locus-tag class description D0812_00010 PF11638 DnaA N-terminal domain D0812_00010 PF08299 Bacterial dnaA protein helix-turn-helix D0812_00010 PF00308 Bacterial dnaA protein D0812_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain D0812_00015 PF02767 DNA polymerase III beta subunit, central domain D0812_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain D0812_00020 PF02463 RecF/RecN/SMC N terminal domain D0812_00025 PF01751 Toprim domain D0812_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_00025 PF18053 DNA gyrase B subunit insert domain D0812_00025 PF00986 DNA gyrase B subunit, carboxyl terminus D0812_00025 PF00204 DNA gyrase B D0812_00030 PF00011 Hsp20/alpha crystallin family D0812_00035 PF00155 Aminotransferase class I and II D0812_00055 PF00263 Bacterial type II and III secretion system protein D0812_00055 PF04972 BON domain D0812_00055 PF13629 Pilus formation protein N terminal region D0812_00070 PF00437 Type II/IV secretion system protein D0812_00105 PF00691 OmpA family D0812_00105 PF01389 OmpA-like transmembrane domain D0812_00110 PF00512 His Kinase A (phospho-acceptor) domain D0812_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_00110 PF00672 HAMP domain D0812_00115 PF00486 Transcriptional regulatory protein, C terminal D0812_00115 PF00072 Response regulator receiver domain D0812_00120 PF00128 Alpha amylase, catalytic domain D0812_00125 PF02092 Glycyl-tRNA synthetase beta subunit D0812_00125 PF05746 DALR anticodon binding domain D0812_00130 PF02091 Glycyl-tRNA synthetase alpha subunit D0812_00135 PF01169 Uncharacterized protein family UPF0016 D0812_00145 PF01206 Sulfurtransferase TusA D0812_00155 PF03466 LysR substrate binding domain D0812_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_00160 PF00107 Zinc-binding dehydrogenase D0812_00160 PF08240 Alcohol dehydrogenase GroES-like domain D0812_00165 PF02803 Thiolase, C-terminal domain D0812_00165 PF00108 Thiolase, N-terminal domain D0812_00170 PF00378 Enoyl-CoA hydratase/isomerase D0812_00170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0812_00170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0812_00175 PF01205 Uncharacterized protein family UPF0029 D0812_00175 PF09186 Domain of unknown function (DUF1949) D0812_00180 PF02386 Cation transport protein D0812_00185 PF12724 Flavodoxin domain D0812_00225 PF07732 Multicopper oxidase D0812_00225 PF07731 Multicopper oxidase D0812_00225 PF00394 Multicopper oxidase D0812_00230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0812_00235 PF01964 Radical SAM ThiC family D0812_00235 PF13667 ThiC-associated domain D0812_00240 PF02581 Thiamine monophosphate synthase D0812_00245 PF00899 ThiF family D0812_00250 PF02597 ThiS family D0812_00255 PF05690 Thiazole biosynthesis protein ThiG D0812_00260 PF04055 Radical SAM superfamily D0812_00260 PF06968 Biotin and Thiamin Synthesis associated domain D0812_00265 PF00557 Metallopeptidase family M24 D0812_00265 PF01321 Creatinase/Prolidase N-terminal domain D0812_00265 PF00557 Metallopeptidase family M24 D0812_00265 PF01321 Creatinase/Prolidase N-terminal domain D0812_00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_00270 PF03466 LysR substrate binding domain D0812_00275 PF07690 Major Facilitator Superfamily D0812_00295 PF05114 Protein of unknown function (DUF692) D0812_00305 PF13361 UvrD-like helicase C-terminal domain D0812_00305 PF00580 UvrD/REP helicase N-terminal domain D0812_00320 PF01810 LysE type translocator D0812_00330 PF00892 EamA-like transporter family D0812_00335 PF00270 DEAD/DEAH box helicase D0812_00335 PF00271 Helicase conserved C-terminal domain D0812_00335 PF00570 HRDC domain D0812_00335 PF16124 RecQ zinc-binding D0812_00335 PF09382 RQC domain D0812_00350 PF02592 Putative vitamin uptake transporter D0812_00360 PF02541 Ppx/GppA phosphatase family D0812_00365 PF00271 Helicase conserved C-terminal domain D0812_00365 PF00270 DEAD/DEAH box helicase D0812_00370 PF00085 Thioredoxin D0812_00375 PF07498 Rho termination factor, N-terminal domain D0812_00375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_00375 PF07497 Rho termination factor, RNA-binding domain D0812_00385 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0812_00390 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_00395 PF00175 Oxidoreductase NAD-binding domain D0812_00440 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0812_00445 PF02602 Uroporphyrinogen-III synthase HemD D0812_00450 PF03900 Porphobilinogen deaminase, C-terminal domain D0812_00450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0812_00455 PF12633 Adenylate cyclase NT domain D0812_00455 PF01295 Adenylate cyclase, class-I D0812_00460 PF01491 Frataxin-like domain D0812_00470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0812_00470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0812_00475 PF01678 Diaminopimelate epimerase D0812_00485 PF00589 Phage integrase family D0812_00485 PF02899 Phage integrase, N-terminal SAM-like domain D0812_00490 PF13419 Haloacid dehalogenase-like hydrolase D0812_00495 PF08495 FIST N domain D0812_00495 PF10442 FIST C domain D0812_00495 PF00990 Diguanylate cyclase, GGDEF domain D0812_00495 PF00563 EAL domain D0812_00520 PF12146 Serine aminopeptidase, S33 D0812_00525 PF01810 LysE type translocator D0812_00530 PF00563 EAL domain D0812_00530 PF08668 HDOD domain D0812_00535 PF01022 Bacterial regulatory protein, arsR family D0812_00540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0812_00540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0812_00565 PF10694 Protein of unknown function (DUF2500) D0812_00595 PF01914 MarC family integral membrane protein D0812_00610 PF02881 SRP54-type protein, helical bundle domain D0812_00610 PF00448 SRP54-type protein, GTPase domain D0812_00610 PF02881 SRP54-type protein, helical bundle domain D0812_00610 PF00448 SRP54-type protein, GTPase domain D0812_00615 PF00005 ABC transporter D0812_00620 PF18075 FtsX extracellular domain D0812_00625 PF04545 Sigma-70, region 4 D0812_00625 PF04542 Sigma-70 region 2 D0812_00625 PF00140 Sigma-70 factor, region 1.2 D0812_00630 PF00581 Rhodanese-like domain D0812_00635 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0812_00635 PF01694 Rhomboid family D0812_00640 PF03748 Flagellar basal body-associated protein FliL D0812_00645 PF04345 Chorismate lyase D0812_00650 PF01040 UbiA prenyltransferase family D0812_00655 PF01553 Acyltransferase D0812_00665 PF01726 LexA DNA binding domain D0812_00665 PF00717 Peptidase S24-like D0812_00675 PF01554 MatE D0812_00680 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_00680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_00685 PF00440 Bacterial regulatory proteins, tetR family D0812_00695 PF05958 tRNA (Uracil-5-)-methyltransferase D0812_00700 PF00593 TonB dependent receptor D0812_00700 PF07715 TonB-dependent Receptor Plug Domain D0812_00710 PF01177 Asp/Glu/Hydantoin racemase D0812_00780 PF13091 PLD-like domain D0812_00790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D0812_00790 PF01565 FAD binding domain D0812_00795 PF03099 Biotin/lipoate A/B protein ligase family D0812_00795 PF02237 Biotin protein ligase C terminal domain D0812_00795 PF08279 HTH domain D0812_00800 PF00485 Phosphoribulokinase / Uridine kinase family D0812_00825 PF00009 Elongation factor Tu GTP binding domain D0812_00825 PF03144 Elongation factor Tu domain 2 D0812_00825 PF03143 Elongation factor Tu C-terminal domain D0812_00835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0812_00840 PF02357 Transcription termination factor nusG D0812_00840 PF00467 KOW motif D0812_00845 PF00298 Ribosomal protein L11, RNA binding domain D0812_00845 PF03946 Ribosomal protein L11, N-terminal domain D0812_00850 PF00687 Ribosomal protein L1p/L10e family D0812_00855 PF00466 Ribosomal protein L10 D0812_00860 PF00542 Ribosomal protein L7/L12 C-terminal domain D0812_00860 PF16320 Ribosomal protein L7/L12 dimerisation domain D0812_00865 PF04560 RNA polymerase Rpb2, domain 7 D0812_00865 PF04563 RNA polymerase beta subunit D0812_00865 PF04561 RNA polymerase Rpb2, domain 2 D0812_00865 PF00562 RNA polymerase Rpb2, domain 6 D0812_00865 PF04565 RNA polymerase Rpb2, domain 3 D0812_00865 PF10385 RNA polymerase beta subunit external 1 domain D0812_00870 PF00623 RNA polymerase Rpb1, domain 2 D0812_00870 PF04998 RNA polymerase Rpb1, domain 5 D0812_00870 PF04997 RNA polymerase Rpb1, domain 1 D0812_00870 PF05000 RNA polymerase Rpb1, domain 4 D0812_00870 PF04983 RNA polymerase Rpb1, domain 3 D0812_00880 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0812_00885 PF00293 NUDIX domain D0812_00885 PF09297 NADH pyrophosphatase zinc ribbon domain D0812_00890 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0812_00895 PF03167 Uracil DNA glycosylase superfamily D0812_00900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0812_00905 PF04222 Protein of unknown function (DUF416) D0812_00910 PF01595 Cyclin M transmembrane N-terminal domain D0812_00910 PF00571 CBS domain D0812_00915 PF00216 Bacterial DNA-binding protein D0812_00925 PF02844 Phosphoribosylglycinamide synthetase, N domain D0812_00925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0812_00925 PF02843 Phosphoribosylglycinamide synthetase, C domain D0812_00930 PF01808 AICARFT/IMPCHase bienzyme D0812_00930 PF02142 MGS-like domain D0812_00935 PF13411 MerR HTH family regulatory protein D0812_00940 PF18500 CadC C-terminal domain 1 D0812_00940 PF00486 Transcriptional regulatory protein, C terminal D0812_00950 PF13520 Amino acid permease D0812_00955 PF01276 Orn/Lys/Arg decarboxylase, major domain D0812_00955 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0812_00955 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0812_01000 PF13188 PAS domain D0812_01000 PF00990 Diguanylate cyclase, GGDEF domain D0812_01000 PF00563 EAL domain D0812_01000 PF03707 Bacterial signalling protein N terminal repeat D0812_01005 PF02954 Bacterial regulatory protein, Fis family D0812_01010 PF01207 Dihydrouridine synthase (Dus) D0812_01025 PF02785 Biotin carboxylase C-terminal domain D0812_01025 PF00289 Biotin carboxylase, N-terminal domain D0812_01025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0812_01030 PF00364 Biotin-requiring enzyme D0812_01035 PF01220 Dehydroquinase class II D0812_01040 PF13193 AMP-binding enzyme C-terminal domain D0812_01040 PF16177 Acetyl-coenzyme A synthetase N-terminus D0812_01040 PF00501 AMP-binding enzyme D0812_01055 PF12832 MFS_1 like family D0812_01060 PF00672 HAMP domain D0812_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_01060 PF00512 His Kinase A (phospho-acceptor) domain D0812_01060 PF01627 Hpt domain D0812_01060 PF00072 Response regulator receiver domain D0812_01065 PF10415 Fumarase C C-terminus D0812_01065 PF00206 Lyase D0812_01080 PF00474 Sodium:solute symporter family D0812_01090 PF01914 MarC family integral membrane protein D0812_01095 PF00196 Bacterial regulatory proteins, luxR family D0812_01095 PF00072 Response regulator receiver domain D0812_01100 PF11412 Disulphide bond corrector protein DsbC D0812_01100 PF02683 Cytochrome C biogenesis protein transmembrane region D0812_01105 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0812_01110 PF10415 Fumarase C C-terminus D0812_01110 PF00206 Lyase D0812_01115 PF04186 FxsA cytoplasmic membrane protein D0812_01120 PF00588 SpoU rRNA Methylase family D0812_01125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0812_01125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0812_01130 PF00672 HAMP domain D0812_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_01130 PF00512 His Kinase A (phospho-acceptor) domain D0812_01130 PF16527 Two-component sensor protein CpxA, periplasmic domain D0812_01135 PF00486 Transcriptional regulatory protein, C terminal D0812_01135 PF00072 Response regulator receiver domain D0812_01140 PF07813 LTXXQ motif family protein D0812_01145 PF01545 Cation efflux family D0812_01145 PF16916 Dimerisation domain of Zinc Transporter D0812_01150 PF00365 Phosphofructokinase D0812_01155 PF01554 MatE D0812_01160 PF00166 Chaperonin 10 Kd subunit D0812_01165 PF00118 TCP-1/cpn60 chaperonin family D0812_01175 PF02308 MgtC family D0812_01180 PF04055 Radical SAM superfamily D0812_01185 PF09285 Elongation factor P, C-terminal D0812_01185 PF01132 Elongation factor P (EF-P) OB domain D0812_01185 PF08207 Elongation factor P (EF-P) KOW-like domain D0812_01200 PF02313 Fumarate reductase subunit D D0812_01205 PF02300 Fumarate reductase subunit C D0812_01210 PF13183 4Fe-4S dicluster domain D0812_01210 PF13085 2Fe-2S iron-sulfur cluster binding domain D0812_01215 PF02910 Fumarate reductase flavoprotein C-term D0812_01215 PF00890 FAD binding domain D0812_01220 PF00152 tRNA synthetases class II (D, K and N) D0812_01230 PF08360 QacR-like protein, C-terminal region D0812_01230 PF00440 Bacterial regulatory proteins, tetR family D0812_01240 PF01551 Peptidase family M23 D0812_01245 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_01245 PF06426 Serine acetyltransferase, N-terminal D0812_01250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0812_01250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0812_01255 PF02556 Preprotein translocase subunit SecB D0812_01260 PF00581 Rhodanese-like domain D0812_01265 PF01676 Metalloenzyme superfamily D0812_01265 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0812_01275 PF00672 HAMP domain D0812_01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_01280 PF00939 Sodium:sulfate symporter transmembrane region D0812_01290 PF02666 Phosphatidylserine decarboxylase D0812_01295 PF03193 RsgA GTPase D0812_01300 PF00929 Exonuclease D0812_01375 PF08331 Domain of unknown function (DUF1730) D0812_01380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0812_01385 PF01520 N-acetylmuramoyl-L-alanine amidase D0812_01390 PF01119 DNA mismatch repair protein, C-terminal domain D0812_01390 PF08676 MutL C terminal dimerisation domain D0812_01400 PF17209 Hfq protein D0812_01405 PF13167 GTP-binding GTPase N-terminal D0812_01405 PF16360 GTP-binding GTPase Middle Region D0812_01405 PF01926 50S ribosome-binding GTPase D0812_01410 PF01145 SPFH domain / Band 7 family D0812_01410 PF12221 Bacterial membrane protein N terminal D0812_01415 PF01145 SPFH domain / Band 7 family D0812_01420 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0812_01425 PF00709 Adenylosuccinate synthetase D0812_01435 PF08238 Sel1 repeat D0812_01440 PF00175 Oxidoreductase NAD-binding domain D0812_01440 PF00042 Globin D0812_01440 PF00970 Oxidoreductase FAD-binding domain D0812_01445 PF02082 Transcriptional regulator D0812_01450 PF17876 Cold shock domain D0812_01450 PF08461 Ribonuclease R winged-helix domain D0812_01450 PF08206 Ribonuclease B OB domain D0812_01450 PF00773 RNB domain D0812_01450 PF00575 S1 RNA binding domain D0812_01455 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0812_01455 PF00588 SpoU rRNA Methylase family D0812_01460 PF13419 Haloacid dehalogenase-like hydrolase D0812_01465 PF00579 tRNA synthetases class I (W and Y) D0812_01475 PF00117 Glutamine amidotransferase class-I D0812_01480 PF00202 Aminotransferase class-III D0812_01485 PF04958 Arginine N-succinyltransferase beta subunit D0812_01490 PF00171 Aldehyde dehydrogenase family D0812_01500 PF13545 Crp-like helix-turn-helix domain D0812_01500 PF00027 Cyclic nucleotide-binding domain D0812_01505 PF00485 Phosphoribulokinase / Uridine kinase family D0812_01510 PF06794 Uncharacterised protein family (UPF0270) D0812_01515 PF00561 alpha/beta hydrolase fold D0812_01525 PF00005 ABC transporter D0812_01525 PF12848 ABC transporter D0812_01535 PF02525 Flavodoxin-like fold D0812_01540 PF00999 Sodium/hydrogen exchanger family D0812_01540 PF02254 TrkA-N domain D0812_01550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_01560 PF01112 Asparaginase D0812_01565 PF04102 SlyX D0812_01575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_01575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0812_01580 PF08348 YheO-like PAS domain D0812_01580 PF13309 HTH domain D0812_01585 PF02635 DsrE/DsrF-like family D0812_01590 PF02635 DsrE/DsrF-like family D0812_01595 PF04077 DsrH like protein D0812_01600 PF00164 Ribosomal protein S12/S23 D0812_01605 PF00177 Ribosomal protein S7p/S5e D0812_01610 PF03144 Elongation factor Tu domain 2 D0812_01610 PF03764 Elongation factor G, domain IV D0812_01610 PF14492 Elongation Factor G, domain II D0812_01610 PF00009 Elongation factor Tu GTP binding domain D0812_01610 PF00679 Elongation factor G C-terminus D0812_01615 PF03143 Elongation factor Tu C-terminal domain D0812_01615 PF03144 Elongation factor Tu domain 2 D0812_01615 PF00009 Elongation factor Tu GTP binding domain D0812_01620 PF04324 BFD-like [2Fe-2S] binding domain D0812_01625 PF00210 Ferritin-like domain D0812_01630 PF00390 Malic enzyme, N-terminal domain D0812_01630 PF03949 Malic enzyme, NAD binding domain D0812_01635 PF01340 Met Apo-repressor, MetJ D0812_01640 PF01053 Cys/Met metabolism PLP-dependent enzyme D0812_01645 PF00742 Homoserine dehydrogenase D0812_01645 PF00696 Amino acid kinase family D0812_01645 PF03447 Homoserine dehydrogenase, NAD binding domain D0812_01650 PF02219 Methylenetetrahydrofolate reductase D0812_01660 PF00311 Phosphoenolpyruvate carboxylase D0812_01665 PF07687 Peptidase dimerisation domain D0812_01665 PF01546 Peptidase family M20/M25/M40 D0812_01670 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0812_01670 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0812_01675 PF00696 Amino acid kinase family D0812_01680 PF00764 Arginosuccinate synthase D0812_01685 PF00206 Lyase D0812_01685 PF14698 Argininosuccinate lyase C-terminal D0812_01685 PF00583 Acetyltransferase (GNAT) family D0812_01700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_01700 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_01705 PF00462 Glutaredoxin D0812_01705 PF08534 Redoxin D0812_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_01710 PF03466 LysR substrate binding domain D0812_01715 PF00905 Penicillin binding protein transpeptidase domain D0812_01715 PF17092 Penicillin-binding protein OB-like domain D0812_01715 PF00912 Transglycosylase D0812_01740 PF00263 Bacterial type II and III secretion system protein D0812_01740 PF03958 Bacterial type II/III secretion system short domain D0812_01740 PF11741 AMIN domain D0812_01740 PF07660 Secretin and TonB N terminus short domain D0812_01745 PF01202 Shikimate kinase D0812_01750 PF01761 3-dehydroquinate synthase D0812_01760 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0812_01765 PF00834 Ribulose-phosphate 3 epimerase family D0812_01770 PF01250 Ribosomal protein S6 D0812_01775 PF00436 Single-strand binding protein family D0812_01780 PF01084 Ribosomal protein S18 D0812_01785 PF01281 Ribosomal protein L9, N-terminal domain D0812_01785 PF03948 Ribosomal protein L9, C-terminal domain D0812_01795 PF00772 DnaB-like helicase N terminal domain D0812_01795 PF03796 DnaB-like helicase C terminal domain D0812_01800 PF00842 Alanine racemase, C-terminal domain D0812_01800 PF01168 Alanine racemase, N-terminal domain D0812_01810 PF01894 Uncharacterised protein family UPF0047 D0812_01815 PF00342 Phosphoglucose isomerase D0812_01825 PF01475 Ferric uptake regulator family D0812_01830 PF01207 Dihydrouridine synthase (Dus) D0812_01850 PF00175 Oxidoreductase NAD-binding domain D0812_01850 PF00258 Flavodoxin D0812_01850 PF00667 FAD binding domain D0812_01855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0812_01855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0812_01860 PF01507 Phosphoadenosine phosphosulfate reductase family D0812_01915 PF00999 Sodium/hydrogen exchanger family D0812_01920 PF02607 B12 binding domain D0812_01920 PF02310 B12 binding domain D0812_01920 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0812_01920 PF00809 Pterin binding enzyme D0812_01920 PF02574 Homocysteine S-methyltransferase D0812_01925 PF00696 Amino acid kinase family D0812_01925 PF01842 ACT domain D0812_01935 PF00266 Aminotransferase class-V D0812_01945 PF00005 ABC transporter D0812_01945 PF17755 UvrA DNA-binding domain D0812_01945 PF17760 UvrA interaction domain D0812_01950 PF00483 Nucleotidyl transferase D0812_01955 PF00196 Bacterial regulatory proteins, luxR family D0812_01960 PF00436 Single-strand binding protein family D0812_01965 PF00563 EAL domain D0812_01965 PF00990 Diguanylate cyclase, GGDEF domain D0812_01965 PF17157 Gammaproteobacterial periplasmic sensor domain D0812_01985 PF00263 Bacterial type II and III secretion system protein D0812_01985 PF03958 Bacterial type II/III secretion system short domain D0812_01990 PF13401 AAA domain D0812_01990 PF01471 Putative peptidoglycan binding domain D0812_02000 PF00437 Type II/IV secretion system protein D0812_02000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0812_02005 PF00482 Type II secretion system (T2SS), protein F D0812_02015 PF08334 Type II secretion system (T2SS), protein G D0812_02015 PF07963 Prokaryotic N-terminal methylation motif D0812_02035 PF13737 Transposase DDE domain D0812_02060 PF04085 rod shape-determining protein MreC D0812_02065 PF04093 rod shape-determining protein MreD D0812_02070 PF02545 Maf-like protein D0812_02075 PF00575 S1 RNA binding domain D0812_02075 PF10150 Ribonuclease E/G family D0812_02080 PF13502 AsmA-like C-terminal region D0812_02080 PF13116 Protein of unknown function D0812_02085 PF00795 Carbon-nitrogen hydrolase D0812_02090 PF01523 Putative modulator of DNA gyrase D0812_02095 PF02562 PhoH-like protein D0812_02095 PF13638 PIN domain D0812_02100 PF18337 RapA N-terminal Tudor like domain D0812_02100 PF18339 RapA N-terminal Tudor like domain 1 D0812_02100 PF00176 SNF2 family N-terminal domain D0812_02100 PF12137 RNA polymerase recycling family C-terminal D0812_02100 PF00271 Helicase conserved C-terminal domain D0812_02110 PF00849 RNA pseudouridylate synthase D0812_02115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0812_02115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0812_02120 PF04751 Protein of unknown function (DUF615) D0812_02125 PF01523 Putative modulator of DNA gyrase D0812_02130 PF03448 MgtE intracellular N domain D0812_02130 PF00571 CBS domain D0812_02130 PF01769 Divalent cation transporter D0812_02135 PF00381 PTS HPr component phosphorylation site D0812_02140 PF03668 P-loop ATPase protein family D0812_02145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_02150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0812_02155 PF04963 Sigma-54 factor, core binding domain D0812_02155 PF04552 Sigma-54, DNA binding domain D0812_02155 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0812_02160 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0812_02160 PF00005 ABC transporter D0812_02165 PF03968 OstA-like protein D0812_02175 PF01380 SIS domain D0812_02175 PF00571 CBS domain D0812_02180 PF01699 Sodium/calcium exchanger protein D0812_02185 PF00005 ABC transporter D0812_02190 PF02405 Permease MlaE D0812_02195 PF02470 MlaD protein D0812_02200 PF05494 MlaC protein D0812_02210 PF01722 BolA-like protein D0812_02215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0812_02220 PF01553 Acyltransferase D0812_02225 PF01042 Endoribonuclease L-PSP D0812_02230 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0812_02230 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0812_02235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0812_02235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0812_02245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0812_02245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0812_02255 PF06877 Regulator of ribonuclease activity B D0812_02265 PF00583 Acetyltransferase (GNAT) family D0812_02275 PF08264 Anticodon-binding domain of tRNA D0812_02275 PF00133 tRNA synthetases class I (I, L, M and V) D0812_02275 PF10458 Valyl tRNA synthetase tRNA binding arm D0812_02280 PF04364 DNA polymerase III chi subunit, HolC D0812_02285 PF02789 Cytosol aminopeptidase family, N-terminal domain D0812_02285 PF00883 Cytosol aminopeptidase family, catalytic domain D0812_02290 PF03739 Lipopolysaccharide export system permease LptF/LptG D0812_02295 PF03739 Lipopolysaccharide export system permease LptF/LptG D0812_02305 PF00106 short chain dehydrogenase D0812_02315 PF01522 Polysaccharide deacetylase D0812_02320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_02325 PF02378 Phosphotransferase system, EIIC D0812_02330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0812_02335 PF02056 Family 4 glycosyl hydrolase D0812_02335 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0812_02340 PF04794 YdjC-like protein D0812_02350 PF00072 Response regulator receiver domain D0812_02400 PF00171 Aldehyde dehydrogenase family D0812_02430 PF00672 HAMP domain D0812_02430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_02430 PF17200 Single Cache domain 2 D0812_02470 PF01464 Transglycosylase SLT domain D0812_02470 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0812_02475 PF04362 Bacterial Fe(2+) trafficking D0812_02480 PF00633 Helix-hairpin-helix motif D0812_02480 PF00730 HhH-GPD superfamily base excision DNA repair protein D0812_02480 PF14815 NUDIX domain D0812_02485 PF02390 Putative methyltransferase D0812_02490 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0812_02495 PF04960 Glutaminase D0812_02500 PF04055 Radical SAM superfamily D0812_02500 PF06969 HemN C-terminal domain D0812_02505 PF01725 Ham1 family D0812_02515 PF02594 Uncharacterised ACR, YggU family COG1872 D0812_02520 PF02325 YGGT family D0812_02525 PF03807 NADP oxidoreductase coenzyme F420-dependent D0812_02525 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0812_02530 PF01168 Alanine racemase, N-terminal domain D0812_02535 PF00437 Type II/IV secretion system protein D0812_02540 PF00437 Type II/IV secretion system protein D0812_02545 PF03652 Holliday junction resolvase D0812_02550 PF02622 Uncharacterized ACR, COG1678 D0812_02555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0812_02555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0812_02560 PF04452 RNA methyltransferase D0812_02565 PF04231 Endonuclease I D0812_02570 PF10263 SprT-like family D0812_02570 PF17283 SprT-like zinc ribbon domain D0812_02580 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0812_02580 PF02772 S-adenosylmethionine synthetase, central domain D0812_02580 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0812_02585 PF02779 Transketolase, pyrimidine binding domain D0812_02585 PF00456 Transketolase, thiamine diphosphate binding domain D0812_02585 PF02780 Transketolase, C-terminal domain D0812_02595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0812_02595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0812_02600 PF00162 Phosphoglycerate kinase D0812_02605 PF01116 Fructose-bisphosphate aldolase class-II D0812_02610 PF05552 Conserved TM helix D0812_02610 PF00924 Mechanosensitive ion channel D0812_02620 PF01810 LysE type translocator D0812_02625 PF03466 LysR substrate binding domain D0812_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_02630 PF04402 Protein of unknown function (DUF541) D0812_02635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0812_02635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0812_02635 PF01842 ACT domain D0812_02640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0812_02645 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0812_02655 PF05164 Cell division protein ZapA D0812_02665 PF03695 Uncharacterised protein family (UPF0149) D0812_02670 PF01494 FAD binding domain D0812_02675 PF01494 FAD binding domain D0812_02695 PF03937 Flavinator of succinate dehydrogenase D0812_02705 PF02910 Fumarate reductase flavoprotein C-term D0812_02705 PF00890 FAD binding domain D0812_02715 PF08281 Sigma-70, region 4 D0812_02715 PF04542 Sigma-70 region 2 D0812_02720 PF03872 Anti sigma-E protein RseA, N-terminal domain D0812_02720 PF03873 Anti sigma-E protein RseA, C-terminal domain D0812_02725 PF03888 MucB/RseB N-terminal domain D0812_02725 PF17188 MucB/RseB C-terminal domain D0812_02735 PF03144 Elongation factor Tu domain 2 D0812_02735 PF00009 Elongation factor Tu GTP binding domain D0812_02735 PF00679 Elongation factor G C-terminus D0812_02735 PF06421 GTP-binding protein LepA C-terminus D0812_02740 PF10502 Signal peptidase, peptidase S26 D0812_02745 PF00035 Double-stranded RNA binding motif D0812_02745 PF14622 Ribonuclease-III-like D0812_02750 PF01926 50S ribosome-binding GTPase D0812_02750 PF07650 KH domain D0812_02755 PF02565 Recombination protein O C terminal D0812_02755 PF11967 Recombination protein O N terminal D0812_02760 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0812_02765 PF01648 4'-phosphopantetheinyl transferase superfamily D0812_02770 PF00072 Response regulator receiver domain D0812_02770 PF01627 Hpt domain D0812_02770 PF00512 His Kinase A (phospho-acceptor) domain D0812_02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_02770 PF00672 HAMP domain D0812_02770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0812_02780 PF05958 tRNA (Uracil-5-)-methyltransferase D0812_02780 PF01938 TRAM domain D0812_02785 PF13291 ACT domain D0812_02785 PF04607 Region found in RelA / SpoT proteins D0812_02785 PF02824 TGS domain D0812_02790 PF03819 MazG nucleotide pyrophosphohydrolase domain D0812_02795 PF06418 CTP synthase N-terminus D0812_02795 PF00117 Glutamine amidotransferase class-I D0812_02800 PF03952 Enolase, N-terminal domain D0812_02800 PF00113 Enolase, C-terminal TIM barrel domain D0812_02805 PF04977 Septum formation initiator D0812_02810 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0812_02815 PF02542 YgbB family D0812_02820 PF01142 tRNA pseudouridine synthase D (TruD) D0812_02825 PF01975 Survival protein SurE D0812_02835 PF01551 Peptidase family M23 D0812_02835 PF01476 LysM domain D0812_02840 PF04545 Sigma-70, region 4 D0812_02840 PF04539 Sigma-70 region 3 D0812_02840 PF00140 Sigma-70 factor, region 1.2 D0812_02840 PF04542 Sigma-70 region 2 D0812_02845 PF05190 MutS family domain IV D0812_02845 PF01624 MutS domain I D0812_02845 PF05192 MutS domain III D0812_02845 PF00488 MutS domain V D0812_02845 PF05188 MutS domain II D0812_02850 PF02464 Competence-damaged protein D0812_02855 PF00154 recA bacterial DNA recombination protein D0812_02860 PF02631 RecX family D0812_02865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0812_02865 PF02272 DHHA1 domain D0812_02865 PF01411 tRNA synthetases class II (A) D0812_02870 PF13840 ACT domain D0812_02870 PF01842 ACT domain D0812_02870 PF00696 Amino acid kinase family D0812_02875 PF02599 Global regulator protein family D0812_02955 PF00196 Bacterial regulatory proteins, luxR family D0812_02960 PF04277 Oxaloacetate decarboxylase, gamma chain D0812_02965 PF00364 Biotin-requiring enzyme D0812_02965 PF00682 HMGL-like D0812_02965 PF02436 Conserved carboxylase domain D0812_02970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0812_02980 PF09335 SNARE associated Golgi protein D0812_02985 PF05193 Peptidase M16 inactive domain D0812_02985 PF00675 Insulinase (Peptidase family M16) D0812_02990 PF04262 Glutamate-cysteine ligase D0812_03000 PF02664 S-Ribosylhomocysteinase (LuxS) D0812_03005 PF00571 CBS domain D0812_03005 PF01595 Cyclin M transmembrane N-terminal domain D0812_03005 PF03471 Transporter associated domain D0812_03010 PF01578 Cytochrome C assembly protein D0812_03015 PF02978 Signal peptide binding domain D0812_03015 PF02881 SRP54-type protein, helical bundle domain D0812_03015 PF00448 SRP54-type protein, GTPase domain D0812_03020 PF00886 Ribosomal protein S16 D0812_03025 PF05239 PRC-barrel domain D0812_03025 PF01782 RimM N-terminal domain D0812_03030 PF01746 tRNA (Guanine-1)-methyltransferase D0812_03035 PF01245 Ribosomal protein L19 D0812_03040 PF03884 DNA gyrase inhibitor YacG D0812_03045 PF07072 Cell division protein D0812_03050 PF01121 Dephospho-CoA kinase D0812_03055 PF06750 Bacterial Peptidase A24 N-terminal domain D0812_03055 PF01478 Type IV leader peptidase family D0812_03060 PF00482 Type II secretion system (T2SS), protein F D0812_03065 PF00437 Type II/IV secretion system protein D0812_03065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0812_03070 PF07963 Prokaryotic N-terminal methylation motif D0812_03070 PF00114 Pilin (bacterial filament) D0812_03080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0812_03080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0812_03085 PF01510 N-acetylmuramoyl-L-alanine amidase D0812_03090 PF07729 FCD domain D0812_03090 PF00392 Bacterial regulatory proteins, gntR family D0812_03095 PF17831 Pyruvate dehydrogenase E1 component middle domain D0812_03095 PF00456 Transketolase, thiamine diphosphate binding domain D0812_03100 PF00364 Biotin-requiring enzyme D0812_03100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0812_03100 PF02817 e3 binding domain D0812_03105 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_03105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_03110 PF00440 Bacterial regulatory proteins, tetR family D0812_03115 PF00156 Phosphoribosyl transferase domain D0812_03120 PF00484 Carbonic anhydrase D0812_03125 PF00916 Sulfate permease family D0812_03125 PF01740 STAS domain D0812_03130 PF00005 ABC transporter D0812_03135 PF01061 ABC-2 type transporter D0812_03140 PF03279 Bacterial lipid A biosynthesis acyltransferase D0812_03145 PF02569 Pantoate-beta-alanine ligase D0812_03150 PF02548 Ketopantoate hydroxymethyltransferase D0812_03155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0812_03160 PF12627 Probable RNA and SrmB- binding site of polymerase A D0812_03160 PF12626 Polymerase A arginine-rich C-terminus D0812_03160 PF01743 Poly A polymerase head domain D0812_03165 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0812_03170 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0812_03175 PF17746 SfsA N-terminal OB domain D0812_03175 PF03749 Sugar fermentation stimulation protein RE domain D0812_03180 PF08482 ATP-dependent helicase C-terminal D0812_03180 PF04408 Helicase associated domain (HA2) D0812_03180 PF00270 DEAD/DEAH box helicase D0812_03180 PF00271 Helicase conserved C-terminal domain D0812_03185 PF14814 Bifunctional transglycosylase second domain D0812_03185 PF00905 Penicillin binding protein transpeptidase domain D0812_03185 PF00912 Transglycosylase D0812_03190 PF01734 Patatin-like phospholipase D0812_03195 PF00330 Aconitase family (aconitate hydratase) D0812_03195 PF06434 Aconitate hydratase 2 N-terminus D0812_03195 PF11791 Aconitate B N-terminal domain D0812_03200 PF06062 Uncharacterised protein family (UPF0231) D0812_03205 PF00543 Nitrogen regulatory protein P-II D0812_03210 PF00909 Ammonium Transporter Family D0812_03215 PF13416 Bacterial extracellular solute-binding protein D0812_03230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0812_03230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0812_03230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0812_03230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0812_03235 PF06165 Glycosyltransferase family 36 D0812_03235 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0812_03240 PF00728 Glycosyl hydrolase family 20, catalytic domain D0812_03240 PF02838 Glycosyl hydrolase family 20, domain 2 D0812_03245 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0812_03255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_03255 PF00005 ABC transporter D0812_03260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_03260 PF00005 ABC transporter D0812_03265 PF12911 N-terminal TM domain of oligopeptide transport permease C D0812_03265 PF00528 Binding-protein-dependent transport system inner membrane component D0812_03270 PF00528 Binding-protein-dependent transport system inner membrane component D0812_03275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_03280 PF00072 Response regulator receiver domain D0812_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_03280 PF09308 LuxQ, periplasmic D0812_03280 PF00512 His Kinase A (phospho-acceptor) domain D0812_03290 PF05175 Methyltransferase small domain D0812_03290 PF08468 Methyltransferase small domain N-terminal D0812_03295 PF01594 AI-2E family transporter D0812_03305 PF00202 Aminotransferase class-III D0812_03310 PF01521 Iron-sulphur cluster biosynthesis D0812_03315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_03320 PF00873 AcrB/AcrD/AcrF family D0812_03325 PF08525 Opacity-associated protein A N-terminal motif D0812_03325 PF01551 Peptidase family M23 D0812_03325 PF01476 LysM domain D0812_03330 PF00579 tRNA synthetases class I (W and Y) D0812_03340 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0812_03345 PF13609 Gram-negative porin D0812_03350 PF03449 Transcription elongation factor, N-terminal D0812_03350 PF01272 Transcription elongation factor, GreA/GreB, C-term D0812_03355 PF01985 CRS1 / YhbY (CRM) domain D0812_03360 PF01728 FtsJ-like methyltransferase D0812_03365 PF17862 AAA+ lid domain D0812_03365 PF06480 FtsH Extracellular D0812_03365 PF01434 Peptidase family M41 D0812_03365 PF00004 ATPase family associated with various cellular activities (AAA) D0812_03370 PF00809 Pterin binding enzyme D0812_03375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0812_03375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0812_03375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0812_03375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0812_03380 PF03840 Preprotein translocase SecG subunit D0812_03395 PF02576 RimP N-terminal domain D0812_03395 PF17384 RimP C-terminal SH3 domain D0812_03400 PF00575 S1 RNA binding domain D0812_03400 PF13184 NusA-like KH domain D0812_03400 PF08529 NusA N-terminal domain D0812_03405 PF00009 Elongation factor Tu GTP binding domain D0812_03405 PF11987 Translation-initiation factor 2 D0812_03405 PF08364 Bacterial translation initiation factor IF-2 associated region D0812_03405 PF04760 Translation initiation factor IF-2, N-terminal region D0812_03410 PF02033 Ribosome-binding factor A D0812_03415 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0812_03415 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0812_03415 PF09157 Pseudouridine synthase II TruB, C-terminal D0812_03420 PF00312 Ribosomal protein S15 D0812_03425 PF01138 3' exoribonuclease family, domain 1 D0812_03425 PF03725 3' exoribonuclease family, domain 2 D0812_03425 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0812_03425 PF00013 KH domain D0812_03425 PF00575 S1 RNA binding domain D0812_03430 PF13181 Tetratricopeptide repeat D0812_03430 PF07719 Tetratricopeptide repeat D0812_03440 PF01554 MatE D0812_03455 PF03707 Bacterial signalling protein N terminal repeat D0812_03455 PF00990 Diguanylate cyclase, GGDEF domain D0812_03455 PF00563 EAL domain D0812_03465 PF13508 Acetyltransferase (GNAT) domain D0812_03485 PF05230 MASE2 domain D0812_03485 PF00990 Diguanylate cyclase, GGDEF domain D0812_03490 PF00009 Elongation factor Tu GTP binding domain D0812_03490 PF16658 Class II release factor RF3, C-terminal domain D0812_03490 PF03144 Elongation factor Tu domain 2 D0812_03495 PF01026 TatD related DNase D0812_03500 PF01773 Na+ dependent nucleoside transporter N-terminus D0812_03500 PF07662 Na+ dependent nucleoside transporter C-terminus D0812_03500 PF07670 Nucleoside recognition D0812_03505 PF01791 DeoC/LacD family aldolase D0812_03510 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0812_03510 PF00591 Glycosyl transferase family, a/b domain D0812_03510 PF02885 Glycosyl transferase family, helical bundle domain D0812_03515 PF01676 Metalloenzyme superfamily D0812_03520 PF01048 Phosphorylase superfamily D0812_03530 PF18429 Domain of unknown function (DUF5609) D0812_03540 PF18073 Rubredoxin metal binding domain D0812_03545 PF00679 Elongation factor G C-terminus D0812_03545 PF14492 Elongation Factor G, domain II D0812_03545 PF03764 Elongation factor G, domain IV D0812_03545 PF00009 Elongation factor Tu GTP binding domain D0812_03545 PF03144 Elongation factor Tu domain 2 D0812_03550 PF03466 LysR substrate binding domain D0812_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_03585 PF00501 AMP-binding enzyme D0812_03590 PF01464 Transglycosylase SLT domain D0812_03590 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0812_03615 PF13629 Pilus formation protein N terminal region D0812_03615 PF04972 BON domain D0812_03615 PF00263 Bacterial type II and III secretion system protein D0812_03630 PF00437 Type II/IV secretion system protein D0812_03665 PF05736 OprF membrane domain D0812_03665 PF00691 OmpA family D0812_03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_03675 PF03466 LysR substrate binding domain D0812_03680 PF01204 Trehalase D0812_03690 PF13520 Amino acid permease D0812_03695 PF04074 YhcH/YjgK/YiaL D0812_03700 PF16353 Domain of unknown function(DUF4981) D0812_03700 PF02929 Beta galactosidase small chain D0812_03700 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0812_03700 PF00703 Glycosyl hydrolases family 2 D0812_03700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0812_03705 PF00356 Bacterial regulatory proteins, lacI family D0812_03710 PF00905 Penicillin binding protein transpeptidase domain D0812_03710 PF03717 Penicillin-binding Protein dimerisation domain D0812_03715 PF16363 GDP-mannose 4,6 dehydratase D0812_03720 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0812_03720 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0812_03725 PF00288 GHMP kinases N terminal domain D0812_03725 PF10509 Galactokinase galactose-binding signature D0812_03725 PF08544 GHMP kinases C terminal D0812_03730 PF01263 Aldose 1-epimerase D0812_03740 PF00356 Bacterial regulatory proteins, lacI family D0812_03745 PF02378 Phosphotransferase system, EIIC D0812_03745 PF00367 phosphotransferase system, EIIB D0812_03755 PF01588 Putative tRNA binding domain D0812_03770 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0812_03770 PF01464 Transglycosylase SLT domain D0812_03775 PF01266 FAD dependent oxidoreductase D0812_03775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0812_03780 PF08220 DeoR-like helix-turn-helix domain D0812_03780 PF00455 DeoR C terminal sensor domain D0812_03785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0812_03785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0812_03790 PF00230 Major intrinsic protein D0812_03800 PF07690 Major Facilitator Superfamily D0812_03805 PF03009 Glycerophosphoryl diester phosphodiesterase family D0812_03820 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D0812_03820 PF14602 Hexapeptide repeat of succinyl-transferase D0812_03835 PF07130 YebG protein D0812_03840 PF03466 LysR substrate binding domain D0812_03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_03850 PF00884 Sulfatase D0812_03850 PF11893 Domain of unknown function (DUF3413) D0812_03855 PF17946 RecC C-terminal domain D0812_03860 PF00580 UvrD/REP helicase N-terminal domain D0812_03860 PF13361 UvrD-like helicase C-terminal domain D0812_03860 PF12705 PD-(D/E)XK nuclease superfamily D0812_03865 PF13538 UvrD-like helicase C-terminal domain D0812_03880 PF00583 Acetyltransferase (GNAT) family D0812_03880 PF00696 Amino acid kinase family D0812_03895 PF06725 3D domain D0812_03895 PF03562 MltA specific insert domain D0812_03900 PF00899 ThiF family D0812_03905 PF02657 Fe-S metabolism associated domain D0812_03910 PF00266 Aminotransferase class-V D0812_03915 PF01965 DJ-1/PfpI family D0812_03920 PF02558 Ketopantoate reductase PanE/ApbA D0812_03920 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0812_03925 PF03502 Nucleoside-specific channel-forming protein, Tsx D0812_03945 PF04545 Sigma-70, region 4 D0812_03945 PF04542 Sigma-70 region 2 D0812_03955 PF07690 Major Facilitator Superfamily D0812_03960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0812_03970 PF05175 Methyltransferase small domain D0812_03975 PF01722 BolA-like protein D0812_03980 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0812_03980 PF11973 NQRA C-terminal domain D0812_03985 PF03116 NQR2, RnfD, RnfE family D0812_03990 PF04205 FMN-binding domain D0812_03995 PF02508 Rnf-Nqr subunit, membrane protein D0812_04000 PF02508 Rnf-Nqr subunit, membrane protein D0812_04005 PF00970 Oxidoreductase FAD-binding domain D0812_04005 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_04005 PF00175 Oxidoreductase NAD-binding domain D0812_04010 PF02424 ApbE family D0812_04020 PF00990 Diguanylate cyclase, GGDEF domain D0812_04020 PF00072 Response regulator receiver domain D0812_04025 PF00817 impB/mucB/samB family D0812_04025 PF11798 IMS family HHH motif D0812_04025 PF11799 impB/mucB/samB family C-terminal domain D0812_04030 PF00271 Helicase conserved C-terminal domain D0812_04030 PF00570 HRDC domain D0812_04030 PF00270 DEAD/DEAH box helicase D0812_04030 PF09382 RQC domain D0812_04030 PF16124 RecQ zinc-binding D0812_04035 PF01272 Transcription elongation factor, GreA/GreB, C-term D0812_04035 PF03449 Transcription elongation factor, N-terminal D0812_04045 PF00041 Fibronectin type III domain D0812_04045 PF00704 Glycosyl hydrolases family 18 D0812_04050 PF00209 Sodium:neurotransmitter symporter family D0812_04060 PF06786 Uncharacterised protein family (UPF0253) D0812_04070 PF04073 Aminoacyl-tRNA editing domain D0812_04070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0812_04070 PF03129 Anticodon binding domain D0812_04075 PF01980 tRNA-methyltransferase O D0812_04075 PF18389 TrmO C-terminal domain D0812_04080 PF01197 Ribosomal protein L31 D0812_04085 PF00444 Ribosomal protein L36 D0812_04090 PF03806 AbgT putative transporter family D0812_04100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0812_04125 PF04287 tRNA pseudouridine synthase C D0812_04130 PF00849 RNA pseudouridylate synthase D0812_04135 PF11944 Protein of unknown function (DUF3461) D0812_04140 PF01842 ACT domain D0812_04140 PF01966 HD domain D0812_04140 PF08335 GlnD PII-uridylyltransferase D0812_04140 PF01909 Nucleotidyltransferase domain D0812_04145 PF00557 Metallopeptidase family M24 D0812_04150 PF00318 Ribosomal protein S2 D0812_04155 PF00889 Elongation factor TS D0812_04160 PF00696 Amino acid kinase family D0812_04165 PF01765 Ribosome recycling factor D0812_04170 PF01255 Putative undecaprenyl diphosphate synthase D0812_04180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0812_04180 PF13288 DXP reductoisomerase C-terminal domain D0812_04180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0812_04185 PF02163 Peptidase family M50 D0812_04185 PF17820 PDZ domain D0812_04190 PF01103 Surface antigen D0812_04190 PF07244 Surface antigen variable number repeat D0812_04195 PF03938 Outer membrane protein (OmpH-like) D0812_04200 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_04200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D0812_04205 PF07977 FabA-like domain D0812_04210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0812_04210 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_04215 PF02684 Lipid-A-disaccharide synthetase D0812_04220 PF01351 Ribonuclease HII D0812_04225 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0812_04225 PF01336 OB-fold nucleic acid binding domain D0812_04225 PF02811 PHP domain D0812_04225 PF14579 Helix-hairpin-helix motif D0812_04225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0812_04230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0812_04235 PF01171 PP-loop family D0812_04235 PF09179 TilS substrate binding domain D0812_04235 PF11734 TilS substrate C-terminal domain D0812_04240 PF00034 Cytochrome c D0812_04245 PF00543 Nitrogen regulatory protein P-II D0812_04260 PF01476 LysM domain D0812_04260 PF01464 Transglycosylase SLT domain D0812_04265 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0812_04270 PF08241 Methyltransferase domain D0812_04275 PF00075 RNase H D0812_04280 PF00929 Exonuclease D0812_04300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0812_04300 PF02770 Acyl-CoA dehydrogenase, middle domain D0812_04300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0812_04300 PF09317 Domain of unknown function (DUF1974) D0812_04305 PF13580 SIS domain D0812_04310 PF13230 Glutamine amidotransferases class-II D0812_04315 PF00551 Formyl transferase D0812_04320 PF00586 AIR synthase related protein, N-terminal domain D0812_04320 PF02769 AIR synthase related protein, C-terminal domain D0812_04330 PF00860 Permease family D0812_04345 PF03358 NADPH-dependent FMN reductase D0812_04350 PF03960 ArsC family D0812_04355 PF01435 Peptidase family M48 D0812_04355 PF13181 Tetratricopeptide repeat D0812_04365 PF01594 AI-2E family transporter D0812_04370 PF00578 AhpC/TSA family D0812_04375 PF01842 ACT domain D0812_04380 PF00701 Dihydrodipicolinate synthetase family D0812_04400 PF07687 Peptidase dimerisation domain D0812_04400 PF01546 Peptidase family M20/M25/M40 D0812_04405 PF03960 ArsC family D0812_04425 PF11143 Protein of unknown function (DUF2919) D0812_04430 PF04261 Dyp-type peroxidase family D0812_04435 PF12833 Helix-turn-helix domain D0812_04440 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0812_04440 PF02056 Family 4 glycosyl hydrolase D0812_04455 PF00700 Bacterial flagellin C-terminal helical region D0812_04455 PF00669 Bacterial flagellin N-terminal helical region D0812_04455 PF07196 Flagellin hook IN motif D0812_04465 PF00700 Bacterial flagellin C-terminal helical region D0812_04465 PF07196 Flagellin hook IN motif D0812_04465 PF00669 Bacterial flagellin N-terminal helical region D0812_04470 PF00700 Bacterial flagellin C-terminal helical region D0812_04470 PF07196 Flagellin hook IN motif D0812_04470 PF00669 Bacterial flagellin N-terminal helical region D0812_04475 PF03646 FlaG protein D0812_04480 PF07195 Flagellar hook-associated protein 2 C-terminus D0812_04480 PF07196 Flagellin hook IN motif D0812_04480 PF02465 Flagellar hook-associated protein 2 N-terminus D0812_04490 PF02561 Flagellar protein FliS D0812_04495 PF02954 Bacterial regulatory protein, Fis family D0812_04495 PF00072 Response regulator receiver domain D0812_04495 PF00158 Sigma-54 interaction domain D0812_04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_04500 PF00512 His Kinase A (phospho-acceptor) domain D0812_04505 PF00072 Response regulator receiver domain D0812_04505 PF00158 Sigma-54 interaction domain D0812_04505 PF02954 Bacterial regulatory protein, Fis family D0812_04510 PF02049 Flagellar hook-basal body complex protein FliE D0812_04515 PF08345 Flagellar M-ring protein C-terminal D0812_04515 PF01514 Secretory protein of YscJ/FliF family D0812_04520 PF14841 FliG middle domain D0812_04520 PF14842 FliG N-terminal domain D0812_04520 PF01706 FliG C-terminal domain D0812_04530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_04530 PF18269 T3SS EscN ATPase C-terminal domain D0812_04555 PF02154 Flagellar motor switch protein FliM D0812_04555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0812_04560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0812_04565 PF04347 Flagellar biosynthesis protein, FliO D0812_04570 PF00813 FliP family D0812_04575 PF01313 Bacterial export proteins, family 3 D0812_04580 PF01311 Bacterial export proteins, family 1 D0812_04585 PF01312 FlhB HrpN YscU SpaS Family D0812_04590 PF00771 FHIPEP family D0812_04595 PF00448 SRP54-type protein, GTPase domain D0812_04600 PF10609 NUBPL iron-transfer P-loop NTPase D0812_04605 PF04539 Sigma-70 region 3 D0812_04605 PF04542 Sigma-70 region 2 D0812_04605 PF04545 Sigma-70, region 4 D0812_04610 PF00072 Response regulator receiver domain D0812_04615 PF04344 Chemotaxis phosphatase, CheZ D0812_04620 PF02895 Signal transducing histidine kinase, homodimeric domain D0812_04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_04620 PF01627 Hpt domain D0812_04620 PF07194 P2 response regulator binding domain D0812_04620 PF01584 CheW-like domain D0812_04625 PF00072 Response regulator receiver domain D0812_04625 PF01339 CheB methylesterase D0812_04630 PF13614 AAA domain D0812_04640 PF01584 CheW-like domain D0812_04650 PF00005 ABC transporter D0812_04655 PF03379 CcmB protein D0812_04660 PF01578 Cytochrome C assembly protein D0812_04670 PF03100 CcmE D0812_04675 PF01578 Cytochrome C assembly protein D0812_04675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0812_04680 PF08534 Redoxin D0812_04685 PF03918 Cytochrome C biogenesis protein D0812_04690 PF03918 Cytochrome C biogenesis protein D0812_04695 PF04333 MlaA lipoprotein D0812_04700 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0812_04705 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0812_04715 PF04542 Sigma-70 region 2 D0812_04715 PF08281 Sigma-70, region 4 D0812_04720 PF00108 Thiolase, N-terminal domain D0812_04720 PF02803 Thiolase, C-terminal domain D0812_04725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0812_04725 PF00378 Enoyl-CoA hydratase/isomerase D0812_04725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0812_04730 PF00675 Insulinase (Peptidase family M16) D0812_04730 PF16187 Middle or third domain of peptidase_M16 D0812_04730 PF05193 Peptidase M16 inactive domain D0812_04735 PF00300 Histidine phosphatase superfamily (branch 1) D0812_04740 PF01713 Smr domain D0812_04745 PF05175 Methyltransferase small domain D0812_04750 PF01264 Chorismate synthase D0812_04755 PF03458 UPF0126 domain D0812_04760 PF04315 Elongation factor P hydroxylase D0812_04765 PF08891 YfcL protein D0812_04780 PF01266 FAD dependent oxidoreductase D0812_04780 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0812_04785 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_04785 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_04795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0812_04795 PF11890 Domain of unknown function (DUF3410) D0812_04795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0812_04800 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0812_04800 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0812_04810 PF01416 tRNA pseudouridine synthase D0812_04820 PF01039 Carboxyl transferase domain D0812_04820 PF17848 Acetyl-coA carboxylase zinc finger domain D0812_04825 PF02875 Mur ligase family, glutamate ligase domain D0812_04825 PF08245 Mur ligase middle domain D0812_04830 PF05036 Sporulation related domain D0812_04835 PF02674 Colicin V production protein D0812_04840 PF00156 Phosphoribosyl transferase domain D0812_04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_04845 PF03466 LysR substrate binding domain D0812_04850 PF00072 Response regulator receiver domain D0812_04860 PF04304 Protein of unknown function (DUF454) D0812_04865 PF00156 Phosphoribosyl transferase domain D0812_04870 PF12169 DNA polymerase III subunits gamma and tau domain III D0812_04870 PF12170 DNA polymerase III tau subunit V interacting with alpha D0812_04875 PF02575 YbaB/EbfC DNA-binding family D0812_04880 PF13662 Toprim domain D0812_04880 PF02132 RecR protein D0812_04885 PF00230 Major intrinsic protein D0812_04895 PF01042 Endoribonuclease L-PSP D0812_04900 PF03313 Serine dehydratase alpha chain D0812_04905 PF08348 YheO-like PAS domain D0812_04905 PF13309 HTH domain D0812_04910 PF03692 Putative zinc- or iron-chelating domain D0812_04920 PF03692 Putative zinc- or iron-chelating domain D0812_04925 PF04226 Transglycosylase associated protein D0812_04930 PF06826 Predicted Permease Membrane Region D0812_04935 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0812_04940 PF00924 Mechanosensitive ion channel D0812_04940 PF05552 Conserved TM helix D0812_04950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_04960 PF00245 Alkaline phosphatase D0812_04975 PF13847 Methyltransferase domain D0812_04980 PF13426 PAS domain D0812_04980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_04980 PF08447 PAS fold D0812_04985 PF01156 Inosine-uridine preferring nucleoside hydrolase D0812_04995 PF01263 Aldose 1-epimerase D0812_05000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0812_05000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0812_05005 PF01641 SelR domain D0812_05015 PF07023 Protein of unknown function (DUF1315) D0812_05020 PF00710 Asparaginase, N-terminal D0812_05020 PF17763 Glutaminase/Asparaginase C-terminal domain D0812_05025 PF01343 Peptidase family S49 D0812_05030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_05035 PF00881 Nitroreductase family D0812_05040 PF01131 DNA topoisomerase D0812_05040 PF01751 Toprim domain D0812_05050 PF00106 short chain dehydrogenase D0812_05055 PF00850 Histone deacetylase domain D0812_05060 PF05987 Bacterial protein of unknown function (DUF898) D0812_05075 PF11893 Domain of unknown function (DUF3413) D0812_05075 PF00884 Sulfatase D0812_05080 PF07208 Protein of unknown function (DUF1414) D0812_05085 PF04245 37-kD nucleoid-associated bacterial protein D0812_05100 PF03553 Na+/H+ antiporter family D0812_05105 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0812_05105 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0812_05110 PF07963 Prokaryotic N-terminal methylation motif D0812_05110 PF00114 Pilin (bacterial filament) D0812_05115 PF00027 Cyclic nucleotide-binding domain D0812_05115 PF00520 Ion transport protein D0812_05120 PF01914 MarC family integral membrane protein D0812_05125 PF00171 Aldehyde dehydrogenase family D0812_05125 PF00465 Iron-containing alcohol dehydrogenase D0812_05140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0812_05140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0812_05145 PF00462 Glutaredoxin D0812_05150 PF02899 Phage integrase, N-terminal SAM-like domain D0812_05150 PF00589 Phage integrase family D0812_05205 PF00691 OmpA family D0812_05205 PF01389 OmpA-like transmembrane domain D0812_05215 PF00691 OmpA family D0812_05215 PF01389 OmpA-like transmembrane domain D0812_05260 PF04002 RadC-like JAB domain D0812_05290 PF03432 Relaxase/Mobilisation nuclease domain D0812_05290 PF18821 Large polyvalent protein-associated domain 7 D0812_05315 PF02534 Type IV secretory system Conjugative DNA transfer D0812_05320 PF00437 Type II/IV secretion system protein D0812_05325 PF03743 Bacterial conjugation TrbI-like protein D0812_05330 PF03524 Conjugal transfer protein D0812_05355 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0812_05390 PF03553 Na+/H+ antiporter family D0812_05390 PF13726 Na+-H+ antiporter family D0812_05395 PF00929 Exonuclease D0812_05400 PF18393 MotY N-terminal domain D0812_05400 PF00691 OmpA family D0812_05405 PF10952 Protein of unknown function (DUF2753) D0812_05410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_05440 PF02954 Bacterial regulatory protein, Fis family D0812_05455 PF04717 Type VI secretion system, phage-baseplate injector D0812_05470 PF00069 Protein kinase domain D0812_05470 PF03781 Sulfatase-modifying factor enzyme 1 D0812_05485 PF13538 UvrD-like helicase C-terminal domain D0812_05485 PF14490 Helix-hairpin-helix containing domain D0812_05485 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D0812_05515 PF10576 Iron-sulfur binding domain of endonuclease III D0812_05515 PF00633 Helix-hairpin-helix motif D0812_05515 PF00730 HhH-GPD superfamily base excision DNA repair protein D0812_05520 PF02508 Rnf-Nqr subunit, membrane protein D0812_05525 PF04205 FMN-binding domain D0812_05530 PF03116 NQR2, RnfD, RnfE family D0812_05535 PF10531 SLBB domain D0812_05535 PF13375 RnfC Barrel sandwich hybrid domain D0812_05535 PF12838 4Fe-4S dicluster domain D0812_05535 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0812_05540 PF04060 Putative Fe-S cluster D0812_05545 PF02508 Rnf-Nqr subunit, membrane protein D0812_05550 PF01228 Glycine radical D0812_05550 PF02901 Pyruvate formate lyase-like D0812_05565 PF17757 UvrB interaction domain D0812_05565 PF12344 Ultra-violet resistance protein B D0812_05565 PF02151 UvrB/uvrC motif D0812_05565 PF04851 Type III restriction enzyme, res subunit D0812_05565 PF00271 Helicase conserved C-terminal domain D0812_05570 PF02954 Bacterial regulatory protein, Fis family D0812_05570 PF00158 Sigma-54 interaction domain D0812_05570 PF00072 Response regulator receiver domain D0812_05575 PF01627 Hpt domain D0812_05580 PF01933 Uncharacterised protein family UPF0052 D0812_05585 PF04055 Radical SAM superfamily D0812_05585 PF06463 Molybdenum Cofactor Synthesis C D0812_05590 PF00994 Probable molybdopterin binding domain D0812_05595 PF01967 MoaC family D0812_05600 PF02597 ThiS family D0812_05605 PF02391 MoaE protein D0812_05610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_05615 PF00528 Binding-protein-dependent transport system inner membrane component D0812_05620 PF12911 N-terminal TM domain of oligopeptide transport permease C D0812_05620 PF00528 Binding-protein-dependent transport system inner membrane component D0812_05625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_05625 PF00005 ABC transporter D0812_05630 PF00005 ABC transporter D0812_05630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_05635 PF13409 Glutathione S-transferase, N-terminal domain D0812_05640 PF13194 Domain of unknown function (DUF4010) D0812_05650 PF01515 Phosphate acetyl/butaryl transferase D0812_05650 PF07085 DRTGG domain D0812_05655 PF00871 Acetokinase family D0812_05660 PF04217 Protein of unknown function, DUF412 D0812_05675 PF02653 Branched-chain amino acid transport system / permease component D0812_05680 PF00005 ABC transporter D0812_05685 PF02903 Alpha amylase, N-terminal ig-like domain D0812_05685 PF00128 Alpha amylase, catalytic domain D0812_05695 PF01207 Dihydrouridine synthase (Dus) D0812_05700 PF03695 Uncharacterised protein family (UPF0149) D0812_05700 PF02810 SEC-C motif D0812_05705 PF02600 Disulfide bond formation protein DsbB D0812_05710 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0812_05715 PF00392 Bacterial regulatory proteins, gntR family D0812_05715 PF07840 FadR C-terminal domain D0812_05740 PF01588 Putative tRNA binding domain D0812_05740 PF09334 tRNA synthetases class I (M) D0812_05745 PF10609 NUBPL iron-transfer P-loop NTPase D0812_05750 PF00485 Phosphoribulokinase / Uridine kinase family D0812_05760 PF12557 Cob(I)alamin adenosyltransferase N terminal D0812_05760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0812_05765 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0812_05770 PF01740 STAS domain D0812_05770 PF00916 Sulfate permease family D0812_05780 PF12111 Polyribonucleotide phosphorylase C terminal D0812_05780 PF10150 Ribonuclease E/G family D0812_05780 PF00575 S1 RNA binding domain D0812_05785 PF00849 RNA pseudouridylate synthase D0812_05785 PF01479 S4 domain D0812_05790 PF02545 Maf-like protein D0812_05795 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0812_05800 PF01783 Ribosomal L32p protein family D0812_05805 PF02504 Fatty acid synthesis protein D0812_05810 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0812_05810 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0812_05815 PF00698 Acyl transferase domain D0812_05825 PF00550 Phosphopantetheine attachment site D0812_05830 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_05830 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_05835 PF01063 Amino-transferase class IV D0812_05840 PF02618 YceG-like family D0812_05845 PF02223 Thymidylate kinase D0812_05850 PF09115 DNA polymerase III, delta subunit, C terminal D0812_05855 PF01026 TatD related DNase D0812_05860 PF02378 Phosphotransferase system, EIIC D0812_05860 PF00367 phosphotransferase system, EIIB D0812_05875 PF00209 Sodium:neurotransmitter symporter family D0812_05890 PF01734 Patatin-like phospholipase D0812_05895 PF02887 Pyruvate kinase, alpha/beta domain D0812_05895 PF00224 Pyruvate kinase, barrel domain D0812_05900 PF00480 ROK family D0812_05905 PF00072 Response regulator receiver domain D0812_05905 PF01584 CheW-like domain D0812_05910 PF14579 Helix-hairpin-helix motif D0812_05910 PF01336 OB-fold nucleic acid binding domain D0812_05910 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0812_05910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0812_05910 PF02811 PHP domain D0812_05925 PF00106 short chain dehydrogenase D0812_05930 PF08496 Peptidase family S49 N-terminal D0812_05930 PF01343 Peptidase family S49 D0812_05935 PF08787 Alginate lyase D0812_05940 PF02224 Cytidylate kinase D0812_05945 PF00575 S1 RNA binding domain D0812_05950 PF00216 Bacterial DNA-binding protein D0812_05955 PF06305 Lipopolysaccharide assembly protein A domain D0812_05960 PF18073 Rubredoxin metal binding domain D0812_05965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0812_05970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_06030 PF00884 Sulfatase D0812_06035 PF00440 Bacterial regulatory proteins, tetR family D0812_06035 PF16925 Tetracyclin repressor-like, C-terminal domain D0812_06040 PF03886 ABC-type transport auxiliary lipoprotein component D0812_06045 PF02470 MlaD protein D0812_06050 PF04403 Paraquat-inducible protein A D0812_06055 PF00356 Bacterial regulatory proteins, lacI family D0812_06060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0812_06065 PF00034 Cytochrome c D0812_06070 PF01568 Molydopterin dinucleotide binding domain D0812_06070 PF00384 Molybdopterin oxidoreductase D0812_06070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_06075 PF03916 Polysulphide reductase, NrfD D0812_06080 PF13247 4Fe-4S dicluster domain D0812_06085 PF00512 His Kinase A (phospho-acceptor) domain D0812_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_06090 PF00072 Response regulator receiver domain D0812_06090 PF00196 Bacterial regulatory proteins, luxR family D0812_06095 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0812_06095 PF16353 Domain of unknown function(DUF4981) D0812_06095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0812_06095 PF00703 Glycosyl hydrolases family 2 D0812_06095 PF02929 Beta galactosidase small chain D0812_06105 PF02264 LamB porin D0812_06110 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0812_06110 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0812_06120 PF01966 HD domain D0812_06125 PF03466 LysR substrate binding domain D0812_06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_06135 PF02683 Cytochrome C biogenesis protein transmembrane region D0812_06135 PF11412 Disulphide bond corrector protein DsbC D0812_06140 PF00085 Thioredoxin D0812_06150 PF05958 tRNA (Uracil-5-)-methyltransferase D0812_06155 PF00583 Acetyltransferase (GNAT) family D0812_06160 PF13302 Acetyltransferase (GNAT) domain D0812_06170 PF00583 Acetyltransferase (GNAT) family D0812_06175 PF00440 Bacterial regulatory proteins, tetR family D0812_06185 PF12464 Maltose acetyltransferase D0812_06185 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_06185 PF14602 Hexapeptide repeat of succinyl-transferase D0812_06190 PF00583 Acetyltransferase (GNAT) family D0812_06210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_06220 PF02687 FtsX-like permease family D0812_06220 PF00005 ABC transporter D0812_06220 PF12704 MacB-like periplasmic core domain D0812_06225 PF12704 MacB-like periplasmic core domain D0812_06225 PF02687 FtsX-like permease family D0812_06225 PF00005 ABC transporter D0812_06230 PF00005 ABC transporter D0812_06230 PF12704 MacB-like periplasmic core domain D0812_06230 PF02687 FtsX-like permease family D0812_06240 PF11490 DNA polymerase III polC-type N-terminus II D0812_06240 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0812_06240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0812_06240 PF02811 PHP domain D0812_06240 PF14579 Helix-hairpin-helix motif D0812_06240 PF00929 Exonuclease D0812_06255 PF08267 Cobalamin-independent synthase, N-terminal domain D0812_06255 PF01717 Cobalamin-independent synthase, Catalytic domain D0812_06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_06265 PF00529 HlyD membrane-fusion protein of T1SS D0812_06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_06270 PF03466 LysR substrate binding domain D0812_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_06310 PF00672 HAMP domain D0812_06310 PF00512 His Kinase A (phospho-acceptor) domain D0812_06315 PF00486 Transcriptional regulatory protein, C terminal D0812_06315 PF00072 Response regulator receiver domain D0812_06320 PF00535 Glycosyl transferase family 2 D0812_06325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D0812_06335 PF00672 HAMP domain D0812_06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_06340 PF13309 HTH domain D0812_06340 PF08348 YheO-like PAS domain D0812_06345 PF01042 Endoribonuclease L-PSP D0812_06350 PF00375 Sodium:dicarboxylate symporter family D0812_06355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_06375 PF08497 Radical SAM N-terminal D0812_06375 PF04055 Radical SAM superfamily D0812_06375 PF11842 Domain of unknown function (DUF3362) D0812_06380 PF00563 EAL domain D0812_06380 PF01590 GAF domain D0812_06380 PF00990 Diguanylate cyclase, GGDEF domain D0812_06380 PF00360 Phytochrome region D0812_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_06395 PF03466 LysR substrate binding domain D0812_06400 PF01717 Cobalamin-independent synthase, Catalytic domain D0812_06400 PF08267 Cobalamin-independent synthase, N-terminal domain D0812_06410 PF03795 YCII-related domain D0812_06415 PF03061 Thioesterase superfamily D0812_06420 PF04279 Intracellular septation protein A D0812_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_06430 PF00072 Response regulator receiver domain D0812_06435 PF17327 Acyl homoserine lactone synthase D0812_06440 PF00375 Sodium:dicarboxylate symporter family D0812_06445 PF00290 Tryptophan synthase alpha chain D0812_06450 PF00291 Pyridoxal-phosphate dependent enzyme D0812_06455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0812_06455 PF00218 Indole-3-glycerol phosphate synthase D0812_06460 PF00591 Glycosyl transferase family, a/b domain D0812_06460 PF02885 Glycosyl transferase family, helical bundle domain D0812_06465 PF00117 Glutamine amidotransferase class-I D0812_06470 PF04715 Anthranilate synthase component I, N terminal region D0812_06470 PF00425 chorismate binding enzyme D0812_06475 PF08056 Tryptophan operon leader peptide D0812_06480 PF02811 PHP domain D0812_06485 PF01300 Telomere recombination D0812_06495 PF00849 RNA pseudouridylate synthase D0812_06495 PF01479 S4 domain D0812_06500 PF04269 Protein of unknown function, DUF440 D0812_06505 PF08207 Elongation factor P (EF-P) KOW-like domain D0812_06505 PF01132 Elongation factor P (EF-P) OB domain D0812_06505 PF09285 Elongation factor P, C-terminal D0812_06515 PF03104 DNA polymerase family B, exonuclease domain D0812_06515 PF00136 DNA polymerase family B D0812_06520 PF00196 Bacterial regulatory proteins, luxR family D0812_06520 PF00072 Response regulator receiver domain D0812_06525 PF02151 UvrB/uvrC motif D0812_06525 PF01541 GIY-YIG catalytic domain D0812_06525 PF08459 UvrC Helix-hairpin-helix N-terminal D0812_06530 PF01066 CDP-alcohol phosphatidyltransferase D0812_06555 PF00202 Aminotransferase class-III D0812_06560 PF16653 Saccharopine dehydrogenase C-terminal domain D0812_06560 PF03435 Saccharopine dehydrogenase NADP binding domain D0812_06565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0812_06580 PF00994 Probable molybdopterin binding domain D0812_06590 PF00268 Ribonucleotide reductase, small chain D0812_06595 PF03477 ATP cone domain D0812_06595 PF00317 Ribonucleotide reductase, all-alpha domain D0812_06595 PF02867 Ribonucleotide reductase, barrel domain D0812_06610 PF03989 DNA gyrase C-terminal domain, beta-propeller D0812_06610 PF00521 DNA gyrase/topoisomerase IV, subunit A D0812_06625 PF02335 Cytochrome c552 D0812_06635 PF13247 4Fe-4S dicluster domain D0812_06640 PF03916 Polysulphide reductase, NrfD D0812_06645 PF01578 Cytochrome C assembly protein D0812_06645 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0812_06650 PF08534 Redoxin D0812_06655 PF03918 Cytochrome C biogenesis protein D0812_06665 PF00925 GTP cyclohydrolase II D0812_06690 PF03734 L,D-transpeptidase catalytic domain D0812_06690 PF01471 Putative peptidoglycan binding domain D0812_06695 PF05951 Bacterial protein of unknown function (DUF882) D0812_06700 PF00753 Metallo-beta-lactamase superfamily D0812_06715 PF03480 Bacterial extracellular solute-binding protein, family 7 D0812_06725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0812_06730 PF17200 Single Cache domain 2 D0812_06730 PF07730 Histidine kinase D0812_06735 PF00196 Bacterial regulatory proteins, luxR family D0812_06735 PF00072 Response regulator receiver domain D0812_06740 PF01047 MarR family D0812_06745 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_06750 PF00672 HAMP domain D0812_06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_06770 PF00155 Aminotransferase class I and II D0812_06775 PF00672 HAMP domain D0812_06775 PF01966 HD domain D0812_06780 PF00474 Sodium:solute symporter family D0812_06785 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0812_06785 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0812_06790 PF00356 Bacterial regulatory proteins, lacI family D0812_06805 PF00155 Aminotransferase class I and II D0812_06805 PF00392 Bacterial regulatory proteins, gntR family D0812_06820 PF00152 tRNA synthetases class II (D, K and N) D0812_06820 PF01336 OB-fold nucleic acid binding domain D0812_06825 PF02743 Cache domain D0812_06825 PF00672 HAMP domain D0812_06825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_06830 PF01242 6-pyruvoyl tetrahydropterin synthase D0812_06835 PF00196 Bacterial regulatory proteins, luxR family D0812_06835 PF00072 Response regulator receiver domain D0812_06845 PF03707 Bacterial signalling protein N terminal repeat D0812_06845 PF13188 PAS domain D0812_06845 PF00563 EAL domain D0812_06845 PF00990 Diguanylate cyclase, GGDEF domain D0812_06850 PF03315 Serine dehydratase beta chain D0812_06850 PF03313 Serine dehydratase alpha chain D0812_06855 PF03222 Tryptophan/tyrosine permease family D0812_06860 PF00293 NUDIX domain D0812_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_06870 PF00512 His Kinase A (phospho-acceptor) domain D0812_06870 PF09308 LuxQ, periplasmic D0812_06870 PF00072 Response regulator receiver domain D0812_06875 PF04715 Anthranilate synthase component I, N terminal region D0812_06875 PF00425 chorismate binding enzyme D0812_06890 PF04317 YcjX-like family, DUF463 D0812_06895 PF05128 Domain of unknown function (DUF697) D0812_06900 PF00158 Sigma-54 interaction domain D0812_06900 PF18024 Helix-turn-helix domain D0812_06905 PF13302 Acetyltransferase (GNAT) domain D0812_06920 PF00589 Phage integrase family D0812_06920 PF13495 Phage integrase, N-terminal SAM-like domain D0812_07095 PF04229 GrpB protein D0812_07115 PF13276 HTH-like domain D0812_07115 PF00665 Integrase core domain D0812_07115 PF13333 Integrase core domain D0812_07130 PF13737 Transposase DDE domain D0812_07145 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_07305 PF00293 NUDIX domain D0812_07325 PF01844 HNH endonuclease D0812_07425 PF13276 HTH-like domain D0812_07425 PF00665 Integrase core domain D0812_07425 PF13333 Integrase core domain D0812_07500 PF01638 HxlR-like helix-turn-helix D0812_07510 PF03575 Peptidase family S51 D0812_07530 PF00474 Sodium:solute symporter family D0812_07545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0812_07555 PF03480 Bacterial extracellular solute-binding protein, family 7 D0812_07560 PF00356 Bacterial regulatory proteins, lacI family D0812_07565 PF03328 HpcH/HpaI aldolase/citrate lyase family D0812_07585 PF00561 alpha/beta hydrolase fold D0812_07600 PF00583 Acetyltransferase (GNAT) family D0812_07605 PF00939 Sodium:sulfate symporter transmembrane region D0812_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_07610 PF00512 His Kinase A (phospho-acceptor) domain D0812_07610 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_07615 PF02954 Bacterial regulatory protein, Fis family D0812_07615 PF00072 Response regulator receiver domain D0812_07615 PF00158 Sigma-54 interaction domain D0812_07620 PF03707 Bacterial signalling protein N terminal repeat D0812_07620 PF00990 Diguanylate cyclase, GGDEF domain D0812_07620 PF00563 EAL domain D0812_07625 PF01966 HD domain D0812_07625 PF11871 Domain of unknown function (DUF3391) D0812_07630 PF01810 LysE type translocator D0812_07635 PF11230 Protein of unknown function (DUF3029) D0812_07640 PF04055 Radical SAM superfamily D0812_07645 PF03466 LysR substrate binding domain D0812_07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_07650 PF03741 Integral membrane protein TerC family D0812_07660 PF01966 HD domain D0812_07665 PF00106 short chain dehydrogenase D0812_07670 PF17158 Membrane-associated sensor, integral membrane domain D0812_07670 PF00990 Diguanylate cyclase, GGDEF domain D0812_07680 PF00465 Iron-containing alcohol dehydrogenase D0812_07685 PF03222 Tryptophan/tyrosine permease family D0812_07705 PF00664 ABC transporter transmembrane region D0812_07705 PF00005 ABC transporter D0812_07710 PF00005 ABC transporter D0812_07710 PF00664 ABC transporter transmembrane region D0812_07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_07725 PF03466 LysR substrate binding domain D0812_07735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0812_07735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0812_07750 PF00012 Hsp70 protein D0812_07755 PF00012 Hsp70 protein D0812_07765 PF00990 Diguanylate cyclase, GGDEF domain D0812_07790 PF03413 Peptidase propeptide and YPEB domain D0812_07790 PF07504 Fungalysin/Thermolysin Propeptide Motif D0812_07790 PF01447 Thermolysin metallopeptidase, catalytic domain D0812_07790 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0812_07790 PF04151 Bacterial pre-peptidase C-terminal domain D0812_07800 PF01568 Molydopterin dinucleotide binding domain D0812_07800 PF00384 Molybdopterin oxidoreductase D0812_07800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_07805 PF12800 4Fe-4S binding domain D0812_07805 PF13247 4Fe-4S dicluster domain D0812_07810 PF04976 DMSO reductase anchor subunit (DmsC) D0812_07815 PF02613 Nitrate reductase delta subunit D0812_07825 PF02525 Flavodoxin-like fold D0812_07830 PF04408 Helicase associated domain (HA2) D0812_07830 PF11898 Domain of unknown function (DUF3418) D0812_07830 PF00270 DEAD/DEAH box helicase D0812_07830 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0812_07830 PF00271 Helicase conserved C-terminal domain D0812_07860 PF04204 Homoserine O-succinyltransferase D0812_07885 PF00893 Small Multidrug Resistance protein D0812_07890 PF13520 Amino acid permease D0812_07895 PF01810 LysE type translocator D0812_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_07900 PF03466 LysR substrate binding domain D0812_07905 PF01370 NAD dependent epimerase/dehydratase family D0812_07910 PF03466 LysR substrate binding domain D0812_07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_07915 PF03279 Bacterial lipid A biosynthesis acyltransferase D0812_07920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_07930 PF01047 MarR family D0812_07945 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0812_07950 PF01810 LysE type translocator D0812_07960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0812_07965 PF03440 Aerolysin/Pertussis toxin (APT) domain D0812_07965 PF01117 Aerolysin toxin D0812_07980 PF01235 Sodium:alanine symporter family D0812_08000 PF02311 AraC-like ligand binding domain D0812_08000 PF12833 Helix-turn-helix domain D0812_08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_08035 PF03466 LysR substrate binding domain D0812_08040 PF00884 Sulfatase D0812_08045 PF01406 tRNA synthetases class I (C) catalytic domain D0812_08050 PF01554 MatE D0812_08055 PF00571 CBS domain D0812_08065 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_08070 PF00583 Acetyltransferase (GNAT) family D0812_08075 PF00202 Aminotransferase class-III D0812_08080 PF06339 Ectoine synthase D0812_08085 PF00696 Amino acid kinase family D0812_08085 PF13840 ACT domain D0812_08095 PF00248 Aldo/keto reductase family D0812_08100 PF03466 LysR substrate binding domain D0812_08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_08105 PF03150 Di-haem cytochrome c peroxidase D0812_08105 PF00034 Cytochrome c D0812_08110 PF00082 Subtilase family D0812_08110 PF04151 Bacterial pre-peptidase C-terminal domain D0812_08110 PF05922 Peptidase inhibitor I9 D0812_08115 PF03466 LysR substrate binding domain D0812_08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_08135 PF12833 Helix-turn-helix domain D0812_08140 PF00892 EamA-like transporter family D0812_08145 PF00174 Oxidoreductase molybdopterin binding domain D0812_08150 PF01794 Ferric reductase like transmembrane component D0812_08160 PF03466 LysR substrate binding domain D0812_08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_08165 PF16363 GDP-mannose 4,6 dehydratase D0812_08185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_08200 PF13693 Winged helix-turn-helix DNA-binding D0812_08210 PF13401 AAA domain D0812_08210 PF09077 Mu B transposition protein, C terminal D0812_08240 PF04245 37-kD nucleoid-associated bacterial protein D0812_08265 PF02810 SEC-C motif D0812_08430 PF01555 DNA methylase D0812_08460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0812_08460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0812_08475 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_08475 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_08490 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_08490 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_08515 PF00221 Aromatic amino acid lyase D0812_08520 PF00535 Glycosyl transferase family 2 D0812_08525 PF07977 FabA-like domain D0812_08530 PF13193 AMP-binding enzyme C-terminal domain D0812_08530 PF00501 AMP-binding enzyme D0812_08540 PF00550 Phosphopantetheine attachment site D0812_08545 PF00550 Phosphopantetheine attachment site D0812_08570 PF04820 Tryptophan halogenase D0812_08600 PF00425 chorismate binding enzyme D0812_08605 PF00501 AMP-binding enzyme D0812_08605 PF13193 AMP-binding enzyme C-terminal domain D0812_08610 PF00550 Phosphopantetheine attachment site D0812_08610 PF00857 Isochorismatase family D0812_08615 PF00501 AMP-binding enzyme D0812_08615 PF13193 AMP-binding enzyme C-terminal domain D0812_08615 PF00668 Condensation domain D0812_08615 PF00975 Thioesterase domain D0812_08615 PF13193 AMP-binding enzyme C-terminal domain D0812_08615 PF00668 Condensation domain D0812_08615 PF00550 Phosphopantetheine attachment site D0812_08615 PF00975 Thioesterase domain D0812_08615 PF00550 Phosphopantetheine attachment site D0812_08615 PF00501 AMP-binding enzyme D0812_08630 PF00593 TonB dependent receptor D0812_08630 PF07715 TonB-dependent Receptor Plug Domain D0812_08635 PF01595 Cyclin M transmembrane N-terminal domain D0812_08635 PF00571 CBS domain D0812_08635 PF03471 Transporter associated domain D0812_08640 PF00270 DEAD/DEAH box helicase D0812_08640 PF00271 Helicase conserved C-terminal domain D0812_08645 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_08650 PF02254 TrkA-N domain D0812_08650 PF02080 TrkA-C domain D0812_08655 PF02386 Cation transport protein D0812_08670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0812_08675 PF03480 Bacterial extracellular solute-binding protein, family 7 D0812_08680 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0812_08685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0812_08695 PF02954 Bacterial regulatory protein, Fis family D0812_08695 PF00072 Response regulator receiver domain D0812_08695 PF00158 Sigma-54 interaction domain D0812_08700 PF02743 Cache domain D0812_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_08700 PF00512 His Kinase A (phospho-acceptor) domain D0812_08705 PF05698 Bacterial trigger factor protein (TF) C-terminus D0812_08705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_08705 PF05697 Bacterial trigger factor protein (TF) D0812_08710 PF00574 Clp protease D0812_08715 PF06689 ClpX C4-type zinc finger D0812_08715 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_08715 PF07724 AAA domain (Cdc48 subfamily) D0812_08720 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0812_08720 PF05362 Lon protease (S16) C-terminal proteolytic domain D0812_08720 PF00004 ATPase family associated with various cellular activities (AAA) D0812_08725 PF00216 Bacterial DNA-binding protein D0812_08730 PF13145 PPIC-type PPIASE domain D0812_08750 PF13286 Phosphohydrolase-associated domain D0812_08750 PF01966 HD domain D0812_08760 PF00155 Aminotransferase class I and II D0812_08765 PF00425 chorismate binding enzyme D0812_08770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0812_08770 PF16582 Middle domain of thiamine pyrophosphate D0812_08770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0812_08775 PF12697 Alpha/beta hydrolase family D0812_08780 PF00378 Enoyl-CoA hydratase/isomerase D0812_08785 PF13378 Enolase C-terminal domain-like D0812_08790 PF13193 AMP-binding enzyme C-terminal domain D0812_08790 PF00501 AMP-binding enzyme D0812_08795 PF00367 phosphotransferase system, EIIB D0812_08795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0812_08795 PF02378 Phosphotransferase system, EIIC D0812_08800 PF03466 LysR substrate binding domain D0812_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_08810 PF03601 Conserved hypothetical protein 698 D0812_08815 PF07690 Major Facilitator Superfamily D0812_08860 PF13533 Biotin-lipoyl like D0812_08865 PF00873 AcrB/AcrD/AcrF family D0812_08880 PF00291 Pyridoxal-phosphate dependent enzyme D0812_08885 PF01037 Lrp/AsnC ligand binding domain D0812_08885 PF13404 AsnC-type helix-turn-helix domain D0812_08900 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0812_08905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0812_08915 PF17152 Periplasmic sensor domain D0812_08915 PF00990 Diguanylate cyclase, GGDEF domain D0812_08945 PF00350 Dynamin family D0812_08965 PF00690 Cation transporter/ATPase, N-terminus D0812_08965 PF00689 Cation transporting ATPase, C-terminus D0812_08970 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0812_08970 PF00588 SpoU rRNA Methylase family D0812_08975 PF00037 4Fe-4S binding domain D0812_08975 PF11953 Domain of unknown function (DUF3470) D0812_08985 PF00478 IMP dehydrogenase / GMP reductase domain D0812_08985 PF00571 CBS domain D0812_08990 PF01554 MatE D0812_08995 PF00403 Heavy-metal-associated domain D0812_09000 PF01048 Phosphorylase superfamily D0812_09010 PF00672 HAMP domain D0812_09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_09015 PF01230 HIT domain D0812_09030 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0812_09030 PF13036 Peptidoglycan-synthase activator LpoB D0812_09040 PF05728 Uncharacterised protein family (UPF0227) D0812_09045 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_09060 PF17757 UvrB interaction domain D0812_09060 PF00270 DEAD/DEAH box helicase D0812_09060 PF03461 TRCF domain D0812_09060 PF02559 CarD-like/TRCF domain D0812_09060 PF00271 Helicase conserved C-terminal domain D0812_09070 PF12704 MacB-like periplasmic core domain D0812_09070 PF02687 FtsX-like permease family D0812_09075 PF00005 ABC transporter D0812_09080 PF02687 FtsX-like permease family D0812_09080 PF12704 MacB-like periplasmic core domain D0812_09090 PF00753 Metallo-beta-lactamase superfamily D0812_09090 PF03772 Competence protein D0812_09095 PF00005 ABC transporter D0812_09095 PF00664 ABC transporter transmembrane region D0812_09100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0812_09105 PF03966 Trm112p-like protein D0812_09110 PF02348 Cytidylyltransferase D0812_09115 PF04293 SpoVR like protein D0812_09120 PF04285 Protein of unknown function (DUF444) D0812_09125 PF08298 PrkA AAA domain D0812_09125 PF06798 PrkA serine protein kinase C-terminal domain D0812_09135 PF03887 YfbU domain D0812_09145 PF04055 Radical SAM superfamily D0812_09155 PF01228 Glycine radical D0812_09155 PF02901 Pyruvate formate lyase-like D0812_09170 PF00005 ABC transporter D0812_09175 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_09180 PF00528 Binding-protein-dependent transport system inner membrane component D0812_09185 PF00528 Binding-protein-dependent transport system inner membrane component D0812_09195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_09195 PF00529 HlyD membrane-fusion protein of T1SS D0812_09200 PF00664 ABC transporter transmembrane region D0812_09200 PF00005 ABC transporter D0812_09205 PF03372 Endonuclease/Exonuclease/phosphatase family D0812_09210 PF00672 HAMP domain D0812_09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_09215 PF10689 Protein of unknown function (DUF2496) D0812_09220 PF07445 Primosomal replication protein priC D0812_09225 PF01925 Sulfite exporter TauE/SafE D0812_09230 PF06733 DEAD_2 D0812_09230 PF13307 Helicase C-terminal domain D0812_09235 PF13609 Gram-negative porin D0812_09240 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0812_09245 PF00849 RNA pseudouridylate synthase D0812_09250 PF03971 Monomeric isocitrate dehydrogenase D0812_09255 PF00313 'Cold-shock' DNA-binding domain D0812_09260 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0812_09265 PF00004 ATPase family associated with various cellular activities (AAA) D0812_09265 PF07724 AAA domain (Cdc48 subfamily) D0812_09265 PF02861 Clp amino terminal domain, pathogenicity island component D0812_09265 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_09265 PF17871 AAA lid domain D0812_09270 PF01176 Translation initiation factor 1A / IF-1 D0812_09275 PF04376 Arginine-tRNA-protein transferase, N terminus D0812_09275 PF04377 Arginine-tRNA-protein transferase, C terminus D0812_09280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0812_09290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0812_09295 PF10692 Protein of unknown function (DUF2498) D0812_09300 PF01131 DNA topoisomerase D0812_09300 PF01751 Toprim domain D0812_09300 PF01396 Topoisomerase DNA binding C4 zinc finger D0812_09300 PF08272 Topoisomerase I zinc-ribbon-like D0812_09305 PF00483 Nucleotidyl transferase D0812_09310 PF08323 Starch synthase catalytic domain D0812_09310 PF00534 Glycosyl transferases group 1 D0812_09330 PF04994 TfoX C-terminal domain D0812_09330 PF04993 TfoX N-terminal domain D0812_09335 PF00356 Bacterial regulatory proteins, lacI family D0812_09340 PF02613 Nitrate reductase delta subunit D0812_09345 PF00072 Response regulator receiver domain D0812_09345 PF00486 Transcriptional regulatory protein, C terminal D0812_09350 PF02698 DUF218 domain D0812_09360 PF03882 MukF winged-helix domain D0812_09360 PF17193 MukF C-terminal domain D0812_09360 PF17192 MukF middle domain D0812_09365 PF04288 MukE-like family D0812_09370 PF04310 MukB N-terminal D0812_09370 PF16330 MukB hinge domain D0812_09375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0812_09375 PF12833 Helix-turn-helix domain D0812_09380 PF00171 Aldehyde dehydrogenase family D0812_09385 PF00501 AMP-binding enzyme D0812_09385 PF13193 AMP-binding enzyme C-terminal domain D0812_09390 PF05199 GMC oxidoreductase D0812_09390 PF00732 GMC oxidoreductase D0812_09410 PF18030 RimK PreATP-grasp domain D0812_09410 PF08443 RimK-like ATP-grasp domain D0812_09420 PF08003 Protein of unknown function (DUF1698) D0812_09425 PF13649 Methyltransferase domain D0812_09430 PF01904 Protein of unknown function DUF72 D0812_09435 PF02938 GAD domain D0812_09435 PF01336 OB-fold nucleic acid binding domain D0812_09435 PF00152 tRNA synthetases class II (D, K and N) D0812_09440 PF02075 Crossover junction endodeoxyribonuclease RuvC D0812_09445 PF00672 HAMP domain D0812_09445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_09445 PF02203 Tar ligand binding domain homologue D0812_09450 PF07499 RuvA, C-terminal domain D0812_09450 PF01330 RuvA N terminal domain D0812_09455 PF17864 RuvB AAA lid domain D0812_09455 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0812_09455 PF05491 RuvB C-terminal winged helix domain D0812_09460 PF01654 Cytochrome bd terminal oxidase subunit I D0812_09465 PF02322 Cytochrome bd terminal oxidase subunit II D0812_09470 PF08173 Membrane bound YbgT-like protein D0812_09480 PF03061 Thioesterase superfamily D0812_09485 PF01618 MotA/TolQ/ExbB proton channel family D0812_09490 PF02472 Biopolymer transport protein ExbD/TolR D0812_09500 PF04052 TolB amino-terminal domain D0812_09500 PF07676 WD40-like Beta Propeller Repeat D0812_09505 PF00691 OmpA family D0812_09510 PF16331 TolA binding protein trimerisation D0812_09510 PF13174 Tetratricopeptide repeat D0812_09515 PF02445 Quinolinate synthetase A protein D0812_09525 PF03994 Domain of Unknown Function (DUF350) D0812_09535 PF03738 Glutathionylspermidine synthase preATP-grasp D0812_09545 PF09308 LuxQ, periplasmic D0812_09545 PF00072 Response regulator receiver domain D0812_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_09545 PF00512 His Kinase A (phospho-acceptor) domain D0812_09550 PF06610 L-alanine exporter D0812_09575 PF08463 EcoEI R protein C-terminal D0812_09575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0812_09575 PF04851 Type III restriction enzyme, res subunit D0812_09575 PF00271 Helicase conserved C-terminal domain D0812_09620 PF04055 Radical SAM superfamily D0812_09625 PF06508 Queuosine biosynthesis protein QueC D0812_09630 PF01227 GTP cyclohydrolase I D0812_09635 PF18337 RapA N-terminal Tudor like domain D0812_09635 PF00271 Helicase conserved C-terminal domain D0812_09635 PF12137 RNA polymerase recycling family C-terminal D0812_09635 PF18339 RapA N-terminal Tudor like domain 1 D0812_09635 PF00176 SNF2 family N-terminal domain D0812_09640 PF16124 RecQ zinc-binding D0812_09640 PF00570 HRDC domain D0812_09640 PF00271 Helicase conserved C-terminal domain D0812_09640 PF00270 DEAD/DEAH box helicase D0812_09640 PF09382 RQC domain D0812_09700 PF00884 Sulfatase D0812_09715 PF00367 phosphotransferase system, EIIB D0812_09715 PF02378 Phosphotransferase system, EIIC D0812_09720 PF00232 Glycosyl hydrolase family 1 D0812_09725 PF03831 PhnA domain D0812_09725 PF08274 PhnA Zinc-Ribbon D0812_09730 PF00027 Cyclic nucleotide-binding domain D0812_09730 PF13545 Crp-like helix-turn-helix domain D0812_09755 PF01554 MatE D0812_09760 PF00005 ABC transporter D0812_09760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_09765 PF00005 ABC transporter D0812_09765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_09770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_09775 PF00528 Binding-protein-dependent transport system inner membrane component D0812_09785 PF02743 Cache domain D0812_09785 PF00672 HAMP domain D0812_09785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_09800 PF00529 HlyD membrane-fusion protein of T1SS D0812_09800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_09805 PF00873 AcrB/AcrD/AcrF family D0812_09815 PF07729 FCD domain D0812_09815 PF00392 Bacterial regulatory proteins, gntR family D0812_09825 PF07687 Peptidase dimerisation domain D0812_09825 PF01546 Peptidase family M20/M25/M40 D0812_09830 PF03606 C4-dicarboxylate anaerobic carrier D0812_09840 PF00593 TonB dependent receptor D0812_09840 PF07715 TonB-dependent Receptor Plug Domain D0812_09850 PF01032 FecCD transport family D0812_09855 PF01032 FecCD transport family D0812_09860 PF00005 ABC transporter D0812_09880 PF00474 Sodium:solute symporter family D0812_09895 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_09895 PF01464 Transglycosylase SLT domain D0812_09905 PF02811 PHP domain D0812_09905 PF00929 Exonuclease D0812_09905 PF14579 Helix-hairpin-helix motif D0812_09905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0812_09905 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0812_09910 PF00571 CBS domain D0812_09915 PF00392 Bacterial regulatory proteins, gntR family D0812_09915 PF07729 FCD domain D0812_09925 PF00392 Bacterial regulatory proteins, gntR family D0812_09925 PF07729 FCD domain D0812_09935 PF08787 Alginate lyase D0812_09940 PF00141 Peroxidase D0812_09950 PF02614 Glucuronate isomerase D0812_09955 PF00474 Sodium:solute symporter family D0812_09970 PF07883 Cupin domain D0812_09980 PF01614 Bacterial transcriptional regulator D0812_09980 PF09339 IclR helix-turn-helix domain D0812_09990 PF00579 tRNA synthetases class I (W and Y) D0812_09995 PF03773 Predicted permease D0812_10020 PF03372 Endonuclease/Exonuclease/phosphatase family D0812_10030 PF01752 Collagenase D0812_10030 PF08453 Peptidase family M9 N-terminal D0812_10030 PF04151 Bacterial pre-peptidase C-terminal domain D0812_10035 PF01970 Tripartite tricarboxylate transporter TctA family D0812_10045 PF03401 Tripartite tricarboxylate transporter family receptor D0812_10055 PF01979 Amidohydrolase family D0812_10070 PF08787 Alginate lyase D0812_10075 PF05426 Alginate lyase D0812_10075 PF07940 Heparinase II/III-like protein D0812_10080 PF07940 Heparinase II/III-like protein D0812_10080 PF05426 Alginate lyase D0812_10085 PF07883 Cupin domain D0812_10090 PF00294 pfkB family carbohydrate kinase D0812_10095 PF01081 KDPG and KHG aldolase D0812_10110 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0812_10120 PF03466 LysR substrate binding domain D0812_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_10130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0812_10130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0812_10135 PF01037 Lrp/AsnC ligand binding domain D0812_10140 PF01580 FtsK/SpoIIIE family D0812_10140 PF09397 Ftsk gamma domain D0812_10140 PF17854 FtsK alpha domain D0812_10140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0812_10145 PF03548 Outer membrane lipoprotein carrier protein LolA D0812_10150 PF12002 MgsA AAA+ ATPase C terminal D0812_10150 PF16193 AAA C-terminal domain D0812_10150 PF00004 ATPase family associated with various cellular activities (AAA) D0812_10155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0812_10155 PF02403 Seryl-tRNA synthetase N-terminal domain D0812_10165 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0812_10170 PF00202 Aminotransferase class-III D0812_10175 PF04055 Radical SAM superfamily D0812_10175 PF06968 Biotin and Thiamin Synthesis associated domain D0812_10180 PF00155 Aminotransferase class I and II D0812_10185 PF08241 Methyltransferase domain D0812_10200 PF01435 Peptidase family M48 D0812_10210 PF00106 short chain dehydrogenase D0812_10235 PF16036 Chalcone isomerase-like D0812_10245 PF00206 Lyase D0812_10245 PF08328 Adenylosuccinate lyase C-terminal D0812_10250 PF04356 Protein of unknown function (DUF489) D0812_10265 PF00294 pfkB family carbohydrate kinase D0812_10270 PF00816 H-NS histone family D0812_10275 PF03553 Na+/H+ antiporter family D0812_10280 PF08029 HisG, C-terminal domain D0812_10280 PF01634 ATP phosphoribosyltransferase D0812_10285 PF00815 Histidinol dehydrogenase D0812_10290 PF00155 Aminotransferase class I and II D0812_10295 PF08645 Polynucleotide kinase 3 phosphatase D0812_10295 PF00475 Imidazoleglycerol-phosphate dehydratase D0812_10300 PF00117 Glutamine amidotransferase class-I D0812_10305 PF00977 Histidine biosynthesis protein D0812_10310 PF00977 Histidine biosynthesis protein D0812_10315 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0812_10315 PF01502 Phosphoribosyl-AMP cyclohydrolase D0812_10320 PF02810 SEC-C motif D0812_10325 PF08668 HDOD domain D0812_10325 PF00563 EAL domain D0812_10330 PF00149 Calcineurin-like phosphoesterase D0812_10335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0812_10340 PF01406 tRNA synthetases class I (C) catalytic domain D0812_10340 PF09190 DALR domain D0812_10345 PF00265 Thymidine kinase D0812_10350 PF02698 DUF218 domain D0812_10375 PF01226 Formate/nitrite transporter D0812_10380 PF03649 Uncharacterised protein family (UPF0014) D0812_10385 PF06796 Periplasmic nitrate reductase protein NapE D0812_10390 PF03264 NapC/NirT cytochrome c family, N-terminal region D0812_10395 PF18364 Molybdopterin oxidoreductase N-terminal domain D0812_10395 PF01568 Molydopterin dinucleotide binding domain D0812_10395 PF00384 Molybdopterin oxidoreductase D0812_10410 PF01368 DHH family D0812_10410 PF02833 DHHA2 domain D0812_10420 PF00005 ABC transporter D0812_10425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_10425 PF00005 ABC transporter D0812_10430 PF12911 N-terminal TM domain of oligopeptide transport permease C D0812_10430 PF00528 Binding-protein-dependent transport system inner membrane component D0812_10435 PF00528 Binding-protein-dependent transport system inner membrane component D0812_10440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_10445 PF00158 Sigma-54 interaction domain D0812_10445 PF02954 Bacterial regulatory protein, Fis family D0812_10450 PF04012 PspA/IM30 family D0812_10455 PF06667 Phage shock protein B D0812_10460 PF04024 PspC domain D0812_10470 PF13533 Biotin-lipoyl like D0812_10475 PF00873 AcrB/AcrD/AcrF family D0812_10480 PF03352 Methyladenine glycosylase D0812_10485 PF03280 Proteobacterial lipase chaperone protein D0812_10490 PF00561 alpha/beta hydrolase fold D0812_10495 PF01053 Cys/Met metabolism PLP-dependent enzyme D0812_10500 PF13396 Phospholipase_D-nuclease N-terminal D0812_10500 PF13091 PLD-like domain D0812_10505 PF00209 Sodium:neurotransmitter symporter family D0812_10510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_10510 PF00672 HAMP domain D0812_10510 PF12729 Four helix bundle sensory module for signal transduction D0812_10515 PF00849 RNA pseudouridylate synthase D0812_10530 PF00970 Oxidoreductase FAD-binding domain D0812_10530 PF00175 Oxidoreductase NAD-binding domain D0812_10530 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_10535 PF03063 Prismane/CO dehydrogenase family D0812_10540 PF00158 Sigma-54 interaction domain D0812_10540 PF01590 GAF domain D0812_10545 PF01066 CDP-alcohol phosphatidyltransferase D0812_10550 PF00005 ABC transporter D0812_10555 PF00528 Binding-protein-dependent transport system inner membrane component D0812_10560 PF13416 Bacterial extracellular solute-binding protein D0812_10565 PF09335 SNARE associated Golgi protein D0812_10575 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_10575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0812_10585 PF00512 His Kinase A (phospho-acceptor) domain D0812_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_10590 PF00196 Bacterial regulatory proteins, luxR family D0812_10590 PF00072 Response regulator receiver domain D0812_10600 PF00916 Sulfate permease family D0812_10600 PF01740 STAS domain D0812_10610 PF06945 Protein of unknown function (DUF1289) D0812_10625 PF02872 5'-nucleotidase, C-terminal domain D0812_10625 PF00149 Calcineurin-like phosphoesterase D0812_10640 PF01386 Ribosomal L25p family D0812_10650 PF02709 N-terminal domain of galactosyltransferase D0812_10650 PF00535 Glycosyl transferase family 2 D0812_10660 PF00512 His Kinase A (phospho-acceptor) domain D0812_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_10660 PF00672 HAMP domain D0812_10665 PF00072 Response regulator receiver domain D0812_10665 PF00486 Transcriptional regulatory protein, C terminal D0812_10675 PF17155 Gammaproteobacterial periplasmic sensor domain D0812_10675 PF00990 Diguanylate cyclase, GGDEF domain D0812_10680 PF00271 Helicase conserved C-terminal domain D0812_10680 PF04851 Type III restriction enzyme, res subunit D0812_10685 PF01479 S4 domain D0812_10685 PF00849 RNA pseudouridylate synthase D0812_10690 PF07690 Major Facilitator Superfamily D0812_10700 PF01734 Patatin-like phospholipase D0812_10705 PF11066 Protein of unknown function (DUF2867) D0812_10705 PF13460 NAD(P)H-binding D0812_10710 PF01554 MatE D0812_10715 PF00005 ABC transporter D0812_10730 PF06965 Na+/H+ antiporter 1 D0812_10735 PF00440 Bacterial regulatory proteins, tetR family D0812_10735 PF16295 Tetracyclin repressor-like, C-terminal domain D0812_10740 PF09317 Domain of unknown function (DUF1974) D0812_10740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0812_10740 PF02770 Acyl-CoA dehydrogenase, middle domain D0812_10740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0812_10745 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0812_10745 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0812_10745 PF07055 Enoyl reductase FAD binding domain D0812_10750 PF02080 TrkA-C domain D0812_10750 PF06826 Predicted Permease Membrane Region D0812_10755 PF00462 Glutaredoxin D0812_10760 PF00465 Iron-containing alcohol dehydrogenase D0812_10765 PF01418 Helix-turn-helix domain, rpiR family D0812_10765 PF01380 SIS domain D0812_10770 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0812_10780 PF03956 Lysine exporter LysO D0812_10795 PF04994 TfoX C-terminal domain D0812_10795 PF04993 TfoX N-terminal domain D0812_10810 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_10810 PF00512 His Kinase A (phospho-acceptor) domain D0812_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_10820 PF00266 Aminotransferase class-V D0812_10830 PF00990 Diguanylate cyclase, GGDEF domain D0812_10830 PF17151 Periplasmic sensor domain D0812_10860 PF12792 CSS motif domain associated with EAL D0812_10860 PF00563 EAL domain D0812_10865 PF03466 LysR substrate binding domain D0812_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_10870 PF00291 Pyridoxal-phosphate dependent enzyme D0812_10875 PF00005 ABC transporter D0812_10875 PF00664 ABC transporter transmembrane region D0812_10880 PF00005 ABC transporter D0812_10880 PF00664 ABC transporter transmembrane region D0812_10885 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_10895 PF00266 Aminotransferase class-V D0812_10905 PF00990 Diguanylate cyclase, GGDEF domain D0812_10905 PF08448 PAS fold D0812_10910 PF00939 Sodium:sulfate symporter transmembrane region D0812_10915 PF02698 DUF218 domain D0812_10920 PF00390 Malic enzyme, N-terminal domain D0812_10920 PF03949 Malic enzyme, NAD binding domain D0812_10925 PF08482 ATP-dependent helicase C-terminal D0812_10925 PF04408 Helicase associated domain (HA2) D0812_10925 PF00270 DEAD/DEAH box helicase D0812_10925 PF00271 Helicase conserved C-terminal domain D0812_10930 PF02253 Phospholipase A1 D0812_10940 PF09423 PhoD-like phosphatase D0812_10940 PF16655 PhoD-like phosphatase, N-terminal domain D0812_10945 PF01259 SAICAR synthetase D0812_10950 PF01609 Transposase DDE domain D0812_10950 PF02281 Transposase Tn5 dimerisation domain D0812_10950 PF14706 Transposase DNA-binding D0812_10975 PF00691 OmpA family D0812_10975 PF05736 OprF membrane domain D0812_10990 PF13183 4Fe-4S dicluster domain D0812_10990 PF02913 FAD linked oxidases, C-terminal domain D0812_10990 PF01565 FAD binding domain D0812_11005 PF00221 Aromatic amino acid lyase D0812_11010 PF17392 Urocanase C-terminal domain D0812_11010 PF17391 Urocanase N-terminal domain D0812_11010 PF01175 Urocanase Rossmann-like domain D0812_11015 PF00491 Arginase family D0812_11020 PF01979 Amidohydrolase family D0812_11025 PF07702 UTRA domain D0812_11025 PF00392 Bacterial regulatory proteins, gntR family D0812_11040 PF02824 TGS domain D0812_11040 PF03129 Anticodon binding domain D0812_11040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0812_11040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0812_11045 PF05198 Translation initiation factor IF-3, N-terminal domain D0812_11045 PF00707 Translation initiation factor IF-3, C-terminal domain D0812_11050 PF01632 Ribosomal protein L35 D0812_11055 PF00453 Ribosomal protein L20 D0812_11070 PF01042 Endoribonuclease L-PSP D0812_11075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_11080 PF01906 Putative heavy-metal-binding D0812_11110 PF00990 Diguanylate cyclase, GGDEF domain D0812_11110 PF17155 Gammaproteobacterial periplasmic sensor domain D0812_11115 PF01409 tRNA synthetases class II core domain (F) D0812_11115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0812_11120 PF01588 Putative tRNA binding domain D0812_11120 PF03484 tRNA synthetase B5 domain D0812_11120 PF03147 Ferredoxin-fold anticodon binding domain D0812_11120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0812_11120 PF03483 B3/4 domain D0812_11130 PF08244 Glycosyl hydrolases family 32 C terminal D0812_11130 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0812_11135 PF00294 pfkB family carbohydrate kinase D0812_11140 PF00356 Bacterial regulatory proteins, lacI family D0812_11140 PF13407 Periplasmic binding protein domain D0812_11150 PF00216 Bacterial DNA-binding protein D0812_11160 PF05724 Thiopurine S-methyltransferase (TPMT) D0812_11165 PF02222 ATP-grasp domain D0812_11175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0812_11175 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D0812_11180 PF04172 LrgB-like family D0812_11185 PF03788 LrgA family D0812_11190 PF00929 Exonuclease D0812_11190 PF08411 Exonuclease C-terminal D0812_11205 PF13460 NAD(P)H-binding D0812_11210 PF01613 Flavin reductase like domain D0812_11215 PF02277 Phosphoribosyltransferase D0812_11220 PF02654 Cobalamin-5-phosphate synthase D0812_11225 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0812_11230 PF00300 Histidine phosphatase superfamily (branch 1) D0812_11240 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0812_11245 PF01032 FecCD transport family D0812_11250 PF00005 ABC transporter D0812_11270 PF07690 Major Facilitator Superfamily D0812_11275 PF03466 LysR substrate binding domain D0812_11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_11300 PF08334 Type II secretion system (T2SS), protein G D0812_11300 PF07963 Prokaryotic N-terminal methylation motif D0812_11305 PF01863 Protein of unknown function DUF45 D0812_11310 PF05971 RNA methyltransferase D0812_11315 PF00072 Response regulator receiver domain D0812_11315 PF00990 Diguanylate cyclase, GGDEF domain D0812_11325 PF07687 Peptidase dimerisation domain D0812_11325 PF01546 Peptidase family M20/M25/M40 D0812_11335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_11340 PF04209 homogentisate 1,2-dioxygenase D0812_11350 PF14497 Glutathione S-transferase, C-terminal domain D0812_11350 PF02798 Glutathione S-transferase, N-terminal domain D0812_11360 PF00934 PE family D0812_11360 PF07859 alpha/beta hydrolase fold D0812_11390 PF00072 Response regulator receiver domain D0812_11390 PF12431 Transcriptional regulator D0812_11395 PF17203 Single cache domain 3 D0812_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_11400 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0812_11405 PF02436 Conserved carboxylase domain D0812_11405 PF00682 HMGL-like D0812_11405 PF00364 Biotin-requiring enzyme D0812_11410 PF04277 Oxaloacetate decarboxylase, gamma chain D0812_11415 PF03390 2-hydroxycarboxylate transporter family D0812_11420 PF08218 Citrate lyase ligase C-terminal domain D0812_11425 PF06857 Malonate decarboxylase delta subunit (MdcD) D0812_11430 PF03328 HpcH/HpaI aldolase/citrate lyase family D0812_11435 PF04223 Citrate lyase, alpha subunit (CitF) D0812_11440 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase D0812_11445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D0812_11460 PF00072 Response regulator receiver domain D0812_11460 PF00196 Bacterial regulatory proteins, luxR family D0812_11475 PF00455 DeoR C terminal sensor domain D0812_11475 PF08220 DeoR-like helix-turn-helix domain D0812_11480 PF07690 Major Facilitator Superfamily D0812_11485 PF02952 L-fucose isomerase, C-terminal domain D0812_11485 PF07881 L-fucose isomerase, first N-terminal domain D0812_11485 PF07882 L-fucose isomerase, second N-terminal domain D0812_11490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0812_11490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0812_11495 PF05025 RbsD / FucU transport protein family D0812_11500 PF00596 Class II Aldolase and Adducin N-terminal domain D0812_11505 PF00465 Iron-containing alcohol dehydrogenase D0812_11520 PF00582 Universal stress protein family D0812_11525 PF13302 Acetyltransferase (GNAT) domain D0812_11525 PF13673 Acetyltransferase (GNAT) domain D0812_11525 PF03352 Methyladenine glycosylase D0812_11525 PF00958 GMP synthase C terminal domain D0812_11525 PF00117 Glutamine amidotransferase class-I D0812_11530 PF01966 HD domain D0812_11530 PF00072 Response regulator receiver domain D0812_11590 PF00072 Response regulator receiver domain D0812_11590 PF00486 Transcriptional regulatory protein, C terminal D0812_11605 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D0812_11610 PF12561 ToxR activated gene A lipoprotein domain D0812_11610 PF17945 Beta/Gamma crystallin D0812_11620 PF00924 Mechanosensitive ion channel D0812_11625 PF03729 Short repeat of unknown function (DUF308) D0812_11630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0812_11630 PF01411 tRNA synthetases class II (A) D0812_11645 PF01047 MarR family D0812_11675 PF01928 CYTH domain D0812_11685 PF09308 LuxQ, periplasmic D0812_11685 PF00512 His Kinase A (phospho-acceptor) domain D0812_11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_11685 PF00072 Response regulator receiver domain D0812_11690 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_11690 PF12464 Maltose acetyltransferase D0812_11710 PF00512 His Kinase A (phospho-acceptor) domain D0812_11710 PF00072 Response regulator receiver domain D0812_11710 PF00672 HAMP domain D0812_11710 PF01627 Hpt domain D0812_11710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0812_11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_11715 PF03707 Bacterial signalling protein N terminal repeat D0812_11715 PF00563 EAL domain D0812_11715 PF00990 Diguanylate cyclase, GGDEF domain D0812_11715 PF13188 PAS domain D0812_11740 PF13322 Domain of unknown function (DUF4092) D0812_11740 PF17291 N-terminal domain of M60-like peptidases D0812_11740 PF13402 Peptidase M60, enhancin and enhancin-like D0812_11750 PF02397 Bacterial sugar transferase D0812_11760 PF13439 Glycosyltransferase Family 4 D0812_11760 PF00534 Glycosyl transferases group 1 D0812_11770 PF00005 ABC transporter D0812_11770 PF00664 ABC transporter transmembrane region D0812_11800 PF00534 Glycosyl transferases group 1 D0812_11810 PF02954 Bacterial regulatory protein, Fis family D0812_11810 PF00072 Response regulator receiver domain D0812_11810 PF00158 Sigma-54 interaction domain D0812_11825 PF02563 Polysaccharide biosynthesis/export protein D0812_11825 PF10531 SLBB domain D0812_11830 PF00691 OmpA family D0812_11835 PF01740 STAS domain D0812_11840 PF14743 DNA ligase OB-like domain D0812_11840 PF01068 ATP dependent DNA ligase domain D0812_11850 PF01554 MatE D0812_11855 PF00677 Lumazine binding domain D0812_11870 PF01339 CheB methylesterase D0812_11870 PF00072 Response regulator receiver domain D0812_11875 PF00990 Diguanylate cyclase, GGDEF domain D0812_11875 PF05230 MASE2 domain D0812_11885 PF00877 NlpC/P60 family D0812_11890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_11890 PF00672 HAMP domain D0812_11890 PF02743 Cache domain D0812_11945 PF00480 ROK family D0812_11960 PF03454 MoeA C-terminal region (domain IV) D0812_11960 PF00994 Probable molybdopterin binding domain D0812_11960 PF03453 MoeA N-terminal region (domain I and II) D0812_11965 PF12804 MobA-like NTP transferase domain D0812_11970 PF08402 TOBE domain D0812_11970 PF00005 ABC transporter D0812_11975 PF00528 Binding-protein-dependent transport system inner membrane component D0812_11980 PF12849 PBP superfamily domain D0812_11985 PF00072 Response regulator receiver domain D0812_11985 PF02954 Bacterial regulatory protein, Fis family D0812_11985 PF00158 Sigma-54 interaction domain D0812_11990 PF00512 His Kinase A (phospho-acceptor) domain D0812_11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_12010 PF00005 ABC transporter D0812_12010 PF12848 ABC transporter D0812_12015 PF02634 FdhD/NarQ family D0812_12035 PF02613 Nitrate reductase delta subunit D0812_12045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_12045 PF01568 Molydopterin dinucleotide binding domain D0812_12045 PF00384 Molybdopterin oxidoreductase D0812_12050 PF13247 4Fe-4S dicluster domain D0812_12065 PF02146 Sir2 family D0812_12070 PF13416 Bacterial extracellular solute-binding protein D0812_12075 PF13416 Bacterial extracellular solute-binding protein D0812_12080 PF00528 Binding-protein-dependent transport system inner membrane component D0812_12085 PF00528 Binding-protein-dependent transport system inner membrane component D0812_12090 PF08402 TOBE domain D0812_12090 PF00005 ABC transporter D0812_12110 PF01171 PP-loop family D0812_12115 PF00582 Universal stress protein family D0812_12120 PF00027 Cyclic nucleotide-binding domain D0812_12120 PF13545 Crp-like helix-turn-helix domain D0812_12135 PF00403 Heavy-metal-associated domain D0812_12145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0812_12145 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D0812_12160 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0812_12175 PF09308 LuxQ, periplasmic D0812_12175 PF00072 Response regulator receiver domain D0812_12175 PF00512 His Kinase A (phospho-acceptor) domain D0812_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_12200 PF17414 MatP C-terminal ribbon-helix-helix domain D0812_12200 PF06303 MatP N-terminal domain D0812_12205 PF13654 AAA domain D0812_12205 PF05362 Lon protease (S16) C-terminal proteolytic domain D0812_12210 PF07977 FabA-like domain D0812_12215 PF04957 Ribosome modulation factor D0812_12235 PF01170 Putative RNA methylase family UPF0020 D0812_12235 PF10672 S-adenosylmethionine-dependent methyltransferase D0812_12235 PF02926 THUMP domain D0812_12240 PF07126 Cell-division protein ZapC D0812_12245 PF01180 Dihydroorotate dehydrogenase D0812_12250 PF05088 Bacterial NAD-glutamate dehydrogenase D0812_12260 PF11940 Domain of unknown function (DUF3458) Ig-like fold D0812_12260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D0812_12260 PF01433 Peptidase family M1 domain D0812_12270 PF11818 C-terminal domain of tail specific protease (DUF3340) D0812_12270 PF03572 Peptidase family S41 D0812_12270 PF17804 Tail specific protease N-terminal domain D0812_12270 PF00595 PDZ domain D0812_12275 PF17516 ProQ C-terminal domain D0812_12275 PF04352 ProQ/FINO family D0812_12280 PF13185 GAF domain D0812_12285 PF00664 ABC transporter transmembrane region D0812_12285 PF00005 ABC transporter D0812_12290 PF04403 Paraquat-inducible protein A D0812_12295 PF02470 MlaD protein D0812_12300 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D0812_12300 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D0812_12300 PF01189 16S rRNA methyltransferase RsmB/F D0812_12320 PF00793 DAHP synthetase I family D0812_12325 PF04461 Protein of unknown function (DUF520) D0812_12330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_12330 PF10414 Sirohaem synthase dimerisation region D0812_12330 PF14824 Sirohaem biosynthesis protein central D0812_12340 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_12345 PF00528 Binding-protein-dependent transport system inner membrane component D0812_12350 PF00528 Binding-protein-dependent transport system inner membrane component D0812_12355 PF00005 ABC transporter D0812_12360 PF01027 Inhibitor of apoptosis-promoting Bax1 D0812_12370 PF04358 DsrC like protein D0812_12375 PF00708 Acylphosphatase D0812_12380 PF02743 Cache domain D0812_12380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_12380 PF00672 HAMP domain D0812_12385 PF17785 PUA-like domain D0812_12385 PF10672 S-adenosylmethionine-dependent methyltransferase D0812_12400 PF02412 Thrombospondin type 3 repeat D0812_12400 PF03422 Carbohydrate binding module (family 6) D0812_12415 PF05736 OprF membrane domain D0812_12415 PF00691 OmpA family D0812_12425 PF17158 Membrane-associated sensor, integral membrane domain D0812_12425 PF00990 Diguanylate cyclase, GGDEF domain D0812_12430 PF06508 Queuosine biosynthesis protein QueC D0812_12435 PF04055 Radical SAM superfamily D0812_12450 PF00089 Trypsin D0812_12460 PF16177 Acetyl-coenzyme A synthetase N-terminus D0812_12460 PF00501 AMP-binding enzyme D0812_12460 PF13193 AMP-binding enzyme C-terminal domain D0812_12465 PF04303 PrpF protein D0812_12470 PF00694 Aconitase C-terminal domain D0812_12470 PF00330 Aconitase family (aconitate hydratase) D0812_12475 PF00285 Citrate synthase, C-terminal domain D0812_12495 PF04717 Type VI secretion system, phage-baseplate injector D0812_12495 PF16671 Actin cross-linking domain D0812_12550 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_12550 PF07724 AAA domain (Cdc48 subfamily) D0812_12550 PF00004 ATPase family associated with various cellular activities (AAA) D0812_12550 PF17871 AAA lid domain D0812_12585 PF00069 Protein kinase domain D0812_12585 PF03793 PASTA domain D0812_12625 PF01970 Tripartite tricarboxylate transporter TctA family D0812_12630 PF01925 Sulfite exporter TauE/SafE D0812_12635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_12635 PF02743 Cache domain D0812_12635 PF00672 HAMP domain D0812_12640 PF16868 NMT1-like family D0812_12645 PF00873 AcrB/AcrD/AcrF family D0812_12650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_12650 PF00529 HlyD membrane-fusion protein of T1SS D0812_12655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_12660 PF00171 Aldehyde dehydrogenase family D0812_12665 PF00158 Sigma-54 interaction domain D0812_12665 PF01590 GAF domain D0812_12665 PF02954 Bacterial regulatory protein, Fis family D0812_12695 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0812_12695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0812_12700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0812_12705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0812_12705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0812_12710 PF12431 Transcriptional regulator D0812_12710 PF00072 Response regulator receiver domain D0812_12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_12715 PF00989 PAS fold D0812_12715 PF17203 Single cache domain 3 D0812_12715 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0812_12720 PF00155 Aminotransferase class I and II D0812_12750 PF01555 DNA methylase D0812_12840 PF02810 SEC-C motif D0812_12865 PF04245 37-kD nucleoid-associated bacterial protein D0812_12895 PF09077 Mu B transposition protein, C terminal D0812_12895 PF13401 AAA domain D0812_12905 PF13693 Winged helix-turn-helix DNA-binding D0812_12920 PF03466 LysR substrate binding domain D0812_12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_12925 PF13406 Transglycosylase SLT domain D0812_12930 PF05166 YcgL domain D0812_12935 PF03775 Septum formation inhibitor MinC, C-terminal domain D0812_12935 PF05209 Septum formation inhibitor MinC, N-terminal domain D0812_12940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0812_12945 PF03776 Septum formation topological specificity factor MinE D0812_12950 PF00570 HRDC domain D0812_12950 PF01612 3'-5' exonuclease D0812_12955 PF13193 AMP-binding enzyme C-terminal domain D0812_12955 PF00501 AMP-binding enzyme D0812_12960 PF12697 Alpha/beta hydrolase family D0812_12965 PF03843 Outer membrane lipoprotein Slp family D0812_12975 PF00814 Glycoprotease family D0812_12980 PF13307 Helicase C-terminal domain D0812_12980 PF04851 Type III restriction enzyme, res subunit D0812_12985 PF00551 Formyl transferase D0812_12985 PF01842 ACT domain D0812_12990 PF06185 YecM protein D0812_13000 PF00750 tRNA synthetases class I (R) D0812_13000 PF03485 Arginyl tRNA synthetase N terminal domain D0812_13000 PF05746 DALR anticodon binding domain D0812_13015 PF07664 Ferrous iron transport protein B C terminus D0812_13015 PF07670 Nucleoside recognition D0812_13015 PF02421 Ferrous iron transport protein B D0812_13015 PF17910 FeoB cytosolic helical domain D0812_13020 PF04023 FeoA domain D0812_13025 PF02311 AraC-like ligand binding domain D0812_13025 PF12833 Helix-turn-helix domain D0812_13030 PF01297 Zinc-uptake complex component A periplasmic D0812_13035 PF00005 ABC transporter D0812_13040 PF00950 ABC 3 transport family D0812_13045 PF02629 CoA binding domain D0812_13045 PF00549 CoA-ligase D0812_13050 PF00549 CoA-ligase D0812_13050 PF08442 ATP-grasp domain D0812_13055 PF02817 e3 binding domain D0812_13055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0812_13055 PF00364 Biotin-requiring enzyme D0812_13060 PF02779 Transketolase, pyrimidine binding domain D0812_13060 PF16870 2-oxoglutarate dehydrogenase C-terminal D0812_13060 PF00676 Dehydrogenase E1 component D0812_13060 PF16078 2-oxoglutarate dehydrogenase N-terminus D0812_13065 PF13085 2Fe-2S iron-sulfur cluster binding domain D0812_13070 PF02910 Fumarate reductase flavoprotein C-term D0812_13070 PF00890 FAD binding domain D0812_13075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0812_13080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0812_13085 PF00285 Citrate synthase, C-terminal domain D0812_13090 PF01784 NIF3 (NGG1p interacting factor 3) D0812_13100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0812_13100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0812_13100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0812_13100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0812_13110 PF00561 alpha/beta hydrolase fold D0812_13120 PF00258 Flavodoxin D0812_13130 PF01475 Ferric uptake regulator family D0812_13140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0812_13140 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0812_13145 PF00367 phosphotransferase system, EIIB D0812_13145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0812_13145 PF02378 Phosphotransferase system, EIIC D0812_13155 PF01979 Amidohydrolase family D0812_13160 PF01047 MarR family D0812_13160 PF00480 ROK family D0812_13165 PF00999 Sodium/hydrogen exchanger family D0812_13165 PF02254 TrkA-N domain D0812_13170 PF13537 Glutamine amidotransferase domain D0812_13170 PF00733 Asparagine synthase D0812_13175 PF02357 Transcription termination factor nusG D0812_13180 PF00854 POT family D0812_13185 PF00762 Ferrochelatase D0812_13190 PF05191 Adenylate kinase, active site lid D0812_13195 PF00183 Hsp90 protein D0812_13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_13200 PF00486 Transcriptional regulatory protein, C terminal D0812_13205 PF17323 Trans-membrane regulatory protein ToxS D0812_13220 PF12850 Calcineurin-like phosphoesterase superfamily domain D0812_13240 PF07556 Protein of unknown function (DUF1538) D0812_13245 PF07556 Protein of unknown function (DUF1538) D0812_13250 PF01370 NAD dependent epimerase/dehydratase family D0812_13250 PF08338 Domain of unknown function (DUF1731) D0812_13255 PF00106 short chain dehydrogenase D0812_13265 PF00085 Thioredoxin D0812_13275 PF01270 Glycosyl hydrolases family 8 D0812_13280 PF03170 Bacterial cellulose synthase subunit D0812_13285 PF00535 Glycosyl transferase family 2 D0812_13285 PF07238 PilZ domain D0812_13285 PF03552 Cellulose synthase D0812_13290 PF06564 Cellulose biosynthesis protein BcsQ D0812_13305 PF11658 Cellulose biosynthesis protein BcsG D0812_13310 PF16200 C-terminal region of band_7 D0812_13310 PF01145 SPFH domain / Band 7 family D0812_13340 PF03120 NAD-dependent DNA ligase OB-fold domain D0812_13340 PF12826 Helix-hairpin-helix motif D0812_13340 PF00533 BRCA1 C Terminus (BRCT) domain D0812_13340 PF01653 NAD-dependent DNA ligase adenylation domain D0812_13340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0812_13345 PF04354 ZipA, C-terminal FtsZ-binding domain D0812_13355 PF00291 Pyridoxal-phosphate dependent enzyme D0812_13365 PF00381 PTS HPr component phosphorylation site D0812_13370 PF02896 PEP-utilising enzyme, TIM barrel domain D0812_13370 PF00391 PEP-utilising enzyme, mobile domain D0812_13370 PF05524 PEP-utilising enzyme, N-terminal D0812_13375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0812_13380 PF00700 Bacterial flagellin C-terminal helical region D0812_13380 PF07196 Flagellin hook IN motif D0812_13380 PF00669 Bacterial flagellin N-terminal helical region D0812_13385 PF00669 Bacterial flagellin N-terminal helical region D0812_13385 PF07196 Flagellin hook IN motif D0812_13385 PF00700 Bacterial flagellin C-terminal helical region D0812_13390 PF00669 Bacterial flagellin N-terminal helical region D0812_13390 PF00700 Bacterial flagellin C-terminal helical region D0812_13390 PF07196 Flagellin hook IN motif D0812_13400 PF07196 Flagellin hook IN motif D0812_13400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_13405 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0812_13405 PF10135 Rod binding protein D0812_13410 PF02119 Flagellar P-ring protein D0812_13415 PF02107 Flagellar L-ring protein D0812_13420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_13420 PF00460 Flagella basal body rod protein D0812_13425 PF00460 Flagella basal body rod protein D0812_13425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_13430 PF07559 Flagellar basal body protein FlaE D0812_13430 PF00460 Flagella basal body rod protein D0812_13430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_13435 PF13861 FlgD Tudor-like domain D0812_13435 PF13860 FlgD Ig-like domain D0812_13435 PF03963 Flagellar hook capping protein - N-terminal region D0812_13440 PF00460 Flagella basal body rod protein D0812_13440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_13445 PF00460 Flagella basal body rod protein D0812_13450 PF03705 CheR methyltransferase, all-alpha domain D0812_13450 PF01739 CheR methyltransferase, SAM binding domain D0812_13455 PF01584 CheW-like domain D0812_13455 PF00072 Response regulator receiver domain D0812_13500 PF01389 OmpA-like transmembrane domain D0812_13500 PF00691 OmpA family D0812_13505 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0812_13510 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0812_13515 PF13609 Gram-negative porin D0812_13525 PF00403 Heavy-metal-associated domain D0812_13540 PF00728 Glycosyl hydrolase family 20, catalytic domain D0812_13540 PF03173 Putative carbohydrate binding domain D0812_13540 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D0812_13540 PF02838 Glycosyl hydrolase family 20, domain 2 D0812_13560 PF01713 Smr domain D0812_13565 PF01479 S4 domain D0812_13565 PF00849 RNA pseudouridylate synthase D0812_13570 PF04073 Aminoacyl-tRNA editing domain D0812_13575 PF02872 5'-nucleotidase, C-terminal domain D0812_13575 PF00149 Calcineurin-like phosphoesterase D0812_13580 PF00793 DAHP synthetase I family D0812_13585 PF13369 Transglutaminase-like superfamily D0812_13590 PF04247 Invasion gene expression up-regulator, SirB D0812_13595 PF17827 PrmC N-terminal domain D0812_13595 PF13847 Methyltransferase domain D0812_13600 PF03462 PCRF domain D0812_13600 PF00472 RF-1 domain D0812_13605 PF01488 Shikimate / quinate 5-dehydrogenase D0812_13605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0812_13605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0812_13610 PF03550 Outer membrane lipoprotein LolB D0812_13615 PF00288 GHMP kinases N terminal domain D0812_13615 PF08544 GHMP kinases C terminal D0812_13620 PF14572 Phosphoribosyl synthetase-associated domain D0812_13620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0812_13625 PF01195 Peptidyl-tRNA hydrolase D0812_13630 PF06071 Protein of unknown function (DUF933) D0812_13630 PF01926 50S ribosome-binding GTPase D0812_13740 PF01494 FAD binding domain D0812_13750 PF00919 Uncharacterized protein family UPF0004 D0812_13750 PF04055 Radical SAM superfamily D0812_13750 PF01938 TRAM domain D0812_13755 PF02562 PhoH-like protein D0812_13760 PF02130 Uncharacterized protein family UPF0054 D0812_13765 PF00571 CBS domain D0812_13765 PF03471 Transporter associated domain D0812_13770 PF00795 Carbon-nitrogen hydrolase D0812_13775 PF07295 Zinc-ribbon containing domain D0812_13780 PF00133 tRNA synthetases class I (I, L, M and V) D0812_13780 PF08264 Anticodon-binding domain of tRNA D0812_13780 PF13603 Leucyl-tRNA synthetase, Domain 2 D0812_13785 PF04390 Lipopolysaccharide-assembly D0812_13790 PF06144 DNA polymerase III, delta subunit D0812_13790 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0812_13800 PF02590 Predicted SPOUT methyltransferase D0812_13805 PF00905 Penicillin binding protein transpeptidase domain D0812_13805 PF03717 Penicillin-binding Protein dimerisation domain D0812_13810 PF01098 Cell cycle protein D0812_13815 PF03330 Lytic transglycolase D0812_13815 PF05036 Sporulation related domain D0812_13820 PF00768 D-alanyl-D-alanine carboxypeptidase D0812_13820 PF07943 Penicillin-binding protein 5, C-terminal domain D0812_13825 PF04359 Protein of unknown function (DUF493) D0812_13830 PF03099 Biotin/lipoate A/B protein ligase family D0812_13835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0812_13835 PF04055 Radical SAM superfamily D0812_13840 PF00464 Serine hydroxymethyltransferase D0812_13845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D0812_13845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0812_13860 PF16657 Maltogenic Amylase, C-terminal domain D0812_13860 PF00128 Alpha amylase, catalytic domain D0812_13865 PF02378 Phosphotransferase system, EIIC D0812_13865 PF00367 phosphotransferase system, EIIB D0812_13870 PF00356 Bacterial regulatory proteins, lacI family D0812_13880 PF00005 ABC transporter D0812_13880 PF09383 NIL domain D0812_13885 PF00528 Binding-protein-dependent transport system inner membrane component D0812_13890 PF03180 NLPA lipoprotein D0812_13900 PF02872 5'-nucleotidase, C-terminal domain D0812_13900 PF00149 Calcineurin-like phosphoesterase D0812_13905 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D0812_13910 PF07348 Syd protein (SUKH-2) D0812_13915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0812_13915 PF14489 QueF-like protein D0812_13925 PF00072 Response regulator receiver domain D0812_13925 PF00990 Diguanylate cyclase, GGDEF domain D0812_13930 PF03641 Possible lysine decarboxylase D0812_13930 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0812_13930 PF11892 Domain of unknown function (DUF3412) D0812_13935 PF01367 5'-3' exonuclease, C-terminal SAM fold D0812_13935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0812_13940 PF01728 FtsJ-like methyltransferase D0812_13940 PF18125 RlmM ferredoxin-like domain D0812_13945 PF04241 Protein of unknown function (DUF423) D0812_13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_13955 PF03466 LysR substrate binding domain D0812_13960 PF02926 THUMP domain D0812_13960 PF02568 Thiamine biosynthesis protein (ThiI) D0812_13965 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0812_13965 PF00691 OmpA family D0812_13965 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0812_13965 PF00691 OmpA family D0812_13970 PF01618 MotA/TolQ/ExbB proton channel family D0812_13975 PF02609 Exonuclease VII small subunit D0812_13980 PF00348 Polyprenyl synthetase D0812_13985 PF02780 Transketolase, C-terminal domain D0812_13985 PF02779 Transketolase, pyrimidine binding domain D0812_13985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0812_13990 PF04608 Phosphatidylglycerophosphatase A D0812_13995 PF02769 AIR synthase related protein, C-terminal domain D0812_13995 PF00586 AIR synthase related protein, N-terminal domain D0812_14000 PF01029 NusB family D0812_14005 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0812_14010 PF00925 GTP cyclohydrolase II D0812_14010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0812_14015 PF00677 Lumazine binding domain D0812_14020 PF01872 RibD C-terminal domain D0812_14020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0812_14025 PF03477 ATP cone domain D0812_14030 PF00171 Aldehyde dehydrogenase family D0812_14035 PF00696 Amino acid kinase family D0812_14035 PF01472 PUA domain D0812_14040 PF07417 Sigma factor-binding transcriptional regulator Crl D0812_14050 PF00156 Phosphoribosyl transferase domain D0812_14055 PF00860 Permease family D0812_14060 PF07687 Peptidase dimerisation domain D0812_14060 PF01546 Peptidase family M20/M25/M40 D0812_14075 PF07715 TonB-dependent Receptor Plug Domain D0812_14075 PF00593 TonB dependent receptor D0812_14095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D0812_14095 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D0812_14095 PF02769 AIR synthase related protein, C-terminal domain D0812_14100 PF01464 Transglycosylase SLT domain D0812_14100 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_14110 PF14437 MafB19-like deaminase D0812_14120 PF03806 AbgT putative transporter family D0812_14140 PF07963 Prokaryotic N-terminal methylation motif D0812_14140 PF00114 Pilin (bacterial filament) D0812_14145 PF00114 Pilin (bacterial filament) D0812_14145 PF07963 Prokaryotic N-terminal methylation motif D0812_14150 PF01556 DnaJ C terminal domain D0812_14150 PF00226 DnaJ domain D0812_14150 PF00684 DnaJ central domain D0812_14155 PF00012 Hsp70 protein D0812_14165 PF00375 Sodium:dicarboxylate symporter family D0812_14170 PF01025 GrpE D0812_14175 PF01513 ATP-NAD kinase D0812_14185 PF02463 RecF/RecN/SMC N terminal domain D0812_14190 PF00583 Acetyltransferase (GNAT) family D0812_14195 PF04355 SmpA / OmlA family D0812_14205 PF03658 RnfH family Ubiquitin D0812_14210 PF03364 Polyketide cyclase / dehydrase and lipid transport D0812_14215 PF01668 SmpB protein D0812_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_14225 PF03466 LysR substrate binding domain D0812_14230 PF12805 FUSC-like inner membrane protein yccS D0812_14250 PF00202 Aminotransferase class-III D0812_14255 PF01053 Cys/Met metabolism PLP-dependent enzyme D0812_14260 PF00924 Mechanosensitive ion channel D0812_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_14275 PF03466 LysR substrate binding domain D0812_14280 PF01266 FAD dependent oxidoreductase D0812_14285 PF01235 Sodium:alanine symporter family D0812_14290 PF01184 GPR1/FUN34/yaaH family D0812_14295 PF06483 Chitinase C D0812_14295 PF00704 Glycosyl hydrolases family 18 D0812_14300 PF03553 Na+/H+ antiporter family D0812_14305 PF00117 Glutamine amidotransferase class-I D0812_14305 PF02540 NAD synthase D0812_14305 PF00958 GMP synthase C terminal domain D0812_14310 PF00478 IMP dehydrogenase / GMP reductase domain D0812_14310 PF00571 CBS domain D0812_14315 PF02601 Exonuclease VII, large subunit D0812_14315 PF13742 OB-fold nucleic acid binding domain D0812_14325 PF13185 GAF domain D0812_14325 PF00990 Diguanylate cyclase, GGDEF domain D0812_14335 PF01926 50S ribosome-binding GTPase D0812_14335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0812_14340 PF13360 PQQ-like domain D0812_14345 PF09976 Tetratricopeptide repeat-like domain D0812_14350 PF13393 Histidyl-tRNA synthetase D0812_14350 PF03129 Anticodon binding domain D0812_14355 PF04551 GcpE protein D0812_14360 PF13464 Domain of unknown function (DUF4115) D0812_14365 PF04055 Radical SAM superfamily D0812_14370 PF00334 Nucleoside diphosphate kinase D0812_14375 PF00883 Cytosol aminopeptidase family, catalytic domain D0812_14375 PF12404 Peptidase D0812_14380 PF04384 Iron-sulphur cluster assembly D0812_14385 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_14390 PF00012 Hsp70 protein D0812_14395 PF07743 HSCB C-terminal oligomerisation domain D0812_14395 PF00226 DnaJ domain D0812_14400 PF01521 Iron-sulphur cluster biosynthesis D0812_14405 PF01592 NifU-like N terminal domain D0812_14410 PF00266 Aminotransferase class-V D0812_14415 PF02082 Transcriptional regulator D0812_14420 PF00588 SpoU rRNA Methylase family D0812_14430 PF00459 Inositol monophosphatase family D0812_14435 PF07549 SecD/SecF GG Motif D0812_14435 PF02355 Protein export membrane protein D0812_14440 PF07549 SecD/SecF GG Motif D0812_14440 PF02355 Protein export membrane protein D0812_14440 PF13721 SecD export protein N-terminal TM region D0812_14445 PF02699 Preprotein translocase subunit D0812_14450 PF01702 Queuine tRNA-ribosyltransferase D0812_14455 PF02547 Queuosine biosynthesis protein D0812_14470 PF00571 CBS domain D0812_14475 PF00463 Isocitrate lyase family D0812_14480 PF01274 Malate synthase D0812_14485 PF03466 LysR substrate binding domain D0812_14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_14490 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0812_14490 PF00578 AhpC/TSA family D0812_14495 PF03932 CutC family D0812_14500 PF03976 Polyphosphate kinase 2 (PPK2) D0812_14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_14505 PF03466 LysR substrate binding domain D0812_14520 PF01895 PhoU domain D0812_14525 PF00005 ABC transporter D0812_14530 PF00528 Binding-protein-dependent transport system inner membrane component D0812_14535 PF00528 Binding-protein-dependent transport system inner membrane component D0812_14540 PF02503 Polyphosphate kinase middle domain D0812_14540 PF13089 Polyphosphate kinase N-terminal domain D0812_14540 PF17941 Polyphosphate kinase C-terminal domain 1 D0812_14540 PF13090 Polyphosphate kinase C-terminal domain 2 D0812_14545 PF02541 Ppx/GppA phosphatase family D0812_14550 PF12849 PBP superfamily domain D0812_14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_14555 PF00512 His Kinase A (phospho-acceptor) domain D0812_14555 PF00989 PAS fold D0812_14555 PF11808 Phosphate regulon sensor protein PhoR D0812_14560 PF00486 Transcriptional regulatory protein, C terminal D0812_14560 PF00072 Response regulator receiver domain D0812_14565 PF04381 Putative exonuclease, RdgC D0812_14575 PF00037 4Fe-4S binding domain D0812_14585 PF03411 Penicillin-insensitive murein endopeptidase D0812_14635 PF00004 ATPase family associated with various cellular activities (AAA) D0812_14635 PF17871 AAA lid domain D0812_14635 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_14635 PF02861 Clp amino terminal domain, pathogenicity island component D0812_14635 PF07724 AAA domain (Cdc48 subfamily) D0812_14645 PF00849 RNA pseudouridylate synthase D0812_14645 PF01479 S4 domain D0812_14650 PF13525 Outer membrane lipoprotein D0812_14655 PF01464 Transglycosylase SLT domain D0812_14660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0812_14665 PF01817 Chorismate mutase type II D0812_14665 PF00800 Prephenate dehydratase D0812_14670 PF01931 Protein of unknown function DUF84 D0812_14675 PF01371 Trp repressor protein D0812_14680 PF14718 Soluble lytic murein transglycosylase L domain D0812_14680 PF01464 Transglycosylase SLT domain D0812_14685 PF00005 ABC transporter D0812_14685 PF12848 ABC transporter D0812_14690 PF07238 PilZ domain D0812_14695 PF01551 Peptidase family M23 D0812_14695 PF04225 Opacity-associated protein A LysM-like domain D0812_14700 PF01817 Chorismate mutase type II D0812_14700 PF02153 Prephenate dehydrogenase D0812_14705 PF00793 DAHP synthetase I family D0812_14710 PF00933 Glycosyl hydrolase family 3 N terminal domain D0812_14715 PF03702 Anhydro-N-acetylmuramic acid kinase D0812_14720 PF01380 SIS domain D0812_14735 PF02554 Carbon starvation protein CstA D0812_14740 PF06580 Histidine kinase D0812_14740 PF07694 5TMR of 5TMR-LYT D0812_14745 PF00072 Response regulator receiver domain D0812_14745 PF04397 LytTr DNA-binding domain D0812_14750 PF02401 LytB protein D0812_14755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_14760 PF01252 Signal peptidase (SPase) II D0812_14765 PF00133 tRNA synthetases class I (I, L, M and V) D0812_14765 PF08264 Anticodon-binding domain of tRNA D0812_14765 PF06827 Zinc finger found in FPG and IleRS D0812_14770 PF06574 FAD synthetase D0812_14770 PF01687 Riboflavin kinase D0812_14775 PF03023 Lipid II flippase MurJ D0812_14780 PF01649 Ribosomal protein S20 D0812_14785 PF01022 Bacterial regulatory protein, arsR family D0812_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_14790 PF03466 LysR substrate binding domain D0812_14795 PF02690 Na+/Pi-cotransporter D0812_14805 PF00303 Thymidylate synthase D0812_14810 PF01790 Prolipoprotein diacylglyceryl transferase D0812_14815 PF01925 Sulfite exporter TauE/SafE D0812_14820 PF01590 GAF domain D0812_14820 PF05524 PEP-utilising enzyme, N-terminal D0812_14820 PF00391 PEP-utilising enzyme, mobile domain D0812_14820 PF02896 PEP-utilising enzyme, TIM barrel domain D0812_14825 PF00293 NUDIX domain D0812_14830 PF02976 DNA mismatch repair enzyme MutH D0812_14840 PF00248 Aldo/keto reductase family D0812_14850 PF02954 Bacterial regulatory protein, Fis family D0812_14850 PF00072 Response regulator receiver domain D0812_14850 PF00158 Sigma-54 interaction domain D0812_14855 PF00152 tRNA synthetases class II (D, K and N) D0812_14855 PF01336 OB-fold nucleic acid binding domain D0812_14865 PF01368 DHH family D0812_14865 PF02272 DHHA1 domain D0812_14865 PF17768 RecJ OB domain D0812_14870 PF10411 Disulfide bond isomerase protein N-terminus D0812_14870 PF13098 Thioredoxin-like domain D0812_14875 PF02899 Phage integrase, N-terminal SAM-like domain D0812_14875 PF00589 Phage integrase family D0812_14880 PF00258 Flavodoxin D0812_14885 PF05525 Branched-chain amino acid transport protein D0812_14890 PF05175 Methyltransferase small domain D0812_14895 PF00271 Helicase conserved C-terminal domain D0812_14895 PF00270 DEAD/DEAH box helicase D0812_14905 PF03883 Peroxide stress protein YaaA D0812_14910 PF01235 Sodium:alanine symporter family D0812_14925 PF03167 Uracil DNA glycosylase superfamily D0812_14935 PF01261 Xylose isomerase-like TIM barrel D0812_14940 PF01228 Glycine radical D0812_14950 PF00291 Pyridoxal-phosphate dependent enzyme D0812_14950 PF14821 Threonine synthase N terminus D0812_14955 PF08544 GHMP kinases C terminal D0812_14955 PF00288 GHMP kinases N terminal domain D0812_14960 PF01842 ACT domain D0812_14960 PF00696 Amino acid kinase family D0812_14960 PF13840 ACT domain D0812_14960 PF00742 Homoserine dehydrogenase D0812_14960 PF03447 Homoserine dehydrogenase, NAD binding domain D0812_14970 PF03737 Aldolase/RraA D0812_14985 PF00486 Transcriptional regulatory protein, C terminal D0812_14985 PF00072 Response regulator receiver domain D0812_14995 PF00989 PAS fold D0812_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_14995 PF00072 Response regulator receiver domain D0812_14995 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0812_14995 PF00512 His Kinase A (phospho-acceptor) domain D0812_14995 PF01627 Hpt domain D0812_15000 PF00990 Diguanylate cyclase, GGDEF domain D0812_15000 PF01590 GAF domain D0812_15000 PF00360 Phytochrome region D0812_15000 PF00563 EAL domain D0812_15005 PF04055 Radical SAM superfamily D0812_15005 PF16199 Radical_SAM C-terminal domain D0812_15010 PF01645 Conserved region in glutamate synthase D0812_15010 PF01493 GXGXG motif D0812_15010 PF04898 Glutamate synthase central domain D0812_15010 PF00310 Glutamine amidotransferases class-II D0812_15015 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_15015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0812_15020 PF01645 Conserved region in glutamate synthase D0812_15020 PF01493 GXGXG motif D0812_15020 PF00310 Glutamine amidotransferases class-II D0812_15020 PF04898 Glutamate synthase central domain D0812_15025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0812_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_15035 PF01048 Phosphorylase superfamily D0812_15045 PF01497 Periplasmic binding protein D0812_15050 PF03458 UPF0126 domain D0812_15055 PF03466 LysR substrate binding domain D0812_15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_15060 PF01925 Sulfite exporter TauE/SafE D0812_15075 PF02142 MGS-like domain D0812_15075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0812_15075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0812_15080 PF00117 Glutamine amidotransferase class-I D0812_15080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0812_15085 PF05173 Dihydrodipicolinate reductase, C-terminus D0812_15085 PF01113 Dihydrodipicolinate reductase, N-terminus D0812_15090 PF00293 NUDIX domain D0812_15095 PF01043 SecA preprotein cross-linking domain D0812_15095 PF07517 SecA DEAD-like domain D0812_15095 PF02810 SEC-C motif D0812_15095 PF07516 SecA Wing and Scaffold domain D0812_15105 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0812_15110 PF00091 Tubulin/FtsZ family, GTPase domain D0812_15110 PF12327 FtsZ family, C-terminal domain D0812_15115 PF02491 SHS2 domain inserted in FTSA D0812_15120 PF03799 Cell division protein FtsQ D0812_15120 PF08478 POTRA domain, FtsQ-type D0812_15125 PF01225 Mur ligase family, catalytic domain D0812_15125 PF02875 Mur ligase family, glutamate ligase domain D0812_15125 PF08245 Mur ligase middle domain D0812_15130 PF03033 Glycosyltransferase family 28 N-terminal domain D0812_15130 PF04101 Glycosyltransferase family 28 C-terminal domain D0812_15135 PF01098 Cell cycle protein D0812_15140 PF02875 Mur ligase family, glutamate ligase domain D0812_15140 PF08245 Mur ligase middle domain D0812_15145 PF00953 Glycosyl transferase family 4 D0812_15145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0812_15150 PF01225 Mur ligase family, catalytic domain D0812_15150 PF08245 Mur ligase middle domain D0812_15150 PF02875 Mur ligase family, glutamate ligase domain D0812_15155 PF02875 Mur ligase family, glutamate ligase domain D0812_15155 PF01225 Mur ligase family, catalytic domain D0812_15155 PF08245 Mur ligase middle domain D0812_15160 PF03717 Penicillin-binding Protein dimerisation domain D0812_15160 PF00905 Penicillin binding protein transpeptidase domain D0812_15165 PF04999 Cell division protein FtsL D0812_15170 PF01795 MraW methylase family D0812_15185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_15190 PF04348 LppC putative lipoprotein D0812_15195 PF02021 Uncharacterised protein family UPF0102 D0812_15200 PF13580 SIS domain D0812_15205 PF04972 BON domain D0812_15210 PF04386 Stringent starvation protein B D0812_15215 PF02798 Glutathione S-transferase, N-terminal domain D0812_15215 PF00043 Glutathione S-transferase, C-terminal domain D0812_15220 PF02167 Cytochrome C1 family D0812_15225 PF00032 Cytochrome b(C-terminal)/b6/petD D0812_15225 PF00033 Cytochrome b/b6/petB D0812_15230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D0812_15230 PF00355 Rieske [2Fe-2S] domain D0812_15235 PF00380 Ribosomal protein S9/S16 D0812_15240 PF00572 Ribosomal protein L13 D0812_15250 PF03969 AFG1-like ATPase D0812_15260 PF06295 Protein of unknown function (DUF1043) D0812_15265 PF00595 PDZ domain D0812_15270 PF13180 PDZ domain D0812_15275 PF00521 DNA gyrase/topoisomerase IV, subunit A D0812_15275 PF03989 DNA gyrase C-terminal domain, beta-propeller D0812_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_15280 PF00986 DNA gyrase B subunit, carboxyl terminus D0812_15280 PF00204 DNA gyrase B D0812_15280 PF01751 Toprim domain D0812_15285 PF05728 Uncharacterised protein family (UPF0227) D0812_15290 PF00149 Calcineurin-like phosphoesterase D0812_15295 PF06853 Protein of unknown function (DUF1249) D0812_15300 PF00293 NUDIX domain D0812_15305 PF02321 Outer membrane efflux protein D0812_15310 PF01467 Cytidylyltransferase-like D0812_15310 PF00294 pfkB family carbohydrate kinase D0812_15315 PF08335 GlnD PII-uridylyltransferase D0812_15315 PF03710 Glutamate-ammonia ligase adenylyltransferase D0812_15320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_15320 PF02743 Cache domain D0812_15320 PF00672 HAMP domain D0812_15325 PF07885 Ion channel D0812_15330 PF01928 CYTH domain D0812_15335 PF01865 Protein of unknown function DUF47 D0812_15340 PF01384 Phosphate transporter family D0812_15345 PF08239 Bacterial SH3 domain D0812_15365 PF13401 AAA domain D0812_15365 PF01471 Putative peptidoglycan binding domain D0812_15370 PF12627 Probable RNA and SrmB- binding site of polymerase A D0812_15370 PF01743 Poly A polymerase head domain D0812_15370 PF01966 HD domain D0812_15375 PF02673 Bacitracin resistance protein BacA D0812_15380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0812_15385 PF02152 Dihydroneopterin aldolase D0812_15390 PF02660 Glycerol-3-phosphate acyltransferase D0812_15395 PF00561 alpha/beta hydrolase fold D0812_15400 PF00814 Glycoprotease family D0812_15405 PF01165 Ribosomal protein S21 D0812_15410 PF09424 Yqey-like protein D0812_15415 PF10410 DnaB-helicase binding domain of primase D0812_15415 PF08278 DNA primase DnaG DnaB-binding D0812_15415 PF01807 CHC2 zinc finger D0812_15415 PF08275 DNA primase catalytic core, N-terminal domain D0812_15420 PF04545 Sigma-70, region 4 D0812_15420 PF04542 Sigma-70 region 2 D0812_15420 PF04539 Sigma-70 region 3 D0812_15420 PF04546 Sigma-70, non-essential region D0812_15420 PF03979 Sigma-70 factor, region 1.1 D0812_15420 PF00140 Sigma-70 factor, region 1.2 D0812_15450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_15450 PF02378 Phosphotransferase system, EIIC D0812_15450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_15455 PF08125 Mannitol dehydrogenase C-terminal domain D0812_15455 PF01232 Mannitol dehydrogenase Rossmann domain D0812_15460 PF05068 Mannitol repressor D0812_15465 PF13419 Haloacid dehalogenase-like hydrolase D0812_15470 PF00512 His Kinase A (phospho-acceptor) domain D0812_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_15470 PF00672 HAMP domain D0812_15475 PF00486 Transcriptional regulatory protein, C terminal D0812_15475 PF00072 Response regulator receiver domain D0812_15490 PF01380 SIS domain D0812_15495 PF00455 DeoR C terminal sensor domain D0812_15495 PF08220 DeoR-like helix-turn-helix domain D0812_15505 PF02887 Pyruvate kinase, alpha/beta domain D0812_15505 PF00224 Pyruvate kinase, barrel domain D0812_15515 PF00990 Diguanylate cyclase, GGDEF domain D0812_15515 PF17158 Membrane-associated sensor, integral membrane domain D0812_15520 PF10369 Small subunit of acetolactate synthase D0812_15525 PF00205 Thiamine pyrophosphate enzyme, central domain D0812_15525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0812_15525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0812_15530 PF00501 AMP-binding enzyme D0812_15535 PF03466 LysR substrate binding domain D0812_15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_15545 PF01569 PAP2 superfamily D0812_15565 PF00682 HMGL-like D0812_15565 PF08502 LeuA allosteric (dimerisation) domain D0812_15570 PF00180 Isocitrate/isopropylmalate dehydrogenase D0812_15575 PF00330 Aconitase family (aconitate hydratase) D0812_15580 PF00694 Aconitase C-terminal domain D0812_15590 PF00226 DnaJ domain D0812_15590 PF05099 Tellurite resistance protein TerB D0812_15595 PF03968 OstA-like protein D0812_15595 PF04453 LPS transport system D D0812_15600 PF09312 SurA N-terminal domain D0812_15605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0812_15610 PF00398 Ribosomal RNA adenine dimethylase D0812_15615 PF04379 ApaG domain D0812_15620 PF00149 Calcineurin-like phosphoesterase D0812_15625 PF00186 Dihydrofolate reductase D0812_15630 PF12821 Threonine/Serine exporter, ThrE D0812_15635 PF06738 Putative threonine/serine exporter D0812_15640 PF01018 GTP1/OBG D0812_15640 PF01926 50S ribosome-binding GTPase D0812_15645 PF01016 Ribosomal L27 protein D0812_15650 PF00829 Ribosomal prokaryotic L21 protein D0812_15655 PF00348 Polyprenyl synthetase D0812_15665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0812_15665 PF00056 lactate/malate dehydrogenase, NAD binding domain D0812_15670 PF02863 Arginine repressor, C-terminal domain D0812_15670 PF01316 Arginine repressor, DNA binding domain D0812_15680 PF16868 NMT1-like family D0812_15695 PF00005 ABC transporter D0812_15700 PF00528 Binding-protein-dependent transport system inner membrane component D0812_15710 PF02441 Flavoprotein D0812_15715 PF08245 Mur ligase middle domain D0812_15715 PF02875 Mur ligase family, glutamate ligase domain D0812_15715 PF01225 Mur ligase family, catalytic domain D0812_15720 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0812_15725 PF00719 Inorganic pyrophosphatase D0812_15740 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0812_15745 PF04357 TamB, inner membrane protein subunit of TAM complex D0812_15750 PF01103 Surface antigen D0812_15750 PF07244 Surface antigen variable number repeat D0812_15750 PF17243 POTRA domain TamA domain 1 D0812_15755 PF01625 Peptide methionine sulfoxide reductase D0812_15785 PF14490 Helix-hairpin-helix containing domain D0812_15785 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D0812_15785 PF13538 UvrD-like helicase C-terminal domain D0812_15815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0812_15820 PF10795 Protein of unknown function (DUF2607) D0812_15830 PF00005 ABC transporter D0812_15855 PF03600 Citrate transporter D0812_15855 PF02080 TrkA-C domain D0812_15860 PF00009 Elongation factor Tu GTP binding domain D0812_15865 PF01507 Phosphoadenosine phosphosulfate reductase family D0812_15870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_15870 PF14824 Sirohaem biosynthesis protein central D0812_15870 PF10414 Sirohaem synthase dimerisation region D0812_15875 PF02872 5'-nucleotidase, C-terminal domain D0812_15875 PF00149 Calcineurin-like phosphoesterase D0812_15890 PF00270 DEAD/DEAH box helicase D0812_15890 PF00271 Helicase conserved C-terminal domain D0812_15890 PF03880 DbpA RNA binding domain D0812_15895 PF13673 Acetyltransferase (GNAT) domain D0812_15910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_15910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0812_15920 PF01196 Ribosomal protein L17 D0812_15925 PF01000 RNA polymerase Rpb3/RpoA insert domain D0812_15925 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0812_15925 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0812_15930 PF00163 Ribosomal protein S4/S9 N-terminal domain D0812_15930 PF01479 S4 domain D0812_15935 PF00411 Ribosomal protein S11 D0812_15940 PF00416 Ribosomal protein S13/S18 D0812_15945 PF00444 Ribosomal protein L36 D0812_15950 PF00344 SecY translocase D0812_15955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0812_15960 PF00327 Ribosomal protein L30p/L7e D0812_15965 PF03719 Ribosomal protein S5, C-terminal domain D0812_15965 PF00333 Ribosomal protein S5, N-terminal domain D0812_15970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0812_15975 PF00347 Ribosomal protein L6 D0812_15980 PF00410 Ribosomal protein S8 D0812_15985 PF00253 Ribosomal protein S14p/S29e D0812_15990 PF00673 ribosomal L5P family C-terminus D0812_15990 PF00281 Ribosomal protein L5 D0812_15995 PF00467 KOW motif D0812_15995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0812_16000 PF00238 Ribosomal protein L14p/L23e D0812_16005 PF00366 Ribosomal protein S17 D0812_16010 PF00831 Ribosomal L29 protein D0812_16015 PF00252 Ribosomal protein L16p/L10e D0812_16020 PF00189 Ribosomal protein S3, C-terminal domain D0812_16020 PF07650 KH domain D0812_16025 PF00237 Ribosomal protein L22p/L17e D0812_16030 PF00203 Ribosomal protein S19 D0812_16035 PF03947 Ribosomal Proteins L2, C-terminal domain D0812_16035 PF00181 Ribosomal Proteins L2, RNA binding domain D0812_16040 PF00276 Ribosomal protein L23 D0812_16045 PF00573 Ribosomal protein L4/L1 family D0812_16050 PF00297 Ribosomal protein L3 D0812_16055 PF00338 Ribosomal protein S10p/S20e D0812_16060 PF01197 Ribosomal protein L31 D0812_16070 PF17764 3′ DNA-binding domain (3′BD) D0812_16070 PF00271 Helicase conserved C-terminal domain D0812_16070 PF18074 Primosomal protein N C-terminal domain D0812_16070 PF00270 DEAD/DEAH box helicase D0812_16070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0812_16075 PF00356 Bacterial regulatory proteins, lacI family D0812_16085 PF00227 Proteasome subunit D0812_16090 PF07724 AAA domain (Cdc48 subfamily) D0812_16090 PF00004 ATPase family associated with various cellular activities (AAA) D0812_16095 PF01040 UbiA prenyltransferase family D0812_16100 PF03737 Aldolase/RraA D0812_16105 PF06005 Cell division protein ZapB D0812_16110 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0812_16115 PF00455 DeoR C terminal sensor domain D0812_16115 PF08220 DeoR-like helix-turn-helix domain D0812_16140 PF00121 Triosephosphate isomerase D0812_16150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0812_16150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0812_16150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0812_16155 PF00953 Glycosyl transferase family 4 D0812_16160 PF00571 CBS domain D0812_16160 PF01380 SIS domain D0812_16165 PF02348 Cytidylyltransferase D0812_16170 PF00793 DAHP synthetase I family D0812_16175 PF00535 Glycosyl transferase family 2 D0812_16205 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_16225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0812_16235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D0812_16240 PF04321 RmlD substrate binding domain D0812_16245 PF00483 Nucleotidyl transferase D0812_16250 PF16363 GDP-mannose 4,6 dehydratase D0812_16260 PF10531 SLBB domain D0812_16260 PF02563 Polysaccharide biosynthesis/export protein D0812_16260 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0812_16285 PF06082 Exopolysaccharide biosynthesis protein YbjH D0812_16290 PF01370 NAD dependent epimerase/dehydratase family D0812_16295 PF03279 Bacterial lipid A biosynthesis acyltransferase D0812_16305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0812_16310 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0812_16320 PF02719 Polysaccharide biosynthesis protein D0812_16325 PF13537 Glutamine amidotransferase domain D0812_16325 PF00733 Asparagine synthase D0812_16330 PF02397 Bacterial sugar transferase D0812_16350 PF02348 Cytidylyltransferase D0812_16360 PF01219 Prokaryotic diacylglycerol kinase D0812_16365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0812_16370 PF00535 Glycosyl transferase family 2 D0812_16375 PF00535 Glycosyl transferase family 2 D0812_16380 PF05686 Glycosyl transferase family 90 D0812_16385 PF01467 Cytidylyltransferase-like D0812_16390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0812_16390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0812_16390 PF06827 Zinc finger found in FPG and IleRS D0812_16400 PF00471 Ribosomal protein L33 D0812_16405 PF00830 Ribosomal L28 family D0812_16410 PF04002 RadC-like JAB domain D0812_16415 PF17200 Single Cache domain 2 D0812_16415 PF00672 HAMP domain D0812_16415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_16425 PF04127 DNA / pantothenate metabolism flavoprotein D0812_16425 PF02441 Flavoprotein D0812_16430 PF00440 Bacterial regulatory proteins, tetR family D0812_16435 PF03279 Bacterial lipid A biosynthesis acyltransferase D0812_16445 PF03725 3' exoribonuclease family, domain 2 D0812_16445 PF01138 3' exoribonuclease family, domain 1 D0812_16450 PF08340 Domain of unknown function (DUF1732) D0812_16450 PF03755 YicC-like family, N-terminal region D0812_16455 PF00486 Transcriptional regulatory protein, C terminal D0812_16455 PF00072 Response regulator receiver domain D0812_16465 PF00892 EamA-like transporter family D0812_16480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_16480 PF00005 ABC transporter D0812_16485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_16485 PF00005 ABC transporter D0812_16490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_16495 PF00528 Binding-protein-dependent transport system inner membrane component D0812_16495 PF12911 N-terminal TM domain of oligopeptide transport permease C D0812_16500 PF00528 Binding-protein-dependent transport system inner membrane component D0812_16510 PF07715 TonB-dependent Receptor Plug Domain D0812_16510 PF00593 TonB dependent receptor D0812_16525 PF01618 MotA/TolQ/ExbB proton channel family D0812_16530 PF02472 Biopolymer transport protein ExbD/TolR D0812_16545 PF00625 Guanylate kinase D0812_16550 PF01192 RNA polymerase Rpb6 D0812_16555 PF02824 TGS domain D0812_16555 PF13291 ACT domain D0812_16555 PF04607 Region found in RelA / SpoT proteins D0812_16560 PF00588 SpoU rRNA Methylase family D0812_16560 PF12105 SpoU, rRNA methylase, C-terminal D0812_16565 PF00271 Helicase conserved C-terminal domain D0812_16565 PF17191 RecG wedge domain D0812_16565 PF00270 DEAD/DEAH box helicase D0812_16570 PF00326 Prolyl oligopeptidase family D0812_16575 PF00860 Permease family D0812_16580 PF00672 HAMP domain D0812_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_16580 PF00512 His Kinase A (phospho-acceptor) domain D0812_16585 PF00072 Response regulator receiver domain D0812_16585 PF00486 Transcriptional regulatory protein, C terminal D0812_16590 PF03449 Transcription elongation factor, N-terminal D0812_16590 PF01272 Transcription elongation factor, GreA/GreB, C-term D0812_16600 PF09371 Tex-like protein N-terminal domain D0812_16600 PF17674 HHH domain D0812_16600 PF16921 Tex protein YqgF-like domain D0812_16600 PF00575 S1 RNA binding domain D0812_16610 PF00561 alpha/beta hydrolase fold D0812_16615 PF00156 Phosphoribosyl transferase domain D0812_16620 PF01106 NifU-like domain D0812_16620 PF01521 Iron-sulphur cluster biosynthesis D0812_16625 PF00293 NUDIX domain D0812_16630 PF00459 Inositol monophosphatase family D0812_16635 PF01203 Type II secretion system (T2SS), protein N D0812_16640 PF04612 Type II secretion system (T2SS), protein M D0812_16645 PF12693 GspL periplasmic domain D0812_16645 PF05134 Type II secretion system (T2SS), protein L D0812_16650 PF03934 Type II secretion system (T2SS), protein K D0812_16655 PF11612 Type II secretion system (T2SS), protein J D0812_16655 PF07963 Prokaryotic N-terminal methylation motif D0812_16660 PF02501 Type II secretion system (T2SS), protein I D0812_16660 PF07963 Prokaryotic N-terminal methylation motif D0812_16665 PF12019 Type II transport protein GspH D0812_16670 PF07963 Prokaryotic N-terminal methylation motif D0812_16670 PF08334 Type II secretion system (T2SS), protein G D0812_16675 PF00482 Type II secretion system (T2SS), protein F D0812_16680 PF00437 Type II/IV secretion system protein D0812_16685 PF03958 Bacterial type II/III secretion system short domain D0812_16685 PF00263 Bacterial type II and III secretion system protein D0812_16690 PF11356 Type II secretion system protein C D0812_16695 PF01479 S4 domain D0812_16700 PF01430 Hsp33 protein D0812_16705 PF01293 Phosphoenolpyruvate carboxykinase D0812_16715 PF09500 Putative thioesterase (yiiD_Cterm) D0812_16715 PF00583 Acetyltransferase (GNAT) family D0812_16720 PF02580 D-Tyr-tRNA(Tyr) deacylase D0812_16725 PF03631 Virulence factor BrkB D0812_16750 PF03951 Glutamine synthetase, beta-Grasp domain D0812_16750 PF00120 Glutamine synthetase, catalytic domain D0812_16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_16760 PF00512 His Kinase A (phospho-acceptor) domain D0812_16760 PF00989 PAS fold D0812_16765 PF00072 Response regulator receiver domain D0812_16765 PF00158 Sigma-54 interaction domain D0812_16765 PF02954 Bacterial regulatory protein, Fis family D0812_16770 PF03707 Bacterial signalling protein N terminal repeat D0812_16770 PF00563 EAL domain D0812_16770 PF00990 Diguanylate cyclase, GGDEF domain D0812_16775 PF00962 Adenosine/AMP deaminase D0812_16780 PF04055 Radical SAM superfamily D0812_16780 PF06969 HemN C-terminal domain D0812_16785 PF10675 Protein of unknown function (DUF2489) D0812_16790 PF04220 Der GTPase activator (YihI) D0812_16805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0812_16810 PF01926 50S ribosome-binding GTPase D0812_16820 PF01367 5'-3' exonuclease, C-terminal SAM fold D0812_16820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0812_16820 PF01612 3'-5' exonuclease D0812_16820 PF00476 DNA polymerase family A D0812_16835 PF00490 Delta-aminolevulinic acid dehydratase D0812_16840 PF01026 TatD related DNase D0812_16845 PF00902 Sec-independent protein translocase protein (TatC) D0812_16850 PF02416 mttA/Hcf106 family D0812_16855 PF02416 mttA/Hcf106 family D0812_16860 PF03109 ABC1 family D0812_16865 PF02036 SCP-2 sterol transfer family D0812_16870 PF01209 ubiE/COQ5 methyltransferase family D0812_16875 PF02646 RmuC family D0812_16885 PF00990 Diguanylate cyclase, GGDEF domain D0812_16885 PF03707 Bacterial signalling protein N terminal repeat D0812_16885 PF00563 EAL domain D0812_16910 PF02384 N-6 DNA Methylase D0812_16915 PF18766 SWI2/SNF2 ATPase D0812_16915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0812_16915 PF12008 Type I restriction and modification enzyme - subunit R C terminal D0812_17015 PF10625 Universal stress protein B (UspB) D0812_17020 PF00210 Ferritin-like domain D0812_17025 PF00582 Universal stress protein family D0812_17030 PF00892 EamA-like transporter family D0812_17040 PF04445 Putative SAM-dependent methyltransferase D0812_17045 PF08448 PAS fold D0812_17045 PF00990 Diguanylate cyclase, GGDEF domain D0812_17045 PF00563 EAL domain D0812_17050 PF01037 Lrp/AsnC ligand binding domain D0812_17055 PF01432 Peptidase family M3 D0812_17065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0812_17075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_17075 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_17105 PF02954 Bacterial regulatory protein, Fis family D0812_17120 PF04717 Type VI secretion system, phage-baseplate injector D0812_17150 PF01081 KDPG and KHG aldolase D0812_17155 PF02447 GntP family permease D0812_17160 PF01202 Shikimate kinase D0812_17165 PF00920 Dehydratase family D0812_17170 PF00893 Small Multidrug Resistance protein D0812_17175 PF00893 Small Multidrug Resistance protein D0812_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_17180 PF03466 LysR substrate binding domain D0812_17185 PF00356 Bacterial regulatory proteins, lacI family D0812_17185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0812_17190 PF00069 Protein kinase domain D0812_17220 PF12911 N-terminal TM domain of oligopeptide transport permease C D0812_17220 PF00528 Binding-protein-dependent transport system inner membrane component D0812_17230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_17235 PF00005 ABC transporter D0812_17235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_17275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0812_17280 PF13361 UvrD-like helicase C-terminal domain D0812_17280 PF00580 UvrD/REP helicase N-terminal domain D0812_17285 PF08359 YsiA-like protein, C-terminal region D0812_17285 PF00440 Bacterial regulatory proteins, tetR family D0812_17290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_17295 PF00873 AcrB/AcrD/AcrF family D0812_17305 PF04380 Membrane fusogenic activity D0812_17310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0812_17310 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0812_17315 PF03466 LysR substrate binding domain D0812_17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_17360 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_17365 PF07369 Protein of unknown function (DUF1488) D0812_17370 PF01488 Shikimate / quinate 5-dehydrogenase D0812_17370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0812_17370 PF08501 Shikimate dehydrogenase substrate binding domain D0812_17375 PF01218 Coproporphyrinogen III oxidase D0812_17380 PF01300 Telomere recombination D0812_17385 PF00731 AIR carboxylase D0812_17390 PF02222 ATP-grasp domain D0812_17390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0812_17395 PF01396 Topoisomerase DNA binding C4 zinc finger D0812_17400 PF04361 Protein of unknown function (DUF494) D0812_17405 PF17782 DprA winged helix domain D0812_17405 PF02481 DNA recombination-mediator protein A D0812_17415 PF01327 Polypeptide deformylase D0812_17420 PF00551 Formyl transferase D0812_17420 PF02911 Formyl transferase, C-terminal domain D0812_17425 PF01189 16S rRNA methyltransferase RsmB/F D0812_17425 PF01029 NusB family D0812_17430 PF02080 TrkA-C domain D0812_17430 PF02254 TrkA-N domain D0812_17435 PF02386 Cation transport protein D0812_17445 PF03006 Haemolysin-III related D0812_17450 PF07070 SpoOM protein D0812_17460 PF06288 Protein of unknown function (DUF1040) D0812_17465 PF12801 4Fe-4S binding domain D0812_17465 PF13746 4Fe-4S dicluster domain D0812_17465 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D0812_17470 PF01636 Phosphotransferase enzyme family D0812_17475 PF01323 DSBA-like thioredoxin domain D0812_17480 PF01553 Acyltransferase D0812_17490 PF13335 Magnesium chelatase, subunit ChlI C-terminal D0812_17490 PF01078 Magnesium chelatase, subunit ChlI D0812_17495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0812_17495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0812_17495 PF00205 Thiamine pyrophosphate enzyme, central domain D0812_17505 PF01063 Amino-transferase class IV D0812_17510 PF00920 Dehydratase family D0812_17515 PF00291 Pyridoxal-phosphate dependent enzyme D0812_17515 PF00585 C-terminal regulatory domain of Threonine dehydratase D0812_17520 PF00990 Diguanylate cyclase, GGDEF domain D0812_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_17525 PF03466 LysR substrate binding domain D0812_17530 PF07690 Major Facilitator Superfamily D0812_17535 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_17540 PF00528 Binding-protein-dependent transport system inner membrane component D0812_17545 PF12804 MobA-like NTP transferase domain D0812_17545 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_17550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0812_17550 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0812_17555 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0812_17555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_17560 PF00231 ATP synthase D0812_17565 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0812_17565 PF00306 ATP synthase alpha/beta chain, C terminal domain D0812_17565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_17570 PF00213 ATP synthase delta (OSCP) subunit D0812_17575 PF00430 ATP synthase B/B' CF(0) D0812_17580 PF00137 ATP synthase subunit C D0812_17585 PF00119 ATP synthase A chain D0812_17590 PF03899 ATP synthase I chain D0812_17595 PF17762 HTH domain found in ParB protein D0812_17595 PF02195 ParB-like nuclease domain D0812_17600 PF13614 AAA domain D0812_17605 PF02527 rRNA small subunit methyltransferase G D0812_17610 PF13932 GidA associated domain D0812_17610 PF01134 Glucose inhibited division protein A D0812_17615 PF00258 Flavodoxin D0812_17620 PF01926 50S ribosome-binding GTPase D0812_17620 PF10396 GTP-binding protein TrmE N-terminus D0812_17620 PF12631 MnmE helical domain D0812_17625 PF14849 YidC periplasmic domain D0812_17625 PF02096 60Kd inner membrane protein D0812_17630 PF01809 Putative membrane protein insertion efficiency factor D0812_17635 PF00825 Ribonuclease P D0812_17640 PF00468 Ribosomal protein L34 D0812_17645 PF00005 ABC transporter D0812_17650 PF00528 Binding-protein-dependent transport system inner membrane component D0812_17655 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_17660 PF05651 Putative sugar diacid recognition D0812_17660 PF17853 GGDEF-like domain D0812_17660 PF13556 PucR C-terminal helix-turn-helix domain D0812_17665 PF02595 Glycerate kinase family D0812_17670 PF00392 Bacterial regulatory proteins, gntR family D0812_17670 PF00155 Aminotransferase class I and II D0812_17715 PF00583 Acetyltransferase (GNAT) family D0812_17745 PF03264 NapC/NirT cytochrome c family, N-terminal region D0812_17750 PF00384 Molybdopterin oxidoreductase D0812_17750 PF18364 Molybdopterin oxidoreductase N-terminal domain D0812_17750 PF01568 Molydopterin dinucleotide binding domain D0812_17755 PF00512 His Kinase A (phospho-acceptor) domain D0812_17755 PF18719 ArlS sensor domain D0812_17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_17765 PF01569 PAP2 superfamily D0812_17775 PF00933 Glycosyl hydrolase family 3 N terminal domain D0812_17780 PF02581 Thiamine monophosphate synthase D0812_17785 PF02110 Hydroxyethylthiazole kinase family D0812_17790 PF03070 TENA/THI-4/PQQC family D0812_17795 PF09084 NMT1/THI5 like D0812_17800 PF00528 Binding-protein-dependent transport system inner membrane component D0812_17805 PF00005 ABC transporter D0812_17810 PF08543 Phosphomethylpyrimidine kinase D0812_17815 PF01523 Putative modulator of DNA gyrase D0812_17820 PF01523 Putative modulator of DNA gyrase D0812_17825 PF04013 Putative SAM-dependent RNA methyltransferase D0812_17880 PF10928 Protein of unknown function (DUF2810) D0812_17885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0812_17885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0812_17895 PF03009 Glycerophosphoryl diester phosphodiesterase family D0812_17905 PF00072 Response regulator receiver domain D0812_17905 PF00486 Transcriptional regulatory protein, C terminal D0812_17910 PF00512 His Kinase A (phospho-acceptor) domain D0812_17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_17910 PF00672 HAMP domain D0812_17910 PF16750 Sensor domain of 2-component histidine kinase D0812_17915 PF07715 TonB-dependent Receptor Plug Domain D0812_17915 PF00593 TonB dependent receptor D0812_17925 PF01618 MotA/TolQ/ExbB proton channel family D0812_17930 PF01618 MotA/TolQ/ExbB proton channel family D0812_17935 PF02472 Biopolymer transport protein ExbD/TolR D0812_17980 PF01297 Zinc-uptake complex component A periplasmic D0812_17985 PF00005 ABC transporter D0812_17990 PF00950 ABC 3 transport family D0812_18005 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0812_18005 PF00326 Prolyl oligopeptidase family D0812_18010 PF07690 Major Facilitator Superfamily D0812_18015 PF00491 Arginase family D0812_18020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0812_18020 PF17944 Arginine decarboxylase C-terminal helical extension D0812_18020 PF17810 Arginine decarboxylase helical bundle domain D0812_18025 PF00753 Metallo-beta-lactamase superfamily D0812_18030 PF08443 RimK-like ATP-grasp domain D0812_18030 PF18030 RimK PreATP-grasp domain D0812_18035 PF18030 RimK PreATP-grasp domain D0812_18035 PF08443 RimK-like ATP-grasp domain D0812_18050 PF12706 Beta-lactamase superfamily domain D0812_18060 PF03466 LysR substrate binding domain D0812_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18085 PF00232 Glycosyl hydrolase family 1 D0812_18090 PF00512 His Kinase A (phospho-acceptor) domain D0812_18090 PF02743 Cache domain D0812_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_18095 PF00158 Sigma-54 interaction domain D0812_18095 PF00072 Response regulator receiver domain D0812_18095 PF02954 Bacterial regulatory protein, Fis family D0812_18100 PF00990 Diguanylate cyclase, GGDEF domain D0812_18100 PF08448 PAS fold D0812_18105 PF05525 Branched-chain amino acid transport protein D0812_18125 PF01266 FAD dependent oxidoreductase D0812_18140 PF03116 NQR2, RnfD, RnfE family D0812_18145 PF01212 Beta-eliminating lyase D0812_18165 PF07670 Nucleoside recognition D0812_18165 PF01773 Na+ dependent nucleoside transporter N-terminus D0812_18165 PF07662 Na+ dependent nucleoside transporter C-terminus D0812_18170 PF00483 Nucleotidyl transferase D0812_18190 PF05230 MASE2 domain D0812_18190 PF00990 Diguanylate cyclase, GGDEF domain D0812_18205 PF00990 Diguanylate cyclase, GGDEF domain D0812_18210 PF03441 FAD binding domain of DNA photolyase D0812_18210 PF00875 DNA photolyase D0812_18215 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D0812_18230 PF01625 Peptide methionine sulfoxide reductase D0812_18230 PF01641 SelR domain D0812_18235 PF02566 OsmC-like protein D0812_18240 PF14602 Hexapeptide repeat of succinyl-transferase D0812_18240 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_18240 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D0812_18270 PF03466 LysR substrate binding domain D0812_18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18275 PF13419 Haloacid dehalogenase-like hydrolase D0812_18310 PF00657 GDSL-like Lipase/Acylhydrolase D0812_18325 PF03611 PTS system sugar-specific permease component D0812_18335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_18340 PF00356 Bacterial regulatory proteins, lacI family D0812_18345 PF13419 Haloacid dehalogenase-like hydrolase D0812_18355 PF00266 Aminotransferase class-V D0812_18370 PF00005 ABC transporter D0812_18375 PF00528 Binding-protein-dependent transport system inner membrane component D0812_18380 PF07702 UTRA domain D0812_18380 PF00392 Bacterial regulatory proteins, gntR family D0812_18395 PF04393 Protein of unknown function (DUF535) D0812_18405 PF01266 FAD dependent oxidoreductase D0812_18410 PF00246 Zinc carboxypeptidase D0812_18410 PF18027 Cytosolic carboxypeptidase N-terminal domain D0812_18415 PF01389 OmpA-like transmembrane domain D0812_18415 PF00691 OmpA family D0812_18420 PF03466 LysR substrate binding domain D0812_18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18430 PF03466 LysR substrate binding domain D0812_18440 PF01566 Natural resistance-associated macrophage protein D0812_18445 PF00854 POT family D0812_18450 PF03315 Serine dehydratase beta chain D0812_18450 PF03313 Serine dehydratase alpha chain D0812_18475 PF01476 LysM domain D0812_18475 PF01464 Transglycosylase SLT domain D0812_18495 PF00460 Flagella basal body rod protein D0812_18500 PF00460 Flagella basal body rod protein D0812_18500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_18505 PF13860 FlgD Ig-like domain D0812_18505 PF13861 FlgD Tudor-like domain D0812_18505 PF03963 Flagellar hook capping protein - N-terminal region D0812_18510 PF07559 Flagellar basal body protein FlaE D0812_18510 PF00460 Flagella basal body rod protein D0812_18510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_18515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_18515 PF00460 Flagella basal body rod protein D0812_18520 PF00460 Flagella basal body rod protein D0812_18520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_18525 PF02107 Flagellar L-ring protein D0812_18530 PF02119 Flagellar P-ring protein D0812_18535 PF10135 Rod binding protein D0812_18535 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0812_18540 PF00460 Flagella basal body rod protein D0812_18540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0812_18545 PF00669 Bacterial flagellin N-terminal helical region D0812_18545 PF00700 Bacterial flagellin C-terminal helical region D0812_18565 PF01070 FMN-dependent dehydrogenase D0812_18570 PF03466 LysR substrate binding domain D0812_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18590 PF03741 Integral membrane protein TerC family D0812_18590 PF03471 Transporter associated domain D0812_18595 PF00486 Transcriptional regulatory protein, C terminal D0812_18595 PF18500 CadC C-terminal domain 1 D0812_18610 PF08241 Methyltransferase domain D0812_18640 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_18650 PF08000 Bacterial PH domain D0812_18665 PF00691 OmpA family D0812_18665 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0812_18670 PF01618 MotA/TolQ/ExbB proton channel family D0812_18675 PF04542 Sigma-70 region 2 D0812_18675 PF04545 Sigma-70, region 4 D0812_18680 PF03748 Flagellar basal body-associated protein FliL D0812_18695 PF02561 Flagellar protein FliS D0812_18700 PF07196 Flagellin hook IN motif D0812_18700 PF07195 Flagellar hook-associated protein 2 C-terminus D0812_18700 PF02465 Flagellar hook-associated protein 2 N-terminus D0812_18710 PF00669 Bacterial flagellin N-terminal helical region D0812_18710 PF00700 Bacterial flagellin C-terminal helical region D0812_18720 PF00771 FHIPEP family D0812_18725 PF01312 FlhB HrpN YscU SpaS Family D0812_18730 PF01311 Bacterial export proteins, family 1 D0812_18735 PF01313 Bacterial export proteins, family 3 D0812_18740 PF00813 FliP family D0812_18745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0812_18760 PF00158 Sigma-54 interaction domain D0812_18760 PF00072 Response regulator receiver domain D0812_18760 PF02954 Bacterial regulatory protein, Fis family D0812_18765 PF02049 Flagellar hook-basal body complex protein FliE D0812_18770 PF01514 Secretory protein of YscJ/FliF family D0812_18770 PF08345 Flagellar M-ring protein C-terminal D0812_18775 PF01706 FliG C-terminal domain D0812_18775 PF14841 FliG middle domain D0812_18775 PF14842 FliG N-terminal domain D0812_18785 PF18269 T3SS EscN ATPase C-terminal domain D0812_18785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_18795 PF00563 EAL domain D0812_18795 PF00990 Diguanylate cyclase, GGDEF domain D0812_18795 PF08448 PAS fold D0812_18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18805 PF03466 LysR substrate binding domain D0812_18810 PF00892 EamA-like transporter family D0812_18855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_18860 PF03466 LysR substrate binding domain D0812_18880 PF00486 Transcriptional regulatory protein, C terminal D0812_18880 PF00072 Response regulator receiver domain D0812_18885 PF00512 His Kinase A (phospho-acceptor) domain D0812_18885 PF08448 PAS fold D0812_18885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_18885 PF00072 Response regulator receiver domain D0812_18885 PF13426 PAS domain D0812_18890 PF00266 Aminotransferase class-V D0812_18900 PF03707 Bacterial signalling protein N terminal repeat D0812_18900 PF00990 Diguanylate cyclase, GGDEF domain D0812_18900 PF00563 EAL domain D0812_18905 PF00155 Aminotransferase class I and II D0812_18910 PF00107 Zinc-binding dehydrogenase D0812_18910 PF08240 Alcohol dehydrogenase GroES-like domain D0812_18965 PF00194 Eukaryotic-type carbonic anhydrase D0812_18970 PF00924 Mechanosensitive ion channel D0812_18985 PF01070 FMN-dependent dehydrogenase D0812_18990 PF02652 L-lactate permease D0812_18995 PF03466 LysR substrate binding domain D0812_18995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19000 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0812_19000 PF00326 Prolyl oligopeptidase family D0812_19005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_19005 PF00005 ABC transporter D0812_19015 PF05362 Lon protease (S16) C-terminal proteolytic domain D0812_19015 PF13654 AAA domain D0812_19020 PF00672 HAMP domain D0812_19020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_19025 PF13609 Gram-negative porin D0812_19030 PF12945 Flagellar protein YcgR D0812_19030 PF07238 PilZ domain D0812_19045 PF13302 Acetyltransferase (GNAT) domain D0812_19050 PF12800 4Fe-4S binding domain D0812_19050 PF12838 4Fe-4S dicluster domain D0812_19055 PF12801 4Fe-4S binding domain D0812_19055 PF12837 4Fe-4S binding domain D0812_19070 PF01022 Bacterial regulatory protein, arsR family D0812_19075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0812_19075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0812_19080 PF04074 YhcH/YjgK/YiaL D0812_19095 PF00005 ABC transporter D0812_19095 PF12558 ATP-binding cassette cobalt transporter D0812_19100 PF07155 ECF-type riboflavin transporter, S component D0812_19105 PF00529 HlyD membrane-fusion protein of T1SS D0812_19105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_19110 PF11742 Protein of unknown function (DUF3302) D0812_19120 PF00990 Diguanylate cyclase, GGDEF domain D0812_19135 PF01048 Phosphorylase superfamily D0812_19145 PF08349 Protein of unknown function (DUF1722) D0812_19150 PF13411 MerR HTH family regulatory protein D0812_19155 PF03441 FAD binding domain of DNA photolyase D0812_19155 PF00875 DNA photolyase D0812_19160 PF03734 L,D-transpeptidase catalytic domain D0812_19160 PF01476 LysM domain D0812_19160 PF17969 L,D-transpeptidase C-terminal domain D0812_19170 PF00270 DEAD/DEAH box helicase D0812_19170 PF00271 Helicase conserved C-terminal domain D0812_19200 PF00589 Phage integrase family D0812_19200 PF02899 Phage integrase, N-terminal SAM-like domain D0812_19215 PF02384 N-6 DNA Methylase D0812_19215 PF12161 HsdM N-terminal domain D0812_19230 PF18766 SWI2/SNF2 ATPase D0812_19230 PF11867 Domain of unknown function (DUF3387) D0812_19230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0812_19240 PF00589 Phage integrase family D0812_19240 PF02899 Phage integrase, N-terminal SAM-like domain D0812_19260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0812_19260 PF00326 Prolyl oligopeptidase family D0812_19265 PF00593 TonB dependent receptor D0812_19265 PF07715 TonB-dependent Receptor Plug Domain D0812_19290 PF12849 PBP superfamily domain D0812_19295 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19300 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19305 PF00005 ABC transporter D0812_19320 PF13519 von Willebrand factor type A domain D0812_19325 PF13519 von Willebrand factor type A domain D0812_19335 PF01882 Protein of unknown function DUF58 D0812_19340 PF17863 AAA lid domain D0812_19340 PF07726 ATPase family associated with various cellular activities (AAA) D0812_19360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_19360 PF00672 HAMP domain D0812_19360 PF02743 Cache domain D0812_19370 PF00196 Bacterial regulatory proteins, luxR family D0812_19375 PF00196 Bacterial regulatory proteins, luxR family D0812_19385 PF00664 ABC transporter transmembrane region D0812_19385 PF00005 ABC transporter D0812_19390 PF00529 HlyD membrane-fusion protein of T1SS D0812_19395 PF14602 Hexapeptide repeat of succinyl-transferase D0812_19395 PF12464 Maltose acetyltransferase D0812_19400 PF00072 Response regulator receiver domain D0812_19400 PF02954 Bacterial regulatory protein, Fis family D0812_19400 PF00158 Sigma-54 interaction domain D0812_19405 PF00512 His Kinase A (phospho-acceptor) domain D0812_19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_19410 PF12849 PBP superfamily domain D0812_19415 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19420 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19425 PF00005 ABC transporter D0812_19445 PF00691 OmpA family D0812_19445 PF01389 OmpA-like transmembrane domain D0812_19465 PF00691 OmpA family D0812_19475 PF00990 Diguanylate cyclase, GGDEF domain D0812_19475 PF00563 EAL domain D0812_19475 PF03707 Bacterial signalling protein N terminal repeat D0812_19480 PF02378 Phosphotransferase system, EIIC D0812_19485 PF00127 Copper binding proteins, plastocyanin/azurin family D0812_19495 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_19500 PF00375 Sodium:dicarboxylate symporter family D0812_19510 PF13419 Haloacid dehalogenase-like hydrolase D0812_19515 PF00158 Sigma-54 interaction domain D0812_19515 PF01590 GAF domain D0812_19520 PF00301 Rubredoxin D0812_19520 PF00753 Metallo-beta-lactamase superfamily D0812_19520 PF00258 Flavodoxin D0812_19525 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_19525 PF18113 Rubredoxin binding C-terminal domain D0812_19540 PF11742 Protein of unknown function (DUF3302) D0812_19545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_19545 PF00529 HlyD membrane-fusion protein of T1SS D0812_19550 PF03466 LysR substrate binding domain D0812_19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19560 PF01238 Phosphomannose isomerase type I D0812_19565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_19565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_19570 PF12833 Helix-turn-helix domain D0812_19580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19590 PF03466 LysR substrate binding domain D0812_19600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0812_19600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0812_19605 PF06628 Catalase-related immune-responsive D0812_19605 PF00199 Catalase D0812_19615 PF00107 Zinc-binding dehydrogenase D0812_19615 PF16884 N-terminal domain of oxidoreductase D0812_19620 PF16925 Tetracyclin repressor-like, C-terminal domain D0812_19620 PF00440 Bacterial regulatory proteins, tetR family D0812_19630 PF00144 Beta-lactamase D0812_19660 PF00534 Glycosyl transferases group 1 D0812_19660 PF13439 Glycosyltransferase Family 4 D0812_19670 PF13614 AAA domain D0812_19670 PF13807 G-rich domain on putative tyrosine kinase D0812_19670 PF02706 Chain length determinant protein D0812_19685 PF02397 Bacterial sugar transferase D0812_19690 PF00005 ABC transporter D0812_19690 PF08402 TOBE domain D0812_19700 PF01547 Bacterial extracellular solute-binding protein D0812_19705 PF14785 Maltose transport system permease protein MalF P2 domain D0812_19705 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19710 PF00528 Binding-protein-dependent transport system inner membrane component D0812_19740 PF05661 Protein of unknown function (DUF808) D0812_19745 PF01979 Amidohydrolase family D0812_19750 PF01679 Proteolipid membrane potential modulator D0812_19755 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_19755 PF03473 MOSC domain D0812_19755 PF03476 MOSC N-terminal beta barrel domain D0812_19755 PF03473 MOSC domain D0812_19755 PF03476 MOSC N-terminal beta barrel domain D0812_19755 PF00111 2Fe-2S iron-sulfur cluster binding domain D0812_19760 PF02540 NAD synthase D0812_19765 PF01467 Cytidylyltransferase-like D0812_19805 PF00005 ABC transporter D0812_19810 PF01032 FecCD transport family D0812_19820 PF02472 Biopolymer transport protein ExbD/TolR D0812_19825 PF01618 MotA/TolQ/ExbB proton channel family D0812_19830 PF03544 Gram-negative bacterial TonB protein C-terminal D0812_19835 PF04055 Radical SAM superfamily D0812_19840 PF06228 Haem utilisation ChuX/HutX D0812_19845 PF01243 Pyridoxamine 5'-phosphate oxidase D0812_19860 PF00072 Response regulator receiver domain D0812_19860 PF01584 CheW-like domain D0812_19870 PF00128 Alpha amylase, catalytic domain D0812_19875 PF00698 Acyl transferase domain D0812_19875 PF16197 Ketoacyl-synthetase C-terminal extension D0812_19875 PF08659 KR domain D0812_19875 PF00550 Phosphopantetheine attachment site D0812_19875 PF14765 Polyketide synthase dehydratase D0812_19875 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_19875 PF08240 Alcohol dehydrogenase GroES-like domain D0812_19875 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19900 PF03466 LysR substrate binding domain D0812_19930 PF03466 LysR substrate binding domain D0812_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19940 PF14706 Transposase DNA-binding D0812_19940 PF01609 Transposase DDE domain D0812_19940 PF02281 Transposase Tn5 dimerisation domain D0812_19945 PF00999 Sodium/hydrogen exchanger family D0812_19945 PF02254 TrkA-N domain D0812_19950 PF02525 Flavodoxin-like fold D0812_19955 PF03466 LysR substrate binding domain D0812_19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_19975 PF07690 Major Facilitator Superfamily D0812_19990 PF00857 Isochorismatase family D0812_19995 PF12833 Helix-turn-helix domain D0812_19995 PF02311 AraC-like ligand binding domain D0812_20000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0812_20005 PF00884 Sulfatase D0812_20005 PF08019 Phosphoethanolamine transferase EptA/EptB D0812_20010 PF01219 Prokaryotic diacylglycerol kinase D0812_20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20020 PF00672 HAMP domain D0812_20020 PF00512 His Kinase A (phospho-acceptor) domain D0812_20025 PF00072 Response regulator receiver domain D0812_20025 PF00486 Transcriptional regulatory protein, C terminal D0812_20030 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_20035 PF13378 Enolase C-terminal domain-like D0812_20035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0812_20040 PF00890 FAD binding domain D0812_20040 PF04205 FMN-binding domain D0812_20045 PF00392 Bacterial regulatory proteins, gntR family D0812_20045 PF07729 FCD domain D0812_20050 PF00106 short chain dehydrogenase D0812_20065 PF01323 DSBA-like thioredoxin domain D0812_20080 PF00255 Glutathione peroxidase D0812_20085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0812_20095 PF07690 Major Facilitator Superfamily D0812_20110 PF01966 HD domain D0812_20125 PF07969 Amidohydrolase family D0812_20130 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0812_20135 PF00571 CBS domain D0812_20135 PF01769 Divalent cation transporter D0812_20135 PF03448 MgtE intracellular N domain D0812_20140 PF03109 ABC1 family D0812_20145 PF00529 HlyD membrane-fusion protein of T1SS D0812_20145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_20170 PF00486 Transcriptional regulatory protein, C terminal D0812_20170 PF00072 Response regulator receiver domain D0812_20175 PF16527 Two-component sensor protein CpxA, periplasmic domain D0812_20175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20175 PF00672 HAMP domain D0812_20175 PF00512 His Kinase A (phospho-acceptor) domain D0812_20185 PF00155 Aminotransferase class I and II D0812_20185 PF00392 Bacterial regulatory proteins, gntR family D0812_20195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_20200 PF00873 AcrB/AcrD/AcrF family D0812_20205 PF13520 Amino acid permease D0812_20210 PF01037 Lrp/AsnC ligand binding domain D0812_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_20220 PF03466 LysR substrate binding domain D0812_20235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0812_20235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0812_20240 PF00672 HAMP domain D0812_20240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20240 PF00512 His Kinase A (phospho-acceptor) domain D0812_20240 PF01627 Hpt domain D0812_20240 PF00072 Response regulator receiver domain D0812_20240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0812_20245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0812_20250 PF01554 MatE D0812_20255 PF04363 Protein of unknown function (DUF496) D0812_20265 PF04337 Protein of unknown function, DUF480 D0812_20270 PF01541 GIY-YIG catalytic domain D0812_20275 PF13407 Periplasmic binding protein domain D0812_20280 PF00512 His Kinase A (phospho-acceptor) domain D0812_20280 PF00072 Response regulator receiver domain D0812_20280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20280 PF09308 LuxQ, periplasmic D0812_20295 PF01037 Lrp/AsnC ligand binding domain D0812_20325 PF13721 SecD export protein N-terminal TM region D0812_20325 PF02355 Protein export membrane protein D0812_20325 PF07549 SecD/SecF GG Motif D0812_20330 PF02355 Protein export membrane protein D0812_20330 PF07549 SecD/SecF GG Motif D0812_20340 PF01810 LysE type translocator D0812_20345 PF00106 short chain dehydrogenase D0812_20350 PF00108 Thiolase, N-terminal domain D0812_20350 PF02803 Thiolase, C-terminal domain D0812_20360 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D0812_20360 PF00561 alpha/beta hydrolase fold D0812_20370 PF03264 NapC/NirT cytochrome c family, N-terminal region D0812_20375 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D0812_20380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_20380 PF00384 Molybdopterin oxidoreductase D0812_20380 PF01568 Molydopterin dinucleotide binding domain D0812_20390 PF12838 4Fe-4S dicluster domain D0812_20390 PF13187 4Fe-4S dicluster domain D0812_20395 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0812_20395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20395 PF00672 HAMP domain D0812_20395 PF07730 Histidine kinase D0812_20400 PF00072 Response regulator receiver domain D0812_20400 PF00196 Bacterial regulatory proteins, luxR family D0812_20415 PF07687 Peptidase dimerisation domain D0812_20415 PF01546 Peptidase family M20/M25/M40 D0812_20420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0812_20425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_20430 PF00873 AcrB/AcrD/AcrF family D0812_20435 PF12729 Four helix bundle sensory module for signal transduction D0812_20435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_20435 PF00672 HAMP domain D0812_20440 PF00472 RF-1 domain D0812_20445 PF13419 Haloacid dehalogenase-like hydrolase D0812_20450 PF00196 Bacterial regulatory proteins, luxR family D0812_20450 PF00072 Response regulator receiver domain D0812_20475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0812_20475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0812_20485 PF00691 OmpA family D0812_20485 PF05736 OprF membrane domain D0812_20505 PF00313 'Cold-shock' DNA-binding domain D0812_20510 PF03889 Alternative ribosome-rescue factor A D0812_20520 PF05230 MASE2 domain D0812_20520 PF00990 Diguanylate cyclase, GGDEF domain D0812_20535 PF12704 MacB-like periplasmic core domain D0812_20535 PF00005 ABC transporter D0812_20535 PF02687 FtsX-like permease family D0812_20540 PF12704 MacB-like periplasmic core domain D0812_20540 PF00005 ABC transporter D0812_20540 PF02687 FtsX-like permease family D0812_20550 PF04539 Sigma-70 region 3 D0812_20550 PF04542 Sigma-70 region 2 D0812_20550 PF04545 Sigma-70, region 4 D0812_20550 PF00140 Sigma-70 factor, region 1.2 D0812_20560 PF00005 ABC transporter D0812_20565 PF00664 ABC transporter transmembrane region D0812_20565 PF00005 ABC transporter D0812_20570 PF02321 Outer membrane efflux protein D0812_20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_20575 PF00072 Response regulator receiver domain D0812_20580 PF13533 Biotin-lipoyl like D0812_20600 PF00672 HAMP domain D0812_20600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_20605 PF00210 Ferritin-like domain D0812_20615 PF17676 LD-carboxypeptidase C-terminal domain D0812_20615 PF02016 LD-carboxypeptidase N-terminal domain D0812_20620 PF07995 Glucose / Sorbosone dehydrogenase D0812_20625 PF00465 Iron-containing alcohol dehydrogenase D0812_20635 PF00892 EamA-like transporter family D0812_20645 PF03466 LysR substrate binding domain D0812_20645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_20655 PF00501 AMP-binding enzyme D0812_20655 PF13193 AMP-binding enzyme C-terminal domain D0812_20665 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D0812_20670 PF01329 Pterin 4 alpha carbinolamine dehydratase D0812_20700 PF12843 Putative quorum-sensing-regulated virulence factor D0812_20720 PF01470 Pyroglutamyl peptidase D0812_20730 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0812_20730 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0812_20735 PF03707 Bacterial signalling protein N terminal repeat D0812_20735 PF00990 Diguanylate cyclase, GGDEF domain D0812_20735 PF00563 EAL domain D0812_20740 PF00270 DEAD/DEAH box helicase D0812_20740 PF00271 Helicase conserved C-terminal domain D0812_20760 PF00563 EAL domain D0812_20760 PF12792 CSS motif domain associated with EAL D0812_20765 PF00005 ABC transporter D0812_20825 PF12849 PBP superfamily domain D0812_20835 PF12833 Helix-turn-helix domain D0812_20840 PF08206 Ribonuclease B OB domain D0812_20840 PF00575 S1 RNA binding domain D0812_20840 PF00773 RNB domain D0812_20845 PF00270 DEAD/DEAH box helicase D0812_20845 PF03880 DbpA RNA binding domain D0812_20845 PF00271 Helicase conserved C-terminal domain D0812_20855 PF00871 Acetokinase family D0812_20860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0812_20860 PF00034 Cytochrome c D0812_20870 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0812_20875 PF00034 Cytochrome c D0812_20890 PF00682 HMGL-like D0812_20895 PF00378 Enoyl-CoA hydratase/isomerase D0812_20900 PF01039 Carboxyl transferase domain D0812_20905 PF02770 Acyl-CoA dehydrogenase, middle domain D0812_20905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0812_20905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0812_20910 PF00376 MerR family regulatory protein D0812_20910 PF09278 MerR, DNA binding D0812_20915 PF00108 Thiolase, N-terminal domain D0812_20915 PF02803 Thiolase, C-terminal domain D0812_20920 PF00171 Aldehyde dehydrogenase family D0812_20930 PF00378 Enoyl-CoA hydratase/isomerase D0812_20935 PF00378 Enoyl-CoA hydratase/isomerase D0812_20940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0812_20940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0812_20955 PF06481 COX Aromatic Rich Motif D0812_20955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0812_20960 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0812_20965 PF00510 Cytochrome c oxidase subunit III D0812_20970 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D0812_20975 PF01040 UbiA prenyltransferase family D0812_20980 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_20980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_20995 PF00171 Aldehyde dehydrogenase family D0812_21005 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_21020 PF01447 Thermolysin metallopeptidase, catalytic domain D0812_21020 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0812_21020 PF07504 Fungalysin/Thermolysin Propeptide Motif D0812_21020 PF03413 Peptidase propeptide and YPEB domain D0812_21020 PF04151 Bacterial pre-peptidase C-terminal domain D0812_21025 PF04389 Peptidase family M28 D0812_21025 PF04151 Bacterial pre-peptidase C-terminal domain D0812_21040 PF03466 LysR substrate binding domain D0812_21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21055 PF03466 LysR substrate binding domain D0812_21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21070 PF00005 ABC transporter D0812_21075 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_21080 PF00528 Binding-protein-dependent transport system inner membrane component D0812_21085 PF00528 Binding-protein-dependent transport system inner membrane component D0812_21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_21100 PF03466 LysR substrate binding domain D0812_21100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21105 PF13417 Glutathione S-transferase, N-terminal domain D0812_21105 PF00043 Glutathione S-transferase, C-terminal domain D0812_21110 PF00884 Sulfatase D0812_21115 PF04205 FMN-binding domain D0812_21115 PF03358 NADPH-dependent FMN reductase D0812_21115 PF00890 FAD binding domain D0812_21120 PF02424 ApbE family D0812_21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21135 PF03466 LysR substrate binding domain D0812_21145 PF01012 Electron transfer flavoprotein domain D0812_21150 PF01012 Electron transfer flavoprotein domain D0812_21150 PF00766 Electron transfer flavoprotein FAD-binding domain D0812_21155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0812_21155 PF00364 Biotin-requiring enzyme D0812_21155 PF02817 e3 binding domain D0812_21160 PF02780 Transketolase, C-terminal domain D0812_21160 PF02779 Transketolase, pyrimidine binding domain D0812_21165 PF00676 Dehydrogenase E1 component D0812_21180 PF00012 Hsp70 protein D0812_21185 PF04314 Copper chaperone PCu(A)C D0812_21215 PF00072 Response regulator receiver domain D0812_21215 PF00486 Transcriptional regulatory protein, C terminal D0812_21230 PF00245 Alkaline phosphatase D0812_21245 PF01483 Proprotein convertase P-domain D0812_21245 PF00082 Subtilase family D0812_21255 PF00990 Diguanylate cyclase, GGDEF domain D0812_21255 PF08448 PAS fold D0812_21265 PF03222 Tryptophan/tyrosine permease family D0812_21270 PF00990 Diguanylate cyclase, GGDEF domain D0812_21270 PF00563 EAL domain D0812_21270 PF08448 PAS fold D0812_21280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_21280 PF00384 Molybdopterin oxidoreductase D0812_21280 PF01568 Molydopterin dinucleotide binding domain D0812_21285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_21285 PF14824 Sirohaem biosynthesis protein central D0812_21285 PF10414 Sirohaem synthase dimerisation region D0812_21290 PF00591 Glycosyl transferase family, a/b domain D0812_21290 PF02885 Glycosyl transferase family, helical bundle domain D0812_21295 PF01738 Dienelactone hydrolase family D0812_21300 PF00072 Response regulator receiver domain D0812_21300 PF03861 ANTAR domain D0812_21310 PF00005 ABC transporter D0812_21315 PF00528 Binding-protein-dependent transport system inner membrane component D0812_21320 PF00005 ABC transporter D0812_21325 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0812_21325 PF04324 BFD-like [2Fe-2S] binding domain D0812_21325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0812_21325 PF13806 Rieske-like [2Fe-2S] domain D0812_21325 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_21325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0812_21355 PF00211 Adenylate and Guanylate cyclase catalytic domain D0812_21355 PF00072 Response regulator receiver domain D0812_21365 PF00990 Diguanylate cyclase, GGDEF domain D0812_21365 PF00563 EAL domain D0812_21365 PF03707 Bacterial signalling protein N terminal repeat D0812_21370 PF08334 Type II secretion system (T2SS), protein G D0812_21370 PF07963 Prokaryotic N-terminal methylation motif D0812_21375 PF00486 Transcriptional regulatory protein, C terminal D0812_21375 PF00072 Response regulator receiver domain D0812_21380 PF00512 His Kinase A (phospho-acceptor) domain D0812_21380 PF00672 HAMP domain D0812_21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_21385 PF14245 Type IV pilin PilA D0812_21385 PF07963 Prokaryotic N-terminal methylation motif D0812_21390 PF00486 Transcriptional regulatory protein, C terminal D0812_21390 PF00072 Response regulator receiver domain D0812_21405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_21415 PF02195 ParB-like nuclease domain D0812_21430 PF01810 LysE type translocator D0812_21435 PF03222 Tryptophan/tyrosine permease family D0812_21445 PF00106 short chain dehydrogenase D0812_21450 PF09339 IclR helix-turn-helix domain D0812_21450 PF01614 Bacterial transcriptional regulator D0812_21460 PF00582 Universal stress protein family D0812_21470 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D0812_21470 PF00361 Proton-conducting membrane transporter D0812_21470 PF13244 Domain of unknown function (DUF4040) D0812_21470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D0812_21475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D0812_21490 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D0812_21495 PF03334 Na+/H+ antiporter subunit D0812_21500 PF02322 Cytochrome bd terminal oxidase subunit II D0812_21505 PF01654 Cytochrome bd terminal oxidase subunit I D0812_21515 PF03466 LysR substrate binding domain D0812_21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21525 PF01551 Peptidase family M23 D0812_21525 PF01476 LysM domain D0812_21525 PF08525 Opacity-associated protein A N-terminal motif D0812_21560 PF01594 AI-2E family transporter D0812_21565 PF02311 AraC-like ligand binding domain D0812_21565 PF12833 Helix-turn-helix domain D0812_21580 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ D0812_21590 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D0812_21595 PF08240 Alcohol dehydrogenase GroES-like domain D0812_21595 PF00107 Zinc-binding dehydrogenase D0812_21600 PF00378 Enoyl-CoA hydratase/isomerase D0812_21620 PF07883 Cupin domain D0812_21620 PF12833 Helix-turn-helix domain D0812_21635 PF01569 PAP2 superfamily D0812_21690 PF00005 ABC transporter D0812_21690 PF00664 ABC transporter transmembrane region D0812_21715 PF03466 LysR substrate binding domain D0812_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_21720 PF17848 Acetyl-coA carboxylase zinc finger domain D0812_21720 PF01039 Carboxyl transferase domain D0812_21735 PF07690 Major Facilitator Superfamily D0812_21770 PF02347 Glycine cleavage system P-protein D0812_21775 PF01597 Glycine cleavage H-protein D0812_21780 PF00464 Serine hydroxymethyltransferase D0812_21795 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0812_21795 PF01571 Aminomethyltransferase folate-binding domain D0812_21805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_21810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_21815 PF00873 AcrB/AcrD/AcrF family D0812_21840 PF02378 Phosphotransferase system, EIIC D0812_21840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_21845 PF00294 pfkB family carbohydrate kinase D0812_21850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_21850 PF00381 PTS HPr component phosphorylation site D0812_21855 PF00356 Bacterial regulatory proteins, lacI family D0812_21855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0812_21870 PF01590 GAF domain D0812_21870 PF00563 EAL domain D0812_21870 PF00990 Diguanylate cyclase, GGDEF domain D0812_21870 PF00989 PAS fold D0812_21875 PF00528 Binding-protein-dependent transport system inner membrane component D0812_21880 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0812_21910 PF05063 MT-A70 D0812_21940 PF10065 Uncharacterized conserved protein (DUF2303) D0812_21965 PF01695 IstB-like ATP binding protein D0812_22230 PF00528 Binding-protein-dependent transport system inner membrane component D0812_22235 PF00005 ABC transporter D0812_22245 PF00465 Iron-containing alcohol dehydrogenase D0812_22250 PF06719 AraC-type transcriptional regulator N-terminus D0812_22250 PF12833 Helix-turn-helix domain D0812_22255 PF00704 Glycosyl hydrolases family 18 D0812_22255 PF06483 Chitinase C D0812_22260 PF00483 Nucleotidyl transferase D0812_22265 PF01268 Formate--tetrahydrofolate ligase D0812_22270 PF00294 pfkB family carbohydrate kinase D0812_22285 PF11849 Domain of unknown function (DUF3369) D0812_22290 PF13419 Haloacid dehalogenase-like hydrolase D0812_22300 PF12729 Four helix bundle sensory module for signal transduction D0812_22300 PF00672 HAMP domain D0812_22300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_22310 PF04336 Acyl carrier protein phosphodiesterase D0812_22315 PF00271 Helicase conserved C-terminal domain D0812_22315 PF00270 DEAD/DEAH box helicase D0812_22320 PF12792 CSS motif domain associated with EAL D0812_22320 PF00563 EAL domain D0812_22335 PF01292 Prokaryotic cytochrome b561 D0812_22340 PF04264 YceI-like domain D0812_22345 PF01226 Formate/nitrite transporter D0812_22355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_22355 PF03466 LysR substrate binding domain D0812_22360 PF06496 Protein of unknown function (DUF1097) D0812_22365 PF11398 Protein of unknown function (DUF2813) D0812_22370 PF02872 5'-nucleotidase, C-terminal domain D0812_22370 PF00149 Calcineurin-like phosphoesterase D0812_22375 PF03741 Integral membrane protein TerC family D0812_22390 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0812_22390 PF00809 Pterin binding enzyme D0812_22390 PF02574 Homocysteine S-methyltransferase D0812_22390 PF02310 B12 binding domain D0812_22390 PF02607 B12 binding domain D0812_22405 PF12262 Bacterial virulence factor lipase N-terminal D0812_22410 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0812_22425 PF03061 Thioesterase superfamily D0812_22435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_22435 PF12793 Sugar transport-related sRNA regulator N-term D0812_22460 PF00684 DnaJ central domain D0812_22460 PF01556 DnaJ C terminal domain D0812_22460 PF00226 DnaJ domain D0812_22470 PF00563 EAL domain D0812_22470 PF00990 Diguanylate cyclase, GGDEF domain D0812_22470 PF13188 PAS domain D0812_22470 PF03707 Bacterial signalling protein N terminal repeat D0812_22475 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0812_22475 PF07055 Enoyl reductase FAD binding domain D0812_22475 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0812_22480 PF13472 GDSL-like Lipase/Acylhydrolase family D0812_22485 PF00005 ABC transporter D0812_22500 PF02626 Carboxyltransferase domain, subdomain A and B D0812_22505 PF02682 Carboxyltransferase domain, subdomain C and D D0812_22510 PF03746 LamB/YcsF family D0812_22515 PF13426 PAS domain D0812_22515 PF08448 PAS fold D0812_22515 PF05231 MASE1 D0812_22515 PF00990 Diguanylate cyclase, GGDEF domain D0812_22515 PF08447 PAS fold D0812_22515 PF00563 EAL domain D0812_22520 PF16363 GDP-mannose 4,6 dehydratase D0812_22530 PF04886 PT repeat D0812_22530 PF07715 TonB-dependent Receptor Plug Domain D0812_22530 PF00593 TonB dependent receptor D0812_22535 PF03466 LysR substrate binding domain D0812_22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_22540 PF00583 Acetyltransferase (GNAT) family D0812_22540 PF13380 CoA binding domain D0812_22540 PF13607 Succinyl-CoA ligase like flavodoxin domain D0812_22545 PF05036 Sporulation related domain D0812_22550 PF01820 D-ala D-ala ligase N-terminus D0812_22550 PF07478 D-ala D-ala ligase C-terminus D0812_22560 PF01253 Translation initiation factor SUI1 D0812_22580 PF03701 Uncharacterised protein family (UPF0181) D0812_22595 PF00072 Response regulator receiver domain D0812_22595 PF00486 Transcriptional regulatory protein, C terminal D0812_22605 PF02233 NAD(P) transhydrogenase beta subunit D0812_22610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0812_22610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0812_22610 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0812_22635 PF00072 Response regulator receiver domain D0812_22635 PF00990 Diguanylate cyclase, GGDEF domain D0812_22650 PF00563 EAL domain D0812_22650 PF01590 GAF domain D0812_22650 PF00990 Diguanylate cyclase, GGDEF domain D0812_22650 PF00360 Phytochrome region D0812_22660 PF03459 TOBE domain D0812_22660 PF00005 ABC transporter D0812_22665 PF00528 Binding-protein-dependent transport system inner membrane component D0812_22675 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0812_22675 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0812_22680 PF04076 Bacterial OB fold (BOF) protein D0812_22695 PF00155 Aminotransferase class I and II D0812_22700 PF12833 Helix-turn-helix domain D0812_22705 PF01554 MatE D0812_22715 PF03477 ATP cone domain D0812_22715 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0812_22745 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_22745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0812_22795 PF07690 Major Facilitator Superfamily D0812_22800 PF00072 Response regulator receiver domain D0812_22800 PF00196 Bacterial regulatory proteins, luxR family D0812_22805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_22805 PF07730 Histidine kinase D0812_22805 PF05231 MASE1 D0812_22810 PF07690 Major Facilitator Superfamily D0812_22815 PF01238 Phosphomannose isomerase type I D0812_22825 PF01594 AI-2E family transporter D0812_22835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_22835 PF00529 HlyD membrane-fusion protein of T1SS D0812_22865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0812_22865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0812_22870 PF00085 Thioredoxin D0812_22875 PF07690 Major Facilitator Superfamily D0812_22885 PF01554 MatE D0812_22890 PF11756 Nitrous oxide-stimulated promoter D0812_22905 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0812_22920 PF10414 Sirohaem synthase dimerisation region D0812_22920 PF14824 Sirohaem biosynthesis protein central D0812_22920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_22925 PF01226 Formate/nitrite transporter D0812_22930 PF13806 Rieske-like [2Fe-2S] domain D0812_22935 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0812_22935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_22935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0812_22935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0812_22935 PF04324 BFD-like [2Fe-2S] binding domain D0812_22940 PF01156 Inosine-uridine preferring nucleoside hydrolase D0812_22945 PF00990 Diguanylate cyclase, GGDEF domain D0812_22945 PF17152 Periplasmic sensor domain D0812_23000 PF09154 Domain of unknown function (DUF1939) D0812_23000 PF00128 Alpha amylase, catalytic domain D0812_23020 PF01565 FAD binding domain D0812_23020 PF09330 D-lactate dehydrogenase, membrane binding D0812_23025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_23025 PF03466 LysR substrate binding domain D0812_23030 PF14310 Fibronectin type III-like domain D0812_23030 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0812_23030 PF00933 Glycosyl hydrolase family 3 N terminal domain D0812_23045 PF05762 VWA domain containing CoxE-like protein D0812_23050 PF07728 AAA domain (dynein-related subfamily) D0812_23050 PF12592 Protein of unknown function (DUF3763) D0812_23050 PF17868 AAA lid domain D0812_23060 PF01212 Beta-eliminating lyase D0812_23065 PF00034 Cytochrome c D0812_23070 PF03606 C4-dicarboxylate anaerobic carrier D0812_23080 PF07690 Major Facilitator Superfamily D0812_23090 PF08212 Lipocalin-like domain D0812_23125 PF14706 Transposase DNA-binding D0812_23125 PF01609 Transposase DDE domain D0812_23125 PF02281 Transposase Tn5 dimerisation domain D0812_23130 PF00704 Glycosyl hydrolases family 18 D0812_23140 PF13476 AAA domain D0812_23145 PF12320 Type 5 capsule protein repressor C-terminal domain D0812_23145 PF00149 Calcineurin-like phosphoesterase D0812_23170 PF04717 Type VI secretion system, phage-baseplate injector D0812_23180 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_23180 PF00004 ATPase family associated with various cellular activities (AAA) D0812_23180 PF07724 AAA domain (Cdc48 subfamily) D0812_23180 PF17871 AAA lid domain D0812_23240 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0812_23240 PF00691 OmpA family D0812_23260 PF00069 Protein kinase domain D0812_23260 PF03793 PASTA domain D0812_23300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_23305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_23315 PF01757 Acyltransferase family D0812_23330 PF13187 4Fe-4S dicluster domain D0812_23330 PF01645 Conserved region in glutamate synthase D0812_23340 PF00753 Metallo-beta-lactamase superfamily D0812_23345 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0812_23355 PF00171 Aldehyde dehydrogenase family D0812_23375 PF00892 EamA-like transporter family D0812_23380 PF00893 Small Multidrug Resistance protein D0812_23395 PF01569 PAP2 superfamily D0812_23410 PF00892 EamA-like transporter family D0812_23420 PF08334 Type II secretion system (T2SS), protein G D0812_23420 PF07963 Prokaryotic N-terminal methylation motif D0812_23425 PF01584 CheW-like domain D0812_23425 PF00072 Response regulator receiver domain D0812_23430 PF00881 Nitroreductase family D0812_23440 PF00196 Bacterial regulatory proteins, luxR family D0812_23440 PF00072 Response regulator receiver domain D0812_23445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_23445 PF03466 LysR substrate binding domain D0812_23450 PF00990 Diguanylate cyclase, GGDEF domain D0812_23455 PF00072 Response regulator receiver domain D0812_23455 PF00196 Bacterial regulatory proteins, luxR family D0812_23460 PF00563 EAL domain D0812_23460 PF13188 PAS domain D0812_23460 PF00990 Diguanylate cyclase, GGDEF domain D0812_23460 PF03707 Bacterial signalling protein N terminal repeat D0812_23465 PF09456 RcsC Alpha-Beta-Loop (ABL) D0812_23465 PF00072 Response regulator receiver domain D0812_23465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_23465 PF00512 His Kinase A (phospho-acceptor) domain D0812_23470 PF00990 Diguanylate cyclase, GGDEF domain D0812_23470 PF00563 EAL domain D0812_23470 PF03707 Bacterial signalling protein N terminal repeat D0812_23480 PF07715 TonB-dependent Receptor Plug Domain D0812_23480 PF00593 TonB dependent receptor D0812_23535 PF01037 Lrp/AsnC ligand binding domain D0812_23570 PF00069 Protein kinase domain D0812_23595 PF04717 Type VI secretion system, phage-baseplate injector D0812_23600 PF05638 Type VI secretion system effector, Hcp D0812_23605 PF10431 C-terminal, D2-small domain, of ClpB protein D0812_23605 PF17871 AAA lid domain D0812_23605 PF07724 AAA domain (Cdc48 subfamily) D0812_23605 PF00004 ATPase family associated with various cellular activities (AAA) D0812_23610 PF00158 Sigma-54 interaction domain D0812_23610 PF02954 Bacterial regulatory protein, Fis family D0812_23615 PF00691 OmpA family D0812_23635 PF01476 LysM domain D0812_23635 PF08525 Opacity-associated protein A N-terminal motif D0812_23635 PF01551 Peptidase family M23 D0812_23640 PF01926 50S ribosome-binding GTPase D0812_23645 PF00155 Aminotransferase class I and II D0812_23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_23650 PF00072 Response regulator receiver domain D0812_23670 PF03606 C4-dicarboxylate anaerobic carrier D0812_23675 PF04011 LemA family D0812_23680 PF01435 Peptidase family M48 D0812_23700 PF08774 VRR-NUC domain D0812_23700 PF18081 Fanconi anemia-associated nuclease SAP domain D0812_23710 PF04055 Radical SAM superfamily D0812_23710 PF13186 Iron-sulfur cluster-binding domain D0812_23715 PF03781 Sulfatase-modifying factor enzyme 1 D0812_23730 PF04076 Bacterial OB fold (BOF) protein D0812_23735 PF00781 Diacylglycerol kinase catalytic domain D0812_23740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_23740 PF03466 LysR substrate binding domain D0812_23745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0812_23745 PF01872 RibD C-terminal domain D0812_23750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0812_23750 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0812_23755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_23755 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0812_23760 PF00231 ATP synthase D0812_23765 PF00306 ATP synthase alpha/beta chain, C terminal domain D0812_23765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0812_23765 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0812_23770 PF00213 ATP synthase delta (OSCP) subunit D0812_23775 PF00430 ATP synthase B/B' CF(0) D0812_23780 PF00137 ATP synthase subunit C D0812_23785 PF00119 ATP synthase A chain D0812_23805 PF00092 von Willebrand factor type A domain D0812_23820 PF17863 AAA lid domain D0812_23820 PF07726 ATPase family associated with various cellular activities (AAA) D0812_23830 PF00884 Sulfatase D0812_23835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_23835 PF03466 LysR substrate binding domain D0812_23845 PF00884 Sulfatase D0812_23850 PF00884 Sulfatase D0812_23855 PF00884 Sulfatase D0812_23860 PF00486 Transcriptional regulatory protein, C terminal D0812_23860 PF00072 Response regulator receiver domain D0812_23865 PF00672 HAMP domain D0812_23865 PF00512 His Kinase A (phospho-acceptor) domain D0812_23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_23865 PF16750 Sensor domain of 2-component histidine kinase D0812_23885 PF00512 His Kinase A (phospho-acceptor) domain D0812_23885 PF01627 Hpt domain D0812_23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_23885 PF00672 HAMP domain D0812_23885 PF00072 Response regulator receiver domain D0812_23890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0812_23895 PF02142 MGS-like domain D0812_23900 PF00580 UvrD/REP helicase N-terminal domain D0812_23900 PF13361 UvrD-like helicase C-terminal domain D0812_23900 PF12462 DNA helicase IV / RNA helicase N terminal D0812_23905 PF12805 FUSC-like inner membrane protein yccS D0812_23940 PF00593 TonB dependent receptor D0812_23940 PF07715 TonB-dependent Receptor Plug Domain D0812_23945 PF02311 AraC-like ligand binding domain D0812_23945 PF12833 Helix-turn-helix domain D0812_23950 PF13411 MerR HTH family regulatory protein D0812_23955 PF00005 ABC transporter D0812_23960 PF01032 FecCD transport family D0812_23965 PF01032 FecCD transport family D0812_23970 PF01497 Periplasmic binding protein D0812_23985 PF01048 Phosphorylase superfamily D0812_23990 PF04973 Nicotinamide mononucleotide transporter D0812_24000 PF00356 Bacterial regulatory proteins, lacI family D0812_24005 PF00294 pfkB family carbohydrate kinase D0812_24010 PF13407 Periplasmic binding protein domain D0812_24015 PF02653 Branched-chain amino acid transport system / permease component D0812_24020 PF00005 ABC transporter D0812_24025 PF05025 RbsD / FucU transport protein family D0812_24030 PF00990 Diguanylate cyclase, GGDEF domain D0812_24030 PF00563 EAL domain D0812_24035 PF01048 Phosphorylase superfamily D0812_24040 PF01177 Asp/Glu/Hydantoin racemase D0812_24045 PF00293 NUDIX domain D0812_24050 PF00293 NUDIX domain D0812_24070 PF09335 SNARE associated Golgi protein D0812_24090 PF00486 Transcriptional regulatory protein, C terminal D0812_24090 PF00072 Response regulator receiver domain D0812_24100 PF00072 Response regulator receiver domain D0812_24105 PF00672 HAMP domain D0812_24105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_24105 PF00512 His Kinase A (phospho-acceptor) domain D0812_24105 PF00072 Response regulator receiver domain D0812_24105 PF01627 Hpt domain D0812_24105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0812_24125 PF04116 Fatty acid hydroxylase superfamily D0812_24135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_24135 PF03466 LysR substrate binding domain D0812_24145 PF09308 LuxQ, periplasmic D0812_24145 PF00072 Response regulator receiver domain D0812_24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_24145 PF00512 His Kinase A (phospho-acceptor) domain D0812_24150 PF03150 Di-haem cytochrome c peroxidase D0812_24150 PF00034 Cytochrome c D0812_24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_24155 PF00072 Response regulator receiver domain D0812_24155 PF00512 His Kinase A (phospho-acceptor) domain D0812_24155 PF09456 RcsC Alpha-Beta-Loop (ABL) D0812_24160 PF00989 PAS fold D0812_24160 PF01590 GAF domain D0812_24160 PF00563 EAL domain D0812_24160 PF00990 Diguanylate cyclase, GGDEF domain D0812_24190 PF01145 SPFH domain / Band 7 family D0812_24190 PF16200 C-terminal region of band_7 D0812_24200 PF00881 Nitroreductase family D0812_24220 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0812_24245 PF00483 Nucleotidyl transferase D0812_24260 PF03600 Citrate transporter D0812_24260 PF02080 TrkA-C domain D0812_24270 PF03808 Glycosyl transferase WecB/TagA/CpsF family D0812_24285 PF13439 Glycosyltransferase Family 4 D0812_24305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0812_24305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0812_24305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0812_24310 PF02350 UDP-N-acetylglucosamine 2-epimerase D0812_24315 PF00009 Elongation factor Tu GTP binding domain D0812_24320 PF01507 Phosphoadenosine phosphosulfate reductase family D0812_24325 PF13807 G-rich domain on putative tyrosine kinase D0812_24325 PF13614 AAA domain D0812_24325 PF02706 Chain length determinant protein D0812_24330 PF10531 SLBB domain D0812_24330 PF02563 Polysaccharide biosynthesis/export protein D0812_24330 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0812_24335 PF02397 Bacterial sugar transferase D0812_24340 PF00005 ABC transporter D0812_24340 PF00571 CBS domain D0812_24345 PF00528 Binding-protein-dependent transport system inner membrane component D0812_24350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0812_24355 PF00732 GMC oxidoreductase D0812_24355 PF05199 GMC oxidoreductase D0812_24360 PF00171 Aldehyde dehydrogenase family D0812_24365 PF13977 BetI-type transcriptional repressor, C-terminal D0812_24365 PF00440 Bacterial regulatory proteins, tetR family D0812_24370 PF00171 Aldehyde dehydrogenase family D0812_24375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0812_24375 PF12833 Helix-turn-helix domain D0812_24380 PF00990 Diguanylate cyclase, GGDEF domain D0812_24380 PF07694 5TMR of 5TMR-LYT D0812_24420 PF13737 Transposase DDE domain D0812_24425 PF02264 LamB porin D0812_24430 PF08533 Beta-galactosidase C-terminal domain D0812_24430 PF02449 Beta-galactosidase D0812_24430 PF08532 Beta-galactosidase trimerisation domain D0812_24435 PF07745 Glycosyl hydrolase family 53 D0812_24440 PF00528 Binding-protein-dependent transport system inner membrane component D0812_24445 PF00528 Binding-protein-dependent transport system inner membrane component D0812_24450 PF13416 Bacterial extracellular solute-binding protein D0812_24460 PF00005 ABC transporter D0812_24460 PF17912 MalK OB fold domain D0812_24470 PF13737 Transposase DDE domain D0812_24475 PF00356 Bacterial regulatory proteins, lacI family D0812_24480 PF01263 Aldose 1-epimerase D0812_24485 PF08544 GHMP kinases C terminal D0812_24485 PF10509 Galactokinase galactose-binding signature D0812_24485 PF00288 GHMP kinases N terminal domain D0812_24490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0812_24490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0812_24495 PF16363 GDP-mannose 4,6 dehydratase D0812_24510 PF07690 Major Facilitator Superfamily D0812_24515 PF00440 Bacterial regulatory proteins, tetR family D0812_24515 PF02909 Tetracyclin repressor-like, C-terminal domain D0812_24550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_24550 PF00672 HAMP domain D0812_24550 PF17200 Single Cache domain 2 D0812_24570 PF01420 Type I restriction modification DNA specificity domain D0812_24575 PF02384 N-6 DNA Methylase D0812_24575 PF12161 HsdM N-terminal domain D0812_24585 PF00158 Sigma-54 interaction domain D0812_24585 PF02954 Bacterial regulatory protein, Fis family D0812_24585 PF00072 Response regulator receiver domain D0812_24620 PF04851 Type III restriction enzyme, res subunit D0812_24630 PF09299 Mu transposase, C-terminal D0812_24630 PF00665 Integrase core domain D0812_24640 PF00478 IMP dehydrogenase / GMP reductase domain D0812_24645 PF01256 Carbohydrate kinase D0812_24645 PF03853 YjeF-related protein N-terminus D0812_24655 PF00072 Response regulator receiver domain D0812_24660 PF00248 Aldo/keto reductase family D0812_24675 PF00654 Voltage gated chloride channel D0812_24685 PF01566 Natural resistance-associated macrophage protein D0812_24695 PF01227 GTP cyclohydrolase I D0812_24700 PF03454 MoeA C-terminal region (domain IV) D0812_24700 PF03453 MoeA N-terminal region (domain I and II) D0812_24700 PF00994 Probable molybdopterin binding domain D0812_24705 PF00899 ThiF family D0812_24725 PF00581 Rhodanese-like domain D0812_24730 PF03707 Bacterial signalling protein N terminal repeat D0812_24730 PF00990 Diguanylate cyclase, GGDEF domain D0812_24730 PF00563 EAL domain D0812_24735 PF08329 Chitinase A, N-terminal domain D0812_24735 PF00704 Glycosyl hydrolases family 18 D0812_24750 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0812_24755 PF02779 Transketolase, pyrimidine binding domain D0812_24755 PF02780 Transketolase, C-terminal domain D0812_24755 PF00456 Transketolase, thiamine diphosphate binding domain D0812_24760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_24760 PF08447 PAS fold D0812_24765 PF07690 Major Facilitator Superfamily D0812_24770 PF00793 DAHP synthetase I family D0812_24775 PF00691 OmpA family D0812_24775 PF01389 OmpA-like transmembrane domain D0812_24780 PF01040 UbiA prenyltransferase family D0812_24785 PF02628 Cytochrome oxidase assembly protein D0812_24805 PF00510 Cytochrome c oxidase subunit III D0812_24810 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D0812_24815 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0812_24820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0812_24820 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D0812_24825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0812_24825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0812_24825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0812_24825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0812_24835 PF01810 LysE type translocator D0812_24855 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0812_24870 PF00892 EamA-like transporter family D0812_24875 PF00462 Glutaredoxin D0812_24890 PF07690 Major Facilitator Superfamily D0812_24895 PF03466 LysR substrate binding domain D0812_24895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_24900 PF01032 FecCD transport family D0812_24910 PF07715 TonB-dependent Receptor Plug Domain D0812_24910 PF00593 TonB dependent receptor D0812_24915 PF12833 Helix-turn-helix domain D0812_24925 PF00005 ABC transporter D0812_24930 PF00990 Diguanylate cyclase, GGDEF domain D0812_24930 PF08448 PAS fold D0812_24930 PF00563 EAL domain D0812_24930 PF08447 PAS fold D0812_24935 PF01476 LysM domain D0812_24935 PF08525 Opacity-associated protein A N-terminal motif D0812_24935 PF01551 Peptidase family M23 D0812_24965 PF02743 Cache domain D0812_24965 PF00672 HAMP domain D0812_24965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_24975 PF03222 Tryptophan/tyrosine permease family D0812_25010 PF00107 Zinc-binding dehydrogenase D0812_25010 PF08240 Alcohol dehydrogenase GroES-like domain D0812_25015 PF02378 Phosphotransferase system, EIIC D0812_25015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_25020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_25025 PF00392 Bacterial regulatory proteins, gntR family D0812_25025 PF07702 UTRA domain D0812_25030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_25030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0812_25030 PF02378 Phosphotransferase system, EIIC D0812_25035 PF07748 Glycosyl hydrolases family 38 C-terminal domain D0812_25035 PF01074 Glycosyl hydrolases family 38 N-terminal domain D0812_25035 PF09261 Alpha mannosidase middle domain D0812_25040 PF01238 Phosphomannose isomerase type I D0812_25045 PF03928 Haem-degrading D0812_25050 PF00248 Aldo/keto reductase family D0812_25055 PF03466 LysR substrate binding domain D0812_25055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25070 PF01638 HxlR-like helix-turn-helix D0812_25085 PF01758 Sodium Bile acid symporter family D0812_25100 PF01161 Phosphatidylethanolamine-binding protein D0812_25105 PF02567 Phenazine biosynthesis-like protein D0812_25110 PF01042 Endoribonuclease L-PSP D0812_25115 PF10282 Lactonase, 7-bladed beta-propeller D0812_25120 PF00728 Glycosyl hydrolase family 20, catalytic domain D0812_25120 PF02838 Glycosyl hydrolase family 20, domain 2 D0812_25130 PF01081 KDPG and KHG aldolase D0812_25135 PF00294 pfkB family carbohydrate kinase D0812_25140 PF00474 Sodium:solute symporter family D0812_25150 PF07969 Amidohydrolase family D0812_25160 PF02685 Glucokinase D0812_25160 PF01418 Helix-turn-helix domain, rpiR family D0812_25160 PF01380 SIS domain D0812_25165 PF00672 HAMP domain D0812_25165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_25175 PF00005 ABC transporter D0812_25195 PF12838 4Fe-4S dicluster domain D0812_25195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0812_25195 PF00384 Molybdopterin oxidoreductase D0812_25195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0812_25195 PF01568 Molydopterin dinucleotide binding domain D0812_25215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_25220 PF00873 AcrB/AcrD/AcrF family D0812_25245 PF00550 Phosphopantetheine attachment site D0812_25245 PF08659 KR domain D0812_25245 PF16197 Ketoacyl-synthetase C-terminal extension D0812_25245 PF00698 Acyl transferase domain D0812_25245 PF14765 Polyketide synthase dehydratase D0812_25245 PF02801 Beta-ketoacyl synthase, C-terminal domain D0812_25245 PF00109 Beta-ketoacyl synthase, N-terminal domain D0812_25245 PF08240 Alcohol dehydrogenase GroES-like domain D0812_25265 PF00293 NUDIX domain D0812_25280 PF00034 Cytochrome c D0812_25280 PF03150 Di-haem cytochrome c peroxidase D0812_25280 PF14376 Haem-binding domain D0812_25290 PF13302 Acetyltransferase (GNAT) domain D0812_25300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0812_25310 PF00326 Prolyl oligopeptidase family D0812_25310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0812_25315 PF12848 ABC transporter D0812_25315 PF00005 ABC transporter D0812_25315 PF16326 ABC transporter C-terminal domain D0812_25320 PF01980 tRNA-methyltransferase O D0812_25340 PF00582 Universal stress protein family D0812_25350 PF08220 DeoR-like helix-turn-helix domain D0812_25350 PF00455 DeoR C terminal sensor domain D0812_25355 PF03009 Glycerophosphoryl diester phosphodiesterase family D0812_25360 PF13416 Bacterial extracellular solute-binding protein D0812_25365 PF00528 Binding-protein-dependent transport system inner membrane component D0812_25370 PF00528 Binding-protein-dependent transport system inner membrane component D0812_25375 PF00005 ABC transporter D0812_25375 PF17912 MalK OB fold domain D0812_25395 PF01047 MarR family D0812_25415 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0812_25415 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0812_25420 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_25425 PF01979 Amidohydrolase family D0812_25435 PF01734 Patatin-like phospholipase D0812_25445 PF02678 Pirin D0812_25445 PF05726 Pirin C-terminal cupin domain D0812_25450 PF00313 'Cold-shock' DNA-binding domain D0812_25465 PF00962 Adenosine/AMP deaminase D0812_25470 PF17151 Periplasmic sensor domain D0812_25470 PF00990 Diguanylate cyclase, GGDEF domain D0812_25475 PF03466 LysR substrate binding domain D0812_25475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25490 PF08534 Redoxin D0812_25490 PF00462 Glutaredoxin D0812_25495 PF08241 Methyltransferase domain D0812_25505 PF08448 PAS fold D0812_25505 PF00990 Diguanylate cyclase, GGDEF domain D0812_25510 PF07943 Penicillin-binding protein 5, C-terminal domain D0812_25510 PF00768 D-alanyl-D-alanine carboxypeptidase D0812_25515 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_25520 PF02525 Flavodoxin-like fold D0812_25525 PF03466 LysR substrate binding domain D0812_25525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25530 PF02798 Glutathione S-transferase, N-terminal domain D0812_25540 PF01872 RibD C-terminal domain D0812_25590 PF00106 short chain dehydrogenase D0812_25600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25600 PF03466 LysR substrate binding domain D0812_25605 PF12833 Helix-turn-helix domain D0812_25605 PF01497 Periplasmic binding protein D0812_25610 PF00155 Aminotransferase class I and II D0812_25640 PF00270 DEAD/DEAH box helicase D0812_25640 PF00271 Helicase conserved C-terminal domain D0812_25650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25650 PF03466 LysR substrate binding domain D0812_25670 PF03466 LysR substrate binding domain D0812_25670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25680 PF07690 Major Facilitator Superfamily D0812_25690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0812_25705 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0812_25710 PF03466 LysR substrate binding domain D0812_25710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25730 PF03466 LysR substrate binding domain D0812_25745 PF13185 GAF domain D0812_25745 PF00990 Diguanylate cyclase, GGDEF domain D0812_25745 PF00563 EAL domain D0812_25750 PF00710 Asparaginase, N-terminal D0812_25750 PF17763 Glutaminase/Asparaginase C-terminal domain D0812_25755 PF03618 Kinase/pyrophosphorylase D0812_25760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0812_25760 PF02896 PEP-utilising enzyme, TIM barrel domain D0812_25760 PF00391 PEP-utilising enzyme, mobile domain D0812_25770 PF00196 Bacterial regulatory proteins, luxR family D0812_25770 PF00072 Response regulator receiver domain D0812_25775 PF00579 tRNA synthetases class I (W and Y) D0812_25785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25785 PF03466 LysR substrate binding domain D0812_25815 PF03466 LysR substrate binding domain D0812_25815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25825 PF03466 LysR substrate binding domain D0812_25830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_25835 PF00873 AcrB/AcrD/AcrF family D0812_25840 PF02321 Outer membrane efflux protein D0812_25845 PF02600 Disulfide bond formation protein DsbB D0812_25850 PF03616 Sodium/glutamate symporter D0812_25865 PF00563 EAL domain D0812_25865 PF03707 Bacterial signalling protein N terminal repeat D0812_25865 PF00990 Diguanylate cyclase, GGDEF domain D0812_25875 PF00196 Bacterial regulatory proteins, luxR family D0812_25880 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0812_25880 PF00703 Glycosyl hydrolases family 2 D0812_25880 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D0812_25880 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0812_25885 PF02028 BCCT, betaine/carnitine/choline family transporter D0812_25890 PF00501 AMP-binding enzyme D0812_25890 PF13193 AMP-binding enzyme C-terminal domain D0812_25910 PF00873 AcrB/AcrD/AcrF family D0812_25925 PF00873 AcrB/AcrD/AcrF family D0812_25930 PF13533 Biotin-lipoyl like D0812_25935 PF13091 PLD-like domain D0812_25965 PF00376 MerR family regulatory protein D0812_25965 PF09278 MerR, DNA binding D0812_25980 PF08244 Glycosyl hydrolases family 32 C terminal D0812_25980 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0812_25985 PF02378 Phosphotransferase system, EIIC D0812_25985 PF00367 phosphotransferase system, EIIB D0812_25990 PF07702 UTRA domain D0812_25990 PF00392 Bacterial regulatory proteins, gntR family D0812_25995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_25995 PF03466 LysR substrate binding domain D0812_26005 PF13378 Enolase C-terminal domain-like D0812_26005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0812_26015 PF00679 Elongation factor G C-terminus D0812_26015 PF14492 Elongation Factor G, domain II D0812_26015 PF03144 Elongation factor Tu domain 2 D0812_26015 PF00009 Elongation factor Tu GTP binding domain D0812_26015 PF03764 Elongation factor G, domain IV D0812_26025 PF03707 Bacterial signalling protein N terminal repeat D0812_26025 PF00563 EAL domain D0812_26025 PF00990 Diguanylate cyclase, GGDEF domain D0812_26050 PF02001 Protein of unknown function DUF134 D0812_26060 PF00528 Binding-protein-dependent transport system inner membrane component D0812_26065 PF00571 CBS domain D0812_26065 PF00005 ABC transporter D0812_26080 PF01048 Phosphorylase superfamily D0812_26085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26085 PF03466 LysR substrate binding domain D0812_26110 PF06942 GlpM protein D0812_26125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0812_26125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0812_26135 PF00857 Isochorismatase family D0812_26140 PF00080 Copper/zinc superoxide dismutase (SODC) D0812_26150 PF06628 Catalase-related immune-responsive D0812_26150 PF00199 Catalase D0812_26170 PF01238 Phosphomannose isomerase type I D0812_26175 PF00155 Aminotransferase class I and II D0812_26180 PF00367 phosphotransferase system, EIIB D0812_26180 PF02378 Phosphotransferase system, EIIC D0812_26185 PF00356 Bacterial regulatory proteins, lacI family D0812_26185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0812_26190 PF08220 DeoR-like helix-turn-helix domain D0812_26190 PF00455 DeoR C terminal sensor domain D0812_26195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_26200 PF01641 SelR domain D0812_26200 PF01625 Peptide methionine sulfoxide reductase D0812_26220 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0812_26220 PF07971 Glycosyl hydrolase family 92 D0812_26225 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0812_26225 PF07971 Glycosyl hydrolase family 92 D0812_26235 PF07971 Glycosyl hydrolase family 92 D0812_26235 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0812_26240 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0812_26240 PF07971 Glycosyl hydrolase family 92 D0812_26245 PF02872 5'-nucleotidase, C-terminal domain D0812_26245 PF00149 Calcineurin-like phosphoesterase D0812_26270 PF03466 LysR substrate binding domain D0812_26270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26275 PF01810 LysE type translocator D0812_26280 PF00581 Rhodanese-like domain D0812_26295 PF00440 Bacterial regulatory proteins, tetR family D0812_26295 PF13977 BetI-type transcriptional repressor, C-terminal D0812_26310 PF03466 LysR substrate binding domain D0812_26310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26325 PF12848 ABC transporter D0812_26325 PF00005 ABC transporter D0812_26340 PF03358 NADPH-dependent FMN reductase D0812_26345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26345 PF03466 LysR substrate binding domain D0812_26350 PF09905 DNA-binding protein VF530 D0812_26355 PF00005 ABC transporter D0812_26355 PF12848 ABC transporter D0812_26370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_26375 PF02567 Phenazine biosynthesis-like protein D0812_26390 PF05114 Protein of unknown function (DUF692) D0812_26405 PF01654 Cytochrome bd terminal oxidase subunit I D0812_26410 PF02322 Cytochrome bd terminal oxidase subunit II D0812_26430 PF00293 NUDIX domain D0812_26430 PF13344 Haloacid dehalogenase-like hydrolase D0812_26445 PF00561 alpha/beta hydrolase fold D0812_26450 PF12852 Cupin D0812_26450 PF12833 Helix-turn-helix domain D0812_26455 PF12833 Helix-turn-helix domain D0812_26455 PF17853 GGDEF-like domain D0812_26470 PF04055 Radical SAM superfamily D0812_26475 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0812_26490 PF00672 HAMP domain D0812_26490 PF00512 His Kinase A (phospho-acceptor) domain D0812_26490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_26495 PF00072 Response regulator receiver domain D0812_26495 PF00486 Transcriptional regulatory protein, C terminal D0812_26505 PF00583 Acetyltransferase (GNAT) family D0812_26510 PF03952 Enolase, N-terminal domain D0812_26510 PF00113 Enolase, C-terminal TIM barrel domain D0812_26520 PF07690 Major Facilitator Superfamily D0812_26525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26525 PF03466 LysR substrate binding domain D0812_26535 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0812_26545 PF00892 EamA-like transporter family D0812_26565 PF13533 Biotin-lipoyl like D0812_26575 PF01594 AI-2E family transporter D0812_26580 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0812_26595 PF00970 Oxidoreductase FAD-binding domain D0812_26595 PF00175 Oxidoreductase NAD-binding domain D0812_26605 PF09905 DNA-binding protein VF530 D0812_26610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26610 PF03466 LysR substrate binding domain D0812_26620 PF00881 Nitroreductase family D0812_26630 PF00128 Alpha amylase, catalytic domain D0812_26630 PF00686 Starch binding domain D0812_26635 PF00768 D-alanyl-D-alanine carboxypeptidase D0812_26635 PF07943 Penicillin-binding protein 5, C-terminal domain D0812_26640 PF00561 alpha/beta hydrolase fold D0812_26655 PF00268 Ribonucleotide reductase, small chain D0812_26660 PF03477 ATP cone domain D0812_26660 PF02867 Ribonucleotide reductase, barrel domain D0812_26660 PF00317 Ribonucleotide reductase, all-alpha domain D0812_26685 PF00875 DNA photolyase D0812_26685 PF03441 FAD binding domain of DNA photolyase D0812_26690 PF02469 Fasciclin domain D0812_26700 PF01734 Patatin-like phospholipase D0812_26705 PF01914 MarC family integral membrane protein D0812_26715 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0812_26715 PF10531 SLBB domain D0812_26715 PF02563 Polysaccharide biosynthesis/export protein D0812_26720 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0812_26725 PF13614 AAA domain D0812_26725 PF13807 G-rich domain on putative tyrosine kinase D0812_26725 PF02706 Chain length determinant protein D0812_26735 PF08803 Putative mono-oxygenase ydhR D0812_26740 PF03466 LysR substrate binding domain D0812_26740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_26745 PF07690 Major Facilitator Superfamily D0812_26775 PF00375 Sodium:dicarboxylate symporter family D0812_26780 PF06803 Protein of unknown function (DUF1232) D0812_26785 PF07687 Peptidase dimerisation domain D0812_26785 PF01546 Peptidase family M20/M25/M40 D0812_26790 PF07670 Nucleoside recognition D0812_26795 PF07670 Nucleoside recognition D0812_26810 PF00128 Alpha amylase, catalytic domain D0812_26820 PF00912 Transglycosylase D0812_26825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0812_26825 PF00128 Alpha amylase, catalytic domain D0812_26825 PF02806 Alpha amylase, C-terminal all-beta domain D0812_26830 PF02446 4-alpha-glucanotransferase D0812_26835 PF00343 Carbohydrate phosphorylase D0812_26840 PF17874 MalT-like TPR region D0812_26840 PF00196 Bacterial regulatory proteins, luxR family D0812_26855 PF02630 SCO1/SenC D0812_26865 PF02378 Phosphotransferase system, EIIC D0812_26865 PF00367 phosphotransferase system, EIIB D0812_26865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0812_26870 PF03193 RsgA GTPase D0812_26875 PF00375 Sodium:dicarboxylate symporter family D0812_26880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0812_26880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0812_26895 PF01116 Fructose-bisphosphate aldolase class-II D0812_26905 PF00294 pfkB family carbohydrate kinase D0812_26910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0812_26910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0812_26915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0812_26915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0812_26915 PF00205 Thiamine pyrophosphate enzyme, central domain D0812_26920 PF01261 Xylose isomerase-like TIM barrel D0812_26925 PF00083 Sugar (and other) transporter D0812_26945 PF00108 Thiolase, N-terminal domain D0812_26945 PF02803 Thiolase, C-terminal domain D0812_26950 PF01144 Coenzyme A transferase D0812_26955 PF01144 Coenzyme A transferase D0812_26965 PF08543 Phosphomethylpyrimidine kinase D0812_26975 PF13520 Amino acid permease D0812_26980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0812_26980 PF01276 Orn/Lys/Arg decarboxylase, major domain D0812_26980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0812_26995 PF17967 Pullulanase N2 domain D0812_26995 PF18494 Pullulanase Ins domain D0812_26995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0812_26995 PF03714 Bacterial pullanase-associated domain D0812_26995 PF11852 Domain of unknown function (DUF3372) D0812_27000 PF04231 Endonuclease I D0812_27010 PF02903 Alpha amylase, N-terminal ig-like domain D0812_27010 PF16657 Maltogenic Amylase, C-terminal domain D0812_27010 PF00128 Alpha amylase, catalytic domain D0812_27025 PF02264 LamB porin D0812_27030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0812_27030 PF00128 Alpha amylase, catalytic domain D0812_27035 PF00990 Diguanylate cyclase, GGDEF domain D0812_27040 PF10414 Sirohaem synthase dimerisation region D0812_27040 PF14824 Sirohaem biosynthesis protein central D0812_27040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0812_27045 PF17179 4Fe-4S dicluster domain D0812_27050 PF00175 Oxidoreductase NAD-binding domain D0812_27050 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D0812_27055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0812_27055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0812_27055 PF13187 4Fe-4S dicluster domain D0812_27070 PF00356 Bacterial regulatory proteins, lacI family D0812_27075 PF00367 phosphotransferase system, EIIB D0812_27075 PF02378 Phosphotransferase system, EIIC D0812_27085 PF03315 Serine dehydratase beta chain D0812_27085 PF03313 Serine dehydratase alpha chain D0812_27090 PF00474 Sodium:solute symporter family D0812_27095 PF07690 Major Facilitator Superfamily D0812_27110 PF00356 Bacterial regulatory proteins, lacI family D0812_27115 PF02796 Helix-turn-helix domain of resolvase D0812_27115 PF00239 Resolvase, N terminal domain D0812_27120 PF07690 Major Facilitator Superfamily D0812_27125 PF06224 Winged helix DNA-binding domain D0812_27130 PF00892 EamA-like transporter family D0812_27135 PF07715 TonB-dependent Receptor Plug Domain D0812_27135 PF00593 TonB dependent receptor D0812_27140 PF03466 LysR substrate binding domain D0812_27140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_27145 PF01497 Periplasmic binding protein D0812_27155 PF01032 FecCD transport family D0812_27160 PF01032 FecCD transport family D0812_27165 PF00005 ABC transporter D0812_27170 PF08360 QacR-like protein, C-terminal region D0812_27170 PF00440 Bacterial regulatory proteins, tetR family D0812_27180 PF13533 Biotin-lipoyl like D0812_27195 PF04225 Opacity-associated protein A LysM-like domain D0812_27195 PF01551 Peptidase family M23 D0812_27210 PF01081 KDPG and KHG aldolase D0812_27215 PF00294 pfkB family carbohydrate kinase D0812_27220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0812_27220 PF02378 Phosphotransferase system, EIIC D0812_27220 PF00367 phosphotransferase system, EIIB D0812_27225 PF13378 Enolase C-terminal domain-like D0812_27225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0812_27230 PF07702 UTRA domain D0812_27230 PF00392 Bacterial regulatory proteins, gntR family D0812_27235 PF00128 Alpha amylase, catalytic domain D0812_27240 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0812_27240 PF08244 Glycosyl hydrolases family 32 C terminal D0812_27250 PF00005 ABC transporter D0812_27250 PF08402 TOBE domain D0812_27255 PF13419 Haloacid dehalogenase-like hydrolase D0812_27260 PF03636 Glycosyl hydrolase family 65, N-terminal domain D0812_27260 PF03632 Glycosyl hydrolase family 65 central catalytic domain D0812_27260 PF03633 Glycosyl hydrolase family 65, C-terminal domain D0812_27265 PF00528 Binding-protein-dependent transport system inner membrane component D0812_27280 PF00356 Bacterial regulatory proteins, lacI family D0812_27300 PF02753 Pili assembly chaperone PapD, C-terminal domain D0812_27300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0812_27305 PF13954 PapC N-terminal domain D0812_27305 PF13953 PapC C-terminal domain D0812_27305 PF00577 Outer membrane usher protein D0812_27335 PF05193 Peptidase M16 inactive domain D0812_27335 PF00675 Insulinase (Peptidase family M16) D0812_27340 PF17200 Single Cache domain 2 D0812_27340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_27340 PF00672 HAMP domain D0812_27385 PF13401 AAA domain D0812_27385 PF09077 Mu B transposition protein, C terminal D0812_27415 PF04245 37-kD nucleoid-associated bacterial protein D0812_27470 PF01520 N-acetylmuramoyl-L-alanine amidase D0812_27470 PF01471 Putative peptidoglycan binding domain D0812_27585 PF01555 DNA methylase D0812_27615 PF00248 Aldo/keto reductase family D0812_27625 PF02525 Flavodoxin-like fold D0812_27630 PF12796 Ankyrin repeats (3 copies) D0812_27635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_27635 PF03466 LysR substrate binding domain D0812_27645 PF00005 ABC transporter D0812_27695 PF02566 OsmC-like protein D0812_27700 PF01047 MarR family D0812_27705 PF00578 AhpC/TSA family D0812_27705 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0812_27710 PF13192 Thioredoxin domain D0812_27710 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0812_27730 PF00392 Bacterial regulatory proteins, gntR family D0812_27730 PF07702 UTRA domain D0812_27735 PF07690 Major Facilitator Superfamily D0812_27740 PF00294 pfkB family carbohydrate kinase D0812_27745 PF03747 ADP-ribosylglycohydrolase D0812_27750 PF03825 Nucleoside H+ symporter D0812_27770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_27775 PF00672 HAMP domain D0812_27775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_27775 PF12729 Four helix bundle sensory module for signal transduction D0812_27785 PF06445 GyrI-like small molecule binding domain D0812_27790 PF01810 LysE type translocator D0812_27795 PF01037 Lrp/AsnC ligand binding domain D0812_27795 PF13404 AsnC-type helix-turn-helix domain D0812_27810 PF03473 MOSC domain D0812_27810 PF03475 3-alpha domain D0812_27815 PF00356 Bacterial regulatory proteins, lacI family D0812_27820 PF03553 Na+/H+ antiporter family D0812_27825 PF00155 Aminotransferase class I and II D0812_27830 PF00271 Helicase conserved C-terminal domain D0812_27830 PF00270 DEAD/DEAH box helicase D0812_27845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_27845 PF03466 LysR substrate binding domain D0812_27850 PF04542 Sigma-70 region 2 D0812_27850 PF08281 Sigma-70, region 4 D0812_27860 PF00155 Aminotransferase class I and II D0812_27865 PF03786 D-mannonate dehydratase (UxuA) D0812_27870 PF07729 FCD domain D0812_27870 PF00392 Bacterial regulatory proteins, gntR family D0812_27875 PF03480 Bacterial extracellular solute-binding protein, family 7 D0812_27880 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0812_27885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0812_27890 PF08125 Mannitol dehydrogenase C-terminal domain D0812_27890 PF01232 Mannitol dehydrogenase Rossmann domain D0812_27895 PF02614 Glucuronate isomerase D0812_27900 PF00294 pfkB family carbohydrate kinase D0812_27905 PF01081 KDPG and KHG aldolase D0812_27910 PF10688 Bacterial inner membrane protein D0812_27915 PF00440 Bacterial regulatory proteins, tetR family D0812_27920 PF00696 Amino acid kinase family D0812_27925 PF13520 Amino acid permease D0812_27930 PF04371 Porphyromonas-type peptidyl-arginine deiminase D0812_27935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0812_27935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0812_27940 PF01042 Endoribonuclease L-PSP D0812_27945 PF11924 Inverse autotransporter, beta-domain D0812_27945 PF02369 Bacterial Ig-like domain (group 1) D0812_27945 PF02368 Bacterial Ig-like domain (group 2) D0812_27945 PF07979 Intimin C-type lectin domain D0812_27945 PF01476 LysM domain D0812_27955 PF00005 ABC transporter D0812_27955 PF00664 ABC transporter transmembrane region D0812_27965 PF01037 Lrp/AsnC ligand binding domain D0812_27980 PF00300 Histidine phosphatase superfamily (branch 1) D0812_27985 PF13302 Acetyltransferase (GNAT) domain D0812_28005 PF00474 Sodium:solute symporter family D0812_28015 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0812_28015 PF14850 DNA-binding domain of Proline dehydrogenase D0812_28015 PF01619 Proline dehydrogenase D0812_28015 PF00171 Aldehyde dehydrogenase family D0812_28020 PF12833 Helix-turn-helix domain D0812_28030 PF01243 Pyridoxamine 5'-phosphate oxidase D0812_28030 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0812_28035 PF02743 Cache domain D0812_28035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_28035 PF00512 His Kinase A (phospho-acceptor) domain D0812_28040 PF00158 Sigma-54 interaction domain D0812_28040 PF02954 Bacterial regulatory protein, Fis family D0812_28040 PF00072 Response regulator receiver domain D0812_28060 PF03412 Peptidase C39 family D0812_28060 PF00664 ABC transporter transmembrane region D0812_28060 PF00005 ABC transporter D0812_28070 PF03358 NADPH-dependent FMN reductase D0812_28075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0812_28080 PF00246 Zinc carboxypeptidase D0812_28085 PF01380 SIS domain D0812_28085 PF01418 Helix-turn-helix domain, rpiR family D0812_28090 PF01380 SIS domain D0812_28095 PF02378 Phosphotransferase system, EIIC D0812_28095 PF00367 phosphotransferase system, EIIB D0812_28100 PF00267 Gram-negative porin D0812_28110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28110 PF03466 LysR substrate binding domain D0812_28115 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_28125 PF13718 GNAT acetyltransferase 2 D0812_28125 PF05127 Helicase D0812_28130 PF08775 ParB family D0812_28130 PF02195 ParB-like nuclease domain D0812_28135 PF18607 ParA helix turn helix domain D0812_28135 PF13614 AAA domain D0812_28160 PF00005 ABC transporter D0812_28160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_28165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0812_28165 PF00005 ABC transporter D0812_28175 PF08719 Domain of unknown function (DUF1768) D0812_28175 PF00925 GTP cyclohydrolase II D0812_28185 PF00672 HAMP domain D0812_28185 PF17149 Periplasmic sensor domain found in signal transduction proteins D0812_28185 PF00512 His Kinase A (phospho-acceptor) domain D0812_28185 PF01627 Hpt domain D0812_28185 PF00072 Response regulator receiver domain D0812_28185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_28195 PF01709 Transcriptional regulator D0812_28200 PF01098 Cell cycle protein D0812_28215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0812_28220 PF03466 LysR substrate binding domain D0812_28220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28230 PF00005 ABC transporter D0812_28250 PF06580 Histidine kinase D0812_28250 PF07694 5TMR of 5TMR-LYT D0812_28250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0812_28250 PF13492 GAF domain D0812_28255 PF00072 Response regulator receiver domain D0812_28255 PF04397 LytTr DNA-binding domain D0812_28265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0812_28270 PF00672 HAMP domain D0812_28270 PF17200 Single Cache domain 2 D0812_28270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0812_28285 PF00132 Bacterial transferase hexapeptide (six repeats) D0812_28290 PF03616 Sodium/glutamate symporter D0812_28305 PF00005 ABC transporter D0812_28310 PF00392 Bacterial regulatory proteins, gntR family D0812_28310 PF00155 Aminotransferase class I and II D0812_28315 PF03616 Sodium/glutamate symporter D0812_28335 PF12833 Helix-turn-helix domain D0812_28340 PF02386 Cation transport protein D0812_28385 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0812_28395 PF12833 Helix-turn-helix domain D0812_28400 PF00005 ABC transporter D0812_28410 PF01032 FecCD transport family D0812_28430 PF01042 Endoribonuclease L-PSP D0812_28435 PF14760 Rnk N-terminus D0812_28435 PF01272 Transcription elongation factor, GreA/GreB, C-term D0812_28440 PF12833 Helix-turn-helix domain D0812_28445 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0812_28455 PF00194 Eukaryotic-type carbonic anhydrase D0812_28465 PF00455 DeoR C terminal sensor domain D0812_28465 PF08220 DeoR-like helix-turn-helix domain D0812_28470 PF03611 PTS system sugar-specific permease component D0812_28475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0812_28480 PF00596 Class II Aldolase and Adducin N-terminal domain D0812_28490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0812_28495 PF01261 Xylose isomerase-like TIM barrel D0812_28515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0812_28530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28530 PF03466 LysR substrate binding domain D0812_28535 PF02678 Pirin D0812_28535 PF17954 Quercetinase C-terminal cupin domain D0812_28540 PF07681 DoxX D0812_28550 PF00730 HhH-GPD superfamily base excision DNA repair protein D0812_28550 PF06029 AlkA N-terminal domain D0812_28555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0812_28555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0812_28565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0812_28575 PF03600 Citrate transporter D0812_28680 PF08329 Chitinase A, N-terminal domain D0812_28680 PF00704 Glycosyl hydrolases family 18 D0812_28690 PF06865 Pyrimidine/purine nucleoside phosphorylase D0812_28700 PF00990 Diguanylate cyclase, GGDEF domain D0812_28700 PF00563 EAL domain D0812_28705 PF02264 LamB porin D0812_28710 PF00356 Bacterial regulatory proteins, lacI family D0812_28720 PF00528 Binding-protein-dependent transport system inner membrane component D0812_28725 PF00528 Binding-protein-dependent transport system inner membrane component D0812_28730 PF00232 Glycosyl hydrolase family 1 D0812_28735 PF17912 MalK OB fold domain D0812_28735 PF00005 ABC transporter D0812_28740 PF00356 Bacterial regulatory proteins, lacI family D0812_28745 PF01554 MatE D0812_28750 PF00849 RNA pseudouridylate synthase D0812_28775 PF00990 Diguanylate cyclase, GGDEF domain D0812_28775 PF17152 Periplasmic sensor domain D0812_28785 PF05656 Protein of unknown function (DUF805) D0812_28795 PF00756 Putative esterase D0812_28800 PF08240 Alcohol dehydrogenase GroES-like domain D0812_28800 PF00107 Zinc-binding dehydrogenase D0812_28805 PF00797 N-acetyltransferase D0812_28820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28820 PF03466 LysR substrate binding domain D0812_28830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28830 PF03466 LysR substrate binding domain D0812_28835 PF08021 Siderophore-interacting FAD-binding domain D0812_28835 PF04954 Siderophore-interacting protein D0812_28840 PF00326 Prolyl oligopeptidase family D0812_28845 PF01810 LysE type translocator D0812_28850 PF01037 Lrp/AsnC ligand binding domain D0812_28855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0812_28855 PF18416 N-acetylglucosamine binding protein domain 2 D0812_28865 PF00893 Small Multidrug Resistance protein D0812_28880 PF13599 Pentapeptide repeats (9 copies) D0812_28885 PF03922 OmpW family D0812_28890 PF16868 NMT1-like family D0812_28900 PF13533 Biotin-lipoyl like D0812_28905 PF07690 Major Facilitator Superfamily D0812_28915 PF12706 Beta-lactamase superfamily domain D0812_28925 PF01204 Trehalase D0812_28940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0812_28955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28955 PF03466 LysR substrate binding domain D0812_28960 PF03974 Ecotin D0812_28980 PF03466 LysR substrate binding domain D0812_28980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0812_28995 PF07670 Nucleoside recognition D0812_28995 PF01773 Na+ dependent nucleoside transporter N-terminus D0812_28995 PF07662 Na+ dependent nucleoside transporter C-terminus D0812_29005 PF13419 Haloacid dehalogenase-like hydrolase D0812_29030 PF01979 Amidohydrolase family D0812_29055 PF08775 ParB family D0812_29055 PF02195 ParB-like nuclease domain D0812_29060 PF13614 AAA domain D0812_29085 PF04956 TrbC/VIRB2 family D0812_29090 PF05101 Type IV secretory pathway, VirB3-like protein D0812_29095 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0812_29105 PF00437 Type II/IV secretion system protein D0812_29125 PF03524 Conjugal transfer protein D0812_29135 PF03743 Bacterial conjugation TrbI-like protein D0812_29160 PF00437 Type II/IV secretion system protein D0812_29200 PF01848 Hok/gef family D0812_29205 PF10502 Signal peptidase, peptidase S26 D0812_29260 PF01751 Toprim domain D0812_29260 PF01131 DNA topoisomerase D0812_29300 PF13362 Toprim domain D0812_29300 PF08401 Domain of unknown function (DUF1738) D0812_29300 PF18818 Metallopeptidase superfamily domain D0812_29330 PF00239 Resolvase, N terminal domain D0812_29330 PF02796 Helix-turn-helix domain of resolvase D0812_29340 PF00905 Penicillin binding protein transpeptidase domain D0812_29340 PF03717 Penicillin-binding Protein dimerisation domain D0812_29345 PF02796 Helix-turn-helix domain of resolvase D0812_29345 PF00239 Resolvase, N terminal domain D0812_29375 PF13614 AAA domain D0812_29410 PF04956 TrbC/VIRB2 family D0812_29415 PF05101 Type IV secretory pathway, VirB3-like protein D0812_29420 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0812_29430 PF00437 Type II/IV secretion system protein D0812_29445 PF02796 Helix-turn-helix domain of resolvase D0812_29445 PF00239 Resolvase, N terminal domain D0812_29490 PF08525 Opacity-associated protein A N-terminal motif D0812_29490 PF01551 Peptidase family M23 D0812_29490 PF01476 LysM domain D0812_29505 PF02954 Bacterial regulatory protein, Fis family D0812_29525 PF11999 Protein of unknown function (DUF3494) D0812_29525 PF02368 Bacterial Ig-like domain (group 2) D0812_29550 PF00589 Phage integrase family D0812_29550 PF02899 Phage integrase, N-terminal SAM-like domain D0812_29560 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D0812_29615 PF00691 OmpA family D0812_29645 PF00691 OmpA family D0812_29645 PF01389 OmpA-like transmembrane domain D0812_29650 PF11999 Protein of unknown function (DUF3494) D0812_29650 PF02368 Bacterial Ig-like domain (group 2) D0812_29670 PF01131 DNA topoisomerase D0812_29670 PF01751 Toprim domain D0812_29725 PF01464 Transglycosylase SLT domain D0812_29750 PF01848 Hok/gef family D0812_29790 PF00437 Type II/IV secretion system protein D0812_29815 PF03743 Bacterial conjugation TrbI-like protein D0812_29825 PF03524 Conjugal transfer protein D0812_29840 PF00437 Type II/IV secretion system protein D0812_29850 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0812_29855 PF05101 Type IV secretory pathway, VirB3-like protein D0812_29860 PF04956 TrbC/VIRB2 family D0812_29880 PF04754 Putative transposase, YhgA-like D0812_29885 PF13614 AAA domain D0812_29910 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system D0812_29935 PF13737 Transposase DDE domain D0812_29965 PF13737 Transposase DDE domain D0812_29970 PF07669 Eco57I restriction-modification methylase D0812_29970 PF02384 N-6 DNA Methylase D0812_30005 PF01848 Hok/gef family