUF1444) 28 292 1.5E-9 T 15-10-2018 IPR010838 Protein of unknown unction DUF1444 VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 SMART SM00530 31 86 1.4E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 Gene3D G3DSA:2.60.120.10 94 205 2.1E-24 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 Pfam PF07883 Cupin domain 147 204 2.0E-11 T 15-10-2018 IPR013096 Cupin 2, conserved barrel VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 Gene3D G3DSA:1.10.260.40 26 93 1.6E-16 T 15-10-2018 VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 SUPERFAMILY SSF51182 97 204 1.4E-25 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 Pfam PF01381 Helix-turn-helix 32 84 6.0E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B0817 df3712d7d46f3c67a95290c276175871 207 SUPERFAMILY SSF47413 26 90 4.02E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2380 4fd8185c0cdf613039c205b79a2413cd 278 Pfam PF01925 Sulfite exporter TauE/SafE 21 270 7.0E-36 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A2592 164c8ad192ded583f584b5acba6b1906 218 Gene3D G3DSA:3.40.225.10 7 217 2.7E-71 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_A2592 164c8ad192ded583f584b5acba6b1906 218 SMART SM01007 14 188 1.9E-64 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_A2592 164c8ad192ded583f584b5acba6b1906 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 188 6.6E-45 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_A2592 164c8ad192ded583f584b5acba6b1906 218 SUPERFAMILY SSF53639 4 216 1.47E-61 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 Pfam PF00672 HAMP domain 252 298 6.2E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 545 1.1E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 SMART SM00283 317 578 6.8E-66 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 SMART SM00304 248 302 1.9E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 341 370 5.4E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 442 5.4E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 5.4E-19 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 Gene3D G3DSA:1.10.287.950 250 580 9.7E-70 T 15-10-2018 VIBNI_A1469 e4431051e872921f2736cae1545fe580 580 SUPERFAMILY SSF58104 270 579 1.44E-73 T 15-10-2018 VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 Pfam PF04055 Radical SAM superfamily 11 183 5.4E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 5.0E-134 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 Gene3D G3DSA:3.80.30.20 2 306 1.1E-93 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 SUPERFAMILY SSF102114 5 386 6.02E-109 T 15-10-2018 VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 SMART SM00729 6 227 1.3E-53 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A0049 9567897981b8641756dd06829acf1dcd 391 Pfam PF06969 HemN C-terminal domain 314 374 1.5E-9 T 15-10-2018 IPR010723 HemN, C-terminal VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 SMART SM00490 270 351 2.0E-31 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 Gene3D G3DSA:3.40.50.300 229 389 1.8E-45 T 15-10-2018 VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.1E-45 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 Pfam PF00271 Helicase conserved C-terminal domain 244 351 3.1E-29 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.332 T 15-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 SMART SM00487 28 234 3.6E-56 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 SUPERFAMILY SSF52540 85 363 3.14E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3787 7dd562e12178c335bfb1884dac444d26 431 Gene3D G3DSA:3.40.50.300 2 222 7.8E-73 T 15-10-2018 VIBNI_B1014 355fcde53d7d01e0e7f0a7998d210b79 161 Gene3D G3DSA:2.60.120.10 2 147 2.7E-42 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1014 355fcde53d7d01e0e7f0a7998d210b79 161 SUPERFAMILY SSF51182 11 152 1.72E-28 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1014 355fcde53d7d01e0e7f0a7998d210b79 161 Pfam PF07883 Cupin domain 47 117 7.1E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 SUPERFAMILY SSF54862 450 549 9.48E-26 T 15-10-2018 VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 Gene3D G3DSA:3.30.9.90 79 450 1.6E-184 T 15-10-2018 VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 8.7E-7 T 15-10-2018 VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 Gene3D G3DSA:3.30.70.20 451 544 5.5E-36 T 15-10-2018 VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 Gene3D G3DSA:3.50.50.60 8 386 1.6E-184 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 SUPERFAMILY SSF51905 2 448 9.86E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 547 3.7E-46 T 15-10-2018 VIBNI_A0956 4bed1fdd2dd11a1ca7083815f748f29e 549 SUPERFAMILY SSF54373 211 306 3.41E-33 T 15-10-2018 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 SUPERFAMILY SSF53850 87 282 3.26E-22 T 15-10-2018 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 Gene3D G3DSA:3.40.190.10 161 251 3.9E-21 T 15-10-2018 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 Gene3D G3DSA:1.10.10.10 6 94 4.0E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 Pfam PF03466 LysR substrate binding domain 87 280 5.5E-17 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.9E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 Gene3D G3DSA:3.40.190.10 97 276 3.9E-21 T 15-10-2018 VIBNI_B0052 5e24f3e73bbabe692bd0d9da627d9a8f 284 SUPERFAMILY SSF46785 3 83 2.48E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2862 da3acd4bd8a0a404e90c1a96ef3690f3 164 SUPERFAMILY SSF55083 1 148 1.83E-37 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2862 da3acd4bd8a0a404e90c1a96ef3690f3 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 128 2.2E-29 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2862 da3acd4bd8a0a404e90c1a96ef3690f3 164 Gene3D G3DSA:3.30.70.560 2 152 1.7E-34 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2862 da3acd4bd8a0a404e90c1a96ef3690f3 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 128 1.2E-25 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_B1179 f1775034fea5729d85909db70dd5c084 486 SUPERFAMILY SSF51905 10 298 3.03E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1179 f1775034fea5729d85909db70dd5c084 486 Pfam PF13450 NAD(P)-binding Rossmann-like domain 16 46 1.5E-6 T 15-10-2018 VIBNI_B1179 f1775034fea5729d85909db70dd5c084 486 Gene3D G3DSA:3.50.50.60 9 104 8.5E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0075 4dce6fdf765c374400c28a7ab105fa8a 219 Gene3D G3DSA:3.40.50.10230 2 219 5.5E-84 T 15-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 VIBNI_A0075 4dce6fdf765c374400c28a7ab105fa8a 219 Pfam PF02570 Precorrin-8X methylmutase 14 215 4.9E-75 T 15-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 VIBNI_A0075 4dce6fdf765c374400c28a7ab105fa8a 219 SUPERFAMILY SSF63965 14 215 2.09E-67 T 15-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 VIBNI_A2587 0ba8b3c609027c504e2741c7a65161a6 316 SUPERFAMILY SSF53613 1 301 7.64E-67 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2587 0ba8b3c609027c504e2741c7a65161a6 316 Pfam PF00294 pfkB family carbohydrate kinase 32 289 4.5E-50 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_A2587 0ba8b3c609027c504e2741c7a65161a6 316 Gene3D G3DSA:3.40.1190.20 1 316 5.0E-71 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0836 9525c9b09a0e9a10300c89183db1d956 333 PIRSF PIRSF028696 4 333 3.2E-93 T 15-10-2018 IPR016896 Protein of unknown function DUF2860 VIBNI_A0836 9525c9b09a0e9a10300c89183db1d956 333 Pfam PF11059 Protein of unknown function (DUF2860) 31 331 1.2E-83 T 15-10-2018 IPR016896 Protein of unknown function DUF2860 VIBNI_B0223 be13b1ce8ccbe7902f7cc307c79236c1 334 Pfam PF07366 SnoaL-like polyketide cyclase 275 317 4.2E-7 T 15-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VIBNI_B0223 be13b1ce8ccbe7902f7cc307c79236c1 334 Gene3D G3DSA:3.10.450.50 1 152 2.1E-17 T 15-10-2018 VIBNI_B0223 be13b1ce8ccbe7902f7cc307c79236c1 334 Gene3D G3DSA:3.10.450.50 198 328 8.9E-21 T 15-10-2018 VIBNI_B0223 be13b1ce8ccbe7902f7cc307c79236c1 334 SUPERFAMILY SSF54427 201 327 7.94E-24 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0223 be13b1ce8ccbe7902f7cc307c79236c1 334 SUPERFAMILY SSF54427 6 155 6.75E-21 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A2286 dcb4e6e3283cfb650c1f8aad036315bd 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.905 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VIBNI_A2286 dcb4e6e3283cfb650c1f8aad036315bd 257 Gene3D G3DSA:3.20.20.70 1 257 5.0E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2286 dcb4e6e3283cfb650c1f8aad036315bd 257 Pfam PF00977 Histidine biosynthesis protein 5 239 5.7E-79 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VIBNI_A2286 dcb4e6e3283cfb650c1f8aad036315bd 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 2.6E-114 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VIBNI_A2286 dcb4e6e3283cfb650c1f8aad036315bd 257 SUPERFAMILY SSF51366 1 256 7.54E-75 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A2451 da724f7a861c2d0601e7d96163cf3db2 573 Gene3D G3DSA:1.10.287.950 249 573 3.1E-62 T 15-10-2018 VIBNI_A2451 da724f7a861c2d0601e7d96163cf3db2 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 546 3.7E-43 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2451 da724f7a861c2d0601e7d96163cf3db2 573 SMART SM00283 310 571 1.2E-52 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2451 da724f7a861c2d0601e7d96163cf3db2 573 SMART SM00304 249 302 1.0E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2451 da724f7a861c2d0601e7d96163cf3db2 573 SUPERFAMILY SSF58104 270 572 1.16E-64 T 15-10-2018 VIBNI_A3498 35eaf7812d9be4d75a901334764ec067 83 Pfam PF04380 Membrane fusogenic activity 1 78 9.1E-28 T 15-10-2018 IPR007475 Membrane fusogenic activity VIBNI_A1917 5088aae1caf208338b1a38360b817444 378 Pfam PF13432 Tetratricopeptide repeat 126 187 5.9E-7 T 15-10-2018 VIBNI_A1917 5088aae1caf208338b1a38360b817444 378 Gene3D G3DSA:1.25.40.10 12 235 5.1E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1917 5088aae1caf208338b1a38360b817444 378 SUPERFAMILY SSF48452 57 212 3.45E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 PIRSF PIRSF000089 1 310 9.0E-99 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 Gene3D G3DSA:3.40.50.620 3 179 2.4E-41 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 SUPERFAMILY SSF52402 3 180 9.21E-40 T 15-10-2018 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 SUPERFAMILY SSF52467 184 306 4.03E-44 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 Pfam PF01012 Electron transfer flavoprotein domain 5 166 1.8E-26 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 SMART SM00893 3 179 4.0E-27 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 187 270 5.6E-32 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VIBNI_B0455 a6bac38d826c3309e7f7a18b6f1f5f88 310 Gene3D G3DSA:3.40.50.1220 181 310 1.8E-53 T 15-10-2018 VIBNI_A2493 4601d6b40e97ae04ffb1c78c225a2955 150 Pfam PF07977 FabA-like domain 17 141 2.5E-40 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A2493 4601d6b40e97ae04ffb1c78c225a2955 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.367 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A2493 4601d6b40e97ae04ffb1c78c225a2955 150 Gene3D G3DSA:3.10.129.10 2 150 3.6E-61 T 15-10-2018 VIBNI_A2493 4601d6b40e97ae04ffb1c78c225a2955 150 SUPERFAMILY SSF54637 7 146 8.55E-50 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A2493 4601d6b40e97ae04ffb1c78c225a2955 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.7E-59 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_B0098 95f55f10a087d169399f5dc48da181c7 244 SMART SM00530 10 65 0.0016 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B0098 95f55f10a087d169399f5dc48da181c7 244 SUPERFAMILY SSF47413 6 74 2.38E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0098 95f55f10a087d169399f5dc48da181c7 244 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 67 3.1E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B0098 95f55f10a087d169399f5dc48da181c7 244 Gene3D G3DSA:1.10.260.40 3 68 9.1E-6 T 15-10-2018 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 SUPERFAMILY SSF101904 532 851 2.49E-114 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Gene3D G3DSA:3.90.199.10 33 520 1.8E-236 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Gene3D G3DSA:3.30.1360.40 236 332 1.8E-236 T 15-10-2018 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 SMART SM00434 11 498 1.5E-302 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 SUPERFAMILY SSF56719 30 520 3.27E-188 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.9E-12 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 785 9.5E-13 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.1E-7 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 1.1E-11 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 4.0E-15 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 6.3E-9 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.648 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Gene3D G3DSA:1.10.268.10 369 492 1.8E-236 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 15-10-2018 VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Gene3D G3DSA:2.120.10.90 534 840 5.1E-128 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VIBNI_A2050 f61cd49775b2d734b094612397310a3d 871 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.6E-158 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 SUPERFAMILY SSF46689 436 486 7.17E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 SMART SM00382 184 327 1.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Gene3D G3DSA:1.10.10.60 440 485 1.4E-15 T 15-10-2018 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 SUPERFAMILY SSF52540 163 393 8.74E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Pfam PF00158 Sigma-54 interaction domain 164 329 5.9E-67 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 SUPERFAMILY SSF52172 25 208 7.4E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Gene3D G3DSA:3.40.50.300 149 334 5.5E-63 T 15-10-2018 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Gene3D G3DSA:3.40.50.2300 26 143 7.4E-31 T 15-10-2018 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Pfam PF00072 Response regulator receiver domain 27 136 3.0E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 376 385 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 SMART SM00448 25 136 2.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Gene3D G3DSA:1.10.8.60 335 416 5.4E-16 T 15-10-2018 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 188 201 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 489 7.7E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 469 7.7E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 249 264 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VIBNI_A1677 aed32571a8fe9edb1b44915fa467d60b 495 Pfam PF02954 Bacterial regulatory protein, Fis family 445 486 9.2E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VIBNI_A1508 41a8e8c1caa1350f5425e4539936c449 381 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 208 356 2.1E-7 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_A1508 41a8e8c1caa1350f5425e4539936c449 381 SUPERFAMILY SSF56529 152 361 3.66E-26 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A1508 41a8e8c1caa1350f5425e4539936c449 381 Gene3D G3DSA:3.90.850.10 139 361 3.4E-41 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A3645 2473a949a60c5d1f6a7e2a5331145484 294 SUPERFAMILY SSF53448 1 288 1.51E-91 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3645 2473a949a60c5d1f6a7e2a5331145484 294 Gene3D G3DSA:3.90.550.10 1 293 5.8E-86 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3645 2473a949a60c5d1f6a7e2a5331145484 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 3.9E-153 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VIBNI_A3645 2473a949a60c5d1f6a7e2a5331145484 294 Pfam PF00483 Nucleotidyl transferase 2 240 1.9E-72 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 Pfam PF02780 Transketolase, C-terminal domain 195 317 8.9E-40 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 Gene3D G3DSA:3.40.50.970 4 193 2.0E-83 T 15-10-2018 VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 Pfam PF02779 Transketolase, pyrimidine binding domain 5 180 2.9E-47 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 SUPERFAMILY SSF52518 4 205 3.83E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 SMART SM00861 6 181 2.3E-61 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 SUPERFAMILY SSF52922 189 325 1.57E-40 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0479 6404e1a11a5973160f6a339b03fd3563 334 Gene3D G3DSA:3.40.50.920 194 327 1.4E-46 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A1232 c92d753dedc573bb22c2cdd3551145c8 402 Pfam PF07690 Major Facilitator Superfamily 16 346 1.0E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A1232 c92d753dedc573bb22c2cdd3551145c8 402 Gene3D G3DSA:1.20.1250.20 200 393 5.0E-24 T 15-10-2018 VIBNI_A1232 c92d753dedc573bb22c2cdd3551145c8 402 SUPERFAMILY SSF103473 6 392 2.22E-47 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A1232 c92d753dedc573bb22c2cdd3551145c8 402 Gene3D G3DSA:1.20.1250.20 6 195 1.6E-17 T 15-10-2018 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 SMART SM00344 3 112 3.7E-34 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 Gene3D G3DSA:3.30.70.920 56 153 4.2E-17 T 15-10-2018 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.6E-17 T 15-10-2018 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 SUPERFAMILY SSF54909 68 148 3.75E-14 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 SUPERFAMILY SSF46785 2 62 3.86E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.3E-16 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 Gene3D G3DSA:1.10.10.10 4 55 3.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.5E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.5E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1583 9497632f6ba920446f9df229c22f570b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.5E-16 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VIBNI_B1314 a1a9655dc2c1cddf86a0a7a5b76db055 140 Gene3D G3DSA:3.40.630.30 1 137 9.9E-39 T 15-10-2018 VIBNI_B1314 a1a9655dc2c1cddf86a0a7a5b76db055 140 Pfam PF00583 Acetyltransferase (GNAT) family 24 123 2.5E-20 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1314 a1a9655dc2c1cddf86a0a7a5b76db055 140 SUPERFAMILY SSF55729 1 131 4.58E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 5.8E-160 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 Pfam PF02595 Glycerate kinase family 3 373 3.4E-147 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 SUPERFAMILY SSF110738 1 375 3.4E-140 T 15-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 Gene3D G3DSA:3.40.50.10350 1 362 3.8E-138 T 15-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 Gene3D G3DSA:3.90.1510.10 42 276 3.8E-138 T 15-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VIBNI_A0525 1e21346b1838b747aae3ba644bb17874 379 PIRSF PIRSF006078 1 377 2.5E-136 T 15-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VIBNI_A2376 61f88d19bd21d44393ca575eab669886 318 SUPERFAMILY SSF53590 3 308 5.1E-87 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like VIBNI_A2376 61f88d19bd21d44393ca575eab669886 318 Gene3D G3DSA:3.90.245.10 1 313 5.7E-96 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like VIBNI_A2376 61f88d19bd21d44393ca575eab669886 318 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 303 1.9E-76 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain VIBNI_A1584 7d74befde2b3dab19ab9e8cef2a27c74 218 SUPERFAMILY SSF57783 172 212 8.5E-7 T 15-10-2018 VIBNI_A1584 7d74befde2b3dab19ab9e8cef2a27c74 218 Pfam PF10881 Protein of unknown function (DUF2726) 38 159 1.3E-30 T 15-10-2018 IPR024402 Domain of unknown function DUF2726 VIBNI_A1584 7d74befde2b3dab19ab9e8cef2a27c74 218 Gene3D G3DSA:3.30.65.10 161 217 9.2E-6 T 15-10-2018 VIBNI_A1584 7d74befde2b3dab19ab9e8cef2a27c74 218 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 173 209 1.8E-8 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VIBNI_A1584 7d74befde2b3dab19ab9e8cef2a27c74 218 PIRSF PIRSF028063 1 216 4.6E-80 T 15-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VIBNI_A1208 ed510a7fec6f3345cb57751d0ccc43d8 288 SUPERFAMILY SSF56529 65 280 6.28E-84 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A1208 ed510a7fec6f3345cb57751d0ccc43d8 288 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 75 277 3.8E-70 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_A1208 ed510a7fec6f3345cb57751d0ccc43d8 288 Gene3D G3DSA:3.90.850.10 70 287 3.5E-88 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A0262 2abbb46c9f70a44956ed49ce5fc53fe7 186 Pfam PF03358 NADPH-dependent FMN reductase 13 129 5.1E-14 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VIBNI_A0262 2abbb46c9f70a44956ed49ce5fc53fe7 186 SUPERFAMILY SSF52218 3 184 1.7E-43 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0262 2abbb46c9f70a44956ed49ce5fc53fe7 186 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VIBNI_A0262 2abbb46c9f70a44956ed49ce5fc53fe7 186 Gene3D G3DSA:3.40.50.360 1 186 1.5E-50 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B1730 15182f0e42f3c11293d0f54f996d8b81 753 SUPERFAMILY SSF49785 575 703 1.36E-10 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1730 15182f0e42f3c11293d0f54f996d8b81 753 Pfam PF01483 Proprotein convertase P-domain 621 703 1.2E-10 T 15-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VIBNI_B1730 15182f0e42f3c11293d0f54f996d8b81 753 SUPERFAMILY SSF55486 207 478 3.26E-33 T 15-10-2018 VIBNI_B1730 15182f0e42f3c11293d0f54f996d8b81 753 Gene3D G3DSA:2.60.120.260 581 734 1.7E-7 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B2066 ab634cbca32ec0f5f92439f1f112ad9c 327 Gene3D G3DSA:3.40.190.170 29 327 2.6E-105 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B2066 ab634cbca32ec0f5f92439f1f112ad9c 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 286 6.5E-79 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_B2066 ab634cbca32ec0f5f92439f1f112ad9c 327 SUPERFAMILY SSF53850 133 278 8.31E-9 T 15-10-2018 VIBNI_B2066 ab634cbca32ec0f5f92439f1f112ad9c 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 310 1.1E-85 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B2066 ab634cbca32ec0f5f92439f1f112ad9c 327 PIRSF PIRSF006470 1 326 5.9E-92 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VIBNI_A2351 1dc3a4350edf066a803a7d48702e66e9 257 Pfam PF00005 ABC transporter 22 169 3.0E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2351 1dc3a4350edf066a803a7d48702e66e9 257 Gene3D G3DSA:3.40.50.300 1 256 4.6E-64 T 15-10-2018 VIBNI_A2351 1dc3a4350edf066a803a7d48702e66e9 257 SMART SM00382 30 217 1.5E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2351 1dc3a4350edf066a803a7d48702e66e9 257 SUPERFAMILY SSF52540 4 230 5.92E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1695 2389fba99a39e2d1c4c1720aae9e99ce 110 SUPERFAMILY SSF103481 11 107 1.44E-7 T 15-10-2018 VIBNI_A1695 2389fba99a39e2d1c4c1720aae9e99ce 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.89 T 15-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 VIBNI_A1695 2389fba99a39e2d1c4c1720aae9e99ce 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 109 4.0E-40 T 15-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 VIBNI_B0577 1ac7e0b231b914a8ef716b55b6e86518 336 SUPERFAMILY SSF53850 34 324 9.45E-61 T 15-10-2018 VIBNI_B0577 1ac7e0b231b914a8ef716b55b6e86518 336 Gene3D G3DSA:3.40.190.10 45 303 1.6E-56 T 15-10-2018 VIBNI_B0577 1ac7e0b231b914a8ef716b55b6e86518 336 Pfam PF13343 Bacterial extracellular solute-binding protein 76 300 9.7E-48 T 15-10-2018 VIBNI_B0577 1ac7e0b231b914a8ef716b55b6e86518 336 Gene3D G3DSA:3.40.190.10 128 307 1.6E-56 T 15-10-2018 VIBNI_A1491 3f965c96ddd468c475ff265dc7c6c6f0 248 SMART SM00062 24 246 6.1E-5 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A1491 3f965c96ddd468c475ff265dc7c6c6f0 248 Gene3D G3DSA:3.40.190.10 106 202 1.6E-34 T 15-10-2018 VIBNI_A1491 3f965c96ddd468c475ff265dc7c6c6f0 248 SUPERFAMILY SSF53850 27 243 1.18E-37 T 15-10-2018 VIBNI_A1491 3f965c96ddd468c475ff265dc7c6c6f0 248 Gene3D G3DSA:3.40.190.10 31 242 1.6E-34 T 15-10-2018 VIBNI_A1491 3f965c96ddd468c475ff265dc7c6c6f0 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 2.0E-28 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_B0355 b94a36ca31fcc7f7a5520eb4bbacfe3e 524 Gene3D G3DSA:3.20.20.450 269 521 9.3E-66 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0355 b94a36ca31fcc7f7a5520eb4bbacfe3e 524 Pfam PF00563 EAL domain 272 500 7.3E-53 T 15-10-2018 IPR001633 EAL domain VIBNI_B0355 b94a36ca31fcc7f7a5520eb4bbacfe3e 524 Pfam PF12792 CSS motif domain associated with EAL 42 178 1.4E-19 T 15-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VIBNI_B0355 b94a36ca31fcc7f7a5520eb4bbacfe3e 524 SMART SM00052 265 506 1.3E-54 T 15-10-2018 IPR001633 EAL domain VIBNI_B0355 b94a36ca31fcc7f7a5520eb4bbacfe3e 524 SUPERFAMILY SSF141868 272 513 2.22E-60 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 Pfam PF00929 Exonuclease 11 190 1.3E-23 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 SUPERFAMILY SSF53098 7 472 1.45E-134 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 PIRSF PIRSF000977 1 474 1.1E-195 T 15-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 Pfam PF08411 Exonuclease C-terminal 210 470 1.6E-101 T 15-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 Gene3D G3DSA:2.30.30.450 212 352 5.8E-54 T 15-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 Gene3D G3DSA:3.30.420.10 2 199 6.9E-72 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A1418 c7bb0bf2ce5367311481b19d2bbe6d54 474 Gene3D G3DSA:1.20.1280.70 359 419 3.9E-25 T 15-10-2018 VIBNI_A3131 4704e8117743d7d7c720fe9efb3d3c88 171 Pfam PF11736 Protein of unknown function (DUF3299) 37 166 9.7E-44 T 15-10-2018 IPR021727 Protein of unknown function DUF3299 VIBNI_A3131 4704e8117743d7d7c720fe9efb3d3c88 171 Gene3D G3DSA:2.40.50.870 30 171 1.2E-46 T 15-10-2018 VIBNI_A3816 c1374eb2e5112acdcc7675b46f5df5d0 257 SUPERFAMILY SSF69572 4 248 3.79E-77 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VIBNI_A3816 c1374eb2e5112acdcc7675b46f5df5d0 257 Pfam PF00899 ThiF family 12 244 5.9E-60 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VIBNI_A3816 c1374eb2e5112acdcc7675b46f5df5d0 257 Gene3D G3DSA:3.40.50.720 4 254 7.9E-89 T 15-10-2018 VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 Pfam PF01266 FAD dependent oxidoreductase 8 404 3.9E-66 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 8.6E-5 T 15-10-2018 VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 8.6E-5 T 15-10-2018 VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 Gene3D G3DSA:3.30.9.10 140 369 9.7E-45 T 15-10-2018 VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 SUPERFAMILY SSF51905 8 411 2.33E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 Gene3D G3DSA:3.50.50.60 4 66 8.1E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 Gene3D G3DSA:3.50.50.60 109 409 9.7E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0831 932920316bc2df11ae4bc21f7e038554 428 SUPERFAMILY SSF54373 277 366 1.44E-11 T 15-10-2018 VIBNI_B0396 8c5be2abdb1c55118db896864be1e5dc 217 Pfam PF00805 Pentapeptide repeats (8 copies) 23 48 0.0021 T 15-10-2018 IPR001646 Pentapeptide repeat VIBNI_B0396 8c5be2abdb1c55118db896864be1e5dc 217 Pfam PF13599 Pentapeptide repeats (9 copies) 89 171 2.8E-11 T 15-10-2018 IPR001646 Pentapeptide repeat VIBNI_B0396 8c5be2abdb1c55118db896864be1e5dc 217 SUPERFAMILY SSF141571 21 201 2.35E-39 T 15-10-2018 VIBNI_B0396 8c5be2abdb1c55118db896864be1e5dc 217 Gene3D G3DSA:2.160.20.80 3 217 5.6E-58 T 15-10-2018 VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 Pfam PF12840 Helix-turn-helix domain 10 69 3.0E-10 T 15-10-2018 VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 Gene3D G3DSA:1.10.10.10 2 98 7.8E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 SMART SM00418 8 89 1.4E-4 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 SUPERFAMILY SSF46785 1 93 3.98E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 7.5E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 7.5E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A2193 03ecf97314de79bec5933502b474d79f 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.5E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_A3000 b10ecc7c1d6248788507293d5438b1db 281 Gene3D G3DSA:3.40.50.300 28 183 2.2E-13 T 15-10-2018 VIBNI_A3000 b10ecc7c1d6248788507293d5438b1db 281 SUPERFAMILY SSF52540 12 264 2.99E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3000 b10ecc7c1d6248788507293d5438b1db 281 Pfam PF13401 AAA domain 42 168 1.1E-21 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0154 6e09d72320067a0cbe77211e757aa2f9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 4.4E-172 T 15-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VIBNI_A0154 6e09d72320067a0cbe77211e757aa2f9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.2E-158 T 15-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VIBNI_A0154 6e09d72320067a0cbe77211e757aa2f9 376 PIRSF PIRSF015658 1 376 2.6E-178 T 15-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VIBNI_A0968 5a581eed281d656d7508bc1ca6bbce42 422 SUPERFAMILY SSF52518 62 419 3.93E-97 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0968 5a581eed281d656d7508bc1ca6bbce42 422 Pfam PF00676 Dehydrogenase E1 component 95 389 3.6E-95 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VIBNI_A0968 5a581eed281d656d7508bc1ca6bbce42 422 Gene3D G3DSA:3.40.50.970 15 419 2.5E-123 T 15-10-2018 VIBNI_A1784 b2c7422137f2431966d173dfd74fdefd 69 SUPERFAMILY SSF52833 2 65 4.48E-9 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A1784 b2c7422137f2431966d173dfd74fdefd 69 Gene3D G3DSA:3.40.30.10 1 69 3.0E-12 T 15-10-2018 VIBNI_A1784 b2c7422137f2431966d173dfd74fdefd 69 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 60 5.9E-12 T 15-10-2018 IPR008554 Glutaredoxin-like VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 Gene3D G3DSA:3.40.50.2300 1 131 4.0E-37 T 15-10-2018 VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 SMART SM00862 150 224 2.5E-11 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 223 5.9E-12 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 SUPERFAMILY SSF52172 3 183 1.12E-39 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 Pfam PF00072 Response regulator receiver domain 7 116 1.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 SMART SM00448 5 116 6.3E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2674 baf1aadc75cd4518f01623823bcfbb8a 226 Gene3D G3DSA:1.10.10.10 132 226 2.8E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3012 082d0724ab0457238a52a8de868c5bc0 426 SUPERFAMILY SSF81301 4 147 1.46E-17 T 15-10-2018 VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 PIRSF PIRSF006325 1 242 4.2E-124 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 Pfam PF13649 Methyltransferase domain 60 158 2.6E-14 T 15-10-2018 VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.6E-117 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 43.128 T 15-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 SUPERFAMILY SSF53335 20 242 9.91E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2272 f130d2ef367fce2de646da952b1e46b4 242 Gene3D G3DSA:3.40.50.150 18 242 2.8E-63 T 15-10-2018 VIBNI_B0463 89d3134855c4b522c352d30374484d53 221 SMART SM00882 10 205 2.2E-60 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_B0463 89d3134855c4b522c352d30374484d53 221 Pfam PF01144 Coenzyme A transferase 10 204 8.5E-36 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_B0463 89d3134855c4b522c352d30374484d53 221 Gene3D G3DSA:3.40.1080.10 4 217 1.8E-90 T 15-10-2018 VIBNI_B0463 89d3134855c4b522c352d30374484d53 221 SUPERFAMILY SSF100950 8 219 5.76E-70 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B0463 89d3134855c4b522c352d30374484d53 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 9 210 2.1E-91 T 15-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 VIBNI_B1194 461985fe3377ff006a9789940e0144c8 338 Pfam PF00174 Oxidoreductase molybdopterin binding domain 112 271 1.9E-27 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VIBNI_B1194 461985fe3377ff006a9789940e0144c8 338 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 338 53.022 T 15-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 VIBNI_B1194 461985fe3377ff006a9789940e0144c8 338 Gene3D G3DSA:3.90.420.10 70 338 1.3E-109 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VIBNI_B1194 461985fe3377ff006a9789940e0144c8 338 SUPERFAMILY SSF56524 77 334 9.55E-91 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 2.6E-108 T 15-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 SMART SM00028 327 360 0.0098 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 Pfam PF07219 HemY protein N-terminus 26 130 3.1E-27 T 15-10-2018 IPR010817 HemY, N-terminal VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 Pfam PF07719 Tetratricopeptide repeat 329 357 9.6E-6 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 SUPERFAMILY SSF48452 304 390 4.96E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 SUPERFAMILY SSF48452 81 209 2.09E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3774 f5457f781a7a77dfc2e0e0411070b143 395 Gene3D G3DSA:1.25.40.10 299 395 1.5E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1438 6536258b5e3b766ae9c79b359c984554 267 Pfam PF07024 ImpE protein 139 259 1.0E-28 T 15-10-2018 IPR009211 Predicted virulence protein, SciE type VIBNI_A1438 6536258b5e3b766ae9c79b359c984554 267 SUPERFAMILY SSF144059 3 260 1.22E-77 T 15-10-2018 VIBNI_A1438 6536258b5e3b766ae9c79b359c984554 267 Gene3D G3DSA:1.25.40.10 4 87 1.2E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1438 6536258b5e3b766ae9c79b359c984554 267 PIRSF PIRSF029288 1 265 1.8E-79 T 15-10-2018 IPR009211 Predicted virulence protein, SciE type VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 5.5E-95 T 15-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 4.9E-38 T 15-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 SUPERFAMILY SSF53927 1 144 1.62E-39 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 59 141 1.3E-12 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 Gene3D G3DSA:3.40.140.10 29 179 9.0E-44 T 15-10-2018 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 Gene3D G3DSA:3.40.140.10 180 295 3.6E-24 T 15-10-2018 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 PIRSF PIRSF006334 14 295 4.8E-103 T 15-10-2018 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 SUPERFAMILY SSF53927 152 283 3.7E-32 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A1415 b1bc58d28aa3151fe3f0d57321264a7b 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 47.78 T 15-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 Gene3D G3DSA:1.10.10.10 1 89 8.6E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 SUPERFAMILY SSF53850 89 297 2.64E-21 T 15-10-2018 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 Gene3D G3DSA:3.40.190.10 105 282 3.9E-21 T 15-10-2018 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 SUPERFAMILY SSF46785 2 82 1.52E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 Pfam PF03466 LysR substrate binding domain 89 284 1.5E-18 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 Gene3D G3DSA:3.40.190.10 166 266 3.9E-21 T 15-10-2018 VIBNI_B1064 cf4e0abb985904802a6a3fc49e06ff8d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.0E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1553 f46513d8fc44158705e205b0f34c46eb 343 Pfam PF01757 Acyltransferase family 10 329 3.3E-26 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 Pfam PF00005 ABC transporter 284 437 7.9E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 SUPERFAMILY SSF52540 253 497 2.33E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 SUPERFAMILY SSF52540 12 235 1.6E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 Gene3D G3DSA:3.40.50.300 8 239 8.6E-56 T 15-10-2018 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 Gene3D G3DSA:3.40.50.300 262 504 2.0E-41 T 15-10-2018 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 Pfam PF00005 ABC transporter 28 177 4.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 SMART SM00382 292 486 1.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0472 620bdd0e41818b913bd76ce005cc8d16 510 SMART SM00382 37 225 4.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1155 f304a9aa9e6d7be31b4dd813791a88e4 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 1.7E-51 T 15-10-2018 IPR021422 Protein of unknown function DUF3069 VIBNI_B1155 f304a9aa9e6d7be31b4dd813791a88e4 145 Gene3D G3DSA:1.10.3440.10 2 143 9.9E-6 T 15-10-2018 IPR023132 Sama2622-like superfamily VIBNI_B1155 f304a9aa9e6d7be31b4dd813791a88e4 145 SUPERFAMILY SSF158675 1 144 2.88E-49 T 15-10-2018 IPR023132 Sama2622-like superfamily VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 471 8.4E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 Gene3D G3DSA:3.30.565.10 333 477 1.2E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 SMART SM00387 371 476 2.6E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 SMART SM00304 221 273 6.9E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 SUPERFAMILY SSF47384 258 323 2.35E-9 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 Gene3D G3DSA:1.10.287.130 225 332 1.1E-16 T 15-10-2018 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 5.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 5.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 5.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2448 51adf21250e38a7cecbe15ebdc52f79f 478 SUPERFAMILY SSF55874 335 474 2.49E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1789 16f47d4de89923616230857db413e3b3 298 SUPERFAMILY SSF161098 58 282 1.83E-58 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1789 16f47d4de89923616230857db413e3b3 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 297 5.2E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1789 16f47d4de89923616230857db413e3b3 298 Gene3D G3DSA:1.10.3720.10 54 293 1.9E-66 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1978 921c43ed4d436edaecc263752531976d 459 SUPERFAMILY SSF52540 10 348 2.13E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1978 921c43ed4d436edaecc263752531976d 459 Pfam PF04317 YcjX-like family, DUF463 20 458 3.3E-187 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VIBNI_A1978 921c43ed4d436edaecc263752531976d 459 PIRSF PIRSF019381 1 459 4.6E-202 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VIBNI_A2293 449481812ffdcd64a2d19c586fdad9d3 543 Pfam PF03553 Na+/H+ antiporter family 177 508 4.6E-101 T 15-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 SUPERFAMILY SSF52283 1 360 1.45E-66 T 15-10-2018 VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 Gene3D G3DSA:3.40.50.720 130 305 4.1E-137 T 15-10-2018 VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 PIRSF PIRSF000183 1 371 4.9E-156 T 15-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 Gene3D G3DSA:3.40.50.720 3 353 4.1E-137 T 15-10-2018 VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.7E-83 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 SMART SM01003 4 137 2.9E-79 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 SUPERFAMILY SSF51735 137 303 1.71E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 SMART SM01002 149 297 6.8E-89 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.9E-46 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VIBNI_A2325 d5a575d20d5acdd4af08420fb5918bcf 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.5E-154 T 15-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 Gene3D G3DSA:3.90.470.20 1 126 2.2E-41 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.079 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 1.5E-22 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 4.2E-33 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 SUPERFAMILY SSF56214 3 125 8.76E-31 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 89 3.0E-29 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VIBNI_A0118 8eaf3216bd4a99790d682e9499f092ca 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 126 1.2E-41 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 4.6E-13 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 Gene3D G3DSA:1.10.10.10 2 81 4.7E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 SUPERFAMILY SSF46689 6 80 4.3E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 SUPERFAMILY SSF53697 100 263 4.45E-18 T 15-10-2018 VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 Pfam PF01380 SIS domain 133 258 5.9E-23 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A1352 429f705dc16b967734bde82fccfb6497 289 Gene3D G3DSA:3.40.50.10490 98 283 1.7E-30 T 15-10-2018 VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 9.2E-144 T 15-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.1E-18 T 15-10-2018 VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 49.811 T 15-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 SUPERFAMILY SSF54862 165 310 1.05E-18 T 15-10-2018 VIBNI_A3223 49bd627d6967a87599f38b776a7af1b3 370 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 2.0E-23 T 15-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VIBNI_B2041 5c776bd2ff4c62fb5765ef9b468d74e8 337 Pfam PF02615 Malate/L-lactate dehydrogenase 6 333 5.2E-113 T 15-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 VIBNI_B2041 5c776bd2ff4c62fb5765ef9b468d74e8 337 SUPERFAMILY SSF89733 4 334 1.31E-107 T 15-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 VIBNI_B2041 5c776bd2ff4c62fb5765ef9b468d74e8 337 Gene3D G3DSA:3.30.1370.60 70 307 6.3E-111 T 15-10-2018 VIBNI_B2041 5c776bd2ff4c62fb5765ef9b468d74e8 337 Gene3D G3DSA:1.10.1530.10 11 326 6.3E-111 T 15-10-2018 VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 359 368 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 Gene3D G3DSA:3.40.50.12240 27 450 2.6E-156 T 15-10-2018 VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 35 446 1.1E-193 T 15-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 SMART SM00382 169 352 6.1E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 SUPERFAMILY SSF52540 105 373 3.19E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 368 3.2E-74 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A0726 352c397b40fe7085eefff3547be7dbd8 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 448 8.6E-175 T 15-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 Gene3D G3DSA:1.10.10.10 95 175 6.8E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 215 34.784 T 15-10-2018 IPR007432 Protein of unknown function DUF480 VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.5E-64 T 15-10-2018 IPR007432 Protein of unknown function DUF480 VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 SUPERFAMILY SSF46785 90 174 1.09E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 SUPERFAMILY SSF46785 3 84 3.17E-31 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1310 cb0e598c04607b6955410b1ae832a026 219 Gene3D G3DSA:1.10.10.10 1 90 8.3E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2571 be9f3f2ea761847a0dce2142c9c0eafa 254 Pfam PF08907 Domain of unknown function (DUF1853) 38 222 9.5E-37 T 15-10-2018 IPR015003 Protein of unknown function DUF1853 VIBNI_A1701 068a6d75a96872a0d09d413aab154948 243 Gene3D G3DSA:3.40.50.150 4 229 3.9E-28 T 15-10-2018 VIBNI_A1701 068a6d75a96872a0d09d413aab154948 243 Pfam PF08241 Methyltransferase domain 39 128 1.3E-15 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VIBNI_A1701 068a6d75a96872a0d09d413aab154948 243 SUPERFAMILY SSF53335 8 150 5.77E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1480 3f9886e06764dc7e3e545d0913e81293 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 181 216 2.6E-6 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A1480 3f9886e06764dc7e3e545d0913e81293 247 Gene3D G3DSA:2.160.10.10 62 246 8.4E-37 T 15-10-2018 VIBNI_A1480 3f9886e06764dc7e3e545d0913e81293 247 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A1480 3f9886e06764dc7e3e545d0913e81293 247 SUPERFAMILY SSF51161 121 240 1.23E-30 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A0631 f87f0271fe3f760c0c75291377a1edf3 196 PIRSF PIRSF004525 7 195 5.1E-12 T 15-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 Pfam PF01636 Phosphotransferase enzyme family 36 253 1.2E-42 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 SUPERFAMILY SSF56112 7 327 1.02E-88 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 Gene3D G3DSA:1.10.510.10 60 258 1.4E-123 T 15-10-2018 VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.726 T 15-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 Gene3D G3DSA:3.30.200.70 13 108 1.4E-123 T 15-10-2018 VIBNI_A3845 3bdacb6b5ec92d6f38ae67021fd59d95 328 Gene3D G3DSA:1.20.1270.170 149 307 1.4E-123 T 15-10-2018 VIBNI_B1874 0f57788595b2c75361876446ec037a77 225 Gene3D G3DSA:3.30.40.60 122 223 3.9E-7 T 15-10-2018 VIBNI_B1874 0f57788595b2c75361876446ec037a77 225 SMART SM00507 141 200 6.4E-12 T 15-10-2018 IPR003615 HNH nuclease VIBNI_B1874 0f57788595b2c75361876446ec037a77 225 Pfam PF01844 HNH endonuclease 154 204 2.6E-11 T 15-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VIBNI_A1875 7a925dd511ff7303ea70c4b3251fbb47 152 Gene3D G3DSA:1.20.1290.10 1 147 5.9E-41 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VIBNI_A1875 7a925dd511ff7303ea70c4b3251fbb47 152 SUPERFAMILY SSF69118 20 147 1.44E-36 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VIBNI_A1875 7a925dd511ff7303ea70c4b3251fbb47 152 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 98 5.1E-17 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VIBNI_A1875 7a925dd511ff7303ea70c4b3251fbb47 152 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 82 2.5E-16 T 15-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 Gene3D G3DSA:1.10.10.10 8 101 2.3E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 SUPERFAMILY SSF46785 9 85 5.51E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.1E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 Pfam PF03466 LysR substrate binding domain 95 296 6.3E-22 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 SUPERFAMILY SSF53850 94 297 5.79E-25 T 15-10-2018 VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 Gene3D G3DSA:3.40.190.10 105 292 1.8E-44 T 15-10-2018 VIBNI_A2763 5be893ee3d5767db6d4d9cb80f932c7e 299 Gene3D G3DSA:3.40.190.10 165 269 1.8E-44 T 15-10-2018 VIBNI_A1476 7e0023756d0b8ef96cad665bce6038ed 358 SUPERFAMILY SSF53756 4 355 3.1E-68 T 15-10-2018 VIBNI_A1476 7e0023756d0b8ef96cad665bce6038ed 358 Gene3D G3DSA:3.40.50.2000 14 352 2.6E-62 T 15-10-2018 VIBNI_A1476 7e0023756d0b8ef96cad665bce6038ed 358 Pfam PF13439 Glycosyltransferase Family 4 13 171 2.1E-15 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_A1476 7e0023756d0b8ef96cad665bce6038ed 358 Gene3D G3DSA:3.40.50.2000 168 341 2.6E-62 T 15-10-2018 VIBNI_A1476 7e0023756d0b8ef96cad665bce6038ed 358 Pfam PF00534 Glycosyl transferases group 1 182 316 5.2E-35 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 Gene3D G3DSA:1.10.287.130 290 414 4.0E-11 T 15-10-2018 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 Gene3D G3DSA:3.30.565.10 428 567 1.8E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 SUPERFAMILY SSF55874 430 567 2.23E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 SMART SM00387 457 568 6.4E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 512 6.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 526 6.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 6.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 6.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1720 2c74da3182d9dd3f9cceeb8bf61501ba 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 566 9.8E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A0701 157f54ea99e7be95f6058043918d618a 115 Pfam PF11169 Protein of unknown function (DUF2956) 9 111 6.2E-41 T 15-10-2018 IPR021339 Protein of unknown function DUF2956 VIBNI_A2295 a8ca19d0283ecac58f5dbf07d1583648 224 Pfam PF00154 recA bacterial DNA recombination protein 10 128 2.0E-5 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VIBNI_A2295 a8ca19d0283ecac58f5dbf07d1583648 224 PIRSF PIRSF037290 1 222 3.6E-56 T 15-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VIBNI_A2295 a8ca19d0283ecac58f5dbf07d1583648 224 SUPERFAMILY SSF52540 50 157 1.95E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2295 a8ca19d0283ecac58f5dbf07d1583648 224 Gene3D G3DSA:3.40.50.300 50 156 1.8E-25 T 15-10-2018 VIBNI_A3759 96d6a7b0a32e9f7002b4542e12f86cab 150 Pfam PF01878 EVE domain 2 148 8.3E-56 T 15-10-2018 IPR002740 EVE domain VIBNI_A3759 96d6a7b0a32e9f7002b4542e12f86cab 150 Gene3D G3DSA:3.10.590.10 1 150 4.2E-65 T 15-10-2018 VIBNI_A3759 96d6a7b0a32e9f7002b4542e12f86cab 150 SUPERFAMILY SSF88697 1 148 1.28E-61 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_B0793 f8c735da884c4ef99014f53d2640b95b 109 SUPERFAMILY SSF110857 1 106 6.41E-20 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VIBNI_B0793 f8c735da884c4ef99014f53d2640b95b 109 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 1.5E-14 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VIBNI_B0793 f8c735da884c4ef99014f53d2640b95b 109 Gene3D G3DSA:3.10.490.10 1 109 1.3E-20 T 15-10-2018 VIBNI_B0345 974ce7015e4961f9259a3a950e440eea 259 Gene3D G3DSA:1.25.40.590 36 195 1.2E-58 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VIBNI_B0345 974ce7015e4961f9259a3a950e440eea 259 Pfam PF09850 Type VI secretion system protein DotU 41 242 1.3E-63 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU VIBNI_B0345 974ce7015e4961f9259a3a950e440eea 259 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 39 248 2.1E-70 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU VIBNI_B1003 668ccb911f79699eef6e4c1acf819ad6 127 Gene3D G3DSA:3.30.70.100 1 119 6.5E-31 T 15-10-2018 VIBNI_B1003 668ccb911f79699eef6e4c1acf819ad6 127 SMART SM01034 1 91 3.3E-29 T 15-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VIBNI_B1003 668ccb911f79699eef6e4c1acf819ad6 127 Pfam PF04940 Sensors of blue-light using FAD 1 90 3.4E-27 T 15-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VIBNI_B1003 668ccb911f79699eef6e4c1acf819ad6 127 SUPERFAMILY SSF54975 2 98 4.25E-29 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A2943 b222f885fee0dac613926dda6177cd0e 254 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 95 115 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A2943 b222f885fee0dac613926dda6177cd0e 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 253 1.1E-72 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A2943 b222f885fee0dac613926dda6177cd0e 254 SUPERFAMILY SSF52096 3 253 3.13E-85 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A2943 b222f885fee0dac613926dda6177cd0e 254 Gene3D G3DSA:3.90.226.10 2 196 4.4E-71 T 15-10-2018 VIBNI_A2943 b222f885fee0dac613926dda6177cd0e 254 Gene3D G3DSA:1.10.12.10 197 252 6.3E-24 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VIBNI_A1421 e5266b760252ad8841a849b8d2d0a889 424 SUPERFAMILY SSF56112 98 307 3.47E-16 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A1421 e5266b760252ad8841a849b8d2d0a889 424 Pfam PF03109 ABC1 family 112 208 2.2E-23 T 15-10-2018 IPR004147 UbiB domain VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Pfam PF00364 Biotin-requiring enzyme 5 76 3.4E-18 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 170 386 3.1E-62 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Pfam PF02817 e3 binding domain 128 160 5.0E-11 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Gene3D G3DSA:3.30.559.10 161 388 1.8E-68 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Gene3D G3DSA:2.40.50.100 1 101 3.2E-24 T 15-10-2018 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 SUPERFAMILY SSF52777 163 386 5.78E-60 T 15-10-2018 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 SUPERFAMILY SSF47005 123 163 2.09E-8 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 SUPERFAMILY SSF51230 1 90 6.15E-23 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A0480 1f52e142c98c8138b1ada0833430f586 388 Gene3D G3DSA:4.10.320.10 125 160 1.1E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 74 1.8E-6 T 15-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 Gene3D G3DSA:1.10.10.10 77 160 9.0E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 Gene3D G3DSA:3.30.160.70 5 73 7.2E-17 T 15-10-2018 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 9 158 44.194 T 15-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 SUPERFAMILY SSF53155 6 83 4.12E-18 T 15-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 15-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 159 8.8E-34 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 SUPERFAMILY SSF46767 77 160 8.24E-34 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VIBNI_B0941 d36961dc678cef7172814e0379bc5746 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 4.1E-38 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 Gene3D G3DSA:3.40.50.720 3 256 4.3E-80 T 15-10-2018 VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.7E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 3.0E-58 T 15-10-2018 VIBNI_A1687 8c1dee817ded74ad2b166312f2302512 257 SUPERFAMILY SSF51735 2 254 8.59E-77 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1035 578d22b1e0d3469818804f6388c6a175 338 SUPERFAMILY SSF53822 35 327 2.09E-42 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1035 578d22b1e0d3469818804f6388c6a175 338 Pfam PF13407 Periplasmic binding protein domain 40 285 1.7E-38 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1035 578d22b1e0d3469818804f6388c6a175 338 Gene3D G3DSA:3.40.50.2300 138 323 5.0E-59 T 15-10-2018 VIBNI_A1035 578d22b1e0d3469818804f6388c6a175 338 Gene3D G3DSA:3.40.50.2300 47 315 5.0E-59 T 15-10-2018 VIBNI_B0605 90e15e03952fac0641e26dcf48514a8d 427 SUPERFAMILY SSF53822 28 399 2.21E-87 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0605 90e15e03952fac0641e26dcf48514a8d 427 Gene3D G3DSA:3.40.50.2300 31 365 2.5E-130 T 15-10-2018 VIBNI_B0605 90e15e03952fac0641e26dcf48514a8d 427 Gene3D G3DSA:3.40.50.2300 144 384 2.5E-130 T 15-10-2018 VIBNI_B0605 90e15e03952fac0641e26dcf48514a8d 427 Pfam PF13433 Periplasmic binding protein domain 29 397 5.7E-170 T 15-10-2018 VIBNI_B0605 90e15e03952fac0641e26dcf48514a8d 427 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 29 394 3.0E-171 T 15-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like VIBNI_A0743 b361dc82cce23cff3d7670b8159abdf4 122 SMART SM00448 1 115 6.5E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0743 b361dc82cce23cff3d7670b8159abdf4 122 Pfam PF00072 Response regulator receiver domain 3 115 1.2E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0743 b361dc82cce23cff3d7670b8159abdf4 122 Gene3D G3DSA:3.40.50.2300 1 122 6.9E-40 T 15-10-2018 VIBNI_A0743 b361dc82cce23cff3d7670b8159abdf4 122 SUPERFAMILY SSF52172 1 120 4.13E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 SUPERFAMILY SSF52402 6 209 6.05E-75 T 15-10-2018 VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.4E-163 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 PIRSF PIRSF002936 1 302 3.1E-156 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 7.1E-65 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.522 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VIBNI_A3136 07e7e3e97cc76220cea613a036b726c8 302 Gene3D G3DSA:3.40.50.620 7 212 8.6E-67 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A0378 688c4428f426488983965f5bc41defac 555 Pfam PF12848 ABC transporter 230 304 4.4E-13 T 15-10-2018 IPR032781 ABC-transporter extension domain VIBNI_A0378 688c4428f426488983965f5bc41defac 555 SUPERFAMILY SSF52540 9 242 2.81E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0378 688c4428f426488983965f5bc41defac 555 SUPERFAMILY SSF52540 306 527 4.04E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0378 688c4428f426488983965f5bc41defac 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0378 688c4428f426488983965f5bc41defac 555 Gene3D G3DSA:3.40.50.300 1 285 8.3E-85 T 15-10-2018 VIBNI_A0378 688c4428f426488983965f5bc41defac 555 Pfam PF00005 ABC transporter 22 191 2.3E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0378 688c4428f426488983965f5bc41defac 555 SMART SM00382 348 522 1.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0378 688c4428f426488983965f5bc41defac 555 SMART SM00382 31 236 5.5E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0378 688c4428f426488983965f5bc41defac 555 Gene3D G3DSA:3.40.50.300 286 555 1.8E-77 T 15-10-2018 VIBNI_A0378 688c4428f426488983965f5bc41defac 555 Pfam PF00005 ABC transporter 340 473 7.9E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0378 688c4428f426488983965f5bc41defac 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 9.3E-292 T 15-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VIBNI_A0779 3e4a66c8337433565e89fd40030dcac5 278 SUPERFAMILY SSF51197 1 271 6.04E-65 T 15-10-2018 VIBNI_A0779 3e4a66c8337433565e89fd40030dcac5 278 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 10 249 4.9E-50 T 15-10-2018 IPR008775 Phytanoyl-CoA dioxygenase VIBNI_A0779 3e4a66c8337433565e89fd40030dcac5 278 Gene3D G3DSA:2.60.120.620 1 275 2.4E-96 T 15-10-2018 VIBNI_A0887 cbe50b1f7f9dac296873793453987976 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 1.6E-64 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VIBNI_A0887 cbe50b1f7f9dac296873793453987976 212 Pfam PF01914 MarC family integral membrane protein 8 208 8.6E-66 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 SUPERFAMILY SSF56349 14 295 3.83E-52 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 97 1.2E-18 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 301 55.067 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 16 303 1.7E-105 T 15-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 Gene3D G3DSA:1.10.443.10 118 295 3.8E-55 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 Pfam PF00589 Phage integrase family 119 287 9.9E-47 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A3765 caa50c1f85f28f77f506c445a639bab2 311 Gene3D G3DSA:1.10.150.130 11 105 1.8E-16 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 1.1E-22 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 1.1E-22 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 PRINTS PR01008 Flagellar L-ring protein signature 102 114 1.1E-22 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 1.1E-22 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 1.1E-22 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 28.246 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A2635 e6a565bb325586973e15df815bffcb8d 258 Pfam PF02107 Flagellar L-ring protein 81 256 2.0E-58 T 15-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 SUPERFAMILY SSF51230 80 155 1.07E-26 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.0E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.0E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.0E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 Gene3D G3DSA:2.40.50.100 77 155 4.0E-32 T 15-10-2018 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 Pfam PF00364 Biotin-requiring enzyme 80 154 8.2E-26 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3302 f9f7994acba5a48fc77f34d08fb3e942 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 2.1E-63 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_A0517 ffeb80f2cecb7f214baad926b5d3178f 382 Pfam PF02417 Chromate transporter 213 374 9.6E-33 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VIBNI_A0517 ffeb80f2cecb7f214baad926b5d3178f 382 Pfam PF02417 Chromate transporter 3 168 1.4E-34 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VIBNI_A0517 ffeb80f2cecb7f214baad926b5d3178f 382 PIRSF PIRSF004810 1 382 9.7E-115 T 15-10-2018 IPR014047 Chromate transporter, long chain VIBNI_A0517 ffeb80f2cecb7f214baad926b5d3178f 382 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 371 1.5E-91 T 15-10-2018 IPR014047 Chromate transporter, long chain VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 PIRSF PIRSF000876 2 346 3.6E-131 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 SUPERFAMILY SSF52738 156 343 9.42E-65 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 345 37.637 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 Pfam PF01339 CheB methylesterase 161 338 6.2E-56 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 SUPERFAMILY SSF52172 3 110 8.97E-29 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 Gene3D G3DSA:3.40.50.2300 2 134 2.2E-32 T 15-10-2018 VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 Gene3D G3DSA:3.40.50.180 149 346 2.8E-70 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 Pfam PF00072 Response regulator receiver domain 7 110 9.7E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0014 57a957c43f43c9ed49ea6e871d236113 347 SMART SM00448 5 118 9.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2357 cf7e9b095612a71ea4561ed98b549fec 338 Gene3D G3DSA:3.30.160.60 302 338 1.2E-18 T 15-10-2018 VIBNI_A2357 cf7e9b095612a71ea4561ed98b549fec 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 8 337 8.3E-96 T 15-10-2018 IPR003770 Endolytic murein transglycosylase VIBNI_A2357 cf7e9b095612a71ea4561ed98b549fec 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 332 32.26 T 15-10-2018 IPR003770 Endolytic murein transglycosylase VIBNI_A2357 cf7e9b095612a71ea4561ed98b549fec 338 Pfam PF02618 YceG-like family 43 328 2.0E-78 T 15-10-2018 IPR003770 Endolytic murein transglycosylase VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 2.1E-111 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.0E-28 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.0E-34 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.693 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 SUPERFAMILY SSF53901 7 325 2.62E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B1117 3939d83f8e88f1eeb22724afbd21c3a5 362 Gene3D G3DSA:3.40.47.10 2 362 1.9E-155 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 Pfam PF03466 LysR substrate binding domain 89 293 5.9E-42 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 Gene3D G3DSA:3.40.190.10 93 290 5.7E-71 T 15-10-2018 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 Gene3D G3DSA:1.10.10.10 1 92 5.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 SUPERFAMILY SSF46785 1 112 6.46E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 SUPERFAMILY SSF53850 89 297 2.17E-39 T 15-10-2018 VIBNI_A2225 31b49084b3184f2ae4afa5f0465d895e 303 Gene3D G3DSA:3.40.190.10 163 267 5.7E-71 T 15-10-2018 VIBNI_A3489 102ba8358b28ffb290fc0ec99ac65775 325 Gene3D G3DSA:1.10.3720.10 84 314 5.3E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3489 102ba8358b28ffb290fc0ec99ac65775 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 8.9E-37 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3489 102ba8358b28ffb290fc0ec99ac65775 325 SUPERFAMILY SSF161098 90 302 1.31E-15 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1639 6a154fbac5a10eac60a71796fc372b49 320 SUPERFAMILY SSF53300 82 278 2.23E-36 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B1639 6a154fbac5a10eac60a71796fc372b49 320 Gene3D G3DSA:3.40.50.410 81 283 5.7E-58 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B1639 6a154fbac5a10eac60a71796fc372b49 320 Pfam PF00092 von Willebrand factor type A domain 84 276 1.6E-32 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_B1639 6a154fbac5a10eac60a71796fc372b49 320 SMART SM00327 82 254 3.5E-19 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 4.4E-109 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 Pfam PF00288 GHMP kinases N terminal domain 89 156 2.4E-13 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 Pfam PF08544 GHMP kinases C terminal 218 291 5.6E-9 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 28.992 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PIRSF PIRSF000676 1 316 1.2E-79 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PRINTS PR00958 Homoserine kinase signature 103 118 2.5E-31 T 15-10-2018 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PRINTS PR00958 Homoserine kinase signature 181 198 2.5E-31 T 15-10-2018 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PRINTS PR00958 Homoserine kinase signature 10 25 2.5E-31 T 15-10-2018 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PRINTS PR00958 Homoserine kinase signature 143 156 2.5E-31 T 15-10-2018 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 PRINTS PR00958 Homoserine kinase signature 260 275 2.5E-31 T 15-10-2018 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 SUPERFAMILY SSF55060 178 294 1.4E-32 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 Gene3D G3DSA:3.30.70.890 174 283 5.4E-89 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 SUPERFAMILY SSF54211 3 191 1.59E-34 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A0289 78d32c1255df595645cc4790bd734e74 318 Gene3D G3DSA:3.30.230.10 5 173 5.4E-89 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_B1136 f58c278b713ff0c371391bb51ccba791 116 Pfam PF11782 Protein of unknown function (DUF3319) 1 85 9.6E-40 T 15-10-2018 IPR021753 Protein of unknown function DUF3319 VIBNI_A2220 dab4424a97685b21b0fc3f0bd76ff496 241 Pfam PF00535 Glycosyl transferase family 2 5 115 6.0E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A2220 dab4424a97685b21b0fc3f0bd76ff496 241 SUPERFAMILY SSF53448 1 204 1.13E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2220 dab4424a97685b21b0fc3f0bd76ff496 241 Gene3D G3DSA:3.90.550.10 1 199 3.4E-36 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 SUPERFAMILY SSF52540 17 430 1.41E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Gene3D G3DSA:1.20.120.1080 370 478 1.8E-7 T 15-10-2018 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Pfam PF04408 Helicase associated domain (HA2) 388 457 5.9E-9 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 SMART SM00490 226 327 1.4E-15 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 813 0.0 T 15-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Gene3D G3DSA:3.40.50.300 1 179 8.7E-52 T 15-10-2018 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 SMART SM00487 2 186 7.2E-12 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Pfam PF08482 ATP-dependent helicase C-terminal 669 801 5.5E-52 T 15-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 PIRSF PIRSF005496 1 815 0.0 T 15-10-2018 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Pfam PF00270 DEAD/DEAH box helicase 9 163 1.8E-8 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Pfam PF00271 Helicase conserved C-terminal domain 204 326 3.8E-14 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 Gene3D G3DSA:3.40.50.300 180 344 3.2E-52 T 15-10-2018 VIBNI_A2845 3695ec93086f11bb6af7b763c01afb0f 816 SMART SM00847 387 484 6.5E-5 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 8.3E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 Gene3D G3DSA:1.10.10.10 155 216 1.7E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 Gene3D G3DSA:3.40.50.2300 2 130 3.6E-26 T 15-10-2018 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 SUPERFAMILY SSF46894 148 212 1.77E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 Pfam PF00072 Response regulator receiver domain 5 115 4.9E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 SUPERFAMILY SSF52172 1 131 4.41E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 SMART SM00421 154 211 5.5E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.4E-11 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_A1323 d241f8f12895d8ac38453430dab1660e 222 SMART SM00448 2 116 2.2E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B2123 a14eb551f3dc2da0dfc24401d2d328ee 98 Pfam PF11287 Protein of unknown function (DUF3088) 2 83 5.5E-25 T 15-10-2018 IPR021439 Protein of unknown function DUF3088 VIBNI_B1569 4efaeca9ebfbe484d4727b71491ad935 201 Gene3D G3DSA:3.40.30.10 30 201 9.8E-40 T 15-10-2018 VIBNI_B1569 4efaeca9ebfbe484d4727b71491ad935 201 Pfam PF02630 SCO1/SenC 25 177 7.1E-33 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_B1569 4efaeca9ebfbe484d4727b71491ad935 201 SUPERFAMILY SSF52833 41 198 4.69E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1140 f138293b39b89646d3b30fdfbb9b3a71 47 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 46 2.3E-26 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 VIBNI_B1140 f138293b39b89646d3b30fdfbb9b3a71 47 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 44 2.0E-12 T 15-10-2018 IPR005371 Uncharacterised protein family UPF0181 VIBNI_A3729 8691fd8f7379c3daba43d90b885f29b0 243 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 233 40.707 T 15-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VIBNI_A3729 8691fd8f7379c3daba43d90b885f29b0 243 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 231 4.5E-67 T 15-10-2018 VIBNI_A3729 8691fd8f7379c3daba43d90b885f29b0 243 Gene3D G3DSA:1.10.510.10 138 242 4.0E-16 T 15-10-2018 VIBNI_A3729 8691fd8f7379c3daba43d90b885f29b0 243 SUPERFAMILY SSF56112 35 194 2.16E-18 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A3479 2a07509126ca9d54b5c377bdfba507c7 197 Pfam PF13511 Domain of unknown function (DUF4124) 11 62 5.8E-9 T 15-10-2018 IPR025392 Domain of unknown function DUF4124 VIBNI_A1607 0db76f5afc85dbc20b7a27634528d82f 69 SUPERFAMILY SSF47413 1 58 4.33E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A1607 0db76f5afc85dbc20b7a27634528d82f 69 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 59 4.7E-20 T 15-10-2018 VIBNI_A1607 0db76f5afc85dbc20b7a27634528d82f 69 Gene3D G3DSA:1.10.260.40 1 60 1.2E-24 T 15-10-2018 VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 1.3E-134 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.091 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SUPERFAMILY SSF50998 34 375 1.44E-80 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 Gene3D G3DSA:2.130.10.10 18 385 3.0E-96 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 147 178 0.029 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 281 312 11.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 191 223 460.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 243 274 55.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 106 138 0.0032 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 322 353 0.014 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 SMART SM00564 63 94 6.0E-6 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VIBNI_A2772 0ff6fe1695223a3758baecfbdceef413 385 Pfam PF13360 PQQ-like domain 76 310 6.4E-51 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VIBNI_B0281 aca8e2396a363ad9969633cd7a4520e7 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 3.4E-59 T 15-10-2018 IPR018636 Protein of unknown function DUF2058 VIBNI_B0221 aad0ef8e7657cc70811b88fb0f109bdf 756 Pfam PF12831 FAD dependent oxidoreductase 20 433 9.1E-93 T 15-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal VIBNI_B0221 aad0ef8e7657cc70811b88fb0f109bdf 756 SUPERFAMILY SSF51905 1 407 7.41E-20 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B0221 aad0ef8e7657cc70811b88fb0f109bdf 756 Gene3D G3DSA:3.50.50.60 2 70 7.9E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3435 4dceffae903612e09b79718345d664d2 66 Pfam PF04964 Flp/Fap pilin component 13 58 1.5E-13 T 15-10-2018 IPR007047 Flp/Fap pilin component VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 434 4.6E-69 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 PIRSF PIRSF002741 9 518 5.7E-77 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 SUPERFAMILY SSF53850 28 512 1.34E-101 T 15-10-2018 VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 Gene3D G3DSA:3.40.190.10 190 499 4.9E-99 T 15-10-2018 VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 Gene3D G3DSA:3.90.76.10 37 189 4.9E-99 T 15-10-2018 VIBNI_A2537 bb5f525fab69a0217cfd4eb0c3dc8fb1 520 Gene3D G3DSA:3.10.105.10 267 490 4.9E-99 T 15-10-2018 VIBNI_A0646 1c1d28d6ab539283b094b7bb2eac21a6 431 PIRSF PIRSF005353 1 431 2.2E-187 T 15-10-2018 IPR026033 Purine permease PbuG-like VIBNI_A0646 1c1d28d6ab539283b094b7bb2eac21a6 431 Pfam PF00860 Permease family 17 391 1.3E-53 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3230 810891e0b17d46966530f2c4e934f803 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 467 1.4E-47 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VIBNI_A3230 810891e0b17d46966530f2c4e934f803 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 465 1.0E-78 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 Gene3D G3DSA:2.170.15.10 145 391 3.7E-120 T 15-10-2018 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 Gene3D G3DSA:3.30.412.10 64 368 3.7E-120 T 15-10-2018 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 SUPERFAMILY SSF56973 64 409 2.35E-74 T 15-10-2018 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 PRINTS PR00754 Aerolysin signature 211 235 1.2E-17 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 PRINTS PR00754 Aerolysin signature 81 103 1.2E-17 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 PRINTS PR00754 Aerolysin signature 371 390 1.2E-17 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 PRINTS PR00754 Aerolysin signature 285 308 1.2E-17 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 PRINTS PR00754 Aerolysin signature 329 348 1.2E-17 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 Pfam PF01117 Aerolysin toxin 64 413 9.9E-101 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0210 6f031224710907729b46bf106afaaa9d 451 SMART SM00999 61 436 3.9E-160 T 15-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 Gene3D G3DSA:3.30.1330.60 78 213 5.5E-33 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 Pfam PF00691 OmpA family 113 207 1.8E-21 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 PRINTS PR01021 OMPA domain signature 158 174 2.3E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 PRINTS PR01021 OMPA domain signature 143 158 2.3E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 PRINTS PR01021 OMPA domain signature 114 136 2.3E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_B0692 f49c1d7902327a1a5b7856f5c30172ff 213 SUPERFAMILY SSF103088 103 211 7.72E-32 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0569 c345949be6cb3b81326ae66d31412826 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 3.1E-108 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VIBNI_A0569 c345949be6cb3b81326ae66d31412826 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 7.2E-62 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0569 c345949be6cb3b81326ae66d31412826 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.675 T 15-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VIBNI_A0569 c345949be6cb3b81326ae66d31412826 210 PIRSF PIRSF006102 4 210 5.2E-72 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A2690 090b0ba905152b40d4af54ddbe7df0da 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 348 1.1E-92 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VIBNI_A2690 090b0ba905152b40d4af54ddbe7df0da 348 SUPERFAMILY SSF51004 12 348 1.44E-32 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VIBNI_A2690 090b0ba905152b40d4af54ddbe7df0da 348 Gene3D G3DSA:2.130.10.10 4 348 2.4E-94 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A0916 671f8baa1d9fdb244a8366c54905becf 295 Gene3D G3DSA:3.40.50.12300 4 294 6.9E-79 T 15-10-2018 IPR038136 Gluconeogenesis factor superfamily VIBNI_A0916 671f8baa1d9fdb244a8366c54905becf 295 SUPERFAMILY SSF142338 6 291 3.79E-82 T 15-10-2018 VIBNI_A0916 671f8baa1d9fdb244a8366c54905becf 295 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 1.7E-73 T 15-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VIBNI_A0916 671f8baa1d9fdb244a8366c54905becf 295 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 257 2.3E-97 T 15-10-2018 IPR010119 Gluconeogenesis factor VIBNI_A0916 671f8baa1d9fdb244a8366c54905becf 295 Hamap MF_00973 Gluconeogenesis factor. 5 295 29.761 T 15-10-2018 IPR010119 Gluconeogenesis factor VIBNI_A0669 38243c81e1f7fb70b2095d0f045e42b1 144 Pfam PF05656 Protein of unknown function (DUF805) 12 128 1.9E-25 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VIBNI_B1182 a0518bb827090be33efdd283a6d7a063 205 Gene3D G3DSA:3.40.50.1110 19 205 7.1E-64 T 15-10-2018 IPR036514 SGNH hydrolase superfamily VIBNI_B1182 a0518bb827090be33efdd283a6d7a063 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 182 3.5E-20 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain VIBNI_B1182 a0518bb827090be33efdd283a6d7a063 205 SUPERFAMILY SSF52266 21 199 5.04E-47 T 15-10-2018 VIBNI_B1182 a0518bb827090be33efdd283a6d7a063 205 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 Pfam PF00072 Response regulator receiver domain 6 112 5.8E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 1.6E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 SMART SM00862 146 217 1.0E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 SUPERFAMILY SSF52172 4 116 9.82E-28 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-28 T 15-10-2018 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 SUPERFAMILY SSF46894 123 217 1.64E-28 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 SMART SM00448 3 111 1.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1143 932c4458bd8162ce3cbabb51b3696722 219 Gene3D G3DSA:1.10.10.10 126 219 1.2E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0637 26684871bdfd4fb1347ed2c3504dd4e5 278 Pfam PF00756 Putative esterase 23 271 6.8E-56 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VIBNI_A0637 26684871bdfd4fb1347ed2c3504dd4e5 278 Gene3D G3DSA:3.40.50.1820 4 278 2.4E-90 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0637 26684871bdfd4fb1347ed2c3504dd4e5 278 SUPERFAMILY SSF53474 5 278 8.73E-87 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0637 26684871bdfd4fb1347ed2c3504dd4e5 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 277 2.0E-118 T 15-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VIBNI_A2591 f728344a05d05389a65942bfc9a7f567 332 Gene3D G3DSA:3.40.50.2300 60 305 2.8E-81 T 15-10-2018 VIBNI_A2591 f728344a05d05389a65942bfc9a7f567 332 Pfam PF13407 Periplasmic binding protein domain 38 297 5.7E-50 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A2591 f728344a05d05389a65942bfc9a7f567 332 SUPERFAMILY SSF53822 34 315 1.23E-56 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2591 f728344a05d05389a65942bfc9a7f567 332 Gene3D G3DSA:3.40.50.2300 136 279 2.8E-81 T 15-10-2018 VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 SMART SM00387 329 440 7.8E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 SUPERFAMILY SSF55874 293 440 3.54E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 Gene3D G3DSA:3.30.565.10 290 445 2.5E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 Gene3D G3DSA:2.60.120.10 12 130 1.1E-7 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 3.8E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 4.5E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 Pfam PF00027 Cyclic nucleotide-binding domain 21 100 1.6E-7 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 SUPERFAMILY SSF51206 17 129 1.11E-9 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A1054 57de7dbcbacc223f31eb07c59b2c0536 450 Gene3D G3DSA:1.10.287.130 131 284 1.2E-9 T 15-10-2018 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 PRINTS PR00092 Tyrosinase copper-binding domain signature 71 88 1.4E-14 T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 PRINTS PR00092 Tyrosinase copper-binding domain signature 238 256 1.4E-14 T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 PRINTS PR00092 Tyrosinase copper-binding domain signature 206 217 1.4E-14 T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 PRINTS PR00092 Tyrosinase copper-binding domain signature 108 113 1.4E-14 T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 SUPERFAMILY SSF48056 17 295 9.48E-48 T 15-10-2018 IPR008922 Uncharacterised domain, di-copper centre Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 Gene3D G3DSA:1.10.1280.10 17 308 1.2E-49 T 15-10-2018 IPR008922 Uncharacterised domain, di-copper centre Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 Pfam PF00264 Common central domain of tyrosinase 55 258 2.3E-35 T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 ProSitePatterns PS00497 Tyrosinase CuA-binding region signature. 70 88 - T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_B1404 34c01da34afc574cd10b50eaced8eaf6 472 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 239 250 - T 15-10-2018 IPR002227 Tyrosinase copper-binding domain GO:0016491 Reactome: R-HSA-5662702 VIBNI_A1698 687435d5111fef48e076a8849eb57a03 272 Gene3D G3DSA:3.40.50.150 4 226 4.5E-28 T 15-10-2018 VIBNI_A1698 687435d5111fef48e076a8849eb57a03 272 Pfam PF04072 Leucine carboxyl methyltransferase 43 170 1.1E-6 T 15-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VIBNI_A1698 687435d5111fef48e076a8849eb57a03 272 SUPERFAMILY SSF53335 10 225 1.44E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1698 687435d5111fef48e076a8849eb57a03 272 PIRSF PIRSF028177 1 269 2.6E-55 T 15-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VIBNI_A0393 1477671377782f97c7e1e8285f4166dc 261 PIRSF PIRSF028069 7 260 2.5E-89 T 15-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VIBNI_A0393 1477671377782f97c7e1e8285f4166dc 261 Pfam PF11932 Protein of unknown function (DUF3450) 15 252 7.5E-78 T 15-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VIBNI_A1940 0bdab45afcbf92bd99a0e749236baa6a 143 SUPERFAMILY SSF55729 19 132 7.69E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1940 0bdab45afcbf92bd99a0e749236baa6a 143 Gene3D G3DSA:3.40.630.30 12 143 1.5E-15 T 15-10-2018 VIBNI_A1940 0bdab45afcbf92bd99a0e749236baa6a 143 Pfam PF00583 Acetyltransferase (GNAT) family 29 116 1.1E-9 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0247 23e41350309a3f0e09c10c4d5e0e6ad4 163 Gene3D G3DSA:3.40.630.30 3 162 1.4E-33 T 15-10-2018 VIBNI_B0247 23e41350309a3f0e09c10c4d5e0e6ad4 163 SUPERFAMILY SSF55729 7 163 5.4E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0247 23e41350309a3f0e09c10c4d5e0e6ad4 163 Pfam PF13673 Acetyltransferase (GNAT) domain 36 146 2.6E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0171 2f376f70dac8c366f036cf7b2209caea 246 Pfam PF07072 Cell division protein 18 224 1.9E-74 T 15-10-2018 IPR009777 Cell division protein ZapD VIBNI_A0171 2f376f70dac8c366f036cf7b2209caea 246 SUPERFAMILY SSF160950 1 245 4.97E-91 T 15-10-2018 IPR036268 ZapD domain superfamily VIBNI_A0171 2f376f70dac8c366f036cf7b2209caea 246 Gene3D G3DSA:1.10.3900.10 12 178 5.1E-83 T 15-10-2018 VIBNI_A0171 2f376f70dac8c366f036cf7b2209caea 246 Gene3D G3DSA:2.60.440.10 6 245 5.1E-83 T 15-10-2018 IPR027462 Z ring-associated protein D, C-terminal VIBNI_A0171 2f376f70dac8c366f036cf7b2209caea 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.163 T 15-10-2018 IPR009777 Cell division protein ZapD VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 PIRSF PIRSF004553 18 198 3.5E-54 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 197 5.5E-61 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 SUPERFAMILY SSF53335 19 195 1.97E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 7.1E-61 T 15-10-2018 VIBNI_A3740 9bf7ec854dafa01a691ac0edd5632ebe 199 Gene3D G3DSA:3.40.50.150 6 199 1.0E-62 T 15-10-2018 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.4E-17 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.4E-17 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.4E-17 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.8E-32 T 15-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 PIRSF PIRSF004669 1 89 1.6E-29 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VIBNI_A0734 197434fc0ac9296c8c692c87d3036b47 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-28 T 15-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 8 436 2.7E-226 T 15-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 Gene3D G3DSA:3.40.50.1100 22 436 9.0E-198 T 15-10-2018 VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 73 395 2.8E-60 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 Gene3D G3DSA:3.40.50.1100 114 236 9.0E-198 T 15-10-2018 VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 SUPERFAMILY SSF53686 72 437 6.55E-54 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 439 264.237 T 15-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VIBNI_B0503 69e88ceebfc47335e9fa2e9f4c12726d 439 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 106 120 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VIBNI_A1019 2c71d23eea790035ef779c71c56339ad 200 SUPERFAMILY SSF47240 56 198 1.46E-37 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A1019 2c71d23eea790035ef779c71c56339ad 200 Pfam PF13668 Ferritin-like domain 59 190 3.4E-35 T 15-10-2018 VIBNI_A1019 2c71d23eea790035ef779c71c56339ad 200 Gene3D G3DSA:1.20.1260.10 51 192 6.9E-13 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A2149 6fcecb7283d92e7b513d4b6b7b1d972f 399 SUPERFAMILY SSF48695 8 323 1.94E-6 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily VIBNI_A2149 6fcecb7283d92e7b513d4b6b7b1d972f 399 Gene3D G3DSA:1.10.760.10 181 274 4.0E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2149 6fcecb7283d92e7b513d4b6b7b1d972f 399 SUPERFAMILY SSF46626 189 263 2.98E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2149 6fcecb7283d92e7b513d4b6b7b1d972f 399 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 194 260 2.2E-5 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A2507 cea1bdc00a8f53615a78f89aa04584d0 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 4.2E-56 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 VIBNI_A2507 cea1bdc00a8f53615a78f89aa04584d0 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.164 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 VIBNI_A2507 cea1bdc00a8f53615a78f89aa04584d0 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 7.0E-60 T 15-10-2018 IPR020911 Uncharacterised protein family UPF0325 VIBNI_A1894 5f8fd0a8fcd9ce1de1990bbb96e80f68 310 Gene3D G3DSA:3.90.550.10 1 255 1.5E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1894 5f8fd0a8fcd9ce1de1990bbb96e80f68 310 Pfam PF00535 Glycosyl transferase family 2 6 125 4.6E-31 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A1894 5f8fd0a8fcd9ce1de1990bbb96e80f68 310 SUPERFAMILY SSF53448 3 236 1.05E-59 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A0869 46a61290d773d4a3f3415759b715e059 566 SUPERFAMILY SSF52540 52 290 2.23E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0869 46a61290d773d4a3f3415759b715e059 566 Gene3D G3DSA:3.40.50.300 27 147 3.1E-5 T 15-10-2018 VIBNI_B1675 a6335ba420e6121cf491f59ca5ba521f 103 Gene3D G3DSA:2.60.120.10 14 103 8.3E-38 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1675 a6335ba420e6121cf491f59ca5ba521f 103 SUPERFAMILY SSF51182 1 103 1.32E-20 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1675 a6335ba420e6121cf491f59ca5ba521f 103 Pfam PF07883 Cupin domain 34 102 1.8E-11 T 15-10-2018 IPR013096 Cupin 2, conserved barrel VIBNI_A3851 ef9ee4eb825f423ab593593b6f7610f1 94 SUPERFAMILY SSF55021 4 75 9.16E-10 T 15-10-2018 VIBNI_A3851 ef9ee4eb825f423ab593593b6f7610f1 94 Gene3D G3DSA:3.30.70.260 1 90 3.9E-11 T 15-10-2018 VIBNI_A3851 ef9ee4eb825f423ab593593b6f7610f1 94 Pfam PF13710 ACT domain 12 73 4.7E-21 T 15-10-2018 VIBNI_A1231 1f48ca9da6901dc8107765504a560c54 149 Pfam PF01575 MaoC like domain 20 121 5.4E-20 T 15-10-2018 IPR002539 MaoC-like dehydratase domain VIBNI_A1231 1f48ca9da6901dc8107765504a560c54 149 Gene3D G3DSA:3.10.129.10 13 144 3.2E-36 T 15-10-2018 VIBNI_A1231 1f48ca9da6901dc8107765504a560c54 149 SUPERFAMILY SSF54637 17 141 2.4E-31 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B0294 2be90bac82774bb629b8b32d9ef36264 405 SUPERFAMILY SSF103473 16 401 1.2E-31 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0294 2be90bac82774bb629b8b32d9ef36264 405 Pfam PF07690 Major Facilitator Superfamily 21 242 7.2E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0294 2be90bac82774bb629b8b32d9ef36264 405 Gene3D G3DSA:1.20.1250.20 13 203 1.7E-13 T 15-10-2018 VIBNI_B0294 2be90bac82774bb629b8b32d9ef36264 405 Gene3D G3DSA:1.20.1250.20 225 403 1.4E-9 T 15-10-2018 VIBNI_B2129 f2fe9a396b091716e0bd0fc2d7c60475 225 Pfam PF07603 Protein of unknown function (DUF1566) 54 202 3.2E-18 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 Pfam PF00171 Aldehyde dehydrogenase family 4 454 3.4E-124 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 Gene3D G3DSA:3.40.309.10 233 425 3.0E-141 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 Gene3D G3DSA:3.40.605.10 5 453 3.0E-141 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A1347 ad26d5ddd5e2e091145f397263be9f25 463 SUPERFAMILY SSF53720 4 458 6.94E-133 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 4.0E-78 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 Gene3D G3DSA:3.20.20.70 1 290 6.4E-84 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 PIRSF PIRSF001359 1 285 5.3E-79 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 8.3E-74 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 SUPERFAMILY SSF51569 2 284 1.61E-78 T 15-10-2018 VIBNI_A0481 d65a97b8b6de070dcc0c1eb1e808fcd5 290 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 SMART SM00304 306 360 1.7E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Pfam PF02743 Cache domain 48 268 1.1E-24 T 15-10-2018 IPR033479 Double Cache domain 1 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 603 1.2E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 SUPERFAMILY SSF58104 328 637 5.62E-74 T 15-10-2018 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Gene3D G3DSA:3.30.450.20 58 280 3.3E-25 T 15-10-2018 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 SUPERFAMILY SSF103190 98 188 9.81E-12 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Gene3D G3DSA:3.30.450.20 68 177 3.3E-25 T 15-10-2018 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 SMART SM00283 375 636 2.9E-65 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Gene3D G3DSA:1.10.287.950 305 638 2.3E-71 T 15-10-2018 VIBNI_B1387 5bca345d262e05bb3dfd787e6270c53f 638 Pfam PF00672 HAMP domain 309 357 7.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 SUPERFAMILY SSF46785 1 87 9.8E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 Pfam PF03466 LysR substrate binding domain 107 287 6.8E-14 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 Gene3D G3DSA:1.10.10.10 1 92 3.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 SUPERFAMILY SSF53850 92 289 5.89E-21 T 15-10-2018 VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1347 72e3e5a6eeb0d336ce70631480c8f13e 292 Gene3D G3DSA:3.40.190.290 93 285 9.4E-36 T 15-10-2018 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 2.4E-17 T 15-10-2018 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 280 292 2.4E-17 T 15-10-2018 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 339 2.4E-17 T 15-10-2018 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 210 2.4E-17 T 15-10-2018 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 Pfam PF02384 N-6 DNA Methylase 150 500 7.4E-85 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 SUPERFAMILY SSF53335 9 541 1.03E-114 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 Gene3D G3DSA:1.20.1260.30 2 144 8.9E-20 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 Pfam PF12161 HsdM N-terminal domain 10 132 1.6E-20 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VIBNI_A2021 dc2e4a232c6b807bc9a8411b05612236 545 Gene3D G3DSA:3.40.50.150 150 444 2.0E-86 T 15-10-2018 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 2.4E-17 T 15-10-2018 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 280 292 2.4E-17 T 15-10-2018 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 339 2.4E-17 T 15-10-2018 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 210 2.4E-17 T 15-10-2018 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 Pfam PF02384 N-6 DNA Methylase 150 500 7.4E-85 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 SUPERFAMILY SSF53335 9 541 1.03E-114 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 Gene3D G3DSA:1.20.1260.30 2 144 8.9E-20 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 Pfam PF12161 HsdM N-terminal domain 10 132 1.6E-20 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VIBNI_A3443 dc2e4a232c6b807bc9a8411b05612236 545 Gene3D G3DSA:3.40.50.150 150 444 2.0E-86 T 15-10-2018 VIBNI_A3058 f9c5a80aaab1d4bb1d70893bf41e1f00 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 2.3E-56 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VIBNI_A3058 f9c5a80aaab1d4bb1d70893bf41e1f00 207 Gene3D G3DSA:3.40.50.1950 1 204 2.9E-76 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VIBNI_A3058 f9c5a80aaab1d4bb1d70893bf41e1f00 207 Pfam PF02441 Flavoprotein 6 182 1.9E-25 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VIBNI_A3058 f9c5a80aaab1d4bb1d70893bf41e1f00 207 SUPERFAMILY SSF52507 6 202 1.44E-56 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VIBNI_A3058 f9c5a80aaab1d4bb1d70893bf41e1f00 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.678 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VIBNI_A3393 8f9127481b793ba802cb08cf5fdb1825 306 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 16 104 3.5E-10 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A3393 8f9127481b793ba802cb08cf5fdb1825 306 SUPERFAMILY SSF69742 4 116 3.79E-14 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A3393 8f9127481b793ba802cb08cf5fdb1825 306 Gene3D G3DSA:3.30.460.30 2 127 9.6E-10 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VIBNI_A1434 1206388a67c4c6050533533ac01a6ae9 375 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 368 5.4E-83 T 15-10-2018 IPR017740 Type VI secretion system-associated, ImpA VIBNI_A1434 1206388a67c4c6050533533ac01a6ae9 375 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 144 4.6E-30 T 15-10-2018 IPR010657 ImpA, N-terminal VIBNI_A3472 b31fe1b66c285b18466470666b3ffe17 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 31 94 9.5E-11 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A3472 b31fe1b66c285b18466470666b3ffe17 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 72 94 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VIBNI_A3472 b31fe1b66c285b18466470666b3ffe17 204 Gene3D G3DSA:1.20.120.1760 11 204 2.9E-36 T 15-10-2018 VIBNI_A2977 cff6da995e0d5c3d75ccf6510875ec75 447 Gene3D G3DSA:3.30.2290.10 3 233 2.6E-85 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VIBNI_A2977 cff6da995e0d5c3d75ccf6510875ec75 447 SUPERFAMILY SSF111283 11 447 4.32E-128 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VIBNI_A2977 cff6da995e0d5c3d75ccf6510875ec75 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.6E-61 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 Gene3D G3DSA:3.40.50.300 270 461 9.6E-40 T 15-10-2018 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 Gene3D G3DSA:3.40.50.300 1 269 2.7E-57 T 15-10-2018 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 SUPERFAMILY SSF52540 260 460 1.54E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 33 46 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 Pfam PF00005 ABC transporter 281 416 1.2E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 SMART SM00382 289 456 0.021 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 SMART SM00382 29 230 8.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 ProSitePatterns PS00211 ABC transporters family signature. 388 402 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 Pfam PF00005 ABC transporter 21 174 4.0E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0902 d9d0bf207756d5121d361748c503ffd6 461 SUPERFAMILY SSF52540 3 254 2.22E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1383 2c7708540cacc71f204c1d912bdd9eb5 384 SUPERFAMILY SSF53383 3 381 7.32E-92 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1383 2c7708540cacc71f204c1d912bdd9eb5 384 Gene3D G3DSA:3.40.640.10 60 274 4.4E-112 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A1383 2c7708540cacc71f204c1d912bdd9eb5 384 Gene3D G3DSA:3.90.1150.10 15 377 4.4E-112 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1383 2c7708540cacc71f204c1d912bdd9eb5 384 Pfam PF00155 Aminotransferase class I and II 26 375 6.9E-33 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A3632 882d175820fe983ae7f7b8e12c3dc25b 390 SUPERFAMILY SSF51261 215 388 6.8E-45 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A3632 882d175820fe983ae7f7b8e12c3dc25b 390 Pfam PF01551 Peptidase family M23 291 384 3.5E-23 T 15-10-2018 IPR016047 Peptidase M23 VIBNI_A3632 882d175820fe983ae7f7b8e12c3dc25b 390 Gene3D G3DSA:2.70.70.10 251 389 1.1E-32 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A2984 096e263e5f6759c03d5681cb4ead1732 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.7E-35 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VIBNI_A2984 096e263e5f6759c03d5681cb4ead1732 162 PIRSF PIRSF018472 1 162 2.2E-44 T 15-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VIBNI_A2984 096e263e5f6759c03d5681cb4ead1732 162 Pfam PF04093 rod shape-determining protein MreD 7 154 4.1E-37 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 Gene3D G3DSA:3.30.420.40 207 376 1.1E-92 T 15-10-2018 VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 Pfam PF00480 ROK family 86 390 7.1E-75 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 Gene3D G3DSA:3.30.420.40 90 384 1.1E-92 T 15-10-2018 VIBNI_A2583 eed7fdd66ba362e51772c7cd79b0aecd 404 SUPERFAMILY SSF53067 85 392 1.61E-60 T 15-10-2018 VIBNI_A3611 2839008804ebd90e2e3fd2e33a83d6c2 80 Gene3D G3DSA:1.20.5.340 1 79 6.4E-29 T 15-10-2018 VIBNI_A3611 2839008804ebd90e2e3fd2e33a83d6c2 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.483 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VIBNI_A3611 2839008804ebd90e2e3fd2e33a83d6c2 80 Pfam PF06005 Cell division protein ZapB 1 78 1.7E-26 T 15-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 Pfam PF12945 Flagellar protein YcgR 37 126 2.7E-12 T 15-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 SUPERFAMILY SSF141371 137 246 2.35E-26 T 15-10-2018 VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 Pfam PF07238 PilZ domain 133 235 9.8E-12 T 15-10-2018 IPR009875 PilZ domain GO:0035438 VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 SUPERFAMILY SSF141371 25 136 1.2E-27 T 15-10-2018 VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 Gene3D G3DSA:2.30.110.10 22 135 1.0E-42 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_B1831 39baf13b2b2a23e534711d0e3d8f46d8 247 Gene3D G3DSA:2.40.10.220 136 247 8.3E-41 T 15-10-2018 VIBNI_A1066 a7b31861075e62f21f699c3d7c0b9f61 163 SUPERFAMILY SSF54523 8 58 7.77E-12 T 15-10-2018 VIBNI_A1066 a7b31861075e62f21f699c3d7c0b9f61 163 Gene3D G3DSA:3.30.700.10 8 158 3.0E-12 T 15-10-2018 VIBNI_A1066 a7b31861075e62f21f699c3d7c0b9f61 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1066 a7b31861075e62f21f699c3d7c0b9f61 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.1E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1066 a7b31861075e62f21f699c3d7c0b9f61 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 4.2E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1780 276cbb0739b03bdbc8b3a49ab528d2e6 172 Gene3D G3DSA:3.10.129.10 2 172 1.0E-65 T 15-10-2018 VIBNI_A1780 276cbb0739b03bdbc8b3a49ab528d2e6 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.989 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1780 276cbb0739b03bdbc8b3a49ab528d2e6 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.5E-94 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1780 276cbb0739b03bdbc8b3a49ab528d2e6 172 Pfam PF07977 FabA-like domain 29 158 1.3E-54 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VIBNI_A1780 276cbb0739b03bdbc8b3a49ab528d2e6 172 SUPERFAMILY SSF54637 4 169 1.86E-56 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B1757 5fc3303d766637c792c22196f6009a02 496 SUPERFAMILY SSF48452 194 322 4.22E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1757 5fc3303d766637c792c22196f6009a02 496 Gene3D G3DSA:1.25.40.10 170 317 5.1E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1757 5fc3303d766637c792c22196f6009a02 496 SUPERFAMILY SSF48452 29 185 6.64E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1757 5fc3303d766637c792c22196f6009a02 496 Gene3D G3DSA:1.25.40.10 18 169 2.5E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1618 00476ce918789ef5d719fd763260a22f 331 Gene3D G3DSA:3.90.550.10 1 221 3.6E-36 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1618 00476ce918789ef5d719fd763260a22f 331 Pfam PF00535 Glycosyl transferase family 2 18 171 2.8E-15 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_B1618 00476ce918789ef5d719fd763260a22f 331 SUPERFAMILY SSF53448 5 258 3.0E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B0591 84b40caa6dab6adc24b4fab75dfd41d2 302 SUPERFAMILY SSF103481 59 156 2.09E-12 T 15-10-2018 VIBNI_B0591 84b40caa6dab6adc24b4fab75dfd41d2 302 Pfam PF00892 EamA-like transporter family 166 299 8.9E-17 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0591 84b40caa6dab6adc24b4fab75dfd41d2 302 Pfam PF00892 EamA-like transporter family 17 153 2.9E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0591 84b40caa6dab6adc24b4fab75dfd41d2 302 SUPERFAMILY SSF103481 224 301 4.32E-10 T 15-10-2018 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 Gene3D G3DSA:1.20.1740.10 2 401 4.2E-13 T 15-10-2018 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 281 300 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 335 354 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 185 207 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 85 105 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 151 171 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 314 332 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 224 243 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 13 36 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 PRINTS PR00166 Aromatic amino acid permease signature 40 59 2.9E-79 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 10 382 1.3E-116 T 15-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 Pfam PF03222 Tryptophan/tyrosine permease family 5 389 1.4E-114 T 15-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VIBNI_B0907 150dda2a93a6bf0184606c1145e236d5 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 20 36 - T 15-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VIBNI_A1150 0597023da18ce5b74139de9435d18930 151 SUPERFAMILY SSF55729 8 144 2.57E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1150 0597023da18ce5b74139de9435d18930 151 Pfam PF00583 Acetyltransferase (GNAT) family 24 129 3.5E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1150 0597023da18ce5b74139de9435d18930 151 Gene3D G3DSA:3.40.630.30 1 151 6.0E-45 T 15-10-2018 VIBNI_A2446 2948a14e2ea8b1352b34135f5e2db5a5 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.0E-9 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2446 2948a14e2ea8b1352b34135f5e2db5a5 307 Gene3D G3DSA:1.10.3720.10 64 305 7.3E-54 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2446 2948a14e2ea8b1352b34135f5e2db5a5 307 SUPERFAMILY SSF161098 68 294 1.15E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 Pfam PF00355 Rieske [2Fe-2S] domain 56 174 1.4E-11 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 4.5E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 4.5E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 4.5E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 Gene3D G3DSA:1.20.5.510 1 40 6.3E-6 T 15-10-2018 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.3E-13 T 15-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 Gene3D G3DSA:2.102.10.10 43 190 1.3E-45 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 SUPERFAMILY SSF50022 30 189 5.84E-43 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VIBNI_A0209 3d3653e27be2f18b5353583bb0f58d0c 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.8E-74 T 15-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VIBNI_A1872 f75cd48f9a8a69a3ca57f8f2417ec2fc 214 Gene3D G3DSA:3.20.20.380 1 213 2.0E-63 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1872 f75cd48f9a8a69a3ca57f8f2417ec2fc 214 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 208 24.331 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1872 f75cd48f9a8a69a3ca57f8f2417ec2fc 214 SUPERFAMILY SSF110395 1 210 4.32E-51 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A1872 f75cd48f9a8a69a3ca57f8f2417ec2fc 214 Pfam PF03932 CutC family 1 206 4.0E-55 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VIBNI_A0304 df72be114bd7bc77124f11b95942e4a4 310 Gene3D G3DSA:1.10.3720.10 57 309 2.0E-47 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0304 df72be114bd7bc77124f11b95942e4a4 310 SUPERFAMILY SSF161098 61 296 1.83E-41 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0304 df72be114bd7bc77124f11b95942e4a4 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 302 3.6E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2776 d3ac7ad7f187d09f502e7e0b7d6ace56 328 SUPERFAMILY SSF47413 18 84 9.85E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A2776 d3ac7ad7f187d09f502e7e0b7d6ace56 328 SMART SM00530 21 82 3.1E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A2776 d3ac7ad7f187d09f502e7e0b7d6ace56 328 Pfam PF13413 Helix-turn-helix domain 22 82 3.6E-19 T 15-10-2018 VIBNI_A2776 d3ac7ad7f187d09f502e7e0b7d6ace56 328 Gene3D G3DSA:1.10.260.40 7 116 2.1E-24 T 15-10-2018 VIBNI_A2776 d3ac7ad7f187d09f502e7e0b7d6ace56 328 Pfam PF13464 Domain of unknown function (DUF4115) 254 327 2.4E-26 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 Gene3D G3DSA:3.90.190.20 231 387 8.9E-37 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 Pfam PF08245 Mur ligase middle domain 6 205 8.9E-32 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 Pfam PF02875 Mur ligase family, glutamate ligase domain 229 312 4.9E-18 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 SUPERFAMILY SSF53244 229 358 1.44E-34 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 4 358 1.9E-78 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 Gene3D G3DSA:3.40.1190.10 1 230 5.0E-41 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_B0312 e0d1fa8ba2b54dbfba6e2c164418ff2a 391 SUPERFAMILY SSF53623 2 208 1.11E-40 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.4E-106 T 15-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 SUPERFAMILY SSF52540 6 233 3.7E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 SMART SM00382 34 216 8.3E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 Gene3D G3DSA:3.40.50.300 3 280 1.1E-64 T 15-10-2018 VIBNI_B0168 e2f7b73b845c5ebbccfae8d7739450fe 282 Pfam PF00005 ABC transporter 25 166 6.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0927 d70dbfd7843ba68568f4acb6104b33ec 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 9.0E-12 T 15-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VIBNI_B0927 d70dbfd7843ba68568f4acb6104b33ec 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 3.1E-30 T 15-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VIBNI_A0919 f407a80676f1a15c97cdae6b8a1ae538 158 SUPERFAMILY SSF55040 11 155 1.23E-61 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0919 f407a80676f1a15c97cdae6b8a1ae538 158 Gene3D G3DSA:3.30.70.640 1 158 7.2E-70 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0919 f407a80676f1a15c97cdae6b8a1ae538 158 Pfam PF01967 MoaC family 15 150 5.9E-56 T 15-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0919 f407a80676f1a15c97cdae6b8a1ae538 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.031 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0919 f407a80676f1a15c97cdae6b8a1ae538 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.4E-71 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 Pfam PF06445 GyrI-like small molecule binding domain 130 283 3.8E-32 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 SUPERFAMILY SSF55136 130 284 7.59E-35 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 Gene3D G3DSA:3.20.80.10 130 284 5.9E-39 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 Pfam PF12833 Helix-turn-helix domain 29 109 3.6E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 Gene3D G3DSA:1.10.10.60 65 120 1.7E-14 T 15-10-2018 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 SMART SM00871 130 284 2.3E-39 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 SUPERFAMILY SSF46689 59 112 1.25E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 Gene3D G3DSA:1.10.10.60 3 64 5.2E-14 T 15-10-2018 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 SUPERFAMILY SSF46689 6 57 1.03E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 7.4E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 7.4E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_B0199 4335eb13b1592d225015067dba6abfd7 284 SMART SM00342 23 107 4.6E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3692 42ab82d7fd4a9a11f3f123fcb21c4129 263 Gene3D G3DSA:3.90.550.10 2 155 9.9E-19 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3692 42ab82d7fd4a9a11f3f123fcb21c4129 263 SUPERFAMILY SSF53448 11 152 3.17E-20 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A3692 42ab82d7fd4a9a11f3f123fcb21c4129 263 Pfam PF00535 Glycosyl transferase family 2 14 112 2.4E-13 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 Gene3D G3DSA:3.40.309.10 248 450 6.8E-157 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 3.0E-202 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 SUPERFAMILY SSF53720 2 483 1.02E-146 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 Pfam PF00171 Aldehyde dehydrogenase family 12 477 2.9E-140 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 Gene3D G3DSA:3.40.605.10 22 458 6.8E-157 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A2098 a0993d4b0712f9712e95a61a6f4566ba 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_A0315 e0aaf7a0f1c5bd82525c9a5552d4874f 436 Pfam PF05525 Branched-chain amino acid transport protein 7 424 2.0E-150 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VIBNI_A0315 e0aaf7a0f1c5bd82525c9a5552d4874f 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 3.4E-134 T 15-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 Gene3D G3DSA:3.40.980.10 2 170 2.0E-50 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 7.8E-85 T 15-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.9E-34 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 PIRSF PIRSF006443 1 166 8.0E-66 T 15-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 2.0E-33 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 SMART SM00852 14 158 7.3E-27 T 15-10-2018 IPR001453 MoaB/Mog domain VIBNI_A0918 71acae0b46d9bee1834df95805f17943 170 SUPERFAMILY SSF53218 7 168 9.95E-47 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily VIBNI_A1693 c1381c59022631a7bceb66280ed974b6 228 SUPERFAMILY SSF52317 32 222 1.51E-39 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1693 c1381c59022631a7bceb66280ed974b6 228 Pfam PF01965 DJ-1/PfpI family 32 202 9.9E-18 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_A1693 c1381c59022631a7bceb66280ed974b6 228 Gene3D G3DSA:3.40.50.880 24 227 6.5E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 3.1E-33 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 SUPERFAMILY SSF53067 5 250 1.54E-68 T 15-10-2018 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 TIGRFAM TIGR01312 XylB: xylulokinase 6 488 6.1E-157 T 15-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 PIRSF PIRSF000538 2 500 1.1E-144 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 Gene3D G3DSA:3.30.420.40 1 247 2.1E-78 T 15-10-2018 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 Gene3D G3DSA:3.30.420.40 249 495 8.0E-82 T 15-10-2018 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 247 2.3E-65 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 SUPERFAMILY SSF53067 249 493 5.89E-63 T 15-10-2018 VIBNI_A1506 cb4bf09a1fc6aff4185f277777f10b08 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A1914 d543158ff8b3592bdeb32fecda59870c 426 SMART SM00327 146 418 2.8E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A VIBNI_A1914 d543158ff8b3592bdeb32fecda59870c 426 SUPERFAMILY SSF53300 140 326 1.29E-16 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 Pfam PF03949 Malic enzyme, NAD binding domain 170 365 1.2E-25 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 SMART SM01274 23 156 5.5E-74 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 SUPERFAMILY SSF51735 168 414 1.25E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 SMART SM00919 168 404 4.9E-140 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 ProSitePatterns PS00331 Malic enzymes signature. 164 180 - T 15-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 Pfam PF00390 Malic enzyme, N-terminal domain 25 155 6.8E-27 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 PIRSF PIRSF000106 43 419 3.1E-72 T 15-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 SUPERFAMILY SSF53223 15 166 7.19E-52 T 15-10-2018 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 Gene3D G3DSA:3.40.50.10380 2 165 9.9E-67 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VIBNI_A3602 4d0a8a7842eecfae2af8c48cef088938 419 Gene3D G3DSA:3.40.50.720 166 419 9.5E-83 T 15-10-2018 VIBNI_A1094 f8f62a83acc266e3974f19933d2848d7 626 SMART SM00283 357 618 1.6E-48 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1094 f8f62a83acc266e3974f19933d2848d7 626 SUPERFAMILY SSF58104 315 626 3.4E-61 T 15-10-2018 VIBNI_A1094 f8f62a83acc266e3974f19933d2848d7 626 Gene3D G3DSA:1.10.287.950 295 611 4.2E-64 T 15-10-2018 VIBNI_A1094 f8f62a83acc266e3974f19933d2848d7 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 590 1.7E-39 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1094 f8f62a83acc266e3974f19933d2848d7 626 SMART SM00304 295 349 1.2E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3597 94474fb4544b1f05c92207d6fb462dd0 179 Gene3D G3DSA:1.10.10.10 1 89 1.1E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3597 94474fb4544b1f05c92207d6fb462dd0 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 5.0E-15 T 15-10-2018 IPR005149 Transcription regulator PadR, N-terminal VIBNI_A3597 94474fb4544b1f05c92207d6fb462dd0 179 Pfam PF10400 Virulence activator alpha C-term 92 176 1.5E-14 T 15-10-2018 IPR018309 Transcription regulator PadR, C-terminal VIBNI_A3597 94474fb4544b1f05c92207d6fb462dd0 179 SUPERFAMILY SSF46785 3 178 4.39E-43 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2349 c918185963126e34256e16db6b75c2ac 284 Gene3D G3DSA:3.40.50.1980 25 144 4.1E-33 T 15-10-2018 VIBNI_A2349 c918185963126e34256e16db6b75c2ac 284 Gene3D G3DSA:3.40.50.1980 145 284 2.3E-43 T 15-10-2018 VIBNI_A2349 c918185963126e34256e16db6b75c2ac 284 SUPERFAMILY SSF53807 28 284 3.22E-46 T 15-10-2018 VIBNI_A2349 c918185963126e34256e16db6b75c2ac 284 Pfam PF01497 Periplasmic binding protein 30 259 8.6E-37 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_B1596 7255dafa7574014f000adba38fcc8c82 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 188 1.3E-27 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_B1596 7255dafa7574014f000adba38fcc8c82 204 SUPERFAMILY SSF56529 11 189 5.1E-46 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B1596 7255dafa7574014f000adba38fcc8c82 204 Gene3D G3DSA:3.90.850.10 7 204 3.9E-47 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A2912 869219f6103758b1815a9cc844e4f656 261 Pfam PF04784 Protein of unknown function, DUF547 91 198 1.4E-22 T 15-10-2018 IPR006869 Domain of unknown function DUF547 VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 SUPERFAMILY SSF52540 95 314 1.94E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 63 309 4.7E-50 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 Gene3D G3DSA:3.40.50.300 81 252 6.7E-45 T 15-10-2018 VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 29 316 31.184 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 Pfam PF03193 RsgA GTPase 79 252 1.2E-47 T 15-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VIBNI_B1572 0172adc71f881d7d6a875b1951e83712 347 Gene3D G3DSA:1.10.40.50 255 325 2.5E-21 T 15-10-2018 VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 Gene3D G3DSA:3.40.50.300 1 217 9.5E-75 T 15-10-2018 VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 SMART SM00490 258 339 3.8E-31 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 SMART SM00487 20 229 4.5E-56 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 Gene3D G3DSA:3.40.50.300 218 381 1.6E-48 T 15-10-2018 VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 Pfam PF00270 DEAD/DEAH box helicase 25 195 8.1E-52 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 SUPERFAMILY SSF52540 76 357 1.36E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0937 d810ec3c03051a645c23c170ea17d0cb 429 Pfam PF00271 Helicase conserved C-terminal domain 231 339 8.1E-29 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B0971 4bb2cd7969fb66de595a47fa79deedac 297 Pfam PF05661 Protein of unknown function (DUF808) 5 286 5.4E-115 T 15-10-2018 IPR008526 Inner membrane protein YedI VIBNI_B0971 4bb2cd7969fb66de595a47fa79deedac 297 PIRSF PIRSF016660 1 297 3.7E-121 T 15-10-2018 IPR008526 Inner membrane protein YedI VIBNI_A2036 d68244259f792f10c115c4cbaeca1603 537 SUPERFAMILY SSF141523 289 448 4.32E-19 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VIBNI_A2036 d68244259f792f10c115c4cbaeca1603 537 Pfam PF01471 Putative peptidoglycan binding domain 214 263 3.0E-8 T 15-10-2018 IPR002477 Peptidoglycan binding-like VIBNI_A2036 d68244259f792f10c115c4cbaeca1603 537 SUPERFAMILY SSF47090 199 272 2.59E-11 T 15-10-2018 IPR036365 PGBD-like superfamily VIBNI_A2036 d68244259f792f10c115c4cbaeca1603 537 Pfam PF03734 L,D-transpeptidase catalytic domain 291 459 2.6E-28 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VIBNI_A0585 b8ae6e74f3a8f48937310235540d48fe 90 Gene3D G3DSA:1.20.58.1000 1 90 1.8E-28 T 15-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily VIBNI_A0585 b8ae6e74f3a8f48937310235540d48fe 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 85 3.8E-23 T 15-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 VIBNI_B1895 504585b51718fa83ed937f1b6aa090a1 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 42 174 5.9E-37 T 15-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VIBNI_B1895 504585b51718fa83ed937f1b6aa090a1 177 Gene3D G3DSA:3.90.280.10 9 177 9.8E-54 T 15-10-2018 IPR036610 PEBP-like superfamily VIBNI_B1895 504585b51718fa83ed937f1b6aa090a1 177 SUPERFAMILY SSF49777 20 176 1.06E-49 T 15-10-2018 IPR036610 PEBP-like superfamily VIBNI_B1895 504585b51718fa83ed937f1b6aa090a1 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 174 4.6E-39 T 15-10-2018 IPR005247 YbhB/YbcL VIBNI_B0117 13218d6d4a451eb6201063cb1792fdc4 360 Pfam PF01694 Rhomboid family 192 339 4.8E-36 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VIBNI_B0117 13218d6d4a451eb6201063cb1792fdc4 360 Pfam PF13453 Transcription factor zinc-finger 4 44 4.3E-10 T 15-10-2018 IPR027392 Transcription factor zinc-finger VIBNI_B0117 13218d6d4a451eb6201063cb1792fdc4 360 Pfam PF13453 Transcription factor zinc-finger 69 109 6.0E-8 T 15-10-2018 IPR027392 Transcription factor zinc-finger VIBNI_B0117 13218d6d4a451eb6201063cb1792fdc4 360 Gene3D G3DSA:1.20.1540.10 146 346 1.2E-37 T 15-10-2018 IPR035952 Rhomboid-like superfamily VIBNI_B0117 13218d6d4a451eb6201063cb1792fdc4 360 SUPERFAMILY SSF144091 149 338 1.05E-43 T 15-10-2018 VIBNI_B0543 5bf95db86254bb3ad4b70611e01a6631 207 Pfam PF01292 Prokaryotic cytochrome b561 4 170 8.0E-23 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VIBNI_B0543 5bf95db86254bb3ad4b70611e01a6631 207 SUPERFAMILY SSF81342 2 171 5.89E-33 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VIBNI_B0543 5bf95db86254bb3ad4b70611e01a6631 207 Gene3D G3DSA:1.20.950.20 1 158 4.8E-16 T 15-10-2018 VIBNI_A0982 0d64f135c7a9f0d3ed7870c5c0549d26 220 SUPERFAMILY SSF48371 13 210 1.7E-39 T 15-10-2018 IPR016024 Armadillo-type fold VIBNI_A0982 0d64f135c7a9f0d3ed7870c5c0549d26 220 Pfam PF08713 DNA alkylation repair enzyme 21 209 3.7E-36 T 15-10-2018 IPR014825 DNA alkylation repair enzyme VIBNI_A0982 0d64f135c7a9f0d3ed7870c5c0549d26 220 Gene3D G3DSA:1.25.10.90 15 218 7.5E-39 T 15-10-2018 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 Gene3D G3DSA:1.10.287.10 2 89 4.3E-36 T 15-10-2018 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 SUPERFAMILY SSF47060 3 89 1.15E-35 T 15-10-2018 IPR009068 S15/NS1, RNA-binding VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 SMART SM01387 8 88 2.8E-53 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.056 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-28 T 15-10-2018 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.5E-39 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2794 36ff6ad505d5f5632a6e108cde483661 89 Pfam PF00312 Ribosomal protein S15 8 88 2.4E-37 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A1155 22997e54c9c013c1284eab6e19ec7528 324 Pfam PF14765 Polyketide synthase dehydratase 28 304 1.9E-17 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VIBNI_A1155 22997e54c9c013c1284eab6e19ec7528 324 Gene3D G3DSA:3.10.129.110 31 301 1.2E-15 T 15-10-2018 VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 Gene3D G3DSA:3.40.50.300 8 255 3.4E-56 T 15-10-2018 VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 SUPERFAMILY SSF52540 20 241 1.59E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 SMART SM00382 293 486 9.1E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 SMART SM00382 44 232 1.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 Gene3D G3DSA:3.40.50.300 259 503 6.4E-50 T 15-10-2018 VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 SUPERFAMILY SSF52540 260 488 4.83E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 Pfam PF00005 ABC transporter 285 437 4.7E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0672 2c1047b6c1176b2e4009a62f33ab9592 507 Pfam PF00005 ABC transporter 35 184 1.2E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2205 1da2d6af47761397662a10423aef4eb5 817 Pfam PF02687 FtsX-like permease family 271 368 8.9E-7 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A2205 1da2d6af47761397662a10423aef4eb5 817 Pfam PF02687 FtsX-like permease family 715 809 2.5E-8 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 SUPERFAMILY SSF51905 4 262 1.94E-27 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 Gene3D G3DSA:3.50.50.60 148 273 1.1E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 312 2.2E-87 T 15-10-2018 VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 Gene3D G3DSA:3.50.50.60 6 373 1.1E-125 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 6.1E-6 T 15-10-2018 VIBNI_A1697 d686aa1da1407f7e8b293ab2244dd7de 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 134 149 6.1E-6 T 15-10-2018 VIBNI_B0644 c5c45f3e1e61877b02c05fd0fd488c3f 211 Pfam PF01810 LysE type translocator 16 204 3.3E-25 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0644 c5c45f3e1e61877b02c05fd0fd488c3f 211 PIRSF PIRSF006324 1 207 3.8E-53 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 Gene3D G3DSA:3.40.50.300 26 306 3.3E-41 T 15-10-2018 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 SUPERFAMILY SSF52540 198 665 3.55E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 Pfam PF13307 Helicase C-terminal domain 526 684 2.5E-36 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 Gene3D G3DSA:3.40.50.300 499 688 3.0E-34 T 15-10-2018 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 SUPERFAMILY SSF52540 19 666 1.44E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.38 T 15-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 Pfam PF06733 DEAD_2 115 263 2.8E-5 T 15-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VIBNI_A2300 8b11ceb339e707a608e0babf08c1a8e7 691 SMART SM00491 526 671 2.5E-28 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VIBNI_A2566 1bc3f40018e76095146aba328a91838f 114 Gene3D G3DSA:1.20.1300.10 1 114 3.5E-28 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2566 1bc3f40018e76095146aba328a91838f 114 SUPERFAMILY SSF81343 4 113 2.18E-24 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VIBNI_A2566 1bc3f40018e76095146aba328a91838f 114 PIRSF PIRSF000169 1 114 4.0E-36 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VIBNI_A2566 1bc3f40018e76095146aba328a91838f 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.6E-32 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VIBNI_A0629 adce46c990bb5973b6c89327f0f61c60 120 Gene3D G3DSA:3.30.700.10 2 120 2.0E-19 T 15-10-2018 VIBNI_A0629 adce46c990bb5973b6c89327f0f61c60 120 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 22 107 1.1E-17 T 15-10-2018 IPR031982 Type IV minor pilin ComP VIBNI_A0629 adce46c990bb5973b6c89327f0f61c60 120 SUPERFAMILY SSF54523 1 114 3.24E-19 T 15-10-2018 VIBNI_A0629 adce46c990bb5973b6c89327f0f61c60 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 21 5.9E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1570 c941d56683877140ada78b4bf3c1c2e6 164 Gene3D G3DSA:3.30.2010.10 69 162 1.0E-7 T 15-10-2018 VIBNI_A1570 c941d56683877140ada78b4bf3c1c2e6 164 Pfam PF01863 Protein of unknown function DUF45 94 150 1.5E-11 T 15-10-2018 IPR002725 Protein of unknown function DUF45 VIBNI_B1883 cfd32c3922f1fa693316928dfb3fe585 211 SMART SM00671 127 162 0.099 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1883 cfd32c3922f1fa693316928dfb3fe585 211 SMART SM00671 163 194 27.0 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1883 cfd32c3922f1fa693316928dfb3fe585 211 SUPERFAMILY SSF81901 127 202 1.57E-12 T 15-10-2018 VIBNI_B1883 cfd32c3922f1fa693316928dfb3fe585 211 Gene3D G3DSA:1.25.40.10 115 210 4.7E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1628 2290dac43234e63c4492aa376d17b013 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 285 4.6E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1628 2290dac43234e63c4492aa376d17b013 296 SUPERFAMILY SSF161098 10 296 1.21E-66 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1628 2290dac43234e63c4492aa376d17b013 296 Gene3D G3DSA:1.10.3720.10 2 283 2.3E-71 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 Gene3D G3DSA:3.40.50.300 2 330 2.1E-75 T 15-10-2018 VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 SUPERFAMILY SSF52540 3 268 2.81E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 Pfam PF00005 ABC transporter 24 187 5.3E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.1E-14 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 SMART SM00382 32 237 1.1E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1356 78af5ccbcae3484cfcdd48e583bf8a4e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 2.0E-20 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 PIRSF PIRSF012524 1 278 4.5E-101 T 15-10-2018 IPR014464 Conserved virulence factor B VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 Gene3D G3DSA:1.10.10.10 215 277 1.2E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 SMART SM00316 3 64 11.0 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 SMART SM00316 69 132 1.4 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 SMART SM00316 145 207 0.081 T 15-10-2018 IPR022967 RNA-binding domain, S1 VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 Pfam PF13509 S1 domain 71 132 5.9E-5 T 15-10-2018 IPR039566 Conserved virulence factor B, S1 domain VIBNI_A1799 ff582eb8164779956d674b135892ace6 278 Pfam PF13509 S1 domain 4 63 6.8E-23 T 15-10-2018 IPR039566 Conserved virulence factor B, S1 domain VIBNI_A0078 336783c085cdc389d5f521382de42216 341 Gene3D G3DSA:1.10.3470.10 9 340 2.3E-94 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0078 336783c085cdc389d5f521382de42216 341 Pfam PF01032 FecCD transport family 22 335 3.2E-89 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0078 336783c085cdc389d5f521382de42216 341 SUPERFAMILY SSF81345 12 335 8.24E-75 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A2347 7f3d5434065fc6e65991a990facc91a6 168 Pfam PF06228 Haem utilisation ChuX/HutX 26 163 1.6E-35 T 15-10-2018 IPR010413 Heme utilization carrier protein HutX-like VIBNI_A2347 7f3d5434065fc6e65991a990facc91a6 168 Gene3D G3DSA:3.40.1570.10 1 168 3.6E-62 T 15-10-2018 VIBNI_A2347 7f3d5434065fc6e65991a990facc91a6 168 PIRSF PIRSF030840 1 168 1.8E-67 T 15-10-2018 IPR010413 Heme utilization carrier protein HutX-like VIBNI_A2347 7f3d5434065fc6e65991a990facc91a6 168 SUPERFAMILY SSF144064 2 167 3.53E-58 T 15-10-2018 VIBNI_A2347 7f3d5434065fc6e65991a990facc91a6 168 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 10 163 4.5E-64 T 15-10-2018 IPR010413 Heme utilization carrier protein HutX-like VIBNI_B0995 91a32363817ae2c3f6afa53f07b6315f 294 Pfam PF13407 Periplasmic binding protein domain 35 278 4.3E-50 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0995 91a32363817ae2c3f6afa53f07b6315f 294 Gene3D G3DSA:3.40.50.2300 36 278 9.8E-68 T 15-10-2018 VIBNI_B0995 91a32363817ae2c3f6afa53f07b6315f 294 Gene3D G3DSA:3.40.50.2300 127 260 9.8E-68 T 15-10-2018 VIBNI_B0995 91a32363817ae2c3f6afa53f07b6315f 294 SUPERFAMILY SSF53822 28 292 1.29E-66 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1101 a1e3d7621f7f71210d943fafdd16ac54 279 Gene3D G3DSA:2.60.120.330 1 279 6.6E-97 T 15-10-2018 IPR027443 Isopenicillin N synthase-like VIBNI_B1101 a1e3d7621f7f71210d943fafdd16ac54 279 SUPERFAMILY SSF51197 7 276 1.3E-63 T 15-10-2018 VIBNI_B1101 a1e3d7621f7f71210d943fafdd16ac54 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 151 253 5.6E-16 T 15-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VIBNI_B1101 a1e3d7621f7f71210d943fafdd16ac54 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 10 95 5.9E-11 T 15-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VIBNI_B1586 20244d5d68e50676bb1854f1ecd8804c 318 SUPERFAMILY SSF64182 5 317 5.36E-44 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 SUPERFAMILY SSF46785 12 80 3.17E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 SUPERFAMILY SSF55781 89 253 1.08E-41 T 15-10-2018 VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 Gene3D G3DSA:1.10.10.10 4 81 9.3E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 SMART SM00346 10 99 0.0083 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 Pfam PF09339 IclR helix-turn-helix domain 13 62 5.8E-9 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 Gene3D G3DSA:3.30.450.40 86 256 3.6E-41 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B2097 044dd50f2230f30bd1a8e6ad599a3a89 259 Pfam PF01614 Bacterial transcriptional regulator 127 250 3.4E-23 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 SUPERFAMILY SSF51604 143 429 1.05E-125 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 6.3E-206 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 Gene3D G3DSA:3.30.390.10 1 127 2.0E-54 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 Gene3D G3DSA:3.20.20.120 128 433 4.4E-132 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 Hamap MF_00318 Enolase [eno]. 2 417 44.327 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 SUPERFAMILY SSF54826 3 138 3.54E-56 T 15-10-2018 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 SMART SM01193 4 134 1.4E-91 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PIRSF PIRSF001400 1 431 2.4E-191 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 Pfam PF03952 Enolase, N-terminal domain 4 134 6.4E-58 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.5E-136 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_A0129 1cc225d27eff776265f4f400d947eba2 433 SMART SM01192 143 431 2.3E-212 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VIBNI_B0334 f70686bdd107d48658ec69d0a7a908be 513 Pfam PF05488 PAAR motif 46 90 6.6E-8 T 15-10-2018 IPR008727 PAAR motif VIBNI_B0334 f70686bdd107d48658ec69d0a7a908be 513 Pfam PF05488 PAAR motif 58 114 5.3E-8 T 15-10-2018 IPR008727 PAAR motif VIBNI_B0334 f70686bdd107d48658ec69d0a7a908be 513 Pfam PF05488 PAAR motif 3 44 1.7E-7 T 15-10-2018 IPR008727 PAAR motif VIBNI_B0334 f70686bdd107d48658ec69d0a7a908be 513 SUPERFAMILY SSF53474 293 434 6.02E-10 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0334 f70686bdd107d48658ec69d0a7a908be 513 Gene3D G3DSA:2.60.200.60 2 119 1.6E-35 T 15-10-2018 VIBNI_A3583 0298378891cbee81d23b03da0597a878 195 PIRSF PIRSF016482 1 195 9.1E-68 T 15-10-2018 IPR007445 Pilus assembly protein, PilO VIBNI_A3583 0298378891cbee81d23b03da0597a878 195 Pfam PF04350 Pilus assembly protein, PilO 47 189 2.6E-47 T 15-10-2018 IPR007445 Pilus assembly protein, PilO VIBNI_A3583 0298378891cbee81d23b03da0597a878 195 Gene3D G3DSA:3.30.70.60 92 195 4.9E-27 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VIBNI_A0964 891a982f28b519b20d1e135eca933ae4 317 Gene3D G3DSA:1.10.3720.10 86 304 6.3E-29 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0964 891a982f28b519b20d1e135eca933ae4 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 2.3E-41 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0964 891a982f28b519b20d1e135eca933ae4 317 SUPERFAMILY SSF161098 91 300 4.45E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1081 a0ac1cb79b74a142662ca4fd590312f4 249 SUPERFAMILY SSF53448 3 247 8.21E-66 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1081 a0ac1cb79b74a142662ca4fd590312f4 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.619 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VIBNI_A1081 a0ac1cb79b74a142662ca4fd590312f4 249 Gene3D G3DSA:3.90.550.10 1 249 1.6E-97 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1081 a0ac1cb79b74a142662ca4fd590312f4 249 Pfam PF02348 Cytidylyltransferase 5 221 7.7E-69 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VIBNI_A1081 a0ac1cb79b74a142662ca4fd590312f4 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 8.2E-113 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VIBNI_B0102 107c83e057f799527811c7d3ba922cf0 479 Pfam PF00939 Sodium:sulfate symporter transmembrane region 30 478 2.2E-39 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VIBNI_B0624 149e5e98cedd6ef961f4d72415460a31 435 Gene3D G3DSA:3.30.559.30 213 435 8.5E-32 T 15-10-2018 VIBNI_B0624 149e5e98cedd6ef961f4d72415460a31 435 SUPERFAMILY SSF52777 14 188 1.45E-24 T 15-10-2018 VIBNI_B0624 149e5e98cedd6ef961f4d72415460a31 435 Gene3D G3DSA:3.30.559.10 13 210 9.5E-37 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B0624 149e5e98cedd6ef961f4d72415460a31 435 SUPERFAMILY SSF52777 195 410 6.0E-18 T 15-10-2018 VIBNI_B0624 149e5e98cedd6ef961f4d72415460a31 435 Pfam PF00668 Condensation domain 11 358 3.5E-37 T 15-10-2018 IPR001242 Condensation domain VIBNI_B0166 81841193d94aeb0919fcfa28b03c0a9c 478 Gene3D G3DSA:3.40.190.10 143 461 8.3E-142 T 15-10-2018 VIBNI_B0166 81841193d94aeb0919fcfa28b03c0a9c 478 Gene3D G3DSA:3.40.190.10 58 456 8.3E-142 T 15-10-2018 VIBNI_B0166 81841193d94aeb0919fcfa28b03c0a9c 478 SUPERFAMILY SSF53850 58 360 5.76E-19 T 15-10-2018 VIBNI_B0166 81841193d94aeb0919fcfa28b03c0a9c 478 Pfam PF13379 NMT1-like family 52 332 7.3E-108 T 15-10-2018 VIBNI_A3321 94548ec6712df148f87a55fc8ec515f2 193 SMART SM00987 30 186 7.7E-29 T 15-10-2018 VIBNI_A3321 94548ec6712df148f87a55fc8ec515f2 193 SMART SM00986 30 186 7.7E-29 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A3321 94548ec6712df148f87a55fc8ec515f2 193 Gene3D G3DSA:3.40.470.10 2 193 4.8E-68 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A3321 94548ec6712df148f87a55fc8ec515f2 193 SUPERFAMILY SSF52141 6 191 5.56E-55 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A3321 94548ec6712df148f87a55fc8ec515f2 193 Pfam PF03167 Uracil DNA glycosylase superfamily 34 180 3.9E-24 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.95 T 15-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 SUPERFAMILY SSF51395 1 312 3.48E-72 T 15-10-2018 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 284 5.2E-77 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 Gene3D G3DSA:3.20.20.70 1 242 7.1E-78 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 PIRSF PIRSF006621 1 316 2.9E-73 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VIBNI_A2395 3858c5acd176af91e78964c5f93dff56 318 Gene3D G3DSA:1.20.225.30 243 313 1.1E-27 T 15-10-2018 VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 Pfam PF02779 Transketolase, pyrimidine binding domain 4 188 1.9E-51 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 SUPERFAMILY SSF52922 198 333 1.44E-39 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 SMART SM00861 5 189 1.1E-59 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 Gene3D G3DSA:3.40.50.920 202 335 1.2E-46 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 SUPERFAMILY SSF52518 2 213 3.0E-62 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 Gene3D G3DSA:3.40.50.970 3 201 2.9E-79 T 15-10-2018 VIBNI_A0878 7d5197d1d01c7c95c9eba1db48596a80 337 Pfam PF02780 Transketolase, C-terminal domain 203 325 5.1E-40 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_A1723 18bf1e08f9aed5236ee8b6e4334e2cd1 406 SUPERFAMILY SSF111352 17 384 4.05E-98 T 15-10-2018 VIBNI_A1723 18bf1e08f9aed5236ee8b6e4334e2cd1 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VIBNI_A1723 18bf1e08f9aed5236ee8b6e4334e2cd1 406 Gene3D G3DSA:1.10.3430.10 2 405 2.5E-103 T 15-10-2018 IPR029020 Ammonium/urea transporter VIBNI_A1723 18bf1e08f9aed5236ee8b6e4334e2cd1 406 Pfam PF00909 Ammonium Transporter Family 23 399 3.6E-91 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 Gene3D G3DSA:3.40.30.10 1 77 1.6E-23 T 15-10-2018 VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 200 3.9E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.9E-14 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 Gene3D G3DSA:1.20.1050.10 83 199 6.0E-29 T 15-10-2018 VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 SUPERFAMILY SSF47616 80 203 6.13E-23 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A1569 913f93a615595ae59033bb24e28a667c 204 SUPERFAMILY SSF52833 1 89 8.53E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 SUPERFAMILY SSF53807 22 291 3.43E-93 T 15-10-2018 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 23 44 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 204 222 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 227 244 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 48 66 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 249 267 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 178 195 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00691 Adhesin B signature 67 86 1.5E-39 T 15-10-2018 IPR006129 Adhesin B GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 23 41 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 257 276 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 231 249 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 67 84 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 54 67 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 PRINTS PR00690 Adhesin family signature 178 199 2.3E-46 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 Gene3D G3DSA:3.40.50.1980 180 291 9.8E-42 T 15-10-2018 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 288 2.0E-78 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VIBNI_B0031 fa89a343256ab74dcfbd1624ebe80d30 293 Gene3D G3DSA:3.40.50.1980 22 179 3.5E-57 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 297 2.5E-103 T 15-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 Pfam PF10135 Rod binding protein 54 103 5.2E-15 T 15-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 32 55 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 80 102 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 215 236 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 150 173 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 237 258 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 280 298 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 PRINTS PR01002 Flagellar protein FlgJ signature 174 192 5.0E-30 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 Gene3D G3DSA:1.10.530.10 152 298 8.4E-47 T 15-10-2018 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 SMART SM00047 140 301 1.4E-49 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.5E-21 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VIBNI_A2633 74e84e9911cab357fa827da89c0eabca 303 SUPERFAMILY SSF53955 123 192 2.06E-5 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 SUPERFAMILY SSF50993 2 400 1.83E-88 T 15-10-2018 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 SUPERFAMILY SSF53474 416 669 3.07E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 501 520 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 587 602 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 497 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 531 551 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 447 465 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 1.3E-59 T 15-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 508 538 - T 15-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 402 2.0E-117 T 15-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 Pfam PF00326 Prolyl oligopeptidase family 462 677 6.8E-70 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 Gene3D G3DSA:2.130.10.120 71 407 1.6E-247 T 15-10-2018 VIBNI_B1782 5f99c7e140842eae5d1ce92e5d042816 682 Gene3D G3DSA:3.40.50.1820 13 646 1.6E-247 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0904 9b448f19b49dca34263eb331c9038adf 603 Pfam PF01966 HD domain 420 542 1.4E-15 T 15-10-2018 IPR006674 HD domain VIBNI_B0904 9b448f19b49dca34263eb331c9038adf 603 Gene3D G3DSA:1.10.3210.10 395 596 1.5E-65 T 15-10-2018 VIBNI_B0904 9b448f19b49dca34263eb331c9038adf 603 SMART SM00471 415 552 1.1E-9 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_B0904 9b448f19b49dca34263eb331c9038adf 603 SUPERFAMILY SSF109604 411 583 5.02E-35 T 15-10-2018 VIBNI_A1298 dd417e265058ee54ce477a9f967a7650 697 SUPERFAMILY SSF141868 453 690 1.01E-61 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A1298 dd417e265058ee54ce477a9f967a7650 697 Pfam PF00563 EAL domain 452 677 1.0E-57 T 15-10-2018 IPR001633 EAL domain VIBNI_A1298 dd417e265058ee54ce477a9f967a7650 697 Pfam PF02378 Phosphotransferase system, EIIC 35 336 5.1E-13 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A1298 dd417e265058ee54ce477a9f967a7650 697 SMART SM00052 443 683 4.2E-57 T 15-10-2018 IPR001633 EAL domain VIBNI_A1298 dd417e265058ee54ce477a9f967a7650 697 Gene3D G3DSA:3.20.20.450 448 697 1.6E-65 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_A2226 68edc79471e5b98249bc77da60c0dbd1 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 3.4E-18 T 15-10-2018 IPR025346 Protein of unknown function DUF4250 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 SUPERFAMILY SSF63829 250 451 1.83E-13 T 15-10-2018 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 SMART SM00342 1046 1128 1.4E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Pfam PF12833 Helix-turn-helix domain 1053 1128 7.5E-23 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Pfam PF07494 Two component regulator propeller 285 306 0.0018 T 15-10-2018 IPR011110 Two component regulator propeller VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:2.60.40.10 664 732 1.1E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 SUPERFAMILY SSF63825 64 308 1.15E-5 T 15-10-2018 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:1.10.10.60 1028 1078 2.5E-10 T 15-10-2018 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:1.10.10.60 1079 1131 3.8E-17 T 15-10-2018 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 SUPERFAMILY SSF46689 1083 1129 2.37E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:2.130.10.10 335 613 1.9E-33 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 SUPERFAMILY SSF55874 849 959 5.65E-7 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:3.30.565.10 846 980 2.0E-6 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1083 1124 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 Gene3D G3DSA:2.130.10.10 32 316 4.8E-28 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1112 1128 1.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A2549 580f3461a7ae1f14a6953ef03c80d3bd 1134 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1097 1112 1.3E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0143 ee4942aafc4798f9aeb68fad46f5766a 236 Pfam PF13091 PLD-like domain 102 225 7.4E-30 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VIBNI_A0143 ee4942aafc4798f9aeb68fad46f5766a 236 SUPERFAMILY SSF56024 91 226 6.06E-31 T 15-10-2018 VIBNI_A0143 ee4942aafc4798f9aeb68fad46f5766a 236 Gene3D G3DSA:3.30.870.10 88 233 6.1E-51 T 15-10-2018 VIBNI_B1971 26a1ddd2e85f377207a33063e4015eb6 685 Gene3D G3DSA:1.10.443.10 324 532 7.0E-6 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_B1971 26a1ddd2e85f377207a33063e4015eb6 685 SUPERFAMILY SSF56349 346 501 6.28E-7 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A0336 26a1ddd2e85f377207a33063e4015eb6 685 Gene3D G3DSA:1.10.443.10 324 532 7.0E-6 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A0336 26a1ddd2e85f377207a33063e4015eb6 685 SUPERFAMILY SSF56349 346 501 6.28E-7 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A2603 ca2887f729d3273cd3b4d67007dd95d4 178 Pfam PF17323 Trans-membrane regulatory protein ToxS 23 176 1.2E-59 T 15-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VIBNI_A2603 ca2887f729d3273cd3b4d67007dd95d4 178 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 5 178 5.0E-52 T 15-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 PIRSF PIRSF000429 8 435 1.2E-116 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.799 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 7.7E-63 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 435 8.0E-258 T 15-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 SUPERFAMILY SSF53901 14 294 3.76E-60 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.2E-127 T 15-10-2018 IPR002155 Thiolase GO:0016747 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 Gene3D G3DSA:3.40.47.10 5 434 6.5E-110 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 Pfam PF02803 Thiolase, C-terminal domain 296 433 1.1E-34 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VIBNI_A0765 8db4d58fa4580462dd14c1b425002e9a 435 SUPERFAMILY SSF53901 296 434 2.04E-31 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A3619 85c86f3468d1384fc285b3584b5ea3fb 429 PIRSF PIRSF006066 5 428 6.1E-113 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3619 85c86f3468d1384fc285b3584b5ea3fb 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 422 1.1E-99 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3619 85c86f3468d1384fc285b3584b5ea3fb 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 5 417 1.0E-94 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0435 e1be63ef14a6391a1b880b94ca525092 228 Pfam PF03737 Aldolase/RraA 34 185 3.8E-36 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_B0435 e1be63ef14a6391a1b880b94ca525092 228 SUPERFAMILY SSF89562 32 194 3.27E-38 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_B0435 e1be63ef14a6391a1b880b94ca525092 228 Gene3D G3DSA:3.50.30.100 2 208 8.7E-50 T 15-10-2018 VIBNI_A1961 f468c27723a9e535bbcde4d2bad2592a 632 SUPERFAMILY SSF63829 296 599 6.54E-14 T 15-10-2018 VIBNI_A1961 f468c27723a9e535bbcde4d2bad2592a 632 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 27 53 1.9E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_A1961 f468c27723a9e535bbcde4d2bad2592a 632 Pfam PF05787 Bacterial protein of unknown function (DUF839) 66 599 3.1E-194 T 15-10-2018 IPR008557 Protein of unknown function DUF839 VIBNI_A2105 b4469bb8420f114e551d5111b11628da 227 Gene3D G3DSA:1.10.10.2250 1 69 1.2E-32 T 15-10-2018 VIBNI_A2105 b4469bb8420f114e551d5111b11628da 227 Gene3D G3DSA:1.10.10.2260 79 185 2.3E-49 T 15-10-2018 VIBNI_A2105 b4469bb8420f114e551d5111b11628da 227 Pfam PF04288 MukE-like family 1 222 1.1E-119 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VIBNI_A2105 b4469bb8420f114e551d5111b11628da 227 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 1 226 49.115 T 15-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VIBNI_A3386 b69bf46804b50f5d9d05f912c74389d6 144 Gene3D G3DSA:3.50.80.10 1 144 2.9E-56 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VIBNI_A3386 b69bf46804b50f5d9d05f912c74389d6 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 5.8E-66 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VIBNI_A3386 b69bf46804b50f5d9d05f912c74389d6 144 SUPERFAMILY SSF69500 1 143 1.57E-55 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VIBNI_A3386 b69bf46804b50f5d9d05f912c74389d6 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.048 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VIBNI_A3386 b69bf46804b50f5d9d05f912c74389d6 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.4E-53 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SUPERFAMILY SSF46689 141 188 1.57E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SUPERFAMILY SSF55945 198 292 7.38E-24 T 15-10-2018 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SUPERFAMILY SSF48150 301 450 3.49E-29 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 182 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Gene3D G3DSA:1.10.1670.10 413 454 1.6E-5 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SUPERFAMILY SSF46689 89 136 4.12E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Gene3D G3DSA:1.10.10.60 83 192 3.1E-24 T 15-10-2018 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SMART SM01009 197 310 9.8E-35 T 15-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SMART SM00342 103 186 1.0E-21 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SUPERFAMILY SSF57884 4 85 3.01E-32 T 15-10-2018 IPR035451 Ada-like domain superfamily VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Pfam PF06029 AlkA N-terminal domain 198 310 1.1E-31 T 15-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Gene3D G3DSA:3.40.10.10 2 76 1.1E-28 T 15-10-2018 IPR035451 Ada-like domain superfamily VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Pfam PF02805 Metal binding domain of Ada 11 74 2.1E-28 T 15-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Gene3D G3DSA:3.30.310.20 197 310 1.1E-25 T 15-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 SMART SM00478 320 454 0.006 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Gene3D G3DSA:1.10.340.30 312 411 9.2E-18 T 15-10-2018 VIBNI_B0940 3213c9e339b6d201c8fc4184055063c1 454 Pfam PF12833 Helix-turn-helix domain 109 187 7.9E-22 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1765 4ee88731e111d99557749671ff8f7eeb 409 Gene3D G3DSA:3.30.1540.10 236 336 1.5E-104 T 15-10-2018 VIBNI_A1765 4ee88731e111d99557749671ff8f7eeb 409 SUPERFAMILY SSF89796 7 406 1.7E-108 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A1765 4ee88731e111d99557749671ff8f7eeb 409 Gene3D G3DSA:3.40.50.10540 10 399 1.5E-104 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A1765 4ee88731e111d99557749671ff8f7eeb 409 Pfam PF02515 CoA-transferase family III 11 381 2.1E-94 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 VIBNI_B1030 b5ff3d8ee93a7658c2aa5af1ddb4d2a8 207 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VIBNI_B1030 b5ff3d8ee93a7658c2aa5af1ddb4d2a8 207 Gene3D G3DSA:3.40.30.10 25 206 1.4E-40 T 15-10-2018 VIBNI_B1030 b5ff3d8ee93a7658c2aa5af1ddb4d2a8 207 Pfam PF13462 Thioredoxin 48 202 1.8E-9 T 15-10-2018 IPR012336 Thioredoxin-like fold VIBNI_B1030 b5ff3d8ee93a7658c2aa5af1ddb4d2a8 207 SUPERFAMILY SSF52833 47 205 5.7E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 Pfam PF13286 Phosphohydrolase-associated domain 344 435 9.0E-21 T 15-10-2018 IPR026875 Phosphohydrolase-associated domain VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 437 33.838 T 15-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 Pfam PF01966 HD domain 62 145 1.9E-8 T 15-10-2018 IPR006674 HD domain VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 437 8.1E-122 T 15-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 SMART SM00471 58 264 2.9E-11 T 15-10-2018 IPR003607 HD/PDEase domain VIBNI_A2418 a774bea86826ab1ffa4d4369777b6f31 439 SUPERFAMILY SSF109604 21 436 3.45E-78 T 15-10-2018 VIBNI_B1313 116a5e3c88c5a0df20b6888fea345f54 84 Gene3D G3DSA:1.20.1280.290 26 84 1.6E-6 T 15-10-2018 VIBNI_B1313 116a5e3c88c5a0df20b6888fea345f54 84 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 73 3.0E-28 T 15-10-2018 IPR020137 Uncharacterised protein family HI1736 VIBNI_B1313 116a5e3c88c5a0df20b6888fea345f54 84 Pfam PF10688 Bacterial inner membrane protein 5 73 3.2E-6 T 15-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VIBNI_A2195 13ff26c9d4e1c0af082857b0bd060945 334 Gene3D G3DSA:1.10.3470.10 6 333 7.0E-94 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A2195 13ff26c9d4e1c0af082857b0bd060945 334 Pfam PF01032 FecCD transport family 17 330 5.5E-90 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A2195 13ff26c9d4e1c0af082857b0bd060945 334 SUPERFAMILY SSF81345 6 330 3.27E-76 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 Gene3D G3DSA:1.10.1040.10 206 349 1.9E-53 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 73 100 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 215 239 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 23 40 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 255 272 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 190 214 2.3E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 197 335 5.1E-52 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 205 226 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 SUPERFAMILY SSF51735 21 195 4.76E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 Gene3D G3DSA:3.40.50.720 5 204 1.3E-52 T 15-10-2018 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 19 339 37.284 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 PIRSF PIRSF000114 14 349 3.8E-97 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 SUPERFAMILY SSF48179 196 348 3.57E-56 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VIBNI_A3625 016a020b463701a2451dd8b901934a36 349 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 21 175 3.0E-46 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VIBNI_A3394 6e306377bc235614ea1dd62b1daae9bb 259 SUPERFAMILY SSF81301 7 64 1.25E-6 T 15-10-2018 VIBNI_A3394 6e306377bc235614ea1dd62b1daae9bb 259 Pfam PF01909 Nucleotidyltransferase domain 26 67 5.6E-5 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VIBNI_A3394 6e306377bc235614ea1dd62b1daae9bb 259 Gene3D G3DSA:3.30.460.10 4 92 3.3E-6 T 15-10-2018 VIBNI_A1739 c84c08dea5f681bde3f225dfcfa34929 222 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 212 5.9E-56 T 15-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 Gene3D G3DSA:2.60.40.10 1 93 1.9E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 1.3E-11 T 15-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 Pfam PF00759 Glycosyl hydrolase family 9 100 499 8.7E-23 T 15-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 SUPERFAMILY SSF81296 2 90 2.45E-12 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 SUPERFAMILY SSF48208 88 563 6.8E-89 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_A2827 3b5089b8cb98e4d555fcaee1381e274a 578 Gene3D G3DSA:1.50.10.10 94 578 5.3E-224 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_A0538 76eba105255a4b7089da4d234add8bad 218 Pfam PF01323 DSBA-like thioredoxin domain 8 209 1.9E-38 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VIBNI_A0538 76eba105255a4b7089da4d234add8bad 218 Gene3D G3DSA:3.40.30.10 1 213 2.3E-68 T 15-10-2018 VIBNI_A0538 76eba105255a4b7089da4d234add8bad 218 SUPERFAMILY SSF52833 6 213 5.68E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B2169 f66d12cb931f09e60ab3645f1476276e 259 Gene3D G3DSA:3.40.630.30 13 250 8.8E-22 T 15-10-2018 VIBNI_B2169 f66d12cb931f09e60ab3645f1476276e 259 Pfam PF13527 Acetyltransferase (GNAT) domain 126 243 1.3E-5 T 15-10-2018 VIBNI_B2169 f66d12cb931f09e60ab3645f1476276e 259 SUPERFAMILY SSF55729 134 256 2.92E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1058 5aaf24bd07f9e24e611c768f09c6d08f 387 Pfam PF09002 Domain of unknown function (DUF1887) 1 378 1.1E-162 T 15-10-2018 IPR015093 Protein of unknown function DUF1887 VIBNI_A1058 5aaf24bd07f9e24e611c768f09c6d08f 387 Gene3D G3DSA:3.40.1350.10 251 376 2.0E-76 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VIBNI_A1058 5aaf24bd07f9e24e611c768f09c6d08f 387 SUPERFAMILY SSF52980 1 382 4.83E-116 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A1058 5aaf24bd07f9e24e611c768f09c6d08f 387 Gene3D G3DSA:3.40.50.10770 1 140 5.9E-58 T 15-10-2018 VIBNI_A1058 5aaf24bd07f9e24e611c768f09c6d08f 387 Gene3D G3DSA:1.10.10.680 169 250 2.0E-76 T 15-10-2018 VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 PIRSF PIRSF006614 8 151 1.4E-62 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 Pfam PF02142 MGS-like domain 27 118 1.1E-17 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 Gene3D G3DSA:3.40.50.1380 1 151 3.4E-65 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 SUPERFAMILY SSF52335 3 150 3.36E-58 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 15-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.498 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 8.5E-63 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VIBNI_B1246 eb6474ddd83cfda56a192d0bdc381a90 151 SMART SM00851 25 118 3.1E-21 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 249 7.9E-57 T 15-10-2018 VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 SUPERFAMILY SSF51735 3 250 2.36E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 Gene3D G3DSA:3.40.50.720 1 251 2.4E-76 T 15-10-2018 VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 251 8.7E-100 T 15-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 7.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 7.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 7.6E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2189 95d0d62180055a5ab6c5e607e13016ab 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1165 da10448d9cc1a8007e3409dc0c377962 122 Gene3D G3DSA:2.40.50.200 19 122 1.6E-13 T 15-10-2018 IPR036700 Bacterial OB-fold superfamily VIBNI_B1165 da10448d9cc1a8007e3409dc0c377962 122 Pfam PF04076 Bacterial OB fold (BOF) protein 53 119 1.9E-8 T 15-10-2018 IPR005220 Bacterial OB-fold VIBNI_B1165 da10448d9cc1a8007e3409dc0c377962 122 SUPERFAMILY SSF101756 33 122 4.84E-16 T 15-10-2018 IPR036700 Bacterial OB-fold superfamily VIBNI_A2408 0086381ccd22b9980f62c0d0a13eb0cd 198 Pfam PF13305 WHG domain 92 172 5.3E-11 T 15-10-2018 IPR025996 WHG domain VIBNI_A2408 0086381ccd22b9980f62c0d0a13eb0cd 198 SUPERFAMILY SSF46689 16 84 8.74E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2408 0086381ccd22b9980f62c0d0a13eb0cd 198 SUPERFAMILY SSF48498 86 193 2.7E-19 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A2408 0086381ccd22b9980f62c0d0a13eb0cd 198 Gene3D G3DSA:1.10.357.10 1 191 7.6E-40 T 15-10-2018 VIBNI_A2677 a7cbb870b767ef68371504d73454a4b7 269 Gene3D G3DSA:1.25.40.10 173 265 3.8E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2677 a7cbb870b767ef68371504d73454a4b7 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.3E-22 T 15-10-2018 VIBNI_A2677 a7cbb870b767ef68371504d73454a4b7 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 2.1E-42 T 15-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A2677 a7cbb870b767ef68371504d73454a4b7 269 SUPERFAMILY SSF48452 192 258 1.11E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Gene3D G3DSA:2.70.20.10 218 494 2.2E-166 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Gene3D G3DSA:1.10.460.10 163 607 2.2E-166 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 SMART SM00437 284 564 2.9E-93 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Gene3D G3DSA:3.40.50.140 2 157 2.2E-59 T 15-10-2018 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Pfam PF01751 Toprim domain 4 131 2.9E-15 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Pfam PF01131 DNA topoisomerase 159 599 8.9E-116 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 648 2.8E-235 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 1.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 527 541 1.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 1.8E-25 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 648 64.056 T 15-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 Gene3D G3DSA:1.10.290.10 293 422 2.2E-166 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 SMART SM00436 129 224 6.4E-32 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 SMART SM00493 2 125 3.7E-25 T 15-10-2018 IPR006171 TOPRIM domain VIBNI_A0849 1733a35668d548165ddde9b43ed2e0d5 659 SUPERFAMILY SSF56712 3 612 2.09E-185 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VIBNI_A2749 7d9bacc5e8e3603a6a2b962331b25ac5 328 SUPERFAMILY SSF56529 116 315 3.89E-20 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A2749 7d9bacc5e8e3603a6a2b962331b25ac5 328 Gene3D G3DSA:3.90.850.10 110 320 4.5E-15 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_A2749 7d9bacc5e8e3603a6a2b962331b25ac5 328 PIRSF PIRSF033905 1 328 1.3E-148 T 15-10-2018 IPR009645 Uncharacterised conserved protein GguC VIBNI_A3879 63571af211be15a44ffec55f9ac9bfca 247 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 130 246 1.8E-9 T 15-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain VIBNI_A3879 63571af211be15a44ffec55f9ac9bfca 247 SUPERFAMILY SSF56925 99 246 1.65E-21 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A3879 63571af211be15a44ffec55f9ac9bfca 247 Gene3D G3DSA:2.40.160.90 117 247 2.4E-18 T 15-10-2018 VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 Pfam PF13609 Gram-negative porin 7 297 3.3E-33 T 15-10-2018 VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 PRINTS PR00183 E.coli/Salmonella-type porin signature 91 113 2.6E-6 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 PRINTS PR00183 E.coli/Salmonella-type porin signature 20 36 2.6E-6 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 PRINTS PR00183 E.coli/Salmonella-type porin signature 245 262 2.6E-6 T 15-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 Gene3D G3DSA:2.40.160.10 20 314 6.5E-42 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_B1007 caa57b4f1ec7c8e598c2035df8ce6a2a 314 SUPERFAMILY SSF56935 20 314 7.02E-38 T 15-10-2018 VIBNI_A0894 c75202b4c8579ec056182344052aba12 440 Pfam PF13726 Na+-H+ antiporter family 2 88 5.4E-35 T 15-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VIBNI_A0894 c75202b4c8579ec056182344052aba12 440 Pfam PF03553 Na+/H+ antiporter family 150 434 2.9E-73 T 15-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VIBNI_A0894 c75202b4c8579ec056182344052aba12 440 PRINTS PR00173 Glutamate-aspartate symporter signature 373 392 2.8E-6 T 15-10-2018 VIBNI_A0894 c75202b4c8579ec056182344052aba12 440 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.8E-6 T 15-10-2018 VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 248 2.4E-84 T 15-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 SMART SM00079 26 250 2.0E-4 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 Gene3D G3DSA:3.40.190.10 30 248 1.5E-72 T 15-10-2018 VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 SMART SM00062 26 251 4.5E-70 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 SUPERFAMILY SSF53850 1 252 3.64E-71 T 15-10-2018 VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 249 1.4E-61 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A1100 6a7a6ba6f0d185e8ccbd4af4d9096f53 255 Gene3D G3DSA:3.40.190.10 112 207 1.5E-72 T 15-10-2018 VIBNI_A2216 e8b0f433bb30040dbf3c14ffdda30c19 132 Pfam PF03413 Peptidase propeptide and YPEB domain 69 115 1.6E-4 T 15-10-2018 IPR025711 PepSY domain VIBNI_A2216 e8b0f433bb30040dbf3c14ffdda30c19 132 Gene3D G3DSA:3.10.450.40 57 120 6.0E-8 T 15-10-2018 VIBNI_B0774 6d109e1a9236a4ab74fe4d8b71f00e3e 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.1E-14 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VIBNI_B0774 6d109e1a9236a4ab74fe4d8b71f00e3e 95 SUPERFAMILY SSF54909 1 94 6.44E-28 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0774 6d109e1a9236a4ab74fe4d8b71f00e3e 95 Gene3D G3DSA:3.30.70.100 1 95 2.3E-29 T 15-10-2018 VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 Pfam PF00106 short chain dehydrogenase 14 208 8.5E-51 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 Gene3D G3DSA:3.40.50.720 1 246 3.0E-69 T 15-10-2018 VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.2E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 5.2E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.2E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.2E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.2E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A2337 5d1ce788638aa724a4ac8f3f348e292b 247 SUPERFAMILY SSF51735 8 241 1.19E-60 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0913 8c9aaecbed81d731676610f04b303647 334 PIRSF PIRSF017617 1 334 8.8E-133 T 15-10-2018 IPR023603 Threonine aldolase VIBNI_B0913 8c9aaecbed81d731676610f04b303647 334 Gene3D G3DSA:3.90.1150.10 244 334 5.9E-25 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_B0913 8c9aaecbed81d731676610f04b303647 334 Pfam PF01212 Beta-eliminating lyase 2 283 2.4E-95 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VIBNI_B0913 8c9aaecbed81d731676610f04b303647 334 SUPERFAMILY SSF53383 1 333 2.79E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0913 8c9aaecbed81d731676610f04b303647 334 Gene3D G3DSA:3.40.640.10 1 243 3.7E-95 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 PIRSF PIRSF000545 1 313 2.5E-146 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 88 245 3.1E-12 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 Hamap MF_00215 Pantothenate kinase [coaA]. 1 313 176.429 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 Gene3D G3DSA:3.40.50.300 2 313 2.4E-93 T 15-10-2018 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 9 313 1.6E-147 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VIBNI_A3335 19cbce2a27845daff11cf36f75a83ea5 313 SUPERFAMILY SSF52540 8 313 3.17E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0026 54168a6a8409431429fa2b67e36d2de7 226 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 3.0E-14 T 15-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VIBNI_B0026 54168a6a8409431429fa2b67e36d2de7 226 Gene3D G3DSA:3.10.620.30 23 213 6.9E-75 T 15-10-2018 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.4E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.4E-7 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 SUPERFAMILY SSF46689 14 95 1.13E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 Gene3D G3DSA:1.10.357.10 8 210 2.0E-42 T 15-10-2018 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 67 1.5E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1215 813911deef22f32aac0a7b31c872475b 214 SUPERFAMILY SSF48498 91 202 2.22E-14 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_A2608 a62c42ed2643058f0ed1977ac1dfc7b5 116 SMART SM00938 6 104 8.4E-6 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2608 a62c42ed2643058f0ed1977ac1dfc7b5 116 Gene3D G3DSA:3.30.70.120 1 104 1.2E-12 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_A2608 a62c42ed2643058f0ed1977ac1dfc7b5 116 SUPERFAMILY SSF54913 1 102 3.06E-20 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VIBNI_A0664 692fe9cca95e8cf9f86a35500911cca0 294 SUPERFAMILY SSF48576 6 284 6.48E-84 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily VIBNI_A0664 692fe9cca95e8cf9f86a35500911cca0 294 Pfam PF00348 Polyprenyl synthetase 31 270 2.9E-57 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VIBNI_A0664 692fe9cca95e8cf9f86a35500911cca0 294 Gene3D G3DSA:1.10.600.10 1 294 8.8E-109 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily VIBNI_A0664 692fe9cca95e8cf9f86a35500911cca0 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site VIBNI_A0664 692fe9cca95e8cf9f86a35500911cca0 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 Pfam PF00258 Flavodoxin 5 160 1.2E-25 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 PIRSF PIRSF038996 1 171 3.5E-58 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 2.2E-68 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 Gene3D G3DSA:3.40.50.360 1 171 2.7E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0316 7ef34ea1457ceb926e24b154676ec4f6 172 SUPERFAMILY SSF52218 1 165 2.0E-48 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3731 1f23eb804b089c13e26bf5e404f2e1c7 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.482 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VIBNI_A3731 1f23eb804b089c13e26bf5e404f2e1c7 179 Pfam PF04345 Chorismate lyase 12 179 3.8E-52 T 15-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VIBNI_A3731 1f23eb804b089c13e26bf5e404f2e1c7 179 SUPERFAMILY SSF64288 9 174 7.85E-42 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A3731 1f23eb804b089c13e26bf5e404f2e1c7 179 Gene3D G3DSA:3.40.1410.10 8 174 8.5E-40 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0608 0ba3d4de1dbe2d7b9fc1d793ad3ce9d2 457 PIRSF PIRSF006603 9 456 3.6E-60 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0608 0ba3d4de1dbe2d7b9fc1d793ad3ce9d2 457 Pfam PF01554 MatE 25 185 8.8E-26 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0608 0ba3d4de1dbe2d7b9fc1d793ad3ce9d2 457 Pfam PF01554 MatE 249 410 2.4E-18 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0608 0ba3d4de1dbe2d7b9fc1d793ad3ce9d2 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 415 3.0E-49 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Gene3D G3DSA:2.40.10.170 2 75 2.3E-28 T 15-10-2018 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 8.5E-61 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 SUPERFAMILY SSF50615 1 75 2.88E-24 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Gene3D G3DSA:1.10.1140.10 352 467 1.8E-53 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 SUPERFAMILY SSF47917 352 466 2.35E-51 T 15-10-2018 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.924 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 SUPERFAMILY SSF52540 77 355 2.74E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.7E-19 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 Gene3D G3DSA:3.40.50.300 76 351 1.0E-111 T 15-10-2018 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 3.3E-248 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VIBNI_A3861 473c980cd93d3b9230da4c2b00af6a56 467 SMART SM00382 142 334 5.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0099 f68f587608055813a6266b4625b5f58d 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 2.1E-29 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 VIBNI_A0099 f68f587608055813a6266b4625b5f58d 68 Gene3D G3DSA:3.30.1910.10 1 63 1.3E-29 T 15-10-2018 VIBNI_A0099 f68f587608055813a6266b4625b5f58d 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 8.0E-29 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 SUPERFAMILY SSF82808 63 177 4.71E-48 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 Pfam PF17206 SeqA protein N-terminal domain 1 33 2.5E-23 T 15-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 PIRSF PIRSF019401 53 177 1.2E-37 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 PIRSF PIRSF019401 1 69 1.9E-18 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.207 T 15-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 Pfam PF03925 SeqA protein C-terminal domain 69 175 4.9E-46 T 15-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 SUPERFAMILY SSF47598 1 33 2.16E-13 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 Gene3D G3DSA:1.20.1380.10 62 177 1.8E-47 T 15-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VIBNI_A2573 aab50b6ba51184c30be037eb20b7a7be 177 Gene3D G3DSA:1.10.1220.10 1 39 8.1E-24 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VIBNI_B1346 9472ddd0dca7a3e95b0d2aeec5f30a53 158 Pfam PF05360 yiaA/B two helix domain 75 127 1.6E-21 T 15-10-2018 IPR008024 YiaAB two helix VIBNI_B1346 9472ddd0dca7a3e95b0d2aeec5f30a53 158 Pfam PF05360 yiaA/B two helix domain 12 64 1.3E-19 T 15-10-2018 IPR008024 YiaAB two helix VIBNI_B0152 88774ed5e3f65b8122c8a052bb8de074 227 SUPERFAMILY SSF46785 1 61 1.5E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0152 88774ed5e3f65b8122c8a052bb8de074 227 Pfam PF08279 HTH domain 6 60 1.6E-14 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 VIBNI_B0152 88774ed5e3f65b8122c8a052bb8de074 227 Gene3D G3DSA:1.10.10.10 1 63 3.6E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0152 88774ed5e3f65b8122c8a052bb8de074 227 Pfam PF13280 WYL domain 139 224 2.9E-18 T 15-10-2018 IPR026881 WYL domain VIBNI_B0259 2b06892e67a0152b0e6d420c7cf63acc 165 SUPERFAMILY SSF143744 28 164 1.44E-32 T 15-10-2018 IPR038084 GlcG-like domain superfamily VIBNI_B0259 2b06892e67a0152b0e6d420c7cf63acc 165 Pfam PF03928 Haem-degrading 37 161 9.3E-26 T 15-10-2018 IPR005624 Haem-degrading VIBNI_B0259 2b06892e67a0152b0e6d420c7cf63acc 165 Gene3D G3DSA:3.30.450.150 19 164 2.1E-39 T 15-10-2018 IPR038084 GlcG-like domain superfamily VIBNI_A0305 bbb120751f5eec9b36a26875d5a9d4c7 280 Gene3D G3DSA:1.10.3720.10 6 271 2.5E-62 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0305 bbb120751f5eec9b36a26875d5a9d4c7 280 SUPERFAMILY SSF161098 13 279 1.5E-69 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0305 bbb120751f5eec9b36a26875d5a9d4c7 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 5.2E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2850 8704c4ffa813d82b109226ba8cf976fd 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 9.3E-46 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2850 8704c4ffa813d82b109226ba8cf976fd 161 SUPERFAMILY SSF55083 1 158 2.35E-53 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2850 8704c4ffa813d82b109226ba8cf976fd 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.4E-36 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2850 8704c4ffa813d82b109226ba8cf976fd 161 Gene3D G3DSA:3.30.70.560 1 159 7.2E-58 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_A2850 8704c4ffa813d82b109226ba8cf976fd 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VIBNI_B1201 8b1e0a715df1f75738c1d16c735a8033 330 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 169 6.6E-43 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B1201 8b1e0a715df1f75738c1d16c735a8033 330 Gene3D G3DSA:3.40.50.300 1 195 7.1E-49 T 15-10-2018 VIBNI_B1201 8b1e0a715df1f75738c1d16c735a8033 330 SMART SM00833 241 324 0.0059 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VIBNI_B1201 8b1e0a715df1f75738c1d16c735a8033 330 SUPERFAMILY SSF52540 5 178 9.59E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0769 fb1a2aea43d383780de82af4cf95599e 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.8E-7 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_A0769 fb1a2aea43d383780de82af4cf95599e 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 5.4E-37 T 15-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VIBNI_A0769 fb1a2aea43d383780de82af4cf95599e 154 SMART SM00855 2 116 1.1E-4 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VIBNI_A0769 fb1a2aea43d383780de82af4cf95599e 154 SUPERFAMILY SSF53254 1 143 3.53E-19 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_A0769 fb1a2aea43d383780de82af4cf95599e 154 Gene3D G3DSA:3.40.50.1240 1 154 4.9E-33 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 Gene3D G3DSA:3.40.50.720 1 245 1.5E-64 T 15-10-2018 VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.5E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 SUPERFAMILY SSF51735 2 244 1.44E-68 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 1.3E-53 T 15-10-2018 VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1261 8ddf8ac8d6a048ce8242d3087164a6fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 SMART SM00382 400 593 1.2E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 Gene3D G3DSA:3.40.50.300 366 613 2.0E-94 T 15-10-2018 VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 Gene3D G3DSA:1.20.1560.10 38 365 5.1E-113 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 Pfam PF00005 ABC transporter 391 540 3.0E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 Pfam PF00664 ABC transporter transmembrane region 52 329 7.9E-34 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 SUPERFAMILY SSF52540 364 611 1.93E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0761 be8aa1d7e2f15396742f850bc6a5e70f 613 SUPERFAMILY SSF90123 34 358 2.35E-57 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 44.795 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Gene3D G3DSA:1.20.1180.10 197 262 1.2E-25 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 SUPERFAMILY SSF51161 1 262 1.92E-78 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Gene3D G3DSA:2.160.10.10 1 196 2.0E-50 T 15-10-2018 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 4.7E-31 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 34 4.3E-7 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 68 0.0013 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.1E-7 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.5E-100 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VIBNI_A2492 e2edf0d5abf6debb1ce10fd49650dc95 262 PIRSF PIRSF000456 4 262 2.2E-99 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 Gene3D G3DSA:3.20.20.120 113 365 1.2E-107 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 25 120 1.3E-19 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 Pfam PF13378 Enolase C-terminal domain-like 148 365 2.4E-44 T 15-10-2018 IPR029065 Enolase C-terminal domain-like VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 SMART SM00922 140 248 2.5E-8 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 SUPERFAMILY SSF51604 108 376 2.23E-53 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 Gene3D G3DSA:3.30.390.10 3 372 1.2E-107 T 15-10-2018 IPR029017 Enolase-like, N-terminal VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 95 120 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VIBNI_A1553 8b181e7e8030cf19078a19c0d78b8aae 381 SUPERFAMILY SSF54826 1 123 1.56E-31 T 15-10-2018 VIBNI_B1534 ab097a3910213c755f4d83d09eb00cfc 278 SUPERFAMILY SSF161098 8 278 2.8E-65 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1534 ab097a3910213c755f4d83d09eb00cfc 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 272 2.5E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1534 ab097a3910213c755f4d83d09eb00cfc 278 Gene3D G3DSA:1.10.3720.10 2 269 9.2E-57 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 Gene3D G3DSA:3.40.50.620 6 167 2.3E-54 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 Pfam PF01467 Cytidylyltransferase-like 10 138 6.5E-20 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 6.4E-59 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.315 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 1.5E-48 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 1.5E-48 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 1.5E-48 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.5E-48 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.5E-48 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 1.8E-19 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VIBNI_A3694 ed61b28d148da71f35648b53dffabe4d 168 SUPERFAMILY SSF52374 8 161 2.95E-43 T 15-10-2018 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 SUPERFAMILY SSF55252 82 151 2.22E-19 T 15-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.9E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.9E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.9E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.9E-23 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 Gene3D G3DSA:1.10.10.10 1 74 7.7E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 Gene3D G3DSA:3.30.1360.40 75 156 4.4E-34 T 15-10-2018 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 Pfam PF01316 Arginine repressor, DNA binding domain 7 74 8.1E-23 T 15-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.3E-42 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.317 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 2.3E-21 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 SUPERFAMILY SSF46785 4 77 1.81E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2931 1c09d46605651f572377443ad41e739c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 3.0E-21 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VIBNI_B0501 6ff39d12ffe09836ef9996ca146b25f1 219 Gene3D G3DSA:1.10.150.240 17 84 2.6E-49 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B0501 6ff39d12ffe09836ef9996ca146b25f1 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 8.7E-31 T 15-10-2018 VIBNI_B0501 6ff39d12ffe09836ef9996ca146b25f1 219 Gene3D G3DSA:3.40.50.1000 6 200 2.6E-49 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0501 6ff39d12ffe09836ef9996ca146b25f1 219 SUPERFAMILY SSF56784 3 212 1.1E-43 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1344 a1084d039784c1df02bf7b532e1e5a97 325 Gene3D G3DSA:3.40.50.720 1 134 7.2E-36 T 15-10-2018 VIBNI_B1344 a1084d039784c1df02bf7b532e1e5a97 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.6E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_B1344 a1084d039784c1df02bf7b532e1e5a97 325 SUPERFAMILY SSF51735 2 134 8.23E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1344 a1084d039784c1df02bf7b532e1e5a97 325 SUPERFAMILY SSF55347 127 292 2.45E-21 T 15-10-2018 VIBNI_B1344 a1084d039784c1df02bf7b532e1e5a97 325 Gene3D G3DSA:3.30.360.10 135 325 1.3E-52 T 15-10-2018 VIBNI_A0012 41c5c604b685fb1b5916f7a49805866e 204 Pfam PF01169 Uncharacterized protein family UPF0016 24 97 1.3E-20 T 15-10-2018 IPR001727 Gdt1 family VIBNI_A0012 41c5c604b685fb1b5916f7a49805866e 204 Pfam PF01169 Uncharacterized protein family UPF0016 120 195 2.0E-18 T 15-10-2018 IPR001727 Gdt1 family VIBNI_A3708 fc231009059f5efe612f919b186f5400 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 3.2E-42 T 15-10-2018 IPR013527 YicC-like, N-terminal VIBNI_A3708 fc231009059f5efe612f919b186f5400 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.2E-34 T 15-10-2018 IPR013551 Domain of unknown function DUF1732 VIBNI_A3708 fc231009059f5efe612f919b186f5400 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.8E-118 T 15-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VIBNI_A1665 89929c678effdd75c5e8b0d8c27ce354 677 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 641 1.3E-36 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1665 89929c678effdd75c5e8b0d8c27ce354 677 Gene3D G3DSA:1.10.287.950 347 677 3.1E-58 T 15-10-2018 VIBNI_A1665 89929c678effdd75c5e8b0d8c27ce354 677 SMART SM00283 413 675 3.0E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1665 89929c678effdd75c5e8b0d8c27ce354 677 SUPERFAMILY SSF58104 372 675 1.92E-58 T 15-10-2018 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 Gene3D G3DSA:2.60.300.12 2 107 2.3E-37 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.8E-58 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.4E-25 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 SUPERFAMILY SSF89360 1 96 1.44E-33 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VIBNI_A2785 085667650dad59362bda02160f2529d7 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 3.2E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VIBNI_A1900 71cfab8f64eea5d8e3efe10608f66859 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 4.4E-46 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_A1900 71cfab8f64eea5d8e3efe10608f66859 231 Gene3D G3DSA:3.40.225.10 1 231 9.9E-62 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_A1900 71cfab8f64eea5d8e3efe10608f66859 231 SMART SM01007 7 198 6.5E-68 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_A1900 71cfab8f64eea5d8e3efe10608f66859 231 SUPERFAMILY SSF53639 2 223 8.04E-69 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_A1900 71cfab8f64eea5d8e3efe10608f66859 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.4E-125 T 15-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 VIBNI_B1873 75faa7aea72298da788dd80f570abed6 150 Gene3D G3DSA:3.40.630.30 1 145 1.4E-21 T 15-10-2018 VIBNI_B1873 75faa7aea72298da788dd80f570abed6 150 Pfam PF00583 Acetyltransferase (GNAT) family 47 133 1.2E-13 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1873 75faa7aea72298da788dd80f570abed6 150 SUPERFAMILY SSF55729 3 139 5.06E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0822 9c82c2f4ba740961787d382fc3cb8f7f 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 143 40.341 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VIBNI_A0822 9c82c2f4ba740961787d382fc3cb8f7f 145 Pfam PF03692 Putative zinc- or iron-chelating domain 22 90 1.8E-8 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VIBNI_A0822 9c82c2f4ba740961787d382fc3cb8f7f 145 PIRSF PIRSF006173 1 143 2.4E-64 T 15-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VIBNI_B1423 793426cc2d238ee735ed716a58770834 104 Pfam PF06945 Protein of unknown function (DUF1289) 5 48 4.2E-16 T 15-10-2018 IPR010710 Protein of unknown function DUF1289 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 ProDom PD128112 MEMBRANE OUTER PILUS LIPOPROTEIN BIOSYNTHESIS C TOXIN-COREGULATED TOXIN COFD TCPC 207 429 6.0E-4 T 15-10-2018 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 Pfam PF07655 Secretin N-terminal domain 145 242 8.1E-27 T 15-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 Gene3D G3DSA:3.55.50.30 54 148 2.8E-9 T 15-10-2018 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 PRINTS PR00811 Bacterial general secretion pathway protein D signature 349 373 2.6E-16 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 PRINTS PR00811 Bacterial general secretion pathway protein D signature 271 281 2.6E-16 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 PRINTS PR00811 Bacterial general secretion pathway protein D signature 494 512 2.6E-16 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 PRINTS PR00811 Bacterial general secretion pathway protein D signature 517 531 2.6E-16 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 Pfam PF00263 Bacterial type II and III secretion system protein 354 529 1.7E-41 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 SMART SM00965 93 141 1.3E-6 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VIBNI_A3001 1768ad6feeba0c1dc28b7596417979cc 552 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 237 529 9.4E-93 T 15-10-2018 IPR013358 Pilus biogenesis, MshL VIBNI_B1609 255c56999fb19be5e989f535916381bc 240 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 222 1.4E-43 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VIBNI_B1609 255c56999fb19be5e989f535916381bc 240 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 58 225 2.2E-29 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VIBNI_A2880 6a58d89f9e58c3b65fb96be5c3025794 322 SUPERFAMILY SSF51679 25 321 2.49E-59 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VIBNI_A2880 6a58d89f9e58c3b65fb96be5c3025794 322 Gene3D G3DSA:3.20.20.30 4 322 4.9E-94 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VIBNI_A2880 6a58d89f9e58c3b65fb96be5c3025794 322 Pfam PF00296 Luciferase-like monooxygenase 29 239 4.2E-39 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VIBNI_A2880 6a58d89f9e58c3b65fb96be5c3025794 322 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 16 320 2.8E-121 T 15-10-2018 IPR020020 Luciferase-type oxidoreductase VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 Pfam PF02779 Transketolase, pyrimidine binding domain 13 173 5.8E-35 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 SUPERFAMILY SSF52518 6 178 2.57E-53 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 SMART SM00861 13 178 3.4E-46 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 Gene3D G3DSA:3.40.50.970 2 186 1.5E-58 T 15-10-2018 VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 ProSitePatterns PS00802 Transketolase signature 2. 121 137 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 Pfam PF02780 Transketolase, C-terminal domain 194 307 1.2E-17 T 15-10-2018 IPR033248 Transketolase, C-terminal domain VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 Gene3D G3DSA:3.40.50.920 193 321 2.5E-23 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_B1537 89b3fd519a99d45ac783d4e18f7fcf92 321 SUPERFAMILY SSF52922 192 316 1.13E-17 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 4.0E-180 T 15-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 4.4E-111 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.0E-90 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 Gene3D G3DSA:3.20.20.70 2 358 2.6E-146 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 PIRSF PIRSF001359 13 358 3.2E-94 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VIBNI_A0086 4f29900412df237d01bb1cf11887931c 358 SUPERFAMILY SSF51569 4 356 1.39E-130 T 15-10-2018 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 Gene3D G3DSA:1.10.10.10 122 220 7.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 Pfam PF00072 Response regulator receiver domain 4 113 4.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 SMART SM00862 145 216 2.2E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 SMART SM00448 1 112 1.7E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 SUPERFAMILY SSF46894 118 217 8.5E-25 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 Gene3D G3DSA:3.40.50.2300 1 121 7.3E-40 T 15-10-2018 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.5E-19 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A2900 ec7f4f6d25b90b31feb854a0b8efd13a 220 SUPERFAMILY SSF52172 1 118 1.11E-36 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 SMART SM00283 272 533 4.7E-71 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 500 1.5E-44 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 1.2E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.2E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 1.2E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 Gene3D G3DSA:1.10.287.950 206 534 7.6E-70 T 15-10-2018 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 SUPERFAMILY SSF58104 225 534 2.75E-77 T 15-10-2018 VIBNI_A0193 497124e97404691251e2ca83b6c1f3bd 534 SMART SM00304 205 257 1.2E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A0786 1140ca2395ea01d9c692742d1486409e 573 SUPERFAMILY SSF48452 460 556 9.96E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0786 1140ca2395ea01d9c692742d1486409e 573 Pfam PF04932 O-Antigen ligase 200 358 2.3E-13 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_A0786 1140ca2395ea01d9c692742d1486409e 573 Gene3D G3DSA:1.25.40.10 445 569 4.9E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 SUPERFAMILY SSF52540 1 221 8.77E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 Pfam PF00005 ABC transporter 25 178 9.7E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 Gene3D G3DSA:3.40.50.300 1 228 3.7E-50 T 15-10-2018 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 223 1.0E-104 T 15-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 37 50 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VIBNI_A0020 3c02aa5c7f8e83a1f9416d1882b594e1 238 SMART SM00382 33 226 2.1E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A3401 5079bee39536c7d6228c0326dad43126 219 Pfam PF13489 Methyltransferase domain 65 197 6.4E-17 T 15-10-2018 VIBNI_A3401 5079bee39536c7d6228c0326dad43126 219 Gene3D G3DSA:3.40.50.150 111 205 1.8E-11 T 15-10-2018 VIBNI_A3401 5079bee39536c7d6228c0326dad43126 219 SUPERFAMILY SSF53335 48 200 4.56E-23 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3401 5079bee39536c7d6228c0326dad43126 219 Gene3D G3DSA:3.40.50.150 2 110 3.3E-5 T 15-10-2018 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 Gene3D G3DSA:1.10.10.60 241 296 5.6E-16 T 15-10-2018 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 SMART SM00342 208 291 3.4E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 SUPERFAMILY SSF46689 191 242 7.17E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 Pfam PF12833 Helix-turn-helix domain 215 292 3.7E-20 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 SUPERFAMILY SSF46689 245 294 5.38E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1940 760cb0dae23dceeb8090f81588e62518 297 Gene3D G3DSA:1.10.10.60 192 240 3.8E-10 T 15-10-2018 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 Gene3D G3DSA:3.20.20.150 175 393 2.9E-77 T 15-10-2018 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 Gene3D G3DSA:3.20.20.150 1 174 2.7E-67 T 15-10-2018 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 214.16 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 SUPERFAMILY SSF51658 1 384 7.31E-78 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 2.5E-152 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 393 1.7E-204 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_B2068 d15e9048025fc0a7c26c8241f6309ccf 394 PIRSF PIRSF016049 1 393 7.7E-173 T 15-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VIBNI_B0194 e5c09341e4012e0c16f4d9920b1fc3c6 435 TIGRFAM TIGR00797 matE: MATE efflux family protein 5 397 1.6E-50 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0194 e5c09341e4012e0c16f4d9920b1fc3c6 435 Pfam PF01554 MatE 231 392 1.1E-12 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0194 e5c09341e4012e0c16f4d9920b1fc3c6 435 Pfam PF01554 MatE 5 164 1.8E-20 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 SMART SM00382 56 249 0.0074 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 250 271 9.7E-6 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 Gene3D G3DSA:3.40.50.300 27 272 1.4E-51 T 15-10-2018 VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 Pfam PF00005 ABC transporter 48 202 6.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 31 272 1.2E-113 T 15-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD VIBNI_B0602 a7da6b22217b2fe539b652d53f3ed724 273 SUPERFAMILY SSF52540 31 270 2.5E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0740 67ec5876346a8963de75f4f1f64d778e 295 Gene3D G3DSA:3.40.50.300 22 263 1.1E-58 T 15-10-2018 VIBNI_A0740 67ec5876346a8963de75f4f1f64d778e 295 PIRSF PIRSF003092 6 288 1.5E-86 T 15-10-2018 IPR025501 ATP binding protein MinD VIBNI_A0740 67ec5876346a8963de75f4f1f64d778e 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.3E-21 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VIBNI_A0740 67ec5876346a8963de75f4f1f64d778e 295 SUPERFAMILY SSF52540 22 284 1.66E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 Pfam PF00571 CBS domain 6 61 3.8E-7 T 15-10-2018 IPR000644 CBS domain VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 Pfam PF00571 CBS domain 73 127 4.9E-13 T 15-10-2018 IPR000644 CBS domain VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 SMART SM00116 13 61 2.2 T 15-10-2018 IPR000644 CBS domain VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 SMART SM00116 80 128 6.5E-7 T 15-10-2018 IPR000644 CBS domain VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 Gene3D G3DSA:3.10.580.10 1 128 1.2E-28 T 15-10-2018 VIBNI_A1051 7640ecbf3b90c9f18f4c385f48e4f262 139 SUPERFAMILY SSF54631 1 127 2.15E-31 T 15-10-2018 VIBNI_A0605 1b9bdd799f20fa38ee0e73b5e52fb797 529 Pfam PF03806 AbgT putative transporter family 19 527 7.7E-230 T 15-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 54 70 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 142 166 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 35 54 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 268 294 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 166 187 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 418 435 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PRINTS PR01806 Virulence factor MviN signature 366 385 5.3E-76 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 510 8.8E-139 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 PIRSF PIRSF002869 1 518 2.8E-155 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.818 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_A0357 c5b7725bda52eb03335e4262e968d104 519 Pfam PF03023 MviN-like protein 30 483 4.1E-149 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VIBNI_B1616 d80275d3e361dc283159a84394f59ab4 470 Pfam PF13440 Polysaccharide biosynthesis protein 29 316 1.9E-45 T 15-10-2018 VIBNI_B0896 a2841c6b70fd94546ab319acf390c4c0 419 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 94 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VIBNI_B0896 a2841c6b70fd94546ab319acf390c4c0 419 Gene3D G3DSA:1.20.1250.20 17 402 2.0E-47 T 15-10-2018 VIBNI_B0896 a2841c6b70fd94546ab319acf390c4c0 419 SUPERFAMILY SSF103473 18 409 1.7E-57 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0896 a2841c6b70fd94546ab319acf390c4c0 419 Pfam PF07690 Major Facilitator Superfamily 28 359 1.9E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 SUPERFAMILY SSF53850 106 315 4.34E-28 T 15-10-2018 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 9.6E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 15 314 9.1E-136 T 15-10-2018 IPR011781 D-serine deaminase transcriptional activator VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 Gene3D G3DSA:3.40.190.10 118 311 5.2E-48 T 15-10-2018 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 Gene3D G3DSA:1.10.10.10 21 106 7.2E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 SUPERFAMILY SSF46785 21 97 4.22E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 1.1E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 Pfam PF03466 LysR substrate binding domain 107 315 7.0E-28 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0507 2e789f6a4e2e8e2a1a5f38874349846d 318 Gene3D G3DSA:3.40.190.10 178 285 5.2E-48 T 15-10-2018 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 PIRSF PIRSF000370 4 226 1.4E-68 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 226 35.0 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 Gene3D G3DSA:3.20.20.70 5 226 1.7E-52 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 Pfam PF13394 4Fe-4S single cluster domain 27 139 4.0E-10 T 15-10-2018 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 12 225 1.6E-110 T 15-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VIBNI_A1826 8aa5b48593a835784034a2463154b002 226 Pfam PF04055 Radical SAM superfamily 30 127 4.8E-7 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 SUPERFAMILY SSF53850 90 293 8.32E-34 T 15-10-2018 VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 Gene3D G3DSA:1.10.10.10 2 87 1.9E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 SUPERFAMILY SSF46785 1 111 6.82E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 Gene3D G3DSA:3.40.190.290 92 291 6.7E-47 T 15-10-2018 VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.8E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0705 6df12bb480e0f32c08db5cdb3dc0d28a 294 Pfam PF03466 LysR substrate binding domain 89 291 2.9E-29 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 SUPERFAMILY SSF55874 336 480 1.96E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 SUPERFAMILY SSF47384 239 307 8.24E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 Gene3D G3DSA:3.30.565.10 331 481 2.9E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 1.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 1.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 479 6.8E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 Gene3D G3DSA:1.10.287.130 225 322 2.2E-17 T 15-10-2018 VIBNI_B0968 0cee5cdaa7e629d86b03a5980a23c314 483 SMART SM00387 369 481 7.8E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 Gene3D G3DSA:3.30.70.270 519 699 7.9E-46 T 15-10-2018 VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 Gene3D G3DSA:3.30.450.40 182 335 2.5E-8 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 SMART SM00267 523 700 1.1E-48 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 Gene3D G3DSA:3.30.450.40 336 510 1.6E-6 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 SUPERFAMILY SSF55073 539 699 6.51E-39 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 SUPERFAMILY SSF55781 343 513 9.6E-9 T 15-10-2018 VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 698 1.4E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 SUPERFAMILY SSF55781 178 332 1.13E-7 T 15-10-2018 VIBNI_B2024 9ca52a7c808e5c95ae096b51e0fb34ed 707 Pfam PF00990 Diguanylate cyclase, GGDEF domain 535 696 1.3E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 116 124 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 66 76 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 50 65 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 80 96 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 1.2E-14 T 15-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 Gene3D G3DSA:1.10.760.10 11 124 2.6E-27 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1018 8a8aac6233e4ba43a49c0be30d7ebcf5 139 SUPERFAMILY SSF46626 32 127 1.0E-22 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3598 54321a75c5b4caad9ba282e498f6549b 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.5E-102 T 15-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VIBNI_A3598 54321a75c5b4caad9ba282e498f6549b 296 SUPERFAMILY SSF51730 22 294 2.94E-95 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like VIBNI_A3598 54321a75c5b4caad9ba282e498f6549b 296 Gene3D G3DSA:3.20.20.220 1 296 3.8E-112 T 15-10-2018 VIBNI_A3598 54321a75c5b4caad9ba282e498f6549b 296 Pfam PF02219 Methylenetetrahydrofolate reductase 20 291 2.3E-101 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 Gene3D G3DSA:3.40.50.10800 200 295 9.9E-94 T 15-10-2018 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 Gene3D G3DSA:3.40.50.10800 31 322 9.9E-94 T 15-10-2018 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 SUPERFAMILY SSF142754 28 341 4.84E-106 T 15-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 341 1.4E-114 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 Gene3D G3DSA:3.40.50.10800 115 340 9.9E-94 T 15-10-2018 VIBNI_A2253 ff9bf381b825d829fca2edf7bfd0db93 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 6.0E-102 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VIBNI_B0627 909fe2d8627d8d89f758a262c5712deb 346 SUPERFAMILY SSF81345 16 340 6.15E-77 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0627 909fe2d8627d8d89f758a262c5712deb 346 Gene3D G3DSA:1.10.3470.10 17 344 8.8E-89 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0627 909fe2d8627d8d89f758a262c5712deb 346 Pfam PF01032 FecCD transport family 30 340 3.5E-87 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Gene3D G3DSA:3.30.420.10 1 193 6.6E-66 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Gene3D G3DSA:1.10.150.80 294 371 7.7E-28 T 15-10-2018 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 SUPERFAMILY SSF47819 192 300 9.59E-25 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 SUPERFAMILY SSF53098 2 210 5.59E-68 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 42.952 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Gene3D G3DSA:1.10.150.80 195 292 1.6E-19 T 15-10-2018 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 SUPERFAMILY SSF47819 296 370 1.13E-21 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 SMART SM00474 3 171 1.6E-43 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 TIGRFAM TIGR01388 rnd: ribonuclease D 6 370 3.6E-145 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Pfam PF01612 3'-5' exonuclease 3 170 2.9E-38 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VIBNI_A2525 8551961aa847ebbb04ea6024a876466f 371 Pfam PF00570 HRDC domain 213 278 9.8E-10 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VIBNI_B2105 1b6fd78eaf463edfd5eac9e15d8db02d 327 SUPERFAMILY SSF100950 72 324 1.0E-60 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B2105 1b6fd78eaf463edfd5eac9e15d8db02d 327 Gene3D G3DSA:1.10.10.10 4 62 7.2E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B2105 1b6fd78eaf463edfd5eac9e15d8db02d 327 Pfam PF04198 Putative sugar-binding domain 71 324 1.5E-58 T 15-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VIBNI_B2105 1b6fd78eaf463edfd5eac9e15d8db02d 327 Gene3D G3DSA:3.40.50.1360 63 324 6.4E-69 T 15-10-2018 VIBNI_B0286 37289b0fa9ac3b0758533e26ec870fa2 295 Gene3D G3DSA:1.10.10.10 1 83 1.2E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0286 37289b0fa9ac3b0758533e26ec870fa2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.2E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0286 37289b0fa9ac3b0758533e26ec870fa2 295 SUPERFAMILY SSF53850 100 211 1.45E-6 T 15-10-2018 VIBNI_B0286 37289b0fa9ac3b0758533e26ec870fa2 295 SUPERFAMILY SSF46785 2 83 8.84E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 7.2E-70 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 Gene3D G3DSA:3.30.1330.50 1 158 8.5E-70 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 SUPERFAMILY SSF69765 1 157 1.26E-65 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 Pfam PF02542 YgbB family 2 155 5.8E-66 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.03 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0132 914968671ae5dcb453f916e2c5a39cee 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 SUPERFAMILY SSF54523 5 99 3.3E-14 T 15-10-2018 VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 Gene3D G3DSA:3.30.700.10 5 161 8.5E-11 T 15-10-2018 VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 5.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 Pfam PF12019 Type II transport protein GspH 41 158 4.8E-7 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 PIRSF PIRSF024622 1 170 1.2E-49 T 15-10-2018 IPR016824 Tfp pilus assembly protein FimT VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 1.9E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A0630 20255dcedbba96e990c6f237010fdd35 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.907 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 SUPERFAMILY SSF46589 14 99 3.77E-22 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 Gene3D G3DSA:3.30.930.10 8 327 5.8E-126 T 15-10-2018 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 SUPERFAMILY SSF55681 92 327 1.24E-82 T 15-10-2018 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.6E-106 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.9E-25 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VIBNI_A1402 58e3dcb5ae28e33cb8c94ab22678f196 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.9E-111 T 15-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VIBNI_A1033 6e89448b137545c7a1b381a65fd4faf9 272 Gene3D G3DSA:3.20.20.70 2 269 1.7E-55 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1033 6e89448b137545c7a1b381a65fd4faf9 272 Pfam PF05853 beta-keto acid cleavage enzyme 4 263 4.2E-52 T 15-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 VIBNI_B1177 dfc53956869755ee8b7396e003c10bd6 261 Gene3D G3DSA:1.10.3720.10 62 260 2.8E-27 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1177 dfc53956869755ee8b7396e003c10bd6 261 SUPERFAMILY SSF161098 67 252 5.63E-32 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1177 dfc53956869755ee8b7396e003c10bd6 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 259 8.0E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1177 dfc53956869755ee8b7396e003c10bd6 261 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 21 260 3.9E-78 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 467 4.8E-17 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 SUPERFAMILY SSF55604 407 481 2.22E-18 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.2E-70 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 Pfam PF00367 phosphotransferase system, EIIB 410 442 8.2E-13 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 4 479 2.8E-191 T 15-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 420 437 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A1341 4030de4ca5ffc30b8e7f53a124b2d2d5 483 Gene3D G3DSA:3.30.1360.60 403 482 5.6E-24 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A3255 3ebc06fa8c7bb1dbf382c90b34958302 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 271 2.2E-9 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A3255 3ebc06fa8c7bb1dbf382c90b34958302 273 SUPERFAMILY SSF53850 28 272 2.01E-22 T 15-10-2018 VIBNI_A3255 3ebc06fa8c7bb1dbf382c90b34958302 273 Gene3D G3DSA:3.40.190.10 112 200 5.6E-13 T 15-10-2018 VIBNI_A3255 3ebc06fa8c7bb1dbf382c90b34958302 273 Gene3D G3DSA:3.40.190.10 28 111 5.6E-13 T 15-10-2018 VIBNI_A1547 09da9b518f14e309f92d2d0eff9292e8 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 127 7.9E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A1547 09da9b518f14e309f92d2d0eff9292e8 354 Gene3D G3DSA:3.40.50.720 2 129 1.7E-32 T 15-10-2018 VIBNI_A1547 09da9b518f14e309f92d2d0eff9292e8 354 SUPERFAMILY SSF55347 142 301 4.14E-13 T 15-10-2018 VIBNI_A1547 09da9b518f14e309f92d2d0eff9292e8 354 Gene3D G3DSA:3.30.360.10 133 354 1.6E-28 T 15-10-2018 VIBNI_A1547 09da9b518f14e309f92d2d0eff9292e8 354 SUPERFAMILY SSF51735 12 160 2.12E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 SUPERFAMILY SSF118215 29 441 9.55E-92 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 Gene3D G3DSA:1.10.3860.10 5 456 9.3E-99 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.3E-99 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.4E-30 T 15-10-2018 VIBNI_A1466 93c9f3d6af6ce9e088a34b88e706d3ec 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.4E-30 T 15-10-2018 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 SMART SM00636 523 825 1.7E-4 T 15-10-2018 IPR011583 Chitinase II GO:0008061 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:2.10.10.20 13 80 1.0E-9 T 15-10-2018 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:2.60.40.10 339 427 1.5E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:2.60.40.10 430 521 2.5E-21 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:2.60.40.10 85 174 4.7E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:2.60.40.10 178 270 3.0E-26 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Pfam PF00704 Glycosyl hydrolases family 18 525 825 6.3E-26 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 SUPERFAMILY SSF51445 521 834 3.51E-49 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 15-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 SUPERFAMILY SSF51055 20 79 3.01E-12 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 SMART SM00495 30 76 1.2E-8 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 SMART SM00495 277 326 2.0E-6 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A0595 c1d55cb844f1de1153d9d4a3d8c099c7 847 Gene3D G3DSA:3.20.20.80 522 842 3.1E-77 T 15-10-2018 VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 516 6.2E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 Gene3D G3DSA:3.30.450.350 78 303 4.9E-16 T 15-10-2018 VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 SMART SM01079 74 274 5.9E-21 T 15-10-2018 IPR006189 CHASE domain VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 Gene3D G3DSA:3.30.70.270 341 518 8.8E-45 T 15-10-2018 VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 513 6.5E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 Pfam PF03924 CHASE domain 77 268 1.2E-30 T 15-10-2018 IPR006189 CHASE domain VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 SUPERFAMILY SSF55073 361 518 7.45E-39 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1543 8dcdbe651624bb7673c2c01e1c8dfeae 520 SMART SM00267 345 517 7.7E-44 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A3856 e10e23aa0590b47be57ffab7a18c7497 402 Pfam PF07690 Major Facilitator Superfamily 11 347 3.4E-36 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A3856 e10e23aa0590b47be57ffab7a18c7497 402 SUPERFAMILY SSF103473 5 378 1.83E-53 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3856 e10e23aa0590b47be57ffab7a18c7497 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 373 7.1E-80 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VIBNI_A3856 e10e23aa0590b47be57ffab7a18c7497 402 Gene3D G3DSA:1.20.1720.10 8 376 2.0E-72 T 15-10-2018 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 Pfam PF01479 S4 domain 1 44 2.7E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 SUPERFAMILY SSF55174 1 80 2.36E-12 T 15-10-2018 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 Pfam PF00849 RNA pseudouridylate synthase 61 191 2.7E-16 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 Gene3D G3DSA:3.10.290.10 1 61 3.0E-19 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 SUPERFAMILY SSF55120 60 226 1.58E-45 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.2E-49 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 Gene3D G3DSA:3.30.70.580 62 226 4.2E-59 T 15-10-2018 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 SMART SM00363 1 59 2.9E-7 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A2211 385ac9d055e2476914c178bc3b674f3d 230 Gene3D G3DSA:3.30.70.1560 127 208 4.2E-59 T 15-10-2018 VIBNI_A3702 2302c6cbcc9a76eef4c49d69218f5ee5 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 2.7E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3702 2302c6cbcc9a76eef4c49d69218f5ee5 196 SUPERFAMILY SSF46689 5 78 1.16E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A3702 2302c6cbcc9a76eef4c49d69218f5ee5 196 Gene3D G3DSA:1.10.357.10 3 196 7.7E-78 T 15-10-2018 VIBNI_A3702 2302c6cbcc9a76eef4c49d69218f5ee5 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.983 T 15-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VIBNI_A3702 2302c6cbcc9a76eef4c49d69218f5ee5 196 SUPERFAMILY SSF48498 81 191 4.71E-11 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1868 cac43941346c1bb3ae0540fe168b1211 220 Pfam PF00302 Chloramphenicol acetyltransferase 6 206 4.0E-27 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VIBNI_B1868 cac43941346c1bb3ae0540fe168b1211 220 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 15 203 1.0E-34 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VIBNI_B1868 cac43941346c1bb3ae0540fe168b1211 220 Gene3D G3DSA:3.30.559.10 2 210 9.9E-60 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VIBNI_B1868 cac43941346c1bb3ae0540fe168b1211 220 SUPERFAMILY SSF52777 6 212 9.64E-47 T 15-10-2018 VIBNI_B1868 cac43941346c1bb3ae0540fe168b1211 220 SMART SM01059 3 206 5.0E-60 T 15-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.4E-28 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.932 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 Gene3D G3DSA:1.20.5.440 92 135 9.4E-19 T 15-10-2018 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 Gene3D G3DSA:2.60.15.10 4 91 3.1E-31 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 SUPERFAMILY SSF51344 4 87 1.31E-24 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 9.0E-37 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 SUPERFAMILY SSF46604 89 138 3.66E-14 T 15-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.4E-42 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3860 6818ed01ccb072d817ec9b72da898e1f 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 4.3E-11 T 15-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VIBNI_A2287 f1f6974fa8696a600100f588767f6445 245 Gene3D G3DSA:3.20.20.70 1 245 1.1E-89 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A2287 f1f6974fa8696a600100f588767f6445 245 SUPERFAMILY SSF51366 2 242 1.28E-63 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VIBNI_A2287 f1f6974fa8696a600100f588767f6445 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.565 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VIBNI_A2287 f1f6974fa8696a600100f588767f6445 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 9.0E-78 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VIBNI_A2287 f1f6974fa8696a600100f588767f6445 245 Pfam PF00977 Histidine biosynthesis protein 2 234 7.3E-76 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VIBNI_A2080 e0d72e808e63130b02355dcaf6f365c2 138 Pfam PF00583 Acetyltransferase (GNAT) family 32 115 9.8E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2080 e0d72e808e63130b02355dcaf6f365c2 138 SUPERFAMILY SSF55729 27 137 2.13E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2080 e0d72e808e63130b02355dcaf6f365c2 138 Gene3D G3DSA:3.40.630.30 35 137 7.4E-26 T 15-10-2018 VIBNI_A0728 5b2404db04209687b60ac9bd0638cdf2 690 Pfam PF02120 Flagellar hook-length control protein FliK 559 642 2.2E-25 T 15-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VIBNI_A0728 5b2404db04209687b60ac9bd0638cdf2 690 Gene3D G3DSA:3.30.750.140 535 650 1.4E-32 T 15-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 SMART SM00863 166 208 2.0E-5 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 SUPERFAMILY SSF55186 84 210 8.11E-25 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 SUPERFAMILY SSF50447 1 83 4.24E-15 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 Gene3D G3DSA:3.30.980.10 84 212 2.1E-25 T 15-10-2018 VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 Gene3D G3DSA:2.40.30.130 1 83 1.5E-16 T 15-10-2018 VIBNI_A1251 ce307b7a7f0f7fb81f0928eefc76b780 214 Pfam PF01411 tRNA synthetases class II (A) 18 86 5.9E-9 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PIRSF PIRSF000724 1 386 6.4E-133 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.2E-82 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.183 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 Gene3D G3DSA:3.40.50.1260 165 373 5.8E-149 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 Gene3D G3DSA:3.40.50.1260 10 379 5.8E-149 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.6E-137 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A0085 d759dd9dffe1bba64232c0e27e69ecd3 386 SUPERFAMILY SSF53748 3 383 2.83E-143 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VIBNI_A1781 127eecc38167fdcea507ff8b4aa2dab8 57 Gene3D G3DSA:1.10.10.620 1 57 8.2E-29 T 15-10-2018 IPR023200 Ribosome modulation factor domain superfamily VIBNI_A1781 127eecc38167fdcea507ff8b4aa2dab8 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.932 T 15-10-2018 IPR007040 Ribosome modulation factor VIBNI_A1781 127eecc38167fdcea507ff8b4aa2dab8 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 1.0E-21 T 15-10-2018 IPR007040 Ribosome modulation factor VIBNI_A1781 127eecc38167fdcea507ff8b4aa2dab8 57 Pfam PF04957 Ribosome modulation factor 1 54 4.3E-28 T 15-10-2018 IPR007040 Ribosome modulation factor VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 Pfam PF00005 ABC transporter 337 466 2.8E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 SMART SM00382 343 511 1.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 SMART SM00382 26 238 1.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 SUPERFAMILY SSF52540 299 521 1.9E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 Gene3D G3DSA:3.40.50.300 282 530 9.9E-51 T 15-10-2018 VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 SUPERFAMILY SSF52540 4 239 1.56E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 Gene3D G3DSA:3.40.50.300 2 281 4.5E-58 T 15-10-2018 VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 Pfam PF12848 ABC transporter 224 309 1.7E-21 T 15-10-2018 IPR032781 ABC-transporter extension domain VIBNI_A1679 7327e3ad53bd2806b8400365b1d41253 530 Pfam PF00005 ABC transporter 18 184 2.3E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0967 ab366b9c819886cda79f4e591a7aa10c 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 315 1.0E-46 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0967 ab366b9c819886cda79f4e591a7aa10c 338 Gene3D G3DSA:3.40.190.170 26 338 7.6E-102 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Gene3D G3DSA:3.10.650.10 108 277 4.4E-45 T 15-10-2018 VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Gene3D G3DSA:1.10.3720.10 279 521 5.2E-68 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 SUPERFAMILY SSF160964 25 269 3.4E-70 T 15-10-2018 VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 269 7.3E-50 T 15-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Gene3D G3DSA:2.40.430.10 128 214 4.4E-45 T 15-10-2018 VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Gene3D G3DSA:1.20.58.370 17 105 2.9E-32 T 15-10-2018 IPR035277 MalF, N-terminal VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 SUPERFAMILY SSF161098 272 512 1.31E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1629 7086e5c19887cd5686154db9aa86e089 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 511 1.7E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1704 6eadac60ac0de8140605794162124af2 125 SUPERFAMILY SSF55811 6 111 6.23E-20 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A1704 6eadac60ac0de8140605794162124af2 125 Gene3D G3DSA:3.90.79.10 1 125 1.0E-22 T 15-10-2018 VIBNI_A1704 6eadac60ac0de8140605794162124af2 125 Pfam PF00293 NUDIX domain 8 115 2.7E-12 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 Gene3D G3DSA:2.40.10.10 23 264 2.4E-61 T 15-10-2018 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 Pfam PF00089 Trypsin 32 260 1.3E-53 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 SUPERFAMILY SSF50494 5 264 2.02E-65 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 SMART SM00020 31 260 1.7E-63 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 70 75 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 60 75 2.5E-10 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 116 130 2.5E-10 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0301 e763984d0dd0ba756d440e724ff10f23 274 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.5E-10 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A3814 fbd80c69ade5ab39b86b57290a401145 253 SUPERFAMILY SSF110399 1 235 1.05E-83 T 15-10-2018 VIBNI_A3814 fbd80c69ade5ab39b86b57290a401145 253 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.129 T 15-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VIBNI_A3814 fbd80c69ade5ab39b86b57290a401145 253 Gene3D G3DSA:3.20.20.70 1 253 1.6E-111 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3814 fbd80c69ade5ab39b86b57290a401145 253 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 5.9E-110 T 15-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VIBNI_B1601 2fda5e92fc632c275cd3683a5b7eec68 288 SUPERFAMILY SSF53448 2 271 2.04E-65 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1601 2fda5e92fc632c275cd3683a5b7eec68 288 Gene3D G3DSA:3.90.550.10 1 275 1.8E-82 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1601 2fda5e92fc632c275cd3683a5b7eec68 288 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 3.6E-124 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VIBNI_B1601 2fda5e92fc632c275cd3683a5b7eec68 288 Pfam PF00483 Nucleotidyl transferase 9 265 3.4E-32 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VIBNI_A1091 c42ca232b9a2d85be670dde8587ce7ca 219 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 204 9.4E-11 T 15-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 Gene3D G3DSA:3.30.565.10 302 447 2.2E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 SMART SM00387 342 448 7.6E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 445 9.2E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 4.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 4.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 4.6E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 Gene3D G3DSA:1.10.287.130 186 294 1.3E-6 T 15-10-2018 VIBNI_A2899 b110eadbf9cba554226ded3484257f6d 453 SUPERFAMILY SSF55874 306 445 3.67E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 SUPERFAMILY SSF63411 518 721 1.0E-45 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Pfam PF00675 Insulinase (Peptidase family M16) 61 177 3.6E-17 T 15-10-2018 IPR011765 Peptidase M16, N-terminal VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Pfam PF00675 Insulinase (Peptidase family M16) 537 650 2.5E-13 T 15-10-2018 IPR011765 Peptidase M16, N-terminal VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Pfam PF05193 Peptidase M16 inactive domain 218 391 6.8E-27 T 15-10-2018 IPR007863 Peptidase M16, C-terminal VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Pfam PF05193 Peptidase M16 inactive domain 684 855 6.2E-24 T 15-10-2018 IPR007863 Peptidase M16, C-terminal VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 SUPERFAMILY SSF63411 49 266 3.06E-55 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Gene3D G3DSA:3.30.830.10 276 470 8.4E-31 T 15-10-2018 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Gene3D G3DSA:3.30.830.10 46 269 2.9E-65 T 15-10-2018 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Gene3D G3DSA:3.30.830.10 740 934 5.2E-37 T 15-10-2018 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 Gene3D G3DSA:3.30.830.10 524 728 7.8E-44 T 15-10-2018 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 SUPERFAMILY SSF63411 737 941 1.53E-37 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_A0157 3b4992e540f2fc07272b121f5d833d48 950 SUPERFAMILY SSF63411 280 465 6.0E-29 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VIBNI_B1017 90ae91cf0b69a9d5f609afacecb7dfbf 329 Gene3D G3DSA:1.10.10.60 7 58 7.6E-19 T 15-10-2018 VIBNI_B1017 90ae91cf0b69a9d5f609afacecb7dfbf 329 Pfam PF04198 Putative sugar-binding domain 65 319 4.3E-77 T 15-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VIBNI_B1017 90ae91cf0b69a9d5f609afacecb7dfbf 329 Gene3D G3DSA:3.40.50.1360 59 324 2.6E-80 T 15-10-2018 VIBNI_B1017 90ae91cf0b69a9d5f609afacecb7dfbf 329 SUPERFAMILY SSF100950 69 319 1.59E-63 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A3098 82250ea1ff0a196e57d3667ccc6bd6bb 298 PRINTS PR00313 NodO calcium binding signature 138 146 6.9E-5 T 15-10-2018 VIBNI_A3098 82250ea1ff0a196e57d3667ccc6bd6bb 298 PRINTS PR00313 NodO calcium binding signature 162 170 6.9E-5 T 15-10-2018 VIBNI_A3098 82250ea1ff0a196e57d3667ccc6bd6bb 298 PRINTS PR00313 NodO calcium binding signature 187 196 6.9E-5 T 15-10-2018 VIBNI_A3098 82250ea1ff0a196e57d3667ccc6bd6bb 298 PRINTS PR00313 NodO calcium binding signature 109 120 6.9E-5 T 15-10-2018 VIBNI_A1788 509b2f10e198ecfd23181576dfb30b72 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 15-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VIBNI_A1788 509b2f10e198ecfd23181576dfb30b72 1613 SUPERFAMILY SSF53223 754 940 4.41E-26 T 15-10-2018 VIBNI_A1788 509b2f10e198ecfd23181576dfb30b72 1613 SUPERFAMILY SSF51735 945 1280 1.31E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1788 509b2f10e198ecfd23181576dfb30b72 1613 PIRSF PIRSF036761 1 1610 0.0 T 15-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VIBNI_B0921 7ac9412e4b70b7412849e23d7eef8285 528 PIRSF PIRSF006446 352 522 4.4E-31 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_B0921 7ac9412e4b70b7412849e23d7eef8285 528 PIRSF PIRSF006446 1 328 7.7E-115 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_B0921 7ac9412e4b70b7412849e23d7eef8285 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 8.5E-174 T 15-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VIBNI_A2700 5e11e3e89048cd9790f04ac8700a89b6 368 Gene3D G3DSA:3.40.190.10 162 357 2.1E-5 T 15-10-2018 VIBNI_A2700 5e11e3e89048cd9790f04ac8700a89b6 368 SUPERFAMILY SSF53850 50 332 7.17E-16 T 15-10-2018 VIBNI_A2700 5e11e3e89048cd9790f04ac8700a89b6 368 Gene3D G3DSA:3.40.190.10 30 131 7.4E-6 T 15-10-2018 VIBNI_A1490 19b1f932829e849481782b1d9ffb852e 105 Gene3D G3DSA:3.30.750.24 10 105 2.3E-16 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A1490 19b1f932829e849481782b1d9ffb852e 105 SUPERFAMILY SSF52091 7 101 3.92E-19 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_A1490 19b1f932829e849481782b1d9ffb852e 105 Pfam PF13466 STAS domain 15 95 5.0E-11 T 15-10-2018 IPR002645 STAS domain VIBNI_A2126 4644fc1d1694cc40b72cf281e7448a17 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 87 2.4E-18 T 15-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VIBNI_A2126 4644fc1d1694cc40b72cf281e7448a17 233 PIRSF PIRSF037208 1 233 1.0E-81 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VIBNI_A2126 4644fc1d1694cc40b72cf281e7448a17 233 SUPERFAMILY SSF55729 82 232 1.62E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2126 4644fc1d1694cc40b72cf281e7448a17 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 7 232 35.006 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VIBNI_A2126 4644fc1d1694cc40b72cf281e7448a17 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 1.5E-30 T 15-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VIBNI_A2759 a7bea8798580f1b8dfc5b176dc3ab647 309 SUPERFAMILY SSF55136 179 308 7.85E-11 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A2759 a7bea8798580f1b8dfc5b176dc3ab647 309 Gene3D G3DSA:3.20.80.10 158 307 9.2E-21 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VIBNI_A2759 a7bea8798580f1b8dfc5b176dc3ab647 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 147 2.1E-15 T 15-10-2018 IPR019587 Polyketide cyclase/dehydrase VIBNI_A2759 a7bea8798580f1b8dfc5b176dc3ab647 309 Gene3D G3DSA:3.30.530.20 4 154 2.5E-10 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_A2759 a7bea8798580f1b8dfc5b176dc3ab647 309 SUPERFAMILY SSF55961 7 145 1.13E-10 T 15-10-2018 VIBNI_A2730 a7167031a4c5af07e3c188a159c1e4cd 112 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 27 89 2.4E-11 T 15-10-2018 IPR018660 C-type lysozyme inhibitor VIBNI_A2730 a7167031a4c5af07e3c188a159c1e4cd 112 Gene3D G3DSA:2.40.128.200 23 102 2.5E-13 T 15-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VIBNI_A2730 a7167031a4c5af07e3c188a159c1e4cd 112 SUPERFAMILY SSF141488 23 99 7.85E-14 T 15-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VIBNI_A2554 05a8c7cf70ae0ea340072baacaae7af0 278 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 27 278 1.4E-16 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VIBNI_A2396 a8f3f78927f6f9ec67afcafd4b585e89 486 SUPERFAMILY SSF55073 337 486 3.53E-35 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2396 a8f3f78927f6f9ec67afcafd4b585e89 486 SMART SM00267 321 486 9.9E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2396 a8f3f78927f6f9ec67afcafd4b585e89 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 3.8E-35 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2396 a8f3f78927f6f9ec67afcafd4b585e89 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 485 1.1E-38 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2396 a8f3f78927f6f9ec67afcafd4b585e89 486 Gene3D G3DSA:3.30.70.270 320 486 2.5E-42 T 15-10-2018 VIBNI_A3470 85cb9d63d5102b44ef40292129d8cd8b 146 Gene3D G3DSA:3.30.530.20 1 143 7.3E-26 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_A3470 85cb9d63d5102b44ef40292129d8cd8b 146 SUPERFAMILY SSF55961 4 142 3.37E-26 T 15-10-2018 VIBNI_A3470 85cb9d63d5102b44ef40292129d8cd8b 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 115 2.0E-8 T 15-10-2018 IPR019587 Polyketide cyclase/dehydrase VIBNI_B1457 1ed29fe338f5a3e6dc2f75912882b04c 296 Pfam PF00892 EamA-like transporter family 7 131 2.4E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1457 1ed29fe338f5a3e6dc2f75912882b04c 296 Pfam PF00892 EamA-like transporter family 142 280 5.0E-14 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1457 1ed29fe338f5a3e6dc2f75912882b04c 296 SUPERFAMILY SSF103481 194 282 3.66E-8 T 15-10-2018 VIBNI_B1457 1ed29fe338f5a3e6dc2f75912882b04c 296 SUPERFAMILY SSF103481 42 132 6.02E-7 T 15-10-2018 VIBNI_B0887 1d474b9080becde73e4adb8a5452e39a 638 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 140 1.4E-12 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_B0887 1d474b9080becde73e4adb8a5452e39a 638 Gene3D G3DSA:2.170.130.10 34 145 5.8E-38 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_B0887 1d474b9080becde73e4adb8a5452e39a 638 SUPERFAMILY SSF56935 43 638 9.42E-92 T 15-10-2018 VIBNI_B0887 1d474b9080becde73e4adb8a5452e39a 638 Pfam PF00593 TonB dependent receptor 181 637 9.0E-45 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_B0887 1d474b9080becde73e4adb8a5452e39a 638 Gene3D G3DSA:2.40.170.20 146 638 6.7E-116 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 SUPERFAMILY SSF46689 6 79 2.51E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 SUPERFAMILY SSF53697 101 267 1.17E-38 T 15-10-2018 VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 80 7.0E-22 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 Pfam PF01380 SIS domain 129 258 3.9E-22 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 Gene3D G3DSA:1.10.10.10 2 83 1.9E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1784 3691e6337ebd484a8598e7aa87f39597 290 Gene3D G3DSA:3.40.50.10490 98 281 1.3E-43 T 15-10-2018 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 SUPERFAMILY SSF55620 3 117 2.95E-37 T 15-10-2018 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 SMART SM00905 6 116 5.5E-49 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 6.0E-30 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 3.7E-32 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 Gene3D G3DSA:3.30.1130.10 1 118 5.3E-46 T 15-10-2018 VIBNI_A2863 40b4d6c906ae954c49b3ce12c18d070e 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 4.0E-37 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VIBNI_B0903 e2275ef3019e9cd83051d382a1f43d5b 175 SUPERFAMILY SSF55729 73 136 1.99E-5 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0903 e2275ef3019e9cd83051d382a1f43d5b 175 Gene3D G3DSA:3.40.630.30 21 173 6.5E-6 T 15-10-2018 VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 234 5.7E-82 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 109 116 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 233 3.0E-80 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 233 44.011 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 Gene3D G3DSA:3.90.550.10 5 236 1.3E-79 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A0131 4c2c620683196b7de51920c2f5538112 237 SUPERFAMILY SSF53448 11 234 6.88E-65 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1659 9e0ca5d7980f80c1b5875ad0eea8d599 524 SUPERFAMILY SSF48537 24 266 1.96E-55 T 15-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 VIBNI_B1659 9e0ca5d7980f80c1b5875ad0eea8d599 524 Pfam PF04231 Endonuclease I 302 513 1.1E-37 T 15-10-2018 IPR007346 Endonuclease I GO:0004518 VIBNI_B1659 9e0ca5d7980f80c1b5875ad0eea8d599 524 SUPERFAMILY SSF54060 299 513 1.18E-48 T 15-10-2018 VIBNI_B1659 9e0ca5d7980f80c1b5875ad0eea8d599 524 Pfam PF02265 S1/P1 Nuclease 24 268 9.1E-63 T 15-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 VIBNI_B1659 9e0ca5d7980f80c1b5875ad0eea8d599 524 Gene3D G3DSA:1.10.575.10 24 277 6.6E-67 T 15-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 VIBNI_A1043 34f6fc51183b13b495a28921a5c13ede 444 Pfam PF07394 Protein of unknown function (DUF1501) 38 421 8.0E-56 T 15-10-2018 IPR010869 Protein of unknown function DUF1501 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 Gene3D G3DSA:3.40.50.300 322 574 1.0E-85 T 15-10-2018 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 SUPERFAMILY SSF90123 20 318 2.88E-47 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 Pfam PF00664 ABC transporter transmembrane region 53 287 8.7E-15 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 SUPERFAMILY SSF52540 323 564 2.51E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 SMART SM00382 354 540 3.5E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 Pfam PF00005 ABC transporter 345 494 6.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1520 98ea1f204fb9222ba01d18b18b86ba0a 575 Gene3D G3DSA:1.20.1560.10 16 318 1.9E-39 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 214 225 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 Gene3D G3DSA:2.40.10.10 19 265 3.3E-55 T 15-10-2018 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 SMART SM00020 26 261 8.2E-52 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 SUPERFAMILY SSF50494 18 266 5.33E-60 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 Pfam PF00089 Trypsin 27 261 2.5E-46 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 213 225 6.0E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 6.0E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B1892 c3ff6d8cae63684bac8f7ab11fa4d054 272 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 6.0E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0500 6e48f20918e932f172428797e1b7a84b 205 Pfam PF01810 LysE type translocator 12 203 9.8E-34 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0500 6e48f20918e932f172428797e1b7a84b 205 PIRSF PIRSF006324 1 205 1.6E-49 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A0464 0d19e14dcdd37dbc211a68e537f4a108 215 Gene3D G3DSA:1.25.40.340 3 210 1.4E-57 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VIBNI_A0464 0d19e14dcdd37dbc211a68e537f4a108 215 SUPERFAMILY SSF101473 5 207 1.57E-49 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VIBNI_A0464 0d19e14dcdd37dbc211a68e537f4a108 215 SMART SM01120 33 207 1.7E-63 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VIBNI_A0464 0d19e14dcdd37dbc211a68e537f4a108 215 Pfam PF02734 DAK2 domain 34 206 1.1E-50 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VIBNI_A0464 0d19e14dcdd37dbc211a68e537f4a108 215 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 11 206 2.7E-52 T 15-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 VIBNI_B1356 2d2c8405ff5c327f6653c804d53ca475 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 2.5E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1356 2d2c8405ff5c327f6653c804d53ca475 338 SUPERFAMILY SSF161098 132 319 1.07E-18 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1356 2d2c8405ff5c327f6653c804d53ca475 338 Gene3D G3DSA:1.10.3720.10 127 332 2.4E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1356 2d2c8405ff5c327f6653c804d53ca475 338 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 43 1.2E-8 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_A1873 19d5ab4ccdaf8f1614fbd7b8a7134825 304 SUPERFAMILY SSF103481 226 303 1.57E-9 T 15-10-2018 VIBNI_A1873 19d5ab4ccdaf8f1614fbd7b8a7134825 304 SUPERFAMILY SSF103481 57 158 1.83E-10 T 15-10-2018 VIBNI_A1873 19d5ab4ccdaf8f1614fbd7b8a7134825 304 Pfam PF00892 EamA-like transporter family 167 302 5.7E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A1873 19d5ab4ccdaf8f1614fbd7b8a7134825 304 Pfam PF00892 EamA-like transporter family 22 154 5.6E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A2836 afe3a81115c9faba9b45e50b0f596161 409 Pfam PF00909 Ammonium Transporter Family 18 402 2.5E-100 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VIBNI_A2836 afe3a81115c9faba9b45e50b0f596161 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 8.4E-204 T 15-10-2018 IPR019879 Ammonium transporter, marine subtype VIBNI_A2836 afe3a81115c9faba9b45e50b0f596161 409 Gene3D G3DSA:1.10.3430.10 2 408 8.7E-117 T 15-10-2018 IPR029020 Ammonium/urea transporter VIBNI_A2836 afe3a81115c9faba9b45e50b0f596161 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VIBNI_A2836 afe3a81115c9faba9b45e50b0f596161 409 SUPERFAMILY SSF111352 12 383 4.97E-104 T 15-10-2018 VIBNI_A0873 d84162c7cb17a19c7ca883ce6bb8a5dd 2024 Pfam PF12920 TcdA/TcdB pore forming domain 729 1388 1.4E-203 T 15-10-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 125 201 1.6E-17 T 15-10-2018 IPR006260 TonB/TolA, C-terminal VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 Gene3D G3DSA:3.30.1150.10 102 203 1.1E-28 T 15-10-2018 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 6.4E-15 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 140 158 6.4E-15 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 176 6.4E-15 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 119 140 6.4E-15 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 SUPERFAMILY SSF74653 116 192 2.62E-23 T 15-10-2018 VIBNI_A0397 4c8e3d3fa4ec633c35b55f2d0fc57e8c 204 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 124 201 2.4E-21 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 VIBNI_A2556 b636908dadbb1a36c233232c6e224a32 523 Pfam PF00501 AMP-binding enzyme 12 424 9.9E-76 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2556 b636908dadbb1a36c233232c6e224a32 523 Gene3D G3DSA:3.40.50.12780 3 419 1.9E-115 T 15-10-2018 VIBNI_A2556 b636908dadbb1a36c233232c6e224a32 523 Gene3D G3DSA:3.30.300.30 420 522 2.8E-21 T 15-10-2018 VIBNI_A2556 b636908dadbb1a36c233232c6e224a32 523 SUPERFAMILY SSF56801 6 520 3.53E-111 T 15-10-2018 VIBNI_A2556 b636908dadbb1a36c233232c6e224a32 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 15-10-2018 IPR020845 AMP-binding, conserved site VIBNI_B1337 009e850ab45e0622457370b931bb3287 123 Gene3D G3DSA:3.10.180.10 4 122 2.0E-14 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1337 009e850ab45e0622457370b931bb3287 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 116 5.7E-5 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B1337 009e850ab45e0622457370b931bb3287 123 SUPERFAMILY SSF54593 7 122 5.23E-20 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1794 9cdd374d5e74bd5bb4c55b8940e23551 157 Gene3D G3DSA:3.30.450.40 2 157 6.3E-63 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_A1794 9cdd374d5e74bd5bb4c55b8940e23551 157 SUPERFAMILY SSF55781 5 145 2.42E-38 T 15-10-2018 VIBNI_A1794 9cdd374d5e74bd5bb4c55b8940e23551 157 Pfam PF13185 GAF domain 42 146 5.8E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 VIBNI_A2048 b439bbe463c15745c46bfcdf4a0cc1aa 131 SUPERFAMILY SSF53850 15 128 1.52E-11 T 15-10-2018 VIBNI_A2048 b439bbe463c15745c46bfcdf4a0cc1aa 131 Gene3D G3DSA:3.40.190.10 17 130 3.8E-8 T 15-10-2018 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.7E-37 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Gene3D G3DSA:3.40.50.20 1 85 1.2E-33 T 15-10-2018 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 SUPERFAMILY SSF56059 83 345 6.19E-70 T 15-10-2018 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Gene3D G3DSA:3.30.470.20 86 433 4.3E-155 T 15-10-2018 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 7.8E-242 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 SUPERFAMILY SSF51246 331 444 8.89E-42 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.2E-83 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.0E-42 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 SUPERFAMILY SSF52440 1 113 2.73E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 SMART SM00878 336 441 7.5E-63 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VIBNI_A3303 a7b4776328bce70d367c0c428193809e 447 Gene3D G3DSA:3.30.1490.20 131 203 4.3E-155 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A0990 7ea0f7bae5a8ff3f47e5834b5e424f17 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 110 1.8E-4 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_A0990 7ea0f7bae5a8ff3f47e5834b5e424f17 117 Gene3D G3DSA:3.10.180.10 1 115 5.2E-18 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0990 7ea0f7bae5a8ff3f47e5834b5e424f17 117 SUPERFAMILY SSF54593 1 114 8.73E-20 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2136 58e4d2f228fe37c07fc436863db1e8e0 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 2.5E-75 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD VIBNI_A2136 58e4d2f228fe37c07fc436863db1e8e0 205 SUPERFAMILY SSF101322 2 204 3.92E-78 T 15-10-2018 IPR035932 HflD-like superfamily VIBNI_A2136 58e4d2f228fe37c07fc436863db1e8e0 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 1.0E-91 T 15-10-2018 VIBNI_A2136 58e4d2f228fe37c07fc436863db1e8e0 205 Gene3D G3DSA:1.10.3890.10 1 205 1.6E-76 T 15-10-2018 IPR035932 HflD-like superfamily VIBNI_A2136 58e4d2f228fe37c07fc436863db1e8e0 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.387 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 PIRSF PIRSF005572 2 348 6.5E-101 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 SUPERFAMILY SSF53383 4 345 3.67E-82 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 Gene3D G3DSA:3.40.640.10 60 236 1.9E-114 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 Pfam PF00266 Aminotransferase class-V 4 342 4.5E-66 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 Gene3D G3DSA:1.10.260.50 14 271 1.9E-114 T 15-10-2018 VIBNI_A2237 99db265e85d8ffedd6bc461b1497c7ec 350 Gene3D G3DSA:3.90.1150.10 4 344 1.9E-114 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2509 1a532ce0c7d2a0b7b5bdfa35ce8071fd 105 Pfam PF04287 tRNA pseudouridine synthase C 5 100 1.5E-32 T 15-10-2018 IPR023376 YqcC-like domain VIBNI_A2509 1a532ce0c7d2a0b7b5bdfa35ce8071fd 105 Gene3D G3DSA:1.20.1440.40 1 103 5.0E-33 T 15-10-2018 IPR036814 YqcC-like superfamily VIBNI_A2509 1a532ce0c7d2a0b7b5bdfa35ce8071fd 105 PIRSF PIRSF006257 1 104 2.8E-35 T 15-10-2018 IPR007384 Protein of unknown function UCP006257 VIBNI_A2509 1a532ce0c7d2a0b7b5bdfa35ce8071fd 105 SUPERFAMILY SSF158452 4 103 1.96E-32 T 15-10-2018 IPR036814 YqcC-like superfamily VIBNI_A0541 cc60e8ca4e7af6d11f9315db48cd851a 103 Gene3D G3DSA:1.10.10.710 21 99 1.3E-8 T 15-10-2018 IPR038627 YebG-like superfamily VIBNI_A0541 cc60e8ca4e7af6d11f9315db48cd851a 103 Pfam PF07130 YebG protein 1 72 1.5E-31 T 15-10-2018 IPR009813 Uncharacterised protein family YebG VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 PRINTS PR00990 Ribokinase signature 173 188 1.8E-34 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 PRINTS PR00990 Ribokinase signature 33 52 1.8E-34 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 PRINTS PR00990 Ribokinase signature 105 118 1.8E-34 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 PRINTS PR00990 Ribokinase signature 6 27 1.8E-34 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 PRINTS PR00990 Ribokinase signature 217 228 1.8E-34 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 Gene3D G3DSA:3.40.1190.20 1 300 4.8E-108 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 2.9E-112 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.645 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.5E-77 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B0129 d03e82dc7dd08f409dec74077a2986b4 308 SUPERFAMILY SSF53613 1 302 1.18E-86 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A2619 45505c21ca1c7fd0b551213be3ce6154 345 SUPERFAMILY SSF56935 25 345 2.08E-40 T 15-10-2018 VIBNI_A2619 45505c21ca1c7fd0b551213be3ce6154 345 Gene3D G3DSA:2.40.160.10 20 345 2.0E-43 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_A2619 45505c21ca1c7fd0b551213be3ce6154 345 Pfam PF13609 Gram-negative porin 12 322 2.8E-25 T 15-10-2018 VIBNI_A2611 c5fc734fba99181ba5543c6dd4959749 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 3.1E-14 T 15-10-2018 IPR013549 Domain of unknown function DUF1731 VIBNI_A2611 c5fc734fba99181ba5543c6dd4959749 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 9.3E-103 T 15-10-2018 IPR010099 Epimerase family protein SDR39U1 VIBNI_A2611 c5fc734fba99181ba5543c6dd4959749 304 Gene3D G3DSA:3.40.50.720 2 303 3.3E-75 T 15-10-2018 VIBNI_A2611 c5fc734fba99181ba5543c6dd4959749 304 SUPERFAMILY SSF51735 1 301 5.89E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2611 c5fc734fba99181ba5543c6dd4959749 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 2.7E-20 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A2301 fd73bdcb7d112752c1036388fec949fa 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 3.2E-45 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 Pfam PF00571 CBS domain 80 127 5.4E-10 T 15-10-2018 IPR000644 CBS domain VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 Pfam PF00571 CBS domain 4 58 1.6E-13 T 15-10-2018 IPR000644 CBS domain VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 SUPERFAMILY SSF54631 1 133 2.02E-32 T 15-10-2018 VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 SMART SM00116 84 131 4.7E-8 T 15-10-2018 IPR000644 CBS domain VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 SMART SM00116 11 59 1.4E-8 T 15-10-2018 IPR000644 CBS domain VIBNI_A0421 f367e1192e4401c6505be05042a6acbc 147 Gene3D G3DSA:3.10.580.10 1 147 1.5E-50 T 15-10-2018 VIBNI_A2517 6dc262b459f2c3638f0be2b376f2498c 184 Gene3D G3DSA:3.40.1580.20 1 181 4.6E-69 T 15-10-2018 IPR038228 Syd superfamily VIBNI_A2517 6dc262b459f2c3638f0be2b376f2498c 184 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.8E-68 T 15-10-2018 IPR009948 Syd GO:0009898 VIBNI_A2517 6dc262b459f2c3638f0be2b376f2498c 184 Hamap MF_01104 Protein Syd [syd]. 3 181 36.711 T 15-10-2018 IPR009948 Syd GO:0009898 VIBNI_A1363 a63ebfbfdddde01ba033c1f27192c867 129 Pfam PF04024 PspC domain 5 62 3.2E-16 T 15-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VIBNI_A1363 a63ebfbfdddde01ba033c1f27192c867 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 4 129 9.7E-47 T 15-10-2018 IPR014320 Phage shock protein, PspC VIBNI_B0486 4a20754f8fd29a182c77a65085c60267 355 Pfam PF01032 FecCD transport family 40 350 2.5E-85 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B0486 4a20754f8fd29a182c77a65085c60267 355 SUPERFAMILY SSF81345 19 350 3.01E-77 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0486 4a20754f8fd29a182c77a65085c60267 355 Gene3D G3DSA:1.10.3470.10 24 355 2.7E-94 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B1829 c2085da5d2b47d063fe0178a2f09b2c8 335 Pfam PF02958 Ecdysteroid kinase 201 276 4.6E-11 T 15-10-2018 IPR004119 Protein of unknown function DUF227 VIBNI_B1829 c2085da5d2b47d063fe0178a2f09b2c8 335 SUPERFAMILY SSF56112 41 314 5.25E-24 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_B1829 c2085da5d2b47d063fe0178a2f09b2c8 335 SMART SM00587 122 279 2.8E-4 T 15-10-2018 IPR015897 CHK kinase-like VIBNI_B1829 c2085da5d2b47d063fe0178a2f09b2c8 335 Gene3D G3DSA:3.90.1200.10 127 328 2.8E-6 T 15-10-2018 VIBNI_B1769 c3a2b261cf5d1d328efb2b5559c980a9 305 Pfam PF01545 Cation efflux family 14 220 4.4E-21 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VIBNI_B1769 c3a2b261cf5d1d328efb2b5559c980a9 305 Gene3D G3DSA:1.20.1510.10 10 220 6.8E-10 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_B1769 c3a2b261cf5d1d328efb2b5559c980a9 305 SUPERFAMILY SSF161111 8 222 3.66E-17 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VIBNI_A0417 3896d3b169cb35bb85f257af7eceb170 202 Gene3D G3DSA:3.40.30.10 1 197 7.6E-73 T 15-10-2018 VIBNI_A0417 3896d3b169cb35bb85f257af7eceb170 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 3.3E-8 T 15-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_A0417 3896d3b169cb35bb85f257af7eceb170 202 PIRSF PIRSF000239 1 201 1.3E-59 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_A0417 3896d3b169cb35bb85f257af7eceb170 202 SUPERFAMILY SSF52833 1 196 9.26E-67 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A0417 3896d3b169cb35bb85f257af7eceb170 202 Pfam PF00578 AhpC/TSA family 4 139 7.4E-35 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 15-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.907 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 SMART SM01219 1 104 1.9E-54 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 SUPERFAMILY SSF55387 1 103 1.73E-38 T 15-10-2018 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 Pfam PF01491 Frataxin-like domain 1 100 2.7E-29 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.9E-42 T 15-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3769 29b78417b5e152126a788eb314b5265b 104 Gene3D G3DSA:3.30.920.10 1 104 7.4E-38 T 15-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VIBNI_A3659 599ec0e5dff1bba22a59a7d50b0b9a4d 341 Pfam PF00534 Glycosyl transferases group 1 169 293 3.2E-18 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 VIBNI_A3659 599ec0e5dff1bba22a59a7d50b0b9a4d 341 SUPERFAMILY SSF53756 4 289 1.88E-43 T 15-10-2018 VIBNI_A3659 599ec0e5dff1bba22a59a7d50b0b9a4d 341 Pfam PF13439 Glycosyltransferase Family 4 21 167 2.0E-11 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_A3659 599ec0e5dff1bba22a59a7d50b0b9a4d 341 Gene3D G3DSA:3.40.50.2000 18 164 1.1E-41 T 15-10-2018 VIBNI_A3659 599ec0e5dff1bba22a59a7d50b0b9a4d 341 Gene3D G3DSA:3.40.50.2000 165 287 1.1E-41 T 15-10-2018 VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 457 6.3E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 Gene3D G3DSA:3.30.450.20 34 212 5.3E-47 T 15-10-2018 VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 SMART SM00387 359 460 9.9E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 SMART SM01049 48 139 7.3E-27 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 Pfam PF17200 Single Cache domain 2 53 198 3.1E-44 T 15-10-2018 IPR033480 Single Cache domain 2 VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 Gene3D G3DSA:3.30.565.10 319 459 5.8E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 SUPERFAMILY SSF55874 323 456 1.05E-20 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1858 b7a5abeca7ec0e55e184aa1ac0025205 461 Pfam PF07730 Histidine kinase 256 321 6.7E-14 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VIBNI_A3215 4b65c01cf94b7f516c6a4bdb9503301c 347 SMART SM00244 18 241 3.3E-40 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A3215 4b65c01cf94b7f516c6a4bdb9503301c 347 Pfam PF01145 SPFH domain / Band 7 family 22 256 2.5E-28 T 15-10-2018 IPR001107 Band 7 domain VIBNI_A3215 4b65c01cf94b7f516c6a4bdb9503301c 347 TIGRFAM TIGR01932 hflC: HflC protein 68 341 2.0E-114 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VIBNI_A3215 4b65c01cf94b7f516c6a4bdb9503301c 347 PIRSF PIRSF005651 1 347 6.6E-90 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VIBNI_A3215 4b65c01cf94b7f516c6a4bdb9503301c 347 SUPERFAMILY SSF117892 79 246 2.62E-22 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 Pfam PF01578 Cytochrome C assembly protein 25 184 6.1E-33 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.4E-85 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A0753 782ad9ed1d3f48748da630a3c5e7a58c 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.6E-65 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Pfam PF00970 Oxidoreductase FAD-binding domain 155 253 2.3E-12 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 SUPERFAMILY SSF63380 148 253 1.56E-30 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Hamap MF_01252 Flavohemoprotein [hmp]. 1 390 54.216 T 15-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Pfam PF00042 Globin 8 102 7.7E-13 T 15-10-2018 IPR000971 Globin GO:0020037 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 6.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 352 360 6.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 6.0E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Gene3D G3DSA:3.40.50.80 255 389 3.0E-30 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Gene3D G3DSA:2.40.30.10 149 254 4.4E-34 T 15-10-2018 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 SUPERFAMILY SSF52343 255 388 1.83E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Gene3D G3DSA:1.10.490.10 1 142 2.4E-48 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.3E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 352 360 1.3E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.3E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.3E-6 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 Pfam PF00175 Oxidoreductase NAD-binding domain 264 366 1.2E-15 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VIBNI_A3211 6ebdd217ed771134f591678aa76d10cc 390 SUPERFAMILY SSF46458 1 141 1.36E-35 T 15-10-2018 IPR009050 Globin-like superfamily VIBNI_A3413 7e03ce7fed859b07972a89152bf80e8d 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 25.059 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VIBNI_A3413 7e03ce7fed859b07972a89152bf80e8d 83 Pfam PF02416 mttA/Hcf106 family 4 54 7.6E-15 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VIBNI_A3413 7e03ce7fed859b07972a89152bf80e8d 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.3E-23 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VIBNI_A1069 51ff8e5bd363bd082718dac39d0d0420 181 SUPERFAMILY SSF55729 6 179 6.49E-42 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1069 51ff8e5bd363bd082718dac39d0d0420 181 Gene3D G3DSA:3.40.630.30 3 180 1.5E-44 T 15-10-2018 VIBNI_A1069 51ff8e5bd363bd082718dac39d0d0420 181 Pfam PF13302 Acetyltransferase (GNAT) domain 13 154 5.9E-24 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0253 f00ac31f4c5d19f4480db46fe43f1431 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 310 9.3E-47 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1991 1a8074b07ea8accd33d57d95165e60bb 382 Gene3D G3DSA:3.40.50.1970 1 180 1.2E-49 T 15-10-2018 VIBNI_B1991 1a8074b07ea8accd33d57d95165e60bb 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 352 1.4E-82 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_B1991 1a8074b07ea8accd33d57d95165e60bb 382 Gene3D G3DSA:1.20.1090.10 181 381 6.1E-34 T 15-10-2018 VIBNI_B1991 1a8074b07ea8accd33d57d95165e60bb 382 SUPERFAMILY SSF56796 3 378 1.07E-94 T 15-10-2018 VIBNI_A0848 3bffc8c666f5b0f358691d5744458102 182 SUPERFAMILY SSF55469 1 181 3.14E-42 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A0848 3bffc8c666f5b0f358691d5744458102 182 Pfam PF00881 Nitroreductase family 8 161 2.3E-25 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VIBNI_A0848 3bffc8c666f5b0f358691d5744458102 182 PIRSF PIRSF000232 1 182 3.0E-62 T 15-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VIBNI_A0848 3bffc8c666f5b0f358691d5744458102 182 Gene3D G3DSA:3.40.109.10 1 182 3.1E-42 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A3044 2a9bf2582138024653d36feff3e2e696 266 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 17 70 4.7E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_A3044 2a9bf2582138024653d36feff3e2e696 266 SUPERFAMILY SSF47413 10 70 7.03E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.6E-41 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.0E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.0E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.0E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 SUPERFAMILY SSF51735 4 250 8.32E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 Gene3D G3DSA:3.40.50.720 1 251 7.7E-77 T 15-10-2018 VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 5.7E-56 T 15-10-2018 VIBNI_B0397 0860d8fd7df91f400596d285deaa7cd2 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 2.8E-118 T 15-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 SUPERFAMILY SSF51735 7 261 1.59E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 Gene3D G3DSA:3.40.50.720 1 262 4.1E-84 T 15-10-2018 VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 260 6.3E-69 T 15-10-2018 VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 5.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 5.4E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2593 935bdabf10f1e7d8df147c72f5f58485 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 9.8E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0524 61f5818acaa4cb440f0470c9541b0248 130 Pfam PF12614 Ribosome recycling factor 4 128 6.1E-48 T 15-10-2018 IPR022253 Ribosome recycling factor. bacterial VIBNI_A0570 798a0bccf367c52547890c4ff9a989d9 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.2E-59 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_A0570 798a0bccf367c52547890c4ff9a989d9 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.785 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VIBNI_A0570 798a0bccf367c52547890c4ff9a989d9 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 2.3E-106 T 15-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VIBNI_A0570 798a0bccf367c52547890c4ff9a989d9 198 PIRSF PIRSF006102 1 198 2.0E-66 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VIBNI_B1207 0a47104f8d63deb0e3a74ce13f13c874 415 Pfam PF07690 Major Facilitator Superfamily 13 336 9.2E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1207 0a47104f8d63deb0e3a74ce13f13c874 415 Gene3D G3DSA:1.20.1250.20 3 405 1.5E-34 T 15-10-2018 VIBNI_B1207 0a47104f8d63deb0e3a74ce13f13c874 415 SUPERFAMILY SSF103473 10 409 1.57E-38 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A2904 f468bba6f1f635ca33a9b94ce7cdd68e 266 Pfam PF08239 Bacterial SH3 domain 137 189 9.7E-13 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A2904 f468bba6f1f635ca33a9b94ce7cdd68e 266 Gene3D G3DSA:2.30.30.40 129 192 8.9E-13 T 15-10-2018 VIBNI_A2904 f468bba6f1f635ca33a9b94ce7cdd68e 266 SMART SM00287 127 192 3.3E-6 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A2950 4afba060c4e58993c25caf86d8dade5e 95 Gene3D G3DSA:3.30.160.100 1 95 4.8E-39 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like VIBNI_A2950 4afba060c4e58993c25caf86d8dade5e 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.1E-28 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VIBNI_A2950 4afba060c4e58993c25caf86d8dade5e 95 SUPERFAMILY SSF69754 1 95 6.8E-35 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like VIBNI_A2950 4afba060c4e58993c25caf86d8dade5e 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.5E-33 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VIBNI_B0840 5b627a5d96cbf22cad09d1d0fe509b1e 378 Pfam PF10442 FIST C domain 219 356 5.0E-30 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_B0840 5b627a5d96cbf22cad09d1d0fe509b1e 378 SMART SM00897 25 218 9.3E-42 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_B0840 5b627a5d96cbf22cad09d1d0fe509b1e 378 Pfam PF08495 FIST N domain 28 217 2.4E-33 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_B0840 5b627a5d96cbf22cad09d1d0fe509b1e 378 SMART SM01204 219 357 5.2E-41 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A0960 a6cc9adb008046fc0a6f8104079cbe08 479 Pfam PF00171 Aldehyde dehydrogenase family 19 474 1.4E-156 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A0960 a6cc9adb008046fc0a6f8104079cbe08 479 Gene3D G3DSA:3.40.605.10 23 468 7.9E-170 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A0960 a6cc9adb008046fc0a6f8104079cbe08 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A0960 a6cc9adb008046fc0a6f8104079cbe08 479 SUPERFAMILY SSF53720 6 476 6.02E-151 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A0960 a6cc9adb008046fc0a6f8104079cbe08 479 Gene3D G3DSA:3.40.309.10 251 443 7.9E-170 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.877 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 15-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 Gene3D G3DSA:1.10.520.20 2 106 4.7E-37 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 SUPERFAMILY SSF47928 3 105 2.22E-28 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.9E-27 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 2.9E-27 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 2.9E-27 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.9E-27 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.9E-27 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 4.1E-63 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A3864 2ec1aa6fdd9026dd8b3d6908437c2ed9 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.9E-53 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VIBNI_A0101 dfffb0e47e559c5eb96dca6d4200bfcb 157 Pfam PF04073 Aminoacyl-tRNA editing domain 28 146 5.2E-28 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0101 dfffb0e47e559c5eb96dca6d4200bfcb 157 SUPERFAMILY SSF55826 6 155 7.98E-35 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0101 dfffb0e47e559c5eb96dca6d4200bfcb 157 Gene3D G3DSA:3.90.960.10 6 156 1.8E-37 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VIBNI_A0499 2b4d9d9b14b4fb18839e298341b1c330 780 SUPERFAMILY SSF141371 141 199 4.9E-5 T 15-10-2018 VIBNI_A0499 2b4d9d9b14b4fb18839e298341b1c330 780 Pfam PF07238 PilZ domain 144 222 2.9E-6 T 15-10-2018 IPR009875 PilZ domain GO:0035438 VIBNI_A2366 c4371812b5f45a2c3ba8da840629347d 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 2.5E-19 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VIBNI_B1599 b84db3235d771548204365344ea0086b 407 Gene3D G3DSA:3.30.160.720 283 344 5.2E-23 T 15-10-2018 VIBNI_B1599 b84db3235d771548204365344ea0086b 407 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 2.3E-74 T 15-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VIBNI_B1599 b84db3235d771548204365344ea0086b 407 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 377 7.8E-27 T 15-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VIBNI_B1599 b84db3235d771548204365344ea0086b 407 Pfam PF00149 Calcineurin-like phosphoesterase 1 98 1.6E-13 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_B1599 b84db3235d771548204365344ea0086b 407 SUPERFAMILY SSF56300 1 341 2.58E-60 T 15-10-2018 VIBNI_B1599 b84db3235d771548204365344ea0086b 407 Gene3D G3DSA:3.60.21.10 1 281 2.2E-86 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A1748 e23089e59c0547caae17df45161ba9a1 399 Pfam PF10442 FIST C domain 228 375 1.4E-16 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A1748 e23089e59c0547caae17df45161ba9a1 399 Pfam PF08495 FIST N domain 32 226 1.4E-25 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_A1748 e23089e59c0547caae17df45161ba9a1 399 SMART SM01204 228 376 3.0E-23 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VIBNI_A1748 e23089e59c0547caae17df45161ba9a1 399 SMART SM00897 29 227 5.2E-33 T 15-10-2018 IPR013702 FIST domain, N-terminal VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 SUPERFAMILY SSF53187 140 457 1.46E-63 T 15-10-2018 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 SMART SM00631 147 436 4.4E-45 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 Gene3D G3DSA:2.60.40.10 470 587 8.7E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 ProSitePatterns PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature. 358 368 - T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 355 368 3.6E-5 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 285 293 3.6E-5 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 203 217 3.6E-5 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 Pfam PF00246 Zinc carboxypeptidase 156 429 3.0E-47 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1567 ef826bcd17a98fbeaec1d1d7407cb3c8 738 Gene3D G3DSA:3.40.630.10 144 465 3.7E-73 T 15-10-2018 VIBNI_A0977 ef3bbe484e77c33f9b43492d78ed2711 390 SUPERFAMILY SSF53697 20 374 7.68E-51 T 15-10-2018 VIBNI_A0977 ef3bbe484e77c33f9b43492d78ed2711 390 Pfam PF01380 SIS domain 55 190 1.9E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A0977 ef3bbe484e77c33f9b43492d78ed2711 390 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 383 1.2E-174 T 15-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 VIBNI_A0977 ef3bbe484e77c33f9b43492d78ed2711 390 Gene3D G3DSA:3.40.50.10490 4 203 5.8E-56 T 15-10-2018 VIBNI_A0977 ef3bbe484e77c33f9b43492d78ed2711 390 Gene3D G3DSA:3.40.50.10490 204 377 1.1E-57 T 15-10-2018 VIBNI_A3281 58fa98f3f11c07c944045d5adf1c4c73 405 Gene3D G3DSA:3.40.190.10 114 262 2.2E-19 T 15-10-2018 VIBNI_A3281 58fa98f3f11c07c944045d5adf1c4c73 405 SUPERFAMILY SSF53850 32 278 2.23E-35 T 15-10-2018 VIBNI_A3281 58fa98f3f11c07c944045d5adf1c4c73 405 Gene3D G3DSA:3.40.190.10 2 113 7.4E-12 T 15-10-2018 VIBNI_A3281 58fa98f3f11c07c944045d5adf1c4c73 405 Pfam PF13343 Bacterial extracellular solute-binding protein 105 265 3.3E-16 T 15-10-2018 VIBNI_B1551 7a1bb2e1e6d63ea5a526b3c7a9d98fee 196 SUPERFAMILY SSF46689 3 70 3.98E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1551 7a1bb2e1e6d63ea5a526b3c7a9d98fee 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 1.2E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1551 7a1bb2e1e6d63ea5a526b3c7a9d98fee 196 SUPERFAMILY SSF48498 80 190 2.77E-12 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VIBNI_B1551 7a1bb2e1e6d63ea5a526b3c7a9d98fee 196 Gene3D G3DSA:1.10.10.60 1 47 6.2E-18 T 15-10-2018 VIBNI_B1551 7a1bb2e1e6d63ea5a526b3c7a9d98fee 196 Gene3D G3DSA:1.10.357.10 49 190 5.3E-14 T 15-10-2018 VIBNI_B2144 4a69fcdc4d869fd477fe57a7fd72a29d 239 SUPERFAMILY SSF53335 4 152 1.53E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B2144 4a69fcdc4d869fd477fe57a7fd72a29d 239 Pfam PF08241 Methyltransferase domain 44 139 2.6E-20 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VIBNI_B2144 4a69fcdc4d869fd477fe57a7fd72a29d 239 Gene3D G3DSA:3.40.50.150 24 236 3.9E-42 T 15-10-2018 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 PRINTS PR01399 Enterobactin synthetase component D signature 78 96 1.9E-18 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 1.9E-18 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 1.9E-18 T 15-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 SUPERFAMILY SSF56214 112 207 1.92E-10 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 202 1.1E-8 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_B0631 e9c707fcdd42864a40e2abc8c3a4c605 234 Gene3D G3DSA:3.90.470.20 25 132 8.3E-6 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 Gene3D G3DSA:2.40.50.100 239 357 3.1E-18 T 15-10-2018 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 SUPERFAMILY SSF52540 4 243 7.27E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 SUPERFAMILY SSF50331 236 360 1.09E-20 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 Gene3D G3DSA:3.40.50.300 1 238 4.3E-74 T 15-10-2018 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 Pfam PF00005 ABC transporter 21 161 4.2E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 Gene3D G3DSA:2.40.50.140 284 345 3.1E-18 T 15-10-2018 VIBNI_B1792 ce6db727c9d11460092bf80db0d74048 362 SMART SM00382 28 211 1.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1456 579b3a6c1226edae39c42b55f2a7e15f 206 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 67 5.0E-28 T 15-10-2018 IPR020137 Uncharacterised protein family HI1736 VIBNI_A1456 579b3a6c1226edae39c42b55f2a7e15f 206 Gene3D G3DSA:3.40.630.30 81 205 2.5E-5 T 15-10-2018 VIBNI_A1456 579b3a6c1226edae39c42b55f2a7e15f 206 SUPERFAMILY SSF55729 99 196 1.08E-6 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1241 f59512275a4f78cec09f49335570d73e 411 Pfam PF07690 Major Facilitator Superfamily 15 294 2.8E-31 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1241 f59512275a4f78cec09f49335570d73e 411 SUPERFAMILY SSF103473 9 399 1.57E-58 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1241 f59512275a4f78cec09f49335570d73e 411 Gene3D G3DSA:1.20.1250.20 3 402 1.7E-57 T 15-10-2018 VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 SUPERFAMILY SSF141868 412 635 1.18E-38 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Gene3D G3DSA:3.30.70.270 221 390 6.7E-18 T 15-10-2018 VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 SUPERFAMILY SSF55073 243 386 4.87E-14 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 7.1E-37 T 15-10-2018 IPR032244 LapD/MoxY, periplasmic domain VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 SMART SM00267 226 403 1.0E-6 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 384 1.2E-11 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Gene3D G3DSA:3.30.1040.50 102 151 6.2E-15 T 15-10-2018 VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Gene3D G3DSA:3.20.20.450 402 636 7.0E-38 T 15-10-2018 IPR035919 EAL domain superfamily VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 Pfam PF00563 EAL domain 412 634 4.8E-39 T 15-10-2018 IPR001633 EAL domain VIBNI_B0025 602f3067ad90b9c87905f82da1c4efb1 636 SMART SM00052 403 635 2.0E-9 T 15-10-2018 IPR001633 EAL domain VIBNI_B1717 31b00956a66376cec10da6802be5feed 266 SUPERFAMILY SSF161098 7 265 2.22E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1717 31b00956a66376cec10da6802be5feed 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 255 5.4E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1717 31b00956a66376cec10da6802be5feed 266 Gene3D G3DSA:1.10.3720.10 4 259 1.0E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.493 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.1E-156 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A0226 a1d70aca1ed557596bc7265c799b7f96 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.8E-36 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 SUPERFAMILY SSF51338 6 383 1.61E-12 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 SUPERFAMILY SSF51556 57 353 2.35E-101 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 Gene3D G3DSA:3.20.20.140 57 353 4.0E-128 T 15-10-2018 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 8 379 3.5E-96 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 PIRSF PIRSF038994 4 386 1.0E-125 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 Pfam PF01979 Amidohydrolase family 53 382 2.5E-25 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A0972 e865623fcfd30f6df4153f8096350e91 396 Gene3D G3DSA:2.30.40.10 12 380 4.0E-128 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 SUPERFAMILY SSF52540 3 269 3.59E-121 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 4.3E-63 T 15-10-2018 IPR017926 Glutamine amidotransferase VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.5E-124 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.509 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 SUPERFAMILY SSF52317 289 541 2.37E-88 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.3E-260 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 Gene3D G3DSA:3.40.50.880 286 544 5.5E-106 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_A0128 9d3c316a3ba9c33a0182639fa1953288 546 Gene3D G3DSA:3.40.50.300 1 285 9.5E-133 T 15-10-2018 VIBNI_A0063 ab403d8677e23856a8ce8d8f764f1bdb 233 Pfam PF04231 Endonuclease I 34 228 3.1E-45 T 15-10-2018 IPR007346 Endonuclease I GO:0004518 VIBNI_A0063 ab403d8677e23856a8ce8d8f764f1bdb 233 SUPERFAMILY SSF54060 21 229 1.04E-94 T 15-10-2018 VIBNI_A2350 aa2b74a251db409dea454ade53fc4cf4 344 Pfam PF01032 FecCD transport family 17 337 4.7E-89 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A2350 aa2b74a251db409dea454ade53fc4cf4 344 Gene3D G3DSA:1.10.3470.10 4 343 3.7E-102 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A2350 aa2b74a251db409dea454ade53fc4cf4 344 SUPERFAMILY SSF81345 7 338 4.32E-81 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0150 a7f43c01e82e3b0b28f4d68f8c6f5c4f 96 Gene3D G3DSA:3.30.70.100 1 93 1.7E-22 T 15-10-2018 VIBNI_B0150 a7f43c01e82e3b0b28f4d68f8c6f5c4f 96 SUPERFAMILY SSF54909 3 93 6.19E-10 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A0607 b3ff2081264b973891e7e0bfdc1da849 363 SUPERFAMILY SSF55729 184 341 3.28E-8 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0607 b3ff2081264b973891e7e0bfdc1da849 363 Pfam PF13480 Acetyltransferase (GNAT) domain 186 316 2.3E-5 T 15-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VIBNI_B1022 3aa91f2c357003c964027913d3094361 295 Gene3D G3DSA:3.60.15.10 30 266 1.5E-25 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1022 3aa91f2c357003c964027913d3094361 295 SUPERFAMILY SSF56281 31 254 4.9E-32 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1022 3aa91f2c357003c964027913d3094361 295 Pfam PF00753 Metallo-beta-lactamase superfamily 45 230 3.9E-10 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_B1022 3aa91f2c357003c964027913d3094361 295 SMART SM00849 45 230 2.1E-15 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0797 5b92684ac9ebeee1127a90cc7962ec8c 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 265 3.8E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0797 5b92684ac9ebeee1127a90cc7962ec8c 270 SUPERFAMILY SSF161098 3 270 2.99E-68 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0797 5b92684ac9ebeee1127a90cc7962ec8c 270 Gene3D G3DSA:1.10.3720.10 1 262 2.6E-56 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0519 d6be1c5086f3dc43a184afc230074bfc 457 Gene3D G3DSA:3.30.1330.120 261 398 3.0E-91 T 15-10-2018 VIBNI_B0519 d6be1c5086f3dc43a184afc230074bfc 457 Gene3D G3DSA:1.10.4100.10 16 431 3.0E-91 T 15-10-2018 VIBNI_B0519 d6be1c5086f3dc43a184afc230074bfc 457 SUPERFAMILY SSF103378 3 449 1.31E-104 T 15-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 VIBNI_B0519 d6be1c5086f3dc43a184afc230074bfc 457 Pfam PF03972 MmgE/PrpD family 5 438 1.3E-122 T 15-10-2018 IPR005656 MmgE/PrpD GO:0016829 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 Gene3D G3DSA:3.40.50.720 135 269 4.2E-78 T 15-10-2018 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 Pfam PF13602 Zinc-binding dehydrogenase 195 318 2.9E-13 T 15-10-2018 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 96 9.6E-6 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 SMART SM00829 10 318 2.9E-12 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 Gene3D G3DSA:3.90.180.10 18 318 4.2E-78 T 15-10-2018 VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 SUPERFAMILY SSF50129 1 157 1.73E-29 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0714 5274e3428c9cfb50cf302f02be927905 320 SUPERFAMILY SSF51735 125 295 2.47E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3193 53076da1156eabddff3ce468a3c089f2 313 Pfam PF01112 Asparaginase 7 308 4.1E-109 T 15-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VIBNI_A3193 53076da1156eabddff3ce468a3c089f2 313 Gene3D G3DSA:3.60.20.30 178 313 4.5E-47 T 15-10-2018 VIBNI_A3193 53076da1156eabddff3ce468a3c089f2 313 SUPERFAMILY SSF56235 5 309 2.43E-95 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 SUPERFAMILY SSF52402 1 184 3.07E-23 T 15-10-2018 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 PIRSF PIRSF000089 1 317 2.4E-76 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 SMART SM00893 3 183 7.1E-9 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 Gene3D G3DSA:3.40.50.1220 190 317 8.9E-48 T 15-10-2018 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 Pfam PF01012 Electron transfer flavoprotein domain 4 172 8.0E-23 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 SUPERFAMILY SSF52467 194 314 8.66E-40 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 277 7.6E-31 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VIBNI_A1226 d2f43dd70168c24110444f1c51bb2400 318 Gene3D G3DSA:3.40.50.620 4 176 1.8E-25 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_B1436 f13df96cb4f2ca9359ff1430da205caa 171 SUPERFAMILY SSF158694 12 171 3.01E-48 T 15-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VIBNI_B1436 f13df96cb4f2ca9359ff1430da205caa 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 171 2.2E-67 T 15-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VIBNI_B1436 f13df96cb4f2ca9359ff1430da205caa 171 Gene3D G3DSA:1.10.3330.10 11 171 1.7E-59 T 15-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VIBNI_B1436 f13df96cb4f2ca9359ff1430da205caa 171 Pfam PF09349 OHCU decarboxylase 11 169 4.3E-43 T 15-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 SUPERFAMILY SSF55545 4 105 9.42E-6 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 106 268 6.5E-10 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 Gene3D G3DSA:3.20.20.80 105 417 6.7E-63 T 15-10-2018 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 SUPERFAMILY SSF51445 106 421 4.74E-52 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 PRINTS PR00738 Glycosyl hydrolase family 20 signature 67 87 4.1E-11 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 PRINTS PR00738 Glycosyl hydrolase family 20 signature 100 117 4.1E-11 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 PRINTS PR00738 Glycosyl hydrolase family 20 signature 226 244 4.1E-11 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A0301 a881a1c1cf82d83271a77a48257553ae 589 PRINTS PR00738 Glycosyl hydrolase family 20 signature 175 192 4.1E-11 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 8.2E-41 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 Gene3D G3DSA:3.90.79.10 1 132 2.0E-40 T 15-10-2018 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.1E-9 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.1E-9 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 Pfam PF00293 NUDIX domain 5 125 2.2E-21 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A0169 fecc8f1cc3d36bbb7b26b6fbb92aa4e5 133 SUPERFAMILY SSF55811 3 128 3.25E-36 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A1659 094cb19cb601d9983aa20360cb09d9aa 67 PIRSF PIRSF037225 1 65 2.0E-24 T 15-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VIBNI_A1659 094cb19cb601d9983aa20360cb09d9aa 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 1.2E-19 T 15-10-2018 IPR025990 Cysteine-rich CPXCG protein VIBNI_A0159 18b78e70caa9415a7ddf76463c8dcf59 201 Gene3D G3DSA:1.10.530.10 37 195 3.7E-14 T 15-10-2018 VIBNI_A0159 18b78e70caa9415a7ddf76463c8dcf59 201 SUPERFAMILY SSF53955 6 162 2.93E-22 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_B1954 ff62f0ce81323d74f77f6dec3a6660f9 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 11 206 4.5E-25 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VIBNI_B1954 ff62f0ce81323d74f77f6dec3a6660f9 219 SUPERFAMILY SSF56529 9 214 3.53E-38 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B1954 ff62f0ce81323d74f77f6dec3a6660f9 219 Gene3D G3DSA:3.90.850.10 8 217 1.5E-37 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VIBNI_B0070 48580adf6988724b18baeecd92b03cc3 404 Gene3D G3DSA:1.20.1250.20 5 396 1.2E-28 T 15-10-2018 VIBNI_B0070 48580adf6988724b18baeecd92b03cc3 404 SUPERFAMILY SSF103473 7 391 3.27E-34 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0070 48580adf6988724b18baeecd92b03cc3 404 Pfam PF05977 Transmembrane secretion effector 56 390 2.4E-13 T 15-10-2018 IPR010290 Transmembrane secretion effector VIBNI_B1979 338fa20eec91b45cd379b6c4255ef060 120 Gene3D G3DSA:2.60.120.10 19 118 3.3E-22 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1979 338fa20eec91b45cd379b6c4255ef060 120 SUPERFAMILY SSF51182 26 116 7.13E-15 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1979 338fa20eec91b45cd379b6c4255ef060 120 Pfam PF05899 Protein of unknown function (DUF861) 42 115 5.4E-18 T 15-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 VIBNI_B1247 b91b6431de25956ed4de09c264b1384b 194 SUPERFAMILY SSF101874 25 193 3.66E-20 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VIBNI_B1247 b91b6431de25956ed4de09c264b1384b 194 Gene3D G3DSA:2.40.128.110 23 194 2.9E-39 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VIBNI_B1247 b91b6431de25956ed4de09c264b1384b 194 Pfam PF04264 YceI-like domain 26 189 1.5E-13 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VIBNI_B1247 b91b6431de25956ed4de09c264b1384b 194 SMART SM00867 25 192 1.5E-5 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 SMART SM00965 56 107 2.8E-5 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Gene3D G3DSA:2.170.130.10 134 262 7.0E-32 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Pfam PF00593 TonB dependent receptor 765 1033 1.8E-30 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 235 1.0E-9 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Gene3D G3DSA:2.40.170.20 725 1037 6.5E-48 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Gene3D G3DSA:2.40.170.20 317 630 5.2E-38 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 SUPERFAMILY SSF56935 134 1037 3.26E-63 T 15-10-2018 VIBNI_A3882 fc100281f1821c7f9db12d07c8e34c33 1037 Gene3D G3DSA:3.55.50.30 34 106 7.0E-17 T 15-10-2018 VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 Gene3D G3DSA:3.30.70.270 344 507 3.3E-53 T 15-10-2018 VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 SUPERFAMILY SSF55073 355 506 2.51E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 504 1.2E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 506 1.6E-46 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 SMART SM00267 339 508 9.9E-50 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1762 827b6c0486e2a9e0fae83569151a9247 508 Gene3D G3DSA:3.30.450.20 26 240 1.6E-6 T 15-10-2018 VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 SUPERFAMILY SSF53850 119 288 5.97E-18 T 15-10-2018 VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.8E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 Gene3D G3DSA:3.40.190.290 96 277 3.5E-8 T 15-10-2018 VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 Pfam PF03466 LysR substrate binding domain 123 290 5.5E-15 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 Gene3D G3DSA:1.10.10.10 5 91 2.1E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1129 34d4ca1c224f92426311f0cfe17f9ca0 310 SUPERFAMILY SSF46785 5 85 1.48E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 40 450 4.8E-101 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 SUPERFAMILY SSF56601 39 455 2.89E-82 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 405 418 9.1E-28 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 326 340 9.1E-28 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 341 355 9.1E-28 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 267 289 9.1E-28 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 51 70 9.1E-28 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 Gene3D G3DSA:3.50.80.20 76 167 1.0E-10 T 15-10-2018 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 Gene3D G3DSA:3.40.710.10 234 459 7.7E-52 T 15-10-2018 VIBNI_A2809 0909f571327b5f241a39a962652816ea 464 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 43 427 1.4E-103 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.8E-40 T 15-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 Gene3D G3DSA:3.40.30.10 171 241 1.6E-22 T 15-10-2018 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 Pfam PF00462 Glutaredoxin 173 231 3.2E-18 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 Gene3D G3DSA:3.40.30.10 4 166 4.5E-62 T 15-10-2018 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 SUPERFAMILY SSF52833 1 240 1.75E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 Pfam PF08534 Redoxin 5 160 3.6E-31 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 PRINTS PR00160 Glutaredoxin signature 228 241 4.8E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 PRINTS PR00160 Glutaredoxin signature 173 191 4.8E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_A3588 e79d2aac8f1aa252cb921a739468fc37 243 PRINTS PR00160 Glutaredoxin signature 214 227 4.8E-14 T 15-10-2018 IPR014025 Glutaredoxin subgroup VIBNI_B0219 d71eab880c354ad2b6686143bf042e0b 322 Gene3D G3DSA:3.40.190.170 23 321 2.9E-76 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B0219 d71eab880c354ad2b6686143bf042e0b 322 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 304 5.4E-57 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 4.6E-35 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 SUPERFAMILY SSF53613 7 259 3.12E-60 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.74 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 Pfam PF02110 Hydroxyethylthiazole kinase family 10 250 2.4E-74 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 PIRSF PIRSF000513 4 261 4.0E-96 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 251 5.3E-79 T 15-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1376 1b12340355b2fe3769ca272f90af4450 261 Gene3D G3DSA:3.40.1190.20 1 261 6.3E-94 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0199 8e48dc469d72a06016a17282b86f810e 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 38.523 T 15-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VIBNI_A0199 8e48dc469d72a06016a17282b86f810e 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 5.0E-16 T 15-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VIBNI_A0199 8e48dc469d72a06016a17282b86f810e 275 SUPERFAMILY SSF56300 15 270 6.14E-59 T 15-10-2018 VIBNI_A0199 8e48dc469d72a06016a17282b86f810e 275 Gene3D G3DSA:3.60.21.10 3 258 2.4E-69 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A0199 8e48dc469d72a06016a17282b86f810e 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 1.4E-17 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A1396 9060200153b8747dbb366641eae43fd6 128 Gene3D G3DSA:3.10.129.10 1 128 2.7E-40 T 15-10-2018 VIBNI_A1396 9060200153b8747dbb366641eae43fd6 128 SUPERFAMILY SSF54637 4 125 4.03E-39 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_A1396 9060200153b8747dbb366641eae43fd6 128 Pfam PF03061 Thioesterase superfamily 22 94 3.9E-20 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VIBNI_A1243 736504123ec818ffebb9ae1d17039022 439 Gene3D G3DSA:3.40.190.10 143 425 2.6E-68 T 15-10-2018 VIBNI_A1243 736504123ec818ffebb9ae1d17039022 439 Pfam PF01547 Bacterial extracellular solute-binding protein 130 342 4.6E-20 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1243 736504123ec818ffebb9ae1d17039022 439 SUPERFAMILY SSF53850 28 429 8.61E-62 T 15-10-2018 VIBNI_A1243 736504123ec818ffebb9ae1d17039022 439 Gene3D G3DSA:3.40.190.10 48 382 2.6E-68 T 15-10-2018 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 SUPERFAMILY SSF55874 315 469 9.43E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 Gene3D G3DSA:1.10.287.130 188 312 9.9E-11 T 15-10-2018 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 SUPERFAMILY SSF47384 223 281 1.33E-7 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 Gene3D G3DSA:3.30.565.10 313 469 4.5E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 2.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 2.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 2.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 426 2.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 469 5.5E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0261 c92498326d6bca315dc00b2631e61a64 473 SMART SM00387 361 472 1.2E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0763 dfda27079b5fd8941002beff4f54b78b 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 303 6.6E-48 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1935 8e438b2fc36d0346cfe318f46618cc0d 202 Gene3D G3DSA:3.40.50.150 10 202 3.3E-20 T 15-10-2018 VIBNI_B1935 8e438b2fc36d0346cfe318f46618cc0d 202 SUPERFAMILY SSF53335 11 201 3.67E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B1935 8e438b2fc36d0346cfe318f46618cc0d 202 Pfam PF13649 Methyltransferase domain 44 134 3.6E-10 T 15-10-2018 VIBNI_A3715 89e3b1938068fe58a419dd60b10a705e 269 Pfam PF12833 Helix-turn-helix domain 184 258 2.5E-13 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3715 89e3b1938068fe58a419dd60b10a705e 269 SMART SM00342 181 257 3.0E-4 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A3715 89e3b1938068fe58a419dd60b10a705e 269 Gene3D G3DSA:1.10.10.60 162 260 1.5E-14 T 15-10-2018 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 Gene3D G3DSA:2.30.30.790 3 117 7.4E-18 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.0E-52 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.622 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 SUPERFAMILY SSF50104 2 115 4.61E-48 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 Pfam PF01245 Ribosomal protein L19 3 113 4.7E-51 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 PIRSF PIRSF002191 1 117 7.7E-52 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-41 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-41 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A0168 e5ea182a506e2f0a71e0e46cfe282d7c 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-41 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.4E-36 T 15-10-2018 VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Pfam PF00557 Metallopeptidase family M24 309 523 6.9E-45 T 15-10-2018 IPR000994 Peptidase M24 VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 SUPERFAMILY SSF55920 303 559 9.94E-57 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Gene3D G3DSA:3.40.350.10 2 146 5.4E-37 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Gene3D G3DSA:3.90.230.10 300 593 8.8E-96 T 15-10-2018 VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Gene3D G3DSA:3.40.350.10 147 289 9.6E-26 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.5E-23 T 15-10-2018 IPR032416 Peptidase M24, C-terminal domain VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 139 2.3E-19 T 15-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VIBNI_A3812 4f43f05aec06b9efefe083099ff39f60 597 SUPERFAMILY SSF53092 6 135 8.89E-16 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VIBNI_B1611 304c21b0abb6b4a87b6c7e56d36d26d4 370 SUPERFAMILY SSF53756 114 367 2.3E-16 T 15-10-2018 VIBNI_B1611 304c21b0abb6b4a87b6c7e56d36d26d4 370 Gene3D G3DSA:3.40.50.2000 194 346 1.3E-30 T 15-10-2018 VIBNI_B1611 304c21b0abb6b4a87b6c7e56d36d26d4 370 Pfam PF13692 Glycosyl transferases group 1 204 335 3.6E-9 T 15-10-2018 VIBNI_A1939 71b491a6c857b7acead2ebe697bd7305 215 Gene3D G3DSA:2.10.10.20 158 214 6.8E-10 T 15-10-2018 VIBNI_A1939 71b491a6c857b7acead2ebe697bd7305 215 SUPERFAMILY SSF51055 165 212 4.58E-10 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A1939 71b491a6c857b7acead2ebe697bd7305 215 SMART SM00495 169 213 1.3E-6 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_B0620 925631419f79a7aa889cac7dfd414dc1 356 SUPERFAMILY SSF51569 12 345 2.2E-113 T 15-10-2018 VIBNI_B0620 925631419f79a7aa889cac7dfd414dc1 356 Pfam PF00793 DAHP synthetase I family 44 336 7.8E-87 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_B0620 925631419f79a7aa889cac7dfd414dc1 356 Gene3D G3DSA:3.20.20.70 8 350 9.4E-134 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0620 925631419f79a7aa889cac7dfd414dc1 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 21 345 4.0E-134 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_B0620 925631419f79a7aa889cac7dfd414dc1 356 PIRSF PIRSF001361 1 351 5.8E-144 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VIBNI_B1283 03a1c65c7d165f1ae56978f0ba350ee2 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 50.881 T 15-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VIBNI_B1283 03a1c65c7d165f1ae56978f0ba350ee2 251 SUPERFAMILY SSF89550 4 244 1.18E-59 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VIBNI_B1283 03a1c65c7d165f1ae56978f0ba350ee2 251 Gene3D G3DSA:3.20.20.140 4 247 1.5E-61 T 15-10-2018 VIBNI_B1283 03a1c65c7d165f1ae56978f0ba350ee2 251 SMART SM00481 5 79 2.2E-7 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VIBNI_A1329 7681b179fa02c595d8d514b234c1da0e 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.2E-73 T 15-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VIBNI_A1329 7681b179fa02c595d8d514b234c1da0e 394 Gene3D G3DSA:1.10.3820.10 15 193 4.3E-38 T 15-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VIBNI_A1329 7681b179fa02c595d8d514b234c1da0e 394 PIRSF PIRSF000014 1 394 5.0E-164 T 15-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VIBNI_A1329 7681b179fa02c595d8d514b234c1da0e 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.3E-189 T 15-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VIBNI_A1329 7681b179fa02c595d8d514b234c1da0e 394 SUPERFAMILY SSF48695 12 187 3.51E-60 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily VIBNI_A1313 900e4d282445f956c183d79a53b28758 279 SUPERFAMILY SSF51735 3 273 7.36E-24 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1313 900e4d282445f956c183d79a53b28758 279 Pfam PF13460 NAD(P)H-binding 9 183 4.6E-13 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_A1313 900e4d282445f956c183d79a53b28758 279 Gene3D G3DSA:3.40.50.720 1 279 2.3E-43 T 15-10-2018 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Gene3D G3DSA:3.30.1370.120 189 259 1.0E-21 T 15-10-2018 IPR038591 NolW-like superfamily VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR01032 Gene IV protein signature 542 570 3.0E-12 T 15-10-2018 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR01032 Gene IV protein signature 595 617 3.0E-12 T 15-10-2018 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR01032 Gene IV protein signature 474 497 3.0E-12 T 15-10-2018 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 602 616 1.2E-36 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.2E-36 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 579 597 1.2E-36 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 473 1.2E-36 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 346 356 1.2E-36 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 560 593 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 623 1.6E-160 T 15-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 1.4E-15 T 15-10-2018 IPR005644 NolW-like VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 1.6E-8 T 15-10-2018 IPR005644 NolW-like VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Pfam PF03958 Bacterial type II/III secretion system short domain 267 346 4.5E-21 T 15-10-2018 IPR005644 NolW-like VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Pfam PF00263 Bacterial type II and III secretion system protein 453 615 1.7E-50 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Gene3D G3DSA:3.30.1370.120 264 344 7.0E-19 T 15-10-2018 IPR038591 NolW-like superfamily VIBNI_A3379 5fad443da8c825d48ce8c7f8aea3181d 677 Gene3D G3DSA:3.30.1370.120 22 186 5.4E-52 T 15-10-2018 IPR038591 NolW-like superfamily VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 Gene3D G3DSA:1.20.1640.10 106 299 7.0E-13 T 15-10-2018 VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.3E-11 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 1.6E-56 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 Pfam PF02355 Protein export membrane protein 112 292 2.4E-71 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 9.3E-88 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 2.2E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 2.2E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 2.2E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 2.2E-33 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 SUPERFAMILY SSF82866 74 293 5.23E-42 T 15-10-2018 VIBNI_A0428 01df15aea9f2e8dbc89b0f1617494dda 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.485 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VIBNI_A1388 7478566d1dda01a3a3ec02622826c25b 215 Pfam PF00005 ABC transporter 20 163 2.8E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1388 7478566d1dda01a3a3ec02622826c25b 215 Gene3D G3DSA:3.40.50.300 1 204 8.6E-52 T 15-10-2018 VIBNI_A1388 7478566d1dda01a3a3ec02622826c25b 215 SUPERFAMILY SSF52540 6 200 1.44E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1388 7478566d1dda01a3a3ec02622826c25b 215 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1388 7478566d1dda01a3a3ec02622826c25b 215 SMART SM00382 28 214 1.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1090 712f3f857af8189c4df012155a686190 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 2.0E-35 T 15-10-2018 IPR021811 Protein of unknown function DUF3389 VIBNI_B0153 83662bf6f9995ce43391b361d45177f3 131 SUPERFAMILY SSF55298 4 130 2.51E-23 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0153 83662bf6f9995ce43391b361d45177f3 131 Pfam PF01042 Endoribonuclease L-PSP 17 130 5.4E-16 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_B0153 83662bf6f9995ce43391b361d45177f3 131 Gene3D G3DSA:3.30.1330.40 6 131 4.3E-24 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B1427 3b306757bbbfe371b6fee31086672a93 140 SUPERFAMILY SSF51206 8 124 9.56E-15 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_B1427 3b306757bbbfe371b6fee31086672a93 140 Gene3D G3DSA:2.60.120.10 4 137 4.2E-15 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1427 3b306757bbbfe371b6fee31086672a93 140 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 1.1E-9 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain VIBNI_A0365 3eee5957aca0689213514c9f6b797960 494 Pfam PF02554 Carbon starvation protein CstA 4 144 6.7E-33 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VIBNI_A0365 3eee5957aca0689213514c9f6b797960 494 Pfam PF02554 Carbon starvation protein CstA 156 292 1.3E-18 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VIBNI_A0365 3eee5957aca0689213514c9f6b797960 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 2.6E-21 T 15-10-2018 IPR025299 CstA, C-terminal domain VIBNI_B1718 fe8d8ade4b6672dd0fe6cc4aa0e86833 90 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 3 90 4.8E-40 T 15-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane VIBNI_B1161 34d780fda8401808f609faddb69476e4 234 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 3.8E-71 T 15-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VIBNI_B1161 34d780fda8401808f609faddb69476e4 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 214 3.5E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1161 34d780fda8401808f609faddb69476e4 234 SUPERFAMILY SSF161098 7 215 3.01E-50 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1161 34d780fda8401808f609faddb69476e4 234 Gene3D G3DSA:1.10.3720.10 3 225 8.3E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1204 c30f42720d62bcb395d8e56079a7f15a 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 426 7.0E-126 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1204 c30f42720d62bcb395d8e56079a7f15a 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 420 7.4E-113 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A1204 c30f42720d62bcb395d8e56079a7f15a 429 PIRSF PIRSF006066 6 429 8.0E-149 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 Gene3D G3DSA:1.10.287.470 96 219 5.7E-34 T 15-10-2018 VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 Gene3D G3DSA:2.40.30.170 257 303 5.7E-34 T 15-10-2018 VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 SUPERFAMILY SSF111369 117 266 5.1E-6 T 15-10-2018 VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 Gene3D G3DSA:2.40.50.100 62 255 5.7E-34 T 15-10-2018 VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 299 8.4E-10 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VIBNI_B1761 c27d824cab3202805b2ecead069a6cb3 376 SUPERFAMILY SSF111369 61 121 9.42E-8 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 Gene3D G3DSA:3.50.50.60 5 330 4.2E-98 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 382 4.9E-116 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 SUPERFAMILY SSF51905 3 376 2.32E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 Gene3D G3DSA:3.30.9.50 80 267 4.2E-98 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.2E-18 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.2E-18 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.2E-18 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-18 T 15-10-2018 VIBNI_A2691 2ebc9ffc1cd70147b71fe8d15b98f0f5 383 Pfam PF01494 FAD binding domain 5 331 5.3E-27 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 VIBNI_A1691 ceb5b615466470ea8a305648cd02d5d9 122 Pfam PF05656 Protein of unknown function (DUF805) 11 111 1.3E-32 T 15-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 Pfam PF07702 UTRA domain 136 272 2.0E-31 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 Pfam PF00392 Bacterial regulatory proteins, gntR family 54 114 4.8E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 SUPERFAMILY SSF64288 102 279 1.46E-37 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 88 104 2.2E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 74 88 2.2E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 SUPERFAMILY SSF46785 43 121 5.45E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 SMART SM00866 136 276 4.6E-30 T 15-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 Gene3D G3DSA:1.10.10.10 44 122 4.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 SMART SM00345 55 114 9.4E-11 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A2594 062447ef00f4d6dea265724f7f5736dd 286 Gene3D G3DSA:3.40.1410.10 123 283 8.4E-36 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 Gene3D G3DSA:3.40.50.1820 2 231 2.2E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 SUPERFAMILY SSF53474 3 230 4.37E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 Pfam PF12697 Alpha/beta hydrolase family 47 224 7.0E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 175 189 2.6E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 86 2.6E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B0237 b6305127097df9a99a25c2e7650a74cb 231 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 72 2.6E-9 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1896 eaa6418d4fe3f570f5b77f2ed9279394 256 SMART SM00342 172 253 7.6E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1896 eaa6418d4fe3f570f5b77f2ed9279394 256 Gene3D G3DSA:1.10.10.60 152 256 7.4E-23 T 15-10-2018 VIBNI_B1896 eaa6418d4fe3f570f5b77f2ed9279394 256 Pfam PF12833 Helix-turn-helix domain 178 254 1.0E-15 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1896 eaa6418d4fe3f570f5b77f2ed9279394 256 SUPERFAMILY SSF46689 207 254 1.79E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1479 23eb08aad0678adcf00c6a92ae025215 371 SUPERFAMILY SSF53756 117 366 2.04E-17 T 15-10-2018 VIBNI_A1479 23eb08aad0678adcf00c6a92ae025215 371 Gene3D G3DSA:3.40.50.2000 203 346 1.7E-32 T 15-10-2018 VIBNI_A1479 23eb08aad0678adcf00c6a92ae025215 371 Pfam PF13692 Glycosyl transferases group 1 212 318 2.1E-6 T 15-10-2018 VIBNI_A1479 23eb08aad0678adcf00c6a92ae025215 371 Gene3D G3DSA:3.40.50.11010 37 202 4.9E-6 T 15-10-2018 VIBNI_A1471 2bef9ae5e2898395a2b55badc98cc670 245 SMART SM00448 10 126 9.9E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1471 2bef9ae5e2898395a2b55badc98cc670 245 Gene3D G3DSA:3.40.50.2300 1 132 2.7E-30 T 15-10-2018 VIBNI_A1471 2bef9ae5e2898395a2b55badc98cc670 245 Pfam PF00072 Response regulator receiver domain 12 124 1.3E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1471 2bef9ae5e2898395a2b55badc98cc670 245 SUPERFAMILY SSF52172 9 134 1.2E-31 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1197 82146fb68c37397beb5fc673b55bdc08 263 Pfam PF01764 Lipase (class 3) 60 205 5.1E-24 T 15-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VIBNI_B1197 82146fb68c37397beb5fc673b55bdc08 263 Gene3D G3DSA:3.40.50.1820 4 242 3.1E-32 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1197 82146fb68c37397beb5fc673b55bdc08 263 SUPERFAMILY SSF53474 8 232 8.52E-32 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1277 f1cc6469a06d98bf252c10ed625f8fa7 343 Gene3D G3DSA:3.20.20.210 1 343 7.1E-136 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_B1277 f1cc6469a06d98bf252c10ed625f8fa7 343 SUPERFAMILY SSF51726 8 341 1.31E-70 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VIBNI_B1277 f1cc6469a06d98bf252c10ed625f8fa7 343 PIRSF PIRSF005632 1 343 1.8E-197 T 15-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VIBNI_B1277 f1cc6469a06d98bf252c10ed625f8fa7 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 330 4.1E-39 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VIBNI_A3434 406e5c794567e8f973d64c4815d51d96 146 Pfam PF01478 Type IV leader peptidase family 13 98 2.7E-7 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VIBNI_A0640 c0277455e75dcd980b8564b5f2203f36 169 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 45.395 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VIBNI_A0640 c0277455e75dcd980b8564b5f2203f36 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VIBNI_A0640 c0277455e75dcd980b8564b5f2203f36 169 Pfam PF14437 MafB19-like deaminase 6 152 4.3E-34 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VIBNI_A0640 c0277455e75dcd980b8564b5f2203f36 169 Gene3D G3DSA:3.40.140.10 3 166 9.5E-64 T 15-10-2018 VIBNI_A0640 c0277455e75dcd980b8564b5f2203f36 169 SUPERFAMILY SSF53927 4 156 1.49E-54 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 3.0E-43 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 Gene3D G3DSA:3.30.230.10 1 118 8.0E-42 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 SUPERFAMILY SSF54211 4 114 2.02E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 9.6E-28 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 15-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 Pfam PF00825 Ribonuclease P 6 112 5.4E-33 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VIBNI_A3887 648f14faba3cfecccbc3c422fa69b548 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.466 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 SUPERFAMILY SSF55604 406 479 1.44E-19 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 Gene3D G3DSA:3.30.1360.60 402 482 6.0E-26 T 15-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 382 466 6.3E-18 T 15-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 477 9.5E-180 T 15-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 Pfam PF00367 phosphotransferase system, EIIB 410 441 1.7E-11 T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 Pfam PF02378 Phosphotransferase system, EIIC 11 321 6.2E-72 T 15-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VIBNI_A1455 7e2b12a706564ef9270332f0dab2eea9 490 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 419 436 - T 15-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VIBNI_A0946 766e3f1c92ffe1b74d9e42e452d8f8aa 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 353 1.9E-109 T 15-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VIBNI_A0946 766e3f1c92ffe1b74d9e42e452d8f8aa 370 SUPERFAMILY SSF52096 14 339 1.58E-56 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0946 766e3f1c92ffe1b74d9e42e452d8f8aa 370 Gene3D G3DSA:3.90.226.10 2 363 2.1E-113 T 15-10-2018 VIBNI_B1153 8f40bad656064261b25f8111ee960ebf 482 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 468 43.466 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 VIBNI_B1153 8f40bad656064261b25f8111ee960ebf 482 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 13 450 1.7E-150 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 223 9.7E-47 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 Gene3D G3DSA:3.40.1010.10 11 127 1.8E-44 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 12 245 1.4E-93 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 17 31 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 SUPERFAMILY SSF53790 9 250 5.63E-77 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 92 125 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VIBNI_B2165 c5097b55ebac6a521c9273366251d924 251 Gene3D G3DSA:3.30.950.10 128 251 1.6E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VIBNI_A1302 7015fcc38f4df8f6918d05ca18452424 146 SUPERFAMILY SSF50630 6 140 5.63E-45 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A1302 7015fcc38f4df8f6918d05ca18452424 146 Pfam PF05618 Putative ATP-dependant zinc protease 6 140 1.4E-43 T 15-10-2018 VIBNI_A1302 7015fcc38f4df8f6918d05ca18452424 146 Gene3D G3DSA:2.40.70.10 3 133 6.3E-35 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 Pfam PF00149 Calcineurin-like phosphoesterase 181 397 8.6E-18 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 27 120 9.9E-9 T 15-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 SUPERFAMILY SSF56300 136 433 9.68E-40 T 15-10-2018 VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 Gene3D G3DSA:3.60.21.10 159 484 1.9E-37 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 SUPERFAMILY SSF49363 20 130 3.79E-9 T 15-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VIBNI_A0981 640e0fc0a5c7f0d1605ffb6305f41579 514 Gene3D G3DSA:2.60.40.380 27 132 3.5E-5 T 15-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VIBNI_A0775 7f0e157b208bea8c82649839305abf83 207 Pfam PF03458 UPF0126 domain 92 163 2.3E-21 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 VIBNI_A0775 7f0e157b208bea8c82649839305abf83 207 Pfam PF03458 UPF0126 domain 6 77 5.6E-18 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 PIRSF PIRSF039144 1 112 1.6E-58 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 PRINTS PR00340 P-II protein signature 23 41 4.7E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 PRINTS PR00340 P-II protein signature 2 17 4.7E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 PRINTS PR00340 P-II protein signature 52 75 4.7E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 PRINTS PR00340 P-II protein signature 83 103 4.7E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 SMART SM00938 4 105 1.3E-69 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-48 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 SUPERFAMILY SSF54913 1 112 2.67E-47 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VIBNI_A2484 acd6c630aa04285bfb981178455e5b01 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.8E-45 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VIBNI_A2544 e98a883fb304090ece4b8077226fd028 313 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 313 1.0E-121 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VIBNI_A2544 e98a883fb304090ece4b8077226fd028 313 PIRSF PIRSF026649 9 312 6.4E-89 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VIBNI_A2544 e98a883fb304090ece4b8077226fd028 313 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 50.065 T 15-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VIBNI_A2544 e98a883fb304090ece4b8077226fd028 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 2.6E-81 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VIBNI_A0698 a79bb221a0f5f27b2dbed1ef4cef5cf9 93 Gene3D G3DSA:1.10.10.10 2 93 3.6E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0698 a79bb221a0f5f27b2dbed1ef4cef5cf9 93 PIRSF PIRSF037266 1 93 7.6E-42 T 15-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VIBNI_A0698 a79bb221a0f5f27b2dbed1ef4cef5cf9 93 Pfam PF09904 Winged helix-turn helix 3 91 2.0E-38 T 15-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VIBNI_A3646 46cfb86aec8794d8476df8a3c549ed50 354 SUPERFAMILY SSF51735 1 337 5.47E-93 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3646 46cfb86aec8794d8476df8a3c549ed50 354 Gene3D G3DSA:3.90.25.10 201 333 3.8E-136 T 15-10-2018 VIBNI_A3646 46cfb86aec8794d8476df8a3c549ed50 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.8E-96 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_A3646 46cfb86aec8794d8476df8a3c549ed50 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.7E-155 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VIBNI_A3646 46cfb86aec8794d8476df8a3c549ed50 354 Gene3D G3DSA:3.40.50.720 2 325 3.8E-136 T 15-10-2018 VIBNI_A3118 2900423820c3eb5b1672e1d043c08e9c 378 Pfam PF05987 Bacterial protein of unknown function (DUF898) 8 369 1.2E-92 T 15-10-2018 IPR010295 Protein of unknown function DUF898 VIBNI_B1525 ca23a2403dd18255a2ef4a9f949e871f 167 Gene3D G3DSA:3.40.630.30 1 164 3.0E-36 T 15-10-2018 VIBNI_B1525 ca23a2403dd18255a2ef4a9f949e871f 167 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 4.9E-24 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1525 ca23a2403dd18255a2ef4a9f949e871f 167 SUPERFAMILY SSF55729 1 148 4.79E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 Gene3D G3DSA:3.30.420.40 210 335 1.6E-10 T 15-10-2018 VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 Gene3D G3DSA:3.30.420.40 80 209 5.2E-21 T 15-10-2018 VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 Pfam PF00480 ROK family 92 360 1.9E-19 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 Gene3D G3DSA:1.10.10.10 5 75 9.9E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 SUPERFAMILY SSF53067 85 363 2.99E-26 T 15-10-2018 VIBNI_B1723 56d0c0c6dfe77c1bd7a27250be1459d6 380 SUPERFAMILY SSF46785 8 63 9.26E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 Gene3D G3DSA:3.30.360.10 153 312 9.1E-121 T 15-10-2018 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 15-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 Gene3D G3DSA:3.40.50.720 6 328 9.1E-121 T 15-10-2018 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 SUPERFAMILY SSF51735 3 182 3.91E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.39 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 SMART SM00859 3 146 6.1E-48 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 9.4E-117 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 2.4E-31 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 4.2E-11 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VIBNI_A3594 5908c1e39bfde1a5403c4571b43286bd 334 SUPERFAMILY SSF55347 154 308 7.74E-49 T 15-10-2018 VIBNI_A0362 f20368615fc32f7236891fc4d49334a6 143 Gene3D G3DSA:3.10.50.40 13 140 5.1E-42 T 15-10-2018 VIBNI_A0362 f20368615fc32f7236891fc4d49334a6 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 140 4.9E-13 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A0362 f20368615fc32f7236891fc4d49334a6 143 Gene3D G3DSA:2.40.10.330 72 128 5.1E-42 T 15-10-2018 VIBNI_A0362 f20368615fc32f7236891fc4d49334a6 143 SUPERFAMILY SSF54534 4 142 9.82E-36 T 15-10-2018 VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.6E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.6E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.6E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 Gene3D G3DSA:3.40.50.720 2 245 2.3E-64 T 15-10-2018 VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 2.5E-51 T 15-10-2018 VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.1E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B0654 1a660bbbe6abcaf6bbb98ca41d541153 245 SUPERFAMILY SSF51735 5 245 3.59E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1729 6c357bb4a1e76d7784eddfb089d64b91 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 1.7E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1729 6c357bb4a1e76d7784eddfb089d64b91 285 Gene3D G3DSA:1.10.3720.10 6 277 1.8E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1729 6c357bb4a1e76d7784eddfb089d64b91 285 SUPERFAMILY SSF161098 9 274 6.41E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0352 4c0758477051be8d9a0e2a912cfa339a 333 Gene3D G3DSA:1.25.40.10 31 327 2.1E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0352 4c0758477051be8d9a0e2a912cfa339a 333 SUPERFAMILY SSF81901 139 274 6.93E-7 T 15-10-2018 VIBNI_B0352 4c0758477051be8d9a0e2a912cfa339a 333 SUPERFAMILY SSF81901 44 172 6.15E-12 T 15-10-2018 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 Gene3D G3DSA:3.30.565.10 247 396 8.0E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 396 1.7E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 Gene3D G3DSA:1.10.287.130 139 239 3.2E-15 T 15-10-2018 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 Gene3D G3DSA:3.40.50.2300 1 138 7.3E-41 T 15-10-2018 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 SMART SM00387 286 397 3.0E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 Pfam PF00072 Response regulator receiver domain 8 120 6.4E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 9.8E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 9.8E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 9.8E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 354 9.8E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 SUPERFAMILY SSF55874 237 395 5.76E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 SUPERFAMILY SSF52172 5 147 1.99E-41 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1037 5597f6a630da796ee285c1cf055e3a82 398 SMART SM00448 6 119 3.6E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 SMART SM01374 1 123 5.5E-85 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.5E-54 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.2E-58 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 Gene3D G3DSA:2.40.150.20 1 123 2.0E-55 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.386 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 SUPERFAMILY SSF50193 2 122 7.06E-51 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VIBNI_A3168 3a8744639a16b918579e9819e4d9ab94 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A1141 4c016fc188ef50f1d7eda7fd7a3737b5 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.5E-95 T 15-10-2018 IPR021246 Protein of unknown function DUF2797 VIBNI_A0799 e14f25f070c0e6dc3d07ce8a93cc5257 436 SUPERFAMILY SSF53850 24 422 1.03E-62 T 15-10-2018 VIBNI_A0799 e14f25f070c0e6dc3d07ce8a93cc5257 436 Gene3D G3DSA:3.40.190.10 41 379 4.4E-74 T 15-10-2018 VIBNI_A0799 e14f25f070c0e6dc3d07ce8a93cc5257 436 Pfam PF13416 Bacterial extracellular solute-binding protein 43 345 1.9E-29 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A0799 e14f25f070c0e6dc3d07ce8a93cc5257 436 Gene3D G3DSA:3.40.190.10 141 412 4.4E-74 T 15-10-2018 VIBNI_A2701 20c4588ca7d0775f09f2032a34bad436 396 Pfam PF02515 CoA-transferase family III 5 372 5.5E-107 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 VIBNI_A2701 20c4588ca7d0775f09f2032a34bad436 396 Gene3D G3DSA:3.30.1540.10 232 324 7.4E-114 T 15-10-2018 VIBNI_A2701 20c4588ca7d0775f09f2032a34bad436 396 Gene3D G3DSA:3.40.50.10540 5 387 7.4E-114 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A2701 20c4588ca7d0775f09f2032a34bad436 396 SUPERFAMILY SSF89796 2 395 6.28E-113 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A0403 b299e59c5c69e28d98b0bdbeb1f646ee 461 Pfam PF01136 Peptidase family U32 75 350 8.2E-96 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VIBNI_A0403 b299e59c5c69e28d98b0bdbeb1f646ee 461 Pfam PF16325 Peptidase family U32 C-terminal domain 366 447 9.5E-21 T 15-10-2018 IPR032525 Peptidase family U32, C-terminal VIBNI_A0403 b299e59c5c69e28d98b0bdbeb1f646ee 461 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VIBNI_A0403 b299e59c5c69e28d98b0bdbeb1f646ee 461 Gene3D G3DSA:2.40.30.10 362 448 1.8E-8 T 15-10-2018 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 Gene3D G3DSA:1.10.10.10 3 87 8.2E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 Gene3D G3DSA:3.40.190.10 92 282 5.0E-29 T 15-10-2018 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 2.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 2.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 2.2E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 1.2E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 SUPERFAMILY SSF53850 91 296 1.19E-27 T 15-10-2018 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 Pfam PF03466 LysR substrate binding domain 90 293 5.1E-23 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 Gene3D G3DSA:3.40.190.10 165 267 5.0E-29 T 15-10-2018 VIBNI_B0847 0a73131eadc35aa0bff17295c027ae81 300 SUPERFAMILY SSF46785 4 80 1.14E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3133 3f9436dfdb6b7f0aa840033017636c55 205 Pfam PF01583 Adenylylsulphate kinase 31 184 5.7E-73 T 15-10-2018 VIBNI_A3133 3f9436dfdb6b7f0aa840033017636c55 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 194 6.4E-83 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VIBNI_A3133 3f9436dfdb6b7f0aa840033017636c55 205 Gene3D G3DSA:3.40.50.300 9 205 9.0E-80 T 15-10-2018 VIBNI_A3133 3f9436dfdb6b7f0aa840033017636c55 205 SUPERFAMILY SSF52540 29 201 1.13E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A3133 3f9436dfdb6b7f0aa840033017636c55 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.722 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VIBNI_A1381 431bd1884b6a6410f4d6bce9a76cedc6 283 Gene3D G3DSA:3.40.1190.20 2 282 5.2E-105 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A1381 431bd1884b6a6410f4d6bce9a76cedc6 283 Pfam PF08543 Phosphomethylpyrimidine kinase 25 273 5.9E-95 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VIBNI_A1381 431bd1884b6a6410f4d6bce9a76cedc6 283 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 18 275 7.0E-101 T 15-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VIBNI_A1381 431bd1884b6a6410f4d6bce9a76cedc6 283 SUPERFAMILY SSF53613 14 277 7.64E-85 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A0686 2fcc9ffe9235f94a2a3d708eb6bed6fd 116 Gene3D G3DSA:3.40.30.10 1 116 5.6E-48 T 15-10-2018 VIBNI_A0686 2fcc9ffe9235f94a2a3d708eb6bed6fd 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 9.0E-48 T 15-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VIBNI_A0686 2fcc9ffe9235f94a2a3d708eb6bed6fd 116 Pfam PF03960 ArsC family 6 115 4.0E-19 T 15-10-2018 IPR006660 Arsenate reductase-like VIBNI_A0686 2fcc9ffe9235f94a2a3d708eb6bed6fd 116 SUPERFAMILY SSF52833 2 116 7.11E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 PIRSF PIRSF028788 1 196 4.4E-47 T 15-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 Pfam PF04993 TfoX N-terminal domain 12 102 4.3E-27 T 15-10-2018 IPR007076 TfoX, N-terminal VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 Gene3D G3DSA:3.30.1460.30 1 105 1.2E-35 T 15-10-2018 VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 SUPERFAMILY SSF159894 5 103 7.85E-29 T 15-10-2018 VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 Gene3D G3DSA:1.10.150.20 114 196 2.6E-24 T 15-10-2018 VIBNI_A2114 80abdc4820f113d8e7bf3da7e4b3e413 196 Pfam PF04994 TfoX C-terminal domain 115 194 9.1E-31 T 15-10-2018 IPR007077 TfoX, C-terminal VIBNI_A2696 3a74a57fadea1147570398f3d7bf76c0 276 Gene3D G3DSA:1.10.12.10 206 261 9.8E-16 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VIBNI_A2696 3a74a57fadea1147570398f3d7bf76c0 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 261 1.4E-62 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A2696 3a74a57fadea1147570398f3d7bf76c0 276 Gene3D G3DSA:3.90.226.10 1 204 8.0E-66 T 15-10-2018 VIBNI_A2696 3a74a57fadea1147570398f3d7bf76c0 276 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A2696 3a74a57fadea1147570398f3d7bf76c0 276 SUPERFAMILY SSF52096 5 261 6.79E-82 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 4.2E-66 T 15-10-2018 VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 0.0025 T 15-10-2018 VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 Gene3D G3DSA:3.40.50.720 1 250 3.2E-86 T 15-10-2018 VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 SUPERFAMILY SSF51735 6 250 2.25E-84 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A2586 3f7ee0ae2a36a5d7ba06366cf5aff7fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0214 43d9c5adb855041dec70f749c1c68f3b 193 Pfam PF04972 BON domain 120 185 9.5E-18 T 15-10-2018 IPR007055 BON domain VIBNI_A0214 43d9c5adb855041dec70f749c1c68f3b 193 Pfam PF04972 BON domain 44 111 7.2E-8 T 15-10-2018 IPR007055 BON domain VIBNI_A0214 43d9c5adb855041dec70f749c1c68f3b 193 SMART SM00749 125 187 0.0042 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VIBNI_A3798 0cbb8a113ba2297530fde13808554fd2 103 Pfam PF12305 Protein of unknown function (DUF3630) 6 96 1.5E-38 T 15-10-2018 IPR022080 Protein of unknown function DUF3630 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 Gene3D G3DSA:3.40.309.10 260 448 2.3E-175 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 474 2.4E-206 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 SUPERFAMILY SSF53720 6 478 6.81E-166 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 Gene3D G3DSA:3.40.605.10 19 471 2.3E-175 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B1977 10286ad328733fe6a98dcbcfec946055 481 Pfam PF00171 Aldehyde dehydrogenase family 27 475 5.8E-163 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 5.4E-69 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 Pfam PF00258 Flavodoxin 6 162 1.2E-31 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 Gene3D G3DSA:3.40.50.360 3 177 1.6E-52 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 SUPERFAMILY SSF52218 4 173 1.06E-48 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VIBNI_A2576 2eab7832c8dfec2d3f177d53715748bd 177 PIRSF PIRSF038996 1 174 2.6E-64 T 15-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VIBNI_B1871 68725a10ad936929751488beb6a84135 163 Pfam PF04463 Protein of unknown function (DUF523) 4 148 9.8E-41 T 15-10-2018 IPR007553 Domain of unknown function DUF523 VIBNI_A0989 12013e9d1fca6430b3587723311cad10 94 Gene3D G3DSA:1.10.287.1080 1 94 9.1E-28 T 15-10-2018 VIBNI_A0989 12013e9d1fca6430b3587723311cad10 94 SUPERFAMILY SSF101386 1 93 6.21E-20 T 15-10-2018 VIBNI_A0989 12013e9d1fca6430b3587723311cad10 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 20 80 7.6E-9 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VIBNI_B0427 0d8c8b94e6274d94ebea5fc1854486a2 130 Pfam PF00293 NUDIX domain 6 110 6.8E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_B0427 0d8c8b94e6274d94ebea5fc1854486a2 130 SUPERFAMILY SSF55811 6 109 5.55E-21 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_B0427 0d8c8b94e6274d94ebea5fc1854486a2 130 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_B0427 0d8c8b94e6274d94ebea5fc1854486a2 130 Gene3D G3DSA:3.90.79.10 1 125 4.3E-20 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 SUPERFAMILY SSF111369 62 111 5.1E-5 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 13 434 1.6E-103 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 299 320 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 434 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 379 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 356 1.6E-42 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Gene3D G3DSA:2.40.50.100 272 319 1.4E-17 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Gene3D G3DSA:2.40.30.170 320 407 1.4E-17 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Gene3D G3DSA:2.40.50.100 62 87 3.3E-6 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Pfam PF13437 HlyD family secretion protein 286 393 3.0E-16 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Gene3D G3DSA:1.10.287.470 88 111 3.3E-6 T 15-10-2018 VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Pfam PF13533 Biotin-lipoyl like 63 98 3.9E-6 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VIBNI_B1602 7791cb9c4f797bc1b3084795d9b5803c 435 Gene3D G3DSA:1.10.287.470 233 271 1.4E-17 T 15-10-2018 VIBNI_B1540 412ac4edc43f5b729dfba7623cf38bfe 390 Gene3D G3DSA:1.50.10.10 1 379 1.2E-71 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_B1540 412ac4edc43f5b729dfba7623cf38bfe 390 SUPERFAMILY SSF48208 5 379 8.16E-79 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_B1540 412ac4edc43f5b729dfba7623cf38bfe 390 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 35 365 1.2E-52 T 15-10-2018 VIBNI_A2463 5ebc13f1c1566150288abf73cc1d0f61 414 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 3.6E-114 T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VIBNI_A2463 5ebc13f1c1566150288abf73cc1d0f61 414 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 15-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VIBNI_A2463 5ebc13f1c1566150288abf73cc1d0f61 414 Pfam PF00860 Permease family 3 371 2.6E-95 T 15-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 Pfam PF00202 Aminotransferase class-III 13 435 5.1E-102 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 SUPERFAMILY SSF53383 6 436 5.98E-123 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 PIRSF PIRSF000521 8 392 4.8E-33 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 Gene3D G3DSA:3.90.1150.10 14 435 1.2E-151 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VIBNI_A1032 c261c3bba820d2e48fbd2a078f35d35f 447 Gene3D G3DSA:3.40.640.10 48 326 1.2E-151 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B0329 731a64fb720acd340c553092cadcb24a 159 ProDom PD081734 COMPETENCE J NIN DNA-ENTRY MEMBRANE INHIBITOR NUCLEASE 9 117 4.0E-4 T 15-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ VIBNI_B0329 731a64fb720acd340c553092cadcb24a 159 Pfam PF11033 Competence protein J (ComJ) 8 126 6.5E-18 T 15-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ VIBNI_B0329 731a64fb720acd340c553092cadcb24a 159 Gene3D G3DSA:2.60.34.30 1 132 6.5E-12 T 15-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 2.5E-19 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.6E-86 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 SUPERFAMILY SSF56219 1 268 3.8E-86 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 Gene3D G3DSA:3.60.10.10 1 268 7.8E-78 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.3E-100 T 15-10-2018 VIBNI_A2201 49b75a4f562a045aec0ec51413ddc6da 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VIBNI_A1733 a4c648286b92c93a27a0617f3985e220 216 Pfam PF11205 Protein of unknown function (DUF2987) 20 163 1.7E-48 T 15-10-2018 IPR021370 Protein of unknown function DUF2987 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 37.963 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 3.3E-19 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 3.3E-19 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 3.3E-19 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.3E-19 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 7.1E-91 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 SUPERFAMILY SSF55920 6 255 9.29E-86 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 Gene3D G3DSA:3.90.230.10 2 256 1.4E-99 T 15-10-2018 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 Pfam PF00557 Metallopeptidase family M24 14 243 1.1E-51 T 15-10-2018 IPR000994 Peptidase M24 VIBNI_B0494 bc46be8811119938c265b4f83e9a1daa 256 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 SUPERFAMILY SSF117143 93 223 5.75E-34 T 15-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-12 T 15-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 9.1E-115 T 15-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.3E-39 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 8.6E-30 T 15-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 15-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VIBNI_A2636 8022763248b7bca1fe579f173c369a31 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.4E-23 T 15-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VIBNI_B0632 a5a50fed1e9ab345f936acd10dd4b641 297 Pfam PF01734 Patatin-like phospholipase 13 177 2.7E-11 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_B0632 a5a50fed1e9ab345f936acd10dd4b641 297 SUPERFAMILY SSF52151 9 227 1.23E-29 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_B0632 a5a50fed1e9ab345f936acd10dd4b641 297 Gene3D G3DSA:3.40.1090.10 5 97 2.9E-6 T 15-10-2018 VIBNI_B0632 a5a50fed1e9ab345f936acd10dd4b641 297 Gene3D G3DSA:3.40.1090.10 98 229 6.2E-6 T 15-10-2018 VIBNI_A2520 d369b80ef8148c7efdb4f69d1005af6f 520 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 516 5.0E-37 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2520 d369b80ef8148c7efdb4f69d1005af6f 520 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 1.2E-36 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2520 d369b80ef8148c7efdb4f69d1005af6f 520 SMART SM00267 350 520 1.1E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_A2520 d369b80ef8148c7efdb4f69d1005af6f 520 Gene3D G3DSA:3.30.70.270 352 519 7.0E-44 T 15-10-2018 VIBNI_A2520 d369b80ef8148c7efdb4f69d1005af6f 520 SUPERFAMILY SSF55073 365 519 1.33E-37 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A0819 267dc39811bc33e25af39832a9b0c736 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 1.7E-6 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VIBNI_B0863 5bdbeaaaef70ce355a8d357adf974de8 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 2.1E-24 T 15-10-2018 VIBNI_B0863 5bdbeaaaef70ce355a8d357adf974de8 92 SUPERFAMILY SSF54534 6 89 1.18E-26 T 15-10-2018 VIBNI_B0863 5bdbeaaaef70ce355a8d357adf974de8 92 Gene3D G3DSA:3.10.50.40 2 92 3.6E-33 T 15-10-2018 VIBNI_B1063 4ee5094198fb41ea80cb4438a9126b39 228 Pfam PF01575 MaoC like domain 87 199 1.7E-22 T 15-10-2018 IPR002539 MaoC-like dehydratase domain VIBNI_B1063 4ee5094198fb41ea80cb4438a9126b39 228 SUPERFAMILY SSF54637 85 226 9.33E-32 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B1063 4ee5094198fb41ea80cb4438a9126b39 228 Gene3D G3DSA:3.10.129.10 78 228 4.2E-36 T 15-10-2018 VIBNI_B0164 b1eb61cdda1a552dc98c1845640f2c6d 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 69 1.5E-10 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_B0164 b1eb61cdda1a552dc98c1845640f2c6d 319 Gene3D G3DSA:1.20.970.10 3 71 8.2E-17 T 15-10-2018 VIBNI_B0164 b1eb61cdda1a552dc98c1845640f2c6d 319 SUPERFAMILY SSF47648 8 71 9.03E-13 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_B0164 b1eb61cdda1a552dc98c1845640f2c6d 319 Gene3D G3DSA:3.40.1030.10 72 279 6.3E-37 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_B0164 b1eb61cdda1a552dc98c1845640f2c6d 319 SUPERFAMILY SSF52418 88 276 2.35E-30 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VIBNI_B1748 b71ed7f3f6bc98616f75b893525a0e6f 96 SUPERFAMILY SSF58042 19 95 2.09E-11 T 15-10-2018 VIBNI_B1748 b71ed7f3f6bc98616f75b893525a0e6f 96 PIRSF PIRSF002855 1 96 1.9E-23 T 15-10-2018 IPR016367 Murein-lipoprotein VIBNI_B1748 b71ed7f3f6bc98616f75b893525a0e6f 96 Gene3D G3DSA:1.20.5.190 25 95 1.8E-6 T 15-10-2018 VIBNI_B1748 b71ed7f3f6bc98616f75b893525a0e6f 96 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 30 96 7.0E-16 T 15-10-2018 IPR021793 Major outer membrane lipoprotein Oprl VIBNI_B0732 54f301543f4bfebb5392e78e6640ae9a 139 Gene3D G3DSA:3.40.630.30 35 136 1.3E-23 T 15-10-2018 VIBNI_B0732 54f301543f4bfebb5392e78e6640ae9a 139 Pfam PF13673 Acetyltransferase (GNAT) domain 31 117 7.9E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0732 54f301543f4bfebb5392e78e6640ae9a 139 SUPERFAMILY SSF55729 30 136 8.18E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0686 3d778715e3fa6699d354066923a9b9b4 306 Pfam PF00482 Type II secretion system (T2SS), protein F 139 263 1.4E-17 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A0562 43a6f7fcdac270700c35fee1860dedd9 190 Pfam PF03923 Uncharacterized lipoprotein 29 187 7.3E-47 T 15-10-2018 IPR005619 Uncharacterised protein family, YajG VIBNI_B1759 12381cc5424946c6d89cffbbc6d555db 297 SUPERFAMILY SSF103481 42 143 6.67E-9 T 15-10-2018 VIBNI_B1759 12381cc5424946c6d89cffbbc6d555db 297 Pfam PF00892 EamA-like transporter family 4 140 1.6E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1759 12381cc5424946c6d89cffbbc6d555db 297 Pfam PF00892 EamA-like transporter family 153 296 6.1E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1759 12381cc5424946c6d89cffbbc6d555db 297 SUPERFAMILY SSF103481 217 295 4.45E-8 T 15-10-2018 VIBNI_B1884 3c6738aa5fd9c1f547187173a1c4f2de 205 PIRSF PIRSF006324 1 204 3.7E-47 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1884 3c6738aa5fd9c1f547187173a1c4f2de 205 Pfam PF01810 LysE type translocator 15 201 8.0E-24 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 SUPERFAMILY SSF81901 54 183 1.12E-24 T 15-10-2018 VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 Pfam PF08238 Sel1 repeat 106 138 5.2E-4 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 Pfam PF08238 Sel1 repeat 68 100 4.3E-4 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 Pfam PF08238 Sel1 repeat 148 175 0.0038 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 SMART SM00671 104 139 0.014 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 SMART SM00671 68 103 0.025 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 SMART SM00671 140 175 0.0021 T 15-10-2018 IPR006597 Sel1-like repeat VIBNI_B1217 07f371b2620e794a1bd37ec9572d1cf4 190 Gene3D G3DSA:1.25.40.10 8 186 1.6E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 SUPERFAMILY SSF51556 1 342 9.87E-147 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 Gene3D G3DSA:3.20.20.140 2 342 1.7E-112 T 15-10-2018 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 PIRSF PIRSF001237 1 342 1.5E-144 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 7.9E-141 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.694 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VIBNI_B0848 795e94513e6b050e3ad8175b818c9520 342 Pfam PF01979 Amidohydrolase family 11 307 2.8E-17 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A3008 3fdd2a1ae5018aa2f7919f6ed22c3ac3 410 SUPERFAMILY SSF110849 107 171 4.71E-7 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VIBNI_B0888 09714e10d20e4b575d8cc5a1172c10b7 306 Pfam PF01497 Periplasmic binding protein 46 279 5.0E-32 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_B0888 09714e10d20e4b575d8cc5a1172c10b7 306 Gene3D G3DSA:3.40.50.1980 30 283 1.6E-90 T 15-10-2018 VIBNI_B0888 09714e10d20e4b575d8cc5a1172c10b7 306 Gene3D G3DSA:3.40.50.1980 174 277 1.6E-90 T 15-10-2018 VIBNI_B0888 09714e10d20e4b575d8cc5a1172c10b7 306 SUPERFAMILY SSF53807 22 289 2.94E-66 T 15-10-2018 VIBNI_A1096 281118233036a83a6f88965f7d1ce6c3 514 Pfam PF11840 Protein of unknown function (DUF3360) 13 514 2.4E-268 T 15-10-2018 IPR021794 Protein of unknown function DUF3360 VIBNI_A2259 3c69b6785cd64dbccf6769f9819c2005 146 Gene3D G3DSA:3.30.420.270 64 136 8.5E-17 T 15-10-2018 VIBNI_A2259 3c69b6785cd64dbccf6769f9819c2005 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 145 1.2E-25 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VIBNI_A2259 3c69b6785cd64dbccf6769f9819c2005 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.394 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VIBNI_A1291 7341ab3ca8781f3e99566932da1a8160 315 SUPERFAMILY SSF161098 72 297 1.96E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1291 7341ab3ca8781f3e99566932da1a8160 315 SUPERFAMILY SSF160964 25 66 5.1E-6 T 15-10-2018 VIBNI_A1291 7341ab3ca8781f3e99566932da1a8160 315 Gene3D G3DSA:1.10.3720.10 68 304 7.7E-69 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1291 7341ab3ca8781f3e99566932da1a8160 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 297 1.2E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1683 a42d7823228b4bb0a0327c24aca30a16 318 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 75 276 1.8E-18 T 15-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like VIBNI_A0158 141a21993e7069afe8e32c21577bba73 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 1.0E-168 T 15-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VIBNI_A0158 141a21993e7069afe8e32c21577bba73 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 219.555 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VIBNI_A0158 141a21993e7069afe8e32c21577bba73 522 SUPERFAMILY SSF55931 8 513 2.55E-202 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VIBNI_A0158 141a21993e7069afe8e32c21577bba73 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 2.2E-212 T 15-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VIBNI_A0158 141a21993e7069afe8e32c21577bba73 522 Gene3D G3DSA:3.30.590.20 17 522 2.4E-193 T 15-10-2018 VIBNI_B1185 1376e862639728a62e29953098a0d902 551 Pfam PF09818 Predicted ATPase of the ABC class 1 435 3.4E-180 T 15-10-2018 IPR019195 ABC transporter, ATPase, putative VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 SMART SM00382 319 490 3.0E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 SMART SM00382 29 196 5.6E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 SUPERFAMILY SSF52540 3 198 1.23E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 Gene3D G3DSA:3.40.50.300 288 508 4.2E-43 T 15-10-2018 VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 Pfam PF00005 ABC transporter 21 151 3.8E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 SUPERFAMILY SSF52540 285 495 3.16E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 Gene3D G3DSA:3.40.50.300 1 233 2.0E-49 T 15-10-2018 VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 Pfam PF00005 ABC transporter 313 446 6.5E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1212 1a1590450cad39473e5aaed91b2acaf1 579 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0795 bed53a170c325f6c6a2e1de929e6a23a 127 Pfam PF01124 MAPEG family 4 122 6.5E-23 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VIBNI_B0795 bed53a170c325f6c6a2e1de929e6a23a 127 SUPERFAMILY SSF161084 2 122 1.31E-23 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_B0795 bed53a170c325f6c6a2e1de929e6a23a 127 Gene3D G3DSA:1.20.120.550 1 127 1.1E-21 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 SMART SM00947 30 192 1.1E-67 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 Gene3D G3DSA:3.40.1050.10 1 217 1.8E-87 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 SUPERFAMILY SSF53056 2 212 1.57E-75 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VIBNI_A2857 9a41a0e3c39c490ac256959d989ce141 217 Pfam PF00484 Carbonic anhydrase 37 187 1.4E-50 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 Gene3D G3DSA:1.20.1050.10 83 194 5.1E-60 T 15-10-2018 VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 SUPERFAMILY SSF52833 1 83 3.19E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 Gene3D G3DSA:3.40.30.10 4 202 5.1E-60 T 15-10-2018 VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.1E-15 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 195 1.7E-10 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal VIBNI_B0785 9071dc68ae342b7bad546b255286b73c 212 SUPERFAMILY SSF47616 79 205 5.99E-22 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 Gene3D G3DSA:1.50.10.100 80 357 3.9E-46 T 15-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 363 607 4.2E-49 T 15-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 Gene3D G3DSA:2.70.98.10 366 610 8.0E-52 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 83 332 8.7E-26 T 15-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 SUPERFAMILY SSF48230 82 370 1.34E-39 T 15-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VIBNI_A2386 d705682b054e43fc4b79fceac11113f0 1061 SUPERFAMILY SSF74650 360 616 9.94E-46 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 SUPERFAMILY SSF53681 119 227 2.62E-24 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 Gene3D G3DSA:3.40.50.1860 5 221 5.2E-72 T 15-10-2018 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 224 9.8E-51 T 15-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 SUPERFAMILY SSF53681 3 112 4.09E-29 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 Gene3D G3DSA:3.40.50.1860 106 215 5.2E-72 T 15-10-2018 VIBNI_B0123 6af9b81afa64b6f6219a1aedbd9c13ca 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 224 3.3E-60 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VIBNI_A2761 6e1d100f4b0653fac0ab1168565b6156 164 SUPERFAMILY SSF55729 1 158 3.31E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2761 6e1d100f4b0653fac0ab1168565b6156 164 Pfam PF13673 Acetyltransferase (GNAT) domain 85 159 5.0E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2761 6e1d100f4b0653fac0ab1168565b6156 164 Gene3D G3DSA:3.40.630.30 1 159 8.8E-35 T 15-10-2018 VIBNI_A3324 da3e1f5e37da54be4a47cbc6c5adccb1 161 Gene3D G3DSA:1.20.120.1370 1 154 1.9E-49 T 15-10-2018 IPR038309 Rsd/AlgQ superfamily VIBNI_A3324 da3e1f5e37da54be4a47cbc6c5adccb1 161 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 151 8.5E-53 T 15-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VIBNI_A3324 da3e1f5e37da54be4a47cbc6c5adccb1 161 PIRSF PIRSF016548 1 161 9.7E-66 T 15-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VIBNI_A2183 148ed6f2fbb5390a9658704f2386fa34 563 TIGRFAM TIGR04456 LruC_dom: LruC domain 316 552 5.4E-74 T 15-10-2018 IPR031025 LruC domain VIBNI_A2183 148ed6f2fbb5390a9658704f2386fa34 563 Pfam PF16130 Domain of unknown function (DUF4842) 349 551 7.2E-50 T 15-10-2018 IPR032295 Domain of unknown function DUF4842 VIBNI_A3418 6ac4b8f8cb306802a127a8b118fd1a1d 294 Pfam PF00892 EamA-like transporter family 8 142 1.5E-19 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3418 6ac4b8f8cb306802a127a8b118fd1a1d 294 Pfam PF00892 EamA-like transporter family 157 287 1.5E-17 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3418 6ac4b8f8cb306802a127a8b118fd1a1d 294 SUPERFAMILY SSF103481 45 145 3.14E-13 T 15-10-2018 VIBNI_A3418 6ac4b8f8cb306802a127a8b118fd1a1d 294 SUPERFAMILY SSF103481 190 291 5.62E-10 T 15-10-2018 VIBNI_A2236 2924f53771b1eddc5a20635adbe5762f 671 TIGRFAM TIGR04096 dnd_rel_methyl: DNA phosphorothioation-associated putative methyltransferase 183 669 4.9E-183 T 15-10-2018 IPR024019 Conserved hypothetical protein CHP04096 VIBNI_B1460 e672731acd9f75211bfcb6e743152f2d 151 Pfam PF14108 Domain of unknown function (DUF4281) 6 134 2.1E-28 T 15-10-2018 IPR025461 ABA DEFICIENT 4-like VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 SUPERFAMILY SSF102114 12 287 2.22E-66 T 15-10-2018 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 10 335 36.718 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 Pfam PF04055 Radical SAM superfamily 24 187 9.3E-27 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 Gene3D G3DSA:3.20.20.70 7 335 3.8E-80 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 SMART SM00729 19 222 1.6E-4 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 192 318 3.4E-38 T 15-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 335 2.2E-103 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VIBNI_A0917 61f00bc2f14d46e8fa9e34affe98fc75 335 Pfam PF13353 4Fe-4S single cluster domain 28 131 1.1E-9 T 15-10-2018 VIBNI_B2148 0e52a127f7396e9917b0962d9507c7c1 155 SMART SM01022 30 153 1.5E-34 T 15-10-2018 IPR007374 ASCH domain VIBNI_B2148 0e52a127f7396e9917b0962d9507c7c1 155 Pfam PF04266 ASCH domain 40 153 6.9E-23 T 15-10-2018 IPR007374 ASCH domain VIBNI_B2148 0e52a127f7396e9917b0962d9507c7c1 155 SUPERFAMILY SSF88697 4 154 1.32E-48 T 15-10-2018 IPR015947 PUA-like superfamily VIBNI_B2148 0e52a127f7396e9917b0962d9507c7c1 155 Gene3D G3DSA:3.10.400.10 1 153 6.8E-56 T 15-10-2018 VIBNI_B2148 0e52a127f7396e9917b0962d9507c7c1 155 PIRSF PIRSF021320 1 155 1.2E-46 T 15-10-2018 IPR009326 Protein of unknown function DUF984 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 Gene3D G3DSA:3.40.50.720 179 316 2.4E-99 T 15-10-2018 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 SMART SM00829 29 367 3.8E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 SUPERFAMILY SSF50129 15 201 2.89E-50 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 Gene3D G3DSA:3.90.180.10 28 355 2.4E-99 T 15-10-2018 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 Pfam PF00107 Zinc-binding dehydrogenase 203 319 1.5E-23 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 157 1.0E-29 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VIBNI_A0475 4928c335e0c3e15bb1a0fcaaa18c0586 369 SUPERFAMILY SSF51735 169 324 3.48E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1700 dcaab1a83c99bfdbd4686f36009f3219 183 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 5.1E-32 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1700 dcaab1a83c99bfdbd4686f36009f3219 183 Gene3D G3DSA:3.40.630.30 2 175 1.0E-46 T 15-10-2018 VIBNI_A1700 dcaab1a83c99bfdbd4686f36009f3219 183 SUPERFAMILY SSF55729 2 174 1.08E-47 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0327 44f3c065785c566c473357a377456be8 222 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 220 4.4E-100 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VIBNI_A0327 44f3c065785c566c473357a377456be8 222 Gene3D G3DSA:3.40.600.10 1 220 1.8E-54 T 15-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VIBNI_A0327 44f3c065785c566c473357a377456be8 222 SUPERFAMILY SSF52980 3 220 3.54E-81 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A0327 44f3c065785c566c473357a377456be8 222 SMART SM00927 53 151 1.2E-58 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VIBNI_A0327 44f3c065785c566c473357a377456be8 222 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 7.8E-32 T 15-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VIBNI_A0327 44f3c065785c566c473357a377456be8 222 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 222 141.947 T 15-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VIBNI_B0613 006bb82056d52435a6d17bd819f839a0 538 Gene3D G3DSA:3.40.50.12780 1 430 2.3E-109 T 15-10-2018 VIBNI_B0613 006bb82056d52435a6d17bd819f839a0 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 3.0E-16 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VIBNI_B0613 006bb82056d52435a6d17bd819f839a0 538 Gene3D G3DSA:3.30.300.310 431 528 6.4E-27 T 15-10-2018 VIBNI_B0613 006bb82056d52435a6d17bd819f839a0 538 SUPERFAMILY SSF56801 12 526 4.71E-122 T 15-10-2018 VIBNI_B0613 006bb82056d52435a6d17bd819f839a0 538 Pfam PF00501 AMP-binding enzyme 34 435 5.7E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VIBNI_A2304 4f3def972baea1155a78819292671aa7 171 Pfam PF12915 Protein of unknown function (DUF3833) 11 171 3.5E-65 T 15-10-2018 IPR024409 Protein of unknown function DUF3833 VIBNI_A2838 5bc74d79eb85d889e9c0981f3862a11c 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 121 26.881 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 VIBNI_A2838 5bc74d79eb85d889e9c0981f3862a11c 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 119 2.0E-25 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 VIBNI_A2838 5bc74d79eb85d889e9c0981f3862a11c 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 119 6.9E-38 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 VIBNI_A2838 5bc74d79eb85d889e9c0981f3862a11c 122 PIRSF PIRSF006287 1 122 2.3E-41 T 15-10-2018 IPR008249 Uncharacterised protein family UPF0231 VIBNI_B1100 a7561850c376338d7f0aeb97d2cc41e6 302 SUPERFAMILY SSF161098 83 284 1.31E-26 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1100 a7561850c376338d7f0aeb97d2cc41e6 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 301 7.1E-30 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1100 a7561850c376338d7f0aeb97d2cc41e6 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 54 1.6E-7 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_B1100 a7561850c376338d7f0aeb97d2cc41e6 302 Gene3D G3DSA:1.10.3720.10 81 299 2.9E-26 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1850 0e386a1cfd5c11e04c23353cceab43a8 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 5.9E-25 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 Pfam PF01230 HIT domain 13 108 5.9E-28 T 15-10-2018 IPR001310 Histidine triad (HIT) protein VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 15-10-2018 IPR019808 Histidine triad, conserved site VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 SUPERFAMILY SSF54197 2 113 1.06E-33 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 Gene3D G3DSA:3.30.428.10 1 111 4.0E-34 T 15-10-2018 IPR036265 HIT-like superfamily VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 PRINTS PR00332 Histidine triad family signature 27 45 2.7E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 PRINTS PR00332 Histidine triad family signature 6 22 2.7E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein VIBNI_A1060 a2f48e287c17e69eba108b5d98f8df33 116 PRINTS PR00332 Histidine triad family signature 95 105 2.7E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 Gene3D G3DSA:1.10.150.240 17 82 2.8E-49 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 SUPERFAMILY SSF56784 1 215 4.07E-49 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 184 2.1E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 Gene3D G3DSA:3.40.50.1000 5 188 2.8E-49 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 3.5E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B1405 8b7dc30456718c70d39edfd3b4e13ddb 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 2.0E-30 T 15-10-2018 VIBNI_B1410 d2c0599771a3d7aa6cce9c4c2ecec7e9 94 Pfam PF14542 GCN5-related N-acetyl-transferase 16 92 9.0E-19 T 15-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VIBNI_B1410 d2c0599771a3d7aa6cce9c4c2ecec7e9 94 Gene3D G3DSA:3.40.630.30 6 94 2.7E-20 T 15-10-2018 VIBNI_B1410 d2c0599771a3d7aa6cce9c4c2ecec7e9 94 SUPERFAMILY SSF55729 5 93 2.75E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1067 2d307346235d584c46cebca713ad5277 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 5.7E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1067 2d307346235d584c46cebca713ad5277 282 Gene3D G3DSA:1.10.3720.10 6 270 3.8E-53 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1067 2d307346235d584c46cebca713ad5277 282 SUPERFAMILY SSF161098 11 282 2.62E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1939 56c473aa9f5411ccc3f9721b4c146e76 398 Pfam PF07690 Major Facilitator Superfamily 11 347 8.0E-25 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1939 56c473aa9f5411ccc3f9721b4c146e76 398 Gene3D G3DSA:1.20.1250.20 1 196 6.6E-19 T 15-10-2018 VIBNI_B1939 56c473aa9f5411ccc3f9721b4c146e76 398 Gene3D G3DSA:1.20.1250.20 204 394 5.7E-18 T 15-10-2018 VIBNI_B1939 56c473aa9f5411ccc3f9721b4c146e76 398 SUPERFAMILY SSF103473 4 383 1.11E-44 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1787 0deb92ee5278090da9727297ed1df56c 328 SUPERFAMILY SSF51735 127 276 5.44E-9 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1787 0deb92ee5278090da9727297ed1df56c 328 Gene3D G3DSA:3.40.50.720 137 284 1.6E-17 T 15-10-2018 VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 Gene3D G3DSA:3.40.50.1820 2 270 9.9E-56 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 Pfam PF00561 alpha/beta hydrolase fold 20 254 3.5E-18 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 SUPERFAMILY SSF53474 3 268 4.57E-61 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.0E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.0E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.0E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2865 b7c1960d7725df68006cc1fe389fae3e 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.0E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A3848 3585214f43b4b8dc63014cdb7015c745 324 Pfam PF11059 Protein of unknown function (DUF2860) 28 323 4.6E-89 T 15-10-2018 IPR016896 Protein of unknown function DUF2860 VIBNI_A3848 3585214f43b4b8dc63014cdb7015c745 324 PIRSF PIRSF028696 1 324 1.7E-89 T 15-10-2018 IPR016896 Protein of unknown function DUF2860 VIBNI_A3848 3585214f43b4b8dc63014cdb7015c745 324 SUPERFAMILY SSF56935 18 323 1.04E-5 T 15-10-2018 VIBNI_B0762 645a4499e5faf4daa63e093d469d9263 333 SUPERFAMILY SSF53822 40 297 4.04E-46 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0762 645a4499e5faf4daa63e093d469d9263 333 Pfam PF13407 Periplasmic binding protein domain 42 297 1.6E-39 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0762 645a4499e5faf4daa63e093d469d9263 333 Gene3D G3DSA:3.40.50.2300 43 296 1.0E-64 T 15-10-2018 VIBNI_B0762 645a4499e5faf4daa63e093d469d9263 333 Gene3D G3DSA:3.40.50.2300 144 286 1.0E-64 T 15-10-2018 VIBNI_B1727 df12fc1bca9e18ac9f45fb110f49d045 321 SUPERFAMILY SSF81606 2 132 2.35E-8 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_B1727 df12fc1bca9e18ac9f45fb110f49d045 321 Pfam PF13672 Protein phosphatase 2C 12 130 2.1E-6 T 15-10-2018 VIBNI_B1727 df12fc1bca9e18ac9f45fb110f49d045 321 Gene3D G3DSA:3.60.40.10 1 154 2.3E-10 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A0295 bd225246929b1060598d61b9ac3b5341 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 134 1.6E-14 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VIBNI_A0295 bd225246929b1060598d61b9ac3b5341 183 Gene3D G3DSA:1.20.120.520 1 153 4.4E-17 T 15-10-2018 VIBNI_A0022 f7be8bdcb7011113974d92056d4c462a 304 PIRSF PIRSF011468 20 303 4.8E-163 T 15-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A0022 f7be8bdcb7011113974d92056d4c462a 304 Pfam PF06007 Phosphonate metabolism protein PhnJ 29 300 2.0E-148 T 15-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VIBNI_A2648 18bd94a3026d764cdc8f32955be2e9c2 142 Pfam PF02169 LPP20 lipoprotein 24 117 1.1E-6 T 15-10-2018 IPR024952 Lipoprotein LPP20-like VIBNI_A2648 18bd94a3026d764cdc8f32955be2e9c2 142 PIRSF PIRSF028687 1 142 1.2E-53 T 15-10-2018 IPR007293 Flagellar protein FlgP VIBNI_B0860 af956e6248bffa9bae09df2dcb6908b0 153 Gene3D G3DSA:1.10.357.10 1 153 6.8E-59 T 15-10-2018 VIBNI_B0860 af956e6248bffa9bae09df2dcb6908b0 153 SUPERFAMILY SSF46689 1 74 3.44E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0860 af956e6248bffa9bae09df2dcb6908b0 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.5E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A3466 75e3a04ba7b0f4a8a796cb13e12f7586 198 Pfam PF01864 CDP-archaeol synthase 6 198 2.5E-15 T 15-10-2018 IPR032690 CDP-archaeol synthase KEGG: 00564+2.7.7.67|MetaCyc: PWY-6349 VIBNI_B0709 c81f983307112fe63f11821888deda35 531 Pfam PF00005 ABC transporter 364 489 1.4E-13 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0709 c81f983307112fe63f11821888deda35 531 Pfam PF00005 ABC transporter 34 180 1.7E-14 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0709 c81f983307112fe63f11821888deda35 531 SUPERFAMILY SSF52540 6 247 3.58E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0709 c81f983307112fe63f11821888deda35 531 SUPERFAMILY SSF52540 364 521 7.79E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0709 c81f983307112fe63f11821888deda35 531 SMART SM00382 370 529 0.025 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0709 c81f983307112fe63f11821888deda35 531 SMART SM00382 33 224 2.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0709 c81f983307112fe63f11821888deda35 531 Gene3D G3DSA:3.40.50.300 309 527 9.9E-30 T 15-10-2018 VIBNI_B0709 c81f983307112fe63f11821888deda35 531 Gene3D G3DSA:3.40.50.300 2 277 2.2E-42 T 15-10-2018 VIBNI_A1884 22c87f8bfbbdf701f931a64e0b554172 369 SUPERFAMILY SSF53822 45 366 6.42E-44 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1884 22c87f8bfbbdf701f931a64e0b554172 369 Pfam PF13407 Periplasmic binding protein domain 68 327 7.9E-12 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1884 22c87f8bfbbdf701f931a64e0b554172 369 Gene3D G3DSA:3.40.50.2300 180 362 1.7E-91 T 15-10-2018 VIBNI_A1884 22c87f8bfbbdf701f931a64e0b554172 369 Gene3D G3DSA:3.40.50.2300 41 366 1.7E-91 T 15-10-2018 VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 4.9E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 SUPERFAMILY SSF47384 220 285 7.65E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 1.7E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 1.7E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 SUPERFAMILY SSF55874 304 440 4.32E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 SMART SM00387 337 444 8.0E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 Gene3D G3DSA:1.10.287.130 182 286 1.0E-8 T 15-10-2018 VIBNI_A2218 aaea789c6a76f82b6a2a4d30395e6b80 449 Gene3D G3DSA:3.30.565.10 304 445 5.8E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1275 358b37e45562e6fc67175f4b49e8ef32 114 Gene3D G3DSA:3.10.180.10 2 103 2.1E-7 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1275 358b37e45562e6fc67175f4b49e8ef32 114 SUPERFAMILY SSF54593 1 100 4.81E-5 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A1862 5c9055618b3054996133a6496e4b52c7 145 Gene3D G3DSA:1.25.40.20 8 141 1.4E-7 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_A1862 5c9055618b3054996133a6496e4b52c7 145 SUPERFAMILY SSF48403 3 105 1.24E-7 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 Pfam PF00303 Thymidylate synthase 7 286 1.4E-78 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 Gene3D G3DSA:3.30.572.10 1 286 3.9E-86 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 Hamap MF_00008 Thymidylate synthase [thyA]. 5 286 33.384 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 SUPERFAMILY SSF55831 6 286 1.7E-93 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 48 69 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 133 152 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 215 232 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 177 203 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 7 286 9.9E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_B1969 b9e38245d7d017a289b3ac148233e49b 286 ProSitePatterns PS00091 Thymidylate synthase active site. 144 172 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 Pfam PF00303 Thymidylate synthase 7 286 1.4E-78 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 Gene3D G3DSA:3.30.572.10 1 286 3.9E-86 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 Hamap MF_00008 Thymidylate synthase [thyA]. 5 286 33.384 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 SUPERFAMILY SSF55831 6 286 1.7E-93 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 48 69 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 133 152 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 215 232 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 PRINTS PR00108 Thymidylate synthase family signature 177 203 2.2E-14 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 7 286 9.9E-47 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A0338 b9e38245d7d017a289b3ac148233e49b 286 ProSitePatterns PS00091 Thymidylate synthase active site. 144 172 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 Gene3D G3DSA:3.30.1460.30 3 102 2.0E-16 T 15-10-2018 VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 Gene3D G3DSA:1.10.150.20 111 195 1.3E-16 T 15-10-2018 VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 PIRSF PIRSF028788 7 195 3.8E-32 T 15-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 Pfam PF04994 TfoX C-terminal domain 112 190 6.0E-27 T 15-10-2018 IPR007077 TfoX, C-terminal VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 SUPERFAMILY SSF159894 5 100 2.28E-24 T 15-10-2018 VIBNI_A1116 813d1f2d0d5ad5497433eb8a0e254b70 195 Pfam PF04993 TfoX N-terminal domain 10 98 8.2E-21 T 15-10-2018 IPR007076 TfoX, N-terminal VIBNI_A1435 804d652f93d3ce1ae50fbbd8e39a0594 173 PIRSF PIRSF028301 1 173 2.6E-66 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_A1435 804d652f93d3ce1ae50fbbd8e39a0594 173 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 5.1E-60 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_A1435 804d652f93d3ce1ae50fbbd8e39a0594 173 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 1.0E-61 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 546 2.3E-40 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 SUPERFAMILY SSF58104 271 580 9.02E-73 T 15-10-2018 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 Pfam PF00672 HAMP domain 253 300 2.0E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 SMART SM00304 249 303 9.6E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 Gene3D G3DSA:1.10.287.950 249 581 1.6E-68 T 15-10-2018 VIBNI_B1528 e5ad163427ae234cb0cccdd2d5642266 581 SMART SM00283 318 579 1.6E-58 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1978 188820d2f4df04f5f9fbff2ac41c3d9c 432 Pfam PF01266 FAD dependent oxidoreductase 30 384 1.1E-39 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VIBNI_B1978 188820d2f4df04f5f9fbff2ac41c3d9c 432 SUPERFAMILY SSF51905 29 404 1.2E-38 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1978 188820d2f4df04f5f9fbff2ac41c3d9c 432 Gene3D G3DSA:3.30.9.10 124 345 3.1E-54 T 15-10-2018 VIBNI_B1978 188820d2f4df04f5f9fbff2ac41c3d9c 432 Gene3D G3DSA:3.50.50.60 30 384 3.1E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A2981 869ddd767268e6350951114490be9141 1287 Pfam PF13502 AsmA-like C-terminal region 1028 1268 6.1E-59 T 15-10-2018 IPR032712 AsmA-like, C-terminal VIBNI_A2981 869ddd767268e6350951114490be9141 1287 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 8 1278 0.0 T 15-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VIBNI_A2981 869ddd767268e6350951114490be9141 1287 Pfam PF13116 Protein of unknown function 508 792 5.1E-90 T 15-10-2018 IPR025263 Domain of unknown function DUF3971 VIBNI_A0023 d77b005a880412e3cb11412810d215b3 364 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 2.5E-156 T 15-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 VIBNI_A0023 d77b005a880412e3cb11412810d215b3 364 PIRSF PIRSF007313 1 361 1.3E-158 T 15-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 VIBNI_B1680 e31b203dbc98c571f6d7ab0a201f4a9f 196 SUPERFAMILY SSF51206 28 148 1.19E-15 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_B1680 e31b203dbc98c571f6d7ab0a201f4a9f 196 Gene3D G3DSA:2.60.120.10 9 146 6.6E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A0589 11660eaa795efa652db0e1f350168bf0 246 Pfam PF13795 HupE / UreJ protein 63 214 8.8E-50 T 15-10-2018 IPR032809 Putative HupE/UreJ protein VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 195 3.0E-14 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.485 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 SUPERFAMILY SSF53223 6 105 2.59E-31 T 15-10-2018 VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 Gene3D G3DSA:3.40.50.10860 8 258 1.9E-83 T 15-10-2018 VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 SUPERFAMILY SSF51735 106 273 2.63E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 7.4E-89 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 Gene3D G3DSA:3.40.50.720 119 239 1.9E-83 T 15-10-2018 VIBNI_A3827 0584f58952c3df89b35d171e3e7e9d04 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 1.4E-23 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 Pfam PF08402 TOBE domain 284 354 1.2E-11 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 SMART SM00382 28 211 9.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 SUPERFAMILY SSF50331 236 361 1.63E-28 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 Gene3D G3DSA:2.40.50.140 290 346 1.2E-36 T 15-10-2018 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 Gene3D G3DSA:2.40.50.940 222 355 1.2E-36 T 15-10-2018 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 SUPERFAMILY SSF52540 4 242 2.59E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 Gene3D G3DSA:3.40.50.300 3 221 3.3E-65 T 15-10-2018 VIBNI_B0084 f3bd624e49a97be8f95883ae6db44410 362 Pfam PF00005 ABC transporter 22 161 3.7E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0007 0c3e7bf7e7e7cf842ee2b1f0c82f00aa 119 Gene3D G3DSA:3.40.50.12740 2 119 1.4E-39 T 15-10-2018 VIBNI_B0007 0c3e7bf7e7e7cf842ee2b1f0c82f00aa 119 SMART SM00448 2 115 8.4E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0007 0c3e7bf7e7e7cf842ee2b1f0c82f00aa 119 Pfam PF00072 Response regulator receiver domain 4 115 2.4E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0007 0c3e7bf7e7e7cf842ee2b1f0c82f00aa 119 SUPERFAMILY SSF52172 1 119 2.85E-38 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A2284 3f16a952090095c3d5e2d5dbe38c01a4 168 SUPERFAMILY SSF54427 25 127 6.75E-33 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A2284 3f16a952090095c3d5e2d5dbe38c01a4 168 SUPERFAMILY SSF103642 148 168 4.25E-8 T 15-10-2018 VIBNI_A2284 3f16a952090095c3d5e2d5dbe38c01a4 168 Gene3D G3DSA:3.10.450.50 1 168 1.2E-52 T 15-10-2018 VIBNI_A2284 3f16a952090095c3d5e2d5dbe38c01a4 168 Pfam PF02810 SEC-C motif 151 168 7.9E-10 T 15-10-2018 IPR004027 SEC-C motif VIBNI_A0058 6e2dde2118b9d6df9ce68f3291f5e87d 368 Gene3D G3DSA:3.30.450.90 1 97 7.3E-25 T 15-10-2018 VIBNI_A0058 6e2dde2118b9d6df9ce68f3291f5e87d 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 4.1E-128 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VIBNI_A0058 6e2dde2118b9d6df9ce68f3291f5e87d 368 Pfam PF00437 Type II/IV secretion system protein 112 269 2.1E-37 T 15-10-2018 IPR001482 Type II/IV secretion system protein VIBNI_A0058 6e2dde2118b9d6df9ce68f3291f5e87d 368 SUPERFAMILY SSF52540 3 334 2.43E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A0058 6e2dde2118b9d6df9ce68f3291f5e87d 368 Gene3D G3DSA:3.40.50.300 98 355 3.5E-88 T 15-10-2018 VIBNI_A2365 59f51b2da07dc47cd25c41be40955983 56 SUPERFAMILY SSF57829 2 55 4.58E-17 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VIBNI_A2365 59f51b2da07dc47cd25c41be40955983 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.001 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2365 59f51b2da07dc47cd25c41be40955983 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.0E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2365 59f51b2da07dc47cd25c41be40955983 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 5.3E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_B2083 17c5a2410adc365f5a221c1c4aeed882 750 SUPERFAMILY SSF52317 462 552 5.72E-8 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B2083 17c5a2410adc365f5a221c1c4aeed882 750 Gene3D G3DSA:2.60.120.200 74 261 7.5E-6 T 15-10-2018 VIBNI_B2083 17c5a2410adc365f5a221c1c4aeed882 750 SUPERFAMILY SSF49899 80 261 6.62E-9 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VIBNI_B0472 158956c916e67caf7b5b6a47affe2fdd 377 Pfam PF04209 homogentisate 1,2-dioxygenase 83 373 6.1E-22 T 15-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VIBNI_B0472 158956c916e67caf7b5b6a47affe2fdd 377 Gene3D G3DSA:2.60.120.10 251 351 1.8E-5 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B0472 158956c916e67caf7b5b6a47affe2fdd 377 SUPERFAMILY SSF51182 57 374 8.22E-87 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B0472 158956c916e67caf7b5b6a47affe2fdd 377 Gene3D G3DSA:2.60.120.10 70 165 2.2E-9 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A0579 2c6d94d6b0716fcc9417e3c03514fe22 189 SUPERFAMILY SSF48452 110 187 1.1E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0579 2c6d94d6b0716fcc9417e3c03514fe22 189 Gene3D G3DSA:1.25.40.10 91 187 1.3E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0579 2c6d94d6b0716fcc9417e3c03514fe22 189 Pfam PF00515 Tetratricopeptide repeat 144 176 4.8E-7 T 15-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 VIBNI_A0579 2c6d94d6b0716fcc9417e3c03514fe22 189 SMART SM00028 110 143 230.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A0579 2c6d94d6b0716fcc9417e3c03514fe22 189 SMART SM00028 144 177 8.7E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 Gene3D G3DSA:3.40.50.2020 148 290 8.4E-135 T 15-10-2018 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 SUPERFAMILY SSF53271 69 306 1.74E-66 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-50 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.9 T 15-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 Gene3D G3DSA:3.40.50.2020 7 302 8.4E-135 T 15-10-2018 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.3E-29 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 SMART SM01400 4 121 7.0E-78 T 15-10-2018 VIBNI_A2684 295ae47abff750ab87fc632dea115c39 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.7E-125 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VIBNI_B1869 68a2cb604642edc01b3400e65251d1dc 154 Gene3D G3DSA:1.20.120.450 1 154 8.6E-41 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VIBNI_B1869 68a2cb604642edc01b3400e65251d1dc 154 SUPERFAMILY SSF109854 2 147 4.67E-30 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VIBNI_B1869 68a2cb604642edc01b3400e65251d1dc 154 Pfam PF09351 Domain of unknown function (DUF1993) 15 140 1.2E-23 T 15-10-2018 IPR018531 Protein of unknown function DUF1993 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 SUPERFAMILY SSF103473 7 383 3.79E-47 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 Gene3D G3DSA:1.20.1250.20 5 386 2.3E-50 T 15-10-2018 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 Pfam PF07690 Major Facilitator Superfamily 8 352 1.4E-33 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 PRINTS PR01035 Tetracycline resistance protein signature 249 269 4.8E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 PRINTS PR01035 Tetracycline resistance protein signature 336 359 4.8E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 PRINTS PR01035 Tetracycline resistance protein signature 10 26 4.8E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VIBNI_B0317 f6f403ab7469e10af0c6af8ca189b3d7 402 PRINTS PR01035 Tetracycline resistance protein signature 70 94 4.8E-6 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VIBNI_B0639 25a229cb4d8f99433d6ca4644972f969 299 Gene3D G3DSA:1.10.3720.10 96 288 2.7E-35 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0639 25a229cb4d8f99433d6ca4644972f969 299 SUPERFAMILY SSF161098 99 281 3.14E-39 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0639 25a229cb4d8f99433d6ca4644972f969 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 278 1.4E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1468 ad38390d3b3d6c00c535782cd23a8578 406 Pfam PF12704 MacB-like periplasmic core domain 19 236 3.8E-22 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_B1468 ad38390d3b3d6c00c535782cd23a8578 406 Pfam PF02687 FtsX-like permease family 305 398 1.3E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A3049 1ce0e8a709883e307f85d8d9e26f7d77 239 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 235 36.731 T 15-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VIBNI_A3049 1ce0e8a709883e307f85d8d9e26f7d77 239 SUPERFAMILY SSF88713 1 238 1.22E-70 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A3049 1ce0e8a709883e307f85d8d9e26f7d77 239 Gene3D G3DSA:3.20.20.370 1 238 6.7E-72 T 15-10-2018 VIBNI_A3049 1ce0e8a709883e307f85d8d9e26f7d77 239 Pfam PF04794 YdjC-like protein 2 226 2.5E-53 T 15-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 485 7.7E-37 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 SUPERFAMILY SSF58104 263 518 1.57E-59 T 15-10-2018 VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 SUPERFAMILY SSF55785 20 114 6.46E-26 T 15-10-2018 IPR035965 PAS domain superfamily VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 Gene3D G3DSA:3.30.450.20 8 117 9.2E-24 T 15-10-2018 VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 113 1.8E-13 T 15-10-2018 IPR000014 PAS domain VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 Pfam PF08447 PAS fold 31 114 2.5E-15 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 Gene3D G3DSA:1.10.287.950 192 519 5.5E-55 T 15-10-2018 VIBNI_B0171 ce4361aa5834668285a7cf5672230ac8 520 SMART SM00283 257 518 2.4E-54 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A0573 af209a23129b1fbb50110bc6f2339108 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 4.6E-21 T 15-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VIBNI_A1241 643b1e25a0000ff8c3ec38f3fdee5f53 375 Pfam PF13416 Bacterial extracellular solute-binding protein 57 309 3.6E-11 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1241 643b1e25a0000ff8c3ec38f3fdee5f53 375 Gene3D G3DSA:3.40.190.10 1 370 1.8E-39 T 15-10-2018 VIBNI_A1241 643b1e25a0000ff8c3ec38f3fdee5f53 375 SUPERFAMILY SSF53850 3 372 1.36E-44 T 15-10-2018 VIBNI_A0758 ead2a9a3f363ff81642352ddc539dc20 164 Gene3D G3DSA:1.10.8.640 21 106 3.6E-35 T 15-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VIBNI_A0758 ead2a9a3f363ff81642352ddc539dc20 164 Pfam PF03918 Cytochrome C biogenesis protein 12 153 3.1E-52 T 15-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VIBNI_B1788 5e08b7b662f5ce5f03cbcbd776a90131 209 PIRSF PIRSF019325 1 205 1.0E-67 T 15-10-2018 IPR016758 Glucose-6-phosphate isomerase, archaea/bacteria GO:0004347|GO:0005506 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 VIBNI_B1788 5e08b7b662f5ce5f03cbcbd776a90131 209 Gene3D G3DSA:2.60.120.10 1 203 9.8E-63 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B1788 5e08b7b662f5ce5f03cbcbd776a90131 209 SUPERFAMILY SSF51182 6 191 4.23E-34 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_B1788 5e08b7b662f5ce5f03cbcbd776a90131 209 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 26 191 5.0E-54 T 15-10-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 Gene3D G3DSA:3.40.50.2300 4 118 2.8E-13 T 15-10-2018 VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 Pfam PF03861 ANTAR domain 130 176 9.6E-11 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 PIRSF PIRSF036382 2 183 4.6E-26 T 15-10-2018 IPR008327 Signal transduction response regulator, antiterminator VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 Gene3D G3DSA:1.10.10.10 120 185 1.4E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 SUPERFAMILY SSF52172 10 176 1.9E-25 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1665 2707f5a12d285a0eb689747489692d26 193 SMART SM01012 118 180 2.9E-7 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 VIBNI_B0484 e684f69c9a00160fc959a25e3fb880c1 309 Pfam PF11376 Protein of unknown function (DUF3179) 48 304 1.3E-92 T 15-10-2018 IPR021516 Protein of unknown function DUF3179 VIBNI_A0649 8ead1eec2fd99ed929f462f85062b322 129 Pfam PF07417 Transcriptional regulator Crl 6 122 8.4E-47 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VIBNI_A0649 8ead1eec2fd99ed929f462f85062b322 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 29.486 T 15-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VIBNI_A0649 8ead1eec2fd99ed929f462f85062b322 129 Gene3D G3DSA:3.30.310.230 2 128 5.6E-45 T 15-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VIBNI_A1093 fd91200e215840548021053e37b37b59 316 Gene3D G3DSA:2.40.128.140 23 314 1.9E-52 T 15-10-2018 IPR037107 Putative outer membrane protein superfamily VIBNI_A1093 fd91200e215840548021053e37b37b59 316 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 314 1.7E-69 T 15-10-2018 IPR018707 Protein of unknown function DUF2219 VIBNI_B0870 8fef19a6691cd507b8e19de88e404d58 408 SUPERFAMILY SSF53822 42 363 9.08E-26 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0870 8fef19a6691cd507b8e19de88e404d58 408 Pfam PF13458 Periplasmic binding protein 36 364 4.7E-16 T 15-10-2018 IPR028081 Leucine-binding protein domain VIBNI_B0870 8fef19a6691cd507b8e19de88e404d58 408 Gene3D G3DSA:3.40.50.2300 43 368 1.7E-24 T 15-10-2018 VIBNI_B0870 8fef19a6691cd507b8e19de88e404d58 408 Gene3D G3DSA:3.40.50.2300 145 282 1.7E-24 T 15-10-2018 VIBNI_A1346 4394bc5d6ec7cec67a3333eadedfc363 388 SUPERFAMILY SSF56796 4 384 3.66E-115 T 15-10-2018 VIBNI_A1346 4394bc5d6ec7cec67a3333eadedfc363 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 372 2.6E-109 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VIBNI_A1346 4394bc5d6ec7cec67a3333eadedfc363 388 Gene3D G3DSA:3.40.50.1970 2 189 3.1E-51 T 15-10-2018 VIBNI_A1346 4394bc5d6ec7cec67a3333eadedfc363 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 178 206 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VIBNI_A1346 4394bc5d6ec7cec67a3333eadedfc363 388 Gene3D G3DSA:1.20.1090.10 190 387 3.7E-52 T 15-10-2018 VIBNI_A1782 6ab9b9602eec8dd073337258add188e2 607 Pfam PF11949 Protein of unknown function (DUF3466) 5 607 1.9E-76 T 15-10-2018 IPR022562 Protein of unknown function DUF3466 VIBNI_A2302 8fb5a3cdfc8907a455e5413a347318b7 183 Pfam PF07445 Primosomal replication protein priC 6 179 2.4E-44 T 15-10-2018 IPR010890 Primosomal replication PriB/PriC VIBNI_A2302 8fb5a3cdfc8907a455e5413a347318b7 183 Gene3D G3DSA:1.20.1270.340 2 99 3.9E-15 T 15-10-2018 IPR038338 PriB/PriC superfamily VIBNI_B0671 cd5c5b9ff488ddc5966c0b5b7987f53c 254 SUPERFAMILY SSF55729 70 144 3.09E-6 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0671 cd5c5b9ff488ddc5966c0b5b7987f53c 254 Gene3D G3DSA:3.40.630.30 6 149 1.0E-5 T 15-10-2018 VIBNI_B0671 cd5c5b9ff488ddc5966c0b5b7987f53c 254 Pfam PF14268 YoaP-like 203 248 3.3E-17 T 15-10-2018 IPR025685 YoaP-like domain VIBNI_B0464 796d8251f3e94a5c1c04b2579420844d 218 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 10 214 1.9E-63 T 15-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 VIBNI_B0464 796d8251f3e94a5c1c04b2579420844d 218 Pfam PF01144 Coenzyme A transferase 10 214 2.9E-63 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_B0464 796d8251f3e94a5c1c04b2579420844d 218 SUPERFAMILY SSF100950 3 215 9.94E-72 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B0464 796d8251f3e94a5c1c04b2579420844d 218 SMART SM00882 4 215 1.3E-63 T 15-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VIBNI_B0464 796d8251f3e94a5c1c04b2579420844d 218 Gene3D G3DSA:3.40.1080.10 1 218 3.5E-74 T 15-10-2018 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 Gene3D G3DSA:3.40.640.10 17 257 5.1E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 Gene3D G3DSA:3.90.1150.10 258 360 1.6E-41 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 PIRSF PIRSF000525 1 360 9.8E-154 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 52.354 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 1.5E-162 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 Pfam PF00266 Aminotransferase class-V 4 348 7.7E-65 T 15-10-2018 IPR000192 Aminotransferase class V domain VIBNI_A1128 3f19724bdaf20b7cb8c6f04284565594 360 SUPERFAMILY SSF53383 1 355 3.29E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A1807 41f6db64f3182536fec8c3178cda7955 400 SUPERFAMILY SSF161098 90 381 2.33E-31 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1807 41f6db64f3182536fec8c3178cda7955 400 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 267 395 1.6E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1807 41f6db64f3182536fec8c3178cda7955 400 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 154 3.3E-17 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VIBNI_A1807 41f6db64f3182536fec8c3178cda7955 400 Gene3D G3DSA:1.10.3720.10 188 396 4.6E-30 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2459 35f5f2b22ad801f9999c02425d841d2d 87 SUPERFAMILY SSF55229 34 85 5.89E-18 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VIBNI_A2459 35f5f2b22ad801f9999c02425d841d2d 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 1.0E-25 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VIBNI_A2459 35f5f2b22ad801f9999c02425d841d2d 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 2.2E-34 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VIBNI_A2459 35f5f2b22ad801f9999c02425d841d2d 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 19.6 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VIBNI_A2459 35f5f2b22ad801f9999c02425d841d2d 87 Gene3D G3DSA:3.30.1070.10 1 84 3.0E-27 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VIBNI_A0528 5758a0dc06ae5dab847898e7bdaf9f10 184 SUPERFAMILY SSF110857 1 123 2.75E-12 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VIBNI_A0528 5758a0dc06ae5dab847898e7bdaf9f10 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 106 1.8E-9 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VIBNI_A0528 5758a0dc06ae5dab847898e7bdaf9f10 184 Gene3D G3DSA:3.10.490.10 1 109 9.9E-9 T 15-10-2018 VIBNI_A3447 8863fe50c96c99c9b1649e7e185e26fc 275 Gene3D G3DSA:3.40.1350.10 9 172 9.8E-51 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VIBNI_A3447 8863fe50c96c99c9b1649e7e185e26fc 275 SUPERFAMILY SSF52980 10 172 5.2E-49 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A3447 8863fe50c96c99c9b1649e7e185e26fc 275 Pfam PF08722 TnsA endonuclease N terminal 75 168 1.6E-21 T 15-10-2018 IPR014833 TnsA endonuclease, N-terminal VIBNI_A2025 8863fe50c96c99c9b1649e7e185e26fc 275 Gene3D G3DSA:3.40.1350.10 9 172 9.8E-51 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VIBNI_A2025 8863fe50c96c99c9b1649e7e185e26fc 275 SUPERFAMILY SSF52980 10 172 5.2E-49 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VIBNI_A2025 8863fe50c96c99c9b1649e7e185e26fc 275 Pfam PF08722 TnsA endonuclease N terminal 75 168 1.6E-21 T 15-10-2018 IPR014833 TnsA endonuclease, N-terminal VIBNI_B0764 54842d9597d19e4aed9c4eb100f86a85 245 Pfam PF00005 ABC transporter 22 177 2.3E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0764 54842d9597d19e4aed9c4eb100f86a85 245 Gene3D G3DSA:3.40.50.300 2 241 1.6E-61 T 15-10-2018 VIBNI_B0764 54842d9597d19e4aed9c4eb100f86a85 245 SUPERFAMILY SSF52540 5 232 1.78E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0764 54842d9597d19e4aed9c4eb100f86a85 245 SMART SM00382 31 234 5.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1459 dbc96e925949b9b8fd3b4027aa7b9202 192 SUPERFAMILY SSF51206 4 135 7.59E-17 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A1459 dbc96e925949b9b8fd3b4027aa7b9202 192 Gene3D G3DSA:2.60.120.10 2 141 8.0E-19 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A2535 4685cccb63dd2cdbbd2a590a67b6a1ac 200 Pfam PF06185 YecM protein 13 196 1.6E-64 T 15-10-2018 IPR010393 Protein of unknown function DUF991 VIBNI_A2535 4685cccb63dd2cdbbd2a590a67b6a1ac 200 Gene3D G3DSA:3.10.180.10 6 199 1.8E-62 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2535 4685cccb63dd2cdbbd2a590a67b6a1ac 200 SUPERFAMILY SSF54593 8 197 2.36E-63 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A0526 40af4b7f9918ea3763fb9cc2215cd728 451 Pfam PF02447 GntP family permease 1 449 3.6E-99 T 15-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VIBNI_A3141 7a61de549dc0fd917b1045fe51da4c44 285 Pfam PF00892 EamA-like transporter family 145 270 2.4E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3141 7a61de549dc0fd917b1045fe51da4c44 285 Pfam PF00892 EamA-like transporter family 9 139 4.6E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3141 7a61de549dc0fd917b1045fe51da4c44 285 SUPERFAMILY SSF103481 43 143 4.18E-13 T 15-10-2018 VIBNI_A3141 7a61de549dc0fd917b1045fe51da4c44 285 SUPERFAMILY SSF103481 180 271 5.1E-12 T 15-10-2018 VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 140 44.154 T 15-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 SUPERFAMILY SSF46785 2 131 1.42E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 Gene3D G3DSA:1.10.10.10 1 136 9.1E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 Pfam PF02082 Transcriptional regulator 2 82 6.0E-21 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type VIBNI_A3210 88a614db9fc063f4e742260c54d16da5 140 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 3.2E-32 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type VIBNI_B0583 48632211bae28b966fbf87fb477977d3 176 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 26 0.0013 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 Gene3D G3DSA:1.10.10.10 2 86 5.7E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 Gene3D G3DSA:3.40.190.290 93 292 6.2E-19 T 15-10-2018 VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 SUPERFAMILY SSF46785 4 83 4.28E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 Pfam PF03466 LysR substrate binding domain 102 259 6.0E-8 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.9E-11 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0257 2b55e1edd5ba8e95ef2889a8e119e064 296 SUPERFAMILY SSF53850 98 279 1.28E-12 T 15-10-2018 VIBNI_B0844 fc7d251b99e2cbb9755657648ef1b2cb 160 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 13 150 3.9E-14 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 VIBNI_B1395 daa92f1448cbabcdd92201edd855498f 353 SUPERFAMILY SSF88713 30 273 3.21E-27 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_B1395 daa92f1448cbabcdd92201edd855498f 353 Gene3D G3DSA:3.20.20.370 16 289 2.5E-27 T 15-10-2018 VIBNI_B1395 daa92f1448cbabcdd92201edd855498f 353 Pfam PF01522 Polysaccharide deacetylase 37 165 1.6E-18 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 SUPERFAMILY SSF51419 14 242 3.71E-42 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 PIRSF PIRSF038941 1 372 7.9E-126 T 15-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 SUPERFAMILY SSF50621 212 359 5.02E-23 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 Gene3D G3DSA:3.20.20.10 15 242 2.6E-142 T 15-10-2018 IPR029066 PLP-binding barrel VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 3.0E-5 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.6E-161 T 15-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VIBNI_A2070 d6fff4f6223c09f07f5ac27e35ecd2f4 376 Gene3D G3DSA:2.40.37.10 7 372 2.6E-142 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VIBNI_A1182 5d761f90e45226a2196fc521d6c4fba2 333 SUPERFAMILY SSF161098 94 322 2.22E-47 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1182 5d761f90e45226a2196fc521d6c4fba2 333 Gene3D G3DSA:1.10.3720.10 90 332 4.5E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1182 5d761f90e45226a2196fc521d6c4fba2 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 320 7.1E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1245 7fb8bd55699ddfd6f9db9f0cae699ca7 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 38 329 1.6E-31 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VIBNI_B1245 7fb8bd55699ddfd6f9db9f0cae699ca7 342 Gene3D G3DSA:3.40.50.2300 147 332 7.1E-112 T 15-10-2018 VIBNI_B1245 7fb8bd55699ddfd6f9db9f0cae699ca7 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 39 336 2.2E-134 T 15-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VIBNI_B1245 7fb8bd55699ddfd6f9db9f0cae699ca7 342 Gene3D G3DSA:3.40.50.2300 40 308 7.1E-112 T 15-10-2018 VIBNI_B1245 7fb8bd55699ddfd6f9db9f0cae699ca7 342 SUPERFAMILY SSF53822 39 302 7.07E-35 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 1.6E-38 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.0E-111 T 15-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 Gene3D G3DSA:3.30.70.420 146 261 1.6E-107 T 15-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 SUPERFAMILY SSF55035 146 261 5.1E-35 T 15-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 Gene3D G3DSA:3.90.770.10 92 405 1.6E-107 T 15-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 15-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B1293 adcd7ea89d345de3046db3e572a013ff 419 SUPERFAMILY SSF56542 29 409 2.75E-75 T 15-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 Gene3D G3DSA:1.10.150.240 16 95 4.6E-61 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 2.5E-23 T 15-10-2018 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 Gene3D G3DSA:3.40.50.1000 5 218 4.6E-61 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B0776 c648e36da8e745310f02f41259294089 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 189 2.3E-16 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 4.0E-73 T 15-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 195 3.2E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.4E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.4E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.4E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.4E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_B0776 c648e36da8e745310f02f41259294089 224 SUPERFAMILY SSF56784 2 222 2.03E-46 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Pfam PF04408 Helicase associated domain (HA2) 374 466 8.2E-7 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Pfam PF00270 DEAD/DEAH box helicase 15 152 2.9E-6 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 SUPERFAMILY SSF52540 16 327 5.06E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Gene3D G3DSA:1.20.120.1080 358 452 4.4E-6 T 15-10-2018 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Pfam PF00271 Helicase conserved C-terminal domain 201 315 1.4E-14 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 SMART SM00847 373 462 1.4E-4 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Gene3D G3DSA:3.40.50.300 2 163 2.1E-40 T 15-10-2018 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 SMART SM00490 220 316 8.7E-14 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 Gene3D G3DSA:3.40.50.300 170 331 1.4E-42 T 15-10-2018 VIBNI_A1147 12e94c75b50099278db3884bd5d9d510 779 SMART SM00487 2 175 1.5E-11 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A0576 8b48676bec2d412e4232455df39e0648 214 Gene3D G3DSA:3.30.1330.60 56 214 1.6E-35 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0576 8b48676bec2d412e4232455df39e0648 214 SUPERFAMILY SSF103088 86 208 5.36E-24 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A0576 8b48676bec2d412e4232455df39e0648 214 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 6 49 6.4E-16 T 15-10-2018 IPR025713 Motility protein B, N-terminal domain VIBNI_A0576 8b48676bec2d412e4232455df39e0648 214 Pfam PF00691 OmpA family 100 200 4.5E-15 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A1745 dafc46fa3fb332ae4b86c6731c237a5b 206 Gene3D G3DSA:1.10.760.10 46 206 1.4E-72 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A1745 dafc46fa3fb332ae4b86c6731c237a5b 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.0E-81 T 15-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VIBNI_A1745 dafc46fa3fb332ae4b86c6731c237a5b 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 4.3E-82 T 15-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VIBNI_A1745 dafc46fa3fb332ae4b86c6731c237a5b 206 SUPERFAMILY SSF46626 19 202 1.23E-28 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B1855 4de2a863d138fcbe465164f5d342123d 259 SUPERFAMILY SSF56317 2 243 2.35E-32 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_B1855 4de2a863d138fcbe465164f5d342123d 259 Gene3D G3DSA:3.60.110.10 2 255 9.8E-31 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_B1855 4de2a863d138fcbe465164f5d342123d 259 Pfam PF00795 Carbon-nitrogen hydrolase 7 168 4.1E-12 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VIBNI_A1436 4ba52b3d5095b2a55941bc6b765b1cf9 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 2.5E-205 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_A1436 4ba52b3d5095b2a55941bc6b765b1cf9 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.6E-188 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 Gene3D G3DSA:3.40.190.290 95 289 6.8E-9 T 15-10-2018 VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 SUPERFAMILY SSF46785 2 85 3.56E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 SUPERFAMILY SSF53850 90 288 4.71E-21 T 15-10-2018 VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.2E-15 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 Gene3D G3DSA:1.10.10.10 4 92 3.9E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0354 f65b2182137b24ea4995b449e62adb29 296 Pfam PF03466 LysR substrate binding domain 97 288 3.4E-10 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1589 6334850df9868449c5ddd8c0851558b2 257 Pfam PF14247 Putative metallopeptidase 29 251 1.5E-66 T 15-10-2018 IPR025644 Putative metallopeptidase VIBNI_A1225 ab3b893c685596349467f4a34d1b75ff 256 SMART SM00893 24 213 1.8E-19 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_A1225 ab3b893c685596349467f4a34d1b75ff 256 Gene3D G3DSA:3.40.50.620 2 255 3.9E-47 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A1225 ab3b893c685596349467f4a34d1b75ff 256 SUPERFAMILY SSF52402 2 251 3.72E-41 T 15-10-2018 VIBNI_A1225 ab3b893c685596349467f4a34d1b75ff 256 Pfam PF01012 Electron transfer flavoprotein domain 34 206 1.8E-26 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VIBNI_B0035 97dbec67d469cdb83173e5e036d8f64f 607 Pfam PF03781 Sulfatase-modifying factor enzyme 1 381 602 5.4E-48 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VIBNI_B0035 97dbec67d469cdb83173e5e036d8f64f 607 Gene3D G3DSA:3.90.1580.10 381 603 4.3E-54 T 15-10-2018 VIBNI_B0035 97dbec67d469cdb83173e5e036d8f64f 607 SUPERFAMILY SSF56436 382 604 4.94E-53 T 15-10-2018 IPR016187 C-type lectin fold VIBNI_B0035 97dbec67d469cdb83173e5e036d8f64f 607 Pfam PF08308 PEGA domain 295 359 1.1E-18 T 15-10-2018 IPR013229 PEGA VIBNI_B1600 f828160b6d2f8cc897b29dec38a24972 134 Pfam PF04892 VanZ like family 49 120 3.6E-9 T 15-10-2018 IPR006976 VanZ-like VIBNI_A2466 e820a1d9d19ca6199ed3396a31f2957b 352 PIRSF PIRSF039026 1 351 1.5E-115 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VIBNI_A2466 e820a1d9d19ca6199ed3396a31f2957b 352 Gene3D G3DSA:3.40.190.170 38 335 5.3E-107 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2466 e820a1d9d19ca6199ed3396a31f2957b 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 56 317 2.3E-39 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2466 e820a1d9d19ca6199ed3396a31f2957b 352 Gene3D G3DSA:3.40.190.10 151 321 5.3E-107 T 15-10-2018 VIBNI_B0193 54a532d5d4fc522c23c3ce1d94981149 290 SUPERFAMILY SSF55729 19 104 5.89E-6 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3316 b6be208ae60d417c4e67fed7dcfa0797 363 Pfam PF01595 Domain of unknown function DUF21 10 177 7.1E-30 T 15-10-2018 IPR002550 CNNM, transmembrane domain VIBNI_A3316 b6be208ae60d417c4e67fed7dcfa0797 363 SUPERFAMILY SSF54631 181 315 6.08E-24 T 15-10-2018 VIBNI_A3316 b6be208ae60d417c4e67fed7dcfa0797 363 Gene3D G3DSA:3.10.580.10 186 315 2.2E-39 T 15-10-2018 VIBNI_A3316 b6be208ae60d417c4e67fed7dcfa0797 363 Pfam PF00571 CBS domain 264 313 1.6E-5 T 15-10-2018 IPR000644 CBS domain VIBNI_B0911 512b09e4269eed80dda6a7904607c8d6 403 SUPERFAMILY SSF51695 63 398 2.88E-67 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B0911 512b09e4269eed80dda6a7904607c8d6 403 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 65 392 2.1E-24 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VIBNI_B0911 512b09e4269eed80dda6a7904607c8d6 403 Gene3D G3DSA:3.20.20.190 59 398 1.1E-41 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_A1859 110a57c235df6ecaae3f2c354ee09929 358 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 319 3.8E-42 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A1859 110a57c235df6ecaae3f2c354ee09929 358 PIRSF PIRSF039026 1 358 2.8E-123 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VIBNI_A1859 110a57c235df6ecaae3f2c354ee09929 358 Gene3D G3DSA:3.40.190.10 153 324 2.8E-111 T 15-10-2018 VIBNI_A1859 110a57c235df6ecaae3f2c354ee09929 358 Gene3D G3DSA:3.40.190.170 38 338 2.8E-111 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Gene3D G3DSA:3.30.230.10 542 767 5.8E-94 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 639 752 2.0E-9 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 SUPERFAMILY SSF52540 30 536 1.43E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Pfam PF13654 AAA domain 25 539 1.4E-182 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.2E-7 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.2E-7 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 2.2E-7 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Gene3D G3DSA:3.40.50.300 9 179 4.7E-28 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Gene3D G3DSA:3.40.50.300 230 449 9.4E-55 T 15-10-2018 VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 SUPERFAMILY SSF54211 564 757 2.54E-35 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VIBNI_B1946 26abd6dbfdbb4cfb3aa8fc3e18592a18 786 Gene3D G3DSA:1.10.8.60 450 536 4.9E-13 T 15-10-2018 VIBNI_B1456 f317641cdcfae8fe2ae32ef35c11f83a 289 SUPERFAMILY SSF52151 37 226 3.84E-47 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VIBNI_B1456 f317641cdcfae8fe2ae32ef35c11f83a 289 Gene3D G3DSA:3.40.1090.10 132 282 1.1E-11 T 15-10-2018 VIBNI_B1456 f317641cdcfae8fe2ae32ef35c11f83a 289 Gene3D G3DSA:3.40.1090.10 27 131 9.2E-25 T 15-10-2018 VIBNI_B1456 f317641cdcfae8fe2ae32ef35c11f83a 289 Pfam PF01734 Patatin-like phospholipase 42 196 2.5E-22 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VIBNI_B1264 ace848082abb7bbef7f4809cfd5800ed 206 Gene3D G3DSA:3.40.50.1000 1 189 5.0E-29 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1264 ace848082abb7bbef7f4809cfd5800ed 206 Gene3D G3DSA:1.10.150.240 15 88 5.0E-29 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VIBNI_B1264 ace848082abb7bbef7f4809cfd5800ed 206 SUPERFAMILY SSF56784 4 191 5.73E-22 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1264 ace848082abb7bbef7f4809cfd5800ed 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 60 182 2.0E-13 T 15-10-2018 VIBNI_B1264 ace848082abb7bbef7f4809cfd5800ed 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 51 182 7.6E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VIBNI_A0729 159d5b5f126631adf8ec73b85a91042b 164 Pfam PF03748 Flagellar basal body-associated protein FliL 63 164 3.9E-20 T 15-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 3.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 Gene3D G3DSA:3.40.800.20 2 302 3.5E-65 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 SUPERFAMILY SSF52768 3 286 1.34E-78 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily VIBNI_A0858 d1cb039afa405245936e3c345914470b 308 Pfam PF00850 Histone deacetylase domain 30 286 4.6E-51 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 4.8E-62 T 15-10-2018 VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 SUPERFAMILY SSF51735 10 246 1.32E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 Gene3D G3DSA:3.40.50.720 2 247 1.5E-72 T 15-10-2018 VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 191 0.0035 T 15-10-2018 VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A1286 c9a5568f5cd34c21d6b470a8068e7283 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.5E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_A0802 f8293b309c63d9d9db9041be9943f8cc 1993 Gene3D G3DSA:1.20.58.2200 1933 1990 1.3E-14 T 15-10-2018 IPR038440 FimV, C-terminal domain superfamily VIBNI_A0802 f8293b309c63d9d9db9041be9943f8cc 1993 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 67 139 5.9E-27 T 15-10-2018 IPR020012 Motility protein FimV, N-terminal VIBNI_A0802 f8293b309c63d9d9db9041be9943f8cc 1993 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1948 1990 1.1E-15 T 15-10-2018 IPR020011 Motility protein FimV, C-terminal VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 SUPERFAMILY SSF50129 1 143 1.05E-29 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 SMART SM00829 15 330 4.3E-7 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 Pfam PF16884 N-terminal domain of oxidoreductase 5 114 7.4E-31 T 15-10-2018 VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 Gene3D G3DSA:3.40.50.720 126 301 1.4E-115 T 15-10-2018 VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 Gene3D G3DSA:3.90.180.10 21 329 1.4E-115 T 15-10-2018 VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 SUPERFAMILY SSF51735 123 298 6.86E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0802 5b95e9225d931597489a18422cb16169 332 Pfam PF00107 Zinc-binding dehydrogenase 159 290 3.1E-25 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_B0068 39a8a8fa044aaa3e61889c2333fe1bbc 136 Pfam PF16233 Domain of unknown function (DUF4893) 26 81 2.3E-12 T 15-10-2018 IPR032609 Protein of unknown function DUF4893 VIBNI_A3664 10db3c58280a71225ee8ce78d3744df1 333 SUPERFAMILY SSF56059 122 309 3.12E-13 T 15-10-2018 VIBNI_A3664 10db3c58280a71225ee8ce78d3744df1 333 Gene3D G3DSA:3.30.470.20 102 263 3.5E-5 T 15-10-2018 VIBNI_A0688 3472988648b62719139cea18672180c1 358 Pfam PF01594 AI-2E family transporter 20 345 1.1E-74 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like VIBNI_A3201 6c38ae5bf5f0d7a70c70587ff1fc351a 198 Pfam PF01810 LysE type translocator 19 189 6.6E-16 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1614 87e6ff167b198a1ac4f7905b8a27a98a 297 Pfam PF00535 Glycosyl transferase family 2 4 164 2.2E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_B1614 87e6ff167b198a1ac4f7905b8a27a98a 297 Gene3D G3DSA:3.90.550.10 1 209 6.0E-36 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_B1614 87e6ff167b198a1ac4f7905b8a27a98a 297 SUPERFAMILY SSF53448 2 255 6.65E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A0005 9525f587b4a655f0e08acdf00fb091d7 144 SUPERFAMILY SSF49764 6 138 1.33E-23 T 15-10-2018 IPR008978 HSP20-like chaperone VIBNI_A0005 9525f587b4a655f0e08acdf00fb091d7 144 Pfam PF00011 Hsp20/alpha crystallin family 43 137 2.2E-20 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VIBNI_A0005 9525f587b4a655f0e08acdf00fb091d7 144 Gene3D G3DSA:2.60.40.790 34 137 3.9E-23 T 15-10-2018 IPR008978 HSP20-like chaperone VIBNI_A0715 1d6ce55ee38623b47d2da234a7bf9a87 624 Pfam PF07196 Flagellin hook IN motif 125 178 7.5E-8 T 15-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VIBNI_A0715 1d6ce55ee38623b47d2da234a7bf9a87 624 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 7.1E-22 T 15-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VIBNI_A0715 1d6ce55ee38623b47d2da234a7bf9a87 624 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 390 614 3.7E-49 T 15-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VIBNI_B0331 4af22acdca7e44ad4549578d93e059ec 316 Pfam PF13503 Domain of unknown function (DUF4123) 55 160 2.8E-11 T 15-10-2018 IPR025391 Domain of unknown function DUF4123 VIBNI_A2786 2d1fe27a8798b5489a69b28df9e339ec 127 SUPERFAMILY SSF82649 1 125 2.12E-48 T 15-10-2018 VIBNI_A2786 2d1fe27a8798b5489a69b28df9e339ec 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.7E-69 T 15-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VIBNI_A2786 2d1fe27a8798b5489a69b28df9e339ec 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.7E-56 T 15-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VIBNI_A2786 2d1fe27a8798b5489a69b28df9e339ec 127 Gene3D G3DSA:3.90.1010.10 1 127 6.8E-59 T 15-10-2018 VIBNI_A0876 23cd14beac5d9f96e12ec6135e4bc77f 372 Gene3D G3DSA:3.40.50.10330 77 185 2.1E-5 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VIBNI_A0876 23cd14beac5d9f96e12ec6135e4bc77f 372 PIRSF PIRSF018567 2 371 1.5E-98 T 15-10-2018 IPR011391 Acetoin catabolism kinase AcoX VIBNI_A0876 23cd14beac5d9f96e12ec6135e4bc77f 372 Pfam PF01513 ATP-NAD kinase 6 263 2.4E-18 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VIBNI_A0876 23cd14beac5d9f96e12ec6135e4bc77f 372 SUPERFAMILY SSF111331 106 175 3.92E-8 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 Pfam PF02016 LD-carboxypeptidase 15 319 2.7E-71 T 15-10-2018 IPR003507 Peptidase family S66 VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 SUPERFAMILY SSF141986 177 326 5.49E-39 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 PIRSF PIRSF028757 3 334 8.1E-90 T 15-10-2018 IPR003507 Peptidase family S66 VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 Gene3D G3DSA:3.50.30.60 168 335 3.0E-51 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 SUPERFAMILY SSF52317 2 164 1.6E-45 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1942 b93507670d3fa382fba022bc2f511c37 337 Gene3D G3DSA:3.40.50.10740 2 166 2.3E-60 T 15-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VIBNI_A0947 6dc5c9169e10c220a33d9906dba767fc 258 Gene3D G3DSA:3.90.226.10 1 258 6.5E-80 T 15-10-2018 VIBNI_A0947 6dc5c9169e10c220a33d9906dba767fc 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VIBNI_A0947 6dc5c9169e10c220a33d9906dba767fc 258 SUPERFAMILY SSF52096 1 258 1.91E-77 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VIBNI_A0947 6dc5c9169e10c220a33d9906dba767fc 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 9.5E-52 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VIBNI_A2381 91f9c254e2752507a445308edf78fdc9 144 Pfam PF03610 PTS system fructose IIA component 4 115 1.5E-25 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VIBNI_A2381 91f9c254e2752507a445308edf78fdc9 144 SUPERFAMILY SSF53062 1 129 2.75E-32 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VIBNI_A2381 91f9c254e2752507a445308edf78fdc9 144 Gene3D G3DSA:3.40.50.510 1 142 8.6E-34 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VIBNI_A2329 65e559bdc8d6a266149661a462a2516e 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 2.6E-119 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VIBNI_A2329 65e559bdc8d6a266149661a462a2516e 256 SUPERFAMILY SSF47240 11 255 2.71E-73 T 15-10-2018 IPR009078 Ferritin-like superfamily VIBNI_A2329 65e559bdc8d6a266149661a462a2516e 256 Gene3D G3DSA:1.20.1260.10 99 256 1.4E-54 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A2329 65e559bdc8d6a266149661a462a2516e 256 Gene3D G3DSA:1.20.1260.10 7 76 3.7E-16 T 15-10-2018 IPR012347 Ferritin-like VIBNI_A2329 65e559bdc8d6a266149661a462a2516e 256 PIRSF PIRSF020736 2 256 7.4E-92 T 15-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VIBNI_B1677 b6ba16f117666db64a643e1ca2c4966f 210 Pfam PF13460 NAD(P)H-binding 8 193 1.7E-31 T 15-10-2018 IPR016040 NAD(P)-binding domain VIBNI_B1677 b6ba16f117666db64a643e1ca2c4966f 210 Gene3D G3DSA:3.40.50.720 4 209 3.2E-34 T 15-10-2018 VIBNI_B1677 b6ba16f117666db64a643e1ca2c4966f 210 SUPERFAMILY SSF51735 1 206 1.54E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A1242 e934d8d515759f69df256eccaf9a5e90 382 Gene3D G3DSA:3.40.50.10540 4 379 1.6E-102 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A1242 e934d8d515759f69df256eccaf9a5e90 382 Gene3D G3DSA:3.30.1540.10 233 324 1.6E-102 T 15-10-2018 VIBNI_A1242 e934d8d515759f69df256eccaf9a5e90 382 SUPERFAMILY SSF89796 1 379 2.22E-104 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily VIBNI_A1242 e934d8d515759f69df256eccaf9a5e90 382 Pfam PF02515 CoA-transferase family III 5 372 4.3E-102 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 VIBNI_B1755 439f2f19bc4efb84d0fa02d91a0cac44 236 Gene3D G3DSA:3.40.50.1580 1 236 2.2E-75 T 15-10-2018 VIBNI_B1755 439f2f19bc4efb84d0fa02d91a0cac44 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.6 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VIBNI_B1755 439f2f19bc4efb84d0fa02d91a0cac44 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.4E-112 T 15-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VIBNI_B1755 439f2f19bc4efb84d0fa02d91a0cac44 236 SUPERFAMILY SSF53167 3 234 2.09E-91 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VIBNI_B1755 439f2f19bc4efb84d0fa02d91a0cac44 236 Pfam PF01048 Phosphorylase superfamily 17 214 2.0E-36 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VIBNI_A3419 f04e7e5b0c63e999e7f401ac6f48c373 117 Pfam PF04219 Protein of unknown function, DUF 12 99 2.1E-33 T 15-10-2018 IPR007335 Protein of unknown function DUF413 VIBNI_A3818 5416872803f7df1c88fb70f7f43eebe4 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 9.1E-221 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VIBNI_A3818 5416872803f7df1c88fb70f7f43eebe4 646 Pfam PF01964 Radical SAM ThiC family 144 592 1.2E-199 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VIBNI_A3818 5416872803f7df1c88fb70f7f43eebe4 646 Gene3D G3DSA:3.20.20.540 214 527 8.5E-155 T 15-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VIBNI_A3818 5416872803f7df1c88fb70f7f43eebe4 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 100.0 T 15-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VIBNI_A3818 5416872803f7df1c88fb70f7f43eebe4 646 Pfam PF13667 ThiC-associated domain 22 104 5.9E-34 T 15-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VIBNI_A0999 bfa12876ebba958ca9539baf96011e98 347 Pfam PF01032 FecCD transport family 22 337 1.7E-82 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0999 bfa12876ebba958ca9539baf96011e98 347 SUPERFAMILY SSF81345 7 337 4.58E-74 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A0999 bfa12876ebba958ca9539baf96011e98 347 Gene3D G3DSA:1.10.3470.10 8 342 4.8E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_A1728 bbc7926186427bf3a594cd51eafb8940 256 SUPERFAMILY SSF161098 8 254 4.02E-55 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1728 bbc7926186427bf3a594cd51eafb8940 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.2E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1728 bbc7926186427bf3a594cd51eafb8940 256 Gene3D G3DSA:1.10.3720.10 4 256 8.1E-48 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 SUPERFAMILY SSF52540 73 360 1.78E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 Gene3D G3DSA:3.40.50.300 214 431 6.8E-50 T 15-10-2018 VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 SMART SM00490 260 341 4.0E-31 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 Pfam PF00271 Helicase conserved C-terminal domain 235 341 6.3E-30 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.2E-47 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 SMART SM00487 20 223 7.3E-52 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_B1747 723ac6eb8c02cc98980dee1311b05c0c 445 Gene3D G3DSA:3.40.50.300 1 212 7.7E-72 T 15-10-2018 VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 SUPERFAMILY SSF56112 105 365 1.35E-55 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 Gene3D G3DSA:1.10.510.10 195 378 1.2E-33 T 15-10-2018 VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 SMART SM00220 108 374 1.4E-35 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 Pfam PF00069 Protein kinase domain 108 351 1.7E-41 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 Gene3D G3DSA:3.30.200.20 96 193 6.6E-26 T 15-10-2018 VIBNI_A1426 297bfa46f70188c946b1e64c0eac33a3 731 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 235 247 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VIBNI_A1759 b4e92a406839221b260d945b67bfaf01 361 Pfam PF07470 Glycosyl Hydrolase Family 88 23 355 3.9E-44 T 15-10-2018 IPR010905 Glycosyl hydrolase, family 88 VIBNI_A1759 b4e92a406839221b260d945b67bfaf01 361 Gene3D G3DSA:1.50.10.10 3 361 1.5E-53 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_A1759 b4e92a406839221b260d945b67bfaf01 361 SUPERFAMILY SSF48208 23 356 1.47E-30 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_A0215 acf190a360984cf7c1b5b075a45f89a9 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.377 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VIBNI_A0215 acf190a360984cf7c1b5b075a45f89a9 196 Pfam PF13580 SIS domain 9 144 2.1E-33 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_A0215 acf190a360984cf7c1b5b075a45f89a9 196 SUPERFAMILY SSF53697 1 191 4.85E-57 T 15-10-2018 VIBNI_A0215 acf190a360984cf7c1b5b075a45f89a9 196 Gene3D G3DSA:3.40.50.10490 1 196 1.9E-73 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 395 4.6E-9 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 4.6E-9 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 SUPERFAMILY SSF51395 2 358 2.51E-109 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 626 6.2E-23 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 SUPERFAMILY SSF51971 373 622 8.24E-39 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 Gene3D G3DSA:3.50.50.60 468 620 6.9E-107 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 327 8.1E-83 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 Gene3D G3DSA:3.40.50.720 374 661 6.9E-107 T 15-10-2018 VIBNI_A0847 f62a042adc540759bcb4c89ff02eaf20 667 Gene3D G3DSA:3.20.20.70 1 367 2.2E-122 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B1472 54ca6510b7b1f982831c933b5284717f 230 SUPERFAMILY SSF55166 24 229 1.02E-27 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_B1472 54ca6510b7b1f982831c933b5284717f 230 Pfam PF03411 Penicillin-insensitive murein endopeptidase 30 225 4.8E-9 T 15-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VIBNI_B1472 54ca6510b7b1f982831c933b5284717f 230 Gene3D G3DSA:3.30.1380.10 17 230 3.8E-15 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A0303 6b5a32e1f26b24226ec472f7dab3c993 404 SUPERFAMILY SSF53850 28 401 1.92E-60 T 15-10-2018 VIBNI_A0303 6b5a32e1f26b24226ec472f7dab3c993 404 Gene3D G3DSA:3.40.190.10 46 343 4.2E-66 T 15-10-2018 VIBNI_A0303 6b5a32e1f26b24226ec472f7dab3c993 404 Gene3D G3DSA:3.40.190.10 135 387 4.2E-66 T 15-10-2018 VIBNI_A0303 6b5a32e1f26b24226ec472f7dab3c993 404 Pfam PF13416 Bacterial extracellular solute-binding protein 48 326 9.4E-33 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A3875 dbf4c0032936674aae564f066f6ed901 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.8E-23 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VIBNI_A3875 dbf4c0032936674aae564f066f6ed901 143 Gene3D G3DSA:3.30.420.270 63 132 2.1E-14 T 15-10-2018 VIBNI_A1554 b0f4b7fbd7968502416e2ebf055466d1 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 5.7E-9 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 3.1E-126 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 Gene3D G3DSA:3.40.50.720 3 307 1.3E-115 T 15-10-2018 VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.138 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 SUPERFAMILY SSF51735 1 308 1.6E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 Gene3D G3DSA:3.90.25.10 173 295 1.3E-115 T 15-10-2018 VIBNI_A3684 6117c6562666f2e53d0c0806ce7ed304 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.0E-44 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A1958 a61b4073677e86700d3a044ceb1deb58 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 129 1.3E-8 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VIBNI_A1958 a61b4073677e86700d3a044ceb1deb58 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 146 186 2.8E-5 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VIBNI_A1958 a61b4073677e86700d3a044ceb1deb58 291 Gene3D G3DSA:3.30.479.10 11 152 1.5E-23 T 15-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VIBNI_A1958 a61b4073677e86700d3a044ceb1deb58 291 SUPERFAMILY SSF55620 3 154 1.06E-26 T 15-10-2018 VIBNI_A1958 a61b4073677e86700d3a044ceb1deb58 291 SUPERFAMILY SSF55620 146 289 1.56E-23 T 15-10-2018 VIBNI_B1208 ecf1cfae17727e9a2cab28e57a65b1a9 385 Gene3D G3DSA:3.40.50.1820 68 289 5.0E-29 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1208 ecf1cfae17727e9a2cab28e57a65b1a9 385 Pfam PF12146 Serine aminopeptidase, S33 81 271 5.5E-14 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 VIBNI_B1208 ecf1cfae17727e9a2cab28e57a65b1a9 385 SUPERFAMILY SSF53474 77 284 1.54E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1113 cd8e2b038a8fb21d9270d6e19f4a0456 426 Gene3D G3DSA:3.40.190.10 133 249 1.1E-21 T 15-10-2018 VIBNI_B1113 cd8e2b038a8fb21d9270d6e19f4a0456 426 SUPERFAMILY SSF53850 30 302 7.14E-28 T 15-10-2018 VIBNI_B1113 cd8e2b038a8fb21d9270d6e19f4a0456 426 Gene3D G3DSA:3.40.190.10 42 299 1.1E-21 T 15-10-2018 VIBNI_B1113 cd8e2b038a8fb21d9270d6e19f4a0456 426 Pfam PF13343 Bacterial extracellular solute-binding protein 81 302 7.0E-13 T 15-10-2018 VIBNI_A0652 105eed948ad7e4769b46d5d2460a6d96 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 8.1E-73 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VIBNI_A0652 105eed948ad7e4769b46d5d2460a6d96 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.9 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VIBNI_A0652 105eed948ad7e4769b46d5d2460a6d96 149 Pfam PF03477 ATP cone domain 50 136 9.9E-17 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 Pfam PF13237 4Fe-4S dicluster domain 274 348 2.8E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 Pfam PF02754 Cysteine-rich domain 427 496 0.0035 T 15-10-2018 IPR004017 Cysteine-rich domain VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 Pfam PF02754 Cysteine-rich domain 540 622 1.8E-10 T 15-10-2018 IPR004017 Cysteine-rich domain VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 Gene3D G3DSA:1.10.1060.10 253 373 1.4E-10 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 SUPERFAMILY SSF103501 1 245 1.96E-14 T 15-10-2018 IPR036197 NarG-like superfamily VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 337 348 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 SUPERFAMILY SSF46548 267 366 4.88E-20 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VIBNI_A1227 72aa7a81648e4f41f5a2068249ad3546 662 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 279 290 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A3197 9f92c99a53f7c32a6f4a646b623c4301 194 SUPERFAMILY SSF52218 12 183 7.33E-46 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3197 9f92c99a53f7c32a6f4a646b623c4301 194 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 189 48.218 T 15-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VIBNI_A3197 9f92c99a53f7c32a6f4a646b623c4301 194 Pfam PF02525 Flavodoxin-like fold 13 178 2.1E-42 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_A3197 9f92c99a53f7c32a6f4a646b623c4301 194 Gene3D G3DSA:3.40.50.360 12 186 1.2E-53 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3833 0c0101da723364767413e46c5a37753f 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.988 T 15-10-2018 IPR007456 Smg VIBNI_A3833 0c0101da723364767413e46c5a37753f 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 9.0E-61 T 15-10-2018 IPR007456 Smg VIBNI_A1797 2d093f2ed9d5568007018ba82a86e891 879 Pfam PF02470 MlaD protein 749 813 5.0E-6 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_A1797 2d093f2ed9d5568007018ba82a86e891 879 Pfam PF02470 MlaD protein 402 462 6.1E-8 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_A1797 2d093f2ed9d5568007018ba82a86e891 879 Pfam PF02470 MlaD protein 286 377 1.4E-8 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_A1797 2d093f2ed9d5568007018ba82a86e891 879 Pfam PF02470 MlaD protein 641 729 1.6E-7 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_A1797 2d093f2ed9d5568007018ba82a86e891 879 Pfam PF02470 MlaD protein 47 138 9.4E-12 T 15-10-2018 IPR003399 Mce/MlaD VIBNI_B0313 5fcd3b262387355c97847bc48d914b00 630 SUPERFAMILY SSF55874 507 622 1.7E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0313 5fcd3b262387355c97847bc48d914b00 630 Gene3D G3DSA:3.30.565.10 504 630 4.7E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0313 5fcd3b262387355c97847bc48d914b00 630 Pfam PF07695 7TM diverse intracellular signalling 208 393 2.5E-7 T 15-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 VIBNI_B0313 5fcd3b262387355c97847bc48d914b00 630 Pfam PF14501 GHKL domain 540 620 2.9E-6 T 15-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VIBNI_A0575 9ffbc751176e4f1d3b0bdaf64daafe9b 1307 Pfam PF05170 AsmA family 17 204 9.1E-17 T 15-10-2018 IPR007844 AsmA VIBNI_A0575 9ffbc751176e4f1d3b0bdaf64daafe9b 1307 Pfam PF05170 AsmA family 946 1203 3.9E-9 T 15-10-2018 IPR007844 AsmA VIBNI_B1557 b962b09bd8bb667377afb9c681f9b376 299 SUPERFAMILY SSF52540 3 218 2.91E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1557 b962b09bd8bb667377afb9c681f9b376 299 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1557 b962b09bd8bb667377afb9c681f9b376 299 SMART SM00382 29 212 1.7E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1557 b962b09bd8bb667377afb9c681f9b376 299 Gene3D G3DSA:3.40.50.300 1 225 2.7E-63 T 15-10-2018 VIBNI_B1557 b962b09bd8bb667377afb9c681f9b376 299 Pfam PF00005 ABC transporter 21 155 3.6E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1151 3ec8fd6e1421ed9a81f6dc34b62cd0ae 230 SUPERFAMILY SSF56214 23 106 3.01E-15 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A1151 3ec8fd6e1421ed9a81f6dc34b62cd0ae 230 SUPERFAMILY SSF56214 114 180 1.24E-11 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A1151 3ec8fd6e1421ed9a81f6dc34b62cd0ae 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 115 177 2.4E-7 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A1151 3ec8fd6e1421ed9a81f6dc34b62cd0ae 230 Gene3D G3DSA:3.90.470.20 23 133 9.3E-19 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VIBNI_A0700 029369154bf6bfe8aabcc57454c42859 113 Pfam PF13698 Domain of unknown function (DUF4156) 27 112 1.4E-21 T 15-10-2018 IPR025294 Protein of unknown function DUF4156 VIBNI_B2052 81016d2254bc29d2836a59fc94ca0e9f 205 Gene3D G3DSA:3.40.30.10 17 199 3.5E-27 T 15-10-2018 VIBNI_B2052 81016d2254bc29d2836a59fc94ca0e9f 205 Pfam PF13462 Thioredoxin 39 194 2.6E-11 T 15-10-2018 IPR012336 Thioredoxin-like fold VIBNI_B2052 81016d2254bc29d2836a59fc94ca0e9f 205 SUPERFAMILY SSF52833 21 196 1.53E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B2052 81016d2254bc29d2836a59fc94ca0e9f 205 PIRSF PIRSF001488 1 203 2.5E-25 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 SMART SM00347 30 130 2.1E-18 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.7E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.7E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 2.7E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 SUPERFAMILY SSF46785 6 142 7.14E-31 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 Gene3D G3DSA:1.10.10.10 3 145 4.8E-37 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0477 9908a73b9a50a8e6dc1b586fde5c36ea 155 Pfam PF12802 MarR family 36 94 8.6E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B2072 be816d8f4857414c91d9cae5f053625b 96 SUPERFAMILY SSF54909 12 85 5.37E-20 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B2072 be816d8f4857414c91d9cae5f053625b 96 Gene3D G3DSA:3.30.70.100 1 93 1.5E-24 T 15-10-2018 VIBNI_B2072 be816d8f4857414c91d9cae5f053625b 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 19 79 6.9E-13 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VIBNI_B1227 a6d26bc687b28a450d3143def60db9a5 333 SUPERFAMILY SSF52540 13 200 2.43E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1227 a6d26bc687b28a450d3143def60db9a5 333 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 186 2.6E-39 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VIBNI_B1227 a6d26bc687b28a450d3143def60db9a5 333 Gene3D G3DSA:3.40.50.300 10 210 6.6E-47 T 15-10-2018 VIBNI_A1079 d3c7ec1c0fd31c609915a23f688d95a0 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.369 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VIBNI_A1079 d3c7ec1c0fd31c609915a23f688d95a0 335 SUPERFAMILY SSF52540 50 194 1.13E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1079 d3c7ec1c0fd31c609915a23f688d95a0 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 327 3.3E-93 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VIBNI_A1079 d3c7ec1c0fd31c609915a23f688d95a0 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 1.0E-111 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VIBNI_B0740 6a372f589aa983762c47e34647dde185 365 Pfam PF11958 Domain of unknown function (DUF3472) 86 221 5.0E-8 T 15-10-2018 IPR021862 Protein of unknown function DUF3472 VIBNI_B0740 6a372f589aa983762c47e34647dde185 365 Pfam PF00652 Ricin-type beta-trefoil lectin domain 244 342 6.3E-10 T 15-10-2018 IPR000772 Ricin B, lectin domain VIBNI_B0740 6a372f589aa983762c47e34647dde185 365 Gene3D G3DSA:2.80.10.50 239 365 1.1E-10 T 15-10-2018 VIBNI_B0740 6a372f589aa983762c47e34647dde185 365 SUPERFAMILY SSF50370 242 362 1.44E-12 T 15-10-2018 IPR035992 Ricin B-like lectins VIBNI_A1931 0ce9fd4d10aa48bc501860ebafc3e2ac 440 PIRSF PIRSF006066 17 439 2.0E-112 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1931 0ce9fd4d10aa48bc501860ebafc3e2ac 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 23 432 2.1E-91 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A1931 0ce9fd4d10aa48bc501860ebafc3e2ac 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 34 436 2.6E-102 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B1733 6810a0c27ef50124bae6529eda6b0cc5 414 Gene3D G3DSA:3.40.190.10 48 339 5.3E-75 T 15-10-2018 VIBNI_B1733 6810a0c27ef50124bae6529eda6b0cc5 414 Gene3D G3DSA:3.40.190.10 137 400 5.3E-75 T 15-10-2018 VIBNI_B1733 6810a0c27ef50124bae6529eda6b0cc5 414 SUPERFAMILY SSF53850 33 410 2.57E-59 T 15-10-2018 VIBNI_B1733 6810a0c27ef50124bae6529eda6b0cc5 414 Pfam PF13416 Bacterial extracellular solute-binding protein 45 345 5.9E-37 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A1424 d9f7530c89b04979ef5be9d664526616 404 Gene3D G3DSA:1.20.1280.120 60 344 2.8E-29 T 15-10-2018 VIBNI_A1424 d9f7530c89b04979ef5be9d664526616 404 Pfam PF00199 Catalase 64 161 6.4E-9 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_A1424 d9f7530c89b04979ef5be9d664526616 404 SUPERFAMILY SSF56634 53 354 1.31E-60 T 15-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VIBNI_A1424 d9f7530c89b04979ef5be9d664526616 404 Gene3D G3DSA:2.40.180.20 70 333 2.8E-29 T 15-10-2018 VIBNI_B0017 2e0380d9564b19c537cf1ec45e52de91 99 SUPERFAMILY SSF52091 9 98 4.91E-20 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0017 2e0380d9564b19c537cf1ec45e52de91 99 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 98 3.1E-16 T 15-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 VIBNI_B0017 2e0380d9564b19c537cf1ec45e52de91 99 Gene3D G3DSA:3.30.750.24 1 99 1.4E-19 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0017 2e0380d9564b19c537cf1ec45e52de91 99 Pfam PF01740 STAS domain 20 96 1.2E-9 T 15-10-2018 IPR002645 STAS domain VIBNI_B0442 ad3ce293cf9970c561aee8106110861e 395 Gene3D G3DSA:3.40.50.2300 35 301 3.4E-70 T 15-10-2018 VIBNI_B0442 ad3ce293cf9970c561aee8106110861e 395 Pfam PF13407 Periplasmic binding protein domain 35 289 6.2E-43 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0442 ad3ce293cf9970c561aee8106110861e 395 Gene3D G3DSA:3.40.50.2300 140 312 3.4E-70 T 15-10-2018 VIBNI_B0442 ad3ce293cf9970c561aee8106110861e 395 SUPERFAMILY SSF53822 29 312 1.01E-57 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2664 64216f8583d90586a61e754e699174f0 193 Pfam PF01713 Smr domain 95 175 6.0E-21 T 15-10-2018 IPR002625 Smr domain VIBNI_A2664 64216f8583d90586a61e754e699174f0 193 SUPERFAMILY SSF160443 93 175 8.11E-15 T 15-10-2018 IPR036063 Smr domain superfamily VIBNI_A2664 64216f8583d90586a61e754e699174f0 193 SMART SM00463 92 175 4.0E-16 T 15-10-2018 IPR002625 Smr domain VIBNI_A2664 64216f8583d90586a61e754e699174f0 193 Gene3D G3DSA:3.30.1370.110 48 181 5.6E-43 T 15-10-2018 VIBNI_A2678 4aac425499de7d0c543093ab350fa073 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 2.1E-41 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VIBNI_A2678 4aac425499de7d0c543093ab350fa073 127 PIRSF PIRSF005610 1 121 1.3E-20 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.3E-79 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 SUPERFAMILY SSF53328 2 201 7.72E-67 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 Gene3D G3DSA:3.40.50.170 2 212 4.3E-87 T 15-10-2018 VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.533 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 Pfam PF00551 Formyl transferase 2 181 2.3E-65 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_A2471 e6cd2add53aff33acef0040b0a69b137 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VIBNI_B1361 a228e6735159d78e73158518c1b5fa91 193 Pfam PF13489 Methyltransferase domain 25 145 6.0E-13 T 15-10-2018 VIBNI_B1361 a228e6735159d78e73158518c1b5fa91 193 SUPERFAMILY SSF53335 4 193 6.75E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B1361 a228e6735159d78e73158518c1b5fa91 193 Gene3D G3DSA:3.40.50.150 1 178 4.9E-26 T 15-10-2018 VIBNI_B2095 3915e8618425054ef0e1f86ff45bca4e 383 Gene3D G3DSA:2.160.20.160 105 262 2.3E-8 T 15-10-2018 VIBNI_B0338 9dcea539c67312263ceb4ec28cb49a02 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 3.6E-212 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_B0338 9dcea539c67312263ceb4ec28cb49a02 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 1.4E-178 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Gene3D G3DSA:3.40.50.300 277 529 2.8E-80 T 15-10-2018 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Gene3D G3DSA:3.40.50.300 3 276 7.4E-83 T 15-10-2018 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Pfam PF00005 ABC transporter 303 453 1.6E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 SUPERFAMILY SSF52540 5 255 6.12E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Pfam PF00005 ABC transporter 26 184 2.8E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 526 0.0098 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 262 3.4E-6 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 SUPERFAMILY SSF52540 275 524 7.21E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 SMART SM00382 311 502 1.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1357 b5f9e7e3474f9096437be5964b6c23ce 530 SMART SM00382 34 234 1.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1932 88805a3be343956701a6aed9f65bffd2 187 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 98 5.8E-8 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B1932 88805a3be343956701a6aed9f65bffd2 187 SUPERFAMILY SSF50475 8 111 5.46E-12 T 15-10-2018 VIBNI_B1932 88805a3be343956701a6aed9f65bffd2 187 Gene3D G3DSA:2.30.110.10 2 127 3.6E-20 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_B1042 f6b2d0c710f516f9a767a7031590db21 234 Pfam PF08808 RES domain 70 207 4.2E-24 T 15-10-2018 IPR014914 RES domain VIBNI_B1042 f6b2d0c710f516f9a767a7031590db21 234 SMART SM00953 79 208 1.9E-18 T 15-10-2018 IPR014914 RES domain VIBNI_B1972 54818af1970d85ae9054208dbb11b42f 1134 Pfam PF00589 Phage integrase family 875 971 2.4E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_B1972 54818af1970d85ae9054208dbb11b42f 1134 SUPERFAMILY SSF56349 795 969 2.06E-11 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_B1972 54818af1970d85ae9054208dbb11b42f 1134 Gene3D G3DSA:1.10.443.10 798 988 3.7E-10 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A0335 54818af1970d85ae9054208dbb11b42f 1134 Pfam PF00589 Phage integrase family 875 971 2.4E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A0335 54818af1970d85ae9054208dbb11b42f 1134 SUPERFAMILY SSF56349 795 969 2.06E-11 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A0335 54818af1970d85ae9054208dbb11b42f 1134 Gene3D G3DSA:1.10.443.10 798 988 3.7E-10 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_A0275 797c6261ddd4e26b8e7dce08e6f6c394 145 Pfam PF07386 Protein of unknown function (DUF1499) 31 134 1.6E-23 T 15-10-2018 IPR010865 Protein of unknown function DUF1499 VIBNI_A0275 797c6261ddd4e26b8e7dce08e6f6c394 145 PIRSF PIRSF026426 1 143 4.6E-43 T 15-10-2018 IPR010865 Protein of unknown function DUF1499 VIBNI_B2106 3feb6ab91f97bba3a2889802ddc9dcfe 329 SUPERFAMILY SSF51430 1 321 7.73E-92 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_B2106 3feb6ab91f97bba3a2889802ddc9dcfe 329 Pfam PF00248 Aldo/keto reductase family 16 317 3.3E-68 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain VIBNI_B2106 3feb6ab91f97bba3a2889802ddc9dcfe 329 Gene3D G3DSA:3.20.20.100 1 328 5.2E-105 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 Gene3D G3DSA:1.10.10.10 7 82 1.0E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 79 2.0E-11 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 Pfam PF01380 SIS domain 139 244 6.3E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 SUPERFAMILY SSF53697 127 275 7.72E-27 T 15-10-2018 VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 Gene3D G3DSA:3.40.50.10490 116 282 6.8E-30 T 15-10-2018 VIBNI_B1539 80c5b3a5b1df488119dd5437f63d4d23 301 SUPERFAMILY SSF46689 14 79 1.59E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0934 0f524edd5835374ca58075ab8dc2e06a 105 Gene3D G3DSA:1.10.3340.10 4 105 8.2E-46 T 15-10-2018 IPR036810 SMc04008-like superfamily VIBNI_A0934 0f524edd5835374ca58075ab8dc2e06a 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 2.6E-36 T 15-10-2018 IPR023163 SMc04008-like domain VIBNI_A0934 0f524edd5835374ca58075ab8dc2e06a 105 SUPERFAMILY SSF158757 8 85 8.76E-37 T 15-10-2018 IPR036810 SMc04008-like superfamily VIBNI_B1312 72fd0bde9ed5b4189010b27b42590164 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 1.2E-41 T 15-10-2018 IPR007458 Protein of unknown function DUF496 VIBNI_B1312 72fd0bde9ed5b4189010b27b42590164 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.742 T 15-10-2018 IPR007458 Protein of unknown function DUF496 VIBNI_B1312 72fd0bde9ed5b4189010b27b42590164 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-41 T 15-10-2018 IPR007458 Protein of unknown function DUF496 VIBNI_B1312 72fd0bde9ed5b4189010b27b42590164 104 PIRSF PIRSF028773 1 104 6.3E-46 T 15-10-2018 IPR007458 Protein of unknown function DUF496 VIBNI_B1704 b4bfebd930cc363d9c6b9ec2bf15fe65 387 SUPERFAMILY SSF161098 170 363 3.4E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1704 b4bfebd930cc363d9c6b9ec2bf15fe65 387 Gene3D G3DSA:1.10.3720.10 163 378 4.3E-22 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1704 b4bfebd930cc363d9c6b9ec2bf15fe65 387 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 9.1E-10 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_B1704 b4bfebd930cc363d9c6b9ec2bf15fe65 387 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 193 380 3.5E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 SUPERFAMILY SSF52540 7 251 6.12E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 Gene3D G3DSA:3.40.50.300 4 255 1.3E-75 T 15-10-2018 VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 PIRSF PIRSF039085 3 256 6.1E-119 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 SMART SM00382 31 229 6.9E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1099 756ae6a9ed1e0403af7b4ef6ab9cc5a6 256 Pfam PF00005 ABC transporter 22 181 2.9E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1409 f7c8af5f400c2dc6c74b94616953d6da 305 Gene3D G3DSA:3.40.630.10 4 305 2.9E-113 T 15-10-2018 VIBNI_B1409 f7c8af5f400c2dc6c74b94616953d6da 305 Pfam PF00246 Zinc carboxypeptidase 73 146 3.2E-6 T 15-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VIBNI_B1409 f7c8af5f400c2dc6c74b94616953d6da 305 SUPERFAMILY SSF53187 36 289 1.32E-36 T 15-10-2018 VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 SMART SM00382 28 220 3.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 SUPERFAMILY SSF52540 4 236 3.31E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 Gene3D G3DSA:3.40.50.300 4 246 2.4E-62 T 15-10-2018 VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 4.6E-125 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VIBNI_B0215 8f3331e9eb73a0824a93485cee392704 249 Pfam PF00005 ABC transporter 19 174 2.7E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2152 28900b404055009dcf5e195826d38f71 154 Pfam PF13302 Acetyltransferase (GNAT) domain 5 133 5.6E-21 T 15-10-2018 IPR000182 GNAT domain VIBNI_B2152 28900b404055009dcf5e195826d38f71 154 Gene3D G3DSA:3.40.630.30 2 154 1.2E-26 T 15-10-2018 VIBNI_B2152 28900b404055009dcf5e195826d38f71 154 SUPERFAMILY SSF55729 4 136 4.77E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0537 7fe9e245c0bf9c374ad0d331e45559eb 285 SUPERFAMILY SSF53955 58 266 3.52E-22 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A0620 8ad0ec871ed3dcdd42ab450080204fc8 107 SUPERFAMILY SSF54285 6 82 1.63E-24 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VIBNI_A0620 8ad0ec871ed3dcdd42ab450080204fc8 107 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 23.981 T 15-10-2018 IPR005346 RnfH protein VIBNI_A0620 8ad0ec871ed3dcdd42ab450080204fc8 107 Gene3D G3DSA:3.10.20.280 2 92 1.4E-32 T 15-10-2018 IPR037021 RnfH superfamily VIBNI_A0620 8ad0ec871ed3dcdd42ab450080204fc8 107 Pfam PF03658 RnfH family Ubiquitin 8 90 1.0E-32 T 15-10-2018 IPR005346 RnfH protein VIBNI_B1367 a06a56a965868b4d7fb21531ff7b251d 654 Gene3D G3DSA:3.30.1330.60 521 649 1.5E-9 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B1367 a06a56a965868b4d7fb21531ff7b251d 654 SUPERFAMILY SSF103088 582 631 1.09E-10 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_B1367 a06a56a965868b4d7fb21531ff7b251d 654 Pfam PF00691 OmpA family 569 627 3.9E-9 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_B1667 f92647c7590ec9ce615a67e66f221532 146 Pfam PF13508 Acetyltransferase (GNAT) domain 56 125 2.4E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1667 f92647c7590ec9ce615a67e66f221532 146 Gene3D G3DSA:3.40.630.30 4 138 4.2E-21 T 15-10-2018 VIBNI_B1667 f92647c7590ec9ce615a67e66f221532 146 SUPERFAMILY SSF55729 1 142 1.25E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2109 5a48863fb9e32e1e30d8fcbda12cd7d1 263 Pfam PF02698 DUF218 domain 80 242 6.9E-26 T 15-10-2018 IPR003848 Domain of unknown function DUF218 VIBNI_A1539 124ee409b0dce30013e0273318b59fbe 200 Gene3D G3DSA:3.40.630.30 3 198 1.5E-41 T 15-10-2018 VIBNI_A1539 124ee409b0dce30013e0273318b59fbe 200 SUPERFAMILY SSF55729 16 181 1.95E-35 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1539 124ee409b0dce30013e0273318b59fbe 200 Pfam PF13302 Acetyltransferase (GNAT) domain 18 156 1.6E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1149 f9f4ef8e78a44a0bf93229d641cc480b 122 Pfam PF10719 Late competence development protein ComFB 8 84 2.5E-14 T 15-10-2018 IPR019657 Late competence development protein ComFB VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 50 198 1.9E-24 T 15-10-2018 VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 SUPERFAMILY SSF55486 22 249 4.55E-16 T 15-10-2018 VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 Gene3D G3DSA:2.60.120.260 295 413 4.6E-7 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 SUPERFAMILY SSF49785 307 414 7.23E-15 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 Pfam PF01483 Proprotein convertase P-domain 335 414 4.4E-16 T 15-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VIBNI_B0105 a0b08617962ebf5d0d2d054d51f9bb99 415 Gene3D G3DSA:3.40.390.10 17 251 3.4E-9 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_A0926 367b97801356cae53eb3d6cb3d6414ef 300 Gene3D G3DSA:1.10.3720.10 96 296 1.5E-20 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0926 367b97801356cae53eb3d6cb3d6414ef 300 SUPERFAMILY SSF161098 97 281 6.93E-27 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0926 367b97801356cae53eb3d6cb3d6414ef 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.1E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0926 367b97801356cae53eb3d6cb3d6414ef 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 1.3E-14 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VIBNI_A0610 7737464224c9968bccb8b313c3f7ce5b 287 Pfam PF00753 Metallo-beta-lactamase superfamily 39 117 7.1E-8 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0610 7737464224c9968bccb8b313c3f7ce5b 287 Gene3D G3DSA:3.60.15.10 8 285 5.0E-43 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A0610 7737464224c9968bccb8b313c3f7ce5b 287 SMART SM00849 34 272 1.6E-5 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A0610 7737464224c9968bccb8b313c3f7ce5b 287 SUPERFAMILY SSF56281 30 276 5.82E-23 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1192 e9bc3e6545ba651d8a15e2112f48d343 179 SUPERFAMILY SSF81342 3 175 3.37E-38 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VIBNI_B1192 e9bc3e6545ba651d8a15e2112f48d343 179 Pfam PF01292 Prokaryotic cytochrome b561 7 176 1.8E-30 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VIBNI_B1192 e9bc3e6545ba651d8a15e2112f48d343 179 Gene3D G3DSA:1.20.950.20 2 85 3.1E-7 T 15-10-2018 VIBNI_A1845 4e45beba573022c1ecb23a22c9396d69 320 Gene3D G3DSA:3.40.50.2300 133 312 1.2E-8 T 15-10-2018 VIBNI_A1845 4e45beba573022c1ecb23a22c9396d69 320 Gene3D G3DSA:3.40.50.2300 67 291 1.2E-8 T 15-10-2018 VIBNI_A1721 1f7932a514032cc662a668705987c1be 138 SUPERFAMILY SSF54975 4 132 5.89E-35 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VIBNI_A1721 1f7932a514032cc662a668705987c1be 138 Pfam PF04940 Sensors of blue-light using FAD 4 94 6.7E-29 T 15-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VIBNI_A1721 1f7932a514032cc662a668705987c1be 138 SMART SM01034 3 95 6.1E-36 T 15-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VIBNI_A1721 1f7932a514032cc662a668705987c1be 138 Gene3D G3DSA:3.30.70.100 2 136 5.8E-35 T 15-10-2018 VIBNI_B0743 056ef3970c1a5d5f58209f4944adc0ad 202 SUPERFAMILY SSF51206 18 160 1.57E-13 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_B0743 056ef3970c1a5d5f58209f4944adc0ad 202 Gene3D G3DSA:2.60.120.10 8 159 4.8E-36 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B2079 018b3548acc2b3b385da53740103d394 383 Pfam PF04235 Protein of unknown function (DUF418) 216 366 1.8E-26 T 15-10-2018 IPR007349 Domain of unknown function DUF418 VIBNI_B0707 ddd8941407b7c37bcc6fcb9d50a8114b 346 SMART SM00267 173 345 1.3E-55 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0707 ddd8941407b7c37bcc6fcb9d50a8114b 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 341 5.0E-45 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0707 ddd8941407b7c37bcc6fcb9d50a8114b 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 344 1.7E-51 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0707 ddd8941407b7c37bcc6fcb9d50a8114b 346 Gene3D G3DSA:3.30.70.270 177 345 1.3E-53 T 15-10-2018 VIBNI_B0707 ddd8941407b7c37bcc6fcb9d50a8114b 346 SUPERFAMILY SSF55073 189 344 1.73E-45 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_A2971 9f10fed70d6142dbed01f274769de85c 159 Pfam PF06271 RDD family 10 149 1.5E-20 T 15-10-2018 IPR010432 RDD VIBNI_A3144 391e93c86b45ae6238afbda167731295 182 Gene3D G3DSA:1.20.120.450 23 168 1.7E-5 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VIBNI_A3144 391e93c86b45ae6238afbda167731295 182 SUPERFAMILY SSF109854 27 163 3.89E-8 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 SUPERFAMILY SSF46626 39 186 1.61E-41 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 Gene3D G3DSA:1.10.760.10 53 198 4.4E-96 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 SUPERFAMILY SSF46626 185 324 2.29E-34 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 Pfam PF03150 Di-haem cytochrome c peroxidase 53 198 8.5E-43 T 15-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 PIRSF PIRSF000294 5 334 3.0E-83 T 15-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VIBNI_A2091 5762ed77381d4ae4d8a1cd964486f556 334 Gene3D G3DSA:1.10.760.10 51 323 4.4E-96 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2277 0bc69fe2ffc9ebf6abd216dd3c3ad203 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 256 499 1.9E-108 T 15-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VIBNI_A2277 0bc69fe2ffc9ebf6abd216dd3c3ad203 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 1.2E-55 T 15-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VIBNI_A1053 638ea94279e5e649fd9232e491581ffd 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 462 8.8E-49 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VIBNI_A1053 638ea94279e5e649fd9232e491581ffd 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 461 4.7E-78 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VIBNI_A1053 638ea94279e5e649fd9232e491581ffd 472 PIRSF PIRSF002457 1 469 9.0E-113 T 15-10-2018 IPR030676 Citrate carrier CitT-related VIBNI_B1726 4817acd833300516ff928da6a8382105 551 SUPERFAMILY SSF161098 294 543 6.73E-49 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1726 4817acd833300516ff928da6a8382105 551 Gene3D G3DSA:1.10.3720.10 10 281 8.8E-64 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1726 4817acd833300516ff928da6a8382105 551 Gene3D G3DSA:1.10.3720.10 294 547 1.2E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1726 4817acd833300516ff928da6a8382105 551 SUPERFAMILY SSF161098 12 280 2.9E-54 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1726 4817acd833300516ff928da6a8382105 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 365 536 2.4E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1726 4817acd833300516ff928da6a8382105 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 270 3.9E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 Pfam PF12697 Alpha/beta hydrolase family 16 245 6.3E-22 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 2.4E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 2.4E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 2.4E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 2.4E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 SUPERFAMILY SSF53474 5 253 3.03E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2574 28c9471b321714af52a97407a9fad10f 255 Gene3D G3DSA:3.40.50.1820 5 254 2.5E-68 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1820 87ca8490d9a6b734469ac724e1d33b07 270 SUPERFAMILY SSF46689 210 258 2.2E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1820 87ca8490d9a6b734469ac724e1d33b07 270 Gene3D G3DSA:1.10.10.60 154 258 2.1E-19 T 15-10-2018 VIBNI_B1820 87ca8490d9a6b734469ac724e1d33b07 270 Pfam PF12833 Helix-turn-helix domain 188 257 3.9E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1820 87ca8490d9a6b734469ac724e1d33b07 270 SMART SM00342 174 257 7.6E-13 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1876 fa6d119fb90bbe2866c325c7deaf20a4 245 Pfam PF12833 Helix-turn-helix domain 161 235 6.9E-16 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1876 fa6d119fb90bbe2866c325c7deaf20a4 245 SUPERFAMILY SSF46689 189 235 8.96E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1876 fa6d119fb90bbe2866c325c7deaf20a4 245 SMART SM00342 151 236 9.2E-5 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1876 fa6d119fb90bbe2866c325c7deaf20a4 245 Gene3D G3DSA:1.10.10.60 144 242 5.7E-16 T 15-10-2018 VIBNI_B1672 1cbb6327d5ff8df4e8eeddd819d374b3 247 Pfam PF07070 SpoOM protein 4 215 1.7E-62 T 15-10-2018 IPR009776 Sporulation stage 0, protein M VIBNI_A0473 66db3e0ef1eed5524cf6fb46854b7f12 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 336 4.6E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3463 46122032d890c7d438f17e8491d0339e 235 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 173 201 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_A3463 46122032d890c7d438f17e8491d0339e 235 SUPERFAMILY SSF51161 51 219 7.79E-31 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_A3463 46122032d890c7d438f17e8491d0339e 235 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 165 198 5.9E-9 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_A3463 46122032d890c7d438f17e8491d0339e 235 Gene3D G3DSA:2.160.10.10 61 229 1.9E-38 T 15-10-2018 VIBNI_A2542 f11f5b2a71fcc3b004d0cd51ba1e714c 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 335 4.2E-35 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2542 f11f5b2a71fcc3b004d0cd51ba1e714c 340 SUPERFAMILY SSF161098 93 323 2.4E-14 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3352 953f397c70a3973503cc16435f8a6794 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 119 1.8E-48 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 VIBNI_A3352 953f397c70a3973503cc16435f8a6794 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 12 116 5.0E-45 T 15-10-2018 IPR009867 Protein of unknown function DUF1422 VIBNI_B0810 e7b3adcb179d058d0437660f7a3cb7a8 171 SUPERFAMILY SSF54427 32 153 1.49E-18 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0810 e7b3adcb179d058d0437660f7a3cb7a8 171 Pfam PF07366 SnoaL-like polyketide cyclase 38 149 2.8E-7 T 15-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VIBNI_B0810 e7b3adcb179d058d0437660f7a3cb7a8 171 Gene3D G3DSA:3.10.450.50 27 153 1.2E-26 T 15-10-2018 VIBNI_A3190 b4052e65dbb5f7b3c38948231c18a3bf 263 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 35 156 9.1E-32 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VIBNI_A3190 b4052e65dbb5f7b3c38948231c18a3bf 263 Gene3D G3DSA:3.10.50.40 147 261 1.6E-42 T 15-10-2018 VIBNI_A3190 b4052e65dbb5f7b3c38948231c18a3bf 263 SUPERFAMILY SSF54534 48 252 4.52E-62 T 15-10-2018 VIBNI_A3190 b4052e65dbb5f7b3c38948231c18a3bf 263 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 250 8.3E-30 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A3190 b4052e65dbb5f7b3c38948231c18a3bf 263 Gene3D G3DSA:1.10.287.460 30 146 3.4E-28 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 Pfam PF00364 Biotin-requiring enzyme 5 78 3.5E-14 T 15-10-2018 IPR000089 Biotin/lipoyl attachment VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 Gene3D G3DSA:2.40.50.100 1 78 2.6E-21 T 15-10-2018 VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 SUPERFAMILY SSF51230 5 78 1.83E-18 T 15-10-2018 IPR011053 Single hybrid motif VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 4.9E-9 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 4.9E-9 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_B0750 d6d71f03297271dec24f30b83681c482 79 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 4.9E-9 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VIBNI_A2991 6317dce378d679313cd35e61d749cd2e 186 SUPERFAMILY SSF54523 9 128 6.04E-5 T 15-10-2018 VIBNI_A2991 6317dce378d679313cd35e61d749cd2e 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 8.5E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2991 6317dce378d679313cd35e61d749cd2e 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 27 1.2E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_B1514 f110dea7c300d4bca6e090a16dd37c48 109 Gene3D G3DSA:3.30.70.100 10 100 1.6E-37 T 15-10-2018 VIBNI_B1514 f110dea7c300d4bca6e090a16dd37c48 109 SUPERFAMILY SSF54909 4 105 3.86E-32 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1514 f110dea7c300d4bca6e090a16dd37c48 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 82 4.2E-6 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VIBNI_B1175 2192c7e86cf936220c5cf9d5ad49f277 345 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 47 275 1.4E-57 T 15-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 VIBNI_B1175 2192c7e86cf936220c5cf9d5ad49f277 345 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 61 296 7.3E-58 T 15-10-2018 VIBNI_B1175 2192c7e86cf936220c5cf9d5ad49f277 345 Gene3D G3DSA:3.40.190.10 144 251 1.5E-53 T 15-10-2018 VIBNI_B1175 2192c7e86cf936220c5cf9d5ad49f277 345 SUPERFAMILY SSF53850 70 319 1.5E-48 T 15-10-2018 VIBNI_B1175 2192c7e86cf936220c5cf9d5ad49f277 345 Gene3D G3DSA:3.40.190.10 62 281 1.5E-53 T 15-10-2018 VIBNI_A0486 7dadca790cff6f850fdebacce2ae8393 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 303 9.0E-27 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0974 35a0b2f08a372ec919cf72145953248e 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 1.0E-89 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VIBNI_A3474 401d6968656ee0bdb1473061e80d4fed 408 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 319 406 9.0E-9 T 15-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VIBNI_B1029 0d163fb8277052273fc5a4764779ac02 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 59 1.6E-9 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VIBNI_B1029 0d163fb8277052273fc5a4764779ac02 157 SUPERFAMILY SSF54534 19 156 1.89E-49 T 15-10-2018 VIBNI_B1029 0d163fb8277052273fc5a4764779ac02 157 Gene3D G3DSA:3.10.50.40 20 157 3.4E-52 T 15-10-2018 VIBNI_B1029 0d163fb8277052273fc5a4764779ac02 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 154 1.1E-27 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VIBNI_A0965 7ebf6f984a7beb657efe4da2ba483fd8 493 Gene3D G3DSA:3.40.190.10 13 264 3.9E-60 T 15-10-2018 VIBNI_A0965 7ebf6f984a7beb657efe4da2ba483fd8 493 PIRSF PIRSF002741 17 493 1.6E-92 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A0965 7ebf6f984a7beb657efe4da2ba483fd8 493 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 399 1.0E-73 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A0965 7ebf6f984a7beb657efe4da2ba483fd8 493 Gene3D G3DSA:3.10.105.10 265 462 5.0E-42 T 15-10-2018 VIBNI_A0965 7ebf6f984a7beb657efe4da2ba483fd8 493 SUPERFAMILY SSF53850 22 491 1.13E-115 T 15-10-2018 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 SMART SM00260 15 161 1.6E-23 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 SUPERFAMILY SSF52172 194 321 5.98E-30 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 Gene3D G3DSA:2.30.30.40 37 155 1.3E-30 T 15-10-2018 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 Pfam PF01584 CheW-like domain 38 163 5.1E-31 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 SUPERFAMILY SSF50341 10 166 6.15E-33 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 PIRSF PIRSF002867 1 324 1.4E-103 T 15-10-2018 IPR024181 Chemotaxis response regulator CheV VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 SMART SM00448 194 319 1.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 Gene3D G3DSA:3.40.50.2300 180 323 2.2E-30 T 15-10-2018 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 Pfam PF00072 Response regulator receiver domain 196 318 1.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1049 6eeff23d847746cd039d2695c780b933 325 Gene3D G3DSA:2.40.50.180 45 161 1.3E-30 T 15-10-2018 VIBNI_B1538 62b2539809bc9e00c9e7b34b8d23e180 277 Gene3D G3DSA:3.40.50.970 1 277 4.6E-89 T 15-10-2018 VIBNI_B1538 62b2539809bc9e00c9e7b34b8d23e180 277 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 14 270 8.8E-48 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B1538 62b2539809bc9e00c9e7b34b8d23e180 277 SUPERFAMILY SSF52518 4 272 1.54E-75 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0120 9cc75b218c8814a876fbb6a6b0938f9c 136 Gene3D G3DSA:3.40.190.10 18 136 2.8E-6 T 15-10-2018 VIBNI_A0120 9cc75b218c8814a876fbb6a6b0938f9c 136 SUPERFAMILY SSF53850 10 122 3.26E-9 T 15-10-2018 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 Gene3D G3DSA:3.40.309.10 219 420 6.2E-154 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 SUPERFAMILY SSF53720 15 447 1.44E-112 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 Gene3D G3DSA:3.40.605.10 19 440 6.2E-154 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 215 222 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 Pfam PF00171 Aldehyde dehydrogenase family 19 440 4.2E-86 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A3762 451dad107277abbd76504985bf55291c 469 PIRSF PIRSF036492 1 469 5.9E-161 T 15-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 Gene3D G3DSA:3.40.50.720 1 245 2.7E-76 T 15-10-2018 VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0073 T 15-10-2018 VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.3E-115 T 15-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 SUPERFAMILY SSF51735 3 245 7.85E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1307 12431487f74460a067ca7d8722b42554 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.4E-59 T 15-10-2018 VIBNI_A3770 a6ffffc6798ac0c56762b50b0dd60988 842 PIRSF PIRSF001444 1 842 0.0 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VIBNI_A3770 a6ffffc6798ac0c56762b50b0dd60988 842 Pfam PF12633 Adenylate cyclase NT domain 6 198 2.9E-77 T 15-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VIBNI_A3770 a6ffffc6798ac0c56762b50b0dd60988 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.6E-256 T 15-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VIBNI_B1989 e38fb463cce595c2632d02347252903c 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 358 2.1E-41 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1989 e38fb463cce595c2632d02347252903c 387 SUPERFAMILY SSF55073 199 364 7.22E-42 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B1989 e38fb463cce595c2632d02347252903c 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 362 2.9E-42 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1989 e38fb463cce595c2632d02347252903c 387 SMART SM00267 183 363 1.6E-48 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1989 e38fb463cce595c2632d02347252903c 387 Gene3D G3DSA:3.30.70.270 189 377 2.2E-48 T 15-10-2018 VIBNI_A0530 966e2ca48bbf58ce0cce9eb009b57d3e 150 Pfam PF14352 Domain of unknown function (DUF4402) 55 149 6.6E-12 T 15-10-2018 IPR025514 Protein of unknown function DUF4402 VIBNI_A0170 a58b06f755eee9c2ad92a29e0474b703 64 Gene3D G3DSA:3.30.50.10 1 64 3.0E-24 T 15-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VIBNI_A0170 a58b06f755eee9c2ad92a29e0474b703 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 2.2E-24 T 15-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VIBNI_A0170 a58b06f755eee9c2ad92a29e0474b703 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.151 T 15-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VIBNI_A0170 a58b06f755eee9c2ad92a29e0474b703 64 SUPERFAMILY SSF57716 2 62 2.71E-21 T 15-10-2018 VIBNI_B0789 0012280d6ff6eca1fd2fc36c4826ac3c 203 Pfam PF01810 LysE type translocator 14 198 3.6E-17 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3139 256bb6c9653fbe9a6c5c80b49ad80a25 192 Gene3D G3DSA:2.60.120.10 3 139 4.9E-18 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_A3139 256bb6c9653fbe9a6c5c80b49ad80a25 192 SUPERFAMILY SSF51206 17 141 4.98E-19 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like VIBNI_A3356 9918fda7e456d9272dae75bd702bbd27 271 Pfam PF04072 Leucine carboxyl methyltransferase 71 215 1.5E-7 T 15-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VIBNI_A3356 9918fda7e456d9272dae75bd702bbd27 271 SUPERFAMILY SSF53335 19 251 7.89E-36 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A3356 9918fda7e456d9272dae75bd702bbd27 271 PIRSF PIRSF028177 6 271 4.7E-70 T 15-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VIBNI_A3356 9918fda7e456d9272dae75bd702bbd27 271 Gene3D G3DSA:3.40.50.150 14 261 1.5E-20 T 15-10-2018 VIBNI_A3883 bff29b09a2456a308c6a8a0a0fccdd06 316 Gene3D G3DSA:2.60.120.1440 99 236 7.2E-20 T 15-10-2018 VIBNI_A3883 bff29b09a2456a308c6a8a0a0fccdd06 316 Pfam PF16220 Domain of unknown function (DUF4880) 12 54 4.1E-12 T 15-10-2018 IPR032623 FecR, N-terminal VIBNI_A3883 bff29b09a2456a308c6a8a0a0fccdd06 316 PIRSF PIRSF018266 3 313 2.2E-73 T 15-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component VIBNI_A3883 bff29b09a2456a308c6a8a0a0fccdd06 316 Pfam PF04773 FecR protein 109 199 1.1E-18 T 15-10-2018 IPR006860 FecR protein VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 SUPERFAMILY SSF53187 15 486 1.62E-61 T 15-10-2018 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PIRSF PIRSF016599 5 489 4.4E-214 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 11 486 2.0E-181 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.8E-89 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 Pfam PF01546 Peptidase family M20/M25/M40 77 483 1.2E-20 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 Pfam PF07687 Peptidase dimerisation domain 211 295 7.3E-7 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 Gene3D G3DSA:3.40.630.10 1 233 6.7E-66 T 15-10-2018 VIBNI_A0645 93769f9a0fe91862b45fe0ab5f0c814b 490 Gene3D G3DSA:3.40.630.10 380 490 1.1E-22 T 15-10-2018 VIBNI_A2718 419bd35d65fc0d1e1221881fd8ff2371 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.006 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 VIBNI_A2718 419bd35d65fc0d1e1221881fd8ff2371 92 SUPERFAMILY SSF117991 7 92 9.29E-31 T 15-10-2018 IPR027471 YbeD-like domain superfamily VIBNI_A2718 419bd35d65fc0d1e1221881fd8ff2371 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 5.3E-28 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 VIBNI_A2718 419bd35d65fc0d1e1221881fd8ff2371 92 Gene3D G3DSA:3.30.70.260 6 92 3.9E-32 T 15-10-2018 VIBNI_A1535 08d89247b7d69057560a9d26bb6782d3 160 SUPERFAMILY SSF55729 3 143 1.33E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1535 08d89247b7d69057560a9d26bb6782d3 160 Gene3D G3DSA:3.40.630.30 9 156 8.6E-18 T 15-10-2018 VIBNI_A1535 08d89247b7d69057560a9d26bb6782d3 160 Pfam PF00583 Acetyltransferase (GNAT) family 46 140 6.4E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0485 b32f7f61447208c9664d92919513a867 369 Gene3D G3DSA:3.40.50.1980 26 368 3.0E-95 T 15-10-2018 VIBNI_B0485 b32f7f61447208c9664d92919513a867 369 SUPERFAMILY SSF53807 30 358 2.51E-45 T 15-10-2018 VIBNI_B0485 b32f7f61447208c9664d92919513a867 369 Pfam PF01497 Periplasmic binding protein 70 314 7.2E-32 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A2641 18abef58a5c7097d800efea42ff32547 131 PIRSF PIRSF002889 1 131 5.7E-33 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VIBNI_A2641 18abef58a5c7097d800efea42ff32547 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 4.9E-28 T 15-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VIBNI_A1904 bb4319e51d8ee518b2a3e8ac63ef5090 376 Gene3D G3DSA:2.130.10.10 7 375 3.5E-87 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A1904 bb4319e51d8ee518b2a3e8ac63ef5090 376 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 373 2.6E-78 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VIBNI_A1904 bb4319e51d8ee518b2a3e8ac63ef5090 376 SUPERFAMILY SSF51004 50 373 5.1E-34 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VIBNI_A0395 3e4a12532ebc3ac30662eef6ea169ff7 181 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 174 1.9E-20 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_A2382 177dc30c8ba73c46d040da7d59718156 276 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 20 276 2.4E-86 T 15-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 SUPERFAMILY SSF51182 27 194 8.0E-13 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 SUPERFAMILY SSF46689 224 271 4.21E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 Gene3D G3DSA:1.10.10.60 170 274 6.7E-20 T 15-10-2018 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 6.7E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 6.7E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 SMART SM00342 186 268 7.6E-17 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 Pfam PF12833 Helix-turn-helix domain 194 270 7.1E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A0865 3929426ad733b5bbded0672d8e2d63fc 280 Gene3D G3DSA:2.60.120.10 3 100 2.4E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 Pfam PF00005 ABC transporter 22 173 2.0E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 Gene3D G3DSA:3.40.50.300 261 501 4.5E-33 T 15-10-2018 VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 SUPERFAMILY SSF52540 272 486 2.39E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 SUPERFAMILY SSF52540 6 234 3.8E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 SMART SM00382 31 221 2.3E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 Gene3D G3DSA:3.40.50.300 2 242 4.9E-55 T 15-10-2018 VIBNI_B2034 ac6722a026f737af59eb11835dfb09c4 502 Pfam PF00005 ABC transporter 273 427 6.4E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1171 d89bfe77bc8573dfd1feb246a3048f75 296 Gene3D G3DSA:3.60.10.10 17 295 5.7E-22 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B1171 d89bfe77bc8573dfd1feb246a3048f75 296 SUPERFAMILY SSF56219 18 296 1.7E-23 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B1171 d89bfe77bc8573dfd1feb246a3048f75 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 25 271 8.4E-6 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VIBNI_B1591 a9f6dcccf1fde73896fd1b30b5997359 575 SUPERFAMILY SSF50969 112 333 1.1E-16 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VIBNI_B1591 a9f6dcccf1fde73896fd1b30b5997359 575 Gene3D G3DSA:2.130.10.10 15 291 2.0E-13 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 Pfam PF00588 SpoU rRNA Methylase family 5 154 5.6E-34 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 6.5E-83 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 Gene3D G3DSA:3.40.1280.10 1 164 3.8E-62 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 PIRSF PIRSF004808 1 241 9.6E-74 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 SUPERFAMILY SSF75217 5 176 5.43E-38 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases VIBNI_A2789 394f611e92622d34dea04ec42ed5d1ab 241 Gene3D G3DSA:1.10.8.590 173 241 1.4E-29 T 15-10-2018 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 Gene3D G3DSA:1.10.260.40 1 43 1.1E-9 T 15-10-2018 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 SUPERFAMILY SSF47413 1 44 9.38E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 Gene3D G3DSA:3.40.50.2300 142 273 1.8E-65 T 15-10-2018 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 45 289 9.5E-25 T 15-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 Gene3D G3DSA:3.40.50.2300 48 290 1.8E-65 T 15-10-2018 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 33 1.3E-9 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 SUPERFAMILY SSF53822 43 298 9.42E-59 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B0962 457c97c0f490ca6c53e306a2ca19add4 312 SMART SM00354 1 56 2.9E-11 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 SUPERFAMILY SSF55874 299 407 2.1E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 283 3.6E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 SMART SM00388 219 284 3.4E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 Gene3D G3DSA:1.10.287.130 167 279 2.9E-11 T 15-10-2018 VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 SMART SM00387 324 412 5.4E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 SUPERFAMILY SSF47384 204 283 1.67E-9 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 Gene3D G3DSA:3.30.565.10 296 411 7.2E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A2675 e9ab8f85d29ddcd950cf54417c9f23f8 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 406 3.5E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0630 7867425622ea225656850b8fbebcc0e4 270 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0630 7867425622ea225656850b8fbebcc0e4 270 SMART SM00382 39 228 2.0E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0630 7867425622ea225656850b8fbebcc0e4 270 Pfam PF00005 ABC transporter 31 178 4.1E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0630 7867425622ea225656850b8fbebcc0e4 270 SUPERFAMILY SSF52540 19 233 3.73E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0630 7867425622ea225656850b8fbebcc0e4 270 Gene3D G3DSA:3.40.50.300 15 267 6.5E-66 T 15-10-2018 VIBNI_B0912 fe35c5469b13b508378ba022d9e671bf 105 Gene3D G3DSA:1.10.760.10 25 104 1.5E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_B0912 fe35c5469b13b508378ba022d9e671bf 105 SUPERFAMILY SSF46626 24 104 2.18E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2482 3d3284fc00ff979b90f9d6b27165a17d 227 Pfam PF06930 Protein of unknown function (DUF1282) 14 221 7.6E-35 T 15-10-2018 IPR009698 Protein of unknown function DUF1282 VIBNI_A1740 23f7ff951f6e8a722b8a54c17bc7eb6d 77 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 1.1E-16 T 15-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VIBNI_A1740 23f7ff951f6e8a722b8a54c17bc7eb6d 77 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 5.8E-21 T 15-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VIBNI_A3542 9fcf450e84dc6368c9827b86e1fff5ab 403 Gene3D G3DSA:2.40.160.50 113 401 7.4E-13 T 15-10-2018 VIBNI_A3542 9fcf450e84dc6368c9827b86e1fff5ab 403 Pfam PF01103 Surface antigen 86 376 1.5E-10 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VIBNI_B2149 e3381d17f5154ab4b9e24f9c639d7896 190 Gene3D G3DSA:3.40.50.360 1 186 5.1E-39 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B2149 e3381d17f5154ab4b9e24f9c639d7896 190 Pfam PF02525 Flavodoxin-like fold 2 172 1.1E-34 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_B2149 e3381d17f5154ab4b9e24f9c639d7896 190 SUPERFAMILY SSF52218 1 186 2.33E-43 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B1093 16b90548062512a22288c4ca96e68fd3 107 Gene3D G3DSA:3.30.70.120 1 105 9.9E-36 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VIBNI_B1093 16b90548062512a22288c4ca96e68fd3 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.9E-33 T 15-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 VIBNI_B1093 16b90548062512a22288c4ca96e68fd3 107 SUPERFAMILY SSF54913 3 106 4.82E-35 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VIBNI_B0760 0ddd3c9dbd5cf7c4a9cfd22c2aee7138 397 Gene3D G3DSA:1.50.10.10 3 396 2.9E-137 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VIBNI_B0760 0ddd3c9dbd5cf7c4a9cfd22c2aee7138 397 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 35 386 2.8E-104 T 15-10-2018 VIBNI_B0760 0ddd3c9dbd5cf7c4a9cfd22c2aee7138 397 SUPERFAMILY SSF48208 7 396 1.21E-112 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VIBNI_A0287 41e6526d502548146e011742050f3d52 157 PIRSF PIRSF028680 1 157 2.5E-51 T 15-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VIBNI_B0855 282e09a3437a881c0b4a73a34d375fbd 367 SUPERFAMILY SSF69593 79 324 9.42E-10 T 15-10-2018 VIBNI_B0855 282e09a3437a881c0b4a73a34d375fbd 367 Pfam PF01553 Acyltransferase 92 194 7.9E-10 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 Pfam PF13727 CoA-binding domain 63 240 4.3E-41 T 15-10-2018 VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 Pfam PF02397 Bacterial sugar transferase 276 458 3.1E-65 T 15-10-2018 IPR003362 Bacterial sugar transferase VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 Gene3D G3DSA:3.40.50.720 140 262 9.7E-16 T 15-10-2018 VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 SUPERFAMILY SSF51735 141 270 3.46E-7 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 466 5.9E-156 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VIBNI_B1622 cba47655937143a435bd005eea99a9d9 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 37 466 5.6E-173 T 15-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VIBNI_A0014 ab5197e787b7016883ef747d68c38f37 82 SUPERFAMILY SSF64307 8 80 2.35E-24 T 15-10-2018 IPR036868 TusA-like domain superfamily VIBNI_A0014 ab5197e787b7016883ef747d68c38f37 82 Pfam PF01206 Sulfurtransferase TusA 10 79 4.1E-22 T 15-10-2018 IPR001455 TusA-like domain VIBNI_A0014 ab5197e787b7016883ef747d68c38f37 82 Gene3D G3DSA:3.30.110.40 5 80 9.7E-28 T 15-10-2018 IPR036868 TusA-like domain superfamily VIBNI_A0014 ab5197e787b7016883ef747d68c38f37 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 15-10-2018 IPR001455 TusA-like domain VIBNI_A0014 ab5197e787b7016883ef747d68c38f37 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.373 T 15-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VIBNI_B2164 99512d1af69f3e8cedc53d6b76097bb5 214 Pfam PF06197 Protein of unknown function (DUF998) 15 196 1.1E-30 T 15-10-2018 IPR009339 Protein of unknown function DUF998 VIBNI_A2234 7d57e01485b443c3e473ca75a7c8d30c 520 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 30 237 1.3E-18 T 15-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 VIBNI_B0288 af288900a88daecea0f4bd12f3f23278 434 Gene3D G3DSA:3.40.710.10 101 409 4.0E-87 T 15-10-2018 VIBNI_B0288 af288900a88daecea0f4bd12f3f23278 434 Gene3D G3DSA:1.20.58.710 151 268 4.0E-87 T 15-10-2018 VIBNI_B0288 af288900a88daecea0f4bd12f3f23278 434 Pfam PF00144 Beta-lactamase 106 421 3.5E-30 T 15-10-2018 IPR001466 Beta-lactamase-related VIBNI_B0288 af288900a88daecea0f4bd12f3f23278 434 SUPERFAMILY SSF56601 37 416 4.28E-72 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A2063 eddfbd9baecd091cc13588279f6c8442 378 Gene3D G3DSA:3.40.50.720 1 150 7.5E-29 T 15-10-2018 VIBNI_A2063 eddfbd9baecd091cc13588279f6c8442 378 SUPERFAMILY SSF51735 1 177 5.98E-28 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_A2063 eddfbd9baecd091cc13588279f6c8442 378 SUPERFAMILY SSF55347 158 309 2.62E-10 T 15-10-2018 VIBNI_A2063 eddfbd9baecd091cc13588279f6c8442 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 2.8E-15 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VIBNI_A2063 eddfbd9baecd091cc13588279f6c8442 378 Gene3D G3DSA:3.30.360.10 154 377 4.1E-21 T 15-10-2018 VIBNI_B0034 76aac227234283c4fb4c42b150b8434f 292 SUPERFAMILY SSF81345 5 266 4.71E-43 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0034 76aac227234283c4fb4c42b150b8434f 292 Gene3D G3DSA:1.10.3470.10 39 274 4.9E-10 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0034 76aac227234283c4fb4c42b150b8434f 292 Pfam PF00950 ABC 3 transport family 13 268 3.4E-88 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VIBNI_A2178 385c2b259cb09ddcddaa5a9adcb37993 293 Pfam PF00892 EamA-like transporter family 154 285 4.4E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A2178 385c2b259cb09ddcddaa5a9adcb37993 293 Pfam PF00892 EamA-like transporter family 11 145 1.1E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A2178 385c2b259cb09ddcddaa5a9adcb37993 293 SUPERFAMILY SSF103481 198 289 8.89E-10 T 15-10-2018 VIBNI_A2178 385c2b259cb09ddcddaa5a9adcb37993 293 SUPERFAMILY SSF103481 48 145 1.29E-9 T 15-10-2018 VIBNI_B0249 d66aea50e7efea1b307a389816edbdd8 143 Gene3D G3DSA:3.40.630.30 1 139 4.8E-21 T 15-10-2018 VIBNI_B0249 d66aea50e7efea1b307a389816edbdd8 143 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 1.3E-10 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0249 d66aea50e7efea1b307a389816edbdd8 143 SUPERFAMILY SSF55729 1 130 3.6E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1188 be0454956679818f1ecdd868fe0da40d 156 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 5.6E-40 T 15-10-2018 IPR009476 Protein of unknown function DUF1097 VIBNI_A3181 ba5c9ccef57d169526e210f02f99220a 62 Gene3D G3DSA:1.10.10.1100 1 57 3.9E-19 T 15-10-2018 VIBNI_A3181 ba5c9ccef57d169526e210f02f99220a 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 51 1.3E-12 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 255 4.7E-46 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 SUPERFAMILY SSF53067 11 257 5.94E-60 T 15-10-2018 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 463 3.3E-33 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 Gene3D G3DSA:3.30.420.40 7 255 1.9E-69 T 15-10-2018 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 PIRSF PIRSF000538 8 517 3.7E-109 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 Gene3D G3DSA:3.30.420.40 258 517 6.1E-70 T 15-10-2018 VIBNI_A0488 9398c821461bded3e110b3014bbc77c8 521 SUPERFAMILY SSF53067 258 512 4.06E-57 T 15-10-2018 VIBNI_B0523 633da670297148e150047a02fe6f05e6 236 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 219 8.8E-19 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VIBNI_B0523 633da670297148e150047a02fe6f05e6 236 Gene3D G3DSA:3.40.50.1360 1 235 6.0E-55 T 15-10-2018 VIBNI_B0523 633da670297148e150047a02fe6f05e6 236 SUPERFAMILY SSF100950 1 233 4.19E-52 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 SMART SM00825 Beta-ketoacyl synthase 4 403 4.5E-13 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 5.7E-43 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 Gene3D G3DSA:3.40.47.10 6 257 2.6E-67 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 5.0E-28 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 SUPERFAMILY SSF53901 213 401 3.1E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 SUPERFAMILY SSF53901 1 251 1.45E-64 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site VIBNI_A0781 016febdd7a2e75738c7fd4e88dde9b8e 403 Gene3D G3DSA:3.40.47.10 258 401 2.9E-51 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A2210 adaea6966628bc64f03ab660b3dc5d26 396 Gene3D G3DSA:1.20.1720.10 13 392 3.5E-101 T 15-10-2018 VIBNI_A2210 adaea6966628bc64f03ab660b3dc5d26 396 Pfam PF07690 Major Facilitator Superfamily 20 360 5.6E-52 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A2210 adaea6966628bc64f03ab660b3dc5d26 396 SUPERFAMILY SSF103473 6 394 1.22E-65 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A2210 adaea6966628bc64f03ab660b3dc5d26 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 391 2.4E-117 T 15-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VIBNI_B2064 1f74b84174fe0e46ef4ae591dbf0de50 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 2.2E-116 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B2064 1f74b84174fe0e46ef4ae591dbf0de50 433 PIRSF PIRSF006066 4 433 4.2E-167 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B2064 1f74b84174fe0e46ef4ae591dbf0de50 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 1.9E-137 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3681 02d469a70d438b6fecbfefc756bcc450 222 SUPERFAMILY SSF159270 23 219 1.83E-53 T 15-10-2018 IPR023373 YmcC-like superfamily VIBNI_A3681 02d469a70d438b6fecbfefc756bcc450 222 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 18 215 4.3E-57 T 15-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VIBNI_A3681 02d469a70d438b6fecbfefc756bcc450 222 Gene3D G3DSA:2.40.360.10 21 220 1.7E-63 T 15-10-2018 IPR023373 YmcC-like superfamily VIBNI_A3103 c3247a717c03175b543da5fdbb6124bd 150 Pfam PF11747 Killing trait 38 78 1.7E-10 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_A2735 38041187ddd8d075eb1c7b03139bd133 139 SUPERFAMILY SSF159888 12 135 2.75E-5 T 15-10-2018 VIBNI_A2735 38041187ddd8d075eb1c7b03139bd133 139 Pfam PF08818 Domain of unknown function (DU1801) 25 129 4.8E-9 T 15-10-2018 IPR014922 Domain of unknown function DUF1801 VIBNI_A3279 4d69fbb5df8f85f3b81d182bc9777c8c 433 PIRSF PIRSF004539 1 433 1.4E-179 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VIBNI_A3279 4d69fbb5df8f85f3b81d182bc9777c8c 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 5.3E-149 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VIBNI_A3279 4d69fbb5df8f85f3b81d182bc9777c8c 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 431 3.2E-185 T 15-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 SUPERFAMILY SSF55129 1 58 2.35E-23 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 Gene3D G3DSA:3.30.1390.20 1 58 5.5E-28 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 15-10-2018 IPR018038 Ribosomal protein L30, conserved site VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 PIRSF PIRSF002211 1 58 1.7E-28 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.3E-26 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 5.0E-21 T 15-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VIBNI_A3160 84ce8c61d575a65c708ff6e7bc770eb4 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.117 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VIBNI_A2750 3171107dc50f45eabdfff2633d0a35ad 525 Gene3D G3DSA:3.40.605.10 44 512 2.1E-198 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A2750 3171107dc50f45eabdfff2633d0a35ad 525 SUPERFAMILY SSF53720 18 507 9.29E-105 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A2750 3171107dc50f45eabdfff2633d0a35ad 525 Gene3D G3DSA:3.40.309.10 268 457 2.1E-198 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A2750 3171107dc50f45eabdfff2633d0a35ad 525 Pfam PF00171 Aldehyde dehydrogenase family 17 469 2.0E-51 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A2453 459b0c56c094dca4d451acddb4a9b473 162 Pfam PF11066 Protein of unknown function (DUF2867) 14 157 3.0E-34 T 15-10-2018 IPR021295 Protein of unknown function DUF2867 VIBNI_A1143 3cce4b986ea5dc2b340f9585be79ccd2 244 Pfam PF02698 DUF218 domain 58 176 1.3E-18 T 15-10-2018 IPR003848 Domain of unknown function DUF218 VIBNI_B1142 0ec731c874c489019c628d39063f48ee 289 Pfam PF11060 Protein of unknown function (DUF2861) 23 285 1.9E-89 T 15-10-2018 IPR021290 Protein of unknown function DUF2861 VIBNI_B1302 073c4b412f657514c1884b01341998c6 191 SUPERFAMILY SSF48695 16 190 7.62E-55 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily VIBNI_B1302 073c4b412f657514c1884b01341998c6 191 PIRSF PIRSF000013 1 191 1.7E-92 T 15-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VIBNI_B1302 073c4b412f657514c1884b01341998c6 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 6.9E-70 T 15-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VIBNI_B1302 073c4b412f657514c1884b01341998c6 191 Gene3D G3DSA:1.10.3820.10 10 187 1.2E-32 T 15-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VIBNI_B0186 b7567525d07613ef2229f1abbd1f63ee 300 SUPERFAMILY SSF103481 42 139 4.18E-11 T 15-10-2018 VIBNI_B0186 b7567525d07613ef2229f1abbd1f63ee 300 SUPERFAMILY SSF103481 203 298 6.54E-8 T 15-10-2018 VIBNI_B0186 b7567525d07613ef2229f1abbd1f63ee 300 Pfam PF00892 EamA-like transporter family 4 135 7.2E-9 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3873 496b5c3040c414e8d4d1ad8ed866276c 144 Pfam PF00258 Flavodoxin 4 136 5.0E-21 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VIBNI_A3873 496b5c3040c414e8d4d1ad8ed866276c 144 SUPERFAMILY SSF52218 2 143 4.19E-38 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A3873 496b5c3040c414e8d4d1ad8ed866276c 144 Gene3D G3DSA:3.40.50.360 1 144 2.3E-44 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 Pfam PF00293 NUDIX domain 7 145 2.3E-26 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 SUPERFAMILY SSF55811 6 154 1.49E-32 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.4E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.4E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.265 T 15-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VIBNI_A0329 5f8f4da08c495dd19d282c21122902ca 172 Gene3D G3DSA:3.90.79.10 1 158 2.1E-50 T 15-10-2018 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 9.1E-27 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.2E-112 T 15-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 Gene3D G3DSA:1.10.10.10 127 229 2.5E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 SUPERFAMILY SSF52172 3 183 6.45E-43 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 SMART SM00448 3 116 4.3E-45 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 SMART SM00862 150 225 1.7E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 Pfam PF00072 Response regulator receiver domain 5 116 2.1E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0405 68cb6e10aebf2921a0bd5d1c3af5fe08 229 Gene3D G3DSA:3.40.50.2300 1 126 6.6E-39 T 15-10-2018 VIBNI_A1265 7b73aa03786a676fa68b7fb1279ea17b 267 SUPERFAMILY SSF53474 52 262 8.98E-30 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1265 7b73aa03786a676fa68b7fb1279ea17b 267 Pfam PF00561 alpha/beta hydrolase fold 52 193 1.4E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A1265 7b73aa03786a676fa68b7fb1279ea17b 267 Gene3D G3DSA:3.40.50.1820 41 260 7.3E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1119 d4f607754feb1174516bb32e3485cc28 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 4.6E-56 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain VIBNI_A1119 d4f607754feb1174516bb32e3485cc28 608 Gene3D G3DSA:3.10.105.10 317 541 1.7E-41 T 15-10-2018 VIBNI_A1119 d4f607754feb1174516bb32e3485cc28 608 PIRSF PIRSF002741 1 563 3.1E-63 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VIBNI_A1119 d4f607754feb1174516bb32e3485cc28 608 Gene3D G3DSA:3.40.190.10 22 316 3.2E-43 T 15-10-2018 VIBNI_A1119 d4f607754feb1174516bb32e3485cc28 608 SUPERFAMILY SSF53850 42 560 3.98E-90 T 15-10-2018 VIBNI_A1218 36faa7d14505c079885f7a2e79c65bc2 256 Pfam PF00005 ABC transporter 21 181 1.7E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1218 36faa7d14505c079885f7a2e79c65bc2 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 4.5E-10 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VIBNI_A1218 36faa7d14505c079885f7a2e79c65bc2 256 Gene3D G3DSA:3.40.50.300 1 253 4.4E-61 T 15-10-2018 VIBNI_A1218 36faa7d14505c079885f7a2e79c65bc2 256 SMART SM00382 29 230 2.7E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1218 36faa7d14505c079885f7a2e79c65bc2 256 SUPERFAMILY SSF52540 4 253 3.17E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2239 95ad04ea3d11695959f49737531b5090 686 Gene3D G3DSA:3.40.50.300 1 337 4.3E-26 T 15-10-2018 VIBNI_A2239 95ad04ea3d11695959f49737531b5090 686 SUPERFAMILY SSF52540 1 608 9.23E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2239 95ad04ea3d11695959f49737531b5090 686 Pfam PF13476 AAA domain 5 236 7.8E-21 T 15-10-2018 IPR038729 Rad50/SbcC-type AAA domain VIBNI_A3417 add9332ac082e8304e43ef056b10017e 500 Pfam PF02646 RmuC family 177 473 1.8E-103 T 15-10-2018 IPR003798 DNA recombination RmuC VIBNI_A1861 f5c03f79cae865ea46d677f5f2e9a8cf 461 PIRSF PIRSF006066 6 461 5.6E-68 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1861 f5c03f79cae865ea46d677f5f2e9a8cf 461 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 450 1.2E-78 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A1861 f5c03f79cae865ea46d677f5f2e9a8cf 461 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 53 456 3.0E-88 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B0157 ff124e66b07b1c7f144be013fe93b3b0 213 PIRSF PIRSF006324 1 211 2.8E-54 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0157 ff124e66b07b1c7f144be013fe93b3b0 213 Pfam PF01810 LysE type translocator 16 209 2.0E-37 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B2055 54aa900720b2c5d53abc964124a50553 131 Pfam PF11528 Protein of unknown function (DUF3224) 5 127 1.4E-39 T 15-10-2018 IPR021607 Protein of unknown function DUF3224 VIBNI_B2055 54aa900720b2c5d53abc964124a50553 131 SUPERFAMILY SSF159238 4 130 9.16E-37 T 15-10-2018 IPR023159 SO1590-like superfamily VIBNI_B2055 54aa900720b2c5d53abc964124a50553 131 Gene3D G3DSA:2.40.350.10 1 131 4.4E-43 T 15-10-2018 IPR023159 SO1590-like superfamily VIBNI_B1767 ffb6887a68e22b3cec47236c82b62fae 212 PIRSF PIRSF008159 1 211 1.2E-54 T 15-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, VIBNI_B1767 ffb6887a68e22b3cec47236c82b62fae 212 Pfam PF06226 Protein of unknown function (DUF1007) 11 210 1.8E-53 T 15-10-2018 IPR010412 Protein of unknown function DUF1007 VIBNI_A0384 1a9c84b0308fcafb0350f21e30a10ee5 110 SUPERFAMILY SSF69754 1 103 1.18E-28 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like VIBNI_A0384 1a9c84b0308fcafb0350f21e30a10ee5 110 Gene3D G3DSA:3.30.160.100 1 108 1.2E-31 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like VIBNI_A0384 1a9c84b0308fcafb0350f21e30a10ee5 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 7.3E-22 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VIBNI_A0384 1a9c84b0308fcafb0350f21e30a10ee5 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 5.6E-28 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VIBNI_B0220 0f2948baa0866ef8de4d756c0ff599da 323 Gene3D G3DSA:3.90.25.60 169 318 1.4E-108 T 15-10-2018 VIBNI_B0220 0f2948baa0866ef8de4d756c0ff599da 323 SUPERFAMILY SSF51735 1 320 3.04E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0220 0f2948baa0866ef8de4d756c0ff599da 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 257 1.1E-28 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_B0220 0f2948baa0866ef8de4d756c0ff599da 323 Gene3D G3DSA:3.40.50.720 5 310 1.4E-108 T 15-10-2018 VIBNI_A0681 1d86571714f0d1a064d753f538679c54 206 Gene3D G3DSA:3.40.50.1820 12 190 8.3E-29 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0681 1d86571714f0d1a064d753f538679c54 206 SUPERFAMILY SSF53474 9 201 4.05E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0681 1d86571714f0d1a064d753f538679c54 206 Pfam PF01738 Dienelactone hydrolase family 60 185 1.6E-4 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 SMART SM00116 16 65 2.4 T 15-10-2018 IPR000644 CBS domain VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 SMART SM00116 83 130 1.8E-5 T 15-10-2018 IPR000644 CBS domain VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 Pfam PF00571 CBS domain 9 64 0.0057 T 15-10-2018 IPR000644 CBS domain VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 Pfam PF00571 CBS domain 78 125 4.6E-10 T 15-10-2018 IPR000644 CBS domain VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 Gene3D G3DSA:3.10.580.10 1 133 2.5E-29 T 15-10-2018 VIBNI_A2607 045e0b96c9703be592759ec7019cf682 134 SUPERFAMILY SSF54631 7 126 5.31E-26 T 15-10-2018 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 SUPERFAMILY SSF46785 2 112 5.87E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.8E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 SUPERFAMILY SSF53850 90 293 1.5E-34 T 15-10-2018 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 Gene3D G3DSA:3.40.190.290 92 288 1.4E-36 T 15-10-2018 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 Pfam PF03466 LysR substrate binding domain 89 289 1.5E-29 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B1358 5b57d4c56f52349b00e99f379e3610b4 298 Gene3D G3DSA:1.10.10.10 4 88 1.6E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 3.0E-19 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 22.964 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 5.7E-33 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 PIRSF PIRSF006169 1 69 1.4E-34 T 15-10-2018 IPR010648 Uncharacterised protein family UPF0270 VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 SUPERFAMILY SSF118001 1 65 6.8E-28 T 15-10-2018 IPR036685 YehU-like superfamily VIBNI_A3204 6424bcf799347d4b7239a505861cd165 70 Gene3D G3DSA:1.10.10.610 1 69 6.2E-29 T 15-10-2018 IPR036685 YehU-like superfamily VIBNI_A3079 607efba9642b2c1c624fc46e40dd5893 381 SUPERFAMILY SSF103473 7 377 2.88E-30 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A3079 607efba9642b2c1c624fc46e40dd5893 381 Gene3D G3DSA:1.20.1250.20 4 371 3.5E-24 T 15-10-2018 VIBNI_A3079 607efba9642b2c1c624fc46e40dd5893 381 Pfam PF07690 Major Facilitator Superfamily 9 224 2.8E-11 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A0830 2ad595f5eca89ed9ee8d7fcb48177dde 237 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 234 2.1E-77 T 15-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VIBNI_A0830 2ad595f5eca89ed9ee8d7fcb48177dde 237 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 214 234 6.7E-6 T 15-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 VIBNI_A3512 43a8b9483287710812035f0e85346e6f 351 Pfam PF00589 Phage integrase family 182 343 6.8E-22 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VIBNI_A3512 43a8b9483287710812035f0e85346e6f 351 SUPERFAMILY SSF56349 68 349 5.59E-45 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VIBNI_A3512 43a8b9483287710812035f0e85346e6f 351 Gene3D G3DSA:1.10.443.10 182 351 3.2E-27 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VIBNI_B0679 216d67e64f7bfe2126c836c8218ce77f 483 Gene3D G3DSA:1.10.530.10 174 410 1.4E-88 T 15-10-2018 VIBNI_B0679 216d67e64f7bfe2126c836c8218ce77f 483 SUPERFAMILY SSF53955 157 413 7.87E-61 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_B0679 216d67e64f7bfe2126c836c8218ce77f 483 Gene3D G3DSA:3.30.20.10 247 315 1.4E-88 T 15-10-2018 VIBNI_B0679 216d67e64f7bfe2126c836c8218ce77f 483 Pfam PF00182 Chitinase class I 176 406 5.5E-38 T 15-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 PIRSF PIRSF006429 11 512 8.2E-142 T 15-10-2018 IPR024188 Glutamate synthase large subunit-like protein VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 SMART SM00704 47 82 2.2E-6 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 SMART SM00704 9 46 2.3E-12 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 PIRSF PIRSF500061 5 513 3.4E-149 T 15-10-2018 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 Pfam PF01645 Conserved region in glutamate synthase 159 480 2.5E-90 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 Gene3D G3DSA:3.20.20.70 162 508 1.7E-99 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 53 77 5.3E-8 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 40 1.1E-10 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 SUPERFAMILY SSF51395 127 504 7.94E-97 T 15-10-2018 VIBNI_B0538 060c29703cd661884d8c659ae37e55a8 513 Gene3D G3DSA:3.40.5.90 1 79 2.7E-32 T 15-10-2018 VIBNI_A3229 f1650ede9a4eb2c3cbf9a8afb7f1ee0c 288 Pfam PF02666 Phosphatidylserine decarboxylase 63 279 8.0E-61 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VIBNI_A3229 f1650ede9a4eb2c3cbf9a8afb7f1ee0c 288 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 286 48.86 T 15-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VIBNI_A3229 f1650ede9a4eb2c3cbf9a8afb7f1ee0c 288 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 6.2E-87 T 15-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VIBNI_A2969 518becd228228ad8316074d68d718cb4 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 3.0E-71 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VIBNI_A2969 518becd228228ad8316074d68d718cb4 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 9.2E-117 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VIBNI_B1413 76abcb4450efb35481e0195e07f72d7c 128 SUPERFAMILY SSF54593 1 124 3.49E-25 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1413 76abcb4450efb35481e0195e07f72d7c 128 Gene3D G3DSA:3.10.180.10 1 126 8.9E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1413 76abcb4450efb35481e0195e07f72d7c 128 Pfam PF12681 Glyoxalase-like domain 4 125 2.2E-16 T 15-10-2018 IPR025870 Glyoxalase-like domain VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00412 Epoxide hydrolase signature 32 50 3.2E-5 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00412 Epoxide hydrolase signature 247 269 3.2E-5 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00412 Epoxide hydrolase signature 95 108 3.2E-5 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 Pfam PF12697 Alpha/beta hydrolase family 28 264 4.8E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 2.6E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.6E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 2.6E-10 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 Gene3D G3DSA:3.40.50.1820 5 272 3.9E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1225 b349cfff9f262c30f3f58b22e8ae8dc6 272 SUPERFAMILY SSF53474 9 271 3.51E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A3300 c1ed71bfea8a3f796fc9de74c9bf14b3 301 SUPERFAMILY SSF103481 40 141 1.31E-11 T 15-10-2018 VIBNI_A3300 c1ed71bfea8a3f796fc9de74c9bf14b3 301 SUPERFAMILY SSF103481 190 289 9.81E-6 T 15-10-2018 VIBNI_A3300 c1ed71bfea8a3f796fc9de74c9bf14b3 301 Pfam PF00892 EamA-like transporter family 152 284 7.5E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3300 c1ed71bfea8a3f796fc9de74c9bf14b3 301 Pfam PF00892 EamA-like transporter family 9 139 7.8E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_A3451 2cc0520d386f4f4ad8815de5317bba2b 142 Pfam PF00582 Universal stress protein family 3 138 5.9E-18 T 15-10-2018 IPR006016 UspA VIBNI_A3451 2cc0520d386f4f4ad8815de5317bba2b 142 SUPERFAMILY SSF52402 3 139 1.67E-29 T 15-10-2018 VIBNI_A3451 2cc0520d386f4f4ad8815de5317bba2b 142 Gene3D G3DSA:3.40.50.620 2 142 1.1E-44 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A3451 2cc0520d386f4f4ad8815de5317bba2b 142 PIRSF PIRSF006276 1 141 5.5E-52 T 15-10-2018 IPR006015 Universal stress protein A VIBNI_B0371 4dc13a478020d7a627c166bcf5a33108 485 SUPERFAMILY SSF48452 221 464 9.21E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2097 30f30c13796333d40a5af58b059ca581 182 Pfam PF13453 Transcription factor zinc-finger 2 43 2.2E-6 T 15-10-2018 IPR027392 Transcription factor zinc-finger VIBNI_A0188 732ee8275d4657efed0e825f8d7b2765 240 Pfam PF16537 Type II secretion system protein B 176 235 2.5E-23 T 15-10-2018 IPR032389 Type II secretion system protein B VIBNI_B0445 e8aebc5c4e4958c4ef6f78910cb8c753 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 305 1.3E-44 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A1233 eb2fbdf41f62dfa3c0863d331956471b 474 Gene3D G3DSA:3.40.309.10 250 440 5.6E-154 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_A1233 eb2fbdf41f62dfa3c0863d331956471b 474 Gene3D G3DSA:3.40.605.10 10 468 5.6E-154 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1233 eb2fbdf41f62dfa3c0863d331956471b 474 SUPERFAMILY SSF53720 5 470 6.41E-147 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_A1233 eb2fbdf41f62dfa3c0863d331956471b 474 Pfam PF00171 Aldehyde dehydrogenase family 14 469 1.6E-146 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_A2479 e31f7435ed94b973fa3fe3cdb10c2755 245 SUPERFAMILY SSF53335 54 212 1.41E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A2479 e31f7435ed94b973fa3fe3cdb10c2755 245 Pfam PF08241 Methyltransferase domain 74 125 2.1E-11 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VIBNI_A2479 e31f7435ed94b973fa3fe3cdb10c2755 245 Gene3D G3DSA:3.40.50.150 53 176 3.8E-15 T 15-10-2018 VIBNI_A0778 d6f6ed0dc0b882395ba83568005d9f0a 141 PIRSF PIRSF037663 1 137 2.1E-11 T 15-10-2018 IPR017255 Acetyltransferase, GNAT, predicted VIBNI_A0778 d6f6ed0dc0b882395ba83568005d9f0a 141 Gene3D G3DSA:3.40.630.30 1 134 4.5E-24 T 15-10-2018 VIBNI_A0778 d6f6ed0dc0b882395ba83568005d9f0a 141 SUPERFAMILY SSF55729 1 135 7.77E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0778 d6f6ed0dc0b882395ba83568005d9f0a 141 Pfam PF13508 Acetyltransferase (GNAT) domain 43 126 7.9E-14 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3510 0f1761ff61046ad8a29b0f5ecee3b34d 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 7.2E-20 T 15-10-2018 IPR014318 Phage shock protein, PspG VIBNI_A3510 0f1761ff61046ad8a29b0f5ecee3b34d 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 2.7E-18 T 15-10-2018 IPR014318 Phage shock protein, PspG VIBNI_B1431 2002a67cb6d83894d394c0318c9e4e63 435 Pfam PF07670 Nucleoside recognition 126 226 4.9E-9 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 Pfam PF16385 Domain of unknown function 389 483 1.0E-20 T 15-10-2018 IPR032158 Domain of unknown function DUF4994 VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 ProSitePatterns PS00523 Sulfatases signature 1. 59 71 - T 15-10-2018 IPR024607 Sulfatase, conserved site VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 ProSitePatterns PS00149 Sulfatases signature 2. 106 116 - T 15-10-2018 IPR024607 Sulfatase, conserved site VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 SUPERFAMILY SSF53649 10 488 6.83E-120 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 Gene3D G3DSA:3.30.1120.10 411 480 1.3E-109 T 15-10-2018 VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 Pfam PF00884 Sulfatase 13 384 7.3E-68 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_B0700 128e168445d53c89becd16cd96c33564 494 Gene3D G3DSA:3.40.720.10 13 410 1.3E-109 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_B1487 e7cc3638d008897ead94d42bae0925bb 204 Pfam PF01810 LysE type translocator 15 201 2.3E-31 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1487 e7cc3638d008897ead94d42bae0925bb 204 PIRSF PIRSF006324 1 203 3.5E-40 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0056 839fc7463666199120e2f1fef007a548 161 SUPERFAMILY SSF82153 26 160 6.93E-44 T 15-10-2018 IPR036378 FAS1 domain superfamily VIBNI_B0056 839fc7463666199120e2f1fef007a548 161 Gene3D G3DSA:2.30.180.10 25 161 3.2E-50 T 15-10-2018 IPR036378 FAS1 domain superfamily VIBNI_B0056 839fc7463666199120e2f1fef007a548 161 SMART SM00554 62 161 2.2E-35 T 15-10-2018 IPR000782 FAS1 domain VIBNI_B0056 839fc7463666199120e2f1fef007a548 161 Pfam PF02469 Fasciclin domain 38 160 7.9E-38 T 15-10-2018 IPR000782 FAS1 domain VIBNI_A1923 da598d6cc1a68367d5e6841816e0d168 436 Pfam PF00263 Bacterial type II and III secretion system protein 238 395 5.2E-41 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_A1923 da598d6cc1a68367d5e6841816e0d168 436 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 378 7.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A1923 da598d6cc1a68367d5e6841816e0d168 436 PRINTS PR00811 Bacterial general secretion pathway protein D signature 187 197 7.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_A1923 da598d6cc1a68367d5e6841816e0d168 436 Pfam PF13629 Pilus formation protein N terminal region 25 92 2.2E-16 T 15-10-2018 IPR032789 Pilus formation protein, N-terminal VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 ProSitePatterns PS00211 ABC transporters family signature. 186 200 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 SUPERFAMILY SSF52540 39 284 1.64E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 Gene3D G3DSA:3.40.50.300 40 287 7.4E-64 T 15-10-2018 VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 SMART SM00382 66 261 6.2E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 Pfam PF00005 ABC transporter 58 213 9.9E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B0961 936a2974fe7632a921aff09acae6b035 289 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 46 289 1.5E-115 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VIBNI_B0490 ca859a8cfc5da0400e4d449e3e752b1e 293 SUPERFAMILY SSF103481 178 277 5.89E-14 T 15-10-2018 VIBNI_B0490 ca859a8cfc5da0400e4d449e3e752b1e 293 Pfam PF00892 EamA-like transporter family 3 133 1.4E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0490 ca859a8cfc5da0400e4d449e3e752b1e 293 Pfam PF00892 EamA-like transporter family 145 273 5.5E-11 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0490 ca859a8cfc5da0400e4d449e3e752b1e 293 SUPERFAMILY SSF103481 37 134 2.35E-12 T 15-10-2018 VIBNI_A1612 5086bc53c1e5e1dfbf78b5dce012a4ec 621 SUPERFAMILY SSF52540 22 177 3.7E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1612 5086bc53c1e5e1dfbf78b5dce012a4ec 621 Pfam PF07693 KAP family P-loop domain 132 261 9.0E-5 T 15-10-2018 IPR011646 KAP family P-loop domain VIBNI_A1612 5086bc53c1e5e1dfbf78b5dce012a4ec 621 Pfam PF07693 KAP family P-loop domain 20 104 1.1E-6 T 15-10-2018 IPR011646 KAP family P-loop domain VIBNI_A1612 5086bc53c1e5e1dfbf78b5dce012a4ec 621 Gene3D G3DSA:3.40.50.300 2 194 5.4E-8 T 15-10-2018 VIBNI_B0573 10c91dad311d2aacd2ced167d031ae4f 365 Gene3D G3DSA:3.30.70.270 197 364 5.0E-48 T 15-10-2018 VIBNI_B0573 10c91dad311d2aacd2ced167d031ae4f 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 359 5.5E-40 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0573 10c91dad311d2aacd2ced167d031ae4f 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 203 357 9.0E-43 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B0573 10c91dad311d2aacd2ced167d031ae4f 365 SUPERFAMILY SSF55073 208 363 1.73E-41 T 15-10-2018 IPR029787 Nucleotide cyclase VIBNI_B0573 10c91dad311d2aacd2ced167d031ae4f 365 SMART SM00267 192 364 1.2E-54 T 15-10-2018 IPR000160 GGDEF domain VIBNI_B1777 645645dd02f73291eb442cc8ec416b4e 584 Gene3D G3DSA:3.50.50.60 6 86 1.4E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_B1777 645645dd02f73291eb442cc8ec416b4e 584 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 61 3.0E-8 T 15-10-2018 VIBNI_B1777 645645dd02f73291eb442cc8ec416b4e 584 SUPERFAMILY SSF51905 9 579 4.53E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 SMART SM00345 20 79 1.3E-12 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.6E-13 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 SUPERFAMILY SSF46785 13 89 2.09E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 Gene3D G3DSA:1.10.10.10 3 80 4.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 Pfam PF00155 Aminotransferase class I and II 99 446 1.6E-24 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 Gene3D G3DSA:3.40.640.10 134 351 5.9E-73 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 SUPERFAMILY SSF53383 94 454 2.47E-76 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A3202 88de13b7cb11bdd222608685a2ef9613 463 Gene3D G3DSA:3.90.1150.10 115 453 5.9E-73 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A3436 6037f73cdee2e812affc37ff3a903ba3 1194 Pfam PF07603 Protein of unknown function (DUF1566) 1028 1160 1.6E-9 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_A3436 6037f73cdee2e812affc37ff3a903ba3 1194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 675 687 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site VIBNI_A2658 142f2f86de6a5bcf2656e6188ec0489a 147 Pfam PF04214 Protein of unknown function, DUF 49 118 7.8E-32 T 15-10-2018 IPR007332 Protein of unknown function DUF411 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 Gene3D G3DSA:3.30.470.10 1 107 1.0E-25 T 15-10-2018 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 SUPERFAMILY SSF56752 1 264 1.57E-63 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 203 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 Gene3D G3DSA:3.20.10.10 112 267 8.2E-51 T 15-10-2018 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 Pfam PF01063 Amino-transferase class IV 24 248 2.5E-40 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VIBNI_A2358 bbbefdd72e805a2f30c1caab9a0f1159 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 264 3.7E-100 T 15-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VIBNI_A0309 5a0ed268d379e5bd60b935f18750ab41 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 4.1E-109 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A0309 5a0ed268d379e5bd60b935f18750ab41 425 PIRSF PIRSF006066 1 425 1.0E-140 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A0309 5a0ed268d379e5bd60b935f18750ab41 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 420 1.2E-122 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2948 32ba99492a00cbd110d474571a869ee5 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 294 40.026 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 VIBNI_A2948 32ba99492a00cbd110d474571a869ee5 297 SUPERFAMILY SSF52540 10 167 1.4E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2948 32ba99492a00cbd110d474571a869ee5 297 PIRSF PIRSF005052 11 297 8.3E-106 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 VIBNI_A2948 32ba99492a00cbd110d474571a869ee5 297 Gene3D G3DSA:3.40.50.300 4 179 4.0E-6 T 15-10-2018 VIBNI_A2948 32ba99492a00cbd110d474571a869ee5 297 Pfam PF03668 P-loop ATPase protein family 13 294 2.0E-110 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 VIBNI_A1070 ab94132f0da33a04d83afab189488bfc 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 253 1.5E-61 T 15-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VIBNI_A3682 10ba4ab0ce60aa6006524a56e7c3f9b2 240 Gene3D G3DSA:3.10.560.10 144 217 4.0E-13 T 15-10-2018 VIBNI_A3682 10ba4ab0ce60aa6006524a56e7c3f9b2 240 Pfam PF06251 Capsule biosynthesis GfcC 26 235 4.5E-41 T 15-10-2018 IPR010425 Domain of unknown function DUF1017 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 SUPERFAMILY SSF46785 3 82 2.98E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 SUPERFAMILY SSF53850 96 301 5.07E-31 T 15-10-2018 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 Gene3D G3DSA:1.10.10.10 5 86 1.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 6.3E-19 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 Pfam PF03466 LysR substrate binding domain 96 300 4.9E-31 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 Gene3D G3DSA:3.40.190.10 105 298 6.9E-55 T 15-10-2018 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 Gene3D G3DSA:3.40.190.10 165 270 6.9E-55 T 15-10-2018 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0510 e02325089924c1268e50791d3f63532d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.5E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_B0835 257ed16a3bd1a0d58935931002afd2e3 232 Pfam PF08279 HTH domain 6 59 3.1E-16 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 VIBNI_B0835 257ed16a3bd1a0d58935931002afd2e3 232 Gene3D G3DSA:1.10.10.10 1 64 1.5E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0835 257ed16a3bd1a0d58935931002afd2e3 232 Pfam PF13280 WYL domain 139 221 5.1E-15 T 15-10-2018 IPR026881 WYL domain VIBNI_B0835 257ed16a3bd1a0d58935931002afd2e3 232 SUPERFAMILY SSF46785 1 61 1.95E-9 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 Pfam PF13439 Glycosyltransferase Family 4 13 158 7.8E-22 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 SUPERFAMILY SSF53756 10 338 1.26E-30 T 15-10-2018 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 Pfam PF01522 Polysaccharide deacetylase 405 541 8.3E-32 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 Gene3D G3DSA:3.40.50.2000 1 164 3.4E-19 T 15-10-2018 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 Gene3D G3DSA:3.20.20.370 337 577 2.2E-59 T 15-10-2018 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 SUPERFAMILY SSF88713 366 563 4.67E-38 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A3728 51d2d29fe435fa57c378e7b86c5953ed 588 Gene3D G3DSA:3.40.50.2000 167 320 5.7E-6 T 15-10-2018 VIBNI_A0507 4f2437d075f0a817665326f3e14cc699 177 Gene3D G3DSA:3.40.430.10 2 175 2.9E-55 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A0507 4f2437d075f0a817665326f3e14cc699 177 Pfam PF01872 RibD C-terminal domain 4 165 9.2E-23 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VIBNI_A0507 4f2437d075f0a817665326f3e14cc699 177 SUPERFAMILY SSF53597 4 175 1.57E-35 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VIBNI_A1991 b8e2624fa769233e7eebc9b018a31715 137 SUPERFAMILY SSF55298 10 136 6.44E-16 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A1991 b8e2624fa769233e7eebc9b018a31715 137 Pfam PF01042 Endoribonuclease L-PSP 28 134 1.6E-9 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_A1991 b8e2624fa769233e7eebc9b018a31715 137 Gene3D G3DSA:3.30.1330.40 9 137 5.9E-17 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0957 a781ec814221a2ff7a5a5960122e0b04 152 SUPERFAMILY SSF52788 29 140 5.36E-8 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VIBNI_B0957 a781ec814221a2ff7a5a5960122e0b04 152 Gene3D G3DSA:3.40.50.2300 31 147 6.6E-8 T 15-10-2018 VIBNI_A0618 f4562c127817d86f2cfba185fb791165 448 Pfam PF00072 Response regulator receiver domain 3 117 3.9E-10 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A0618 f4562c127817d86f2cfba185fb791165 448 Gene3D G3DSA:3.40.50.2300 1 142 6.1E-15 T 15-10-2018 VIBNI_A0618 f4562c127817d86f2cfba185fb791165 448 SUPERFAMILY SSF52172 1 138 6.12E-15 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A0618 f4562c127817d86f2cfba185fb791165 448 SMART SM00448 1 119 1.6E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B0456 f6d60760f1e2d6a0690cfaf05df29b36 371 Gene3D G3DSA:3.40.50.2300 55 329 1.2E-96 T 15-10-2018 VIBNI_B0456 f6d60760f1e2d6a0690cfaf05df29b36 371 Pfam PF13407 Periplasmic binding protein domain 56 313 1.6E-37 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B0456 f6d60760f1e2d6a0690cfaf05df29b36 371 Gene3D G3DSA:3.40.50.2300 161 340 1.2E-96 T 15-10-2018 VIBNI_B0456 f6d60760f1e2d6a0690cfaf05df29b36 371 SUPERFAMILY SSF53822 55 343 8.25E-55 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B1206 bd260d17524b372e1f74eb094b2d36b0 256 Gene3D G3DSA:1.10.260.40 2 75 2.9E-5 T 15-10-2018 VIBNI_B1206 bd260d17524b372e1f74eb094b2d36b0 256 Pfam PF01381 Helix-turn-helix 13 65 3.9E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1206 bd260d17524b372e1f74eb094b2d36b0 256 SMART SM00530 12 67 0.0011 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VIBNI_B1206 bd260d17524b372e1f74eb094b2d36b0 256 SUPERFAMILY SSF47413 7 73 4.44E-7 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_A0921 450367503a44b07a24ab93944014a5d6 153 Pfam PF02391 MoaE protein 6 119 8.5E-38 T 15-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VIBNI_A0921 450367503a44b07a24ab93944014a5d6 153 Gene3D G3DSA:3.90.1170.40 1 148 3.0E-54 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VIBNI_A0921 450367503a44b07a24ab93944014a5d6 153 SUPERFAMILY SSF54690 4 148 9.15E-55 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VIBNI_A2754 f75bbd7a528a2c5ebbedef7dfe0dfc32 197 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 148 2.0E-17 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A2874 fe0d86005a5cf6bd81e457bfc63c312a 258 Pfam PF13503 Domain of unknown function (DUF4123) 33 122 1.2E-15 T 15-10-2018 IPR025391 Domain of unknown function DUF4123 VIBNI_A0130 5d30a9dcb324cb9360d6f998b1a03677 94 Pfam PF04977 Septum formation initiator 11 88 1.4E-24 T 15-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VIBNI_A0130 5d30a9dcb324cb9360d6f998b1a03677 94 Gene3D G3DSA:1.20.5.400 12 63 4.2E-7 T 15-10-2018 VIBNI_A0130 5d30a9dcb324cb9360d6f998b1a03677 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.01 T 15-10-2018 IPR023081 Cell division protein FtsB VIBNI_A3878 4fba428343c47c3a6dbbdd798fcbfcc5 488 SUPERFAMILY SSF48452 79 172 1.49E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3878 4fba428343c47c3a6dbbdd798fcbfcc5 488 Gene3D G3DSA:1.25.40.10 12 193 5.2E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A3878 4fba428343c47c3a6dbbdd798fcbfcc5 488 Pfam PF04575 Protein of unknown function (DUF560) 196 488 1.6E-44 T 15-10-2018 IPR007655 Protein of unknown function DUF560 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.3E-135 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.1E-238 T 15-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 SUPERFAMILY SSF48256 4 428 2.09E-169 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 Gene3D G3DSA:1.10.230.10 268 376 3.4E-150 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 Gene3D G3DSA:2.20.28.60 1 50 1.7E-27 T 15-10-2018 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PIRSF PIRSF001369 38 429 7.0E-174 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 Gene3D G3DSA:1.10.580.10 57 411 3.4E-150 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 219 234 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 241 269 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 296 316 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 359 375 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 165 178 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A2569 2a7f07882e3a1fa50c80a299884981a4 429 PRINTS PR00143 Citrate synthase signature 379 393 3.5E-55 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 Gene3D G3DSA:3.30.1330.60 80 221 3.4E-43 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 SUPERFAMILY SSF103088 98 218 2.75E-36 T 15-10-2018 IPR036737 OmpA-like domain superfamily VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01021 OMPA domain signature 163 179 1.5E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01021 OMPA domain signature 148 163 1.5E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01021 OMPA domain signature 118 140 1.5E-10 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 Pfam PF13488 Glycine zipper 42 86 8.2E-11 T 15-10-2018 IPR039567 Glycine zipper domain VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 Pfam PF00691 OmpA family 118 212 2.3E-23 T 15-10-2018 IPR006665 OmpA-like domain VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 2.3E-5 T 15-10-2018 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 2.3E-5 T 15-10-2018 VIBNI_A1166 16b6510a9be3d1afaec24f6d08a31252 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 2.3E-5 T 15-10-2018 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 Gene3D G3DSA:3.30.860.10 1 92 4.5E-44 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 PIRSF PIRSF002144 1 92 6.0E-32 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.79 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 Pfam PF00203 Ribosomal protein S19 3 83 1.5E-36 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.2E-46 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.6E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.6E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.6E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A3174 7f71a4bdbf0a55d724b00b71f32469cf 92 SUPERFAMILY SSF54570 3 84 9.55E-36 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VIBNI_A1786 e667210ab671749b8d42e8cf30e07df2 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 34.66 T 15-10-2018 IPR009809 Cell division protein ZapC VIBNI_A1786 e667210ab671749b8d42e8cf30e07df2 180 PIRSF PIRSF010252 1 177 9.6E-63 T 15-10-2018 IPR009809 Cell division protein ZapC VIBNI_A1786 e667210ab671749b8d42e8cf30e07df2 180 Pfam PF07126 Cell-division protein ZapC 1 168 3.5E-61 T 15-10-2018 IPR009809 Cell division protein ZapC VIBNI_A2156 1018b71a3be007a5b8a35813d12c1215 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 361 1.2E-56 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3606 c60e8f300861a40c08008ae3b9700815 178 Gene3D G3DSA:3.30.70.1070 98 177 9.9E-27 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A3606 c60e8f300861a40c08008ae3b9700815 178 SUPERFAMILY SSF110997 103 174 1.01E-16 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VIBNI_A3606 c60e8f300861a40c08008ae3b9700815 178 Pfam PF05036 Sporulation related domain 104 173 2.6E-14 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 VIBNI_A3066 10b8e0e56fccd97eae111b4c46748a5a 296 Pfam PF11860 N-acetylmuramidase 127 294 1.7E-60 T 15-10-2018 IPR024408 N-acetylmuramidase VIBNI_B0537 8e3a575412f0647c59ebe03485c31012 301 SUPERFAMILY SSF55486 29 262 1.47E-13 T 15-10-2018 VIBNI_B0537 8e3a575412f0647c59ebe03485c31012 301 Gene3D G3DSA:3.40.390.10 29 261 7.5E-7 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VIBNI_B0537 8e3a575412f0647c59ebe03485c31012 301 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 52 208 4.2E-15 T 15-10-2018 VIBNI_A0402 dec874a2326970d4ff732ae472f2a453 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VIBNI_A0402 dec874a2326970d4ff732ae472f2a453 84 Gene3D G3DSA:3.30.70.20 2 83 9.8E-34 T 15-10-2018 VIBNI_A0402 dec874a2326970d4ff732ae472f2a453 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 1.5E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VIBNI_A0402 dec874a2326970d4ff732ae472f2a453 84 SUPERFAMILY SSF54862 5 72 7.07E-17 T 15-10-2018 VIBNI_A0439 086631891f083b51c7b7798c3d8e256b 279 Gene3D G3DSA:3.40.50.970 2 278 9.1E-82 T 15-10-2018 VIBNI_A0439 086631891f083b51c7b7798c3d8e256b 279 SUPERFAMILY SSF52518 7 275 2.85E-72 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold VIBNI_A0439 086631891f083b51c7b7798c3d8e256b 279 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 23 268 5.3E-34 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 SUPERFAMILY SSF50494 25 266 1.57E-58 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 Gene3D G3DSA:2.40.10.10 20 267 2.6E-57 T 15-10-2018 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 Pfam PF00089 Trypsin 27 261 8.2E-48 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 SMART SM00020 26 261 4.8E-57 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 212 223 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 3.9E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 211 223 3.9E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0091 d7d58b0ed52da5fc9fa61648e1043b53 269 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 3.9E-12 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A2875 b22926b74f7433f956ec3899735b51ba 152 Gene3D G3DSA:2.60.200.60 54 95 3.1E-13 T 15-10-2018 VIBNI_A2875 b22926b74f7433f956ec3899735b51ba 152 Gene3D G3DSA:2.60.200.60 1 53 4.4E-13 T 15-10-2018 VIBNI_A2875 b22926b74f7433f956ec3899735b51ba 152 Pfam PF05488 PAAR motif 2 51 5.2E-13 T 15-10-2018 IPR008727 PAAR motif VIBNI_A2875 b22926b74f7433f956ec3899735b51ba 152 Pfam PF05488 PAAR motif 19 86 2.1E-22 T 15-10-2018 IPR008727 PAAR motif VIBNI_A3746 368e8dc6623504f62cbe59e4990f798e 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 1.2E-22 T 15-10-2018 IPR019635 Protein of unknown function DUF2500 VIBNI_A3746 368e8dc6623504f62cbe59e4990f798e 109 Gene3D G3DSA:2.40.50.660 32 109 6.4E-8 T 15-10-2018 VIBNI_B0791 e04338b639dd9a64632f76ff1d27c122 164 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.6E-21 T 15-10-2018 VIBNI_B0791 e04338b639dd9a64632f76ff1d27c122 164 Gene3D G3DSA:3.40.630.30 1 164 3.3E-49 T 15-10-2018 VIBNI_B0791 e04338b639dd9a64632f76ff1d27c122 164 SUPERFAMILY SSF55729 1 162 1.18E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1794 ab57df4036aa5ac07979913a05306548 321 Gene3D G3DSA:3.40.50.2300 28 290 9.1E-86 T 15-10-2018 VIBNI_B1794 ab57df4036aa5ac07979913a05306548 321 Gene3D G3DSA:3.40.50.2300 128 270 9.1E-86 T 15-10-2018 VIBNI_B1794 ab57df4036aa5ac07979913a05306548 321 Pfam PF13407 Periplasmic binding protein domain 27 290 3.1E-49 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B1794 ab57df4036aa5ac07979913a05306548 321 SUPERFAMILY SSF53822 24 315 1.03E-65 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A3231 d1411e1ff1ddcc72b0f29523909b30cb 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 221 4.9E-35 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VIBNI_A3231 d1411e1ff1ddcc72b0f29523909b30cb 237 Gene3D G3DSA:3.20.20.190 1 228 3.3E-62 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_A3231 d1411e1ff1ddcc72b0f29523909b30cb 237 SUPERFAMILY SSF51695 2 228 4.19E-58 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_A2808 f233f21c88124fd664b5495ba99783cd 340 SUPERFAMILY SSF56935 22 340 4.88E-52 T 15-10-2018 VIBNI_A2808 f233f21c88124fd664b5495ba99783cd 340 Pfam PF13609 Gram-negative porin 9 315 7.7E-30 T 15-10-2018 VIBNI_A2808 f233f21c88124fd664b5495ba99783cd 340 Gene3D G3DSA:2.40.160.10 22 340 1.7E-61 T 15-10-2018 IPR023614 Porin domain superfamily VIBNI_B2074 6fd6e164109011c9ef4b11e044d70303 128 SUPERFAMILY SSF55298 7 127 2.04E-26 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B2074 6fd6e164109011c9ef4b11e044d70303 128 Pfam PF01042 Endoribonuclease L-PSP 16 126 8.3E-19 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_B2074 6fd6e164109011c9ef4b11e044d70303 128 Gene3D G3DSA:3.30.1330.40 10 128 4.0E-26 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0682 0f9619543bd6a20856bf5aa662d9ff8c 442 Pfam PF00263 Bacterial type II and III secretion system protein 241 394 3.3E-37 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 VIBNI_B0682 0f9619543bd6a20856bf5aa662d9ff8c 442 Pfam PF13629 Pilus formation protein N terminal region 26 94 7.9E-19 T 15-10-2018 IPR032789 Pilus formation protein, N-terminal VIBNI_B0682 0f9619543bd6a20856bf5aa662d9ff8c 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 359 377 4.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_B0682 0f9619543bd6a20856bf5aa662d9ff8c 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 187 197 4.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family VIBNI_B1914 732b29c5b6fc8d365bbec86326385d9e 348 Gene3D G3DSA:1.10.287.950 73 348 1.9E-40 T 15-10-2018 VIBNI_B1914 732b29c5b6fc8d365bbec86326385d9e 348 SUPERFAMILY SSF58104 83 344 4.58E-42 T 15-10-2018 VIBNI_B1914 732b29c5b6fc8d365bbec86326385d9e 348 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 318 1.0E-27 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1914 732b29c5b6fc8d365bbec86326385d9e 348 SMART SM00283 100 342 1.0E-13 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B1254 1870a6da0c1c0eeb49a96fd8149c8044 323 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 311 4.3E-103 T 15-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VIBNI_B1254 1870a6da0c1c0eeb49a96fd8149c8044 323 Pfam PF03741 Integral membrane protein TerC family 79 279 3.8E-54 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VIBNI_B2037 f857d5fc9a793744050cdda5a7d5ae42 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 303 5.4E-36 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 SUPERFAMILY SSF52540 18 317 1.72E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 Pfam PF12592 Protein of unknown function (DUF3763) 482 534 7.3E-20 T 15-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 9.7E-24 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 Gene3D G3DSA:3.40.50.300 8 228 3.9E-60 T 15-10-2018 VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 Gene3D G3DSA:1.10.8.300 229 300 2.6E-26 T 15-10-2018 VIBNI_B0915 a49e4e7d2f2681f7eabcfbcddcd31ae8 552 SMART SM00382 46 189 3.0E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2957 36d0b6ed7a756a706f58a447c8c204ff 321 Gene3D G3DSA:1.20.1420.30 35 308 6.8E-86 T 15-10-2018 VIBNI_A2957 36d0b6ed7a756a706f58a447c8c204ff 321 Pfam PF01699 Sodium/calcium exchanger protein 5 142 5.1E-27 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VIBNI_A2957 36d0b6ed7a756a706f58a447c8c204ff 321 Pfam PF01699 Sodium/calcium exchanger protein 177 313 7.1E-29 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VIBNI_A2957 36d0b6ed7a756a706f58a447c8c204ff 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 3.8E-81 T 15-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VIBNI_A2957 36d0b6ed7a756a706f58a447c8c204ff 321 Gene3D G3DSA:1.20.58.1130 9 206 6.8E-86 T 15-10-2018 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 PIRSF PIRSF002096 1 134 3.1E-53 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 SUPERFAMILY SSF81273 2 58 3.53E-17 T 15-10-2018 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 Gene3D G3DSA:1.10.287.1050 1 84 2.9E-31 T 15-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 SUPERFAMILY SSF81273 92 134 4.32E-9 T 15-10-2018 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 Gene3D G3DSA:4.10.430.10 92 134 4.8E-21 T 15-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 Pfam PF00816 H-NS histone family 35 128 8.0E-20 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VIBNI_A2294 66cf743501cf436e13ee1606c8b6168b 134 SMART SM00528 88 134 2.3E-22 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 Pfam PF13437 HlyD family secretion protein 263 384 2.4E-8 T 15-10-2018 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 1.8E-21 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 1.8E-21 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 1.8E-21 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 396 411 1.8E-21 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_B1808 38f94217bcc258d3adad964723195f6d 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 381 396 1.8E-21 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VIBNI_A2515 efa315191624acb66dcad70110f9bfe7 148 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 9.0E-49 T 15-10-2018 IPR003791 Protein of unknown function UPF0178 VIBNI_A2515 efa315191624acb66dcad70110f9bfe7 148 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.285 T 15-10-2018 IPR003791 Protein of unknown function UPF0178 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 9.2E-56 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 SMART SM00477 41 232 3.3E-58 T 15-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 15-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 Gene3D G3DSA:3.40.570.10 13 244 7.1E-72 T 15-10-2018 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 SUPERFAMILY SSF54060 32 240 2.35E-70 T 15-10-2018 VIBNI_A2524 74daa378aeb3c3aaf08e43fb71a774d1 250 SMART SM00892 40 232 3.3E-63 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 Gene3D G3DSA:3.40.50.1100 53 383 3.8E-182 T 15-10-2018 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 PIRSF PIRSF001413 1 395 3.0E-168 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 1.2E-192 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 Gene3D G3DSA:3.40.50.1100 9 204 3.8E-182 T 15-10-2018 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 SUPERFAMILY SSF53686 5 389 6.42E-142 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 374 7.2E-50 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.821 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A1272 f1bfed202fe2cfbf8f0c636b4c66d538 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 SUPERFAMILY SSF53850 89 278 2.53E-14 T 15-10-2018 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.3E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 Gene3D G3DSA:1.10.10.10 1 84 3.5E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 Pfam PF03466 LysR substrate binding domain 94 276 2.1E-9 T 15-10-2018 IPR005119 LysR, substrate-binding VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 SUPERFAMILY SSF46785 1 82 2.49E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_A3420 c267f3c76f1f0846d69779ba97856e75 295 Gene3D G3DSA:3.40.190.290 126 277 1.1E-6 T 15-10-2018 VIBNI_B1249 6ff42810521ee8c455b137ec35ebc93b 199 SUPERFAMILY SSF52317 1 191 5.58E-46 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1249 6ff42810521ee8c455b137ec35ebc93b 199 Gene3D G3DSA:3.40.50.880 1 198 4.8E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1249 6ff42810521ee8c455b137ec35ebc93b 199 Pfam PF01965 DJ-1/PfpI family 3 172 1.5E-24 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VIBNI_A2993 ab07fd2633db8fd609d6df0365abae5a 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 2.5E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2993 ab07fd2633db8fd609d6df0365abae5a 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.9E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2993 ab07fd2633db8fd609d6df0365abae5a 165 Gene3D G3DSA:3.30.700.10 11 162 5.9E-6 T 15-10-2018 VIBNI_A2993 ab07fd2633db8fd609d6df0365abae5a 165 SUPERFAMILY SSF54523 11 121 8.63E-9 T 15-10-2018 VIBNI_A3675 4f4db491626865186068f88d5c201194 338 Pfam PF02706 Chain length determinant protein 24 126 1.4E-17 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VIBNI_A3675 4f4db491626865186068f88d5c201194 338 Pfam PF13807 G-rich domain on putative tyrosine kinase 253 316 2.4E-8 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain VIBNI_A1898 66ba8e44e883d8a6c4eb19e7a58dbc78 338 Gene3D G3DSA:3.40.710.10 6 334 2.2E-54 T 15-10-2018 VIBNI_A1898 66ba8e44e883d8a6c4eb19e7a58dbc78 338 SUPERFAMILY SSF56601 9 314 1.03E-48 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A1898 66ba8e44e883d8a6c4eb19e7a58dbc78 338 Pfam PF00144 Beta-lactamase 22 316 5.5E-39 T 15-10-2018 IPR001466 Beta-lactamase-related VIBNI_A0066 677546e66e734adb85b2faf296c6113b 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 83 196 1.2E-24 T 15-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VIBNI_A1915 01b57c26186e1a12a8eacde4a3aecd4b 181 Pfam PF16964 Putative tight adherence pilin protein F 3 165 5.6E-24 T 15-10-2018 IPR031582 Putative tight adherence pilin protein F VIBNI_A1906 549a3d8a3696199803ebc322dfcd1536 306 SUPERFAMILY SSF161098 55 281 4.32E-65 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1906 549a3d8a3696199803ebc322dfcd1536 306 Gene3D G3DSA:1.10.3720.10 51 294 1.7E-73 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1906 549a3d8a3696199803ebc322dfcd1536 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 295 3.4E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A1073 0db93f66173504b61144c17457f1d42d 402 Pfam PF02687 FtsX-like permease family 296 395 1.5E-12 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VIBNI_A1073 0db93f66173504b61144c17457f1d42d 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 1.4E-132 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VIBNI_A1073 0db93f66173504b61144c17457f1d42d 402 Pfam PF12704 MacB-like periplasmic core domain 27 209 5.9E-16 T 15-10-2018 IPR025857 MacB-like periplasmic core domain VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 SUPERFAMILY SSF102114 37 361 2.09E-54 T 15-10-2018 VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 Pfam PF04055 Radical SAM superfamily 81 220 1.8E-8 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 Gene3D G3DSA:3.20.20.70 7 364 5.7E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 6.9E-25 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 SMART SM00876 256 359 8.7E-35 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VIBNI_A3813 fe8810761c2d913655bc310c16c47bdc 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 6.1E-175 T 15-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VIBNI_B0020 6fe540b316754d3efb6ffb0836768ce0 114 PIRSF PIRSF002599 6 113 6.9E-17 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 VIBNI_B0020 6fe540b316754d3efb6ffb0836768ce0 114 Pfam PF06961 Protein of unknown function (DUF1294) 32 86 3.8E-25 T 15-10-2018 IPR010718 Protein of unknown function DUF1294 VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 Pfam PF00912 Transglycosylase 81 237 3.2E-46 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 Pfam PF00905 Penicillin binding protein transpeptidase domain 314 569 9.3E-15 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 SUPERFAMILY SSF53955 43 268 1.24E-56 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 Gene3D G3DSA:3.40.710.10 280 618 1.3E-64 T 15-10-2018 VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 Gene3D G3DSA:1.10.3810.10 75 260 4.5E-52 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 SUPERFAMILY SSF56601 219 625 1.81E-83 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_A3630 dff504837b67bca23ebb56bbdd70422d 731 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 625 1.5E-192 T 15-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 Pfam PF00089 Trypsin 32 255 8.5E-52 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 SUPERFAMILY SSF50494 20 258 6.42E-66 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 68 73 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 Gene3D G3DSA:2.40.10.10 24 260 1.2E-59 T 15-10-2018 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 207 219 1.2E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 58 73 1.2E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 1.2E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 208 219 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_B0222 3d9dc0347dad39620afc19afade42ea4 331 SMART SM00020 31 255 1.4E-62 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_B1679 6b470483fbd44f2c0ef27d8451880e02 148 Pfam PF04191 Phospholipid methyltransferase 35 137 2.3E-18 T 15-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VIBNI_B1679 6b470483fbd44f2c0ef27d8451880e02 148 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 110 148 3.0E-4 T 15-10-2018 VIBNI_B1679 6b470483fbd44f2c0ef27d8451880e02 148 Gene3D G3DSA:1.20.120.1630 2 148 2.3E-26 T 15-10-2018 VIBNI_A1377 dafcca5e93b98b5effd1b9bf59d770c6 225 Pfam PF03070 TENA/THI-4/PQQC family 11 217 4.5E-45 T 15-10-2018 IPR004305 Thiaminase-2/PQQC VIBNI_A1377 dafcca5e93b98b5effd1b9bf59d770c6 225 SUPERFAMILY SSF48613 3 216 6.04E-68 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VIBNI_A1377 dafcca5e93b98b5effd1b9bf59d770c6 225 Gene3D G3DSA:1.20.910.10 1 221 4.9E-64 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VIBNI_A1377 dafcca5e93b98b5effd1b9bf59d770c6 225 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 6.1E-43 T 15-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 VIBNI_A2656 911803e26b2fa02aaacbed20fcbd2d40 111 Pfam PF11196 Protein of unknown function (DUF2834) 4 98 2.4E-24 T 15-10-2018 IPR021362 Protein of unknown function DUF2834 VIBNI_A2923 2c2ffb28ce4f0d2de9973f0e26669345 255 Pfam PF06738 Putative threonine/serine exporter 10 247 3.4E-64 T 15-10-2018 IPR010619 Putative threonine/serine exporter VIBNI_A3265 31fa2b7ba5ad92435936fecd94da24f2 96 Gene3D G3DSA:3.30.2310.20 1 95 1.5E-29 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VIBNI_A3265 31fa2b7ba5ad92435936fecd94da24f2 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 2.7E-13 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VIBNI_A3265 31fa2b7ba5ad92435936fecd94da24f2 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 5.3E-11 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VIBNI_A3265 31fa2b7ba5ad92435936fecd94da24f2 96 SUPERFAMILY SSF143011 1 82 3.66E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VIBNI_A1432 59a7016df2b7b8b364b9c8a993c97da1 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 136 7.5E-42 T 15-10-2018 IPR017748 T6S-associated protein TagF VIBNI_A1432 59a7016df2b7b8b364b9c8a993c97da1 231 Gene3D G3DSA:3.40.1730.10 8 230 7.1E-66 T 15-10-2018 IPR038225 T6S-associated protein TagF superfamily VIBNI_A1432 59a7016df2b7b8b364b9c8a993c97da1 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 136 2.9E-45 T 15-10-2018 IPR017748 T6S-associated protein TagF VIBNI_A1432 59a7016df2b7b8b364b9c8a993c97da1 231 PIRSF PIRSF029287 4 229 3.5E-38 T 15-10-2018 IPR017748 T6S-associated protein TagF VIBNI_A1449 1034ea35a6d3bda80a120e228f7ddc3e 161 Pfam PF07348 Syd protein (SUKH-2) 3 153 2.1E-16 T 15-10-2018 IPR009948 Syd GO:0009898 VIBNI_A1449 1034ea35a6d3bda80a120e228f7ddc3e 161 Gene3D G3DSA:3.40.1580.20 1 157 1.3E-10 T 15-10-2018 IPR038228 Syd superfamily VIBNI_B1535 4326bad48e9070750a01b4d417993502 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 295 1.6E-11 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1535 4326bad48e9070750a01b4d417993502 312 Gene3D G3DSA:1.10.3720.10 61 301 3.3E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1535 4326bad48e9070750a01b4d417993502 312 SUPERFAMILY SSF161098 66 293 1.57E-53 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1917 23f74c27e92625d02aeec11b5136f1cb 359 Pfam PF11667 Putative zincin peptidase 152 241 3.6E-6 T 15-10-2018 IPR021683 Putative zincin peptidase VIBNI_B2157 80abe70c750765489745b15ec92092e4 325 SUPERFAMILY SSF81345 2 321 1.44E-78 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B2157 80abe70c750765489745b15ec92092e4 325 Pfam PF01032 FecCD transport family 16 321 4.3E-92 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B2157 80abe70c750765489745b15ec92092e4 325 Gene3D G3DSA:1.10.3470.10 4 324 1.5E-92 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B1687 6ffdac4b493205ab1de9fe645a90856b 291 SUPERFAMILY SSF161098 17 291 7.01E-64 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1687 6ffdac4b493205ab1de9fe645a90856b 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 283 6.7E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1687 6ffdac4b493205ab1de9fe645a90856b 291 Gene3D G3DSA:1.10.3720.10 11 283 1.2E-59 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3635 18314c5fcffc0158f54d986af901e5bf 315 Gene3D G3DSA:3.40.50.720 2 312 4.4E-61 T 15-10-2018 VIBNI_A3635 18314c5fcffc0158f54d986af901e5bf 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 223 1.1E-34 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VIBNI_A3635 18314c5fcffc0158f54d986af901e5bf 315 SUPERFAMILY SSF51735 2 311 1.32E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B2039 33fceb6d35f086dfb4764be76b42f1cc 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 1.1E-112 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B2039 33fceb6d35f086dfb4764be76b42f1cc 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 417 2.5E-133 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B2039 33fceb6d35f086dfb4764be76b42f1cc 423 PIRSF PIRSF006066 1 423 2.2E-138 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1213 b2d863b22de0a885dbab20708e713041 178 Pfam PF13302 Acetyltransferase (GNAT) domain 4 141 2.0E-17 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1213 b2d863b22de0a885dbab20708e713041 178 SUPERFAMILY SSF55729 3 166 2.7E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1213 b2d863b22de0a885dbab20708e713041 178 Gene3D G3DSA:3.40.630.30 2 178 1.5E-35 T 15-10-2018 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 317 3.6E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 PRINTS PR00344 Bacterial sensor protein C-terminal signature 249 263 3.6E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 277 3.6E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 298 3.6E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 SUPERFAMILY SSF55874 162 317 1.3E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 Gene3D G3DSA:1.10.287.130 47 162 9.8E-21 T 15-10-2018 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 Gene3D G3DSA:3.30.565.10 171 319 7.9E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 211 317 4.2E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 SUPERFAMILY SSF47384 64 101 5.69E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 SMART SM00387 208 319 3.1E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VIBNI_B0892 c16e417f9eb446a8deddaa286b99a888 319 Pfam PF00512 His Kinase A (phospho-acceptor) domain 71 139 7.9E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VIBNI_A3792 0de38c91375331e8cdab7bd9032617ba 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 162 4.3E-24 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A3840 7661fa99a4a4e2bc078a743e7eda5362 481 Pfam PF02386 Cation transport protein 63 475 1.5E-50 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VIBNI_A3840 7661fa99a4a4e2bc078a743e7eda5362 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 7.5E-111 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VIBNI_A3840 7661fa99a4a4e2bc078a743e7eda5362 481 PIRSF PIRSF006247 1 481 9.7E-165 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VIBNI_A2472 a6dd5fe8527c69d9ab3ccf5cfdbc4d93 281 Gene3D G3DSA:3.60.20.10 1 258 1.4E-98 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2472 a6dd5fe8527c69d9ab3ccf5cfdbc4d93 281 SUPERFAMILY SSF56235 2 253 2.4E-51 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A2472 a6dd5fe8527c69d9ab3ccf5cfdbc4d93 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 6.5E-114 T 15-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VIBNI_A3766 33bc7fc3462c3e02b6f0c1f0272164a6 234 Pfam PF04340 Protein of unknown function, DUF484 6 220 2.6E-68 T 15-10-2018 IPR007435 Protein of unknown function DUF484 VIBNI_A3766 33bc7fc3462c3e02b6f0c1f0272164a6 234 Gene3D G3DSA:3.30.450.40 43 219 2.5E-37 T 15-10-2018 IPR029016 GAF-like domain superfamily VIBNI_B1987 3361c1636e9204ce70347d0b560214c9 164 SUPERFAMILY SSF48452 2 94 2.09E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1851 fd904a281ff4e8f2c94765b68b92799c 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 423 2.2E-82 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B1851 fd904a281ff4e8f2c94765b68b92799c 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 429 4.5E-113 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_B1851 fd904a281ff4e8f2c94765b68b92799c 435 PIRSF PIRSF006066 5 435 3.0E-91 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3568 7d5a0d4a61291f5fc1fb6805d7221551 620 SUPERFAMILY SSF51197 335 599 2.01E-14 T 15-10-2018 VIBNI_A3568 7d5a0d4a61291f5fc1fb6805d7221551 620 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 348 597 3.8E-12 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VIBNI_A3568 7d5a0d4a61291f5fc1fb6805d7221551 620 Gene3D G3DSA:3.60.130.10 314 609 1.0E-37 T 15-10-2018 VIBNI_A3568 7d5a0d4a61291f5fc1fb6805d7221551 620 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 39 289 9.7E-61 T 15-10-2018 IPR007817 Pyoverdine biosynthesis VIBNI_A1618 a79ab6155fc53bcd7d93b7737847d711 169 Gene3D G3DSA:3.90.1720.70 1 164 3.9E-13 T 15-10-2018 VIBNI_A1618 a79ab6155fc53bcd7d93b7737847d711 169 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 33 166 1.1E-29 T 15-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 VIBNI_B0727 e846b5799e7d07289797d8e54c8d2697 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 276 3.7E-22 T 15-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VIBNI_B0727 e846b5799e7d07289797d8e54c8d2697 318 Pfam PF01548 Transposase 11 151 2.5E-16 T 15-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VIBNI_B1334 9a4a19382ae27ffef13e2d1d7c1d1d4c 464 Pfam PF04932 O-Antigen ligase 245 383 8.9E-19 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_B0297 b8af6336cd609719268170f840e6a58e 478 SUPERFAMILY SSF56601 164 475 3.38E-60 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VIBNI_B0297 b8af6336cd609719268170f840e6a58e 478 Gene3D G3DSA:3.40.710.10 140 472 7.8E-61 T 15-10-2018 VIBNI_B0297 b8af6336cd609719268170f840e6a58e 478 Pfam PF00144 Beta-lactamase 182 455 2.2E-25 T 15-10-2018 IPR001466 Beta-lactamase-related VIBNI_A2397 4a02f1bee1cfffb2d1bb70dd0d54f86d 264 SMART SM00382 31 226 3.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A2397 4a02f1bee1cfffb2d1bb70dd0d54f86d 264 Pfam PF00005 ABC transporter 22 177 1.7E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A2397 4a02f1bee1cfffb2d1bb70dd0d54f86d 264 SUPERFAMILY SSF52540 2 233 3.02E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2397 4a02f1bee1cfffb2d1bb70dd0d54f86d 264 Gene3D G3DSA:3.40.50.300 1 254 1.3E-53 T 15-10-2018 VIBNI_A2397 4a02f1bee1cfffb2d1bb70dd0d54f86d 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 SUPERFAMILY SSF52255 2 158 1.96E-66 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 PIRSF PIRSF001338 1 160 2.1E-68 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 6.7E-67 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.396 T 15-10-2018 IPR033747 Class I PurE VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 SMART SM01001 1 152 4.5E-103 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 Pfam PF00731 AIR carboxylase 2 150 1.5E-64 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VIBNI_A3830 28ee8f0b72030d5f48ee35e84649d37f 161 Gene3D G3DSA:3.40.50.7700 1 161 1.3E-72 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VIBNI_A2096 00f6ccd43238bd2b2ad7554aa4fba6b9 365 Pfam PF05128 Domain of unknown function (DUF697) 236 356 9.6E-8 T 15-10-2018 IPR021147 Protein of unknown function DUF697 VIBNI_A2096 00f6ccd43238bd2b2ad7554aa4fba6b9 365 Gene3D G3DSA:3.40.50.300 11 219 3.1E-18 T 15-10-2018 VIBNI_A2096 00f6ccd43238bd2b2ad7554aa4fba6b9 365 SUPERFAMILY SSF52540 21 201 1.26E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2096 00f6ccd43238bd2b2ad7554aa4fba6b9 365 Pfam PF01926 50S ribosome-binding GTPase 33 142 9.9E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A2936 f5d02a0c3234628987ece20657fb661a 245 Pfam PF00849 RNA pseudouridylate synthase 23 169 6.5E-31 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2936 f5d02a0c3234628987ece20657fb661a 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_A2936 f5d02a0c3234628987ece20657fb661a 245 Gene3D G3DSA:3.30.2350.10 4 217 1.5E-68 T 15-10-2018 VIBNI_A2936 f5d02a0c3234628987ece20657fb661a 245 SUPERFAMILY SSF55120 15 220 5.28E-63 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VIBNI_B1773 533360559e9ee91361ce56c0d40f2fb7 129 Pfam PF04134 Protein of unknown function, DUF393 5 112 1.6E-21 T 15-10-2018 IPR007263 Protein of unknown function DUF393 VIBNI_B1773 533360559e9ee91361ce56c0d40f2fb7 129 SUPERFAMILY SSF52833 1 43 9.27E-5 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B1037 4265a062d07b06580b35eb50eeaf4963 144 Pfam PF03891 Domain of unknown function (DUF333) 33 78 5.7E-21 T 15-10-2018 IPR005590 Protein of unknown function DUF333 VIBNI_B1037 4265a062d07b06580b35eb50eeaf4963 144 Pfam PF03891 Domain of unknown function (DUF333) 92 138 2.5E-21 T 15-10-2018 IPR005590 Protein of unknown function DUF333 VIBNI_B0146 7bab14c4cea7470fc3a250bced886ba5 270 Pfam PF11060 Protein of unknown function (DUF2861) 20 264 7.0E-75 T 15-10-2018 IPR021290 Protein of unknown function DUF2861 VIBNI_B1389 b7548e82e04e41215e2a481976b27d6f 126 SUPERFAMILY SSF47175 21 117 1.53E-20 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VIBNI_B1389 b7548e82e04e41215e2a481976b27d6f 126 Gene3D G3DSA:1.20.120.10 20 117 1.8E-7 T 15-10-2018 VIBNI_B1389 b7548e82e04e41215e2a481976b27d6f 126 Pfam PF07361 Cytochrome b562 21 117 2.5E-24 T 15-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VIBNI_A3195 92e41bf300a364d9a33fd03740c4f67f 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 3.1E-30 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VIBNI_A3195 92e41bf300a364d9a33fd03740c4f67f 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 54 1.1E-21 T 15-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VIBNI_A2074 4fd4199622e3d165ad8e4eebdd9c1903 161 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 4.2E-10 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2074 4fd4199622e3d165ad8e4eebdd9c1903 161 SUPERFAMILY SSF55729 5 160 7.15E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2074 4fd4199622e3d165ad8e4eebdd9c1903 161 Gene3D G3DSA:3.40.630.30 2 161 3.7E-45 T 15-10-2018 VIBNI_A1929 573a82c7f76cac2395c43abce6590018 384 Gene3D G3DSA:3.40.190.170 54 374 6.0E-61 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1929 573a82c7f76cac2395c43abce6590018 384 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 83 346 5.4E-45 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0415 22e4d7e240071388acf96c644c586c8c 296 Gene3D G3DSA:1.10.3720.10 52 294 5.9E-68 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0415 22e4d7e240071388acf96c644c586c8c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 290 2.7E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0415 22e4d7e240071388acf96c644c586c8c 296 SUPERFAMILY SSF161098 57 281 1.44E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 Gene3D G3DSA:3.30.540.10 7 319 4.1E-124 T 15-10-2018 VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.4E-126 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 SUPERFAMILY SSF56655 1 324 5.68E-104 T 15-10-2018 VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 PIRSF PIRSF004532 1 331 4.6E-133 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 Gene3D G3DSA:3.40.190.90 109 276 4.1E-124 T 15-10-2018 VIBNI_A3612 90962abc8c93553de5e2357f3588d2fd 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 5.9E-165 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 SMART SM00729 104 327 0.0083 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.866 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 Pfam PF04055 Radical SAM superfamily 109 283 4.5E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 SUPERFAMILY SSF102114 105 334 4.45E-13 T 15-10-2018 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 5.2E-158 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 PIRSF PIRSF006004 3 365 1.5E-142 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 Gene3D G3DSA:1.10.150.530 5 67 7.2E-25 T 15-10-2018 VIBNI_A2778 4b7fd97ba96587485cf374db8edad581 372 Gene3D G3DSA:3.20.20.70 68 338 3.1E-111 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1117 69687be8eaa0cb89051c1edc1ef9c170 341 SUPERFAMILY SSF161098 107 321 7.85E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1117 69687be8eaa0cb89051c1edc1ef9c170 341 Gene3D G3DSA:1.10.3720.10 102 332 2.3E-19 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1117 69687be8eaa0cb89051c1edc1ef9c170 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 4.3E-35 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 Gene3D G3DSA:2.40.10.10 21 261 1.0E-60 T 15-10-2018 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 Pfam PF00089 Trypsin 29 255 2.4E-52 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 Gene3D G3DSA:2.60.40.10 273 373 5.1E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 68 73 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 SMART SM00020 28 256 6.0E-63 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 114 128 6.1E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 206 218 6.1E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 58 73 6.1E-14 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 207 218 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VIBNI_A3366 58b1e248d36261bf077b6efb70c554d5 439 SUPERFAMILY SSF50494 23 260 1.44E-62 T 15-10-2018 IPR009003 Peptidase S1, PA clan VIBNI_A1385 b49b15f45faa04d443cb6af7b6f88992 301 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 54 280 2.4E-106 T 15-10-2018 IPR022488 Polyphosphate kinase-2-related VIBNI_A1385 b49b15f45faa04d443cb6af7b6f88992 301 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 54 281 4.4E-115 T 15-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 VIBNI_A1385 b49b15f45faa04d443cb6af7b6f88992 301 SUPERFAMILY SSF52540 85 271 2.11E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1385 b49b15f45faa04d443cb6af7b6f88992 301 Gene3D G3DSA:3.40.50.300 14 301 8.3E-101 T 15-10-2018 VIBNI_A1385 b49b15f45faa04d443cb6af7b6f88992 301 PIRSF PIRSF028756 6 300 4.6E-123 T 15-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 VIBNI_B0502 822971f66308ae057e53ee694e8e6c39 141 Pfam PF13275 S4 domain 13 75 8.4E-24 T 15-10-2018 VIBNI_B0502 822971f66308ae057e53ee694e8e6c39 141 Gene3D G3DSA:3.10.290.10 5 77 4.8E-23 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VIBNI_B0502 822971f66308ae057e53ee694e8e6c39 141 SUPERFAMILY SSF55174 4 76 1.31E-18 T 15-10-2018 VIBNI_B1167 e65502ff9d3d2d2122049fd7d6a0f8c2 188 SUPERFAMILY SSF50630 53 184 1.59E-39 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_B1167 e65502ff9d3d2d2122049fd7d6a0f8c2 188 Pfam PF05618 Putative ATP-dependant zinc protease 53 186 4.2E-41 T 15-10-2018 VIBNI_B1167 e65502ff9d3d2d2122049fd7d6a0f8c2 188 Gene3D G3DSA:2.40.70.10 50 177 6.9E-38 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily VIBNI_B1084 f783b01f7bee2e65669ae19b32698e7c 185 SMART SM00782 6 52 5.4E-25 T 15-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VIBNI_B1084 f783b01f7bee2e65669ae19b32698e7c 185 Pfam PF03831 PhnA domain 120 184 2.1E-24 T 15-10-2018 IPR013988 PhnA protein, C-terminal VIBNI_B1084 f783b01f7bee2e65669ae19b32698e7c 185 Gene3D G3DSA:2.30.30.40 116 185 9.9E-26 T 15-10-2018 VIBNI_B1084 f783b01f7bee2e65669ae19b32698e7c 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 4.1E-9 T 15-10-2018 IPR013987 PhnA protein, N-terminal VIBNI_B1084 f783b01f7bee2e65669ae19b32698e7c 185 SUPERFAMILY SSF82057 114 184 5.95E-22 T 15-10-2018 VIBNI_B0954 13d2058f066e6338cd273fb3d9cd2695 257 Gene3D G3DSA:1.10.3210.10 65 209 1.4E-11 T 15-10-2018 VIBNI_B0954 13d2058f066e6338cd273fb3d9cd2695 257 Pfam PF01966 HD domain 82 177 7.7E-8 T 15-10-2018 IPR006674 HD domain VIBNI_B0954 13d2058f066e6338cd273fb3d9cd2695 257 SUPERFAMILY SSF109604 81 195 1.34E-12 T 15-10-2018 VIBNI_A3428 83c8084f3c35eaa5387ee43637907aa1 299 Pfam PF00482 Type II secretion system (T2SS), protein F 135 256 1.4E-14 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_A3428 83c8084f3c35eaa5387ee43637907aa1 299 Gene3D G3DSA:1.20.81.30 121 234 1.9E-7 T 15-10-2018 VIBNI_B0805 e4501cffb43479e4214f21c3abe72100 188 Pfam PF01124 MAPEG family 54 178 1.1E-15 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VIBNI_B0805 e4501cffb43479e4214f21c3abe72100 188 SUPERFAMILY SSF161084 46 178 1.01E-23 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_B0805 e4501cffb43479e4214f21c3abe72100 188 Gene3D G3DSA:1.20.120.550 43 188 4.0E-27 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_A2528 a172d26574cf85854e03dcc415bda59c 181 PIRSF PIRSF004982 1 181 2.1E-56 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VIBNI_A2528 a172d26574cf85854e03dcc415bda59c 181 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 157 2.7E-34 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VIBNI_A2528 a172d26574cf85854e03dcc415bda59c 181 Pfam PF03843 Outer membrane lipoprotein Slp family 16 161 3.5E-43 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VIBNI_A0119 b4b0c697bfa3a195e45586b1ec3948c9 416 SUPERFAMILY SSF56935 21 416 2.86E-18 T 15-10-2018 VIBNI_B0879 3498eed03581766fbb95e9949cb70bfc 366 Pfam PF12060 Domain of unknown function (DUF3541) 29 250 2.9E-113 T 15-10-2018 IPR021928 Protein of unknown function DUF3541 VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 Pfam PF12464 Maltose acetyltransferase 6 54 3.6E-7 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 SUPERFAMILY SSF51161 2 180 2.36E-48 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 SMART SM01266 4 55 3.1E-7 T 15-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 90 103 0.067 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 161 8.6E-11 T 15-10-2018 IPR001451 Hexapeptide repeat VIBNI_B0588 63846d45805d3fec526973ca67e8f99a 184 Gene3D G3DSA:2.160.10.10 1 183 1.5E-61 T 15-10-2018 VIBNI_B0495 64e24c4e446bcafd77efd9c382002650 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.3E-32 T 15-10-2018 IPR021230 Protein of unknown function DUF2810 VIBNI_B0495 64e24c4e446bcafd77efd9c382002650 118 Gene3D G3DSA:3.30.1370.150 59 118 5.9E-32 T 15-10-2018 VIBNI_A2811 27b38b64ba27e3f3e8a91f0caa8ab86f 134 Pfam PF04304 Protein of unknown function (DUF454) 15 129 3.2E-29 T 15-10-2018 IPR007401 Protein of unknown function DUF454 VIBNI_A2811 27b38b64ba27e3f3e8a91f0caa8ab86f 134 PIRSF PIRSF016789 14 134 1.3E-29 T 15-10-2018 IPR007401 Protein of unknown function DUF454 VIBNI_B1694 d0ed4b345d8231f02048d08ab275dcfc 340 Gene3D G3DSA:1.10.10.60 234 340 5.0E-25 T 15-10-2018 VIBNI_B1694 d0ed4b345d8231f02048d08ab275dcfc 340 SUPERFAMILY SSF46689 290 339 7.17E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B1694 d0ed4b345d8231f02048d08ab275dcfc 340 Pfam PF12833 Helix-turn-helix domain 260 339 4.3E-19 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B1694 d0ed4b345d8231f02048d08ab275dcfc 340 SMART SM00342 254 337 4.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0488 618dc052a2594b0b924d4ea2fe50a375 261 Gene3D G3DSA:3.40.50.150 8 260 1.5E-28 T 15-10-2018 VIBNI_B0488 618dc052a2594b0b924d4ea2fe50a375 261 SUPERFAMILY SSF53335 115 218 6.45E-7 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0488 618dc052a2594b0b924d4ea2fe50a375 261 Pfam PF03059 Nicotianamine synthase protein 14 260 1.1E-7 T 15-10-2018 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 VIBNI_A0492 def667405bdaaa50617aa502dba8a9cf 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 1.9E-73 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VIBNI_A0492 def667405bdaaa50617aa502dba8a9cf 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.6E-25 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VIBNI_A0492 def667405bdaaa50617aa502dba8a9cf 420 Pfam PF07670 Nucleoside recognition 95 191 1.6E-7 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VIBNI_A0492 def667405bdaaa50617aa502dba8a9cf 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 5.4E-151 T 15-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VIBNI_A2033 7c41f18335f19d79927a9eca8938a84a 217 Pfam PF00753 Metallo-beta-lactamase superfamily 13 194 2.2E-29 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A2033 7c41f18335f19d79927a9eca8938a84a 217 Gene3D G3DSA:3.60.15.10 3 212 1.9E-75 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A2033 7c41f18335f19d79927a9eca8938a84a 217 SMART SM00849 14 194 1.2E-35 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_A2033 7c41f18335f19d79927a9eca8938a84a 217 SUPERFAMILY SSF56281 4 210 9.48E-56 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1425 9c86445a8c4c540681165de43343c1ba 365 Gene3D G3DSA:3.60.15.10 59 351 4.5E-81 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1425 9c86445a8c4c540681165de43343c1ba 365 Pfam PF12706 Beta-lactamase superfamily domain 100 293 1.3E-43 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_B1425 9c86445a8c4c540681165de43343c1ba 365 SUPERFAMILY SSF56281 83 311 1.15E-33 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1425 9c86445a8c4c540681165de43343c1ba 365 PIRSF PIRSF038896 14 345 9.3E-94 T 15-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 VIBNI_A1133 0faf513d04149ecaaba312d0b3a16c81 259 SUPERFAMILY SSF52540 3 233 5.76E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1133 0faf513d04149ecaaba312d0b3a16c81 259 Gene3D G3DSA:3.40.50.300 2 245 1.1E-53 T 15-10-2018 VIBNI_A1133 0faf513d04149ecaaba312d0b3a16c81 259 SMART SM00382 30 227 2.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1133 0faf513d04149ecaaba312d0b3a16c81 259 Pfam PF00005 ABC transporter 21 179 2.0E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A0534 f20754f9e5cf9e74b1e293e08542a9cc 825 SUPERFAMILY SSF49464 647 688 9.02E-7 T 15-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VIBNI_A1392 b6ff1c07ce7cdafbd2f15d60165adc0e 134 PIRSF PIRSF007010 3 134 9.0E-44 T 15-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VIBNI_A1392 b6ff1c07ce7cdafbd2f15d60165adc0e 134 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 19 132 6.1E-38 T 15-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VIBNI_A1392 b6ff1c07ce7cdafbd2f15d60165adc0e 134 Gene3D G3DSA:3.30.300.250 24 134 1.4E-39 T 15-10-2018 VIBNI_B2128 f8bf243ca419ba346f3fe262ed2dee62 505 SUPERFAMILY SSF81342 9 140 9.42E-7 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VIBNI_B2128 f8bf243ca419ba346f3fe262ed2dee62 505 Pfam PF09459 Ethylbenzene dehydrogenase 207 498 2.4E-36 T 15-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 VIBNI_B2128 f8bf243ca419ba346f3fe262ed2dee62 505 SMART SM00887 206 498 6.8E-26 T 15-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 Pfam PF00271 Helicase conserved C-terminal domain 238 342 1.1E-14 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 SMART SM00490 262 344 4.5E-12 T 15-10-2018 IPR001650 Helicase, C-terminal VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 Gene3D G3DSA:3.40.50.300 1 166 1.2E-29 T 15-10-2018 VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 4.7E-23 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 SMART SM00487 1 178 1.2E-14 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 Gene3D G3DSA:3.40.50.300 209 369 1.8E-33 T 15-10-2018 VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 SUPERFAMILY SSF57829 422 464 6.77E-7 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VIBNI_A2212 7142a55789eab813c4fed430bdf25e06 578 SUPERFAMILY SSF52540 48 361 4.86E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2303 93028a73059c6068c09b224e322f3a15 52 Pfam PF10689 Protein of unknown function (DUF2496) 6 48 7.8E-24 T 15-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VIBNI_A2084 7b6e1fde316def7b96f061100508c274 265 Gene3D G3DSA:3.30.460.10 20 122 2.5E-8 T 15-10-2018 VIBNI_A2084 7b6e1fde316def7b96f061100508c274 265 SUPERFAMILY SSF81301 43 122 3.87E-10 T 15-10-2018 VIBNI_A2084 7b6e1fde316def7b96f061100508c274 265 Pfam PF01909 Nucleotidyltransferase domain 41 89 1.4E-7 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VIBNI_B0672 45bd990e36c2ca9838c2d50812bf3767 284 SUPERFAMILY SSF56219 29 280 8.51E-33 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B0672 45bd990e36c2ca9838c2d50812bf3767 284 Gene3D G3DSA:3.60.10.10 32 283 1.1E-41 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VIBNI_B0672 45bd990e36c2ca9838c2d50812bf3767 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 243 4.7E-11 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 2.4E-194 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 Gene3D G3DSA:1.10.10.350 369 473 2.1E-23 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.9E-115 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 SUPERFAMILY SSF52374 3 301 4.83E-108 T 15-10-2018 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.8E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 4.8E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.8E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.8E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 4.8E-27 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 SUPERFAMILY SSF48163 302 465 1.28E-45 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 Gene3D G3DSA:3.40.50.620 2 317 2.2E-133 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A2655 e85fe70d36214a8f8c25250fe2cc6266 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.181 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VIBNI_B1115 9377062513320e07f5605962cd7f0808 446 PIRSF PIRSF002808 12 445 5.4E-102 T 15-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VIBNI_B1115 9377062513320e07f5605962cd7f0808 446 Gene3D G3DSA:1.20.1250.20 20 221 2.8E-37 T 15-10-2018 VIBNI_B1115 9377062513320e07f5605962cd7f0808 446 SUPERFAMILY SSF103473 18 437 8.37E-62 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1115 9377062513320e07f5605962cd7f0808 446 Pfam PF07690 Major Facilitator Superfamily 37 391 7.4E-40 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B1115 9377062513320e07f5605962cd7f0808 446 Gene3D G3DSA:1.20.1250.20 243 443 8.4E-34 T 15-10-2018 VIBNI_B1641 b3600a0861e75a30dca293250b78c228 533 Pfam PF13584 Oxygen tolerance 18 447 4.1E-72 T 15-10-2018 IPR025738 Aerotolerance-related protein BatD VIBNI_B2089 20fa8446716445662d4d779f59345f2e 433 SUPERFAMILY SSF53850 32 429 1.02E-33 T 15-10-2018 VIBNI_B2089 20fa8446716445662d4d779f59345f2e 433 Gene3D G3DSA:3.40.190.10 22 427 2.6E-40 T 15-10-2018 VIBNI_B2089 20fa8446716445662d4d779f59345f2e 433 Pfam PF13416 Bacterial extracellular solute-binding protein 42 322 6.9E-12 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_A3515 98cfeea3b8dccffaba0b7271cc5c8707 139 SUPERFAMILY SSF55166 9 133 5.76E-23 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A3515 98cfeea3b8dccffaba0b7271cc5c8707 139 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 69 133 1.1E-12 T 15-10-2018 IPR039561 Peptidase M15C GO:0008233 VIBNI_A3515 98cfeea3b8dccffaba0b7271cc5c8707 139 Gene3D G3DSA:3.30.1380.10 9 133 1.7E-22 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VIBNI_A0264 add974e08658b084e36dc04613dcf49c 327 Pfam PF14027 Protein of unknown function (DUF4243) 26 302 5.0E-31 T 15-10-2018 IPR025337 Questin oxidase-like GO:0016491 VIBNI_B0446 d6a6379b671e9b4884cb14e380c26653 121 SUPERFAMILY SSF54593 3 120 2.01E-17 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0446 d6a6379b671e9b4884cb14e380c26653 121 Gene3D G3DSA:3.10.180.10 5 121 6.3E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1953 a1fab863ae847ae82404decec3b8cc05 263 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 3 251 2.0E-117 T 15-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 VIBNI_B1953 a1fab863ae847ae82404decec3b8cc05 263 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 240 1.1E-56 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 VIBNI_B1953 a1fab863ae847ae82404decec3b8cc05 263 SUPERFAMILY SSF51621 2 251 1.51E-82 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VIBNI_B1953 a1fab863ae847ae82404decec3b8cc05 263 Gene3D G3DSA:3.20.20.60 1 261 2.7E-92 T 15-10-2018 VIBNI_B0898 202f24d9d4c98cdde5ca8f1eb59a05fa 161 Pfam PF04224 Protein of unknown function, DUF417 18 157 1.5E-28 T 15-10-2018 IPR007339 Inner membrane protein RclC-like VIBNI_B0898 202f24d9d4c98cdde5ca8f1eb59a05fa 161 PIRSF PIRSF028065 5 161 3.6E-58 T 15-10-2018 IPR016865 Inner membrane protein RclC VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 361 7.6E-7 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 33 48 7.6E-7 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 SUPERFAMILY SSF58104 157 466 1.31E-61 T 15-10-2018 VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 SMART SM00283 205 466 2.1E-56 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 Gene3D G3DSA:1.10.287.950 140 466 1.3E-58 T 15-10-2018 VIBNI_A1813 b6c2d0fa366d473e9209163975e8784e 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 253 432 1.0E-35 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_B0935 495d36c989df862cb7d40bd414fdc48d 166 Pfam PF11158 Protein of unknown function (DUF2938) 9 155 4.9E-51 T 15-10-2018 IPR021329 Protein of unknown function DUF2938 VIBNI_A0376 98bcde2b3c872cb1177a2cc06ba53b9a 344 Gene3D G3DSA:2.70.70.10 132 287 1.4E-41 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A0376 98bcde2b3c872cb1177a2cc06ba53b9a 344 SUPERFAMILY SSF51261 90 284 9.42E-52 T 15-10-2018 IPR011055 Duplicated hybrid motif VIBNI_A0376 98bcde2b3c872cb1177a2cc06ba53b9a 344 Pfam PF01551 Peptidase family M23 185 280 7.3E-30 T 15-10-2018 IPR016047 Peptidase M23 VIBNI_A2555 e8ba5211392380161f9f23a5d4e59cb1 76 SUPERFAMILY SSF47336 5 70 3.14E-5 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A2555 e8ba5211392380161f9f23a5d4e59cb1 76 Pfam PF00550 Phosphopantetheine attachment site 21 70 7.5E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_A2555 e8ba5211392380161f9f23a5d4e59cb1 76 Gene3D G3DSA:1.10.1200.10 2 74 1.8E-5 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_A0457 d827723c329d13c8c68e858de822b7ac 606 Gene3D G3DSA:2.60.40.3010 59 141 4.8E-9 T 15-10-2018 VIBNI_A0457 d827723c329d13c8c68e858de822b7ac 606 Gene3D G3DSA:2.60.40.10 158 239 2.2E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0457 d827723c329d13c8c68e858de822b7ac 606 Gene3D G3DSA:2.60.40.10 265 333 1.4E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A0457 d827723c329d13c8c68e858de822b7ac 606 Pfam PF07603 Protein of unknown function (DUF1566) 443 595 1.8E-19 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_B0417 1ba53aff9a1d50e7bcc02415725333c1 169 Gene3D G3DSA:3.10.180.10 1 149 1.4E-26 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B0417 1ba53aff9a1d50e7bcc02415725333c1 169 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 147 2.8E-11 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0417 1ba53aff9a1d50e7bcc02415725333c1 169 SUPERFAMILY SSF54593 3 152 1.26E-24 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1193 96d40af22a29cbf573bad0f2f39548d6 78 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 1.4E-29 T 15-10-2018 IPR018680 Protein of unknown function DUF2164 VIBNI_B1305 be55a2035a16278d97302d7f0aecf354 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 5.3E-48 T 15-10-2018 IPR014176 Phasin, subfamily 3 VIBNI_B1305 be55a2035a16278d97302d7f0aecf354 115 Pfam PF09361 Phasin protein 8 107 6.7E-19 T 15-10-2018 IPR018968 Phasin VIBNI_A1361 7a55fc4d4d15b4789eec37ebba028ff7 225 Pfam PF04012 PspA/IM30 family 2 218 4.6E-60 T 15-10-2018 IPR007157 PspA/IM30 VIBNI_A1361 7a55fc4d4d15b4789eec37ebba028ff7 225 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.5E-95 T 15-10-2018 IPR014319 Phage shock protein, PspA VIBNI_B1323 7f46db09327732b36b411b3a707bcd94 350 Pfam PF06580 Histidine kinase 152 228 1.6E-24 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VIBNI_B1323 7f46db09327732b36b411b3a707bcd94 350 Gene3D G3DSA:3.30.565.10 213 341 3.6E-14 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_B1323 7f46db09327732b36b411b3a707bcd94 350 SUPERFAMILY SSF55874 206 337 2.62E-12 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VIBNI_A3584 69e1f2efff293037b23a79f581f4ef82 186 Pfam PF05137 Fimbrial assembly protein (PilN) 102 162 2.6E-9 T 15-10-2018 IPR007813 Fimbrial assembly PilN VIBNI_A1132 b3323250870fbd498b880fd05b16298b 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 74 347 2.7E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B0875 04c75bac20250a761ef821d7f4f52399 276 Gene3D G3DSA:3.20.20.190 6 226 6.5E-48 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B0875 04c75bac20250a761ef821d7f4f52399 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 124 7.1E-28 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VIBNI_B0875 04c75bac20250a761ef821d7f4f52399 276 SUPERFAMILY SSF51695 12 266 1.26E-49 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VIBNI_B1863 8727ed80f32bdf42dbffdf3e9e67f4c9 130 SUPERFAMILY SSF159238 1 129 3.01E-42 T 15-10-2018 IPR023159 SO1590-like superfamily VIBNI_B1863 8727ed80f32bdf42dbffdf3e9e67f4c9 130 Gene3D G3DSA:2.40.350.10 1 130 2.5E-49 T 15-10-2018 IPR023159 SO1590-like superfamily VIBNI_B1863 8727ed80f32bdf42dbffdf3e9e67f4c9 130 Pfam PF11528 Protein of unknown function (DUF3224) 4 127 3.7E-42 T 15-10-2018 IPR021607 Protein of unknown function DUF3224 VIBNI_A2233 8ec2f98e81ad0eac754b5624595d4052 135 Pfam PF04138 GtrA-like protein 11 130 1.1E-23 T 15-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 VIBNI_B0522 4ec99220e58d3c0fc3fcc7a3d6caef19 206 PIRSF PIRSF006324 1 205 4.7E-53 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0522 4ec99220e58d3c0fc3fcc7a3d6caef19 206 Pfam PF01810 LysE type translocator 16 198 2.5E-27 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0001 f495f66c2370101adcd15feccd6d5fd6 658 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 4.1E-137 T 15-10-2018 IPR021781 Protein of unknown function DUF3346 VIBNI_B0783 a3fbd5e1e7505014ecd641ffc798dcd9 153 SUPERFAMILY SSF55729 10 145 1.1E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0783 a3fbd5e1e7505014ecd641ffc798dcd9 153 Pfam PF00583 Acetyltransferase (GNAT) family 42 129 6.9E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0783 a3fbd5e1e7505014ecd641ffc798dcd9 153 Gene3D G3DSA:3.40.630.30 7 152 7.0E-31 T 15-10-2018 VIBNI_A2383 0fe1a35fdaf5b11570856916cd7412ff 257 Pfam PF03609 PTS system sorbose-specific iic component 2 232 1.5E-74 T 15-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 VIBNI_A1891 0c5fa40e20fe01e4427c6db00930957c 159 SUPERFAMILY SSF56925 19 157 5.23E-17 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A1891 0c5fa40e20fe01e4427c6db00930957c 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 7.2E-13 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A1891 0c5fa40e20fe01e4427c6db00930957c 159 Gene3D G3DSA:2.40.160.20 18 158 2.4E-21 T 15-10-2018 VIBNI_A2694 dc5e84c3c4a89959e10cf0ffa60fbf6d 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 313 1.7E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A2694 dc5e84c3c4a89959e10cf0ffa60fbf6d 316 Gene3D G3DSA:1.10.3720.10 73 315 1.2E-67 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2694 dc5e84c3c4a89959e10cf0ffa60fbf6d 316 SUPERFAMILY SSF161098 77 304 4.71E-58 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0665 41a393c6111b86af339686d795e41359 167 SUPERFAMILY SSF52540 4 128 1.17E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B0665 41a393c6111b86af339686d795e41359 167 Gene3D G3DSA:3.40.50.300 2 162 5.1E-13 T 15-10-2018 VIBNI_B0325 0e7c5a3e0837e6abc5dadf83bfc59249 132 Gene3D G3DSA:3.40.1580.10 3 128 4.2E-21 T 15-10-2018 IPR037883 Knr4/Smi1-like domain superfamily VIBNI_B0325 0e7c5a3e0837e6abc5dadf83bfc59249 132 SUPERFAMILY SSF160631 9 123 1.05E-11 T 15-10-2018 VIBNI_B2091 0426ca1f3b3b878aab4f924963faa926 293 SUPERFAMILY SSF161098 14 285 1.31E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B2091 0426ca1f3b3b878aab4f924963faa926 293 Gene3D G3DSA:1.10.3720.10 5 282 1.4E-49 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B2091 0426ca1f3b3b878aab4f924963faa926 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 284 2.6E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1898 2a00736a841435d0360ed04f85a7655c 318 Pfam PF07728 AAA domain (dynein-related subfamily) 64 185 1.9E-12 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VIBNI_B1898 2a00736a841435d0360ed04f85a7655c 318 Gene3D G3DSA:3.40.50.300 46 226 2.2E-24 T 15-10-2018 VIBNI_B1898 2a00736a841435d0360ed04f85a7655c 318 SUPERFAMILY SSF52540 47 280 7.49E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1898 2a00736a841435d0360ed04f85a7655c 318 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 10 34 2.3E-7 T 15-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 VIBNI_B0218 047e8ef0b8e4b488fb56aaa630f26ae8 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 146 5.2E-14 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A1027 eea7a1237fc4c89115abd8472c3a1a5e 533 SUPERFAMILY SSF54909 10 527 4.51E-110 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A1027 eea7a1237fc4c89115abd8472c3a1a5e 533 Pfam PF04261 Dyp-type peroxidase family 406 456 1.2E-4 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VIBNI_A2961 2e2653234c96a914df96044a17d5e6a1 214 PIRSF PIRSF004649 2 213 2.1E-56 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VIBNI_A2961 2e2653234c96a914df96044a17d5e6a1 214 Pfam PF05494 MlaC protein 35 201 7.6E-47 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VIBNI_A2961 2e2653234c96a914df96044a17d5e6a1 214 Gene3D G3DSA:3.10.450.710 27 206 1.8E-38 T 15-10-2018 VIBNI_B0880 d3ba46ef7bc040fee9b3150fc941ef1a 119 Gene3D G3DSA:3.40.30.10 20 118 4.9E-14 T 15-10-2018 VIBNI_B0880 d3ba46ef7bc040fee9b3150fc941ef1a 119 SUPERFAMILY SSF52833 40 118 1.46E-18 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_B0880 d3ba46ef7bc040fee9b3150fc941ef1a 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 118 2.8E-10 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VIBNI_A2469 1187941881aeb7ee23da3df06ac35ec5 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 7.9E-65 T 15-10-2018 VIBNI_A2469 1187941881aeb7ee23da3df06ac35ec5 208 Gene3D G3DSA:3.40.50.2020 1 208 2.2E-74 T 15-10-2018 VIBNI_A2469 1187941881aeb7ee23da3df06ac35ec5 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.688 T 15-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VIBNI_A2469 1187941881aeb7ee23da3df06ac35ec5 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 2.2E-92 T 15-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VIBNI_A2469 1187941881aeb7ee23da3df06ac35ec5 208 SUPERFAMILY SSF53271 3 206 4.33E-67 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like VIBNI_A2095 1820ec40182ef33f47fb3f085d545f5b 514 SUPERFAMILY SSF52540 273 416 6.07E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A2095 1820ec40182ef33f47fb3f085d545f5b 514 Gene3D G3DSA:3.40.50.300 227 488 1.3E-25 T 15-10-2018 VIBNI_A2095 1820ec40182ef33f47fb3f085d545f5b 514 Pfam PF01926 50S ribosome-binding GTPase 286 405 6.8E-15 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 Gene3D G3DSA:1.10.10.370 39 109 2.8E-32 T 15-10-2018 VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 PIRSF PIRSF006223 2 109 3.3E-44 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.9E-51 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 Pfam PF04358 DsrC like protein 4 109 4.3E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 SUPERFAMILY SSF69721 2 109 8.5E-43 T 15-10-2018 IPR025526 DsrC-like domain superfamily VIBNI_A1811 38a5734cebff5e20c2f0d32340a081b0 109 Gene3D G3DSA:3.30.1420.10 1 38 1.6E-14 T 15-10-2018 VIBNI_B0054 37781e3cf51655f04c76246f98549d02 116 SUPERFAMILY SSF47413 4 77 6.26E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VIBNI_B0054 37781e3cf51655f04c76246f98549d02 116 Gene3D G3DSA:1.10.260.40 2 86 7.2E-11 T 15-10-2018 VIBNI_B1432 12060707653b6d7d6ee14b1c38b6be34 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VIBNI_B1432 12060707653b6d7d6ee14b1c38b6be34 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 6.8E-25 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VIBNI_B1432 12060707653b6d7d6ee14b1c38b6be34 151 SUPERFAMILY SSF53927 7 141 1.74E-30 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VIBNI_B1432 12060707653b6d7d6ee14b1c38b6be34 151 Gene3D G3DSA:3.40.140.10 2 146 1.1E-39 T 15-10-2018 VIBNI_B1432 12060707653b6d7d6ee14b1c38b6be34 151 PIRSF PIRSF006019 1 147 6.1E-44 T 15-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VIBNI_A2028 f63fb3c9eee80311eb3676f2cb940c2f 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 12 418 2.9E-107 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2028 f63fb3c9eee80311eb3676f2cb940c2f 422 PIRSF PIRSF006066 1 421 3.0E-75 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2028 f63fb3c9eee80311eb3676f2cb940c2f 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 3 418 6.5E-101 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B1350 b24da7458f0aab2aee4f49e50fa20166 216 PIRSF PIRSF006320 1 216 2.3E-106 T 15-10-2018 IPR026041 Glyoxalase ElbB VIBNI_B1350 b24da7458f0aab2aee4f49e50fa20166 216 SUPERFAMILY SSF52317 1 210 2.86E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B1350 b24da7458f0aab2aee4f49e50fa20166 216 Gene3D G3DSA:3.40.50.880 1 215 1.6E-90 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like VIBNI_B2121 7ca82cf04a75f185d85061dd9c453137 488 Pfam PF01458 Uncharacterized protein family (UPF0051) 226 459 2.9E-68 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 VIBNI_B2121 7ca82cf04a75f185d85061dd9c453137 488 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 19 479 2.2E-196 T 15-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 VIBNI_B2121 7ca82cf04a75f185d85061dd9c453137 488 SUPERFAMILY SSF101960 39 485 1.57E-134 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VIBNI_B1502 b123aebd4a1aa68fa14e8e4cf16e0216 705 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 124 604 2.4E-74 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B1502 b123aebd4a1aa68fa14e8e4cf16e0216 705 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 694 2.5E-209 T 15-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VIBNI_A1041 365ce8a77c9a4395058a07ce0c88c7bc 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 302 2.4E-39 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3509 251383c10682ba9660e4a67ffb8e23f0 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 221 2.8E-58 T 15-10-2018 IPR026387 Outer membrane protein VIBNI_B1785 c66c7c54032c1ddc601812852bf0d768 295 Pfam PF12706 Beta-lactamase superfamily domain 48 254 4.2E-18 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_B1785 c66c7c54032c1ddc601812852bf0d768 295 Gene3D G3DSA:3.60.15.10 11 293 9.0E-51 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B1785 c66c7c54032c1ddc601812852bf0d768 295 SUPERFAMILY SSF56281 29 258 4.62E-19 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A3654 dd4fb48ee841c4d17c7d6819b6dbbea3 182 Pfam PF02397 Bacterial sugar transferase 3 172 1.6E-47 T 15-10-2018 IPR003362 Bacterial sugar transferase VIBNI_A3143 50333fea824096f3dbef9d8769b5556d 378 SUPERFAMILY SSF56059 122 312 4.12E-9 T 15-10-2018 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 SMART SM00421 219 276 3.7E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 252 264 6.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 252 6.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 236 6.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 Gene3D G3DSA:1.10.10.10 163 292 1.7E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 Pfam PF00196 Bacterial regulatory proteins, luxR family 221 275 2.2E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VIBNI_B0074 4e06275a8827e8e021d77c70103e5025 296 SUPERFAMILY SSF46894 215 279 1.16E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VIBNI_A1115 27028bebb167b9fef25cde5b080f8d1b 307 SUPERFAMILY SSF109604 24 302 3.92E-41 T 15-10-2018 VIBNI_A1115 27028bebb167b9fef25cde5b080f8d1b 307 Gene3D G3DSA:1.10.3210.10 20 289 4.0E-39 T 15-10-2018 VIBNI_A1115 27028bebb167b9fef25cde5b080f8d1b 307 Pfam PF08668 HDOD domain 39 237 2.2E-37 T 15-10-2018 IPR013976 Metal-dependent hydrolase HDOD VIBNI_B0680 63d71a8889f08d12033d0dcb459e6743 69 Pfam PF04964 Flp/Fap pilin component 16 63 4.0E-14 T 15-10-2018 IPR007047 Flp/Fap pilin component VIBNI_A1044 501f0ed91d223458abf8c59714549fe2 434 SUPERFAMILY SSF53613 31 417 5.77E-43 T 15-10-2018 IPR029056 Ribokinase-like VIBNI_A1044 501f0ed91d223458abf8c59714549fe2 434 Pfam PF00294 pfkB family carbohydrate kinase 90 293 4.2E-10 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB VIBNI_B2143 315b964f4daf87f29f9ee369fb595a62 168 Gene3D G3DSA:3.40.630.30 1 155 4.0E-34 T 15-10-2018 VIBNI_B2143 315b964f4daf87f29f9ee369fb595a62 168 Pfam PF13302 Acetyltransferase (GNAT) domain 6 143 1.0E-23 T 15-10-2018 IPR000182 GNAT domain VIBNI_B2143 315b964f4daf87f29f9ee369fb595a62 168 SUPERFAMILY SSF55729 1 164 4.15E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 PIRSF PIRSF039093 1 175 1.2E-87 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 SUPERFAMILY SSF56235 2 172 8.35E-58 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.903 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.5E-87 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 Gene3D G3DSA:3.60.20.10 1 173 2.7E-67 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_A3607 4bc5f30cc1437b17c0184db3f8708518 179 Pfam PF00227 Proteasome subunit 2 169 4.5E-24 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 Pfam PF01061 ABC-2 type transporter 8 218 1.3E-40 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.3E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.3E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.3E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.3E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VIBNI_A2853 0fa1e8cb3f17d479078d4a9011c01bf9 256 PIRSF PIRSF006648 6 253 3.1E-25 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VIBNI_B1442 3e91459888024e6a5c9c4d6791d1c699 294 Pfam PF03974 Ecotin 181 289 1.5E-17 T 15-10-2018 IPR005658 Proteinase inhibitor I11, ecotin VIBNI_B1442 3e91459888024e6a5c9c4d6791d1c699 294 Gene3D G3DSA:2.60.40.550 171 292 1.3E-21 T 15-10-2018 VIBNI_B1442 3e91459888024e6a5c9c4d6791d1c699 294 SUPERFAMILY SSF49772 181 289 8.5E-19 T 15-10-2018 IPR036198 Ecotin superfamily VIBNI_A2348 c92d14ccbd40e4fef82ec28c2715245e 454 Pfam PF04055 Radical SAM superfamily 69 237 2.5E-10 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VIBNI_A2348 c92d14ccbd40e4fef82ec28c2715245e 454 SMART SM00729 64 287 1.1E-37 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VIBNI_A2348 c92d14ccbd40e4fef82ec28c2715245e 454 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 445 6.8E-171 T 15-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VIBNI_A2348 c92d14ccbd40e4fef82ec28c2715245e 454 Gene3D G3DSA:3.80.30.20 25 365 1.6E-70 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VIBNI_A2348 c92d14ccbd40e4fef82ec28c2715245e 454 SUPERFAMILY SSF102114 57 439 1.43E-76 T 15-10-2018 VIBNI_A0754 3cd595eba019b63a657b460d98791c4e 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 2.3E-14 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VIBNI_A0754 3cd595eba019b63a657b460d98791c4e 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 2.2E-16 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VIBNI_B1325 19b1a3fa166ddef146027802610a934d 256 Gene3D G3DSA:2.50.20.10 24 250 7.1E-36 T 15-10-2018 VIBNI_B1325 19b1a3fa166ddef146027802610a934d 256 PIRSF PIRSF028205 1 253 2.8E-91 T 15-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VIBNI_B1325 19b1a3fa166ddef146027802610a934d 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 249 1.3E-34 T 15-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VIBNI_B0407 c4c4ed7bb546876b7e9b2d39aeea31e4 207 Pfam PF07947 YhhN family 25 203 1.6E-49 T 15-10-2018 IPR012506 YhhN-like GO:0016021 VIBNI_B0651 630adddf2ba0650d54ce4fa862cbe04d 158 SUPERFAMILY SSF54637 32 152 8.83E-26 T 15-10-2018 IPR029069 HotDog domain superfamily VIBNI_B0651 630adddf2ba0650d54ce4fa862cbe04d 158 Pfam PF03061 Thioesterase superfamily 64 141 2.2E-14 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VIBNI_B0651 630adddf2ba0650d54ce4fa862cbe04d 158 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 147 5.3E-21 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VIBNI_B0651 630adddf2ba0650d54ce4fa862cbe04d 158 Gene3D G3DSA:3.10.129.10 7 154 1.8E-32 T 15-10-2018 VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 365 3.7E-28 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 SMART SM00825 Beta-ketoacyl synthase 6 408 9.7E-17 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 Gene3D G3DSA:3.40.47.10 1 255 1.3E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 SUPERFAMILY SSF53901 216 407 6.25E-60 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 247 1.6E-41 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 SUPERFAMILY SSF53901 4 252 2.04E-53 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_A1159 235f5364ce12d4f3d71308d8c44c70ea 412 Gene3D G3DSA:3.40.47.10 261 408 5.6E-41 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 VIBNI_B2145 b097358d03ae29e50e885a15111cfe9a 302 Pfam PF07681 DoxX 12 105 6.7E-10 T 15-10-2018 IPR032808 DoxX family VIBNI_A3274 4066ff560bb10337c4c26aa01ad13914 210 Pfam PF13643 Domain of unknown function (DUF4145) 88 168 1.4E-14 T 15-10-2018 IPR025285 Domain of unknown function DUF4145 VIBNI_B1181 bbe760c04ffa7359e1e9ca14fdf777e1 224 SMART SM00382 34 222 2.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_B1181 bbe760c04ffa7359e1e9ca14fdf777e1 224 SUPERFAMILY SSF52540 5 221 8.83E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1181 bbe760c04ffa7359e1e9ca14fdf777e1 224 Pfam PF00005 ABC transporter 25 171 3.6E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_B1181 bbe760c04ffa7359e1e9ca14fdf777e1 224 Gene3D G3DSA:3.40.50.300 3 223 1.2E-70 T 15-10-2018 VIBNI_B1181 bbe760c04ffa7359e1e9ca14fdf777e1 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_B1366 f32634ab7a460e5101b27b4993f5f725 144 Gene3D G3DSA:3.90.20.10 15 138 8.8E-6 T 15-10-2018 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 149 1.6E-39 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 Gene3D G3DSA:3.40.50.2300 5 155 4.9E-58 T 15-10-2018 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 SMART SM00226 6 152 2.2E-46 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 2.4E-25 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 2.4E-25 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 2.4E-25 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 2.4E-25 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 2.4E-25 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VIBNI_A2374 5950bca6e17ba434c35ebb963a040f48 155 SUPERFAMILY SSF52788 4 153 5.63E-48 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VIBNI_A2326 61078c12ad8fc4e304d53bcb160584f6 398 Pfam PF13679 Methyltransferase domain 117 230 1.3E-15 T 15-10-2018 IPR025714 Methyltransferase domain VIBNI_A1642 2f4e65a1cc175a4fc4f13581cd73538b 329 Pfam PF17236 Family of unknown function (DUF5309) 19 319 5.4E-103 T 15-10-2018 IPR035198 Protein of unknown function DUF5309 VIBNI_B0926 7f706778c719ba02573dd40c1da5f824 391 SUPERFAMILY SSF103473 1 383 9.68E-38 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B0926 7f706778c719ba02573dd40c1da5f824 391 Pfam PF07690 Major Facilitator Superfamily 16 307 6.6E-18 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B0926 7f706778c719ba02573dd40c1da5f824 391 Gene3D G3DSA:1.20.1250.20 3 381 2.1E-31 T 15-10-2018 VIBNI_B1579 2c04b6bdd698ad60a4595773a01c2485 331 Gene3D G3DSA:3.75.10.10 22 319 1.8E-45 T 15-10-2018 VIBNI_B1579 2c04b6bdd698ad60a4595773a01c2485 331 Pfam PF02274 Amidinotransferase 27 324 2.9E-63 T 15-10-2018 VIBNI_B1579 2c04b6bdd698ad60a4595773a01c2485 331 SUPERFAMILY SSF55909 23 319 5.89E-39 T 15-10-2018 VIBNI_B1579 2c04b6bdd698ad60a4595773a01c2485 331 PIRSF PIRSF028188 8 327 1.3E-141 T 15-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VIBNI_A2047 73bbecea5d920ccbd1402f847bff3248 459 SUPERFAMILY SSF56935 53 458 5.66E-30 T 15-10-2018 VIBNI_B0585 5769080f6aa82204b5da7737d4189cb2 102 Gene3D G3DSA:1.10.3990.20 8 101 2.3E-30 T 15-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VIBNI_B0585 5769080f6aa82204b5da7737d4189cb2 102 Pfam PF13467 Ribbon-helix-helix domain 16 83 6.4E-23 T 15-10-2018 IPR027373 Ribbon-helix-helix domain VIBNI_A2222 e3a01d0f004d8ff361abd18c71575440 493 Gene3D G3DSA:3.30.20.10 177 247 5.7E-77 T 15-10-2018 VIBNI_A2222 e3a01d0f004d8ff361abd18c71575440 493 Gene3D G3DSA:1.10.530.10 104 345 5.7E-77 T 15-10-2018 VIBNI_A2222 e3a01d0f004d8ff361abd18c71575440 493 Pfam PF00182 Chitinase class I 105 326 1.9E-30 T 15-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VIBNI_A2222 e3a01d0f004d8ff361abd18c71575440 493 SUPERFAMILY SSF53955 86 349 2.81E-53 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily VIBNI_B0174 e7c7c703321c89a98d124a02dd92c15c 285 Gene3D G3DSA:3.60.130.10 6 285 5.9E-74 T 15-10-2018 VIBNI_B0174 e7c7c703321c89a98d124a02dd92c15c 285 SUPERFAMILY SSF51197 13 281 5.04E-68 T 15-10-2018 VIBNI_B0174 e7c7c703321c89a98d124a02dd92c15c 285 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 278 2.4E-50 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VIBNI_A2818 810018e1de9abed00eef6e515600e022 361 Pfam PF01594 AI-2E family transporter 14 347 2.0E-56 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like VIBNI_B1105 954550fc720a9b402dbe1c84e25288fb 157 Gene3D G3DSA:3.40.50.1010 1 157 8.5E-55 T 15-10-2018 VIBNI_B1105 954550fc720a9b402dbe1c84e25288fb 157 Pfam PF01936 NYN domain 3 151 1.2E-40 T 15-10-2018 IPR021139 NYN domain, limkain-b1-type VIBNI_A3051 6b531eb75057c2588a9e708e12369577 114 SUPERFAMILY SSF46973 12 110 1.18E-34 T 15-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VIBNI_A3051 6b531eb75057c2588a9e708e12369577 114 PIRSF PIRSF000699 7 114 1.3E-38 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VIBNI_A3051 6b531eb75057c2588a9e708e12369577 114 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 17 109 7.4E-34 T 15-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VIBNI_A3051 6b531eb75057c2588a9e708e12369577 114 Gene3D G3DSA:1.20.58.280 12 112 3.1E-35 T 15-10-2018 VIBNI_A3120 63e41f87df1a12e83f0ca8d4864cd08f 265 SUPERFAMILY SSF49785 2 123 3.06E-18 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_A3120 63e41f87df1a12e83f0ca8d4864cd08f 265 Gene3D G3DSA:2.60.120.260 26 156 2.7E-11 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily VIBNI_B1066 2b85e1c0e8b93d5d92dc5e705970b2e9 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 314 1.5E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1066 2b85e1c0e8b93d5d92dc5e705970b2e9 320 Gene3D G3DSA:1.10.3720.10 77 318 5.0E-69 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1066 2b85e1c0e8b93d5d92dc5e705970b2e9 320 SUPERFAMILY SSF161098 81 308 8.5E-60 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1088 76ee695aa17cbc6b50a2ca53286b79ef 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 7.3E-189 T 15-10-2018 IPR006698 Uncharacterised protein family UPF0229 VIBNI_A1088 76ee695aa17cbc6b50a2ca53286b79ef 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.495 T 15-10-2018 IPR006698 Uncharacterised protein family UPF0229 VIBNI_B2028 77566c71d12cc5383ef30d2637f3d752 99 Gene3D G3DSA:2.60.40.10 4 98 1.7E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_B2028 77566c71d12cc5383ef30d2637f3d752 99 SUPERFAMILY SSF81296 12 94 3.92E-13 T 15-10-2018 IPR014756 Immunoglobulin E-set VIBNI_B2060 0d993e00437c52d9bbffd815fd4ca0e9 142 Gene3D G3DSA:1.20.120.550 4 138 3.8E-18 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_B2060 0d993e00437c52d9bbffd815fd4ca0e9 142 Pfam PF01124 MAPEG family 13 137 4.5E-16 T 15-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VIBNI_B2060 0d993e00437c52d9bbffd815fd4ca0e9 142 SUPERFAMILY SSF161084 11 135 1.22E-19 T 15-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VIBNI_B0384 97331efb82d78fa3606c131ac68ec576 165 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 1.2E-25 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0384 97331efb82d78fa3606c131ac68ec576 165 Gene3D G3DSA:3.40.630.30 1 164 4.3E-38 T 15-10-2018 VIBNI_B0384 97331efb82d78fa3606c131ac68ec576 165 SUPERFAMILY SSF55729 2 150 4.58E-34 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0922 573e4d096b06256ec54d19d8872a5b49 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.3E-103 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_B0922 573e4d096b06256ec54d19d8872a5b49 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.7E-148 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_B0922 573e4d096b06256ec54d19d8872a5b49 378 PIRSF PIRSF000267 2 377 6.6E-116 T 15-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VIBNI_A3105 bfbcf2e445fa2c53d069dcd23d753089 89 Pfam PF11747 Killing trait 9 74 1.2E-28 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_B1621 e097c68d52c034e1fa3488c43a56a655 414 Pfam PF10082 Putative beta-barrel porin 2 37 405 3.1E-19 T 15-10-2018 IPR018759 Putative beta-barrel porin 2 VIBNI_A3826 a1e8c21147f9229faf4b3aca89d81af3 88 Gene3D G3DSA:3.30.160.140 1 88 2.7E-33 T 15-10-2018 IPR036692 Shew3726-like superfamily VIBNI_A3826 a1e8c21147f9229faf4b3aca89d81af3 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 2.5E-26 T 15-10-2018 IPR009962 Protein of unknown function DUF1488 VIBNI_A3826 a1e8c21147f9229faf4b3aca89d81af3 88 SUPERFAMILY SSF160272 2 86 6.8E-30 T 15-10-2018 IPR036692 Shew3726-like superfamily VIBNI_A1971 f2b38244072a02ec55e6984df18e467f 424 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 241 406 2.0E-24 T 15-10-2018 IPR026337 HEXXH motif domain VIBNI_B2078 884b2f59858cbcce7cd1e0904f3b6099 160 SUPERFAMILY SSF55729 4 152 3.38E-38 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B2078 884b2f59858cbcce7cd1e0904f3b6099 160 Gene3D G3DSA:3.40.630.30 1 159 5.4E-50 T 15-10-2018 VIBNI_B2078 884b2f59858cbcce7cd1e0904f3b6099 160 Pfam PF00583 Acetyltransferase (GNAT) family 41 137 4.2E-19 T 15-10-2018 IPR000182 GNAT domain VIBNI_A2399 43a32cac4af7c511ab4de2935e0299e3 321 SUPERFAMILY SSF53822 29 252 1.33E-20 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A2399 43a32cac4af7c511ab4de2935e0299e3 321 Gene3D G3DSA:3.40.50.2300 46 292 3.3E-104 T 15-10-2018 VIBNI_A2399 43a32cac4af7c511ab4de2935e0299e3 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 1.2E-116 T 15-10-2018 IPR007487 ABC transporter, substrate-binding protein VIBNI_A2399 43a32cac4af7c511ab4de2935e0299e3 321 Gene3D G3DSA:3.40.50.2300 143 314 3.3E-104 T 15-10-2018 VIBNI_B1689 3a71a6a6d36730bbbab34af1cdfbe1f0 366 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 39 307 6.3E-11 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 VIBNI_B1689 3a71a6a6d36730bbbab34af1cdfbe1f0 366 SUPERFAMILY SSF51445 21 336 1.03E-46 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily VIBNI_B1689 3a71a6a6d36730bbbab34af1cdfbe1f0 366 Gene3D G3DSA:3.20.20.80 27 317 1.0E-28 T 15-10-2018 VIBNI_A1905 c52dd98e5742470ece7ea3bbdf793db9 290 SUPERFAMILY SSF161098 8 290 2.75E-69 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1905 c52dd98e5742470ece7ea3bbdf793db9 290 Gene3D G3DSA:1.10.3720.10 1 277 6.9E-56 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1905 c52dd98e5742470ece7ea3bbdf793db9 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 274 4.4E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0567 a49cf3b265c4c8c60a3ed290c07004f3 219 SUPERFAMILY SSF56235 1 213 1.62E-53 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B0567 a49cf3b265c4c8c60a3ed290c07004f3 219 Gene3D G3DSA:3.60.20.10 1 214 3.6E-64 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B0567 a49cf3b265c4c8c60a3ed290c07004f3 219 Pfam PF06267 Family of unknown function (DUF1028) 2 190 2.3E-50 T 15-10-2018 IPR010430 Protein of unknown function DUF1028 VIBNI_A3458 bb2735386648fb37516580ae3ab724e2 680 Gene3D G3DSA:1.10.1370.40 13 675 8.7E-268 T 15-10-2018 VIBNI_A3458 bb2735386648fb37516580ae3ab724e2 680 Gene3D G3DSA:1.10.1370.10 140 610 8.7E-268 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VIBNI_A3458 bb2735386648fb37516580ae3ab724e2 680 Pfam PF01432 Peptidase family M3 222 677 4.2E-165 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VIBNI_A3458 bb2735386648fb37516580ae3ab724e2 680 SUPERFAMILY SSF55486 1 677 8.69E-211 T 15-10-2018 VIBNI_A2177 c5c1c2b7be96d93a9e452075eb9260bf 388 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 69 276 1.2E-25 T 15-10-2018 IPR008775 Phytanoyl-CoA dioxygenase VIBNI_A2177 c5c1c2b7be96d93a9e452075eb9260bf 388 SUPERFAMILY SSF51197 69 351 2.11E-41 T 15-10-2018 VIBNI_A2177 c5c1c2b7be96d93a9e452075eb9260bf 388 Gene3D G3DSA:2.60.120.620 63 328 1.6E-36 T 15-10-2018 VIBNI_B0103 9755ade923f868478feae4313c90d06f 175 Gene3D G3DSA:2.40.160.20 25 175 3.4E-6 T 15-10-2018 VIBNI_B0103 9755ade923f868478feae4313c90d06f 175 SUPERFAMILY SSF56925 32 175 1.75E-10 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B0103 9755ade923f868478feae4313c90d06f 175 Pfam PF13505 Outer membrane protein beta-barrel domain 12 175 8.0E-17 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 Gene3D G3DSA:2.10.10.20 86 131 1.9E-14 T 15-10-2018 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 SUPERFAMILY SSF51055 137 187 1.14E-8 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 SMART SM00495 88 130 7.0E-11 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 SMART SM00495 136 185 0.4 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 Gene3D G3DSA:2.10.10.20 132 190 9.5E-8 T 15-10-2018 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 Pfam PF02839 Carbohydrate binding domain 105 127 3.7E-6 T 15-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A3243 3c05662a714d018dc53a3720d5414af7 193 SUPERFAMILY SSF51055 82 129 5.1E-13 T 15-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VIBNI_A2066 9cd7cb177315902cf29e601bd89a0783 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 329 3.4E-36 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1607 ffc0a0a62cfb013de5af9a3bde7a4325 417 Pfam PF04932 O-Antigen ligase 200 341 4.5E-10 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_B1698 b9364bfbbbe3e270c274d81b2a2f51dd 307 PIRSF PIRSF001439 1 307 6.8E-80 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VIBNI_B1698 b9364bfbbbe3e270c274d81b2a2f51dd 307 Gene3D G3DSA:3.30.1780.10 4 302 2.6E-83 T 15-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 VIBNI_B1698 b9364bfbbbe3e270c274d81b2a2f51dd 307 Gene3D G3DSA:3.40.50.720 121 286 2.6E-83 T 15-10-2018 VIBNI_B1698 b9364bfbbbe3e270c274d81b2a2f51dd 307 SUPERFAMILY SSF51735 1 301 2.42E-80 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B1698 b9364bfbbbe3e270c274d81b2a2f51dd 307 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 298 1.7E-67 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VIBNI_B0724 6aa1ac0a5507b2e8e3350738a2aa4df1 494 Pfam PF13271 Domain of unknown function (DUF4062) 6 88 4.7E-27 T 15-10-2018 IPR025139 Domain of unknown function DUF4062 VIBNI_A3150 1fb5062d1045c0b18149659006bd5493 164 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 16 159 6.8E-31 T 15-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VIBNI_A2038 161d3adae839e0283b30d69166c8943f 355 Pfam PF09375 Imelysin 71 333 5.9E-34 T 15-10-2018 IPR018976 Imelysin-like domain VIBNI_A2038 161d3adae839e0283b30d69166c8943f 355 Gene3D G3DSA:1.20.1420.20 56 355 9.5E-65 T 15-10-2018 IPR038352 Imelysin-like domain superfamily VIBNI_A0285 32010e88298a32fb9a46e43629f7b942 79 Pfam PF11697 Protein of unknown function (DUF3293) 3 48 3.0E-9 T 15-10-2018 IPR021710 Protein of unknown function DUF3293 VIBNI_A1968 3f80c01bcd9135b7662860665aa53996 198 Gene3D G3DSA:3.40.50.360 1 193 1.6E-33 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A1968 3f80c01bcd9135b7662860665aa53996 198 SUPERFAMILY SSF52218 1 177 2.79E-31 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_A1968 3f80c01bcd9135b7662860665aa53996 198 Pfam PF03358 NADPH-dependent FMN reductase 1 145 3.9E-23 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VIBNI_B1827 8bf8f3056dd7f8de0a1c9a7f6ac75a75 238 SUPERFAMILY SSF100950 3 237 8.37E-62 T 15-10-2018 IPR037171 NagB/RpiA transferase-like VIBNI_B1827 8bf8f3056dd7f8de0a1c9a7f6ac75a75 238 Gene3D G3DSA:3.40.50.1360 1 238 6.5E-90 T 15-10-2018 VIBNI_B1827 8bf8f3056dd7f8de0a1c9a7f6ac75a75 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 237 3.8E-56 T 15-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VIBNI_B1827 8bf8f3056dd7f8de0a1c9a7f6ac75a75 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 227 1.1E-61 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VIBNI_A1440 64b4daf39c09e84bf5589cded1e48635 607 PIRSF PIRSF028304 1 606 4.8E-160 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_A1440 64b4daf39c09e84bf5589cded1e48635 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 3.0E-191 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_A1440 64b4daf39c09e84bf5589cded1e48635 607 Pfam PF05947 Type VI secretion system, TssF 6 605 3.4E-180 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like VIBNI_B0459 c1e5c5d7cade572b2f70a29da1c77ac0 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 304 3.6E-37 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2769 026cd022be677428ea2301e4a5f0b2d0 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.832 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A2769 026cd022be677428ea2301e4a5f0b2d0 444 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.1E-31 T 15-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VIBNI_A2769 026cd022be677428ea2301e4a5f0b2d0 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 3.7E-137 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VIBNI_A2769 026cd022be677428ea2301e4a5f0b2d0 444 Pfam PF02601 Exonuclease VII, large subunit 126 439 3.4E-101 T 15-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VIBNI_B1069 1866f3aa04d4c55daac4eec1e6634f5e 511 SUPERFAMILY SSF53649 4 487 3.53E-75 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VIBNI_B1069 1866f3aa04d4c55daac4eec1e6634f5e 511 Pfam PF00884 Sulfatase 4 336 4.8E-35 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VIBNI_B1069 1866f3aa04d4c55daac4eec1e6634f5e 511 Gene3D G3DSA:3.40.720.10 2 399 3.1E-70 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VIBNI_A1367 b20f94b2fc7d40110d86482ec0cce2a1 187 SUPERFAMILY SSF48150 5 184 1.26E-75 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_A1367 b20f94b2fc7d40110d86482ec0cce2a1 187 Pfam PF03352 Methyladenine glycosylase 8 183 6.1E-75 T 15-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VIBNI_A1367 b20f94b2fc7d40110d86482ec0cce2a1 187 Gene3D G3DSA:1.10.340.30 4 187 1.9E-79 T 15-10-2018 VIBNI_B1897 1542d8238e441e091677fb614fcb8171 576 SUPERFAMILY SSF53300 364 552 1.56E-9 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B1897 1542d8238e441e091677fb614fcb8171 576 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 364 550 4.1E-38 T 15-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 VIBNI_B1897 1542d8238e441e091677fb614fcb8171 576 Pfam PF06213 Cobalamin biosynthesis protein CobT 61 210 8.3E-20 T 15-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 VIBNI_B1897 1542d8238e441e091677fb614fcb8171 576 PIRSF PIRSF031715 227 568 5.2E-65 T 15-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 VIBNI_B1897 1542d8238e441e091677fb614fcb8171 576 PIRSF PIRSF031715 5 236 1.2E-14 T 15-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 VIBNI_A1561 62126ba41069bac5c5591e8f62304e51 75 SUPERFAMILY SSF52833 2 70 6.18E-14 T 15-10-2018 IPR036249 Thioredoxin-like superfamily VIBNI_A1561 62126ba41069bac5c5591e8f62304e51 75 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VIBNI_A1561 62126ba41069bac5c5591e8f62304e51 75 Pfam PF00462 Glutaredoxin 4 60 2.2E-12 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VIBNI_A1561 62126ba41069bac5c5591e8f62304e51 75 Gene3D G3DSA:3.40.30.10 1 74 9.7E-16 T 15-10-2018 VIBNI_A2773 a0849cdb389ff80632d5aa98123cc8fd 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 3.8E-56 T 15-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VIBNI_A2773 a0849cdb389ff80632d5aa98123cc8fd 204 PIRSF PIRSF006170 1 204 3.8E-55 T 15-10-2018 IPR026039 Uncharacterised protein family UPF0070 VIBNI_A2773 a0849cdb389ff80632d5aa98123cc8fd 204 Gene3D G3DSA:1.25.40.10 3 203 2.0E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2773 a0849cdb389ff80632d5aa98123cc8fd 204 SUPERFAMILY SSF48452 86 188 1.14E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0515 a57b98c9f0573b381d7ff72f9db792df 308 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 308 93.901 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VIBNI_B0515 a57b98c9f0573b381d7ff72f9db792df 308 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 293 5.4E-62 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VIBNI_B0515 a57b98c9f0573b381d7ff72f9db792df 308 Pfam PF03186 CobD/Cbib protein 8 287 5.1E-93 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 SUPERFAMILY SSF161070 5 448 4.32E-113 T 15-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.5E-10 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 309 328 1.5E-10 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.5E-10 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 3.9E-20 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0596 59c019805f655c0e2ae354a1f89f5527 449 Pfam PF00209 Sodium:neurotransmitter symporter family 152 447 3.8E-23 T 15-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VIBNI_A0644 ddb2f0842d10fb31a53e6bb21b59d6d8 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 7.8E-34 T 15-10-2018 IPR022069 Protein of unknown function DUF3622 VIBNI_A1941 01deaa630f608abcdfa29e60581c81be 192 Pfam PF06042 Nucleotidyltransferase 22 180 8.2E-40 T 15-10-2018 IPR009267 Putative nucleotidyltransferase VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 502 3.4E-39 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 Gene3D G3DSA:1.10.287.950 207 539 5.5E-67 T 15-10-2018 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 SUPERFAMILY SSF58104 230 539 3.14E-70 T 15-10-2018 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 SMART SM00283 277 538 2.7E-71 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 Pfam PF00672 HAMP domain 208 258 5.6E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 206 2.8E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 2.8E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.8E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.8E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VIBNI_A2046 a35db577f71675c6e187d8d2f3d24630 539 SMART SM00304 208 262 1.0E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VIBNI_A3082 43469105f2d58b0aa3fa28d55a2728bd 183 Pfam PF00583 Acetyltransferase (GNAT) family 78 162 2.8E-13 T 15-10-2018 IPR000182 GNAT domain VIBNI_A3082 43469105f2d58b0aa3fa28d55a2728bd 183 SUPERFAMILY SSF55729 26 164 2.92E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A3082 43469105f2d58b0aa3fa28d55a2728bd 183 Gene3D G3DSA:3.40.630.30 19 168 1.0E-19 T 15-10-2018 VIBNI_B1878 6b2aff97af45a3b48ea34bd4d2cb91b4 191 Pfam PF12802 MarR family 28 88 1.2E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1878 6b2aff97af45a3b48ea34bd4d2cb91b4 191 SUPERFAMILY SSF46785 7 109 1.13E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1878 6b2aff97af45a3b48ea34bd4d2cb91b4 191 SMART SM00347 23 125 1.3E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VIBNI_B1878 6b2aff97af45a3b48ea34bd4d2cb91b4 191 Gene3D G3DSA:1.10.10.10 4 121 7.3E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1870 01cdcbf26c9d227339b9e067eb3f3752 144 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 83 1.5E-5 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VIBNI_B1870 01cdcbf26c9d227339b9e067eb3f3752 144 Gene3D G3DSA:2.30.110.10 10 139 6.9E-12 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VIBNI_B1870 01cdcbf26c9d227339b9e067eb3f3752 144 SUPERFAMILY SSF50475 11 140 3.51E-12 T 15-10-2018 VIBNI_B0165 f4e6475402997c6f604b0959cc4d8cec 189 Pfam PF03861 ANTAR domain 130 181 7.5E-16 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 VIBNI_B0165 f4e6475402997c6f604b0959cc4d8cec 189 SUPERFAMILY SSF52172 2 181 2.48E-20 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B0165 f4e6475402997c6f604b0959cc4d8cec 189 Gene3D G3DSA:1.10.10.10 129 187 9.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0165 f4e6475402997c6f604b0959cc4d8cec 189 SMART SM01012 127 182 1.3E-17 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 VIBNI_B1490 8f42dc14c7ca9738263b353b43c78737 303 SUPERFAMILY SSF103481 44 138 3.79E-8 T 15-10-2018 VIBNI_B1490 8f42dc14c7ca9738263b353b43c78737 303 SUPERFAMILY SSF103481 187 287 7.45E-12 T 15-10-2018 VIBNI_B1490 8f42dc14c7ca9738263b353b43c78737 303 Pfam PF00892 EamA-like transporter family 10 135 7.1E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B1490 8f42dc14c7ca9738263b353b43c78737 303 Pfam PF00892 EamA-like transporter family 152 283 1.0E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0293 4306906fff726734e861de462ab0e616 375 SUPERFAMILY SSF81345 37 368 5.49E-75 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0293 4306906fff726734e861de462ab0e616 375 Gene3D G3DSA:1.10.3470.10 36 374 2.2E-89 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0293 4306906fff726734e861de462ab0e616 375 Pfam PF01032 FecCD transport family 49 368 2.7E-84 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_A0760 b937b1865172bde5118092de4d66795f 254 Pfam PF04333 MlaA lipoprotein 38 229 2.8E-61 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VIBNI_A0760 b937b1865172bde5118092de4d66795f 254 PRINTS PR01805 VacJ lipoprotein signature 108 125 7.5E-27 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VIBNI_A0760 b937b1865172bde5118092de4d66795f 254 PRINTS PR01805 VacJ lipoprotein signature 145 162 7.5E-27 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VIBNI_A0760 b937b1865172bde5118092de4d66795f 254 PRINTS PR01805 VacJ lipoprotein signature 39 52 7.5E-27 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VIBNI_A0760 b937b1865172bde5118092de4d66795f 254 PRINTS PR01805 VacJ lipoprotein signature 57 73 7.5E-27 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VIBNI_A1326 40b094b9a08fb511816e322c07300d10 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 249 2.0E-69 T 15-10-2018 IPR005226 UPF0014 family VIBNI_A3111 ac7eeba20cdc706a405eeab909a14f8e 69 Pfam PF06526 Protein of unknown function (DUF1107) 3 64 3.1E-26 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 VIBNI_A3111 ac7eeba20cdc706a405eeab909a14f8e 69 Gene3D G3DSA:3.30.1910.10 2 65 3.0E-21 T 15-10-2018 VIBNI_A3111 ac7eeba20cdc706a405eeab909a14f8e 69 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 6.0E-17 T 15-10-2018 IPR009491 Protein of unknown function DUF1107 VIBNI_B0006 27f4c05c47a8d4efab309894e344f3a4 87 Gene3D G3DSA:3.30.750.24 2 87 5.5E-12 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0006 27f4c05c47a8d4efab309894e344f3a4 87 SUPERFAMILY SSF52091 4 86 2.16E-12 T 15-10-2018 IPR036513 STAS domain superfamily VIBNI_B0006 27f4c05c47a8d4efab309894e344f3a4 87 Pfam PF13466 STAS domain 5 82 1.0E-10 T 15-10-2018 IPR002645 STAS domain VIBNI_A1201 7820c41ee1893a40e890b5bb8bb99768 398 Pfam PF01979 Amidohydrolase family 50 371 6.0E-9 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VIBNI_A1201 7820c41ee1893a40e890b5bb8bb99768 398 PIRSF PIRSF038994 9 391 1.1E-84 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VIBNI_A1201 7820c41ee1893a40e890b5bb8bb99768 398 Gene3D G3DSA:3.20.20.140 54 358 3.0E-80 T 15-10-2018 VIBNI_A1201 7820c41ee1893a40e890b5bb8bb99768 398 SUPERFAMILY SSF51556 54 357 1.17E-66 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B1588 846e041f2345662855918f4752ebed8c 72 Pfam PF03889 Domain of unknown function 25 62 1.6E-22 T 15-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 VIBNI_A3388 32adeef774340b36ac1963d3d8113c22 211 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 2.5E-85 T 15-10-2018 IPR021342 Protein of unknown function DUF2959 VIBNI_A2695 2165bdda89c08ea2a536fc0d300658c6 272 Gene3D G3DSA:1.10.3720.10 1 259 1.4E-63 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2695 2165bdda89c08ea2a536fc0d300658c6 272 SUPERFAMILY SSF161098 4 272 4.47E-71 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2695 2165bdda89c08ea2a536fc0d300658c6 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 265 7.1E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0207 f25f7535cecc444ee7192c9326c8425b 484 Pfam PF00171 Aldehyde dehydrogenase family 17 478 1.1E-149 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VIBNI_B0207 f25f7535cecc444ee7192c9326c8425b 484 Gene3D G3DSA:3.40.309.10 258 450 1.5E-149 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VIBNI_B0207 f25f7535cecc444ee7192c9326c8425b 484 Gene3D G3DSA:3.40.605.10 17 474 1.5E-149 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_B0207 f25f7535cecc444ee7192c9326c8425b 484 SUPERFAMILY SSF53720 5 479 1.22E-148 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B1006 4ab0c83b9f4afc0b5bd71a1f23400c60 114 Pfam PF08888 HopJ type III effector protein 4 111 7.0E-52 T 15-10-2018 IPR014984 HopJ type III effector protein VIBNI_B1006 4ab0c83b9f4afc0b5bd71a1f23400c60 114 Gene3D G3DSA:3.20.160.10 1 114 1.8E-52 T 15-10-2018 IPR038604 Type III effector HopJ superfamily VIBNI_A3186 361091998e6ab308fb459247e4e920c4 93 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 8 92 1.8E-20 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VIBNI_A3186 361091998e6ab308fb459247e4e920c4 93 Pfam PF04077 DsrH like protein 9 88 1.1E-18 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VIBNI_A3186 361091998e6ab308fb459247e4e920c4 93 Gene3D G3DSA:3.40.1260.10 1 92 1.1E-23 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_A3186 361091998e6ab308fb459247e4e920c4 93 SUPERFAMILY SSF75169 1 92 3.77E-19 T 15-10-2018 IPR027396 DsrEFH-like VIBNI_A0251 76dcc6c195a5f50854e03d281f846281 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 316 2.8E-45 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1885 ba9bd9852ee8b46c6e3870637f46a95a 148 Pfam PF06271 RDD family 23 139 1.5E-15 T 15-10-2018 IPR010432 RDD VIBNI_A3006 d10da69fcd716daccff43f5a48b73b7d 572 Pfam PF03235 Protein of unknown function DUF262 12 253 5.0E-31 T 15-10-2018 IPR004919 Domain of unknown function DUF262 VIBNI_B1263 b2c662327a6f65a4178f956b9399822c 238 Pfam PF01925 Sulfite exporter TauE/SafE 9 232 1.5E-20 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A3639 26c960b3c476fea95db81fe6f031974d 403 SUPERFAMILY SSF53756 2 148 1.57E-8 T 15-10-2018 VIBNI_A2194 ea28ac4ad25c765062db18b2aa1a2781 291 Gene3D G3DSA:3.40.190.10 38 270 3.0E-14 T 15-10-2018 VIBNI_A2194 ea28ac4ad25c765062db18b2aa1a2781 291 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 277 8.2E-12 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VIBNI_A2194 ea28ac4ad25c765062db18b2aa1a2781 291 SUPERFAMILY SSF53850 31 278 1.19E-24 T 15-10-2018 VIBNI_A2194 ea28ac4ad25c765062db18b2aa1a2781 291 Gene3D G3DSA:3.40.190.10 123 235 3.0E-14 T 15-10-2018 VIBNI_A2707 961b7c1936fc428bb59f44fab8b9bf02 160 Pfam PF07295 Zinc-ribbon containing domain 14 156 1.3E-51 T 15-10-2018 IPR009912 Zinc-ribbon containing domain VIBNI_B0877 20fbac706a6d68c83fc0a913a5854539 303 SUPERFAMILY SSF101478 10 298 2.88E-32 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VIBNI_B0877 20fbac706a6d68c83fc0a913a5854539 303 Gene3D G3DSA:1.10.4080.10 4 302 9.7E-22 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VIBNI_B0877 20fbac706a6d68c83fc0a913a5854539 303 Pfam PF03747 ADP-ribosylglycohydrolase 11 283 3.3E-44 T 15-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 VIBNI_A2990 35432ce35da1840163bc70a37e8329c7 248 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.1E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A2990 35432ce35da1840163bc70a37e8329c7 248 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.5E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_B1550 9acfec86d1b32ae7dcb7b9d27c2d21d9 281 SUPERFAMILY SSF53474 33 267 4.78E-31 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1550 9acfec86d1b32ae7dcb7b9d27c2d21d9 281 Gene3D G3DSA:3.40.50.1820 63 277 3.5E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1550 9acfec86d1b32ae7dcb7b9d27c2d21d9 281 Pfam PF12146 Serine aminopeptidase, S33 83 183 3.3E-12 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 VIBNI_A3128 c93f03167f963676d8c82b8991ab95c4 262 Pfam PF10986 Protein of unknown function (DUF2796) 172 258 4.1E-19 T 15-10-2018 IPR021253 Protein of unknown function DUF2796 VIBNI_A3128 c93f03167f963676d8c82b8991ab95c4 262 Pfam PF10986 Protein of unknown function (DUF2796) 28 141 2.9E-29 T 15-10-2018 IPR021253 Protein of unknown function DUF2796 VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 54 106 5.4E-11 T 15-10-2018 IPR013431 Delta-60 repeat VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 316 363 2.6E-4 T 15-10-2018 IPR013431 Delta-60 repeat VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 112 161 2.2E-7 T 15-10-2018 IPR013431 Delta-60 repeat VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 62 96 7.6E-8 T 15-10-2018 IPR013431 Delta-60 repeat VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 120 153 7.8E-6 T 15-10-2018 IPR013431 Delta-60 repeat VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 SUPERFAMILY SSF82171 47 177 2.75E-5 T 15-10-2018 VIBNI_B0073 467f9e1e6648d516793aa8a115c8cb88 1126 Gene3D G3DSA:2.80.10.50 28 166 8.4E-8 T 15-10-2018 VIBNI_B0975 847cc36bd4ebf1fb64ffa5156dd1c76e 416 Pfam PF02653 Branched-chain amino acid transport system / permease component 77 404 7.2E-37 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.6E-47 T 15-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 SUPERFAMILY SSF52440 2 122 1.27E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.3E-139 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 177.056 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Gene3D G3DSA:3.30.470.20 115 295 1.9E-120 T 15-10-2018 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Gene3D G3DSA:3.30.1490.20 137 201 1.9E-120 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 SUPERFAMILY SSF56059 123 313 7.07E-59 T 15-10-2018 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Gene3D G3DSA:3.40.50.20 7 114 1.9E-120 T 15-10-2018 VIBNI_A0061 ffef76e0c17186c859381fb9e9b17265 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 4.5E-80 T 15-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VIBNI_B1429 faa5964bc3532b66c192f5325101964d 356 SUPERFAMILY SSF51395 11 347 1.56E-109 T 15-10-2018 VIBNI_B1429 faa5964bc3532b66c192f5325101964d 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 343 7.8E-89 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VIBNI_B1429 faa5964bc3532b66c192f5325101964d 356 Gene3D G3DSA:3.20.20.70 3 356 6.2E-128 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1144 9103d5ef05fc5bd3be42e9401cb62089 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 6.3E-36 T 15-10-2018 IPR021813 Protein of unknown function DUF3392 VIBNI_A2548 f10c0b982c69e464f4bdfb8ce3a26c7b 75 Pfam PF04023 FeoA domain 1 73 7.3E-16 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VIBNI_A2548 f10c0b982c69e464f4bdfb8ce3a26c7b 75 SMART SM00899 1 74 1.0E-20 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VIBNI_A2548 f10c0b982c69e464f4bdfb8ce3a26c7b 75 Gene3D G3DSA:2.30.30.90 1 75 2.3E-21 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain VIBNI_A2548 f10c0b982c69e464f4bdfb8ce3a26c7b 75 SUPERFAMILY SSF50037 4 74 7.78E-18 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 Gene3D G3DSA:3.90.1150.10 5 392 4.2E-161 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 Gene3D G3DSA:3.40.640.10 60 300 4.2E-161 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 4.2E-38 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 4.2E-38 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 4.2E-38 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 4.2E-38 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 SUPERFAMILY SSF53383 1 394 1.58E-112 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.7E-84 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VIBNI_A2010 37839a341fd8c6a7433edae7e7f9ab9d 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VIBNI_A2030 69f981197fbb8479917f0b0a3a9f2265 365 Gene3D G3DSA:3.40.190.170 40 350 1.4E-116 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A2030 69f981197fbb8479917f0b0a3a9f2265 365 Gene3D G3DSA:3.40.190.10 158 329 1.4E-116 T 15-10-2018 VIBNI_A2030 69f981197fbb8479917f0b0a3a9f2265 365 PIRSF PIRSF039026 6 364 3.4E-142 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VIBNI_A2030 69f981197fbb8479917f0b0a3a9f2265 365 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 329 1.0E-72 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B1214 a983b3dc4509b0c18fa086087cf8cd17 208 Pfam PF13505 Outer membrane protein beta-barrel domain 8 208 6.3E-9 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_B1214 a983b3dc4509b0c18fa086087cf8cd17 208 Gene3D G3DSA:2.40.160.20 31 208 3.2E-7 T 15-10-2018 VIBNI_B1214 a983b3dc4509b0c18fa086087cf8cd17 208 SUPERFAMILY SSF56925 72 208 3.92E-11 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B0200 1b655b52f4566f2384a37a9ebd67cfef 455 Pfam PF01554 MatE 23 184 4.2E-19 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0200 1b655b52f4566f2384a37a9ebd67cfef 455 Pfam PF01554 MatE 250 402 3.6E-14 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0200 1b655b52f4566f2384a37a9ebd67cfef 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 3.7E-48 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0200 1b655b52f4566f2384a37a9ebd67cfef 455 PIRSF PIRSF006603 1 447 4.3E-52 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A2398 555abac8501918c2f4345127db524712 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 269 8.6E-25 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B2070 688cd6a57ae33dc32cf44c8ec62c9fbe 258 Pfam PF13230 Glutamine amidotransferases class-II 28 200 4.9E-14 T 15-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VIBNI_B2070 688cd6a57ae33dc32cf44c8ec62c9fbe 258 SUPERFAMILY SSF56235 2 252 1.63E-33 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B2070 688cd6a57ae33dc32cf44c8ec62c9fbe 258 Gene3D G3DSA:3.60.20.10 1 258 6.4E-89 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VIBNI_B0878 224cabb9c35b09ace17eaab92f738c43 173 Gene3D G3DSA:1.20.1200.10 19 172 6.6E-19 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VIBNI_B0878 224cabb9c35b09ace17eaab92f738c43 173 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 29 149 2.0E-46 T 15-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VIBNI_B0878 224cabb9c35b09ace17eaab92f738c43 173 Pfam PF01923 Cobalamin adenosyltransferase 28 155 1.5E-11 T 15-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VIBNI_B0878 224cabb9c35b09ace17eaab92f738c43 173 SUPERFAMILY SSF89028 9 169 1.39E-30 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VIBNI_B0948 cdf52fd52a621bb254483688c26c6a90 116 SUPERFAMILY SSF54909 6 115 1.82E-15 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0948 cdf52fd52a621bb254483688c26c6a90 116 Pfam PF03795 YCII-related domain 23 115 1.4E-9 T 15-10-2018 IPR005545 YCII-related VIBNI_B0948 cdf52fd52a621bb254483688c26c6a90 116 Gene3D G3DSA:3.30.70.1060 1 116 6.5E-18 T 15-10-2018 VIBNI_B1416 9bd6501f984012adf7ed70da1402c8c0 341 Pfam PF01758 Sodium Bile acid symporter family 47 239 2.1E-43 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VIBNI_B1416 9bd6501f984012adf7ed70da1402c8c0 341 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 327 6.0E-115 T 15-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VIBNI_B1416 9bd6501f984012adf7ed70da1402c8c0 341 PIRSF PIRSF005508 1 341 1.1E-122 T 15-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VIBNI_B1416 9bd6501f984012adf7ed70da1402c8c0 341 Gene3D G3DSA:1.20.1530.20 2 330 7.7E-28 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A0064 f9e1eab0b5107c4e23895beeb6e6a7bc 166 Pfam PF17283 SprT-like zinc ribbon domain 121 161 2.8E-10 T 15-10-2018 IPR035240 SprT-like, zinc ribbon domain VIBNI_A0064 f9e1eab0b5107c4e23895beeb6e6a7bc 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 39.391 T 15-10-2018 IPR023483 Uncharacterised protein family SprT VIBNI_A0064 f9e1eab0b5107c4e23895beeb6e6a7bc 166 Pfam PF10263 SprT-like family 34 115 8.6E-16 T 15-10-2018 IPR006640 SprT-like VIBNI_A0064 f9e1eab0b5107c4e23895beeb6e6a7bc 166 SMART SM00731 12 161 5.3E-53 T 15-10-2018 IPR006640 SprT-like VIBNI_B1148 57ff993327eab86ae9cb04306ead7635 93 Pfam PF10115 Transcriptional activator HlyU 2 92 3.1E-40 T 15-10-2018 IPR018772 Transcription activator HlyU VIBNI_B2062 c30551fad8fad55ee8d97c42d78b9962 470 Gene3D G3DSA:3.20.20.140 7 466 9.8E-200 T 15-10-2018 VIBNI_B2062 c30551fad8fad55ee8d97c42d78b9962 470 Gene3D G3DSA:1.10.2020.10 46 137 9.8E-200 T 15-10-2018 VIBNI_B2062 c30551fad8fad55ee8d97c42d78b9962 470 Pfam PF02614 Glucuronate isomerase 1 466 1.5E-227 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 VIBNI_B2062 c30551fad8fad55ee8d97c42d78b9962 470 SUPERFAMILY SSF51556 2 466 8.96E-182 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B2062 c30551fad8fad55ee8d97c42d78b9962 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.334 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 VIBNI_A2157 99aeec889752d22eb3e8c15c2841db46 296 Gene3D G3DSA:3.20.20.150 1 295 7.4E-68 T 15-10-2018 VIBNI_A2157 99aeec889752d22eb3e8c15c2841db46 296 SUPERFAMILY SSF51658 5 275 3.04E-49 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily VIBNI_A2157 99aeec889752d22eb3e8c15c2841db46 296 Pfam PF01261 Xylose isomerase-like TIM barrel 32 247 4.1E-26 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VIBNI_A0621 2154740ccc3b528de36b9888ef8f8cf6 119 Pfam PF04355 SmpA / OmlA family 35 103 4.1E-26 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VIBNI_A0621 2154740ccc3b528de36b9888ef8f8cf6 119 Gene3D G3DSA:3.30.1450.10 34 115 4.6E-25 T 15-10-2018 IPR037873 BamE-like VIBNI_A0621 2154740ccc3b528de36b9888ef8f8cf6 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 33.449 T 15-10-2018 IPR026592 Outer membrane protein assembly factor BamE VIBNI_B0976 60b69519eb767c71725456ce010ba4c3 324 Pfam PF00248 Aldo/keto reductase family 16 315 1.8E-56 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain VIBNI_B0976 60b69519eb767c71725456ce010ba4c3 324 Gene3D G3DSA:3.20.20.100 1 323 2.5E-70 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_B0976 60b69519eb767c71725456ce010ba4c3 324 SUPERFAMILY SSF51430 1 317 5.11E-64 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VIBNI_A1972 0a5e51b3a93bf3700fb400120c6f73f3 351 Gene3D G3DSA:3.20.20.70 1 343 1.0E-52 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A1972 0a5e51b3a93bf3700fb400120c6f73f3 351 SUPERFAMILY SSF102114 4 305 1.14E-20 T 15-10-2018 VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 Gene3D G3DSA:3.40.50.10490 98 274 5.4E-39 T 15-10-2018 VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 Pfam PF01380 SIS domain 130 257 2.3E-19 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 4.5E-18 T 15-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 Gene3D G3DSA:1.10.10.10 1 76 1.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 SUPERFAMILY SSF53697 104 276 3.52E-37 T 15-10-2018 VIBNI_B0080 481b6ebe4270112b775a1cf11f4f4634 283 SUPERFAMILY SSF46689 1 77 1.09E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A2029 08e6d2a980ae7665dde23455399d4d2b 174 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 162 2.5E-27 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B0483 861bae62f96a97a2728036e93892cc06 266 Pfam PF13649 Methyltransferase domain 54 147 1.0E-6 T 15-10-2018 VIBNI_B0483 861bae62f96a97a2728036e93892cc06 266 SUPERFAMILY SSF53335 26 245 3.96E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_B0483 861bae62f96a97a2728036e93892cc06 266 Gene3D G3DSA:3.40.50.150 14 214 1.0E-21 T 15-10-2018 VIBNI_A1947 ec1db2d5b0f0bb795ccef7890cd600bf 258 SMART SM00342 165 247 3.2E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1947 ec1db2d5b0f0bb795ccef7890cd600bf 258 Pfam PF12833 Helix-turn-helix domain 171 247 1.3E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1947 ec1db2d5b0f0bb795ccef7890cd600bf 258 SUPERFAMILY SSF46689 148 198 1.43E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1947 ec1db2d5b0f0bb795ccef7890cd600bf 258 SUPERFAMILY SSF46689 207 247 4.93E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1947 ec1db2d5b0f0bb795ccef7890cd600bf 258 Gene3D G3DSA:1.10.10.60 150 252 3.8E-22 T 15-10-2018 VIBNI_A2879 73a571f35f9c6f66036c0f23723de6e6 355 SUPERFAMILY SSF53850 152 227 7.71E-5 T 15-10-2018 VIBNI_A2879 73a571f35f9c6f66036c0f23723de6e6 355 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 320 4.4E-72 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A2879 73a571f35f9c6f66036c0f23723de6e6 355 PIRSF PIRSF039026 1 355 1.8E-134 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VIBNI_A2879 73a571f35f9c6f66036c0f23723de6e6 355 Gene3D G3DSA:3.40.190.10 151 322 7.1E-115 T 15-10-2018 VIBNI_A2879 73a571f35f9c6f66036c0f23723de6e6 355 Gene3D G3DSA:3.40.190.170 31 336 7.1E-115 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A0243 c8f29bf4e775ac1fddf3a5c2c74495cc 302 SUPERFAMILY SSF110581 4 300 5.1E-116 T 15-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 VIBNI_A0243 c8f29bf4e775ac1fddf3a5c2c74495cc 302 Gene3D G3DSA:3.40.1790.10 2 302 6.9E-139 T 15-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 VIBNI_A0243 c8f29bf4e775ac1fddf3a5c2c74495cc 302 Pfam PF04227 Indigoidine synthase A like protein 11 300 1.0E-135 T 15-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 VIBNI_A0243 c8f29bf4e775ac1fddf3a5c2c74495cc 302 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 302 43.352 T 15-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.1E-76 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 325 2.1E-44 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 Gene3D G3DSA:3.40.190.10 45 354 6.0E-134 T 15-10-2018 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 SUPERFAMILY SSF53850 25 392 7.25E-91 T 15-10-2018 VIBNI_B1630 82d065a85c029dea711407993a697bd8 393 Gene3D G3DSA:3.40.190.10 135 385 6.0E-134 T 15-10-2018 VIBNI_B1819 e3428271c2abcc93b92e9008785c06b9 165 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 51 158 4.0E-5 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B1819 e3428271c2abcc93b92e9008785c06b9 165 SUPERFAMILY SSF54593 48 164 3.81E-15 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_B1819 e3428271c2abcc93b92e9008785c06b9 165 Gene3D G3DSA:3.10.180.10 24 165 1.7E-20 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2739 cf417f88212286f1a424e7883b207743 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 9.1E-141 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2739 cf417f88212286f1a424e7883b207743 427 PIRSF PIRSF006066 1 425 1.0E-139 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2739 cf417f88212286f1a424e7883b207743 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 3.3E-118 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A0191 95699e242eec7bd2382842b32a375a9f 226 Pfam PF01865 Protein of unknown function DUF47 7 223 6.9E-68 T 15-10-2018 IPR018445 Putative phosphate transport regulator VIBNI_A0191 95699e242eec7bd2382842b32a375a9f 226 Gene3D G3DSA:1.20.58.220 1 225 6.7E-65 T 15-10-2018 IPR038078 PhoU-like domain superfamily VIBNI_A0191 95699e242eec7bd2382842b32a375a9f 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 9.5E-70 T 15-10-2018 IPR002727 Protein of unknown function DUF47 VIBNI_A0191 95699e242eec7bd2382842b32a375a9f 226 SUPERFAMILY SSF109755 28 217 2.79E-16 T 15-10-2018 VIBNI_B2102 82430dd694641f28713a995693e8f0e1 340 SUPERFAMILY SSF53822 34 324 1.77E-60 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_B2102 82430dd694641f28713a995693e8f0e1 340 Pfam PF13407 Periplasmic binding protein domain 45 285 4.0E-52 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_B2102 82430dd694641f28713a995693e8f0e1 340 Gene3D G3DSA:3.40.50.2300 137 322 3.1E-76 T 15-10-2018 VIBNI_B2102 82430dd694641f28713a995693e8f0e1 340 Gene3D G3DSA:3.40.50.2300 46 313 3.1E-76 T 15-10-2018 VIBNI_A2915 06573acdc7a9f61b6c0057656d07389b 763 Pfam PF03968 OstA-like protein 58 189 1.1E-16 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VIBNI_A2915 06573acdc7a9f61b6c0057656d07389b 763 Pfam PF04453 Organic solvent tolerance protein 298 668 1.4E-108 T 15-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VIBNI_A2915 06573acdc7a9f61b6c0057656d07389b 763 Gene3D G3DSA:2.60.450.10 50 105 3.5E-7 T 15-10-2018 VIBNI_A2915 06573acdc7a9f61b6c0057656d07389b 763 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 739 19.321 T 15-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VIBNI_A2436 c5089203e3a6f64940616b863b6368e4 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.0E-84 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2436 c5089203e3a6f64940616b863b6368e4 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 8.5E-116 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A2436 c5089203e3a6f64940616b863b6368e4 453 PIRSF PIRSF006066 271 447 5.3E-49 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2436 c5089203e3a6f64940616b863b6368e4 453 PIRSF PIRSF006066 1 266 1.2E-89 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A1021 33b7050fec6cef752ee02fc52cf35387 480 Pfam PF13440 Polysaccharide biosynthesis protein 28 254 6.0E-15 T 15-10-2018 VIBNI_A0178 da2ad63772ea8497c41cc941c47fbba3 185 SUPERFAMILY SSF55846 5 181 2.49E-62 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_A0178 da2ad63772ea8497c41cc941c47fbba3 185 Gene3D G3DSA:3.40.80.10 3 185 1.0E-54 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_A0178 da2ad63772ea8497c41cc941c47fbba3 185 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 168 9.0E-27 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_A0178 da2ad63772ea8497c41cc941c47fbba3 185 SMART SM00644 17 168 2.9E-47 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VIBNI_B0722 14adf8d1bbd0d9745c490c58f67a4856 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 67 330 3.3E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 7 282 1.3E-107 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.992 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 Gene3D G3DSA:1.20.120.1780 168 284 2.0E-13 T 15-10-2018 VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.2E-69 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 63 85 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site VIBNI_A3730 9d540f5cf28009c297dd766000c7e9c2 284 Gene3D G3DSA:1.10.357.140 20 167 6.1E-46 T 15-10-2018 VIBNI_A0636 3adb43c911f41e14ca9e77909a907869 518 Pfam PF03806 AbgT putative transporter family 15 517 3.8E-127 T 15-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VIBNI_B1931 9f4adbd5fe00c92b0538b27b7a5659cb 280 PIRSF PIRSF028200 2 280 1.2E-80 T 15-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VIBNI_A1062 973e3adfc2b3e7ffc91c686dfe220d14 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.1E-29 T 15-10-2018 IPR010824 Protein of unknown function DUF1425 VIBNI_A1062 973e3adfc2b3e7ffc91c686dfe220d14 129 Gene3D G3DSA:2.60.40.3230 19 129 1.6E-30 T 15-10-2018 IPR038483 YcfL-like superfamily VIBNI_B2162 54a04f0d702928ca87c623c98c405576 94 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 64 1.0E-11 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VIBNI_B2162 54a04f0d702928ca87c623c98c405576 94 SUPERFAMILY SSF143120 1 75 2.62E-14 T 15-10-2018 IPR036165 YefM-like superfamily VIBNI_B2162 54a04f0d702928ca87c623c98c405576 94 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 55 1.3E-9 T 15-10-2018 VIBNI_B0395 b90518deb85b04d00c23afc8d580c329 206 Gene3D G3DSA:3.40.50.360 1 180 1.9E-50 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0395 b90518deb85b04d00c23afc8d580c329 206 SUPERFAMILY SSF52218 4 180 4.76E-49 T 15-10-2018 IPR029039 Flavoprotein-like superfamily VIBNI_B0395 b90518deb85b04d00c23afc8d580c329 206 Pfam PF02525 Flavodoxin-like fold 4 173 4.6E-43 T 15-10-2018 IPR003680 Flavodoxin-like fold VIBNI_A2311 f79ea0516e56fdc8a34e0e43f1682800 139 Gene3D G3DSA:3.10.450.50 4 127 7.4E-23 T 15-10-2018 VIBNI_A2311 f79ea0516e56fdc8a34e0e43f1682800 139 Pfam PF12680 SnoaL-like domain 6 109 2.1E-15 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_A2311 f79ea0516e56fdc8a34e0e43f1682800 139 SUPERFAMILY SSF54427 4 130 2.14E-23 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_A1582 fc9dafa81a1af8e1c477ce2e6b1dfd9a 152 Pfam PF01478 Type IV leader peptidase family 14 111 7.0E-12 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VIBNI_A1582 fc9dafa81a1af8e1c477ce2e6b1dfd9a 152 Gene3D G3DSA:1.20.120.1220 6 151 8.4E-6 T 15-10-2018 VIBNI_A1995 642e62cf180f52368d31c1a43098bf4a 256 SUPERFAMILY SSF55729 87 251 5.83E-12 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1995 642e62cf180f52368d31c1a43098bf4a 256 Gene3D G3DSA:3.40.630.30 42 255 6.4E-19 T 15-10-2018 VIBNI_B1038 8ea083d4bd101e7021175d79471ccde2 310 SUPERFAMILY SSF64182 3 307 1.57E-12 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily VIBNI_B1038 8ea083d4bd101e7021175d79471ccde2 310 PIRSF PIRSF028235 1 310 2.6E-194 T 15-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 VIBNI_A2308 7dc7d210248df359f0f5f7ccd4df944f 253 Pfam PF07103 Protein of unknown function (DUF1365) 8 243 1.0E-70 T 15-10-2018 IPR010775 Protein of unknown function DUF1365 VIBNI_A2094 d600d4cf236c9f5e03b48cfb05be3d3f 125 Gene3D G3DSA:3.10.180.10 1 123 2.4E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2094 d600d4cf236c9f5e03b48cfb05be3d3f 125 SUPERFAMILY SSF54593 3 121 4.03E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VIBNI_A2094 d600d4cf236c9f5e03b48cfb05be3d3f 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 6.0E-9 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 35 43 - T 15-10-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 SUPERFAMILY SSF51556 19 359 2.65E-85 T 15-10-2018 IPR032466 Metal-dependent hydrolase VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 Gene3D G3DSA:3.20.20.140 14 361 8.4E-126 T 15-10-2018 VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 Pfam PF02126 Phosphotriesterase family 31 358 2.0E-63 T 15-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 PIRSF PIRSF016839 19 71 0.39 T 15-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 VIBNI_B0305 b7437b230f03ea5c1f592512125b0097 362 PIRSF PIRSF016839 70 361 1.9E-53 T 15-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 VIBNI_A1441 bf25e42ef240ae3239bd733d21a79b60 321 Pfam PF06996 Type VI secretion, TssG 15 306 8.0E-62 T 15-10-2018 IPR010732 Type VI secretion, TssG-like VIBNI_A1441 bf25e42ef240ae3239bd733d21a79b60 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 15 306 1.1E-56 T 15-10-2018 IPR010732 Type VI secretion, TssG-like VIBNI_A0882 7ebde2cd7ff563ea45fa7dc3e0e6171b 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.5E-102 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VIBNI_A0882 7ebde2cd7ff563ea45fa7dc3e0e6171b 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.836 T 15-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VIBNI_A0458 23040397455a05d32c1c85df0727b38a 176 Pfam PF07603 Protein of unknown function (DUF1566) 42 169 7.7E-24 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_A1042 edc9d7476103e26f96a7b6756e34393c 511 Pfam PF08811 Protein of unknown function (DUF1800) 35 505 5.0E-93 T 15-10-2018 IPR014917 Protein of unknown function DUF1800 VIBNI_A1696 09b14aeca557bc93615aa47d4a5ca317 327 Gene3D G3DSA:1.20.1530.20 3 308 3.0E-26 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily VIBNI_A1696 09b14aeca557bc93615aa47d4a5ca317 327 Pfam PF01758 Sodium Bile acid symporter family 61 222 3.3E-11 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VIBNI_B0741 ede4fe17834181e870f5a7dccc9de177 75 Gene3D G3DSA:1.10.720.30 14 72 8.8E-30 T 15-10-2018 IPR036361 SAP domain superfamily VIBNI_B0741 ede4fe17834181e870f5a7dccc9de177 75 Pfam PF09905 DNA-binding protein VF530 6 68 3.0E-34 T 15-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VIBNI_A2980 0b74977e7adbb80bb7f06f13499750d2 275 SUPERFAMILY SSF56317 1 262 1.31E-76 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_A2980 0b74977e7adbb80bb7f06f13499750d2 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 148 168 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VIBNI_A2980 0b74977e7adbb80bb7f06f13499750d2 275 Pfam PF00795 Carbon-nitrogen hydrolase 2 254 1.8E-51 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VIBNI_A2980 0b74977e7adbb80bb7f06f13499750d2 275 Gene3D G3DSA:3.60.110.10 1 266 2.4E-89 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VIBNI_A2039 372b3d0c434d9aad8fe54b3bc5dfbdf9 461 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 461 3.7E-141 T 15-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VIBNI_A2039 372b3d0c434d9aad8fe54b3bc5dfbdf9 461 SUPERFAMILY SSF46626 319 461 3.87E-23 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A2039 372b3d0c434d9aad8fe54b3bc5dfbdf9 461 PIRSF PIRSF028099 6 461 4.5E-184 T 15-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VIBNI_A2377 7704650cd39f7c1e15e8cae6d1de40fb 778 Pfam PF05170 AsmA family 2 667 3.6E-98 T 15-10-2018 IPR007844 AsmA VIBNI_A0996 08380c838345fd0cdd1b68c201e14214 442 Gene3D G3DSA:2.60.120.380 151 267 9.9E-6 T 15-10-2018 VIBNI_B0304 6c7e043a34a1fd0dbd6e60524c302b12 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 320 1.3E-42 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3189 7a795be8db4a4b01c714e834f302fee7 240 Pfam PF08348 YheO-like PAS domain 31 139 8.8E-36 T 15-10-2018 IPR013559 YheO-like VIBNI_A3189 7a795be8db4a4b01c714e834f302fee7 240 Pfam PF13309 HTH domain 174 231 3.3E-18 T 15-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VIBNI_A3189 7a795be8db4a4b01c714e834f302fee7 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 3.0E-58 T 15-10-2018 IPR013559 YheO-like VIBNI_B1104 2e8efca0dd9db8d89310daefacae0df7 144 Pfam PF13778 Domain of unknown function (DUF4174) 25 134 1.7E-27 T 15-10-2018 IPR025232 Domain of unknown function DUF4174 VIBNI_B1921 4a4eb3c6a7c8b73e5f7032f49793b923 1032 Pfam PF05406 WGR domain 13 82 1.3E-4 T 15-10-2018 IPR008893 WGR domain VIBNI_B1921 4a4eb3c6a7c8b73e5f7032f49793b923 1032 SMART SM00773 5 86 0.0097 T 15-10-2018 IPR008893 WGR domain VIBNI_A1380 c3c442aa7c2c2d0a10f920869b14a878 269 SUPERFAMILY SSF52540 31 235 8.82E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1380 c3c442aa7c2c2d0a10f920869b14a878 269 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VIBNI_A1380 c3c442aa7c2c2d0a10f920869b14a878 269 Gene3D G3DSA:3.40.50.300 16 266 1.6E-51 T 15-10-2018 VIBNI_A1380 c3c442aa7c2c2d0a10f920869b14a878 269 Pfam PF00005 ABC transporter 38 184 1.4E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VIBNI_A1380 c3c442aa7c2c2d0a10f920869b14a878 269 SMART SM00382 46 232 3.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain VIBNI_A1127 1f5258ff4dee505384d485955fb77198 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 407 9.5E-30 T 15-10-2018 IPR010352 Protein of unknown function DUF945 VIBNI_B0491 8ef4371a633faa30944974c2c233827e 136 Pfam PF13673 Acetyltransferase (GNAT) domain 33 135 2.9E-12 T 15-10-2018 IPR000182 GNAT domain VIBNI_B0491 8ef4371a633faa30944974c2c233827e 136 SUPERFAMILY SSF55729 8 120 4.01E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B0491 8ef4371a633faa30944974c2c233827e 136 Gene3D G3DSA:3.40.630.30 1 136 2.5E-27 T 15-10-2018 VIBNI_A1247 9a3c23e0d8efd400a834d5c9c3c9ccb5 222 Gene3D G3DSA:3.50.30.100 1 202 6.3E-51 T 15-10-2018 VIBNI_A1247 9a3c23e0d8efd400a834d5c9c3c9ccb5 222 SUPERFAMILY SSF89562 19 189 1.7E-28 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_A1247 9a3c23e0d8efd400a834d5c9c3c9ccb5 222 Pfam PF03737 Aldolase/RraA 23 178 2.0E-25 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_A2963 642d2278c115baab13458acbab115387 84 SUPERFAMILY SSF82657 5 82 2.22E-27 T 15-10-2018 IPR036065 BolA-like superfamily VIBNI_A2963 642d2278c115baab13458acbab115387 84 PIRSF PIRSF003113 2 83 3.0E-21 T 15-10-2018 IPR002634 BolA protein VIBNI_A2963 642d2278c115baab13458acbab115387 84 Gene3D G3DSA:3.30.300.90 1 84 3.9E-32 T 15-10-2018 VIBNI_A2963 642d2278c115baab13458acbab115387 84 Pfam PF01722 BolA-like protein 20 74 5.3E-14 T 15-10-2018 IPR002634 BolA protein VIBNI_A3113 b86c2d822863187f57f181da9d544989 130 SUPERFAMILY SSF55298 17 127 8.64E-31 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3113 b86c2d822863187f57f181da9d544989 130 Gene3D G3DSA:3.30.1330.40 16 129 2.8E-31 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_A3113 b86c2d822863187f57f181da9d544989 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.3E-22 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_A1312 0712302ed644752f65cc49a449fb3755 212 Gene3D G3DSA:3.40.50.620 14 153 3.0E-25 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VIBNI_A1312 0712302ed644752f65cc49a449fb3755 212 Pfam PF02698 DUF218 domain 30 148 4.9E-21 T 15-10-2018 IPR003848 Domain of unknown function DUF218 VIBNI_A3842 3cedea029a05e2b6f6cdecaa532b401a 266 Pfam PF07070 SpoOM protein 4 222 4.3E-78 T 15-10-2018 IPR009776 Sporulation stage 0, protein M VIBNI_A0634 1f32139f5d0b87c6861c84c3054384ba 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 1.5E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site VIBNI_A1770 285df1c5732109778fbd69f1b39b21e8 347 Gene3D G3DSA:2.70.98.10 92 340 8.7E-9 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VIBNI_B0167 94f07c2d53e0eb56fef694eff4a585a7 327 SUPERFAMILY SSF161098 111 309 8.9E-24 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0167 94f07c2d53e0eb56fef694eff4a585a7 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 316 1.8E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0167 94f07c2d53e0eb56fef694eff4a585a7 327 Gene3D G3DSA:1.10.3720.10 110 312 3.8E-21 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 PIRSF PIRSF006230 1 277 2.6E-106 T 15-10-2018 IPR016478 GTPase, MTG1 VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 PIRSF PIRSF006230 278 311 1200.0 T 15-10-2018 IPR016478 GTPase, MTG1 VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 Gene3D G3DSA:3.40.50.300 3 171 2.6E-44 T 15-10-2018 VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 1.8E-108 T 15-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 SUPERFAMILY SSF52540 9 187 2.0E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 Pfam PF01926 50S ribosome-binding GTPase 117 181 4.6E-14 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 VIBNI_B1199 e59c5bc9c2cbe007526e218eb07b3789 311 Gene3D G3DSA:1.10.1580.10 174 265 2.4E-29 T 15-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VIBNI_B0579 e12dadfb49e3bfc8db577dbf0d32f8cd 267 Gene3D G3DSA:1.10.3720.10 13 261 1.4E-42 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0579 e12dadfb49e3bfc8db577dbf0d32f8cd 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 256 4.3E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0579 e12dadfb49e3bfc8db577dbf0d32f8cd 267 SUPERFAMILY SSF161098 14 250 8.22E-42 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1106 5122f7a91f4b57ef0bd9aa200ac952f3 343 Pfam PF07681 DoxX 197 284 1.2E-5 T 15-10-2018 IPR032808 DoxX family VIBNI_B0797 78f3d5c585537c91ad38d1bc0c55fd0e 158 SUPERFAMILY SSF56925 21 144 1.83E-9 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B0797 78f3d5c585537c91ad38d1bc0c55fd0e 158 Gene3D G3DSA:2.40.160.20 18 158 4.4E-10 T 15-10-2018 VIBNI_B0797 78f3d5c585537c91ad38d1bc0c55fd0e 158 Pfam PF13505 Outer membrane protein beta-barrel domain 5 145 5.7E-11 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A2140 883c79f3ca84940eea705ee9559bf446 338 SUPERFAMILY SSF53448 3 257 5.5E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2140 883c79f3ca84940eea705ee9559bf446 338 Gene3D G3DSA:3.90.550.10 1 210 3.3E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2140 883c79f3ca84940eea705ee9559bf446 338 Pfam PF00535 Glycosyl transferase family 2 8 169 3.6E-29 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VIBNI_A2468 1a06be673fa75369da80d42ff97c07ad 461 PIRSF PIRSF006066 6 461 3.4E-69 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2468 1a06be673fa75369da80d42ff97c07ad 461 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 456 6.6E-91 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2468 1a06be673fa75369da80d42ff97c07ad 461 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 450 1.8E-81 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_B0118 b0ffe0662fe904f6dde9871f3dcd34c3 190 Pfam PF06042 Nucleotidyltransferase 27 182 1.1E-59 T 15-10-2018 IPR009267 Putative nucleotidyltransferase VIBNI_B1041 6a9c6044eda932261a3c958c4ba56213 135 Gene3D G3DSA:3.30.1330.80 3 135 6.4E-46 T 15-10-2018 VIBNI_B1041 6a9c6044eda932261a3c958c4ba56213 135 SUPERFAMILY SSF117856 2 130 1.6E-34 T 15-10-2018 VIBNI_B1041 6a9c6044eda932261a3c958c4ba56213 135 Pfam PF03479 Domain of unknown function (DUF296) 6 111 1.4E-23 T 15-10-2018 IPR005175 PPC domain VIBNI_B1279 f35d281da30105a85b405f2f60a54d96 474 Pfam PF03929 PepSY-associated TM region 24 411 2.5E-65 T 15-10-2018 IPR005625 PepSY-associated TM protein VIBNI_A0247 3b173e40da3edbe7bc25d4f124c6ea17 227 Pfam PF03737 Aldolase/RraA 20 183 3.6E-33 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VIBNI_A0247 3b173e40da3edbe7bc25d4f124c6ea17 227 SUPERFAMILY SSF89562 17 195 2.22E-37 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VIBNI_A0247 3b173e40da3edbe7bc25d4f124c6ea17 227 Gene3D G3DSA:3.50.30.100 1 207 2.7E-58 T 15-10-2018 VIBNI_A1211 adf60b19aaf5b75d8bb130704d1f1346 95 Pfam PF05488 PAAR motif 21 86 2.1E-24 T 15-10-2018 IPR008727 PAAR motif VIBNI_A1211 adf60b19aaf5b75d8bb130704d1f1346 95 Gene3D G3DSA:2.60.200.60 54 95 1.2E-12 T 15-10-2018 VIBNI_A1211 adf60b19aaf5b75d8bb130704d1f1346 95 Gene3D G3DSA:2.60.200.60 1 53 9.5E-13 T 15-10-2018 VIBNI_A1063 ffa2a8837919d5fd9162d1d973feb90e 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.3E-72 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB VIBNI_A1063 ffa2a8837919d5fd9162d1d973feb90e 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.4E-54 T 15-10-2018 IPR014094 Penicillin-binding protein activator LpoB VIBNI_A1063 ffa2a8837919d5fd9162d1d973feb90e 196 Gene3D G3DSA:3.40.50.10610 39 188 1.6E-42 T 15-10-2018 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 SUPERFAMILY SSF52172 1 166 1.02E-37 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 SMART SM00862 145 219 2.8E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-32 T 15-10-2018 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 6.8E-12 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 SMART SM00448 1 112 1.8E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 Pfam PF00072 Response regulator receiver domain 3 107 1.0E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_B1643 b9f8e30830c1db84b6e124110e3228ee 223 Gene3D G3DSA:1.10.10.10 127 221 1.0E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_A1955 2e1b167285c09245df19c9b172fae224 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.9E-53 T 15-10-2018 IPR021212 Domain of unknown function DUF2760 VIBNI_B0756 827b8202eab89de26d5d50f20ed8b61f 277 Pfam PF03618 Kinase/pyrophosphorylase 10 266 2.2E-74 T 15-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VIBNI_B0756 827b8202eab89de26d5d50f20ed8b61f 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 70.876 T 15-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VIBNI_B0690 189ffaaeace2c3a5166948bc89bea395 180 Pfam PF16964 Putative tight adherence pilin protein F 3 180 4.5E-64 T 15-10-2018 IPR031582 Putative tight adherence pilin protein F VIBNI_B1768 a4c3632b87bf487a1577f4ac391b2539 315 Pfam PF03824 High-affinity nickel-transport protein 63 169 1.1E-20 T 15-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 VIBNI_B0212 5ce55d526eeebc44111cef550af68e65 273 Gene3D G3DSA:3.40.190.10 30 270 9.0E-81 T 15-10-2018 VIBNI_B0212 5ce55d526eeebc44111cef550af68e65 273 Gene3D G3DSA:3.40.190.10 99 233 9.0E-81 T 15-10-2018 VIBNI_B0212 5ce55d526eeebc44111cef550af68e65 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 17 271 1.5E-74 T 15-10-2018 IPR011862 Phosphate binding protein GO:0042301 VIBNI_B0212 5ce55d526eeebc44111cef550af68e65 273 SUPERFAMILY SSF53850 19 272 2.54E-69 T 15-10-2018 VIBNI_B0212 5ce55d526eeebc44111cef550af68e65 273 Pfam PF12849 PBP superfamily domain 24 258 1.5E-38 T 15-10-2018 IPR024370 PBP domain VIBNI_A3667 569ed32830dfbb0e2d25aa7f4760aa39 322 Pfam PF02706 Chain length determinant protein 23 125 1.5E-18 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VIBNI_A3657 fff798fbbc8c0260b354665f60f80357 408 Pfam PF04932 O-Antigen ligase 184 336 2.2E-11 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_A0433 3d1b96f84a75b0a1478723e6bba8a406 167 SUPERFAMILY SSF55729 1 130 1.38E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A0433 3d1b96f84a75b0a1478723e6bba8a406 167 Pfam PF13508 Acetyltransferase (GNAT) domain 47 123 9.3E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0433 3d1b96f84a75b0a1478723e6bba8a406 167 Gene3D G3DSA:3.40.630.30 1 167 1.5E-49 T 15-10-2018 VIBNI_A1586 489551f688d2accad2bb2a1d0020dba6 209 SUPERFAMILY SSF58104 23 156 2.35E-5 T 15-10-2018 VIBNI_B0997 666288f8539330a6863c09f087b101cd 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 301 6.6E-43 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3033 eb13e2e509d40f230fb083f508780158 591 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 5.6E-60 T 15-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VIBNI_A3033 eb13e2e509d40f230fb083f508780158 591 Pfam PF04932 O-Antigen ligase 222 369 2.4E-16 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_A3033 eb13e2e509d40f230fb083f508780158 591 Pfam PF15864 Protein glycosylation ligase 174 199 3.1E-11 T 15-10-2018 IPR031726 Protein glycosylation ligase domain VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 Pfam PF08453 Peptidase family M9 N-terminal 31 211 5.0E-52 T 15-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 Pfam PF01752 Collagenase 272 556 2.3E-108 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 456 471 1.6E-29 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 432 450 1.6E-29 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 1.6E-29 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 390 406 1.6E-29 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 372 386 1.6E-29 T 15-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 Gene3D G3DSA:1.10.1740.190 301 448 1.7E-32 T 15-10-2018 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 Gene3D G3DSA:2.60.120.380 588 691 8.7E-14 T 15-10-2018 VIBNI_B0933 6246f20c14f06109b71155f57a38550d 818 Gene3D G3DSA:2.60.120.380 711 817 4.4E-7 T 15-10-2018 VIBNI_A1354 9360fd24f9686aac25099901e59ae5fd 263 Pfam PF11150 Protein of unknown function (DUF2927) 34 233 2.1E-59 T 15-10-2018 IPR021323 Protein of unknown function DUF2927 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 210 229 7.7E-9 T 15-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 7.7E-9 T 15-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 7.7E-9 T 15-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 139 158 7.7E-9 T 15-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 Gene3D G3DSA:1.10.800.10 1 261 8.0E-102 T 15-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 SUPERFAMILY SSF56534 3 247 4.06E-99 T 15-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 7 231 2.1E-49 T 15-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 15-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VIBNI_B1215 34f827350e58b83ad11a230dfe3308d9 261 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 12 255 3.9E-98 T 15-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VIBNI_A2898 44317c4c40d27cf5c3a46292559b3776 266 Pfam PF08239 Bacterial SH3 domain 132 184 3.4E-9 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type VIBNI_A2898 44317c4c40d27cf5c3a46292559b3776 266 Gene3D G3DSA:2.30.30.40 125 184 1.1E-10 T 15-10-2018 VIBNI_A1589 10740ceb9639404c3bb1f95db7aa703e 275 SUPERFAMILY SSF56925 28 275 1.65E-7 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_A1589 10740ceb9639404c3bb1f95db7aa703e 275 Pfam PF04338 Protein of unknown function, DUF481 125 263 1.1E-6 T 15-10-2018 IPR007433 Protein of unknown function DUF481 VIBNI_A1416 f8a66279643e86dc4386e373909a2732 224 Pfam PF04172 LrgB-like family 6 218 6.2E-73 T 15-10-2018 IPR007300 CidB/LrgB family VIBNI_B2040 762254f1e5fa0bd744978e4e566dedfb 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 144 1.4E-30 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A1540 04b016c631b54ba2df9d0de3a976e48e 151 SUPERFAMILY SSF55729 1 145 8.64E-26 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A1540 04b016c631b54ba2df9d0de3a976e48e 151 Pfam PF00583 Acetyltransferase (GNAT) family 27 140 6.9E-19 T 15-10-2018 IPR000182 GNAT domain VIBNI_A1540 04b016c631b54ba2df9d0de3a976e48e 151 Gene3D G3DSA:3.40.630.30 1 151 7.1E-37 T 15-10-2018 VIBNI_A1349 f5402d6a25f5765c495c3a1e861aebc3 350 Gene3D G3DSA:3.40.190.170 35 350 1.1E-111 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1349 f5402d6a25f5765c495c3a1e861aebc3 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 57 320 5.0E-21 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A1349 f5402d6a25f5765c495c3a1e861aebc3 350 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 24 1.2E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VIBNI_A1349 f5402d6a25f5765c495c3a1e861aebc3 350 SUPERFAMILY SSF53850 144 282 1.15E-7 T 15-10-2018 VIBNI_A0265 3bc083346849f363478e23e1b23d6c23 206 Pfam PF03458 UPF0126 domain 8 81 4.6E-22 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 VIBNI_A0265 3bc083346849f363478e23e1b23d6c23 206 Pfam PF03458 UPF0126 domain 95 164 7.2E-20 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 VIBNI_B1668 6dcac9db7f6be576155d2ac9dc735dba 190 SUPERFAMILY SSF53254 1 182 4.07E-8 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B1668 6dcac9db7f6be576155d2ac9dc735dba 190 Gene3D G3DSA:3.40.50.1240 1 189 1.0E-5 T 15-10-2018 IPR029033 Histidine phosphatase superfamily VIBNI_B1231 c3290db7e352012fe072b0d297bc499a 176 Gene3D G3DSA:1.25.40.10 17 173 1.4E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B1231 c3290db7e352012fe072b0d297bc499a 176 SUPERFAMILY SSF81901 47 165 3.53E-11 T 15-10-2018 VIBNI_A2649 bd022b500a99727eeebee59a7119328c 211 PIRSF PIRSF028688 1 211 9.3E-109 T 15-10-2018 IPR014549 Flagellar protein FlgO VIBNI_B0339 8927e86535b2f4679b60172b2a8f9890 146 SUPERFAMILY SSF160719 35 139 9.42E-19 T 15-10-2018 VIBNI_B0339 8927e86535b2f4679b60172b2a8f9890 146 Gene3D G3DSA:3.10.450.40 14 139 8.1E-12 T 15-10-2018 VIBNI_B0339 8927e86535b2f4679b60172b2a8f9890 146 Pfam PF04965 Gene 25-like lysozyme 38 123 2.1E-16 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VIBNI_B0339 8927e86535b2f4679b60172b2a8f9890 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 144 1.9E-36 T 15-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 Gene3D G3DSA:3.90.180.10 17 325 2.0E-121 T 15-10-2018 VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 Gene3D G3DSA:3.40.50.720 126 294 2.0E-121 T 15-10-2018 VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 4.1E-13 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 2.5E-137 T 15-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 SUPERFAMILY SSF50129 2 145 3.65E-43 T 15-10-2018 IPR011032 GroES-like superfamily VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 SMART SM00829 16 324 5.1E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VIBNI_A0016 a23388425a93848c6e0e69cf4aa5b875 326 SUPERFAMILY SSF51735 116 289 8.15E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily VIBNI_B0895 f6cc5519caeaa754e79030bf89f0e608 273 Gene3D G3DSA:3.40.190.10 105 205 2.2E-39 T 15-10-2018 VIBNI_B0895 f6cc5519caeaa754e79030bf89f0e608 273 Gene3D G3DSA:3.40.190.10 26 238 2.2E-39 T 15-10-2018 VIBNI_B0895 f6cc5519caeaa754e79030bf89f0e608 273 SUPERFAMILY SSF53850 22 240 1.95E-19 T 15-10-2018 VIBNI_B0895 f6cc5519caeaa754e79030bf89f0e608 273 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 26 256 6.0E-53 T 15-10-2018 VIBNI_A3628 040196b3ce16aca672dde38625b9d0fa 144 SUPERFAMILY SSF52821 15 143 4.45E-33 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_A3628 040196b3ce16aca672dde38625b9d0fa 144 Pfam PF00581 Rhodanese-like domain 41 135 3.9E-20 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_A3628 040196b3ce16aca672dde38625b9d0fa 144 SMART SM00450 40 138 3.5E-22 T 15-10-2018 IPR001763 Rhodanese-like domain VIBNI_A3628 040196b3ce16aca672dde38625b9d0fa 144 Gene3D G3DSA:3.40.250.10 23 143 4.4E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily VIBNI_B0078 6a78b89b4354896ae0cb4635a46a37d0 352 SUPERFAMILY SSF81345 13 343 1.96E-75 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0078 6a78b89b4354896ae0cb4635a46a37d0 352 Gene3D G3DSA:1.10.3470.10 17 350 3.0E-95 T 15-10-2018 IPR037294 ABC transporter, BtuC-like VIBNI_B0078 6a78b89b4354896ae0cb4635a46a37d0 352 Pfam PF01032 FecCD transport family 31 344 1.4E-83 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VIBNI_B1317 ac4dc8f34d1509832cf4ca3904fd0743 169 SUPERFAMILY SSF55961 33 168 1.69E-8 T 15-10-2018 VIBNI_B1317 ac4dc8f34d1509832cf4ca3904fd0743 169 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 69 168 4.9E-9 T 15-10-2018 IPR019587 Polyketide cyclase/dehydrase VIBNI_B1317 ac4dc8f34d1509832cf4ca3904fd0743 169 Gene3D G3DSA:3.30.530.20 73 169 1.5E-5 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_A1487 e73f8e43f103f90eafd5bc33d51cf58b 259 Gene3D G3DSA:3.40.50.300 7 224 5.1E-24 T 15-10-2018 VIBNI_A1487 e73f8e43f103f90eafd5bc33d51cf58b 259 SUPERFAMILY SSF52540 23 227 1.18E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_A1196 56e7f01dc7d4336866cf783e32bd72ad 140 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 113 1.6E-16 T 15-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VIBNI_A1196 56e7f01dc7d4336866cf783e32bd72ad 140 Gene3D G3DSA:2.170.150.70 8 125 1.1E-14 T 15-10-2018 VIBNI_A1196 56e7f01dc7d4336866cf783e32bd72ad 140 SUPERFAMILY SSF51316 8 130 3.56E-37 T 15-10-2018 IPR011057 Mss4-like superfamily VIBNI_B0781 1683abc4a1dee348beb5fac2b17fd207 202 SUPERFAMILY SSF48150 12 189 7.46E-70 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VIBNI_B0781 1683abc4a1dee348beb5fac2b17fd207 202 Pfam PF03352 Methyladenine glycosylase 16 186 1.2E-71 T 15-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VIBNI_B0781 1683abc4a1dee348beb5fac2b17fd207 202 Gene3D G3DSA:1.10.340.30 11 193 4.4E-74 T 15-10-2018 VIBNI_B1886 0945cf79160c74fecd83167fbea38445 200 Pfam PF01810 LysE type translocator 14 191 6.7E-17 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1627 6a295d19fc7fc6c45c56b42a2918bf9e 242 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 114 222 3.4E-15 T 15-10-2018 IPR032871 AHH domain-containing protein VIBNI_B0351 ed5e1e40d0699da1816e6c9944e1ef1e 441 Pfam PF06812 ImpA, N-terminal, type VI secretion system 20 93 3.1E-7 T 15-10-2018 IPR010657 ImpA, N-terminal VIBNI_B1308 c8588e7028e3039b15b0a799431f8ef8 378 Pfam PF13729 F plasmid transfer operon, TraF, protein 46 295 5.4E-69 T 15-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VIBNI_A0435 be878b6ab4582e0bdea35cc2c9a29be2 389 Gene3D G3DSA:1.20.1250.20 10 194 6.8E-12 T 15-10-2018 VIBNI_A0435 be878b6ab4582e0bdea35cc2c9a29be2 389 SUPERFAMILY SSF103473 12 374 8.37E-36 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A0435 be878b6ab4582e0bdea35cc2c9a29be2 389 Gene3D G3DSA:1.20.1250.20 201 383 2.8E-13 T 15-10-2018 VIBNI_A0435 be878b6ab4582e0bdea35cc2c9a29be2 389 Pfam PF07690 Major Facilitator Superfamily 26 337 8.0E-16 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 SUPERFAMILY SSF48452 231 393 1.18E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 SMART SM00028 331 364 37.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 SMART SM00028 231 264 22.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 SMART SM00028 365 398 38.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 SMART SM00028 265 298 37.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VIBNI_A2999 ce90bc74a025d2a4b1c7a1340f9d92a3 422 Gene3D G3DSA:1.25.40.10 187 415 3.4E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0944 4b3369e4ac0d061ccd8590352737b4a5 283 SUPERFAMILY SSF69593 8 213 4.45E-26 T 15-10-2018 VIBNI_B0944 4b3369e4ac0d061ccd8590352737b4a5 283 Pfam PF01553 Acyltransferase 25 157 2.7E-19 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_B0944 4b3369e4ac0d061ccd8590352737b4a5 283 SMART SM00563 38 160 7.8E-19 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VIBNI_B0790 a254ce57fe1635ce435f35a210ab13ad 147 Pfam PF07681 DoxX 18 103 2.3E-22 T 15-10-2018 IPR032808 DoxX family VIBNI_A2115 128f646dd2a3fc9b72c34340eef130c7 109 Pfam PF09413 Putative prokaryotic signal transducing protein 2 67 4.1E-7 T 15-10-2018 IPR018551 Domain of unknown function DUF2007 VIBNI_B2025 54ad5ecc6ab3043149c1790efb61bea4 404 Pfam PF07690 Major Facilitator Superfamily 22 350 1.1E-39 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_B2025 54ad5ecc6ab3043149c1790efb61bea4 404 SUPERFAMILY SSF103473 9 391 1.7E-54 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B2025 54ad5ecc6ab3043149c1790efb61bea4 404 Gene3D G3DSA:1.20.1720.10 11 384 3.4E-82 T 15-10-2018 VIBNI_A0901 d614881623b7425c8a94082bdbed0ec7 261 Gene3D G3DSA:1.10.3720.10 57 258 4.1E-17 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0901 d614881623b7425c8a94082bdbed0ec7 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 250 2.7E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_A0901 d614881623b7425c8a94082bdbed0ec7 261 SUPERFAMILY SSF161098 63 250 2.49E-20 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A2198 2a30edb1fd76f2007de4608939c458b9 180 Pfam PF13505 Outer membrane protein beta-barrel domain 5 180 7.9E-15 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel VIBNI_A2198 2a30edb1fd76f2007de4608939c458b9 180 Gene3D G3DSA:2.40.160.20 18 180 9.7E-19 T 15-10-2018 VIBNI_A2198 2a30edb1fd76f2007de4608939c458b9 180 SUPERFAMILY SSF56925 21 180 1.96E-18 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VIBNI_B1203 b3f4f930fbf64c4b3bfff19e6046fe92 320 Gene3D G3DSA:1.50.10.150 8 310 8.7E-30 T 15-10-2018 IPR038665 Voltage-dependent anion channel superfamily VIBNI_B1203 b3f4f930fbf64c4b3bfff19e6046fe92 320 Pfam PF03595 Voltage-dependent anion channel 13 304 5.1E-25 T 15-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VIBNI_B0612 7f33ac7ac5bb0d5bb8620a165a2910a4 75 Pfam PF00550 Phosphopantetheine attachment site 10 68 1.1E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain VIBNI_B0612 7f33ac7ac5bb0d5bb8620a165a2910a4 75 SUPERFAMILY SSF47336 11 74 2.09E-12 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B0612 7f33ac7ac5bb0d5bb8620a165a2910a4 75 Gene3D G3DSA:1.10.1200.10 2 75 4.1E-22 T 15-10-2018 IPR036736 ACP-like superfamily VIBNI_B1372 6bf7b56e55eaef12857a4a32554f3d86 345 Pfam PF15575 Immunity protein 49 118 319 2.8E-9 T 15-10-2018 IPR029074 Immunity protein 49 VIBNI_B0158 6013088b8d344794d76effd46f36478f 246 Gene3D G3DSA:1.10.10.60 140 243 3.1E-16 T 15-10-2018 VIBNI_B0158 6013088b8d344794d76effd46f36478f 246 SUPERFAMILY SSF46689 194 238 2.15E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_B0158 6013088b8d344794d76effd46f36478f 246 SMART SM00342 158 240 4.3E-14 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_B0158 6013088b8d344794d76effd46f36478f 246 Pfam PF12833 Helix-turn-helix domain 164 238 1.2E-14 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VIBNI_A1125 c249e0dc7060eb44bf18081e13fdd9ec 165 SMART SM00448 4 125 2.3E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A1125 c249e0dc7060eb44bf18081e13fdd9ec 165 SUPERFAMILY SSF52172 1 142 1.07E-21 T 15-10-2018 IPR011006 CheY-like superfamily VIBNI_A1125 c249e0dc7060eb44bf18081e13fdd9ec 165 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-19 T 15-10-2018 VIBNI_A1125 c249e0dc7060eb44bf18081e13fdd9ec 165 Pfam PF00072 Response regulator receiver domain 6 125 2.1E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VIBNI_A3621 2bf23f6638a9de9fc18c622c179f5126 409 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 74 310 6.6E-28 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_A3621 2bf23f6638a9de9fc18c622c179f5126 409 Gene3D G3DSA:3.40.190.170 62 387 3.9E-51 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1656 d61f4219d9ef6e0f7d41e61fbab5552e 335 Pfam PF11279 Protein of unknown function (DUF3080) 30 333 7.9E-82 T 15-10-2018 IPR021431 Protein of unknown function DUF3080 VIBNI_A1577 60b61b1dad0ed1afc99325049b6593db 321 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 58 300 3.7E-38 T 15-10-2018 VIBNI_A1577 60b61b1dad0ed1afc99325049b6593db 321 Gene3D G3DSA:3.40.190.10 127 251 6.1E-21 T 15-10-2018 VIBNI_A1577 60b61b1dad0ed1afc99325049b6593db 321 SUPERFAMILY SSF53850 39 289 3.84E-13 T 15-10-2018 VIBNI_A1577 60b61b1dad0ed1afc99325049b6593db 321 Gene3D G3DSA:3.40.190.10 58 284 6.1E-21 T 15-10-2018 VIBNI_B1008 3b2f12dea46acd0222edb3085d81bcd5 267 SUPERFAMILY SSF56784 9 258 1.65E-25 T 15-10-2018 IPR036412 HAD-like superfamily VIBNI_B1008 3b2f12dea46acd0222edb3085d81bcd5 267 Gene3D G3DSA:3.40.50.1000 131 266 1.8E-6 T 15-10-2018 IPR023214 HAD superfamily VIBNI_B1008 3b2f12dea46acd0222edb3085d81bcd5 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 17 225 1.7E-20 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VIBNI_B1008 3b2f12dea46acd0222edb3085d81bcd5 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 88 3.4E-6 T 15-10-2018 VIBNI_B1008 3b2f12dea46acd0222edb3085d81bcd5 267 Gene3D G3DSA:3.40.50.1000 17 93 7.6E-11 T 15-10-2018 IPR023214 HAD superfamily VIBNI_A2510 25163ef0f1506cc83907f2c26f0b534a 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 3.6E-132 T 15-10-2018 IPR021936 Protein of unknown function DUF3549 VIBNI_B0310 f9c518524cf33da1eb2de0b73bf95487 225 Pfam PF13884 Chaperone of endosialidase 129 179 2.1E-15 T 15-10-2018 IPR030392 Intramolecular chaperone auto-processing domain VIBNI_A3808 12175aaa10f71cab518b105ee80d775b 151 Pfam PF07681 DoxX 27 108 6.1E-18 T 15-10-2018 IPR032808 DoxX family VIBNI_B0208 dfc8f4850171061eb980619a69c65435 132 Gene3D G3DSA:3.30.1330.40 6 131 3.7E-27 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0208 dfc8f4850171061eb980619a69c65435 132 SUPERFAMILY SSF55298 8 127 2.04E-28 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VIBNI_B0208 dfc8f4850171061eb980619a69c65435 132 Pfam PF01042 Endoribonuclease L-PSP 19 126 3.8E-20 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VIBNI_B0618 330d8150aadcbcb4c71435ee7c7cd722 393 Pfam PF00425 chorismate binding enzyme 121 375 8.2E-71 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VIBNI_B0618 330d8150aadcbcb4c71435ee7c7cd722 393 SUPERFAMILY SSF56322 17 384 1.06E-84 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_B0618 330d8150aadcbcb4c71435ee7c7cd722 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 105 382 1.8E-85 T 15-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VIBNI_B0618 330d8150aadcbcb4c71435ee7c7cd722 393 Gene3D G3DSA:3.60.120.10 3 390 9.7E-115 T 15-10-2018 IPR005801 ADC synthase GO:0009058 VIBNI_A2665 e5c869232fae2729ec11a70a4722fef5 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.6E-16 T 15-10-2018 IPR021494 Protein of unknown function DUF3149 VIBNI_A1253 d36677ad0dd321eddb86f56e890e46d8 247 SUPERFAMILY SSF56300 4 227 3.28E-34 T 15-10-2018 VIBNI_A1253 d36677ad0dd321eddb86f56e890e46d8 247 Pfam PF00149 Calcineurin-like phosphoesterase 15 110 4.7E-13 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VIBNI_A1253 d36677ad0dd321eddb86f56e890e46d8 247 Gene3D G3DSA:3.60.21.10 3 232 2.1E-45 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like VIBNI_B1652 48b0fcbac46c0143b0d94d47d2e86a4c 71 Pfam PF11137 Protein of unknown function (DUF2909) 6 64 5.8E-18 T 15-10-2018 IPR021313 Protein of unknown function DUF2909 VIBNI_A3355 55eae03895d2e636072a2bd419de6752 451 Pfam PF01554 MatE 255 406 9.9E-14 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3355 55eae03895d2e636072a2bd419de6752 451 Pfam PF01554 MatE 28 189 8.4E-26 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A3355 55eae03895d2e636072a2bd419de6752 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 422 2.5E-73 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0019 8ef0f7a9d3caee6aabcfa085e5975534 554 Pfam PF03961 Flagellar Assembly Protein A 81 546 3.9E-119 T 15-10-2018 IPR005646 Flagellar assembly protein A VIBNI_B0019 8ef0f7a9d3caee6aabcfa085e5975534 554 SUPERFAMILY SSF63848 282 313 7.72E-5 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VIBNI_A2013 50ae4d594f3d9d4fa99b2fa11c72d833 524 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 520 3.9E-136 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VIBNI_A2013 50ae4d594f3d9d4fa99b2fa11c72d833 524 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 15-10-2018 IPR018093 BCCT transporter, conserved site VIBNI_A2013 50ae4d594f3d9d4fa99b2fa11c72d833 524 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.7E-176 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VIBNI_B0525 f94dd363843bf1b289aaa4053c9a1f32 307 Gene3D G3DSA:1.10.3720.10 61 302 1.9E-70 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0525 f94dd363843bf1b289aaa4053c9a1f32 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 290 9.3E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0525 f94dd363843bf1b289aaa4053c9a1f32 307 SUPERFAMILY SSF161098 65 290 6.02E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1571 1e16425bf942d8ea64f0891e831742c7 333 Gene3D G3DSA:3.40.50.150 56 322 4.0E-74 T 15-10-2018 VIBNI_A1571 1e16425bf942d8ea64f0891e831742c7 333 SUPERFAMILY SSF53335 61 321 4.32E-26 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VIBNI_A1571 1e16425bf942d8ea64f0891e831742c7 333 Pfam PF05971 Protein of unknown function (DUF890) 25 322 2.5E-113 T 15-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VIBNI_A1571 1e16425bf942d8ea64f0891e831742c7 333 PIRSF PIRSF029038 11 333 5.8E-133 T 15-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VIBNI_A1571 1e16425bf942d8ea64f0891e831742c7 333 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 23 324 51.288 T 15-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VIBNI_B1796 49d6a09c357ea81f13903ebb47717941 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 308 8.1E-47 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0556 2319c892ca69e7eba1a2c24ab37050f7 257 SUPERFAMILY SSF111364 35 257 2.88E-19 T 15-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VIBNI_A0556 2319c892ca69e7eba1a2c24ab37050f7 257 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 46 257 5.9E-27 T 15-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VIBNI_A1636 a98983fb95f4013afa1565b19ae4f87e 497 Gene3D G3DSA:3.40.50.300 1 206 2.2E-39 T 15-10-2018 VIBNI_B0656 b6426a36bae1bc3cdb1974247ff4f61c 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 5.0E-50 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2196 0cd41250d7c503c884b7caf725a2074e 318 Gene3D G3DSA:3.40.50.1980 145 316 2.3E-53 T 15-10-2018 VIBNI_A2196 0cd41250d7c503c884b7caf725a2074e 318 SUPERFAMILY SSF53807 40 317 2.32E-45 T 15-10-2018 VIBNI_A2196 0cd41250d7c503c884b7caf725a2074e 318 Gene3D G3DSA:3.40.50.1980 19 141 2.4E-24 T 15-10-2018 VIBNI_A2196 0cd41250d7c503c884b7caf725a2074e 318 Pfam PF01497 Periplasmic binding protein 51 291 4.4E-27 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_A1925 7896ca2ad1a0d3387f1e08334892d0d4 72 Pfam PF04964 Flp/Fap pilin component 15 60 3.7E-14 T 15-10-2018 IPR007047 Flp/Fap pilin component VIBNI_A3370 435c8f0c38d24f4908df6820a689fff7 162 PIRSF PIRSF006291 1 161 1.1E-38 T 15-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VIBNI_A3370 435c8f0c38d24f4908df6820a689fff7 162 Gene3D G3DSA:3.30.1360.100 83 162 1.5E-31 T 15-10-2018 VIBNI_A3370 435c8f0c38d24f4908df6820a689fff7 162 SUPERFAMILY SSF103054 83 161 3.92E-25 T 15-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VIBNI_A3370 435c8f0c38d24f4908df6820a689fff7 162 Pfam PF04612 Type II secretion system (T2SS), protein M 1 160 2.1E-50 T 15-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VIBNI_B0942 8e3e64bd93f9b8c662f0105b2c289787 215 SMART SM00849 20 182 4.7E-6 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_B0942 8e3e64bd93f9b8c662f0105b2c289787 215 Pfam PF00753 Metallo-beta-lactamase superfamily 91 179 1.7E-5 T 15-10-2018 IPR001279 Metallo-beta-lactamase VIBNI_B0942 8e3e64bd93f9b8c662f0105b2c289787 215 SUPERFAMILY SSF56281 2 177 4.5E-30 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_B0942 8e3e64bd93f9b8c662f0105b2c289787 215 Gene3D G3DSA:3.60.15.10 17 192 3.4E-18 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VIBNI_A1468 f88d685f8426ff4954de6d6f42d184f3 207 PIRSF PIRSF006324 1 207 8.7E-63 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1468 f88d685f8426ff4954de6d6f42d184f3 207 Pfam PF01810 LysE type translocator 15 203 9.8E-38 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B0079 1f27c0a9f5d1af4d66c594bc718b2a98 380 Pfam PF01497 Periplasmic binding protein 83 327 8.7E-22 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain VIBNI_B0079 1f27c0a9f5d1af4d66c594bc718b2a98 380 SUPERFAMILY SSF53807 34 372 1.41E-43 T 15-10-2018 VIBNI_B0079 1f27c0a9f5d1af4d66c594bc718b2a98 380 Gene3D G3DSA:3.40.50.1980 30 380 2.5E-100 T 15-10-2018 VIBNI_B0710 572d16c3f8e8fd6883b81133946830bb 108 SUPERFAMILY SSF54427 10 101 9.19E-11 T 15-10-2018 IPR032710 NTF2-like domain superfamily VIBNI_B0710 572d16c3f8e8fd6883b81133946830bb 108 Gene3D G3DSA:3.10.450.50 2 103 1.9E-17 T 15-10-2018 VIBNI_B0710 572d16c3f8e8fd6883b81133946830bb 108 Pfam PF12680 SnoaL-like domain 11 97 7.3E-7 T 15-10-2018 IPR037401 SnoaL-like domain VIBNI_B1402 23e4e0f20f78c4bb5aa0b267622fd920 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 376 5.0E-29 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B1402 23e4e0f20f78c4bb5aa0b267622fd920 438 Gene3D G3DSA:3.40.190.10 21 438 3.4E-63 T 15-10-2018 VIBNI_B1402 23e4e0f20f78c4bb5aa0b267622fd920 438 SUPERFAMILY SSF53850 25 432 6.62E-57 T 15-10-2018 VIBNI_A1131 445d6ce18f9245c98386deaa8d74847d 339 Pfam PF13407 Periplasmic binding protein domain 28 296 2.1E-48 T 15-10-2018 IPR025997 Periplasmic binding protein VIBNI_A1131 445d6ce18f9245c98386deaa8d74847d 339 SUPERFAMILY SSF53822 7 323 1.5E-65 T 15-10-2018 IPR028082 Periplasmic binding protein-like I VIBNI_A1131 445d6ce18f9245c98386deaa8d74847d 339 Gene3D G3DSA:3.40.50.2300 29 296 6.6E-69 T 15-10-2018 VIBNI_A1131 445d6ce18f9245c98386deaa8d74847d 339 Gene3D G3DSA:3.40.50.2300 131 278 6.6E-69 T 15-10-2018 VIBNI_A2419 8195e6f8382cbd5f704f13ff43dce01a 185 SMART SM01144 1 177 1.3E-49 T 15-10-2018 IPR005636 DTW VIBNI_A2419 8195e6f8382cbd5f704f13ff43dce01a 185 Pfam PF03942 DTW domain 1 172 2.6E-44 T 15-10-2018 IPR005636 DTW VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 Pfam PF13411 MerR HTH family regulatory protein 3 70 8.8E-15 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.4E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.4E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.4E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 SUPERFAMILY SSF46955 1 101 1.06E-23 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 Gene3D G3DSA:1.10.1660.10 1 135 5.2E-26 T 15-10-2018 VIBNI_B0460 3cb7a9ee8f566c45da64d5c272602861 169 SMART SM00422 2 71 1.5E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VIBNI_A1670 4d0a379c2af02099e949044e0c811c5a 87 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.5E-35 T 15-10-2018 IPR021343 Protein of unknown function DUF2960 VIBNI_A0935 362ab92a849f83e6d096e5eff5fce4fa 351 SUPERFAMILY SSF53686 23 335 1.01E-71 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VIBNI_A0935 362ab92a849f83e6d096e5eff5fce4fa 351 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 2.6E-42 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VIBNI_A0935 362ab92a849f83e6d096e5eff5fce4fa 351 Gene3D G3DSA:3.40.50.1100 51 157 5.9E-69 T 15-10-2018 VIBNI_A0935 362ab92a849f83e6d096e5eff5fce4fa 351 Gene3D G3DSA:3.40.50.1100 24 324 5.9E-69 T 15-10-2018 VIBNI_A2188 a4279c5bf40742917dc2c545537646e1 100 SMART SM00886 2 98 1.1E-27 T 15-10-2018 IPR013097 Stress responsive alpha-beta barrel VIBNI_A2188 a4279c5bf40742917dc2c545537646e1 100 Gene3D G3DSA:3.30.70.100 1 100 1.7E-33 T 15-10-2018 VIBNI_A2188 a4279c5bf40742917dc2c545537646e1 100 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 7.7E-26 T 15-10-2018 IPR013097 Stress responsive alpha-beta barrel VIBNI_A2188 a4279c5bf40742917dc2c545537646e1 100 SUPERFAMILY SSF54909 2 98 9.12E-26 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A3117 56acd14e061a275f922af5d2014b45de 331 Pfam PF01435 Peptidase family M48 156 329 2.4E-23 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VIBNI_B0604 dec6369dbb896f0377e9bfcda9807990 534 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 243 530 7.0E-131 T 15-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type VIBNI_B0604 dec6369dbb896f0377e9bfcda9807990 534 Pfam PF02653 Branched-chain amino acid transport system / permease component 245 516 9.6E-51 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B0600 3a5cad485a327247ad3d82ce96e2795b 302 Hamap MF_01384 Urease accessory protein UreD [ureD]. 24 287 26.695 T 15-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 VIBNI_B0600 3a5cad485a327247ad3d82ce96e2795b 302 Pfam PF01774 UreD urease accessory protein 71 275 1.0E-42 T 15-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 VIBNI_A0041 1e6ccf0d93598ff70b3f0a2b236f98e9 417 Pfam PF08874 Domain of unknown function (DUF1835) 96 207 1.2E-12 T 15-10-2018 IPR014973 Protein of unknown function DUF1835 VIBNI_A2575 46e6c4b9d486e24d85d6a24adf35e0e4 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 2.9E-19 T 15-10-2018 IPR021249 Protein of unknown function DUF2788 VIBNI_A0034 854b2d67dbfb2108fc3918b3a4ffd861 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.0E-116 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VIBNI_A0034 854b2d67dbfb2108fc3918b3a4ffd861 485 Pfam PF02386 Cation transport protein 39 477 4.6E-88 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VIBNI_A0034 854b2d67dbfb2108fc3918b3a4ffd861 485 PIRSF PIRSF006247 1 485 2.7E-176 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VIBNI_A3683 3113b341f35463f815e5decb8157abc3 737 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 32 722 1.0E-245 T 15-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VIBNI_B1265 914bac4247c106c00f65f412530df3d6 172 Gene3D G3DSA:3.40.630.30 9 165 1.1E-28 T 15-10-2018 VIBNI_B1265 914bac4247c106c00f65f412530df3d6 172 SUPERFAMILY SSF55729 17 160 1.77E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1265 914bac4247c106c00f65f412530df3d6 172 Pfam PF00583 Acetyltransferase (GNAT) family 52 155 4.8E-11 T 15-10-2018 IPR000182 GNAT domain VIBNI_A0198 c77e74760134d81da44e894fe3f5200e 141 Pfam PF06853 Protein of unknown function (DUF1249) 23 135 4.2E-41 T 15-10-2018 IPR009659 Protein of unknown function DUF1249 VIBNI_B1099 9f99fa1a81a8577829630e838273fbcd 322 SUPERFAMILY SSF161098 92 301 2.75E-23 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1099 9f99fa1a81a8577829630e838273fbcd 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 314 1.7E-44 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1099 9f99fa1a81a8577829630e838273fbcd 322 Gene3D G3DSA:1.10.3720.10 86 312 7.9E-29 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1034 de767251467fd060fa5dc5151236f659 149 Pfam PF00583 Acetyltransferase (GNAT) family 30 108 1.6E-6 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1034 de767251467fd060fa5dc5151236f659 149 Gene3D G3DSA:3.40.630.30 18 141 6.9E-8 T 15-10-2018 VIBNI_B1034 de767251467fd060fa5dc5151236f659 149 SUPERFAMILY SSF55729 29 103 1.13E-9 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_A2032 4f72c7065177e87fa855f925fb4b6da1 226 Pfam PF11201 Protein of unknown function (DUF2982) 67 217 2.2E-59 T 15-10-2018 IPR021367 Protein of unknown function DUF2982 VIBNI_A2676 02d79cb5de97aaafbe42fc8e33c6ec2d 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.023 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A2676 02d79cb5de97aaafbe42fc8e33c6ec2d 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.5E-114 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A2676 02d79cb5de97aaafbe42fc8e33c6ec2d 283 Pfam PF00793 DAHP synthetase I family 14 274 5.3E-68 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VIBNI_A2676 02d79cb5de97aaafbe42fc8e33c6ec2d 283 SUPERFAMILY SSF51569 3 279 4.58E-103 T 15-10-2018 VIBNI_A2676 02d79cb5de97aaafbe42fc8e33c6ec2d 283 Gene3D G3DSA:3.20.20.70 1 283 7.1E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0577 d0f6d49294d077c42e1ab70db19415c2 259 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 191 208 - T 15-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VIBNI_A0577 d0f6d49294d077c42e1ab70db19415c2 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 225 1.8E-17 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VIBNI_B0348 88066518ef18aacd843d3f331c0e382a 223 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 40 223 4.7E-56 T 15-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VIBNI_B0348 88066518ef18aacd843d3f331c0e382a 223 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 38 223 2.3E-40 T 15-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VIBNI_A1065 677c0edb39906753236c9f7e76d7a316 187 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.6E-67 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VIBNI_A1065 677c0edb39906753236c9f7e76d7a316 187 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.961 T 15-10-2018 IPR022987 Uncharacterised protein family UPF0227 VIBNI_A1065 677c0edb39906753236c9f7e76d7a316 187 Gene3D G3DSA:3.40.50.1820 1 183 6.6E-17 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A1065 677c0edb39906753236c9f7e76d7a316 187 SUPERFAMILY SSF53474 2 173 5.91E-5 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A0560 4612bf5d574036a6a64153e05fb9c316 459 SUPERFAMILY SSF103473 10 435 9.16E-38 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_A0560 4612bf5d574036a6a64153e05fb9c316 459 Gene3D G3DSA:1.20.1250.20 245 437 1.4E-8 T 15-10-2018 VIBNI_A0560 4612bf5d574036a6a64153e05fb9c316 459 Gene3D G3DSA:1.20.1250.20 10 220 1.3E-12 T 15-10-2018 VIBNI_A0560 4612bf5d574036a6a64153e05fb9c316 459 Pfam PF07690 Major Facilitator Superfamily 22 395 3.4E-19 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VIBNI_A0594 e0f26170e17a15c2a25db896d800b11c 255 SUPERFAMILY SSF58113 173 249 7.85E-6 T 15-10-2018 VIBNI_A0594 e0f26170e17a15c2a25db896d800b11c 255 Pfam PF11101 Protein of unknown function (DUF2884) 29 253 3.0E-66 T 15-10-2018 IPR021307 Protein of unknown function DUF2884 VIBNI_A0141 3d6c244d9abddc27ab800a1c13cfb14b 717 SUPERFAMILY SSF117892 56 190 2.88E-10 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily VIBNI_A1565 cf55d0a5fd921ce87c9ccce1e69f9f3e 195 SUPERFAMILY SSF81606 4 192 8.76E-10 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1565 cf55d0a5fd921ce87c9ccce1e69f9f3e 195 Gene3D G3DSA:3.60.40.10 3 191 3.6E-32 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1565 cf55d0a5fd921ce87c9ccce1e69f9f3e 195 SMART SM00331 5 192 0.0017 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A1565 cf55d0a5fd921ce87c9ccce1e69f9f3e 195 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 29 192 1.7E-9 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VIBNI_A0693 c48fbb0a856fabdedf45a6289d207899 59 Pfam PF11446 Protein of unknown function (DUF2897) 4 54 1.1E-21 T 15-10-2018 IPR021550 Protein of unknown function DUF2897 VIBNI_A1025 edc7466cb42f509608f382595e66ea1c 453 SUPERFAMILY SSF56935 34 453 2.2E-66 T 15-10-2018 VIBNI_A1025 edc7466cb42f509608f382595e66ea1c 453 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 30 453 5.2E-84 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBNI_A1025 edc7466cb42f509608f382595e66ea1c 453 Gene3D G3DSA:2.40.160.60 34 453 3.1E-99 T 15-10-2018 VIBNI_B1740 6afe700e2efa0b87254866944f0aadf5 534 SUPERFAMILY SSF53474 75 465 2.25E-27 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1740 6afe700e2efa0b87254866944f0aadf5 534 Pfam PF00561 alpha/beta hydrolase fold 114 245 1.6E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_B1740 6afe700e2efa0b87254866944f0aadf5 534 Pfam PF08386 TAP-like protein 406 502 2.2E-14 T 15-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal VIBNI_B0909 6378165ed203ff8e684e07efa40130cf 195 PIRSF PIRSF011489 1 195 4.4E-80 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VIBNI_B0909 6378165ed203ff8e684e07efa40130cf 195 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.4E-29 T 15-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VIBNI_B2015 4e1aa383b99309416504e0563b75815c 152 Pfam PF15428 Immunity protein 26 7 97 1.5E-13 T 15-10-2018 IPR029278 Immunity protein 26 VIBNI_A0104 0464802790de077cd0b557bcbd8d3433 86 Gene3D G3DSA:1.10.150.250 1 86 2.2E-36 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VIBNI_A0104 0464802790de077cd0b557bcbd8d3433 86 SUPERFAMILY SSF109910 3 79 2.09E-25 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VIBNI_A0104 0464802790de077cd0b557bcbd8d3433 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 76 1.0E-24 T 15-10-2018 IPR005631 Flavinator of succinate dehydrogenase VIBNI_A3248 9ac174d46f9a3fee76f6af8d4c9ab661 483 Gene3D G3DSA:3.30.450.20 127 230 1.8E-8 T 15-10-2018 VIBNI_A3248 9ac174d46f9a3fee76f6af8d4c9ab661 483 SUPERFAMILY SSF103190 113 235 1.73E-7 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VIBNI_A0682 e95593ba54af2ea5e4bf965cb232b1ca 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 6.1E-31 T 15-10-2018 IPR006696 Protein of unknown function DUF423 VIBNI_A2712 83fa0b1d5ba837fd7725aab9fbdf1204 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 9.9E-40 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VIBNI_A2712 83fa0b1d5ba837fd7725aab9fbdf1204 105 SUPERFAMILY SSF81301 2 105 8.99E-39 T 15-10-2018 VIBNI_A2712 83fa0b1d5ba837fd7725aab9fbdf1204 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.492 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VIBNI_A2712 83fa0b1d5ba837fd7725aab9fbdf1204 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 6.6E-29 T 15-10-2018 VIBNI_A2712 83fa0b1d5ba837fd7725aab9fbdf1204 105 Gene3D G3DSA:3.30.460.10 2 105 3.2E-38 T 15-10-2018 VIBNI_A2403 03d09fc305be521dae486ffcf284dfe4 322 Pfam PF11335 Protein of unknown function (DUF3137) 169 314 2.3E-41 T 15-10-2018 IPR021484 Protein of unknown function DUF3137 VIBNI_B2073 645b1d91f2e3715ea5890bd11bb919a0 78 Pfam PF11391 Protein of unknown function (DUF2798) 9 65 4.9E-19 T 15-10-2018 IPR021529 Protein of unknown function DUF2798 VIBNI_A2588 83a9e9fb08914df82696c24fcd59605c 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 316 1.9E-36 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1355 5d8775217c4a5c02842cd5784bee670f 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 2.7E-35 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1355 5d8775217c4a5c02842cd5784bee670f 362 SUPERFAMILY SSF161098 126 343 8.9E-16 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1355 5d8775217c4a5c02842cd5784bee670f 362 Gene3D G3DSA:1.10.3720.10 121 352 7.1E-19 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0088 e101db5a6beda8f97418217d89426151 210 Pfam PF01810 LysE type translocator 15 201 3.0E-41 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A1744 52f8d820088cd3fa4f0695fba49d8ca5 58 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 8.0E-12 T 15-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VIBNI_B1821 d44795cfd07e3f64814d39862e621cec 333 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 6.4E-29 T 15-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase VIBNI_B1221 9b7f360cfc8b95abd7f235a8480f9674 162 Pfam PF00583 Acetyltransferase (GNAT) family 43 132 1.0E-6 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1221 9b7f360cfc8b95abd7f235a8480f9674 162 SUPERFAMILY SSF55729 43 133 2.7E-11 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1221 9b7f360cfc8b95abd7f235a8480f9674 162 Gene3D G3DSA:3.40.630.30 2 134 1.7E-9 T 15-10-2018 VIBNI_A3677 3f12928126b4c8486165c52426c3d7c6 441 Gene3D G3DSA:2.40.160.130 43 420 8.2E-41 T 15-10-2018 IPR038636 Capsule assembly protein Wzi superfamily VIBNI_A3677 3f12928126b4c8486165c52426c3d7c6 441 Pfam PF14052 Capsule assembly protein Wzi 124 285 5.2E-19 T 15-10-2018 IPR026950 Capsule assembly protein Wzi VIBNI_B1752 44e0c30cc2d7f6872e5a525f02c2fe79 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 3.6E-35 T 15-10-2018 IPR007553 Domain of unknown function DUF523 VIBNI_B1752 44e0c30cc2d7f6872e5a525f02c2fe79 317 PIRSF PIRSF037004 1 317 1.3E-132 T 15-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VIBNI_B1752 44e0c30cc2d7f6872e5a525f02c2fe79 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 2.2E-43 T 15-10-2018 IPR013560 Domain of unknown function DUF1722 VIBNI_A2373 932413b2c580c23db4401fb834327e87 198 PIRSF PIRSF011444 4 197 5.8E-73 T 15-10-2018 IPR009706 Protein of unknown function DUF1287 VIBNI_A2373 932413b2c580c23db4401fb834327e87 198 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 40 194 4.0E-45 T 15-10-2018 IPR009706 Protein of unknown function DUF1287 VIBNI_A2373 932413b2c580c23db4401fb834327e87 198 Pfam PF06940 Domain of unknown function (DUF1287) 30 194 1.1E-66 T 15-10-2018 IPR009706 Protein of unknown function DUF1287 VIBNI_A0762 0e34a3581cae9c835379e35eb6aa5e26 409 SUPERFAMILY SSF56935 26 409 4.58E-84 T 15-10-2018 VIBNI_A0762 0e34a3581cae9c835379e35eb6aa5e26 409 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 409 4.8E-99 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VIBNI_A0762 0e34a3581cae9c835379e35eb6aa5e26 409 Gene3D G3DSA:2.40.160.60 26 409 3.6E-105 T 15-10-2018 VIBNI_B1685 be2d06267ecc981728c003e5074be352 200 Pfam PF01810 LysE type translocator 13 199 1.3E-41 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A0748 c3e2b02ac764f35a3164e27288b7d07f 429 Pfam PF01584 CheW-like domain 284 417 3.6E-13 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0748 c3e2b02ac764f35a3164e27288b7d07f 429 PIRSF PIRSF020479 5 429 2.7E-109 T 15-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VIBNI_A0748 c3e2b02ac764f35a3164e27288b7d07f 429 SUPERFAMILY SSF50341 281 418 8.76E-14 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VIBNI_A0748 c3e2b02ac764f35a3164e27288b7d07f 429 SMART SM00260 280 415 1.2E-4 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 206 225 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 349 371 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 303 321 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 410 430 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 PRINTS PR00175 Sodium/alanine symporter signature 178 196 6.3E-57 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.3E-160 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0297 cb71aeefe433f800cbe7803087f92fe8 478 Pfam PF01235 Sodium:alanine symporter family 48 453 6.1E-161 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VIBNI_A0703 6321cdd2dbce157e5a6e45b60b7132a3 299 SUPERFAMILY SSF54909 1 296 3.75E-88 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A0703 6321cdd2dbce157e5a6e45b60b7132a3 299 Pfam PF04261 Dyp-type peroxidase family 5 292 1.5E-82 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VIBNI_A0703 6321cdd2dbce157e5a6e45b60b7132a3 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 291 1.7E-79 T 15-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VIBNI_A1404 d7d0f2edd68e02a5bf3d0961a4c1962c 251 Gene3D G3DSA:2.50.20.10 16 247 1.0E-59 T 15-10-2018 VIBNI_A1404 d7d0f2edd68e02a5bf3d0961a4c1962c 251 Pfam PF17131 Outer membrane lipoprotein-sorting protein 67 247 3.4E-53 T 15-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VIBNI_A2858 033b39725d9f815d48ea2da28d0726d5 678 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 177 465 1.3E-11 T 15-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VIBNI_A2858 033b39725d9f815d48ea2da28d0726d5 678 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 27 169 1.5E-9 T 15-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VIBNI_B0226 dee576c53e8984e38cfc965dd0bdb15c 413 Gene3D G3DSA:3.40.190.10 58 360 1.9E-48 T 15-10-2018 VIBNI_B0226 dee576c53e8984e38cfc965dd0bdb15c 413 Gene3D G3DSA:3.40.190.10 138 399 1.9E-48 T 15-10-2018 VIBNI_B0226 dee576c53e8984e38cfc965dd0bdb15c 413 SUPERFAMILY SSF53850 58 409 1.02E-51 T 15-10-2018 VIBNI_B0226 dee576c53e8984e38cfc965dd0bdb15c 413 Pfam PF13416 Bacterial extracellular solute-binding protein 58 337 6.8E-22 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein VIBNI_B0333 698ec6b1c8d9cfbf900783c5699117a8 304 SUPERFAMILY SSF48403 44 206 7.09E-19 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_B0333 698ec6b1c8d9cfbf900783c5699117a8 304 Gene3D G3DSA:1.25.40.20 40 240 1.3E-23 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_B1843 e33e1eab92d0e122d3cead190c51fbc5 208 PIRSF PIRSF006324 1 207 2.2E-55 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1843 e33e1eab92d0e122d3cead190c51fbc5 208 Pfam PF01810 LysE type translocator 17 203 1.3E-28 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_B1565 b35b5a9ad60582fbb5acb6c80b61c4b1 306 Pfam PF04018 Domain of unknown function (DUF368) 13 257 1.5E-96 T 15-10-2018 IPR007163 Protein of unknown function DUF368 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 SUPERFAMILY SSF51569 4 424 1.59E-164 T 15-10-2018 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 Gene3D G3DSA:1.10.400.20 288 411 4.0E-173 T 15-10-2018 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 Gene3D G3DSA:3.20.20.70 8 416 4.0E-173 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 3.7E-206 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 3.3E-195 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_A0978 c4b7a33b83725dc3a4f486bae53c00fd 435 PIRSF PIRSF009264 1 430 5.8E-197 T 15-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VIBNI_B1800 95dc5b77bd0100d02b94de9bcdec7c75 139 Pfam PF13673 Acetyltransferase (GNAT) domain 32 122 8.2E-15 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1800 95dc5b77bd0100d02b94de9bcdec7c75 139 SUPERFAMILY SSF55729 3 138 4.09E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1800 95dc5b77bd0100d02b94de9bcdec7c75 139 Gene3D G3DSA:3.40.630.30 35 138 2.6E-28 T 15-10-2018 VIBNI_A0523 9b952b24241b12413edd47b6e92a7824 495 SUPERFAMILY SSF56300 159 374 1.36E-11 T 15-10-2018 VIBNI_A0523 9b952b24241b12413edd47b6e92a7824 495 Gene3D G3DSA:3.60.21.70 186 486 5.8E-9 T 15-10-2018 IPR038607 PhoD-like superfamily VIBNI_B0040 9cc9c2df56617967141f513c520db844 232 SUPERFAMILY SSF53720 10 176 1.39E-8 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VIBNI_B0040 9cc9c2df56617967141f513c520db844 232 Gene3D G3DSA:3.40.605.10 7 182 1.1E-6 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VIBNI_A1353 c93835b29af757db1499c247301283b8 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 5.2E-37 T 15-10-2018 IPR021284 Protein of unknown function DUF2750 VIBNI_B0872 a45b92776b4e8e16c295cf2910d9d04b 276 SUPERFAMILY SSF161098 5 267 1.96E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0872 a45b92776b4e8e16c295cf2910d9d04b 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 260 8.9E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0872 a45b92776b4e8e16c295cf2910d9d04b 276 Gene3D G3DSA:1.10.3720.10 2 262 3.2E-45 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A0353 25ea8da914b00ba699cdcdaf343d3ede 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 4.6E-19 T 15-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VIBNI_A0353 25ea8da914b00ba699cdcdaf343d3ede 382 Pfam PF02690 Na+/Pi-cotransporter 30 153 6.6E-22 T 15-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VIBNI_A0598 66f7ea1786bbe1e1015020d865d15296 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 3.4E-34 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 VIBNI_A0598 66f7ea1786bbe1e1015020d865d15296 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 3.0E-23 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 VIBNI_A0598 66f7ea1786bbe1e1015020d865d15296 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 28.258 T 15-10-2018 IPR009624 Uncharacterised protein family UPF0253 VIBNI_B0175 70e175b160a7df05e174b6d5361d6b03 272 Pfam PF01925 Sulfite exporter TauE/SafE 16 252 1.0E-41 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A1633 7c0a804d8aae0655b89076a3429550d4 134 Pfam PF11351 Holin of 3TMs, for gene-transfer release 9 90 4.0E-11 T 15-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release VIBNI_B0858 b84eef3eca6c125892740586691a44ef 98 Gene3D G3DSA:3.30.70.860 1 98 6.8E-38 T 15-10-2018 IPR035571 UPF0234-like, C-terminal VIBNI_B0858 b84eef3eca6c125892740586691a44ef 98 Pfam PF04175 Protein of unknown function (DUF406) 6 94 2.9E-29 T 15-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 SMART SM00248 74 103 0.0045 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 SMART SM00248 41 70 2100.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 SMART SM00248 107 136 85.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 SUPERFAMILY SSF48403 45 153 7.15E-26 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 Pfam PF12796 Ankyrin repeats (3 copies) 48 138 2.5E-13 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain VIBNI_B0574 652e849d5a991f4d0262af6e2c234b34 160 Gene3D G3DSA:1.25.40.20 20 154 7.9E-27 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VIBNI_A3318 f8832e30b806cca68b26442eb2297ad0 108 SUPERFAMILY SSF54909 4 67 3.89E-5 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B0589 a52421eb69a6e2426c3759321d8d3b0d 738 SUPERFAMILY SSF51126 186 530 9.14E-9 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor VIBNI_A0430 ebbbd6ac2a8557fe06322fcd85ff282f 337 Pfam PF01136 Peptidase family U32 75 336 5.6E-68 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VIBNI_A0430 ebbbd6ac2a8557fe06322fcd85ff282f 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VIBNI_A3620 48a5fd49acde300d5e327ee803968001 207 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 59 191 5.8E-20 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B0966 1b08a159300ac6ec8026378e913f8f16 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 172 7.9E-21 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A0759 f8c88670b02f4c1ceec6aca774dfbf4f 406 SUPERFAMILY SSF48452 164 267 5.31E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0759 f8c88670b02f4c1ceec6aca774dfbf4f 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 8.7E-30 T 15-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VIBNI_A0759 f8c88670b02f4c1ceec6aca774dfbf4f 406 Pfam PF14559 Tetratricopeptide repeat 177 245 4.0E-8 T 15-10-2018 VIBNI_A0759 f8c88670b02f4c1ceec6aca774dfbf4f 406 Gene3D G3DSA:1.25.40.10 154 292 1.0E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A1998 f607abc2bdd4328e1744817153564639 163 Pfam PF06271 RDD family 15 142 4.2E-26 T 15-10-2018 IPR010432 RDD VIBNI_A2475 911b3280e406d86fe5b53180d150813b 856 Gene3D G3DSA:2.60.20.40 125 222 2.0E-43 T 15-10-2018 VIBNI_A2475 911b3280e406d86fe5b53180d150813b 856 Gene3D G3DSA:2.60.20.40 26 124 1.6E-43 T 15-10-2018 VIBNI_A3018 534ddfc10c3238797dd09b80218e97af 307 PIRSF PIRSF015558 7 297 4.6E-55 T 15-10-2018 IPR016634 WYL domain protein, s026 type VIBNI_B1036 340fc47f6a47a13c2ad96321caaf76d2 291 Pfam PF02698 DUF218 domain 6 131 2.8E-15 T 15-10-2018 IPR003848 Domain of unknown function DUF218 VIBNI_A2604 2557350ce1d5a9bc25603f337a140cb3 254 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 4.1E-36 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A1822 768a8dd4c0f35d7801b1b8d11b314dc1 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 4.3E-33 T 15-10-2018 IPR021284 Protein of unknown function DUF2750 VIBNI_A1930 3347b38feb6d5ef8538bce8ec2ce65d0 172 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 156 9.8E-27 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A0485 37c86e00600129f7bc3b944f203f18b8 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 303 3.1E-32 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0235 4f7533f4da046de37310c8a1512a8de8 156 Pfam PF05258 Protein of unknown function (DUF721) 11 85 1.2E-11 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VIBNI_A3100 87845603097f131bb91035ceb626aea7 62 Pfam PF11747 Killing trait 21 60 2.5E-10 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_A0625 08cc323c9b7bc287eca4b442218cd71d 259 Pfam PF00950 ABC 3 transport family 161 239 1.7E-5 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VIBNI_A0625 08cc323c9b7bc287eca4b442218cd71d 259 Pfam PF00950 ABC 3 transport family 5 151 4.8E-5 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VIBNI_A2467 66f2bef33c92696d94449fe8c5be7afd 178 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 168 2.0E-23 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B1824 d7379346e5621bd4fc030ad5b88008d9 202 Pfam PF01810 LysE type translocator 12 191 7.2E-11 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VIBNI_A3523 dadda4d2630b70532736af539870c4d0 282 Gene3D G3DSA:2.60.120.730 11 146 2.4E-8 T 15-10-2018 VIBNI_A3548 14d85df76c49413b922bd255ba848c6e 252 SUPERFAMILY SSF56935 35 220 9.66E-5 T 15-10-2018 VIBNI_A3548 14d85df76c49413b922bd255ba848c6e 252 Pfam PF04338 Protein of unknown function, DUF481 37 252 1.4E-49 T 15-10-2018 IPR007433 Protein of unknown function DUF481 VIBNI_A1890 c726aaa01cac7b1fe2200f1f421f594f 315 Gene3D G3DSA:2.60.120.650 4 261 4.9E-34 T 15-10-2018 VIBNI_A1890 c726aaa01cac7b1fe2200f1f421f594f 315 SUPERFAMILY SSF51197 24 266 1.51E-30 T 15-10-2018 VIBNI_A1890 c726aaa01cac7b1fe2200f1f421f594f 315 Pfam PF13621 Cupin-like domain 35 261 6.7E-20 T 15-10-2018 VIBNI_A0684 a1f0188cbd5e9240f0fcb7a0e0d7bcea 138 Pfam PF09842 Predicted membrane protein (DUF2069) 12 114 6.7E-35 T 15-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VIBNI_A1475 9c4cc31a9b24707a8d64432f5f569f68 391 Pfam PF13641 Glycosyltransferase like family 2 56 276 4.4E-17 T 15-10-2018 VIBNI_A1475 9c4cc31a9b24707a8d64432f5f569f68 391 SUPERFAMILY SSF53448 48 307 4.03E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A1475 9c4cc31a9b24707a8d64432f5f569f68 391 Gene3D G3DSA:3.90.550.10 37 272 7.6E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 Gene3D G3DSA:3.40.190.10 115 219 3.9E-92 T 15-10-2018 VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.5E-124 T 15-10-2018 IPR004872 Lipoprotein NlpA family VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 Gene3D G3DSA:3.40.190.10 34 263 3.9E-92 T 15-10-2018 VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 SUPERFAMILY SSF53850 32 269 2.09E-77 T 15-10-2018 VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 PIRSF PIRSF002854 1 269 5.8E-97 T 15-10-2018 IPR004872 Lipoprotein NlpA family VIBNI_A2734 fb8136955a098b1483420caf75e4f4da 269 Pfam PF03180 NLPA lipoprotein 33 269 3.2E-96 T 15-10-2018 IPR004872 Lipoprotein NlpA family VIBNI_B1728 fe528e96147da48f308b22279700dce7 187 Pfam PF07603 Protein of unknown function (DUF1566) 41 178 3.4E-23 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_A1860 e3e3aa6b2aea088a1418673d2708d3a2 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 169 3.0E-26 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A3744 6f95c1d37fbfd4bd794c0c0c0bdf80d0 206 Pfam PF07947 YhhN family 20 198 9.1E-17 T 15-10-2018 IPR012506 YhhN-like GO:0016021 VIBNI_A0897 7cf4cd3d60f40a6726b555970ccfc189 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 4.2E-73 T 15-10-2018 IPR020206 Uncharacterised protein family, VP2110 VIBNI_A0897 7cf4cd3d60f40a6726b555970ccfc189 145 Gene3D G3DSA:1.25.40.10 8 117 1.2E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0897 7cf4cd3d60f40a6726b555970ccfc189 145 SUPERFAMILY SSF48452 5 83 7.05E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_A0897 7cf4cd3d60f40a6726b555970ccfc189 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 2.0E-57 T 15-10-2018 IPR020206 Uncharacterised protein family, VP2110 VIBNI_A3614 a62da9ac378d247f0ed5a7119aa63cec 109 Pfam PF11333 Protein of unknown function (DUF3135) 10 89 1.9E-31 T 15-10-2018 IPR021482 Protein of unknown function DUF3135 VIBNI_B0812 aa49f211a6a8e8a5199d039d358b8791 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 5.9E-32 T 15-10-2018 IPR032036 Protein of unknown function DUF5062 VIBNI_B0812 aa49f211a6a8e8a5199d039d358b8791 86 Gene3D G3DSA:1.20.120.1930 1 86 1.4E-39 T 15-10-2018 VIBNI_B2035 e810fd17962aa9afca89f46dd9889e7f 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 2.8E-40 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0790 66b71b49481b9aad34560db302d9502b 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 315 4.7E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2100 9047c025e6488c548669c3fa607cc2b4 394 Gene3D G3DSA:1.20.1250.20 207 389 3.4E-11 T 15-10-2018 VIBNI_A2100 9047c025e6488c548669c3fa607cc2b4 394 Gene3D G3DSA:1.20.1250.20 4 192 2.4E-9 T 15-10-2018 VIBNI_A2100 9047c025e6488c548669c3fa607cc2b4 394 SUPERFAMILY SSF103473 11 383 5.23E-26 T 15-10-2018 IPR036259 MFS transporter superfamily VIBNI_B1865 874227d5e0e4bdffc3da2970f0977ea1 196 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 2 186 1.2E-45 T 15-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 VIBNI_B1865 874227d5e0e4bdffc3da2970f0977ea1 196 PIRSF PIRSF007531 1 194 7.0E-45 T 15-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 VIBNI_B1865 874227d5e0e4bdffc3da2970f0977ea1 196 Gene3D G3DSA:3.40.50.300 1 187 8.8E-52 T 15-10-2018 VIBNI_B1865 874227d5e0e4bdffc3da2970f0977ea1 196 SUPERFAMILY SSF52540 3 188 1.09E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1469 d43b2405c75f88c0915ec3c2039b38fc 420 SUPERFAMILY SSF56954 3 409 1.57E-75 T 15-10-2018 VIBNI_B1469 d43b2405c75f88c0915ec3c2039b38fc 420 Pfam PF02321 Outer membrane efflux protein 226 403 1.8E-28 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_B1469 d43b2405c75f88c0915ec3c2039b38fc 420 Pfam PF02321 Outer membrane efflux protein 24 199 3.0E-27 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VIBNI_B1469 d43b2405c75f88c0915ec3c2039b38fc 420 Gene3D G3DSA:1.20.1600.10 22 420 1.4E-75 T 15-10-2018 VIBNI_A1964 b1e051a83bcee3440d1de455b980a803 219 Pfam PF09335 SNARE associated Golgi protein 65 181 1.4E-23 T 15-10-2018 IPR032816 SNARE associated Golgi protein VIBNI_B1729 5e850e4a5201dcf20f203484ee13ca34 521 Pfam PF07603 Protein of unknown function (DUF1566) 308 464 1.7E-13 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 VIBNI_A0777 2ea16732c89d6b4d3a5df895d6f1929b 89 Pfam PF08891 YfcL protein 4 84 7.3E-33 T 15-10-2018 IPR014987 Uncharacterised protein family YfcL VIBNI_B1617 174bb306219e760bff14c910d0c77926 326 Pfam PF04230 Polysaccharide pyruvyl transferase 45 287 2.6E-19 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase VIBNI_A1919 d0b67d3b19c4088e64066f2392aa6471 303 Pfam PF00482 Type II secretion system (T2SS), protein F 136 260 1.1E-16 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_B1094 8a92f5fd1b7d6e18cfa88e4dd020b17f 210 Pfam PF09997 Predicted membrane protein (DUF2238) 44 180 2.7E-50 T 15-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VIBNI_B1094 8a92f5fd1b7d6e18cfa88e4dd020b17f 210 PIRSF PIRSF020606 3 203 1.8E-72 T 15-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VIBNI_B0457 014aa5a23c696e42571b9be829a8f2a5 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 1.7E-38 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A1461 f004679d32ebfafd8de756e894115ce4 167 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 164 9.4E-21 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VIBNI_A1461 f004679d32ebfafd8de756e894115ce4 167 SUPERFAMILY SSF55961 10 165 1.85E-30 T 15-10-2018 VIBNI_A1461 f004679d32ebfafd8de756e894115ce4 167 Gene3D G3DSA:3.30.530.20 6 166 8.5E-36 T 15-10-2018 IPR023393 START-like domain superfamily VIBNI_B2033 ac1d4424148dfe73f82eb2282fd6a237 344 Pfam PF04116 Fatty acid hydroxylase superfamily 187 316 6.0E-16 T 15-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VIBNI_A2116 b74bd86c459e4b75dd3bff3dcb3c85e4 265 Pfam PF00561 alpha/beta hydrolase fold 19 121 5.8E-21 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VIBNI_A2116 b74bd86c459e4b75dd3bff3dcb3c85e4 265 SUPERFAMILY SSF53474 11 261 7.95E-45 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_A2116 b74bd86c459e4b75dd3bff3dcb3c85e4 265 Gene3D G3DSA:3.40.50.1820 6 263 1.6E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1141 9d0f972117b3353d5942e31657b24a6d 383 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 298 3.2E-65 T 15-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VIBNI_A1580 6146bbd9f11e83b7a76e8986717362db 266 SUPERFAMILY SSF53850 40 248 1.04E-12 T 15-10-2018 VIBNI_B1513 03ac4e78557caeba90d7d17ebaa8e392 155 SUPERFAMILY SSF55729 1 153 2.06E-34 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase VIBNI_B1513 03ac4e78557caeba90d7d17ebaa8e392 155 Pfam PF13673 Acetyltransferase (GNAT) domain 28 148 3.4E-18 T 15-10-2018 IPR000182 GNAT domain VIBNI_B1513 03ac4e78557caeba90d7d17ebaa8e392 155 Gene3D G3DSA:3.40.630.30 1 155 4.1E-41 T 15-10-2018 VIBNI_A3737 1f242f855ae7c07884f5ea70249fb104 310 PIRSF PIRSF003097 11 306 2.2E-56 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VIBNI_A3642 1f8a03084826854af879e16afbb5a576 255 Pfam PF01061 ABC-2 type transporter 9 216 6.5E-18 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VIBNI_A2209 22b939ab5d1c3435060bb53b210bc671 219 Pfam PF11140 Protein of unknown function (DUF2913) 4 212 2.7E-73 T 15-10-2018 IPR021316 Protein of unknown function DUF2913 VIBNI_A1545 b242db75004eb087ca4014bf6daf0dde 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 322 6.8E-39 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0732 c9ac4ec9596a3ec5bd78b09040252089 126 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 4.9E-20 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VIBNI_A0732 c9ac4ec9596a3ec5bd78b09040252089 126 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 5.0E-23 T 15-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VIBNI_A1977 339b4877486c95b338c81e3203347538 340 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 52 335 6.2E-80 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 VIBNI_A1977 339b4877486c95b338c81e3203347538 340 Pfam PF05128 Domain of unknown function (DUF697) 177 335 2.5E-49 T 15-10-2018 IPR021147 Protein of unknown function DUF697 VIBNI_B0857 af14320fca69f88f32d1f74ccdd3f2ea 83 Pfam PF07383 Protein of unknown function (DUF1496) 28 80 1.4E-22 T 15-10-2018 IPR009971 Protein of unknown function DUF1496 VIBNI_B1267 7e1a219fdfedded108f0a5bb6d1c436a 176 Pfam PF10947 Protein of unknown function (DUF2628) 41 127 6.5E-9 T 15-10-2018 IPR024399 Protein of unknown function DUF2628 VIBNI_B2131 3e1d0a063093b8c37943bb6f749a40ad 180 Pfam PF14096 Domain of unknown function (DUF4274) 64 120 1.5E-13 T 15-10-2018 IPR025369 Domain of unknown function DUF4274 VIBNI_A1311 4bf04fe2b98eb16799c60641c00ed635 280 SUPERFAMILY SSF50182 96 169 3.6E-10 T 15-10-2018 IPR010920 LSM domain superfamily VIBNI_A1311 4bf04fe2b98eb16799c60641c00ed635 280 Pfam PF00924 Mechanosensitive ion channel 57 183 8.0E-17 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 Gene3D G3DSA:1.10.10.10 3 111 5.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 SUPERFAMILY SSF46785 1 107 1.87E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 Pfam PF12840 Helix-turn-helix domain 12 69 1.7E-11 T 15-10-2018 VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 SMART SM00418 11 92 5.5E-15 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 4.5E-5 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B1928 ea8d4f74c63d5421b252ad84dde1f432 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 4.5E-5 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VIBNI_B0275 961ecda04b7bbe494b098b66232c77f5 458 Pfam PF01554 MatE 30 191 5.2E-22 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0275 961ecda04b7bbe494b098b66232c77f5 458 Pfam PF01554 MatE 277 404 5.3E-17 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0275 961ecda04b7bbe494b098b66232c77f5 458 PIRSF PIRSF006603 5 449 3.2E-77 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A0533 09468853818c390d6eb0ba51b968fe23 234 SUPERFAMILY SSF49354 18 161 2.09E-11 T 15-10-2018 IPR008962 PapD-like superfamily VIBNI_A0533 09468853818c390d6eb0ba51b968fe23 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 159 3.3E-6 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VIBNI_A0053 71fb05cba87122e89e9aec458ffc3028 185 Pfam PF02325 YGGT family 10 77 1.1E-19 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 VIBNI_A0053 71fb05cba87122e89e9aec458ffc3028 185 Pfam PF02325 YGGT family 109 173 8.9E-20 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 VIBNI_A1398 870c8b3c4ae973571fd266b7307f4721 262 Gene3D G3DSA:1.10.357.10 26 214 6.5E-18 T 15-10-2018 VIBNI_A1398 870c8b3c4ae973571fd266b7307f4721 262 SUPERFAMILY SSF46689 24 87 3.33E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VIBNI_A1398 870c8b3c4ae973571fd266b7307f4721 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1398 870c8b3c4ae973571fd266b7307f4721 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.2E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_A1398 870c8b3c4ae973571fd266b7307f4721 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 81 9.7E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VIBNI_B1304 141546f2d2d1f201a71c547ed48d105f 601 SUPERFAMILY SSF53474 225 522 8.82E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B1304 141546f2d2d1f201a71c547ed48d105f 601 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 8.2E-74 T 15-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VIBNI_B1304 141546f2d2d1f201a71c547ed48d105f 601 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 2.7E-249 T 15-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VIBNI_B1304 141546f2d2d1f201a71c547ed48d105f 601 Gene3D G3DSA:3.40.50.1820 227 515 7.3E-9 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold VIBNI_B0332 c569cf120d5eeec4980d40a2be9ae26d 328 Pfam PF13503 Domain of unknown function (DUF4123) 28 155 1.3E-19 T 15-10-2018 IPR025391 Domain of unknown function DUF4123 VIBNI_A3791 2476e1b42b7da8c9fe9869e87b0898c1 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 416 1.8E-111 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VIBNI_A3791 2476e1b42b7da8c9fe9869e87b0898c1 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 422 9.4E-127 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A3791 2476e1b42b7da8c9fe9869e87b0898c1 429 PIRSF PIRSF006066 1 428 4.1E-144 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VIBNI_A2516 877747ac232ba74670f55e52623be3eb 257 PIRSF PIRSF029037 1 257 2.5E-108 T 15-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VIBNI_A2516 877747ac232ba74670f55e52623be3eb 257 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 255 3.6E-111 T 15-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VIBNI_A0727 03a05a37c8131ee9932d9200803ca5d5 147 Pfam PF02050 Flagellar FliJ protein 18 140 3.8E-27 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VIBNI_A0727 03a05a37c8131ee9932d9200803ca5d5 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.8E-30 T 15-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VIBNI_A0156 127343dc78e378534ea0d07fb1a2aa1c 145 Pfam PF09335 SNARE associated Golgi protein 46 140 1.6E-11 T 15-10-2018 IPR032816 SNARE associated Golgi protein VIBNI_A3662 952edf84696ecf6888da652c14153c22 404 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 328 403 2.1E-10 T 15-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VIBNI_B0036 66cffc081f12c63f5ecb6901c5aeb0f0 374 Pfam PF08308 PEGA domain 305 369 4.3E-23 T 15-10-2018 IPR013229 PEGA VIBNI_A3789 5bdc9c6f3d7732e1aa5835c8fab9087c 326 SUPERFAMILY SSF51197 6 320 9.62E-71 T 15-10-2018 VIBNI_A3789 5bdc9c6f3d7732e1aa5835c8fab9087c 326 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 42 320 5.4E-29 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VIBNI_A3789 5bdc9c6f3d7732e1aa5835c8fab9087c 326 Gene3D G3DSA:3.60.130.10 2 323 8.1E-102 T 15-10-2018 VIBNI_A3063 7a42596017049fb2dc4ceebf01b4214e 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 919 1253 9.4E-62 T 15-10-2018 IPR007452 Translocation and assembly module TamB VIBNI_B1388 622ee0df5d382443ec0765bec02351ca 568 Gene3D G3DSA:3.40.640.10 123 447 2.0E-56 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VIBNI_B1388 622ee0df5d382443ec0765bec02351ca 568 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 104 468 1.3E-26 T 15-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VIBNI_B1388 622ee0df5d382443ec0765bec02351ca 568 SUPERFAMILY SSF53383 92 562 1.7E-65 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VIBNI_B0829 6177b9705e37bbd85d3dd0c2e08ef1d0 116 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 103 1.7E-6 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VIBNI_B0771 cfa39dc92c8345c64ae5859e57c26d53 280 Pfam PF02361 Cobalt transport protein 17 237 2.6E-29 T 15-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VIBNI_A1732 e4768a49a57abf7834b6ba8f08176fe4 271 SMART SM00047 104 251 0.0053 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VIBNI_A1732 e4768a49a57abf7834b6ba8f08176fe4 271 Gene3D G3DSA:1.10.530.10 119 264 5.3E-16 T 15-10-2018 VIBNI_A1732 e4768a49a57abf7834b6ba8f08176fe4 271 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 262 2.0E-17 T 15-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VIBNI_B0493 a5338e15a2d3b23c7a1bfd523414d47a 68 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 57 4.5E-22 T 15-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system VIBNI_A2262 dcbe70c273892148faf7a1a35c843001 102 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 21 98 7.7E-27 T 15-10-2018 IPR011846 Cyd operon protein YbgE VIBNI_A2262 dcbe70c273892148faf7a1a35c843001 102 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 9 100 3.0E-32 T 15-10-2018 IPR011846 Cyd operon protein YbgE VIBNI_B1556 d5636904f2ec8fe9eccdafb31c3bbf47 335 Pfam PF01061 ABC-2 type transporter 127 298 5.8E-23 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VIBNI_A2437 b58d2c58f909601b436f9c1c6cdbb106 207 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 181 1.4E-27 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B2136 baaa9d9ef930ad54cdad038d15f6e473 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 2.8E-39 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2244 6362ac6f6b1b4b589167ccf2031967f1 1118 SUPERFAMILY SSF52540 38 228 2.62E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VIBNI_B1329 9ed6d285e261383c61596c27a5254328 243 Pfam PF06629 MltA-interacting protein MipA 28 238 9.1E-38 T 15-10-2018 IPR010583 MltA-interacting MipA VIBNI_A0396 08d9d244f7be7428bbf048e8bc9674aa 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 133 4.6E-31 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VIBNI_A0396 08d9d244f7be7428bbf048e8bc9674aa 135 Gene3D G3DSA:3.30.420.270 60 129 2.1E-12 T 15-10-2018 VIBNI_A1076 a58bf137a105c6492d09d188c7a3fff2 174 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 1.1E-45 T 15-10-2018 IPR018639 Domain of unknown function DUF2062 VIBNI_B0083 47be33394b6ecbba3d2a0e07c2827110 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 308 2.0E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B0083 47be33394b6ecbba3d2a0e07c2827110 317 SUPERFAMILY SSF161098 64 304 1.07E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B0083 47be33394b6ecbba3d2a0e07c2827110 317 Gene3D G3DSA:1.10.3720.10 60 313 1.4E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B2057 6762e5b8d395565806bf12eba5c8efc7 134 Pfam PF08818 Domain of unknown function (DU1801) 17 118 1.3E-10 T 15-10-2018 IPR014922 Domain of unknown function DUF1801 VIBNI_B2057 6762e5b8d395565806bf12eba5c8efc7 134 SUPERFAMILY SSF159888 5 125 3.14E-13 T 15-10-2018 VIBNI_A0776 2274c320373fc93f4dc184a4edb552d8 176 Pfam PF04315 Elongation factor P hydroxylase 11 173 3.2E-71 T 15-10-2018 IPR007411 Elongation factor P hydroxylase VIBNI_A1217 4f5c85e0007acaa601845517f3398f47 323 Gene3D G3DSA:3.40.50.12780 8 181 9.4E-6 T 15-10-2018 VIBNI_A1217 4f5c85e0007acaa601845517f3398f47 323 SUPERFAMILY SSF56801 24 129 1.96E-6 T 15-10-2018 VIBNI_A0662 ddacd45d9474b97e5e781f309eb5447a 167 PIRSF PIRSF006162 6 165 2.3E-54 T 15-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VIBNI_A0662 ddacd45d9474b97e5e781f309eb5447a 167 SUPERFAMILY SSF101307 9 160 5.23E-49 T 15-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VIBNI_A0662 ddacd45d9474b97e5e781f309eb5447a 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.8E-53 T 15-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VIBNI_B0751 e4c1cdad81e0b89f279c094e7e50a187 249 Pfam PF03746 LamB/YcsF family 2 236 4.7E-91 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VIBNI_B0751 e4c1cdad81e0b89f279c094e7e50a187 249 Gene3D G3DSA:3.20.20.370 1 244 1.3E-93 T 15-10-2018 VIBNI_B0751 e4c1cdad81e0b89f279c094e7e50a187 249 SUPERFAMILY SSF88713 2 237 1.28E-80 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VIBNI_A3427 4f67e4c96ea37a0d8e1c30444b8be4bb 306 Pfam PF00482 Type II secretion system (T2SS), protein F 166 294 4.2E-15 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_B0400 2cfd0325c296795e6b1c5807a52949dc 209 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 70 198 3.3E-23 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A2740 54d50452d54b3afef8ea2b32babb3963 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 149 1.2E-24 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B1637 2fabda3bdace7ca2a35f4e8df54172ac 306 Pfam PF01882 Protein of unknown function DUF58 51 135 1.0E-21 T 15-10-2018 IPR002881 Domain of unknown function DUF58 VIBNI_B1637 2fabda3bdace7ca2a35f4e8df54172ac 306 SUPERFAMILY SSF53300 87 224 1.2E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VIBNI_B2166 91aef90f2de7a490db89a6d2586ed4da 269 Pfam PF01226 Formate/nitrite transporter 9 257 6.9E-63 T 15-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VIBNI_B2166 91aef90f2de7a490db89a6d2586ed4da 269 Gene3D G3DSA:1.20.1080.10 1 250 8.3E-65 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VIBNI_B0681 8ca3c9849283ef17fbe887a7ace521d7 263 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 226 2.2E-27 T 15-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VIBNI_B0681 8ca3c9849283ef17fbe887a7ace521d7 263 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 115 225 2.8E-13 T 15-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VIBNI_B0866 3523c0f5033d4124c571ae7fd8a992ed 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 61 193 1.0E-17 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A1767 aa690b039008f3ab71853eeca728523e 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 169 2.6E-21 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A1918 32639ce585a361a299b85ab602c69ca1 290 Pfam PF00482 Type II secretion system (T2SS), protein F 152 278 1.4E-14 T 15-10-2018 IPR018076 Type II secretion system F domain VIBNI_B1734 a809451ee3461a966a2de4b61346bb8f 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 316 9.3E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VIBNI_B1734 a809451ee3461a966a2de4b61346bb8f 328 Gene3D G3DSA:1.10.3720.10 67 323 2.5E-61 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_B1734 a809451ee3461a966a2de4b61346bb8f 328 SUPERFAMILY SSF161098 72 312 9.42E-52 T 15-10-2018 IPR035906 MetI-like superfamily VIBNI_A1776 550ceec7abe50c6e8f24147c36bf4958 103 Pfam PF12321 Protein of unknown function (DUF3634) 3 101 3.5E-37 T 15-10-2018 IPR022090 Protein of unknown function DUF3634 VIBNI_A3732 a244f9eb7172c0d60977c619d2d574c7 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 3.2E-20 T 15-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VIBNI_A0163 519f931f398c413e3bf948bfc22d4841 264 Pfam PF01578 Cytochrome C assembly protein 38 262 3.0E-45 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VIBNI_A2306 af9baebdc51908045bb49f87984bbe20 169 Pfam PF11086 Protein of unknown function (DUF2878) 10 154 3.7E-30 T 15-10-2018 IPR021306 Protein of unknown function DUF2878 VIBNI_A1657 ca4cfd003f4a3eff5b4a67ec1ceca4ec 456 PIRSF PIRSF006603 5 452 1.1E-61 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1657 ca4cfd003f4a3eff5b4a67ec1ceca4ec 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 4.2E-114 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1657 ca4cfd003f4a3eff5b4a67ec1ceca4ec 456 Pfam PF01554 MatE 17 176 2.4E-32 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_A1657 ca4cfd003f4a3eff5b4a67ec1ceca4ec 456 Pfam PF01554 MatE 243 404 3.4E-36 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VIBNI_B0111 db3f3a289b50e94b4d139dd39da0cadf 392 Pfam PF05940 NnrS protein 11 386 1.4E-71 T 15-10-2018 IPR010266 NnrS VIBNI_B1638 3293711fe563ca8a07716a738a8eaa6e 156 Pfam PF14316 Domain of unknown function (DUF4381) 9 141 6.5E-37 T 15-10-2018 IPR025489 Protein of unknown function (DUF4381 VIBNI_A1417 7b79ee46c440487902eddedfe3729483 120 Pfam PF03788 LrgA family 20 110 1.5E-25 T 15-10-2018 IPR005538 LrgA/CidA family GO:0016021 VIBNI_B1392 e2e698e1be2c71c9fbdd44afd90a119f 249 Pfam PF11249 Protein of unknown function (DUF3047) 61 244 2.6E-59 T 15-10-2018 IPR021409 Protein of unknown function DUF3047 VIBNI_B1548 cf8764438b45672d7d36f35b3af480f0 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 1.2E-30 T 15-10-2018 IPR010699 Protein of unknown function DUF1275 VIBNI_A2122 323f59e6d8d912efe156fdde2b7fae73 82 Gene3D G3DSA:1.10.1900.30 9 76 5.4E-32 T 15-10-2018 IPR038191 YciN superfamily VIBNI_A2122 323f59e6d8d912efe156fdde2b7fae73 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 1.1E-38 T 15-10-2018 IPR019633 Protein of unknown function DUF2498 VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 SUPERFAMILY SSF89963 2 84 9.81E-31 T 15-10-2018 IPR036183 YajQ-like superfamily VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 30.051 T 15-10-2018 IPR007551 Protein of unknown function DUF520 VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 Gene3D G3DSA:3.30.70.860 95 160 4.5E-30 T 15-10-2018 IPR035571 UPF0234-like, C-terminal VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 SUPERFAMILY SSF89963 88 160 4.18E-29 T 15-10-2018 IPR036183 YajQ-like superfamily VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 2.6E-65 T 15-10-2018 IPR007551 Protein of unknown function DUF520 VIBNI_A1803 6fb66318b38a73e6a059f87e9172bf3f 160 Gene3D G3DSA:3.30.70.990 9 94 9.2E-29 T 15-10-2018 IPR035570 UPF0234, N-terminal VIBNI_B0113 fe78a30d5fcabc3ae89ba31d96dc79cc 74 Pfam PF11686 Protein of unknown function (DUF3283) 9 69 1.3E-31 T 15-10-2018 IPR021700 Protein of unknown function DUF3283 VIBNI_A2589 dc3da2121861bb0793da071098e31b06 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 325 8.7E-29 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1074 ff5f8900a6d595619bf1e31cf4544a88 119 Pfam PF11225 Protein of unknown function (DUF3024) 58 118 6.3E-19 T 15-10-2018 IPR021388 Bacteriophage 933W, L0084 VIBNI_B1909 5a34e7c5fe271fa412e6aaac4b430534 140 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 3 138 1.9E-14 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 VIBNI_A0940 9c64a08d909b2d8728d3af95e94ffbdb 146 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 37 140 2.4E-37 T 15-10-2018 IPR039366 YscW/ExsB VIBNI_A2726 2f71a592b70d48b3d1bef33fd5afd794 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 5.0E-31 T 15-10-2018 IPR003740 Uncharacterised membrane protein YitT VIBNI_A1763 509fccc1a5af7d0f9c8254d68fabc51e 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 331 4.5E-42 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A0844 f56c16403aa8f56464c979700273a9e0 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 85 2.8E-31 T 15-10-2018 IPR009749 Protein of unknown function DUF1315 VIBNI_B1330 dd1c905ea0daa6855e68fdaa9c9177dd 224 Gene3D G3DSA:2.160.20.120 27 205 1.1E-7 T 15-10-2018 VIBNI_A1965 7027f3f4d05e50e36d4de9a92d83cc4b 142 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 24 128 1.2E-20 T 15-10-2018 IPR018673 Protein of unknown function DUF2141 VIBNI_B0716 9f0b44b95cbc6edf480dd1de481e0d67 231 Gene3D G3DSA:3.40.225.10 1 229 3.6E-56 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_B0716 9f0b44b95cbc6edf480dd1de481e0d67 231 SUPERFAMILY SSF53639 1 220 7.85E-66 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VIBNI_B0716 9f0b44b95cbc6edf480dd1de481e0d67 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 197 1.4E-42 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_B0716 9f0b44b95cbc6edf480dd1de481e0d67 231 SMART SM01007 7 197 1.7E-64 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal VIBNI_B1068 261eb0cb45aab3ef895d6cffd3ae60dd 347 Pfam PF14486 Domain of unknown function (DUF4432) 38 343 1.8E-59 T 15-10-2018 IPR027839 Protein of unknown function DUF4432 VIBNI_B1068 261eb0cb45aab3ef895d6cffd3ae60dd 347 Gene3D G3DSA:2.70.98.80 3 346 1.0E-80 T 15-10-2018 VIBNI_A3241 a56aad9dfae2a23a2e074f9a5a4c3fa4 226 Gene3D G3DSA:3.40.109.10 8 224 5.4E-51 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A3241 a56aad9dfae2a23a2e074f9a5a4c3fa4 226 Pfam PF00881 Nitroreductase family 32 201 8.0E-24 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VIBNI_A3241 a56aad9dfae2a23a2e074f9a5a4c3fa4 226 SUPERFAMILY SSF55469 19 225 5.63E-42 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VIBNI_A2298 6122aeeb217a376f83586aafcb1bea87 214 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 209 2.4E-37 T 15-10-2018 IPR018635 Uncharacterised protein family UPF0319 VIBNI_B0512 bfb9419197f4eeb74677f0dcf34a8b81 115 Pfam PF07978 NIPSNAP 6 101 1.0E-23 T 15-10-2018 IPR012577 NIPSNAP VIBNI_B0512 bfb9419197f4eeb74677f0dcf34a8b81 115 SUPERFAMILY SSF54909 2 101 6.26E-20 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_B1396 8c6c58e64c61ba6528a2f89708c6c7b8 158 Pfam PF10517 Electron transfer DM13 62 157 1.6E-19 T 15-10-2018 IPR019545 DM13 domain VIBNI_B0843 2ea69c22f526e00c6f68a6363b461f7e 494 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 2.4E-127 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VIBNI_B2104 c9e035ab833cb3ce8d9392c420e9af2a 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 324 9.0E-39 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A1742 bd0a571fc1c23af9ecf21c2c0d6d6314 159 Pfam PF05751 FixH 7 147 7.0E-40 T 15-10-2018 IPR008620 Nitrogen fixation protein FixH VIBNI_B2135 edafac4ea0db83e2eb6839007ec8a05f 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 67 336 4.0E-29 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1108 398da5584ae7ff058a1f084c63b66f34 59 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.1E-20 T 15-10-2018 IPR021677 Protein of unknown function DUF2986 VIBNI_B1288 ba09d5748fad6dda0c2a54bc50ec08fe 240 Pfam PF03591 AzlC protein 29 167 4.0E-35 T 15-10-2018 IPR011606 Branched-chain amino acid transport, permease VIBNI_B0841 7be4a3ddb6563bd463835027543dd9af 295 Pfam PF00892 EamA-like transporter family 151 280 3.7E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0841 7be4a3ddb6563bd463835027543dd9af 295 Pfam PF00892 EamA-like transporter family 6 135 1.9E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VIBNI_B0841 7be4a3ddb6563bd463835027543dd9af 295 SUPERFAMILY SSF103481 188 285 1.31E-10 T 15-10-2018 VIBNI_B0841 7be4a3ddb6563bd463835027543dd9af 295 SUPERFAMILY SSF103481 35 137 2.35E-13 T 15-10-2018 VIBNI_A1061 33580bd1beb1e05b27c96fa9216201aa 469 SUPERFAMILY SSF48452 39 262 2.28E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VIBNI_B0181 48596736a747a17aeef7ef814cf5f194 250 Pfam PF01925 Sulfite exporter TauE/SafE 6 240 7.0E-24 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VIBNI_A0497 a7d48b7dc1b88867c79da20e9a680e01 205 Pfam PF10144 Bacterial virulence factor haemolysin 6 150 1.7E-38 T 15-10-2018 IPR019305 Uncharacterised protein family Smp VIBNI_A1175 f8abf3190c18bb6fe7d802566277d2a3 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 9.2E-99 T 15-10-2018 IPR021974 Protein of unknown function DUF3581 VIBNI_A1611 f0e87112f4c2b40e9ab7cb58e0a45306 234 Pfam PF06992 Replication protein P 1 224 3.6E-18 T 15-10-2018 IPR009731 Replication P GO:0006270 VIBNI_B0828 7ecd514ee4716fafedcc4c8180fb0565 622 Pfam PF13387 Domain of unknown function (DUF4105) 121 294 1.2E-47 T 15-10-2018 IPR025178 Domain of unknown function DUF4105 VIBNI_A2512 36bb1b01e9c5b7f2e39c0aca82c8c997 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 3.9E-27 T 15-10-2018 IPR021732 Protein of unknown function DUF3301 VIBNI_A0702 21c97a4d0bce55ac4c90b16e3316e046 150 Pfam PF11143 Protein of unknown function (DUF2919) 3 146 7.1E-51 T 15-10-2018 IPR021318 Protein of unknown function DUF2919 VIBNI_A1203 42366ecce565cdb235dc0d071d251ba0 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 150 3.0E-25 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B0836 8ec11f90605003d037919a58f0a620e8 104 SUPERFAMILY SSF54909 4 70 2.35E-9 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel VIBNI_A2662 cdcfbeafa8745af76100cbe48aae7a29 290 Pfam PF01963 TraB family 27 281 4.6E-50 T 15-10-2018 IPR002816 Pheromone shutdown, TraB VIBNI_A3108 a96d4f64fa0078f604650905b4986de1 66 Pfam PF11747 Killing trait 13 61 3.4E-7 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_A0445 29e91a929f5c74ee0dff9c727c8b29ea 193 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 45 180 1.1E-20 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_A2242 f9b0a9f3a3438b8c08153c435cac044f 777 Pfam PF03235 Protein of unknown function DUF262 19 347 4.4E-32 T 15-10-2018 IPR004919 Domain of unknown function DUF262 VIBNI_A1888 f21cb945ddb3b71849b8a1e68121441f 438 SUPERFAMILY SSF56059 25 422 1.6E-22 T 15-10-2018 VIBNI_A3623 4bba53a7e4620d139e11c86a62ce4f4f 195 Pfam PF11140 Protein of unknown function (DUF2913) 4 184 1.3E-24 T 15-10-2018 IPR021316 Protein of unknown function DUF2913 VIBNI_B1910 d99ca5e5ee9cafb27515e5860ddb0bda 499 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 436 2.1E-146 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VIBNI_A1328 a1d923dc5c6ba1eba684d9435d21dcab 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 3 55 6.9E-25 T 15-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VIBNI_A1328 a1d923dc5c6ba1eba684d9435d21dcab 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 2.8E-27 T 15-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VIBNI_A1408 6f770b3777f64f1d9bb9bf388dae3cf0 391 SUPERFAMILY SSF56935 26 391 2.66E-7 T 15-10-2018 VIBNI_A1766 8198ebff03cbaca358c4f2bbf0eb8f8b 340 Gene3D G3DSA:3.40.190.170 28 340 3.0E-105 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VIBNI_A1766 8198ebff03cbaca358c4f2bbf0eb8f8b 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 318 6.1E-48 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VIBNI_B0205 0582042f17fa3871571bbfcb87e55cd6 529 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 39 515 2.8E-141 T 15-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VIBNI_A3106 1d028a8a5e3b64e0cb4b93bd0e810718 88 Pfam PF11747 Killing trait 9 74 4.2E-29 T 15-10-2018 IPR021070 Killing trait, RebB VIBNI_B1649 49bb95f60d4eab9a4798a2d14773a2d7 360 Pfam PF02628 Cytochrome oxidase assembly protein 6 339 1.1E-79 T 15-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VIBNI_A0763 8259e65674320811f15bf6acedd7096f 238 Pfam PF11859 Protein of unknown function (DUF3379) 1 232 1.2E-80 T 15-10-2018 IPR021806 Protein of unknown function DUF3379 VIBNI_B0426 31f613ad2bac917971bf3be364d6bc37 68 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 6.9E-33 T 15-10-2018 IPR021948 Protein of unknown function DUF3565 VIBNI_B0708 b65e3334157e07d788799c90318e05e0 173 SUPERFAMILY SSF48371 41 159 5.25E-5 T 15-10-2018 IPR016024 Armadillo-type fold VIBNI_A1219 e13a8d6c616df3d167cee2b753219a07 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 277 5.5E-24 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A3688 7d7f87f30db15578d9ba61ed8d5bdb49 411 Pfam PF04932 O-Antigen ligase 186 339 4.2E-8 T 15-10-2018 IPR007016 O-antigen ligase-related VIBNI_A1974 ed359da8da27f7e5ca57933fe1d47f6f 159 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.2E-69 T 15-10-2018 IPR021334 Protein of unknown function DUF2947 VIBNI_A0296 05f502b33cf5245b1d7c81b09722ca05 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 59 6.5E-26 T 15-10-2018 IPR021932 Protein of unknown function DUF3545 VIBNI_A1040 4915486174f97827200d267e20b95fb6 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 343 2.1E-39 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_A2058 12c1a40b2d187a71d799b0272b8c95c1 296 Pfam PF13084 Domain of unknown function (DUF3943) 133 242 3.9E-36 T 15-10-2018 IPR025079 Domain of unknown function DUF3943 VIBNI_B1552 eaf559a9f180263cdac587d3114e78c5 315 Pfam PF03547 Membrane transport protein 163 304 1.3E-14 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VIBNI_B1552 eaf559a9f180263cdac587d3114e78c5 315 Pfam PF03547 Membrane transport protein 14 162 1.2E-6 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VIBNI_A2332 a2b7e0a07c8f3290f4a6fc456927c0be 90 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 90 17.432 T 15-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VIBNI_A2332 a2b7e0a07c8f3290f4a6fc456927c0be 90 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 80 8.8E-16 T 15-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VIBNI_A1474 a01f149cce618991433120e35fe56aff 214 Pfam PF02397 Bacterial sugar transferase 16 209 9.2E-61 T 15-10-2018 IPR003362 Bacterial sugar transferase VIBNI_B0607 25fb61c00a5d9b0db47a6cfc7fe37b37 149 Pfam PF11911 Protein of unknown function (DUF3429) 8 147 2.5E-27 T 15-10-2018 IPR021836 Protein of unknown function DUF3429 VIBNI_A3145 047743b1988404b8ff46bd3ecbb174bd 250 Pfam PF05742 Transport and Golgi organisation 2 12 124 2.9E-9 T 15-10-2018 IPR008551 Transport and Golgi organisation protein 2 VIBNI_A1572 cdc9a2be114cadfc9a430ca472c05c36 293 Pfam PF03547 Membrane transport protein 147 284 4.0E-10 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VIBNI_A1836 625f643fda3ad916605eab66a60d4faa 511 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 3.1E-139 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VIBNI_A1851 4ce708b746b461791849bd91956b15be 381 Pfam PF12698 ABC-2 family transporter protein 18 368 1.8E-40 T 15-10-2018 VIBNI_A1458 446dd181cac2fb3d0b14816e3ec3fbc5 173 Pfam PF08592 Domain of unknown function (DUF1772) 18 148 1.1E-12 T 15-10-2018 VIBNI_B1349 99bae1aba25601a9e85a05c601eaa206 394 Pfam PF05940 NnrS protein 15 388 1.0E-111 T 15-10-2018 IPR010266 NnrS VIBNI_A0635 b2a371861b911889094ff8ef333da308 519 Pfam PF03806 AbgT putative transporter family 19 517 3.0E-215 T 15-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VIBNI_A3214 73cb411e29481e52587a2e15d52d27a3 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.4E-23 T 15-10-2018 IPR019201 Protein of unknown function DUF2065 VIBNI_A2124 5c7ccf76ff6134b8ea6b88377d37b3da 151 Pfam PF05433 Glycine zipper 2TM domain 56 92 9.7E-9 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VIBNI_B1364 96cf8bffc0abd2e2cb7ba39d86c1f326 476 Pfam PF03600 Citrate transporter 47 421 4.4E-54 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VIBNI_A2476 0fa55f263c955937e3a39806dd427c93 418 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 25 401 2.8E-137 T 15-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VIBNI_A1423 1567db15fe8a0d051cecd4ff1e2148b4 711 SUPERFAMILY SSF46626 404 594 2.66E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VIBNI_A3127 29b764385bf41c593f77e2ad9e3091cc 99 Pfam PF10795 Protein of unknown function (DUF2607) 7 90 9.6E-17 T 15-10-2018 IPR019731 Protein of unknown function DUF2607 VIBNI_A0310 45a63c228d668ab50b5f1c1da4f301ec 174 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 155 8.4E-23 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B1333 05015a60886d6d2efca8ec88a3a54992 206 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 200 7.1E-32 T 15-10-2018 IPR018635 Uncharacterised protein family UPF0319 VIBNI_A0470 a9fd896644e599ba1298a1f231246c32 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 320 2.3E-55 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VIBNI_B1985 7dfa74c71ce23957ae7933e17bc393a2 491 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 436 2.0E-118 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VIBNI_A1481 2bcce94d3b5928a8cf9b96e26db96697 373 SUPERFAMILY SSF53756 23 361 3.92E-5 T 15-10-2018 VIBNI_B0466 35365891378b51541e27495e5fd89d47 382 Pfam PF06224 Winged helix DNA-binding domain 36 368 2.9E-81 T 15-10-2018 IPR009351 Protein of unknown function DUF1006 VIBNI_A1603 80f7ea231f1478339e912240d9b4515c 320 Pfam PF03837 RecT family 45 225 1.2E-32 T 15-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 VIBNI_A0274 00ccb3aa3ed508da6688437094e3a6d4 326 Gene3D G3DSA:2.60.40.10 29 128 4.2E-20 T 15-10-2018 IPR013783 Immunoglobulin-like fold VIBNI_A2610 34b698fbdfef447941edfdc0371b417e 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 1.7E-70 T 15-10-2018 IPR011435 Protein of unknown function DUF1538 VIBNI_A1666 fbf703791edbeff47c8c12bcd9995b4c 262 Pfam PF04116 Fatty acid hydroxylase superfamily 88 224 3.4E-28 T 15-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VIBNI_B2065 49e93f837427384bd7e596699f788923 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 154 6.7E-29 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VIBNI_B1335 03397cbc1954c753e3b709efc47cd59c 354 Pfam PF01757 Acyltransferase family 6 322 2.0E-26 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VIBNI_B1779 b81bd7b7e67a0c43d17fda5b7ac06d0d 238 Pfam PF03640 Secreted repeat of unknown function 24 64 5.8E-10 T 15-10-2018 IPR005297 Lipoprotein repeat VIBNI_B1779 b81bd7b7e67a0c43d17fda5b7ac06d0d 238 Pfam PF03640 Secreted repeat of unknown function 195 237 4.0E-14 T 15-10-2018 IPR005297 Lipoprotein repeat VIBNI_B1779 b81bd7b7e67a0c43d17fda5b7ac06d0d 238 Pfam PF03640 Secreted repeat of unknown function 81 123 1.4E-16 T 15-10-2018 IPR005297 Lipoprotein repeat VIBNI_B1779 b81bd7b7e67a0c43d17fda5b7ac06d0d 238 Pfam PF03640 Secreted repeat of unknown function 141 173 6.3E-9 T 15-10-2018 IPR005297 Lipoprotein repeat VIBNI_A0140 2873b15045fcdc37346f5eb5d63c1f73 205 Pfam PF07290 Protein of unknown function (DUF1449) 64 202 8.0E-6 T 15-10-2018 IPR010840 Protein of unknown function DUF1449 VIBNI_A3054 20710a5124e9cce21d090c5ac9ac317b 132 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 15 130 1.6E-33 T 15-10-2018 IPR019231 Protein of unknown function DUF2170 VIBNI_B0145 2ce1abed424b6893d2338f0f3cbc73f3 753 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 385 708 7.4E-145 T 15-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 VIBNI_A0549 909b42a3d9f3f4a439d594b9900dc8aa 145 Pfam PF11012 Protein of unknown function (DUF2850) 55 131 2.4E-23 T 15-10-2018 IPR021271 Protein of unknown function DUF2850 VIBNI_A3741 a44f646640d775fbf5afb89f3d5c36b2 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 8.6E-19 T 15-10-2018 IPR009525 Protein of unknown function DUF1145 VIBNI_B0596 99da753745aee72368fe08fd58774fb2 189 Pfam PF04955 HupE / UreJ protein 10 175 1.3E-20 T 15-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein VIBNI_A1331 84dd708209eb7bdd17a76cba2f45bcfc 60 Pfam PF07023 Protein of unknown function (DUF1315) 10 54 6.2E-8 T 15-10-2018 IPR009749 Protein of unknown function DUF1315 VIBNI_A1634 b35dba97ce332e344874469172900fec 64 Pfam PF16080 Bacteriophage holin family HP1 5 56 1.7E-13 T 15-10-2018 IPR032118 Bacteriophage holin HP1 family VIBNI_A1810 9b550819edfc9352a6c0395bec09fe83 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 5.1E-39 T 15-10-2018 IPR006214 Bax inhibitor 1-related