locus-tag class description D0856_00010 PF03937 Flavinator of succinate dehydrogenase D0856_00020 PF00890 FAD binding domain D0856_00020 PF02910 Fumarate reductase flavoprotein C-term D0856_00030 PF08281 Sigma-70, region 4 D0856_00030 PF04542 Sigma-70 region 2 D0856_00035 PF03873 Anti sigma-E protein RseA, C-terminal domain D0856_00035 PF03872 Anti sigma-E protein RseA, N-terminal domain D0856_00040 PF03888 MucB/RseB N-terminal domain D0856_00040 PF17188 MucB/RseB C-terminal domain D0856_00050 PF06421 GTP-binding protein LepA C-terminus D0856_00050 PF03144 Elongation factor Tu domain 2 D0856_00050 PF00009 Elongation factor Tu GTP binding domain D0856_00050 PF00679 Elongation factor G C-terminus D0856_00055 PF10502 Signal peptidase, peptidase S26 D0856_00060 PF14622 Ribonuclease-III-like D0856_00060 PF00035 Double-stranded RNA binding motif D0856_00065 PF01926 50S ribosome-binding GTPase D0856_00065 PF07650 KH domain D0856_00070 PF11967 Recombination protein O N terminal D0856_00070 PF02565 Recombination protein O C terminal D0856_00075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0856_00080 PF01648 4'-phosphopantetheinyl transferase superfamily D0856_00085 PF01627 Hpt domain D0856_00085 PF00072 Response regulator receiver domain D0856_00085 PF00672 HAMP domain D0856_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_00085 PF00512 His Kinase A (phospho-acceptor) domain D0856_00085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0856_00095 PF05958 tRNA (Uracil-5-)-methyltransferase D0856_00095 PF01938 TRAM domain D0856_00100 PF13291 ACT domain D0856_00100 PF04607 Region found in RelA / SpoT proteins D0856_00100 PF02824 TGS domain D0856_00105 PF03819 MazG nucleotide pyrophosphohydrolase domain D0856_00110 PF06418 CTP synthase N-terminus D0856_00110 PF00117 Glutamine amidotransferase class-I D0856_00115 PF03952 Enolase, N-terminal domain D0856_00115 PF00113 Enolase, C-terminal TIM barrel domain D0856_00120 PF04977 Septum formation initiator D0856_00125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0856_00130 PF02542 YgbB family D0856_00135 PF01142 tRNA pseudouridine synthase D (TruD) D0856_00140 PF01975 Survival protein SurE D0856_00155 PF04545 Sigma-70, region 4 D0856_00155 PF00140 Sigma-70 factor, region 1.2 D0856_00155 PF04542 Sigma-70 region 2 D0856_00155 PF04539 Sigma-70 region 3 D0856_00165 PF02464 Competence-damaged protein D0856_00170 PF00154 recA bacterial DNA recombination protein D0856_00175 PF02631 RecX family D0856_00180 PF02272 DHHA1 domain D0856_00180 PF01411 tRNA synthetases class II (A) D0856_00180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0856_00185 PF01842 ACT domain D0856_00185 PF00696 Amino acid kinase family D0856_00185 PF13840 ACT domain D0856_00190 PF02599 Global regulator protein family D0856_00270 PF00196 Bacterial regulatory proteins, luxR family D0856_00275 PF04277 Oxaloacetate decarboxylase, gamma chain D0856_00280 PF02436 Conserved carboxylase domain D0856_00280 PF00682 HMGL-like D0856_00280 PF00364 Biotin-requiring enzyme D0856_00285 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0856_00295 PF09335 SNARE associated Golgi protein D0856_00300 PF00675 Insulinase (Peptidase family M16) D0856_00300 PF05193 Peptidase M16 inactive domain D0856_00305 PF04262 Glutamate-cysteine ligase D0856_00315 PF02664 S-Ribosylhomocysteinase (LuxS) D0856_00320 PF01595 Cyclin M transmembrane N-terminal domain D0856_00320 PF00571 CBS domain D0856_00320 PF03471 Transporter associated domain D0856_00325 PF01578 Cytochrome C assembly protein D0856_00330 PF02978 Signal peptide binding domain D0856_00330 PF00448 SRP54-type protein, GTPase domain D0856_00330 PF02881 SRP54-type protein, helical bundle domain D0856_00335 PF00886 Ribosomal protein S16 D0856_00340 PF05239 PRC-barrel domain D0856_00340 PF01782 RimM N-terminal domain D0856_00345 PF01746 tRNA (Guanine-1)-methyltransferase D0856_00350 PF01245 Ribosomal protein L19 D0856_00355 PF03884 DNA gyrase inhibitor YacG D0856_00360 PF07072 Cell division protein D0856_00365 PF01121 Dephospho-CoA kinase D0856_00370 PF01478 Type IV leader peptidase family D0856_00370 PF06750 Bacterial Peptidase A24 N-terminal domain D0856_00375 PF00482 Type II secretion system (T2SS), protein F D0856_00380 PF00437 Type II/IV secretion system protein D0856_00380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0856_00385 PF00114 Pilin (bacterial filament) D0856_00385 PF07963 Prokaryotic N-terminal methylation motif D0856_00390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0856_00390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0856_00395 PF01510 N-acetylmuramoyl-L-alanine amidase D0856_00400 PF07729 FCD domain D0856_00400 PF00392 Bacterial regulatory proteins, gntR family D0856_00405 PF00456 Transketolase, thiamine diphosphate binding domain D0856_00405 PF17831 Pyruvate dehydrogenase E1 component middle domain D0856_00410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0856_00410 PF00364 Biotin-requiring enzyme D0856_00410 PF02817 e3 binding domain D0856_00415 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_00415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_00420 PF00440 Bacterial regulatory proteins, tetR family D0856_00425 PF00156 Phosphoribosyl transferase domain D0856_00430 PF00484 Carbonic anhydrase D0856_00435 PF00916 Sulfate permease family D0856_00435 PF01740 STAS domain D0856_00440 PF00005 ABC transporter D0856_00445 PF01061 ABC-2 type transporter D0856_00450 PF03279 Bacterial lipid A biosynthesis acyltransferase D0856_00455 PF02569 Pantoate-beta-alanine ligase D0856_00460 PF02548 Ketopantoate hydroxymethyltransferase D0856_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0856_00470 PF01743 Poly A polymerase head domain D0856_00470 PF12626 Polymerase A arginine-rich C-terminus D0856_00470 PF12627 Probable RNA and SrmB- binding site of polymerase A D0856_00475 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0856_00480 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0856_00485 PF17746 SfsA N-terminal OB domain D0856_00485 PF03749 Sugar fermentation stimulation protein RE domain D0856_00490 PF00271 Helicase conserved C-terminal domain D0856_00490 PF04408 Helicase associated domain (HA2) D0856_00490 PF08482 ATP-dependent helicase C-terminal D0856_00490 PF00270 DEAD/DEAH box helicase D0856_00495 PF00905 Penicillin binding protein transpeptidase domain D0856_00495 PF00912 Transglycosylase D0856_00495 PF14814 Bifunctional transglycosylase second domain D0856_00500 PF01734 Patatin-like phospholipase D0856_00505 PF11791 Aconitate B N-terminal domain D0856_00505 PF06434 Aconitate hydratase 2 N-terminus D0856_00505 PF00330 Aconitase family (aconitate hydratase) D0856_00515 PF06062 Uncharacterised protein family (UPF0231) D0856_00520 PF00543 Nitrogen regulatory protein P-II D0856_00525 PF00909 Ammonium Transporter Family D0856_00530 PF13416 Bacterial extracellular solute-binding protein D0856_00540 PF00005 ABC transporter D0856_00540 PF08402 TOBE domain D0856_00545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0856_00545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0856_00545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0856_00550 PF06165 Glycosyltransferase family 36 D0856_00550 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0856_00555 PF00728 Glycosyl hydrolase family 20, catalytic domain D0856_00555 PF02838 Glycosyl hydrolase family 20, domain 2 D0856_00560 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0856_00570 PF00005 ABC transporter D0856_00570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_00575 PF00005 ABC transporter D0856_00575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_00580 PF00528 Binding-protein-dependent transport system inner membrane component D0856_00580 PF12911 N-terminal TM domain of oligopeptide transport permease C D0856_00585 PF00528 Binding-protein-dependent transport system inner membrane component D0856_00590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_00595 PF00512 His Kinase A (phospho-acceptor) domain D0856_00595 PF00072 Response regulator receiver domain D0856_00595 PF09308 LuxQ, periplasmic D0856_00605 PF08468 Methyltransferase small domain N-terminal D0856_00605 PF05175 Methyltransferase small domain D0856_00610 PF01594 AI-2E family transporter D0856_00620 PF00202 Aminotransferase class-III D0856_00625 PF01521 Iron-sulphur cluster biosynthesis D0856_00630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_00635 PF00873 AcrB/AcrD/AcrF family D0856_00640 PF01476 LysM domain D0856_00640 PF08525 Opacity-associated protein A N-terminal motif D0856_00640 PF01551 Peptidase family M23 D0856_00645 PF00579 tRNA synthetases class I (W and Y) D0856_00655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0856_00660 PF13609 Gram-negative porin D0856_00665 PF01272 Transcription elongation factor, GreA/GreB, C-term D0856_00665 PF03449 Transcription elongation factor, N-terminal D0856_00670 PF01985 CRS1 / YhbY (CRM) domain D0856_00675 PF01728 FtsJ-like methyltransferase D0856_00680 PF00004 ATPase family associated with various cellular activities (AAA) D0856_00680 PF17862 AAA+ lid domain D0856_00680 PF06480 FtsH Extracellular D0856_00680 PF01434 Peptidase family M41 D0856_00685 PF00809 Pterin binding enzyme D0856_00690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0856_00690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0856_00690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0856_00690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0856_00695 PF03840 Preprotein translocase SecG subunit D0856_00710 PF17384 RimP C-terminal SH3 domain D0856_00710 PF02576 RimP N-terminal domain D0856_00715 PF13184 NusA-like KH domain D0856_00715 PF00575 S1 RNA binding domain D0856_00715 PF08529 NusA N-terminal domain D0856_00725 PF02033 Ribosome-binding factor A D0856_00730 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0856_00730 PF09157 Pseudouridine synthase II TruB, C-terminal D0856_00730 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0856_00735 PF00312 Ribosomal protein S15 D0856_00740 PF00013 KH domain D0856_00740 PF00575 S1 RNA binding domain D0856_00740 PF03725 3' exoribonuclease family, domain 2 D0856_00740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0856_00740 PF01138 3' exoribonuclease family, domain 1 D0856_00745 PF07719 Tetratricopeptide repeat D0856_00745 PF13181 Tetratricopeptide repeat D0856_00755 PF01554 MatE D0856_00770 PF00990 Diguanylate cyclase, GGDEF domain D0856_00770 PF00563 EAL domain D0856_00770 PF03707 Bacterial signalling protein N terminal repeat D0856_00780 PF13508 Acetyltransferase (GNAT) domain D0856_00800 PF05230 MASE2 domain D0856_00800 PF00990 Diguanylate cyclase, GGDEF domain D0856_00805 PF03144 Elongation factor Tu domain 2 D0856_00805 PF16658 Class II release factor RF3, C-terminal domain D0856_00805 PF00009 Elongation factor Tu GTP binding domain D0856_00810 PF01381 Helix-turn-helix D0856_00815 PF13657 HipA N-terminal domain D0856_00815 PF07804 HipA-like C-terminal domain D0856_00885 PF00440 Bacterial regulatory proteins, tetR family D0856_00885 PF02909 Tetracyclin repressor-like, C-terminal domain D0856_00895 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase D0856_00900 PF01636 Phosphotransferase enzyme family D0856_00905 PF00809 Pterin binding enzyme D0856_00925 PF00817 impB/mucB/samB family D0856_00925 PF11799 impB/mucB/samB family C-terminal domain D0856_00925 PF13438 Domain of unknown function (DUF4113) D0856_00930 PF00717 Peptidase S24-like D0856_00940 PF00929 Exonuclease D0856_00940 PF14579 Helix-hairpin-helix motif D0856_00940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0856_00940 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0856_00940 PF02811 PHP domain D0856_00940 PF11490 DNA polymerase III polC-type N-terminus II D0856_00955 PF01555 DNA methylase D0856_00955 PF18273 Type III R-M EcoP15I C-terminal domain D0856_01005 PF05973 Phage derived protein Gp49-like (DUF891) D0856_01065 PF00158 Sigma-54 interaction domain D0856_01065 PF02954 Bacterial regulatory protein, Fis family D0856_01065 PF00072 Response regulator receiver domain D0856_01070 PF10411 Disulfide bond isomerase protein N-terminus D0856_01070 PF13098 Thioredoxin-like domain D0856_01085 PF10502 Signal peptidase, peptidase S26 D0856_01095 PF06834 TraU protein D0856_01100 PF06986 Type-1V conjugative transfer system mating pair stabilisation D0856_01125 PF00436 Single-strand binding protein family D0856_01140 PF07728 AAA domain (dynein-related subfamily) D0856_01160 PF00092 von Willebrand factor type A domain D0856_01165 PF04002 RadC-like JAB domain D0856_01210 PF06122 Conjugative relaxosome accessory transposon protein D0856_01255 PF00717 Peptidase S24-like D0856_01255 PF01381 Helix-turn-helix D0856_01260 PF00009 Elongation factor Tu GTP binding domain D0856_01260 PF03144 Elongation factor Tu domain 2 D0856_01260 PF16658 Class II release factor RF3, C-terminal domain D0856_01265 PF01026 TatD related DNase D0856_01270 PF07670 Nucleoside recognition D0856_01270 PF01773 Na+ dependent nucleoside transporter N-terminus D0856_01270 PF07662 Na+ dependent nucleoside transporter C-terminus D0856_01275 PF01791 DeoC/LacD family aldolase D0856_01280 PF00591 Glycosyl transferase family, a/b domain D0856_01280 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0856_01280 PF02885 Glycosyl transferase family, helical bundle domain D0856_01285 PF01676 Metalloenzyme superfamily D0856_01290 PF01048 Phosphorylase superfamily D0856_01300 PF18429 Domain of unknown function (DUF5609) D0856_01310 PF18073 Rubredoxin metal binding domain D0856_01315 PF03144 Elongation factor Tu domain 2 D0856_01315 PF03764 Elongation factor G, domain IV D0856_01315 PF14492 Elongation Factor G, domain II D0856_01315 PF00679 Elongation factor G C-terminus D0856_01315 PF00009 Elongation factor Tu GTP binding domain D0856_01320 PF03466 LysR substrate binding domain D0856_01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_01355 PF00501 AMP-binding enzyme D0856_01360 PF01464 Transglycosylase SLT domain D0856_01360 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0856_01385 PF04972 BON domain D0856_01385 PF13629 Pilus formation protein N terminal region D0856_01385 PF00263 Bacterial type II and III secretion system protein D0856_01400 PF00437 Type II/IV secretion system protein D0856_01435 PF05736 OprF membrane domain D0856_01435 PF00691 OmpA family D0856_01445 PF03466 LysR substrate binding domain D0856_01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_01450 PF01204 Trehalase D0856_01460 PF13520 Amino acid permease D0856_01465 PF04074 YhcH/YjgK/YiaL D0856_01470 PF16353 Domain of unknown function(DUF4981) D0856_01470 PF00703 Glycosyl hydrolases family 2 D0856_01470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0856_01470 PF02929 Beta galactosidase small chain D0856_01470 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0856_01475 PF00356 Bacterial regulatory proteins, lacI family D0856_01480 PF03717 Penicillin-binding Protein dimerisation domain D0856_01480 PF00905 Penicillin binding protein transpeptidase domain D0856_01490 PF16363 GDP-mannose 4,6 dehydratase D0856_01495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0856_01495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0856_01500 PF00288 GHMP kinases N terminal domain D0856_01500 PF08544 GHMP kinases C terminal D0856_01500 PF10509 Galactokinase galactose-binding signature D0856_01505 PF01263 Aldose 1-epimerase D0856_01515 PF00356 Bacterial regulatory proteins, lacI family D0856_01520 PF02378 Phosphotransferase system, EIIC D0856_01520 PF00367 phosphotransferase system, EIIB D0856_01530 PF01588 Putative tRNA binding domain D0856_01545 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0856_01545 PF01464 Transglycosylase SLT domain D0856_01550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0856_01550 PF01266 FAD dependent oxidoreductase D0856_01555 PF00455 DeoR C terminal sensor domain D0856_01555 PF08220 DeoR-like helix-turn-helix domain D0856_01560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0856_01560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0856_01565 PF00230 Major intrinsic protein D0856_01575 PF07690 Major Facilitator Superfamily D0856_01580 PF03009 Glycerophosphoryl diester phosphodiesterase family D0856_01595 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D0856_01595 PF14602 Hexapeptide repeat of succinyl-transferase D0856_01610 PF07130 YebG protein D0856_01615 PF03466 LysR substrate binding domain D0856_01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_01625 PF11893 Domain of unknown function (DUF3413) D0856_01625 PF00884 Sulfatase D0856_01630 PF17946 RecC C-terminal domain D0856_01640 PF13538 UvrD-like helicase C-terminal domain D0856_01650 PF00583 Acetyltransferase (GNAT) family D0856_01650 PF00696 Amino acid kinase family D0856_01665 PF06725 3D domain D0856_01665 PF03562 MltA specific insert domain D0856_01670 PF00899 ThiF family D0856_01675 PF02657 Fe-S metabolism associated domain D0856_01680 PF00266 Aminotransferase class-V D0856_01685 PF01965 DJ-1/PfpI family D0856_01690 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0856_01690 PF02558 Ketopantoate reductase PanE/ApbA D0856_01695 PF03502 Nucleoside-specific channel-forming protein, Tsx D0856_01715 PF04545 Sigma-70, region 4 D0856_01715 PF04542 Sigma-70 region 2 D0856_01725 PF07690 Major Facilitator Superfamily D0856_01730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0856_01740 PF05175 Methyltransferase small domain D0856_01745 PF01722 BolA-like protein D0856_01750 PF11973 NQRA C-terminal domain D0856_01750 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0856_01755 PF03116 NQR2, RnfD, RnfE family D0856_01760 PF04205 FMN-binding domain D0856_01765 PF02508 Rnf-Nqr subunit, membrane protein D0856_01770 PF02508 Rnf-Nqr subunit, membrane protein D0856_01775 PF00175 Oxidoreductase NAD-binding domain D0856_01775 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_01775 PF00970 Oxidoreductase FAD-binding domain D0856_01780 PF02424 ApbE family D0856_01790 PF00072 Response regulator receiver domain D0856_01790 PF00990 Diguanylate cyclase, GGDEF domain D0856_01795 PF11798 IMS family HHH motif D0856_01795 PF11799 impB/mucB/samB family C-terminal domain D0856_01795 PF00817 impB/mucB/samB family D0856_01800 PF00270 DEAD/DEAH box helicase D0856_01800 PF00570 HRDC domain D0856_01800 PF09382 RQC domain D0856_01800 PF16124 RecQ zinc-binding D0856_01800 PF00271 Helicase conserved C-terminal domain D0856_01805 PF03449 Transcription elongation factor, N-terminal D0856_01805 PF01272 Transcription elongation factor, GreA/GreB, C-term D0856_01815 PF00041 Fibronectin type III domain D0856_01815 PF00704 Glycosyl hydrolases family 18 D0856_01820 PF00209 Sodium:neurotransmitter symporter family D0856_01830 PF06786 Uncharacterised protein family (UPF0253) D0856_01840 PF03129 Anticodon binding domain D0856_01840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0856_01840 PF04073 Aminoacyl-tRNA editing domain D0856_01845 PF18389 TrmO C-terminal domain D0856_01845 PF01980 tRNA-methyltransferase O D0856_01850 PF01197 Ribosomal protein L31 D0856_01855 PF00444 Ribosomal protein L36 D0856_01860 PF03806 AbgT putative transporter family D0856_01870 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0856_01895 PF04287 tRNA pseudouridine synthase C D0856_01900 PF00849 RNA pseudouridylate synthase D0856_01905 PF11944 Protein of unknown function (DUF3461) D0856_01910 PF01842 ACT domain D0856_01910 PF01909 Nucleotidyltransferase domain D0856_01910 PF01966 HD domain D0856_01910 PF08335 GlnD PII-uridylyltransferase D0856_01915 PF00557 Metallopeptidase family M24 D0856_01920 PF00318 Ribosomal protein S2 D0856_01925 PF00889 Elongation factor TS D0856_01930 PF00696 Amino acid kinase family D0856_01935 PF01765 Ribosome recycling factor D0856_01940 PF01255 Putative undecaprenyl diphosphate synthase D0856_01950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0856_01950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0856_01950 PF13288 DXP reductoisomerase C-terminal domain D0856_01955 PF17820 PDZ domain D0856_01955 PF02163 Peptidase family M50 D0856_01960 PF01103 Surface antigen D0856_01960 PF07244 Surface antigen variable number repeat D0856_01965 PF03938 Outer membrane protein (OmpH-like) D0856_01975 PF07977 FabA-like domain D0856_01980 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_01980 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0856_01985 PF02684 Lipid-A-disaccharide synthetase D0856_01990 PF01351 Ribonuclease HII D0856_01995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0856_01995 PF02811 PHP domain D0856_01995 PF14579 Helix-hairpin-helix motif D0856_01995 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0856_01995 PF01336 OB-fold nucleic acid binding domain D0856_02000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0856_02005 PF09179 TilS substrate binding domain D0856_02005 PF11734 TilS substrate C-terminal domain D0856_02005 PF01171 PP-loop family D0856_02010 PF00034 Cytochrome c D0856_02015 PF00543 Nitrogen regulatory protein P-II D0856_02030 PF01464 Transglycosylase SLT domain D0856_02030 PF01476 LysM domain D0856_02035 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0856_02040 PF08241 Methyltransferase domain D0856_02045 PF00075 RNase H D0856_02050 PF00929 Exonuclease D0856_02075 PF11008 Protein of unknown function (DUF2846) D0856_02085 PF09317 Domain of unknown function (DUF1974) D0856_02085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0856_02085 PF02770 Acyl-CoA dehydrogenase, middle domain D0856_02085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0856_02090 PF13580 SIS domain D0856_02095 PF13230 Glutamine amidotransferases class-II D0856_02100 PF00551 Formyl transferase D0856_02105 PF00586 AIR synthase related protein, N-terminal domain D0856_02105 PF02769 AIR synthase related protein, C-terminal domain D0856_02115 PF00860 Permease family D0856_02130 PF03358 NADPH-dependent FMN reductase D0856_02135 PF03960 ArsC family D0856_02140 PF01435 Peptidase family M48 D0856_02140 PF13181 Tetratricopeptide repeat D0856_02150 PF01594 AI-2E family transporter D0856_02155 PF00578 AhpC/TSA family D0856_02160 PF01842 ACT domain D0856_02165 PF00701 Dihydrodipicolinate synthetase family D0856_02185 PF01546 Peptidase family M20/M25/M40 D0856_02185 PF07687 Peptidase dimerisation domain D0856_02190 PF03960 ArsC family D0856_02210 PF11143 Protein of unknown function (DUF2919) D0856_02215 PF04261 Dyp-type peroxidase family D0856_02220 PF12833 Helix-turn-helix domain D0856_02225 PF02056 Family 4 glycosyl hydrolase D0856_02225 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0856_02240 PF07196 Flagellin hook IN motif D0856_02240 PF00669 Bacterial flagellin N-terminal helical region D0856_02240 PF00700 Bacterial flagellin C-terminal helical region D0856_02250 PF07196 Flagellin hook IN motif D0856_02250 PF00669 Bacterial flagellin N-terminal helical region D0856_02250 PF00700 Bacterial flagellin C-terminal helical region D0856_02255 PF00669 Bacterial flagellin N-terminal helical region D0856_02255 PF07196 Flagellin hook IN motif D0856_02255 PF00700 Bacterial flagellin C-terminal helical region D0856_02260 PF03646 FlaG protein D0856_02265 PF07196 Flagellin hook IN motif D0856_02265 PF07195 Flagellar hook-associated protein 2 C-terminus D0856_02265 PF02465 Flagellar hook-associated protein 2 N-terminus D0856_02275 PF02561 Flagellar protein FliS D0856_02280 PF02954 Bacterial regulatory protein, Fis family D0856_02280 PF00072 Response regulator receiver domain D0856_02280 PF00158 Sigma-54 interaction domain D0856_02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_02285 PF00512 His Kinase A (phospho-acceptor) domain D0856_02290 PF00158 Sigma-54 interaction domain D0856_02290 PF00072 Response regulator receiver domain D0856_02290 PF02954 Bacterial regulatory protein, Fis family D0856_02295 PF02049 Flagellar hook-basal body complex protein FliE D0856_02300 PF01514 Secretory protein of YscJ/FliF family D0856_02300 PF08345 Flagellar M-ring protein C-terminal D0856_02305 PF01706 FliG C-terminal domain D0856_02305 PF14842 FliG N-terminal domain D0856_02305 PF14841 FliG middle domain D0856_02315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_02315 PF18269 T3SS EscN ATPase C-terminal domain D0856_02340 PF02154 Flagellar motor switch protein FliM D0856_02340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0856_02345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0856_02350 PF04347 Flagellar biosynthesis protein, FliO D0856_02355 PF00813 FliP family D0856_02360 PF01313 Bacterial export proteins, family 3 D0856_02365 PF01311 Bacterial export proteins, family 1 D0856_02370 PF01312 FlhB HrpN YscU SpaS Family D0856_02375 PF00771 FHIPEP family D0856_02380 PF00448 SRP54-type protein, GTPase domain D0856_02385 PF10609 NUBPL iron-transfer P-loop NTPase D0856_02390 PF04545 Sigma-70, region 4 D0856_02390 PF04539 Sigma-70 region 3 D0856_02390 PF04542 Sigma-70 region 2 D0856_02395 PF00072 Response regulator receiver domain D0856_02400 PF04344 Chemotaxis phosphatase, CheZ D0856_02405 PF01627 Hpt domain D0856_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_02405 PF01584 CheW-like domain D0856_02405 PF02895 Signal transducing histidine kinase, homodimeric domain D0856_02405 PF07194 P2 response regulator binding domain D0856_02410 PF01339 CheB methylesterase D0856_02410 PF00072 Response regulator receiver domain D0856_02415 PF13614 AAA domain D0856_02425 PF01584 CheW-like domain D0856_02435 PF00005 ABC transporter D0856_02440 PF03379 CcmB protein D0856_02445 PF01578 Cytochrome C assembly protein D0856_02455 PF03100 CcmE D0856_02460 PF01578 Cytochrome C assembly protein D0856_02460 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0856_02465 PF08534 Redoxin D0856_02470 PF03918 Cytochrome C biogenesis protein D0856_02475 PF03918 Cytochrome C biogenesis protein D0856_02480 PF04333 MlaA lipoprotein D0856_02485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0856_02490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0856_02500 PF04542 Sigma-70 region 2 D0856_02500 PF08281 Sigma-70, region 4 D0856_02510 PF02803 Thiolase, C-terminal domain D0856_02510 PF00108 Thiolase, N-terminal domain D0856_02515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0856_02515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0856_02515 PF00378 Enoyl-CoA hydratase/isomerase D0856_02525 PF00675 Insulinase (Peptidase family M16) D0856_02525 PF05193 Peptidase M16 inactive domain D0856_02525 PF16187 Middle or third domain of peptidase_M16 D0856_02530 PF00300 Histidine phosphatase superfamily (branch 1) D0856_02535 PF01713 Smr domain D0856_02540 PF05175 Methyltransferase small domain D0856_02545 PF01264 Chorismate synthase D0856_02550 PF03458 UPF0126 domain D0856_02555 PF04315 Elongation factor P hydroxylase D0856_02560 PF08891 YfcL protein D0856_02575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0856_02575 PF01266 FAD dependent oxidoreductase D0856_02580 PF02801 Beta-ketoacyl synthase, C-terminal domain D0856_02580 PF00109 Beta-ketoacyl synthase, N-terminal domain D0856_02590 PF11890 Domain of unknown function (DUF3410) D0856_02590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0856_02590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0856_02595 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0856_02595 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0856_02605 PF01416 tRNA pseudouridine synthase D0856_02615 PF01039 Carboxyl transferase domain D0856_02615 PF17848 Acetyl-coA carboxylase zinc finger domain D0856_02620 PF02875 Mur ligase family, glutamate ligase domain D0856_02620 PF08245 Mur ligase middle domain D0856_02625 PF05036 Sporulation related domain D0856_02630 PF02674 Colicin V production protein D0856_02635 PF00156 Phosphoribosyl transferase domain D0856_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_02640 PF03466 LysR substrate binding domain D0856_02645 PF00072 Response regulator receiver domain D0856_02655 PF04304 Protein of unknown function (DUF454) D0856_02660 PF00156 Phosphoribosyl transferase domain D0856_02665 PF12170 DNA polymerase III tau subunit V interacting with alpha D0856_02665 PF12169 DNA polymerase III subunits gamma and tau domain III D0856_02670 PF02575 YbaB/EbfC DNA-binding family D0856_02675 PF02132 RecR protein D0856_02675 PF13662 Toprim domain D0856_02680 PF00230 Major intrinsic protein D0856_02690 PF01042 Endoribonuclease L-PSP D0856_02695 PF03313 Serine dehydratase alpha chain D0856_02700 PF13309 HTH domain D0856_02700 PF08348 YheO-like PAS domain D0856_02705 PF03692 Putative zinc- or iron-chelating domain D0856_02715 PF03692 Putative zinc- or iron-chelating domain D0856_02720 PF04226 Transglycosylase associated protein D0856_02725 PF06826 Predicted Permease Membrane Region D0856_02730 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0856_02735 PF05552 Conserved TM helix D0856_02735 PF00924 Mechanosensitive ion channel D0856_02745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_02755 PF00245 Alkaline phosphatase D0856_02770 PF13847 Methyltransferase domain D0856_02775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_02775 PF08447 PAS fold D0856_02775 PF13426 PAS domain D0856_02780 PF01156 Inosine-uridine preferring nucleoside hydrolase D0856_02790 PF01263 Aldose 1-epimerase D0856_02795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0856_02795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0856_02800 PF01641 SelR domain D0856_02810 PF07023 Protein of unknown function (DUF1315) D0856_02815 PF17763 Glutaminase/Asparaginase C-terminal domain D0856_02815 PF00710 Asparaginase, N-terminal D0856_02820 PF01343 Peptidase family S49 D0856_02825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_02830 PF00881 Nitroreductase family D0856_02835 PF01131 DNA topoisomerase D0856_02835 PF01751 Toprim domain D0856_02880 PF00239 Resolvase, N terminal domain D0856_02880 PF02796 Helix-turn-helix domain of resolvase D0856_02900 PF00106 short chain dehydrogenase D0856_02905 PF00850 Histone deacetylase domain D0856_02915 PF05987 Bacterial protein of unknown function (DUF898) D0856_02930 PF11893 Domain of unknown function (DUF3413) D0856_02930 PF00884 Sulfatase D0856_02935 PF07208 Protein of unknown function (DUF1414) D0856_02940 PF04245 37-kD nucleoid-associated bacterial protein D0856_02955 PF03553 Na+/H+ antiporter family D0856_02960 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0856_02960 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0856_02965 PF00114 Pilin (bacterial filament) D0856_02965 PF07963 Prokaryotic N-terminal methylation motif D0856_02970 PF00027 Cyclic nucleotide-binding domain D0856_02970 PF00520 Ion transport protein D0856_02975 PF01914 MarC family integral membrane protein D0856_02980 PF00171 Aldehyde dehydrogenase family D0856_02980 PF00465 Iron-containing alcohol dehydrogenase D0856_02995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0856_02995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0856_03000 PF00462 Glutaredoxin D0856_03010 PF13726 Na+-H+ antiporter family D0856_03010 PF03553 Na+/H+ antiporter family D0856_03015 PF00929 Exonuclease D0856_03020 PF18393 MotY N-terminal domain D0856_03020 PF00691 OmpA family D0856_03025 PF10952 Protein of unknown function (DUF2753) D0856_03030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_03035 PF01548 Transposase D0856_03035 PF02371 Transposase IS116/IS110/IS902 family D0856_03040 PF13361 UvrD-like helicase C-terminal domain D0856_03040 PF00580 UvrD/REP helicase N-terminal domain D0856_03045 PF02463 RecF/RecN/SMC N terminal domain D0856_03045 PF06470 SMC proteins Flexible Hinge Domain D0856_03090 PF13340 Putative transposase of IS4/5 family (DUF4096) D0856_03100 PF00691 OmpA family D0856_03150 PF10576 Iron-sulfur binding domain of endonuclease III D0856_03150 PF00633 Helix-hairpin-helix motif D0856_03150 PF00730 HhH-GPD superfamily base excision DNA repair protein D0856_03155 PF02508 Rnf-Nqr subunit, membrane protein D0856_03160 PF04205 FMN-binding domain D0856_03165 PF03116 NQR2, RnfD, RnfE family D0856_03170 PF12838 4Fe-4S dicluster domain D0856_03170 PF13375 RnfC Barrel sandwich hybrid domain D0856_03170 PF10531 SLBB domain D0856_03170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0856_03175 PF04060 Putative Fe-S cluster D0856_03180 PF02508 Rnf-Nqr subunit, membrane protein D0856_03185 PF02901 Pyruvate formate lyase-like D0856_03185 PF01228 Glycine radical D0856_03200 PF02151 UvrB/uvrC motif D0856_03200 PF12344 Ultra-violet resistance protein B D0856_03200 PF17757 UvrB interaction domain D0856_03200 PF00271 Helicase conserved C-terminal domain D0856_03200 PF04851 Type III restriction enzyme, res subunit D0856_03205 PF00072 Response regulator receiver domain D0856_03205 PF00158 Sigma-54 interaction domain D0856_03205 PF02954 Bacterial regulatory protein, Fis family D0856_03210 PF01627 Hpt domain D0856_03215 PF01933 Uncharacterised protein family UPF0052 D0856_03225 PF00994 Probable molybdopterin binding domain D0856_03230 PF01967 MoaC family D0856_03235 PF02597 ThiS family D0856_03240 PF02391 MoaE protein D0856_03245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_03250 PF00528 Binding-protein-dependent transport system inner membrane component D0856_03255 PF00528 Binding-protein-dependent transport system inner membrane component D0856_03255 PF12911 N-terminal TM domain of oligopeptide transport permease C D0856_03260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_03260 PF00005 ABC transporter D0856_03265 PF00005 ABC transporter D0856_03265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_03270 PF13409 Glutathione S-transferase, N-terminal domain D0856_03275 PF13194 Domain of unknown function (DUF4010) D0856_03285 PF01515 Phosphate acetyl/butaryl transferase D0856_03285 PF07085 DRTGG domain D0856_03290 PF00871 Acetokinase family D0856_03295 PF04217 Protein of unknown function, DUF412 D0856_03310 PF02653 Branched-chain amino acid transport system / permease component D0856_03315 PF00005 ABC transporter D0856_03320 PF00128 Alpha amylase, catalytic domain D0856_03320 PF02903 Alpha amylase, N-terminal ig-like domain D0856_03325 PF00990 Diguanylate cyclase, GGDEF domain D0856_03330 PF01207 Dihydrouridine synthase (Dus) D0856_03335 PF02810 SEC-C motif D0856_03335 PF07517 SecA DEAD-like domain D0856_03335 PF01043 SecA preprotein cross-linking domain D0856_03335 PF07516 SecA Wing and Scaffold domain D0856_03340 PF02600 Disulfide bond formation protein DsbB D0856_03345 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0856_03350 PF00392 Bacterial regulatory proteins, gntR family D0856_03350 PF07840 FadR C-terminal domain D0856_03365 PF10609 NUBPL iron-transfer P-loop NTPase D0856_03370 PF00485 Phosphoribulokinase / Uridine kinase family D0856_03380 PF12557 Cob(I)alamin adenosyltransferase N terminal D0856_03380 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0856_03385 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0856_03390 PF00916 Sulfate permease family D0856_03390 PF01740 STAS domain D0856_03410 PF02545 Maf-like protein D0856_03415 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0856_03420 PF01783 Ribosomal L32p protein family D0856_03425 PF02504 Fatty acid synthesis protein D0856_03430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0856_03430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0856_03435 PF00698 Acyl transferase domain D0856_03445 PF00550 Phosphopantetheine attachment site D0856_03450 PF00109 Beta-ketoacyl synthase, N-terminal domain D0856_03450 PF02801 Beta-ketoacyl synthase, C-terminal domain D0856_03455 PF01063 Amino-transferase class IV D0856_03460 PF02618 YceG-like family D0856_03465 PF02223 Thymidylate kinase D0856_03470 PF09115 DNA polymerase III, delta subunit, C terminal D0856_03475 PF01026 TatD related DNase D0856_03480 PF00367 phosphotransferase system, EIIB D0856_03480 PF02378 Phosphotransferase system, EIIC D0856_03495 PF00209 Sodium:neurotransmitter symporter family D0856_03510 PF01734 Patatin-like phospholipase D0856_03515 PF02887 Pyruvate kinase, alpha/beta domain D0856_03515 PF00224 Pyruvate kinase, barrel domain D0856_03520 PF00480 ROK family D0856_03525 PF01584 CheW-like domain D0856_03525 PF00072 Response regulator receiver domain D0856_03530 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0856_03530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0856_03530 PF14579 Helix-hairpin-helix motif D0856_03530 PF02811 PHP domain D0856_03530 PF01336 OB-fold nucleic acid binding domain D0856_03545 PF00106 short chain dehydrogenase D0856_03550 PF08496 Peptidase family S49 N-terminal D0856_03550 PF01343 Peptidase family S49 D0856_03555 PF08787 Alginate lyase D0856_03560 PF02224 Cytidylate kinase D0856_03565 PF00575 S1 RNA binding domain D0856_03570 PF00216 Bacterial DNA-binding protein D0856_03575 PF06305 Lipopolysaccharide assembly protein A domain D0856_03580 PF18073 Rubredoxin metal binding domain D0856_03585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0856_03590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_03650 PF00884 Sulfatase D0856_03655 PF00440 Bacterial regulatory proteins, tetR family D0856_03655 PF16925 Tetracyclin repressor-like, C-terminal domain D0856_03660 PF03886 ABC-type transport auxiliary lipoprotein component D0856_03665 PF02470 MlaD protein D0856_03670 PF04403 Paraquat-inducible protein A D0856_03675 PF00356 Bacterial regulatory proteins, lacI family D0856_03680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0856_03685 PF00034 Cytochrome c D0856_03690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0856_03690 PF00384 Molybdopterin oxidoreductase D0856_03690 PF01568 Molydopterin dinucleotide binding domain D0856_03695 PF03916 Polysulphide reductase, NrfD D0856_03700 PF13247 4Fe-4S dicluster domain D0856_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_03705 PF00512 His Kinase A (phospho-acceptor) domain D0856_03710 PF00196 Bacterial regulatory proteins, luxR family D0856_03710 PF00072 Response regulator receiver domain D0856_03715 PF02929 Beta galactosidase small chain D0856_03715 PF16353 Domain of unknown function(DUF4981) D0856_03715 PF00703 Glycosyl hydrolases family 2 D0856_03715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0856_03715 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0856_03725 PF02264 LamB porin D0856_03735 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0856_03735 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0856_03745 PF01966 HD domain D0856_03750 PF03466 LysR substrate binding domain D0856_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_03760 PF11412 Disulphide bond corrector protein DsbC D0856_03760 PF02683 Cytochrome C biogenesis protein transmembrane region D0856_03765 PF00085 Thioredoxin D0856_03775 PF05958 tRNA (Uracil-5-)-methyltransferase D0856_03780 PF00583 Acetyltransferase (GNAT) family D0856_03785 PF13302 Acetyltransferase (GNAT) domain D0856_03790 PF00583 Acetyltransferase (GNAT) family D0856_03795 PF00440 Bacterial regulatory proteins, tetR family D0856_03805 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_03810 PF00583 Acetyltransferase (GNAT) family D0856_03830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_03840 PF02687 FtsX-like permease family D0856_03840 PF00005 ABC transporter D0856_03840 PF12704 MacB-like periplasmic core domain D0856_03845 PF12704 MacB-like periplasmic core domain D0856_03845 PF02687 FtsX-like permease family D0856_03845 PF00005 ABC transporter D0856_03850 PF00005 ABC transporter D0856_03850 PF12704 MacB-like periplasmic core domain D0856_03850 PF02687 FtsX-like permease family D0856_03860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0856_03860 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0856_03860 PF00929 Exonuclease D0856_03860 PF11490 DNA polymerase III polC-type N-terminus II D0856_03860 PF02811 PHP domain D0856_03860 PF14579 Helix-hairpin-helix motif D0856_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_03915 PF03466 LysR substrate binding domain D0856_03925 PF01717 Cobalamin-independent synthase, Catalytic domain D0856_03925 PF08267 Cobalamin-independent synthase, N-terminal domain D0856_03940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_03940 PF00529 HlyD membrane-fusion protein of T1SS D0856_03945 PF03466 LysR substrate binding domain D0856_03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_03985 PF00672 HAMP domain D0856_03985 PF00512 His Kinase A (phospho-acceptor) domain D0856_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_03990 PF00486 Transcriptional regulatory protein, C terminal D0856_03990 PF00072 Response regulator receiver domain D0856_03995 PF00535 Glycosyl transferase family 2 D0856_04015 PF08348 YheO-like PAS domain D0856_04015 PF13309 HTH domain D0856_04020 PF01042 Endoribonuclease L-PSP D0856_04025 PF00375 Sodium:dicarboxylate symporter family D0856_04030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_04030 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_04100 PF00563 EAL domain D0856_04100 PF01590 GAF domain D0856_04100 PF00360 Phytochrome region D0856_04100 PF00990 Diguanylate cyclase, GGDEF domain D0856_04115 PF03466 LysR substrate binding domain D0856_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_04120 PF01717 Cobalamin-independent synthase, Catalytic domain D0856_04120 PF08267 Cobalamin-independent synthase, N-terminal domain D0856_04130 PF03795 YCII-related domain D0856_04135 PF03061 Thioesterase superfamily D0856_04140 PF04279 Intracellular septation protein A D0856_04150 PF00072 Response regulator receiver domain D0856_04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_04155 PF17327 Acyl homoserine lactone synthase D0856_04160 PF00375 Sodium:dicarboxylate symporter family D0856_04165 PF00290 Tryptophan synthase alpha chain D0856_04170 PF00291 Pyridoxal-phosphate dependent enzyme D0856_04175 PF00218 Indole-3-glycerol phosphate synthase D0856_04175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0856_04180 PF00591 Glycosyl transferase family, a/b domain D0856_04180 PF02885 Glycosyl transferase family, helical bundle domain D0856_04185 PF00117 Glutamine amidotransferase class-I D0856_04190 PF04715 Anthranilate synthase component I, N terminal region D0856_04190 PF00425 chorismate binding enzyme D0856_04195 PF08056 Tryptophan operon leader peptide D0856_04200 PF02811 PHP domain D0856_04205 PF01300 Telomere recombination D0856_04215 PF00849 RNA pseudouridylate synthase D0856_04215 PF01479 S4 domain D0856_04220 PF04269 Protein of unknown function, DUF440 D0856_04225 PF08207 Elongation factor P (EF-P) KOW-like domain D0856_04225 PF01132 Elongation factor P (EF-P) OB domain D0856_04225 PF09285 Elongation factor P, C-terminal D0856_04235 PF03104 DNA polymerase family B, exonuclease domain D0856_04235 PF00136 DNA polymerase family B D0856_04240 PF00196 Bacterial regulatory proteins, luxR family D0856_04240 PF00072 Response regulator receiver domain D0856_04250 PF01066 CDP-alcohol phosphatidyltransferase D0856_04275 PF00202 Aminotransferase class-III D0856_04280 PF16653 Saccharopine dehydrogenase C-terminal domain D0856_04280 PF03435 Saccharopine dehydrogenase NADP binding domain D0856_04285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0856_04300 PF00994 Probable molybdopterin binding domain D0856_04300 PF02464 Competence-damaged protein D0856_04310 PF00268 Ribonucleotide reductase, small chain D0856_04315 PF02867 Ribonucleotide reductase, barrel domain D0856_04315 PF03477 ATP cone domain D0856_04315 PF00317 Ribonucleotide reductase, all-alpha domain D0856_04330 PF00521 DNA gyrase/topoisomerase IV, subunit A D0856_04330 PF03989 DNA gyrase C-terminal domain, beta-propeller D0856_04345 PF02335 Cytochrome c552 D0856_04355 PF13247 4Fe-4S dicluster domain D0856_04360 PF03916 Polysulphide reductase, NrfD D0856_04365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0856_04365 PF01578 Cytochrome C assembly protein D0856_04370 PF08534 Redoxin D0856_04375 PF03918 Cytochrome C biogenesis protein D0856_04385 PF00925 GTP cyclohydrolase II D0856_04410 PF01471 Putative peptidoglycan binding domain D0856_04410 PF03734 L,D-transpeptidase catalytic domain D0856_04415 PF05951 Bacterial protein of unknown function (DUF882) D0856_04420 PF00753 Metallo-beta-lactamase superfamily D0856_04435 PF03480 Bacterial extracellular solute-binding protein, family 7 D0856_04445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0856_04450 PF07730 Histidine kinase D0856_04450 PF17200 Single Cache domain 2 D0856_04455 PF00196 Bacterial regulatory proteins, luxR family D0856_04455 PF00072 Response regulator receiver domain D0856_04460 PF01047 MarR family D0856_04465 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_04490 PF00155 Aminotransferase class I and II D0856_04495 PF00672 HAMP domain D0856_04495 PF01966 HD domain D0856_04500 PF00474 Sodium:solute symporter family D0856_04505 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0856_04505 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0856_04510 PF00356 Bacterial regulatory proteins, lacI family D0856_04525 PF00392 Bacterial regulatory proteins, gntR family D0856_04525 PF00155 Aminotransferase class I and II D0856_04540 PF01336 OB-fold nucleic acid binding domain D0856_04540 PF00152 tRNA synthetases class II (D, K and N) D0856_04545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_04545 PF00672 HAMP domain D0856_04545 PF02743 Cache domain D0856_04550 PF01242 6-pyruvoyl tetrahydropterin synthase D0856_04555 PF00072 Response regulator receiver domain D0856_04555 PF00196 Bacterial regulatory proteins, luxR family D0856_04565 PF00563 EAL domain D0856_04565 PF03707 Bacterial signalling protein N terminal repeat D0856_04565 PF13188 PAS domain D0856_04565 PF00990 Diguanylate cyclase, GGDEF domain D0856_04570 PF03313 Serine dehydratase alpha chain D0856_04570 PF03315 Serine dehydratase beta chain D0856_04575 PF03222 Tryptophan/tyrosine permease family D0856_04580 PF00293 NUDIX domain D0856_04590 PF09308 LuxQ, periplasmic D0856_04590 PF00512 His Kinase A (phospho-acceptor) domain D0856_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_04590 PF00072 Response regulator receiver domain D0856_04595 PF04715 Anthranilate synthase component I, N terminal region D0856_04595 PF00425 chorismate binding enzyme D0856_04610 PF04317 YcjX-like family, DUF463 D0856_04615 PF05128 Domain of unknown function (DUF697) D0856_04620 PF18024 Helix-turn-helix domain D0856_04620 PF00158 Sigma-54 interaction domain D0856_04625 PF13302 Acetyltransferase (GNAT) domain D0856_04640 PF13495 Phage integrase, N-terminal SAM-like domain D0856_04640 PF00589 Phage integrase family D0856_04705 PF00293 NUDIX domain D0856_04855 PF14602 Hexapeptide repeat of succinyl-transferase D0856_04855 PF12464 Maltose acetyltransferase D0856_04875 PF00877 NlpC/P60 family D0856_05530 PF00857 Isochorismatase family D0856_05660 PF04229 GrpB protein D0856_05765 PF13737 Transposase DDE domain D0856_05820 PF01638 HxlR-like helix-turn-helix D0856_05830 PF03575 Peptidase family S51 D0856_05850 PF00474 Sodium:solute symporter family D0856_05865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0856_05875 PF03480 Bacterial extracellular solute-binding protein, family 7 D0856_05880 PF00356 Bacterial regulatory proteins, lacI family D0856_05885 PF03328 HpcH/HpaI aldolase/citrate lyase family D0856_05905 PF00561 alpha/beta hydrolase fold D0856_05920 PF00583 Acetyltransferase (GNAT) family D0856_05925 PF00939 Sodium:sulfate symporter transmembrane region D0856_05930 PF00512 His Kinase A (phospho-acceptor) domain D0856_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_05930 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_05935 PF00158 Sigma-54 interaction domain D0856_05935 PF02954 Bacterial regulatory protein, Fis family D0856_05935 PF00072 Response regulator receiver domain D0856_05940 PF03707 Bacterial signalling protein N terminal repeat D0856_05940 PF13188 PAS domain D0856_05940 PF00563 EAL domain D0856_05940 PF00990 Diguanylate cyclase, GGDEF domain D0856_05945 PF01966 HD domain D0856_05945 PF11871 Domain of unknown function (DUF3391) D0856_05950 PF01810 LysE type translocator D0856_05955 PF11230 Protein of unknown function (DUF3029) D0856_05960 PF04055 Radical SAM superfamily D0856_05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_05965 PF03466 LysR substrate binding domain D0856_05970 PF03741 Integral membrane protein TerC family D0856_05980 PF01966 HD domain D0856_05990 PF00990 Diguanylate cyclase, GGDEF domain D0856_05990 PF17158 Membrane-associated sensor, integral membrane domain D0856_06000 PF00465 Iron-containing alcohol dehydrogenase D0856_06005 PF03222 Tryptophan/tyrosine permease family D0856_06025 PF00005 ABC transporter D0856_06025 PF00664 ABC transporter transmembrane region D0856_06030 PF00005 ABC transporter D0856_06030 PF00664 ABC transporter transmembrane region D0856_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06045 PF03466 LysR substrate binding domain D0856_06050 PF03992 Antibiotic biosynthesis monooxygenase D0856_06055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0856_06055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0856_06070 PF00012 Hsp70 protein D0856_06075 PF00012 Hsp70 protein D0856_06085 PF00990 Diguanylate cyclase, GGDEF domain D0856_06110 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0856_06110 PF04151 Bacterial pre-peptidase C-terminal domain D0856_06110 PF01447 Thermolysin metallopeptidase, catalytic domain D0856_06110 PF07504 Fungalysin/Thermolysin Propeptide Motif D0856_06110 PF03413 Peptidase propeptide and YPEB domain D0856_06120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0856_06120 PF00384 Molybdopterin oxidoreductase D0856_06120 PF01568 Molydopterin dinucleotide binding domain D0856_06125 PF12800 4Fe-4S binding domain D0856_06125 PF13247 4Fe-4S dicluster domain D0856_06130 PF04976 DMSO reductase anchor subunit (DmsC) D0856_06135 PF02613 Nitrate reductase delta subunit D0856_06145 PF02525 Flavodoxin-like fold D0856_06150 PF00270 DEAD/DEAH box helicase D0856_06150 PF11898 Domain of unknown function (DUF3418) D0856_06150 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0856_06150 PF04408 Helicase associated domain (HA2) D0856_06150 PF00271 Helicase conserved C-terminal domain D0856_06180 PF04204 Homoserine O-succinyltransferase D0856_06205 PF00893 Small Multidrug Resistance protein D0856_06210 PF13520 Amino acid permease D0856_06215 PF01810 LysE type translocator D0856_06220 PF03466 LysR substrate binding domain D0856_06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06225 PF01370 NAD dependent epimerase/dehydratase family D0856_06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06230 PF03466 LysR substrate binding domain D0856_06235 PF03279 Bacterial lipid A biosynthesis acyltransferase D0856_06250 PF01047 MarR family D0856_06285 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0856_06290 PF01810 LysE type translocator D0856_06300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0856_06305 PF01117 Aerolysin toxin D0856_06305 PF03440 Aerolysin/Pertussis toxin (APT) domain D0856_06320 PF01235 Sodium:alanine symporter family D0856_06340 PF02311 AraC-like ligand binding domain D0856_06340 PF12833 Helix-turn-helix domain D0856_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06375 PF03466 LysR substrate binding domain D0856_06380 PF00884 Sulfatase D0856_06385 PF01406 tRNA synthetases class I (C) catalytic domain D0856_06390 PF01554 MatE D0856_06395 PF00571 CBS domain D0856_06405 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_06410 PF00583 Acetyltransferase (GNAT) family D0856_06415 PF00202 Aminotransferase class-III D0856_06420 PF06339 Ectoine synthase D0856_06425 PF13840 ACT domain D0856_06425 PF00696 Amino acid kinase family D0856_06435 PF00248 Aldo/keto reductase family D0856_06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06440 PF03466 LysR substrate binding domain D0856_06445 PF00034 Cytochrome c D0856_06445 PF03150 Di-haem cytochrome c peroxidase D0856_06455 PF07690 Major Facilitator Superfamily D0856_06460 PF00082 Subtilase family D0856_06460 PF04151 Bacterial pre-peptidase C-terminal domain D0856_06460 PF05922 Peptidase inhibitor I9 D0856_06465 PF03466 LysR substrate binding domain D0856_06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_06470 PF05368 NmrA-like family D0856_06530 PF01794 Ferric reductase like transmembrane component D0856_06560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_06575 PF00155 Aminotransferase class I and II D0856_06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_06580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0856_06580 PF17203 Single cache domain 3 D0856_06580 PF00989 PAS fold D0856_06585 PF12431 Transcriptional regulator D0856_06585 PF00072 Response regulator receiver domain D0856_06590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0856_06590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0856_06595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0856_06600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0856_06600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0856_06630 PF00158 Sigma-54 interaction domain D0856_06630 PF02954 Bacterial regulatory protein, Fis family D0856_06630 PF01590 GAF domain D0856_06635 PF00171 Aldehyde dehydrogenase family D0856_06640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_06645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_06645 PF00529 HlyD membrane-fusion protein of T1SS D0856_06650 PF00873 AcrB/AcrD/AcrF family D0856_06655 PF16868 NMT1-like family D0856_06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_06660 PF00672 HAMP domain D0856_06660 PF02743 Cache domain D0856_06665 PF01925 Sulfite exporter TauE/SafE D0856_06670 PF01970 Tripartite tricarboxylate transporter TctA family D0856_06710 PF00069 Protein kinase domain D0856_06710 PF03793 PASTA domain D0856_06745 PF17871 AAA lid domain D0856_06745 PF00004 ATPase family associated with various cellular activities (AAA) D0856_06745 PF07724 AAA domain (Cdc48 subfamily) D0856_06745 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_06800 PF04717 Type VI secretion system, phage-baseplate injector D0856_06800 PF16671 Actin cross-linking domain D0856_06820 PF00285 Citrate synthase, C-terminal domain D0856_06825 PF00330 Aconitase family (aconitate hydratase) D0856_06825 PF00694 Aconitase C-terminal domain D0856_06830 PF04303 PrpF protein D0856_06835 PF16177 Acetyl-coenzyme A synthetase N-terminus D0856_06835 PF00501 AMP-binding enzyme D0856_06835 PF13193 AMP-binding enzyme C-terminal domain D0856_06845 PF00089 Trypsin D0856_06860 PF04055 Radical SAM superfamily D0856_06865 PF06508 Queuosine biosynthesis protein QueC D0856_06870 PF00990 Diguanylate cyclase, GGDEF domain D0856_06870 PF17158 Membrane-associated sensor, integral membrane domain D0856_06880 PF00691 OmpA family D0856_06880 PF05736 OprF membrane domain D0856_06905 PF03422 Carbohydrate binding module (family 6) D0856_06905 PF02412 Thrombospondin type 3 repeat D0856_06920 PF17785 PUA-like domain D0856_06920 PF10672 S-adenosylmethionine-dependent methyltransferase D0856_06925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_06925 PF02743 Cache domain D0856_06925 PF00672 HAMP domain D0856_06930 PF00708 Acylphosphatase D0856_06935 PF04358 DsrC like protein D0856_06945 PF01027 Inhibitor of apoptosis-promoting Bax1 D0856_06950 PF00005 ABC transporter D0856_06955 PF00528 Binding-protein-dependent transport system inner membrane component D0856_06960 PF00528 Binding-protein-dependent transport system inner membrane component D0856_06965 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_06975 PF10414 Sirohaem synthase dimerisation region D0856_06975 PF14824 Sirohaem biosynthesis protein central D0856_06975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_06980 PF04461 Protein of unknown function (DUF520) D0856_06985 PF00793 DAHP synthetase I family D0856_07035 PF03572 Peptidase family S41 D0856_07035 PF00595 PDZ domain D0856_07035 PF11818 C-terminal domain of tail specific protease (DUF3340) D0856_07035 PF17804 Tail specific protease N-terminal domain D0856_07055 PF05088 Bacterial NAD-glutamate dehydrogenase D0856_07065 PF07126 Cell-division protein ZapC D0856_07070 PF10672 S-adenosylmethionine-dependent methyltransferase D0856_07070 PF02926 THUMP domain D0856_07070 PF01170 Putative RNA methylase family UPF0020 D0856_07090 PF04957 Ribosome modulation factor D0856_07095 PF07977 FabA-like domain D0856_07190 PF00512 His Kinase A (phospho-acceptor) domain D0856_07190 PF09308 LuxQ, periplasmic D0856_07190 PF00072 Response regulator receiver domain D0856_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_07220 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D0856_07220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0856_07245 PF00027 Cyclic nucleotide-binding domain D0856_07245 PF13545 Crp-like helix-turn-helix domain D0856_07250 PF00582 Universal stress protein family D0856_07255 PF01171 PP-loop family D0856_07275 PF08402 TOBE domain D0856_07275 PF00005 ABC transporter D0856_07280 PF00528 Binding-protein-dependent transport system inner membrane component D0856_07285 PF00528 Binding-protein-dependent transport system inner membrane component D0856_07290 PF13416 Bacterial extracellular solute-binding protein D0856_07295 PF13416 Bacterial extracellular solute-binding protein D0856_07300 PF02146 Sir2 family D0856_07315 PF13247 4Fe-4S dicluster domain D0856_07320 PF01568 Molydopterin dinucleotide binding domain D0856_07320 PF00384 Molybdopterin oxidoreductase D0856_07320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0856_07330 PF02613 Nitrate reductase delta subunit D0856_07350 PF02634 FdhD/NarQ family D0856_07355 PF00005 ABC transporter D0856_07355 PF12848 ABC transporter D0856_07375 PF00512 His Kinase A (phospho-acceptor) domain D0856_07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_07380 PF02954 Bacterial regulatory protein, Fis family D0856_07380 PF00158 Sigma-54 interaction domain D0856_07380 PF00072 Response regulator receiver domain D0856_07385 PF12849 PBP superfamily domain D0856_07390 PF00528 Binding-protein-dependent transport system inner membrane component D0856_07395 PF08402 TOBE domain D0856_07395 PF00005 ABC transporter D0856_07400 PF12804 MobA-like NTP transferase domain D0856_07405 PF03453 MoeA N-terminal region (domain I and II) D0856_07405 PF03454 MoeA C-terminal region (domain IV) D0856_07405 PF00994 Probable molybdopterin binding domain D0856_07420 PF00480 ROK family D0856_07465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_07465 PF00672 HAMP domain D0856_07465 PF02743 Cache domain D0856_07470 PF00877 NlpC/P60 family D0856_07480 PF05230 MASE2 domain D0856_07480 PF00990 Diguanylate cyclase, GGDEF domain D0856_07485 PF01339 CheB methylesterase D0856_07485 PF00072 Response regulator receiver domain D0856_07500 PF00677 Lumazine binding domain D0856_07505 PF01554 MatE D0856_07515 PF14743 DNA ligase OB-like domain D0856_07515 PF01068 ATP dependent DNA ligase domain D0856_07520 PF01740 STAS domain D0856_07525 PF00691 OmpA family D0856_07530 PF02563 Polysaccharide biosynthesis/export protein D0856_07530 PF10531 SLBB domain D0856_07545 PF00158 Sigma-54 interaction domain D0856_07545 PF02954 Bacterial regulatory protein, Fis family D0856_07545 PF00072 Response regulator receiver domain D0856_07555 PF00534 Glycosyl transferases group 1 D0856_07555 PF13439 Glycosyltransferase Family 4 D0856_07585 PF00664 ABC transporter transmembrane region D0856_07585 PF00005 ABC transporter D0856_07595 PF13439 Glycosyltransferase Family 4 D0856_07595 PF00534 Glycosyl transferases group 1 D0856_07605 PF02397 Bacterial sugar transferase D0856_07615 PF13402 Peptidase M60, enhancin and enhancin-like D0856_07615 PF17291 N-terminal domain of M60-like peptidases D0856_07615 PF13322 Domain of unknown function (DUF4092) D0856_07640 PF00563 EAL domain D0856_07640 PF00990 Diguanylate cyclase, GGDEF domain D0856_07640 PF03707 Bacterial signalling protein N terminal repeat D0856_07640 PF13188 PAS domain D0856_07645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0856_07645 PF00072 Response regulator receiver domain D0856_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_07645 PF01627 Hpt domain D0856_07645 PF00512 His Kinase A (phospho-acceptor) domain D0856_07645 PF00672 HAMP domain D0856_07665 PF12464 Maltose acetyltransferase D0856_07665 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_07670 PF09308 LuxQ, periplasmic D0856_07670 PF00072 Response regulator receiver domain D0856_07670 PF00512 His Kinase A (phospho-acceptor) domain D0856_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_07680 PF01928 CYTH domain D0856_07695 PF04237 YjbR D0856_07700 PF01047 MarR family D0856_07735 PF05378 Hydantoinase/oxoprolinase N-terminal region D0856_07735 PF01968 Hydantoinase/oxoprolinase D0856_07765 PF00480 ROK family D0856_07780 PF01411 tRNA synthetases class II (A) D0856_07780 PF02272 DHHA1 domain D0856_07780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0856_07785 PF03729 Short repeat of unknown function (DUF308) D0856_07790 PF00924 Mechanosensitive ion channel D0856_07905 PF00072 Response regulator receiver domain D0856_07905 PF01966 HD domain D0856_07910 PF13673 Acetyltransferase (GNAT) domain D0856_07910 PF00117 Glutamine amidotransferase class-I D0856_07910 PF03352 Methyladenine glycosylase D0856_07910 PF00958 GMP synthase C terminal domain D0856_07910 PF13302 Acetyltransferase (GNAT) domain D0856_07915 PF00582 Universal stress protein family D0856_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_07930 PF03466 LysR substrate binding domain D0856_07945 PF00884 Sulfatase D0856_07945 PF11893 Domain of unknown function (DUF3413) D0856_07950 PF00267 Gram-negative porin D0856_07955 PF03466 LysR substrate binding domain D0856_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_07960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_07965 PF00873 AcrB/AcrD/AcrF family D0856_07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_07970 PF03466 LysR substrate binding domain D0856_07975 PF05552 Conserved TM helix D0856_07975 PF00924 Mechanosensitive ion channel D0856_08000 PF07728 AAA domain (dynein-related subfamily) D0856_08000 PF12102 Domain of unknown function (DUF3578) D0856_08025 PF01420 Type I restriction modification DNA specificity domain D0856_08115 PF14497 Glutathione S-transferase, C-terminal domain D0856_08115 PF02798 Glutathione S-transferase, N-terminal domain D0856_08125 PF04209 homogentisate 1,2-dioxygenase D0856_08130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_08145 PF01546 Peptidase family M20/M25/M40 D0856_08145 PF07687 Peptidase dimerisation domain D0856_08155 PF00990 Diguanylate cyclase, GGDEF domain D0856_08155 PF00072 Response regulator receiver domain D0856_08160 PF05971 RNA methyltransferase D0856_08165 PF01863 Protein of unknown function DUF45 D0856_08175 PF02368 Bacterial Ig-like domain (group 2) D0856_08175 PF11999 Protein of unknown function (DUF3494) D0856_08185 PF00732 GMC oxidoreductase D0856_08185 PF05199 GMC oxidoreductase D0856_08190 PF02954 Bacterial regulatory protein, Fis family D0856_08190 PF00072 Response regulator receiver domain D0856_08190 PF14532 Sigma-54 interaction domain D0856_08215 PF00486 Transcriptional regulatory protein, C terminal D0856_08215 PF00072 Response regulator receiver domain D0856_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_08275 PF03466 LysR substrate binding domain D0856_08300 PF00005 ABC transporter D0856_08305 PF01032 FecCD transport family D0856_08310 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0856_08320 PF00300 Histidine phosphatase superfamily (branch 1) D0856_08325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0856_08330 PF02654 Cobalamin-5-phosphate synthase D0856_08335 PF02277 Phosphoribosyltransferase D0856_08340 PF01613 Flavin reductase like domain D0856_08345 PF13460 NAD(P)H-binding D0856_08360 PF08411 Exonuclease C-terminal D0856_08360 PF00929 Exonuclease D0856_08365 PF03788 LrgA family D0856_08385 PF02222 ATP-grasp domain D0856_08415 PF00294 pfkB family carbohydrate kinase D0856_08420 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0856_08420 PF08244 Glycosyl hydrolases family 32 C terminal D0856_08430 PF03483 B3/4 domain D0856_08430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0856_08430 PF03147 Ferredoxin-fold anticodon binding domain D0856_08430 PF01588 Putative tRNA binding domain D0856_08430 PF03484 tRNA synthetase B5 domain D0856_08435 PF01409 tRNA synthetases class II core domain (F) D0856_08435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0856_08440 PF17158 Membrane-associated sensor, integral membrane domain D0856_08440 PF00990 Diguanylate cyclase, GGDEF domain D0856_08470 PF01906 Putative heavy-metal-binding D0856_08475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_08480 PF01042 Endoribonuclease L-PSP D0856_08495 PF00453 Ribosomal protein L20 D0856_08500 PF01632 Ribosomal protein L35 D0856_08505 PF00707 Translation initiation factor IF-3, C-terminal domain D0856_08505 PF05198 Translation initiation factor IF-3, N-terminal domain D0856_08510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0856_08510 PF02824 TGS domain D0856_08510 PF03129 Anticodon binding domain D0856_08510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0856_08525 PF00392 Bacterial regulatory proteins, gntR family D0856_08525 PF07702 UTRA domain D0856_08535 PF00491 Arginase family D0856_08540 PF17391 Urocanase N-terminal domain D0856_08540 PF01175 Urocanase Rossmann-like domain D0856_08540 PF17392 Urocanase C-terminal domain D0856_08545 PF00221 Aromatic amino acid lyase D0856_08565 PF01565 FAD binding domain D0856_08565 PF02913 FAD linked oxidases, C-terminal domain D0856_08565 PF13183 4Fe-4S dicluster domain D0856_08580 PF05736 OprF membrane domain D0856_08580 PF00691 OmpA family D0856_08620 PF02253 Phospholipase A1 D0856_08625 PF08482 ATP-dependent helicase C-terminal D0856_08625 PF00270 DEAD/DEAH box helicase D0856_08625 PF00271 Helicase conserved C-terminal domain D0856_08625 PF04408 Helicase associated domain (HA2) D0856_08630 PF03949 Malic enzyme, NAD binding domain D0856_08630 PF00390 Malic enzyme, N-terminal domain D0856_08635 PF02698 DUF218 domain D0856_08640 PF00939 Sodium:sulfate symporter transmembrane region D0856_08645 PF08448 PAS fold D0856_08645 PF00990 Diguanylate cyclase, GGDEF domain D0856_08655 PF00266 Aminotransferase class-V D0856_08665 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_08670 PF00005 ABC transporter D0856_08670 PF00664 ABC transporter transmembrane region D0856_08675 PF00664 ABC transporter transmembrane region D0856_08675 PF00005 ABC transporter D0856_08685 PF03466 LysR substrate binding domain D0856_08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_08690 PF00563 EAL domain D0856_08690 PF12792 CSS motif domain associated with EAL D0856_08720 PF00990 Diguanylate cyclase, GGDEF domain D0856_08720 PF17151 Periplasmic sensor domain D0856_08730 PF00266 Aminotransferase class-V D0856_08740 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_08740 PF00512 His Kinase A (phospho-acceptor) domain D0856_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_08755 PF04993 TfoX N-terminal domain D0856_08755 PF04994 TfoX C-terminal domain D0856_08770 PF03956 Lysine exporter LysO D0856_08780 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0856_08785 PF01418 Helix-turn-helix domain, rpiR family D0856_08785 PF01380 SIS domain D0856_08790 PF00465 Iron-containing alcohol dehydrogenase D0856_08795 PF00462 Glutaredoxin D0856_08800 PF02080 TrkA-C domain D0856_08800 PF06826 Predicted Permease Membrane Region D0856_08805 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0856_08805 PF07055 Enoyl reductase FAD binding domain D0856_08805 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0856_08810 PF02770 Acyl-CoA dehydrogenase, middle domain D0856_08810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0856_08810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0856_08810 PF09317 Domain of unknown function (DUF1974) D0856_08815 PF00440 Bacterial regulatory proteins, tetR family D0856_08815 PF16295 Tetracyclin repressor-like, C-terminal domain D0856_08820 PF06965 Na+/H+ antiporter 1 D0856_08840 PF01554 MatE D0856_08845 PF11066 Protein of unknown function (DUF2867) D0856_08845 PF13460 NAD(P)H-binding D0856_08850 PF01734 Patatin-like phospholipase D0856_08860 PF07690 Major Facilitator Superfamily D0856_08865 PF01479 S4 domain D0856_08865 PF00849 RNA pseudouridylate synthase D0856_08870 PF04851 Type III restriction enzyme, res subunit D0856_08870 PF00271 Helicase conserved C-terminal domain D0856_08885 PF00072 Response regulator receiver domain D0856_08885 PF00486 Transcriptional regulatory protein, C terminal D0856_08900 PF02709 N-terminal domain of galactosyltransferase D0856_08900 PF00535 Glycosyl transferase family 2 D0856_08910 PF01386 Ribosomal L25p family D0856_08925 PF00149 Calcineurin-like phosphoesterase D0856_08925 PF02872 5'-nucleotidase, C-terminal domain D0856_08970 PF05816 Toxic anion resistance protein (TelA) D0856_08975 PF02342 TerD domain D0856_08980 PF02342 TerD domain D0856_08990 PF06945 Protein of unknown function (DUF1289) D0856_09000 PF01740 STAS domain D0856_09000 PF00916 Sulfate permease family D0856_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_09015 PF00512 His Kinase A (phospho-acceptor) domain D0856_09025 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_09025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0856_09035 PF09335 SNARE associated Golgi protein D0856_09040 PF13416 Bacterial extracellular solute-binding protein D0856_09045 PF00528 Binding-protein-dependent transport system inner membrane component D0856_09050 PF00005 ABC transporter D0856_09055 PF01066 CDP-alcohol phosphatidyltransferase D0856_09065 PF03063 Prismane/CO dehydrogenase family D0856_09070 PF00175 Oxidoreductase NAD-binding domain D0856_09070 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_09070 PF00970 Oxidoreductase FAD-binding domain D0856_09080 PF00849 RNA pseudouridylate synthase D0856_09085 PF12729 Four helix bundle sensory module for signal transduction D0856_09085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_09085 PF00672 HAMP domain D0856_09090 PF00209 Sodium:neurotransmitter symporter family D0856_09095 PF13091 PLD-like domain D0856_09095 PF13396 Phospholipase_D-nuclease N-terminal D0856_09100 PF01053 Cys/Met metabolism PLP-dependent enzyme D0856_09105 PF00561 alpha/beta hydrolase fold D0856_09110 PF03280 Proteobacterial lipase chaperone protein D0856_09115 PF03352 Methyladenine glycosylase D0856_09120 PF00873 AcrB/AcrD/AcrF family D0856_09125 PF13533 Biotin-lipoyl like D0856_09135 PF04024 PspC domain D0856_09140 PF06667 Phage shock protein B D0856_09145 PF04012 PspA/IM30 family D0856_09150 PF02954 Bacterial regulatory protein, Fis family D0856_09150 PF00158 Sigma-54 interaction domain D0856_09155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_09160 PF00528 Binding-protein-dependent transport system inner membrane component D0856_09165 PF00528 Binding-protein-dependent transport system inner membrane component D0856_09165 PF12911 N-terminal TM domain of oligopeptide transport permease C D0856_09170 PF00005 ABC transporter D0856_09170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_09175 PF00005 ABC transporter D0856_09185 PF02833 DHHA2 domain D0856_09185 PF01368 DHH family D0856_09200 PF01568 Molydopterin dinucleotide binding domain D0856_09200 PF00384 Molybdopterin oxidoreductase D0856_09200 PF18364 Molybdopterin oxidoreductase N-terminal domain D0856_09205 PF03264 NapC/NirT cytochrome c family, N-terminal region D0856_09210 PF06796 Periplasmic nitrate reductase protein NapE D0856_09215 PF03649 Uncharacterised protein family (UPF0014) D0856_09220 PF01226 Formate/nitrite transporter D0856_09245 PF02698 DUF218 domain D0856_09250 PF00265 Thymidine kinase D0856_09255 PF01406 tRNA synthetases class I (C) catalytic domain D0856_09255 PF09190 DALR domain D0856_09260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0856_09265 PF00149 Calcineurin-like phosphoesterase D0856_09270 PF00563 EAL domain D0856_09270 PF08668 HDOD domain D0856_09275 PF02810 SEC-C motif D0856_09280 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0856_09280 PF01502 Phosphoribosyl-AMP cyclohydrolase D0856_09285 PF00977 Histidine biosynthesis protein D0856_09290 PF00977 Histidine biosynthesis protein D0856_09295 PF00117 Glutamine amidotransferase class-I D0856_09300 PF00475 Imidazoleglycerol-phosphate dehydratase D0856_09300 PF08645 Polynucleotide kinase 3 phosphatase D0856_09305 PF00155 Aminotransferase class I and II D0856_09310 PF00815 Histidinol dehydrogenase D0856_09315 PF08029 HisG, C-terminal domain D0856_09315 PF01634 ATP phosphoribosyltransferase D0856_09320 PF03553 Na+/H+ antiporter family D0856_09325 PF00816 H-NS histone family D0856_09330 PF00294 pfkB family carbohydrate kinase D0856_09345 PF04356 Protein of unknown function (DUF489) D0856_09350 PF08328 Adenylosuccinate lyase C-terminal D0856_09350 PF00206 Lyase D0856_09360 PF16036 Chalcone isomerase-like D0856_09385 PF00106 short chain dehydrogenase D0856_09395 PF01435 Peptidase family M48 D0856_09410 PF08241 Methyltransferase domain D0856_09415 PF00155 Aminotransferase class I and II D0856_09430 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0856_09445 PF02403 Seryl-tRNA synthetase N-terminal domain D0856_09445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0856_09450 PF12002 MgsA AAA+ ATPase C terminal D0856_09450 PF16193 AAA C-terminal domain D0856_09450 PF00004 ATPase family associated with various cellular activities (AAA) D0856_09455 PF03548 Outer membrane lipoprotein carrier protein LolA D0856_09460 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0856_09460 PF17854 FtsK alpha domain D0856_09460 PF01580 FtsK/SpoIIIE family D0856_09460 PF09397 Ftsk gamma domain D0856_09465 PF01037 Lrp/AsnC ligand binding domain D0856_09470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0856_09470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0856_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_09480 PF03466 LysR substrate binding domain D0856_09490 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0856_09500 PF01081 KDPG and KHG aldolase D0856_09505 PF00294 pfkB family carbohydrate kinase D0856_09510 PF07883 Cupin domain D0856_09515 PF05426 Alginate lyase D0856_09515 PF07940 Heparinase II/III-like protein D0856_09520 PF05426 Alginate lyase D0856_09520 PF07940 Heparinase II/III-like protein D0856_09525 PF08787 Alginate lyase D0856_09540 PF01979 Amidohydrolase family D0856_09550 PF03401 Tripartite tricarboxylate transporter family receptor D0856_09560 PF01970 Tripartite tricarboxylate transporter TctA family D0856_09565 PF01752 Collagenase D0856_09565 PF04151 Bacterial pre-peptidase C-terminal domain D0856_09565 PF08453 Peptidase family M9 N-terminal D0856_09585 PF03372 Endonuclease/Exonuclease/phosphatase family D0856_09625 PF17155 Gammaproteobacterial periplasmic sensor domain D0856_09625 PF00990 Diguanylate cyclase, GGDEF domain D0856_09630 PF07274 Protein of unknown function (DUF1440) D0856_09640 PF09339 IclR helix-turn-helix domain D0856_09640 PF01614 Bacterial transcriptional regulator D0856_09650 PF07883 Cupin domain D0856_09660 PF00474 Sodium:solute symporter family D0856_09665 PF02614 Glucuronate isomerase D0856_09675 PF00141 Peroxidase D0856_09680 PF08787 Alginate lyase D0856_09690 PF07729 FCD domain D0856_09690 PF00392 Bacterial regulatory proteins, gntR family D0856_09700 PF07729 FCD domain D0856_09700 PF00392 Bacterial regulatory proteins, gntR family D0856_09705 PF00571 CBS domain D0856_09710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0856_09710 PF02811 PHP domain D0856_09710 PF14579 Helix-hairpin-helix motif D0856_09710 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0856_09710 PF00929 Exonuclease D0856_09720 PF01464 Transglycosylase SLT domain D0856_09720 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_09735 PF00474 Sodium:solute symporter family D0856_09760 PF00005 ABC transporter D0856_09765 PF01032 FecCD transport family D0856_09770 PF01032 FecCD transport family D0856_09780 PF07715 TonB-dependent Receptor Plug Domain D0856_09780 PF00593 TonB dependent receptor D0856_09790 PF03606 C4-dicarboxylate anaerobic carrier D0856_09795 PF01546 Peptidase family M20/M25/M40 D0856_09795 PF07687 Peptidase dimerisation domain D0856_09800 PF07729 FCD domain D0856_09800 PF00392 Bacterial regulatory proteins, gntR family D0856_09810 PF00873 AcrB/AcrD/AcrF family D0856_09815 PF00529 HlyD membrane-fusion protein of T1SS D0856_09815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_09830 PF00672 HAMP domain D0856_09830 PF02743 Cache domain D0856_09850 PF00893 Small Multidrug Resistance protein D0856_09855 PF00893 Small Multidrug Resistance protein D0856_09865 PF00689 Cation transporting ATPase, C-terminus D0856_09865 PF00690 Cation transporter/ATPase, N-terminus D0856_09875 PF00528 Binding-protein-dependent transport system inner membrane component D0856_09890 PF00005 ABC transporter D0856_09890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_09895 PF01554 MatE D0856_09920 PF13545 Crp-like helix-turn-helix domain D0856_09920 PF00027 Cyclic nucleotide-binding domain D0856_09925 PF03831 PhnA domain D0856_09925 PF08274 PhnA Zinc-Ribbon D0856_09935 PF02378 Phosphotransferase system, EIIC D0856_09935 PF00367 phosphotransferase system, EIIB D0856_09945 PF00884 Sulfatase D0856_09980 PF05844 YopD protein D0856_09995 PF04792 V antigen (LcrV) protein D0856_10005 PF09621 Type III secretion system regulator (LcrR) D0856_10010 PF00771 FHIPEP family D0856_10030 PF09059 TyeA D0856_10035 PF07201 HrpJ-like domain D0856_10040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_10040 PF18269 T3SS EscN ATPase C-terminal domain D0856_10040 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0856_10055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0856_10060 PF00813 FliP family D0856_10065 PF01313 Bacterial export proteins, family 3 D0856_10070 PF01311 Bacterial export proteins, family 1 D0856_10075 PF01312 FlhB HrpN YscU SpaS Family D0856_10090 PF02661 Fic/DOC family D0856_10110 PF02108 Flagellar assembly protein FliH D0856_10120 PF01514 Secretory protein of YscJ/FliF family D0856_10125 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI D0856_10140 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D0856_10170 PF12833 Helix-turn-helix domain D0856_10200 PF06610 L-alanine exporter D0856_10205 PF00512 His Kinase A (phospho-acceptor) domain D0856_10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_10205 PF00072 Response regulator receiver domain D0856_10205 PF09308 LuxQ, periplasmic D0856_10215 PF03738 Glutathionylspermidine synthase preATP-grasp D0856_10225 PF03994 Domain of Unknown Function (DUF350) D0856_10235 PF02445 Quinolinate synthetase A protein D0856_10240 PF16331 TolA binding protein trimerisation D0856_10240 PF13174 Tetratricopeptide repeat D0856_10245 PF00691 OmpA family D0856_10250 PF04052 TolB amino-terminal domain D0856_10250 PF07676 WD40-like Beta Propeller Repeat D0856_10260 PF02472 Biopolymer transport protein ExbD/TolR D0856_10265 PF01618 MotA/TolQ/ExbB proton channel family D0856_10270 PF03061 Thioesterase superfamily D0856_10280 PF08173 Membrane bound YbgT-like protein D0856_10285 PF02322 Cytochrome bd terminal oxidase subunit II D0856_10290 PF01654 Cytochrome bd terminal oxidase subunit I D0856_10295 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0856_10295 PF05491 RuvB C-terminal winged helix domain D0856_10295 PF17864 RuvB AAA lid domain D0856_10300 PF07499 RuvA, C-terminal domain D0856_10300 PF01330 RuvA N terminal domain D0856_10305 PF02203 Tar ligand binding domain homologue D0856_10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_10305 PF00672 HAMP domain D0856_10310 PF02075 Crossover junction endodeoxyribonuclease RuvC D0856_10315 PF02938 GAD domain D0856_10315 PF00152 tRNA synthetases class II (D, K and N) D0856_10315 PF01336 OB-fold nucleic acid binding domain D0856_10320 PF01904 Protein of unknown function DUF72 D0856_10325 PF13649 Methyltransferase domain D0856_10330 PF08003 Protein of unknown function (DUF1698) D0856_10340 PF18030 RimK PreATP-grasp domain D0856_10340 PF08443 RimK-like ATP-grasp domain D0856_10365 PF00732 GMC oxidoreductase D0856_10365 PF05199 GMC oxidoreductase D0856_10370 PF00501 AMP-binding enzyme D0856_10370 PF13193 AMP-binding enzyme C-terminal domain D0856_10375 PF00171 Aldehyde dehydrogenase family D0856_10380 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0856_10380 PF12833 Helix-turn-helix domain D0856_10385 PF16330 MukB hinge domain D0856_10385 PF04310 MukB N-terminal D0856_10390 PF04288 MukE-like family D0856_10395 PF17193 MukF C-terminal domain D0856_10395 PF03882 MukF winged-helix domain D0856_10395 PF17192 MukF middle domain D0856_10405 PF02698 DUF218 domain D0856_10410 PF00072 Response regulator receiver domain D0856_10410 PF00486 Transcriptional regulatory protein, C terminal D0856_10415 PF02613 Nitrate reductase delta subunit D0856_10420 PF00356 Bacterial regulatory proteins, lacI family D0856_10425 PF04994 TfoX C-terminal domain D0856_10425 PF04993 TfoX N-terminal domain D0856_10445 PF00534 Glycosyl transferases group 1 D0856_10445 PF08323 Starch synthase catalytic domain D0856_10450 PF00483 Nucleotidyl transferase D0856_10455 PF08272 Topoisomerase I zinc-ribbon-like D0856_10455 PF01131 DNA topoisomerase D0856_10455 PF01396 Topoisomerase DNA binding C4 zinc finger D0856_10455 PF01751 Toprim domain D0856_10460 PF10692 Protein of unknown function (DUF2498) D0856_10465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0856_10475 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0856_10485 PF01176 Translation initiation factor 1A / IF-1 D0856_10490 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_10490 PF02861 Clp amino terminal domain, pathogenicity island component D0856_10490 PF17871 AAA lid domain D0856_10490 PF07724 AAA domain (Cdc48 subfamily) D0856_10490 PF00004 ATPase family associated with various cellular activities (AAA) D0856_10495 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0856_10500 PF00313 'Cold-shock' DNA-binding domain D0856_10505 PF03971 Monomeric isocitrate dehydrogenase D0856_10510 PF00849 RNA pseudouridylate synthase D0856_10515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0856_10520 PF13609 Gram-negative porin D0856_10525 PF13307 Helicase C-terminal domain D0856_10525 PF06733 DEAD_2 D0856_10535 PF07445 Primosomal replication protein priC D0856_10540 PF10689 Protein of unknown function (DUF2496) D0856_10550 PF03372 Endonuclease/Exonuclease/phosphatase family D0856_10555 PF00005 ABC transporter D0856_10555 PF00664 ABC transporter transmembrane region D0856_10560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_10560 PF00529 HlyD membrane-fusion protein of T1SS D0856_10570 PF00528 Binding-protein-dependent transport system inner membrane component D0856_10575 PF00528 Binding-protein-dependent transport system inner membrane component D0856_10580 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_10585 PF00005 ABC transporter D0856_10600 PF02901 Pyruvate formate lyase-like D0856_10600 PF01228 Glycine radical D0856_10610 PF04055 Radical SAM superfamily D0856_10620 PF03887 YfbU domain D0856_10630 PF08298 PrkA AAA domain D0856_10630 PF06798 PrkA serine protein kinase C-terminal domain D0856_10635 PF04285 Protein of unknown function (DUF444) D0856_10640 PF04293 SpoVR like protein D0856_10645 PF02348 Cytidylyltransferase D0856_10650 PF03966 Trm112p-like protein D0856_10655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0856_10660 PF00005 ABC transporter D0856_10660 PF00664 ABC transporter transmembrane region D0856_10665 PF03772 Competence protein D0856_10665 PF00753 Metallo-beta-lactamase superfamily D0856_10675 PF02687 FtsX-like permease family D0856_10675 PF12704 MacB-like periplasmic core domain D0856_10680 PF00005 ABC transporter D0856_10685 PF12704 MacB-like periplasmic core domain D0856_10685 PF02687 FtsX-like permease family D0856_10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_10715 PF05728 Uncharacterised protein family (UPF0227) D0856_10725 PF13036 Peptidoglycan-synthase activator LpoB D0856_10725 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0856_10740 PF01230 HIT domain D0856_10755 PF01048 Phosphorylase superfamily D0856_10760 PF00403 Heavy-metal-associated domain D0856_10795 PF08765 Mor transcription activator family D0856_10810 PF10124 Mu-like prophage major head subunit gpT D0856_10825 PF00571 CBS domain D0856_10825 PF00478 IMP dehydrogenase / GMP reductase domain D0856_10835 PF11953 Domain of unknown function (DUF3470) D0856_10835 PF00037 4Fe-4S binding domain D0856_10840 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0856_10840 PF00588 SpoU rRNA Methylase family D0856_10845 PF00690 Cation transporter/ATPase, N-terminus D0856_10845 PF00689 Cation transporting ATPase, C-terminus D0856_10890 PF17152 Periplasmic sensor domain D0856_10890 PF00990 Diguanylate cyclase, GGDEF domain D0856_10900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0856_10905 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0856_10920 PF01037 Lrp/AsnC ligand binding domain D0856_10920 PF13404 AsnC-type helix-turn-helix domain D0856_10925 PF00291 Pyridoxal-phosphate dependent enzyme D0856_10945 PF13533 Biotin-lipoyl like D0856_10990 PF07690 Major Facilitator Superfamily D0856_10995 PF03601 Conserved hypothetical protein 698 D0856_11005 PF03466 LysR substrate binding domain D0856_11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_11010 PF00367 phosphotransferase system, EIIB D0856_11010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0856_11010 PF02378 Phosphotransferase system, EIIC D0856_11015 PF13193 AMP-binding enzyme C-terminal domain D0856_11015 PF00501 AMP-binding enzyme D0856_11020 PF13378 Enolase C-terminal domain-like D0856_11025 PF00378 Enoyl-CoA hydratase/isomerase D0856_11030 PF12697 Alpha/beta hydrolase family D0856_11035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0856_11035 PF16582 Middle domain of thiamine pyrophosphate D0856_11035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0856_11040 PF00425 chorismate binding enzyme D0856_11045 PF00155 Aminotransferase class I and II D0856_11055 PF01966 HD domain D0856_11055 PF13286 Phosphohydrolase-associated domain D0856_11075 PF13145 PPIC-type PPIASE domain D0856_11080 PF00216 Bacterial DNA-binding protein D0856_11085 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0856_11085 PF05362 Lon protease (S16) C-terminal proteolytic domain D0856_11085 PF00004 ATPase family associated with various cellular activities (AAA) D0856_11090 PF06689 ClpX C4-type zinc finger D0856_11090 PF07724 AAA domain (Cdc48 subfamily) D0856_11090 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_11095 PF00574 Clp protease D0856_11100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_11100 PF05697 Bacterial trigger factor protein (TF) D0856_11100 PF05698 Bacterial trigger factor protein (TF) C-terminus D0856_11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_11105 PF00512 His Kinase A (phospho-acceptor) domain D0856_11105 PF02743 Cache domain D0856_11110 PF00072 Response regulator receiver domain D0856_11110 PF00158 Sigma-54 interaction domain D0856_11110 PF02954 Bacterial regulatory protein, Fis family D0856_11120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0856_11125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0856_11130 PF03480 Bacterial extracellular solute-binding protein, family 7 D0856_11135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0856_11150 PF02386 Cation transport protein D0856_11155 PF02254 TrkA-N domain D0856_11155 PF02080 TrkA-C domain D0856_11160 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_11165 PF00271 Helicase conserved C-terminal domain D0856_11165 PF00270 DEAD/DEAH box helicase D0856_11170 PF01595 Cyclin M transmembrane N-terminal domain D0856_11170 PF00571 CBS domain D0856_11170 PF03471 Transporter associated domain D0856_11175 PF00593 TonB dependent receptor D0856_11175 PF07715 TonB-dependent Receptor Plug Domain D0856_11190 PF00975 Thioesterase domain D0856_11190 PF00975 Thioesterase domain D0856_11190 PF00550 Phosphopantetheine attachment site D0856_11190 PF00668 Condensation domain D0856_11190 PF13193 AMP-binding enzyme C-terminal domain D0856_11190 PF00501 AMP-binding enzyme D0856_11190 PF00501 AMP-binding enzyme D0856_11190 PF13193 AMP-binding enzyme C-terminal domain D0856_11190 PF00668 Condensation domain D0856_11190 PF00550 Phosphopantetheine attachment site D0856_11195 PF00550 Phosphopantetheine attachment site D0856_11195 PF00857 Isochorismatase family D0856_11200 PF00501 AMP-binding enzyme D0856_11200 PF13193 AMP-binding enzyme C-terminal domain D0856_11205 PF00425 chorismate binding enzyme D0856_11240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0856_11240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0856_11245 PF04480 Protein of unknown function (DUF559) D0856_11250 PF07662 Na+ dependent nucleoside transporter C-terminus D0856_11250 PF07670 Nucleoside recognition D0856_11250 PF01773 Na+ dependent nucleoside transporter N-terminus D0856_11255 PF03466 LysR substrate binding domain D0856_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_11260 PF13406 Transglycosylase SLT domain D0856_11265 PF05166 YcgL domain D0856_11270 PF03775 Septum formation inhibitor MinC, C-terminal domain D0856_11270 PF05209 Septum formation inhibitor MinC, N-terminal domain D0856_11275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0856_11280 PF03776 Septum formation topological specificity factor MinE D0856_11285 PF00570 HRDC domain D0856_11285 PF01612 3'-5' exonuclease D0856_11290 PF13193 AMP-binding enzyme C-terminal domain D0856_11290 PF00501 AMP-binding enzyme D0856_11295 PF00561 alpha/beta hydrolase fold D0856_11300 PF03843 Outer membrane lipoprotein Slp family D0856_11310 PF00814 Glycoprotease family D0856_11315 PF04851 Type III restriction enzyme, res subunit D0856_11315 PF13307 Helicase C-terminal domain D0856_11320 PF00551 Formyl transferase D0856_11320 PF01842 ACT domain D0856_11325 PF06185 YecM protein D0856_11335 PF05746 DALR anticodon binding domain D0856_11335 PF03485 Arginyl tRNA synthetase N terminal domain D0856_11335 PF00750 tRNA synthetases class I (R) D0856_11350 PF17910 FeoB cytosolic helical domain D0856_11350 PF02421 Ferrous iron transport protein B D0856_11350 PF07670 Nucleoside recognition D0856_11350 PF07664 Ferrous iron transport protein B C terminus D0856_11355 PF04023 FeoA domain D0856_11365 PF02311 AraC-like ligand binding domain D0856_11365 PF12833 Helix-turn-helix domain D0856_11370 PF01297 Zinc-uptake complex component A periplasmic D0856_11375 PF00005 ABC transporter D0856_11380 PF00950 ABC 3 transport family D0856_11385 PF00549 CoA-ligase D0856_11385 PF02629 CoA binding domain D0856_11390 PF08442 ATP-grasp domain D0856_11390 PF00549 CoA-ligase D0856_11395 PF02817 e3 binding domain D0856_11395 PF00364 Biotin-requiring enzyme D0856_11395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0856_11400 PF02779 Transketolase, pyrimidine binding domain D0856_11400 PF16870 2-oxoglutarate dehydrogenase C-terminal D0856_11400 PF16078 2-oxoglutarate dehydrogenase N-terminus D0856_11400 PF00676 Dehydrogenase E1 component D0856_11405 PF13085 2Fe-2S iron-sulfur cluster binding domain D0856_11410 PF02910 Fumarate reductase flavoprotein C-term D0856_11410 PF00890 FAD binding domain D0856_11415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0856_11420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0856_11425 PF00285 Citrate synthase, C-terminal domain D0856_11430 PF01784 NIF3 (NGG1p interacting factor 3) D0856_11445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0856_11445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0856_11445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0856_11445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0856_11455 PF00561 alpha/beta hydrolase fold D0856_11465 PF00258 Flavodoxin D0856_11475 PF01475 Ferric uptake regulator family D0856_11480 PF08334 Type II secretion system (T2SS), protein G D0856_11480 PF07963 Prokaryotic N-terminal methylation motif D0856_11485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0856_11485 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0856_11490 PF00367 phosphotransferase system, EIIB D0856_11490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0856_11490 PF02378 Phosphotransferase system, EIIC D0856_11500 PF01979 Amidohydrolase family D0856_11505 PF00480 ROK family D0856_11505 PF01047 MarR family D0856_11510 PF02254 TrkA-N domain D0856_11510 PF00999 Sodium/hydrogen exchanger family D0856_11515 PF00733 Asparagine synthase D0856_11515 PF13537 Glutamine amidotransferase domain D0856_11520 PF02357 Transcription termination factor nusG D0856_11525 PF00854 POT family D0856_11530 PF00762 Ferrochelatase D0856_11535 PF05191 Adenylate kinase, active site lid D0856_11540 PF00183 Hsp90 protein D0856_11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_11545 PF00486 Transcriptional regulatory protein, C terminal D0856_11550 PF17323 Trans-membrane regulatory protein ToxS D0856_11565 PF12850 Calcineurin-like phosphoesterase superfamily domain D0856_11585 PF07556 Protein of unknown function (DUF1538) D0856_11590 PF07556 Protein of unknown function (DUF1538) D0856_11595 PF08338 Domain of unknown function (DUF1731) D0856_11595 PF01370 NAD dependent epimerase/dehydratase family D0856_11600 PF00106 short chain dehydrogenase D0856_11610 PF00085 Thioredoxin D0856_11615 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D0856_11620 PF01270 Glycosyl hydrolases family 8 D0856_11625 PF03170 Bacterial cellulose synthase subunit D0856_11630 PF03552 Cellulose synthase D0856_11630 PF07238 PilZ domain D0856_11630 PF00535 Glycosyl transferase family 2 D0856_11635 PF06564 Cellulose biosynthesis protein BcsQ D0856_11650 PF11658 Cellulose biosynthesis protein BcsG D0856_11655 PF16200 C-terminal region of band_7 D0856_11655 PF01145 SPFH domain / Band 7 family D0856_11685 PF03120 NAD-dependent DNA ligase OB-fold domain D0856_11685 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0856_11685 PF00533 BRCA1 C Terminus (BRCT) domain D0856_11685 PF12826 Helix-hairpin-helix motif D0856_11685 PF01653 NAD-dependent DNA ligase adenylation domain D0856_11690 PF04354 ZipA, C-terminal FtsZ-binding domain D0856_11700 PF00291 Pyridoxal-phosphate dependent enzyme D0856_11710 PF00381 PTS HPr component phosphorylation site D0856_11715 PF02896 PEP-utilising enzyme, TIM barrel domain D0856_11715 PF00391 PEP-utilising enzyme, mobile domain D0856_11715 PF05524 PEP-utilising enzyme, N-terminal D0856_11720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0856_11725 PF00669 Bacterial flagellin N-terminal helical region D0856_11725 PF07196 Flagellin hook IN motif D0856_11725 PF00700 Bacterial flagellin C-terminal helical region D0856_11730 PF00669 Bacterial flagellin N-terminal helical region D0856_11730 PF07196 Flagellin hook IN motif D0856_11730 PF00700 Bacterial flagellin C-terminal helical region D0856_11735 PF07196 Flagellin hook IN motif D0856_11735 PF00669 Bacterial flagellin N-terminal helical region D0856_11735 PF00700 Bacterial flagellin C-terminal helical region D0856_11745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_11745 PF07196 Flagellin hook IN motif D0856_11750 PF10135 Rod binding protein D0856_11750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0856_11755 PF02119 Flagellar P-ring protein D0856_11760 PF02107 Flagellar L-ring protein D0856_11765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_11765 PF00460 Flagella basal body rod protein D0856_11770 PF00460 Flagella basal body rod protein D0856_11770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_11775 PF07559 Flagellar basal body protein FlaE D0856_11775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_11775 PF00460 Flagella basal body rod protein D0856_11780 PF13860 FlgD Ig-like domain D0856_11780 PF03963 Flagellar hook capping protein - N-terminal region D0856_11780 PF13861 FlgD Tudor-like domain D0856_11785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_11785 PF00460 Flagella basal body rod protein D0856_11790 PF00460 Flagella basal body rod protein D0856_11795 PF03705 CheR methyltransferase, all-alpha domain D0856_11795 PF01739 CheR methyltransferase, SAM binding domain D0856_11800 PF01584 CheW-like domain D0856_11800 PF00072 Response regulator receiver domain D0856_11845 PF00691 OmpA family D0856_11845 PF01389 OmpA-like transmembrane domain D0856_11850 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0856_11855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0856_11860 PF13609 Gram-negative porin D0856_11870 PF00403 Heavy-metal-associated domain D0856_11885 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D0856_11885 PF00728 Glycosyl hydrolase family 20, catalytic domain D0856_11885 PF02838 Glycosyl hydrolase family 20, domain 2 D0856_11885 PF03173 Putative carbohydrate binding domain D0856_11905 PF01713 Smr domain D0856_11910 PF01479 S4 domain D0856_11910 PF00849 RNA pseudouridylate synthase D0856_11915 PF04073 Aminoacyl-tRNA editing domain D0856_11920 PF00149 Calcineurin-like phosphoesterase D0856_11920 PF02872 5'-nucleotidase, C-terminal domain D0856_11925 PF00793 DAHP synthetase I family D0856_11930 PF13369 Transglutaminase-like superfamily D0856_11935 PF04247 Invasion gene expression up-regulator, SirB D0856_11940 PF17827 PrmC N-terminal domain D0856_11940 PF13847 Methyltransferase domain D0856_11945 PF03462 PCRF domain D0856_11945 PF00472 RF-1 domain D0856_11950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0856_11950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0856_11950 PF01488 Shikimate / quinate 5-dehydrogenase D0856_11955 PF03550 Outer membrane lipoprotein LolB D0856_11960 PF08544 GHMP kinases C terminal D0856_11960 PF00288 GHMP kinases N terminal domain D0856_11965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0856_11965 PF14572 Phosphoribosyl synthetase-associated domain D0856_11970 PF01195 Peptidyl-tRNA hydrolase D0856_11975 PF06071 Protein of unknown function (DUF933) D0856_11975 PF01926 50S ribosome-binding GTPase D0856_12085 PF01494 FAD binding domain D0856_12095 PF04055 Radical SAM superfamily D0856_12095 PF00919 Uncharacterized protein family UPF0004 D0856_12095 PF01938 TRAM domain D0856_12100 PF02562 PhoH-like protein D0856_12105 PF02130 Uncharacterized protein family UPF0054 D0856_12110 PF03471 Transporter associated domain D0856_12110 PF00571 CBS domain D0856_12115 PF00795 Carbon-nitrogen hydrolase D0856_12120 PF07295 Zinc-ribbon containing domain D0856_12125 PF08264 Anticodon-binding domain of tRNA D0856_12125 PF00133 tRNA synthetases class I (I, L, M and V) D0856_12125 PF13603 Leucyl-tRNA synthetase, Domain 2 D0856_12130 PF04390 Lipopolysaccharide-assembly D0856_12135 PF06144 DNA polymerase III, delta subunit D0856_12135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0856_12145 PF02590 Predicted SPOUT methyltransferase D0856_12150 PF00905 Penicillin binding protein transpeptidase domain D0856_12150 PF03717 Penicillin-binding Protein dimerisation domain D0856_12155 PF01098 Cell cycle protein D0856_12160 PF05036 Sporulation related domain D0856_12160 PF03330 Lytic transglycolase D0856_12165 PF07943 Penicillin-binding protein 5, C-terminal domain D0856_12165 PF00768 D-alanyl-D-alanine carboxypeptidase D0856_12170 PF04359 Protein of unknown function (DUF493) D0856_12175 PF03099 Biotin/lipoate A/B protein ligase family D0856_12180 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0856_12180 PF04055 Radical SAM superfamily D0856_12185 PF00464 Serine hydroxymethyltransferase D0856_12190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0856_12190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D0856_12205 PF16657 Maltogenic Amylase, C-terminal domain D0856_12205 PF00128 Alpha amylase, catalytic domain D0856_12210 PF00367 phosphotransferase system, EIIB D0856_12210 PF02378 Phosphotransferase system, EIIC D0856_12215 PF00356 Bacterial regulatory proteins, lacI family D0856_12225 PF09383 NIL domain D0856_12225 PF00005 ABC transporter D0856_12230 PF00528 Binding-protein-dependent transport system inner membrane component D0856_12235 PF03180 NLPA lipoprotein D0856_12245 PF02872 5'-nucleotidase, C-terminal domain D0856_12245 PF00149 Calcineurin-like phosphoesterase D0856_12250 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D0856_12255 PF07348 Syd protein (SUKH-2) D0856_12260 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0856_12260 PF14489 QueF-like protein D0856_12270 PF00990 Diguanylate cyclase, GGDEF domain D0856_12270 PF00072 Response regulator receiver domain D0856_12275 PF03641 Possible lysine decarboxylase D0856_12275 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0856_12275 PF11892 Domain of unknown function (DUF3412) D0856_12280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0856_12280 PF01367 5'-3' exonuclease, C-terminal SAM fold D0856_12285 PF01728 FtsJ-like methyltransferase D0856_12285 PF18125 RlmM ferredoxin-like domain D0856_12290 PF04241 Protein of unknown function (DUF423) D0856_12300 PF03466 LysR substrate binding domain D0856_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_12305 PF02568 Thiamine biosynthesis protein (ThiI) D0856_12305 PF02926 THUMP domain D0856_12310 PF00691 OmpA family D0856_12310 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0856_12310 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0856_12310 PF00691 OmpA family D0856_12315 PF01618 MotA/TolQ/ExbB proton channel family D0856_12320 PF02609 Exonuclease VII small subunit D0856_12325 PF00348 Polyprenyl synthetase D0856_12330 PF02779 Transketolase, pyrimidine binding domain D0856_12330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0856_12330 PF02780 Transketolase, C-terminal domain D0856_12335 PF04608 Phosphatidylglycerophosphatase A D0856_12340 PF02769 AIR synthase related protein, C-terminal domain D0856_12340 PF00586 AIR synthase related protein, N-terminal domain D0856_12345 PF01029 NusB family D0856_12350 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0856_12355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0856_12355 PF00925 GTP cyclohydrolase II D0856_12360 PF00677 Lumazine binding domain D0856_12365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0856_12365 PF01872 RibD C-terminal domain D0856_12370 PF03477 ATP cone domain D0856_12375 PF00171 Aldehyde dehydrogenase family D0856_12380 PF01472 PUA domain D0856_12380 PF00696 Amino acid kinase family D0856_12385 PF07417 Sigma factor-binding transcriptional regulator Crl D0856_12395 PF00156 Phosphoribosyl transferase domain D0856_12400 PF00860 Permease family D0856_12405 PF07687 Peptidase dimerisation domain D0856_12405 PF01546 Peptidase family M20/M25/M40 D0856_12420 PF00593 TonB dependent receptor D0856_12420 PF07715 TonB-dependent Receptor Plug Domain D0856_12445 PF01464 Transglycosylase SLT domain D0856_12445 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_12455 PF14437 MafB19-like deaminase D0856_12460 PF03806 AbgT putative transporter family D0856_12480 PF07963 Prokaryotic N-terminal methylation motif D0856_12480 PF00114 Pilin (bacterial filament) D0856_12485 PF07963 Prokaryotic N-terminal methylation motif D0856_12485 PF00114 Pilin (bacterial filament) D0856_12490 PF00684 DnaJ central domain D0856_12490 PF01556 DnaJ C terminal domain D0856_12490 PF00226 DnaJ domain D0856_12495 PF00012 Hsp70 protein D0856_12505 PF00375 Sodium:dicarboxylate symporter family D0856_12510 PF01025 GrpE D0856_12515 PF01513 ATP-NAD kinase D0856_12525 PF02463 RecF/RecN/SMC N terminal domain D0856_12530 PF00583 Acetyltransferase (GNAT) family D0856_12535 PF04355 SmpA / OmlA family D0856_12545 PF03658 RnfH family Ubiquitin D0856_12550 PF03364 Polyketide cyclase / dehydrase and lipid transport D0856_12555 PF01668 SmpB protein D0856_12565 PF03466 LysR substrate binding domain D0856_12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_12570 PF12805 FUSC-like inner membrane protein yccS D0856_12590 PF00202 Aminotransferase class-III D0856_12595 PF01053 Cys/Met metabolism PLP-dependent enzyme D0856_12600 PF00924 Mechanosensitive ion channel D0856_12615 PF03466 LysR substrate binding domain D0856_12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_12620 PF01266 FAD dependent oxidoreductase D0856_12625 PF01235 Sodium:alanine symporter family D0856_12630 PF01184 GPR1/FUN34/yaaH family D0856_12635 PF06483 Chitinase C D0856_12635 PF00704 Glycosyl hydrolases family 18 D0856_12640 PF03553 Na+/H+ antiporter family D0856_12645 PF02540 NAD synthase D0856_12645 PF00117 Glutamine amidotransferase class-I D0856_12645 PF00958 GMP synthase C terminal domain D0856_12650 PF00571 CBS domain D0856_12650 PF00478 IMP dehydrogenase / GMP reductase domain D0856_12655 PF02601 Exonuclease VII, large subunit D0856_12655 PF13742 OB-fold nucleic acid binding domain D0856_12665 PF00990 Diguanylate cyclase, GGDEF domain D0856_12665 PF13185 GAF domain D0856_12675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0856_12675 PF01926 50S ribosome-binding GTPase D0856_12680 PF13360 PQQ-like domain D0856_12685 PF09976 Tetratricopeptide repeat-like domain D0856_12690 PF13393 Histidyl-tRNA synthetase D0856_12690 PF03129 Anticodon binding domain D0856_12695 PF04551 GcpE protein D0856_12700 PF13464 Domain of unknown function (DUF4115) D0856_12705 PF04055 Radical SAM superfamily D0856_12710 PF00334 Nucleoside diphosphate kinase D0856_12715 PF12404 Peptidase D0856_12715 PF00883 Cytosol aminopeptidase family, catalytic domain D0856_12720 PF04384 Iron-sulphur cluster assembly D0856_12725 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_12730 PF00012 Hsp70 protein D0856_12735 PF00226 DnaJ domain D0856_12735 PF07743 HSCB C-terminal oligomerisation domain D0856_12740 PF01521 Iron-sulphur cluster biosynthesis D0856_12745 PF01592 NifU-like N terminal domain D0856_12750 PF00266 Aminotransferase class-V D0856_12755 PF02082 Transcriptional regulator D0856_12760 PF00588 SpoU rRNA Methylase family D0856_12765 PF00459 Inositol monophosphatase family D0856_12770 PF02355 Protein export membrane protein D0856_12770 PF07549 SecD/SecF GG Motif D0856_12775 PF07549 SecD/SecF GG Motif D0856_12775 PF13721 SecD export protein N-terminal TM region D0856_12775 PF02355 Protein export membrane protein D0856_12780 PF02699 Preprotein translocase subunit D0856_12785 PF01702 Queuine tRNA-ribosyltransferase D0856_12790 PF02547 Queuosine biosynthesis protein D0856_12805 PF00571 CBS domain D0856_12810 PF00463 Isocitrate lyase family D0856_12815 PF01274 Malate synthase D0856_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_12820 PF03466 LysR substrate binding domain D0856_12825 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0856_12825 PF00578 AhpC/TSA family D0856_12830 PF03932 CutC family D0856_12835 PF03976 Polyphosphate kinase 2 (PPK2) D0856_12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_12840 PF03466 LysR substrate binding domain D0856_12855 PF01895 PhoU domain D0856_12860 PF00005 ABC transporter D0856_12870 PF00528 Binding-protein-dependent transport system inner membrane component D0856_12875 PF13089 Polyphosphate kinase N-terminal domain D0856_12875 PF02503 Polyphosphate kinase middle domain D0856_12875 PF13090 Polyphosphate kinase C-terminal domain 2 D0856_12875 PF17941 Polyphosphate kinase C-terminal domain 1 D0856_12880 PF02541 Ppx/GppA phosphatase family D0856_12885 PF12849 PBP superfamily domain D0856_12890 PF00512 His Kinase A (phospho-acceptor) domain D0856_12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_12890 PF11808 Phosphate regulon sensor protein PhoR D0856_12890 PF00989 PAS fold D0856_12895 PF00486 Transcriptional regulatory protein, C terminal D0856_12895 PF00072 Response regulator receiver domain D0856_12900 PF04381 Putative exonuclease, RdgC D0856_12910 PF00037 4Fe-4S binding domain D0856_12970 PF02861 Clp amino terminal domain, pathogenicity island component D0856_12970 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_12970 PF17871 AAA lid domain D0856_12970 PF07724 AAA domain (Cdc48 subfamily) D0856_12970 PF00004 ATPase family associated with various cellular activities (AAA) D0856_12980 PF00849 RNA pseudouridylate synthase D0856_12980 PF01479 S4 domain D0856_12985 PF13525 Outer membrane lipoprotein D0856_12990 PF01464 Transglycosylase SLT domain D0856_12995 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0856_13000 PF00800 Prephenate dehydratase D0856_13000 PF01817 Chorismate mutase type II D0856_13005 PF01931 Protein of unknown function DUF84 D0856_13010 PF01371 Trp repressor protein D0856_13015 PF01464 Transglycosylase SLT domain D0856_13015 PF14718 Soluble lytic murein transglycosylase L domain D0856_13020 PF12848 ABC transporter D0856_13020 PF00005 ABC transporter D0856_13025 PF07238 PilZ domain D0856_13030 PF04225 Opacity-associated protein A LysM-like domain D0856_13030 PF01551 Peptidase family M23 D0856_13035 PF01817 Chorismate mutase type II D0856_13035 PF02153 Prephenate dehydrogenase D0856_13040 PF00793 DAHP synthetase I family D0856_13045 PF00933 Glycosyl hydrolase family 3 N terminal domain D0856_13050 PF03702 Anhydro-N-acetylmuramic acid kinase D0856_13055 PF01380 SIS domain D0856_13070 PF02554 Carbon starvation protein CstA D0856_13075 PF07694 5TMR of 5TMR-LYT D0856_13075 PF06580 Histidine kinase D0856_13080 PF04397 LytTr DNA-binding domain D0856_13080 PF00072 Response regulator receiver domain D0856_13085 PF02401 LytB protein D0856_13090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_13095 PF01252 Signal peptidase (SPase) II D0856_13100 PF08264 Anticodon-binding domain of tRNA D0856_13100 PF00133 tRNA synthetases class I (I, L, M and V) D0856_13100 PF06827 Zinc finger found in FPG and IleRS D0856_13105 PF01687 Riboflavin kinase D0856_13105 PF06574 FAD synthetase D0856_13110 PF03023 Lipid II flippase MurJ D0856_13115 PF01649 Ribosomal protein S20 D0856_13120 PF01022 Bacterial regulatory protein, arsR family D0856_13125 PF03466 LysR substrate binding domain D0856_13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_13130 PF02690 Na+/Pi-cotransporter D0856_13140 PF00303 Thymidylate synthase D0856_13145 PF01790 Prolipoprotein diacylglyceryl transferase D0856_13150 PF01925 Sulfite exporter TauE/SafE D0856_13155 PF01590 GAF domain D0856_13155 PF00391 PEP-utilising enzyme, mobile domain D0856_13155 PF02896 PEP-utilising enzyme, TIM barrel domain D0856_13155 PF05524 PEP-utilising enzyme, N-terminal D0856_13160 PF00293 NUDIX domain D0856_13165 PF02976 DNA mismatch repair enzyme MutH D0856_13175 PF00248 Aldo/keto reductase family D0856_13185 PF00158 Sigma-54 interaction domain D0856_13185 PF00072 Response regulator receiver domain D0856_13185 PF02954 Bacterial regulatory protein, Fis family D0856_13190 PF01336 OB-fold nucleic acid binding domain D0856_13190 PF00152 tRNA synthetases class II (D, K and N) D0856_13200 PF17768 RecJ OB domain D0856_13200 PF02272 DHHA1 domain D0856_13200 PF01368 DHH family D0856_13205 PF10411 Disulfide bond isomerase protein N-terminus D0856_13205 PF13098 Thioredoxin-like domain D0856_13210 PF02899 Phage integrase, N-terminal SAM-like domain D0856_13210 PF00589 Phage integrase family D0856_13215 PF00258 Flavodoxin D0856_13220 PF05525 Branched-chain amino acid transport protein D0856_13225 PF05175 Methyltransferase small domain D0856_13230 PF00271 Helicase conserved C-terminal domain D0856_13230 PF00270 DEAD/DEAH box helicase D0856_13240 PF03883 Peroxide stress protein YaaA D0856_13245 PF01235 Sodium:alanine symporter family D0856_13260 PF03167 Uracil DNA glycosylase superfamily D0856_13265 PF01261 Xylose isomerase-like TIM barrel D0856_13270 PF01228 Glycine radical D0856_13280 PF14821 Threonine synthase N terminus D0856_13280 PF00291 Pyridoxal-phosphate dependent enzyme D0856_13285 PF00288 GHMP kinases N terminal domain D0856_13285 PF08544 GHMP kinases C terminal D0856_13290 PF03447 Homoserine dehydrogenase, NAD binding domain D0856_13290 PF00742 Homoserine dehydrogenase D0856_13290 PF00696 Amino acid kinase family D0856_13290 PF13840 ACT domain D0856_13290 PF01842 ACT domain D0856_13300 PF03737 Aldolase/RraA D0856_13315 PF00486 Transcriptional regulatory protein, C terminal D0856_13315 PF00072 Response regulator receiver domain D0856_13325 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0856_13325 PF01627 Hpt domain D0856_13325 PF00989 PAS fold D0856_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_13325 PF00072 Response regulator receiver domain D0856_13325 PF00512 His Kinase A (phospho-acceptor) domain D0856_13330 PF00990 Diguanylate cyclase, GGDEF domain D0856_13330 PF01590 GAF domain D0856_13330 PF00563 EAL domain D0856_13330 PF00360 Phytochrome region D0856_13335 PF04055 Radical SAM superfamily D0856_13335 PF16199 Radical_SAM C-terminal domain D0856_13340 PF01645 Conserved region in glutamate synthase D0856_13340 PF00310 Glutamine amidotransferases class-II D0856_13340 PF04898 Glutamate synthase central domain D0856_13340 PF01493 GXGXG motif D0856_13345 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_13345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0856_13350 PF00310 Glutamine amidotransferases class-II D0856_13350 PF04898 Glutamate synthase central domain D0856_13350 PF01645 Conserved region in glutamate synthase D0856_13350 PF01493 GXGXG motif D0856_13355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0856_13355 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_13365 PF01048 Phosphorylase superfamily D0856_13375 PF01497 Periplasmic binding protein D0856_13380 PF03458 UPF0126 domain D0856_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_13385 PF03466 LysR substrate binding domain D0856_13390 PF01925 Sulfite exporter TauE/SafE D0856_13405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0856_13405 PF02142 MGS-like domain D0856_13405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0856_13410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0856_13410 PF00117 Glutamine amidotransferase class-I D0856_13415 PF05173 Dihydrodipicolinate reductase, C-terminus D0856_13415 PF01113 Dihydrodipicolinate reductase, N-terminus D0856_13420 PF00293 NUDIX domain D0856_13425 PF02810 SEC-C motif D0856_13425 PF07517 SecA DEAD-like domain D0856_13425 PF01043 SecA preprotein cross-linking domain D0856_13425 PF07516 SecA Wing and Scaffold domain D0856_13435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0856_13440 PF12327 FtsZ family, C-terminal domain D0856_13440 PF00091 Tubulin/FtsZ family, GTPase domain D0856_13445 PF02491 SHS2 domain inserted in FTSA D0856_13450 PF03799 Cell division protein FtsQ D0856_13450 PF08478 POTRA domain, FtsQ-type D0856_13455 PF02875 Mur ligase family, glutamate ligase domain D0856_13455 PF08245 Mur ligase middle domain D0856_13455 PF01225 Mur ligase family, catalytic domain D0856_13460 PF03033 Glycosyltransferase family 28 N-terminal domain D0856_13460 PF04101 Glycosyltransferase family 28 C-terminal domain D0856_13465 PF01098 Cell cycle protein D0856_13470 PF08245 Mur ligase middle domain D0856_13470 PF02875 Mur ligase family, glutamate ligase domain D0856_13475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0856_13475 PF00953 Glycosyl transferase family 4 D0856_13480 PF02875 Mur ligase family, glutamate ligase domain D0856_13480 PF01225 Mur ligase family, catalytic domain D0856_13480 PF08245 Mur ligase middle domain D0856_13485 PF08245 Mur ligase middle domain D0856_13485 PF02875 Mur ligase family, glutamate ligase domain D0856_13485 PF01225 Mur ligase family, catalytic domain D0856_13490 PF03717 Penicillin-binding Protein dimerisation domain D0856_13490 PF00905 Penicillin binding protein transpeptidase domain D0856_13495 PF04999 Cell division protein FtsL D0856_13500 PF01795 MraW methylase family D0856_13515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_13520 PF04348 LppC putative lipoprotein D0856_13525 PF02021 Uncharacterised protein family UPF0102 D0856_13530 PF13580 SIS domain D0856_13535 PF04972 BON domain D0856_13540 PF04386 Stringent starvation protein B D0856_13545 PF00043 Glutathione S-transferase, C-terminal domain D0856_13545 PF02798 Glutathione S-transferase, N-terminal domain D0856_13550 PF02167 Cytochrome C1 family D0856_13555 PF00033 Cytochrome b/b6/petB D0856_13555 PF00032 Cytochrome b(C-terminal)/b6/petD D0856_13560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D0856_13560 PF00355 Rieske [2Fe-2S] domain D0856_13565 PF00380 Ribosomal protein S9/S16 D0856_13570 PF00572 Ribosomal protein L13 D0856_13580 PF03969 AFG1-like ATPase D0856_13590 PF06295 Protein of unknown function (DUF1043) D0856_13595 PF00595 PDZ domain D0856_13600 PF13180 PDZ domain D0856_13605 PF03989 DNA gyrase C-terminal domain, beta-propeller D0856_13605 PF00521 DNA gyrase/topoisomerase IV, subunit A D0856_13610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_13610 PF00986 DNA gyrase B subunit, carboxyl terminus D0856_13610 PF00204 DNA gyrase B D0856_13610 PF01751 Toprim domain D0856_13615 PF05728 Uncharacterised protein family (UPF0227) D0856_13620 PF00149 Calcineurin-like phosphoesterase D0856_13625 PF06853 Protein of unknown function (DUF1249) D0856_13630 PF00293 NUDIX domain D0856_13635 PF02321 Outer membrane efflux protein D0856_13640 PF00294 pfkB family carbohydrate kinase D0856_13640 PF01467 Cytidylyltransferase-like D0856_13645 PF03710 Glutamate-ammonia ligase adenylyltransferase D0856_13645 PF08335 GlnD PII-uridylyltransferase D0856_13650 PF00672 HAMP domain D0856_13650 PF02743 Cache domain D0856_13650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_13655 PF07885 Ion channel D0856_13660 PF01928 CYTH domain D0856_13665 PF01865 Protein of unknown function DUF47 D0856_13670 PF01384 Phosphate transporter family D0856_13675 PF08239 Bacterial SH3 domain D0856_13695 PF01471 Putative peptidoglycan binding domain D0856_13695 PF13401 AAA domain D0856_13700 PF01966 HD domain D0856_13700 PF01743 Poly A polymerase head domain D0856_13700 PF12627 Probable RNA and SrmB- binding site of polymerase A D0856_13705 PF02673 Bacitracin resistance protein BacA D0856_13710 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0856_13715 PF02152 Dihydroneopterin aldolase D0856_13720 PF02660 Glycerol-3-phosphate acyltransferase D0856_13725 PF00561 alpha/beta hydrolase fold D0856_13730 PF00814 Glycoprotease family D0856_13735 PF01165 Ribosomal protein S21 D0856_13740 PF09424 Yqey-like protein D0856_13745 PF10410 DnaB-helicase binding domain of primase D0856_13745 PF08278 DNA primase DnaG DnaB-binding D0856_13745 PF08275 DNA primase catalytic core, N-terminal domain D0856_13745 PF01807 CHC2 zinc finger D0856_13750 PF03979 Sigma-70 factor, region 1.1 D0856_13750 PF00140 Sigma-70 factor, region 1.2 D0856_13750 PF04542 Sigma-70 region 2 D0856_13750 PF04539 Sigma-70 region 3 D0856_13750 PF04545 Sigma-70, region 4 D0856_13750 PF04546 Sigma-70, non-essential region D0856_13820 PF01555 DNA methylase D0856_13825 PF00589 Phage integrase family D0856_13825 PF14659 Phage integrase, N-terminal SAM-like domain D0856_13825 PF13356 Arm DNA-binding domain D0856_13850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_13850 PF02378 Phosphotransferase system, EIIC D0856_13850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_13855 PF08125 Mannitol dehydrogenase C-terminal domain D0856_13855 PF01232 Mannitol dehydrogenase Rossmann domain D0856_13860 PF05068 Mannitol repressor D0856_13865 PF13419 Haloacid dehalogenase-like hydrolase D0856_13870 PF00672 HAMP domain D0856_13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_13870 PF00512 His Kinase A (phospho-acceptor) domain D0856_13875 PF00072 Response regulator receiver domain D0856_13875 PF00486 Transcriptional regulatory protein, C terminal D0856_13890 PF01380 SIS domain D0856_13895 PF08220 DeoR-like helix-turn-helix domain D0856_13895 PF00455 DeoR C terminal sensor domain D0856_13905 PF00224 Pyruvate kinase, barrel domain D0856_13905 PF02887 Pyruvate kinase, alpha/beta domain D0856_13915 PF17158 Membrane-associated sensor, integral membrane domain D0856_13915 PF00990 Diguanylate cyclase, GGDEF domain D0856_13920 PF10369 Small subunit of acetolactate synthase D0856_13925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0856_13925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0856_13925 PF00205 Thiamine pyrophosphate enzyme, central domain D0856_13930 PF00501 AMP-binding enzyme D0856_13935 PF03466 LysR substrate binding domain D0856_13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_13945 PF01569 PAP2 superfamily D0856_13965 PF00682 HMGL-like D0856_13965 PF08502 LeuA allosteric (dimerisation) domain D0856_13970 PF00180 Isocitrate/isopropylmalate dehydrogenase D0856_13975 PF00330 Aconitase family (aconitate hydratase) D0856_13980 PF00694 Aconitase C-terminal domain D0856_13990 PF00226 DnaJ domain D0856_13990 PF05099 Tellurite resistance protein TerB D0856_13995 PF04453 LPS transport system D D0856_13995 PF03968 OstA-like protein D0856_14000 PF09312 SurA N-terminal domain D0856_14005 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0856_14010 PF00398 Ribosomal RNA adenine dimethylase D0856_14015 PF04379 ApaG domain D0856_14020 PF00149 Calcineurin-like phosphoesterase D0856_14025 PF00186 Dihydrofolate reductase D0856_14030 PF12821 Threonine/Serine exporter, ThrE D0856_14035 PF06738 Putative threonine/serine exporter D0856_14040 PF01018 GTP1/OBG D0856_14040 PF01926 50S ribosome-binding GTPase D0856_14045 PF01016 Ribosomal L27 protein D0856_14050 PF00829 Ribosomal prokaryotic L21 protein D0856_14055 PF00348 Polyprenyl synthetase D0856_14065 PF00056 lactate/malate dehydrogenase, NAD binding domain D0856_14065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0856_14070 PF01316 Arginine repressor, DNA binding domain D0856_14070 PF02863 Arginine repressor, C-terminal domain D0856_14080 PF16868 NMT1-like family D0856_14095 PF00005 ABC transporter D0856_14100 PF00528 Binding-protein-dependent transport system inner membrane component D0856_14110 PF02441 Flavoprotein D0856_14115 PF08245 Mur ligase middle domain D0856_14115 PF02875 Mur ligase family, glutamate ligase domain D0856_14115 PF01225 Mur ligase family, catalytic domain D0856_14120 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0856_14125 PF00719 Inorganic pyrophosphatase D0856_14140 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0856_14145 PF04357 TamB, inner membrane protein subunit of TAM complex D0856_14150 PF17243 POTRA domain TamA domain 1 D0856_14150 PF07244 Surface antigen variable number repeat D0856_14150 PF01103 Surface antigen D0856_14155 PF01625 Peptide methionine sulfoxide reductase D0856_14165 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0856_14170 PF10795 Protein of unknown function (DUF2607) D0856_14180 PF00005 ABC transporter D0856_14205 PF02080 TrkA-C domain D0856_14205 PF03600 Citrate transporter D0856_14210 PF00009 Elongation factor Tu GTP binding domain D0856_14215 PF01507 Phosphoadenosine phosphosulfate reductase family D0856_14220 PF10414 Sirohaem synthase dimerisation region D0856_14220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_14220 PF14824 Sirohaem biosynthesis protein central D0856_14225 PF00149 Calcineurin-like phosphoesterase D0856_14225 PF02872 5'-nucleotidase, C-terminal domain D0856_14240 PF00271 Helicase conserved C-terminal domain D0856_14240 PF03880 DbpA RNA binding domain D0856_14240 PF00270 DEAD/DEAH box helicase D0856_14245 PF13673 Acetyltransferase (GNAT) domain D0856_14260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0856_14260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_14270 PF01196 Ribosomal protein L17 D0856_14275 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0856_14275 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0856_14275 PF01000 RNA polymerase Rpb3/RpoA insert domain D0856_14280 PF01479 S4 domain D0856_14280 PF00163 Ribosomal protein S4/S9 N-terminal domain D0856_14285 PF00411 Ribosomal protein S11 D0856_14290 PF00416 Ribosomal protein S13/S18 D0856_14295 PF00444 Ribosomal protein L36 D0856_14300 PF00344 SecY translocase D0856_14305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0856_14310 PF00327 Ribosomal protein L30p/L7e D0856_14315 PF00333 Ribosomal protein S5, N-terminal domain D0856_14315 PF03719 Ribosomal protein S5, C-terminal domain D0856_14320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0856_14325 PF00347 Ribosomal protein L6 D0856_14330 PF00410 Ribosomal protein S8 D0856_14335 PF00253 Ribosomal protein S14p/S29e D0856_14340 PF00281 Ribosomal protein L5 D0856_14340 PF00673 ribosomal L5P family C-terminus D0856_14345 PF00467 KOW motif D0856_14345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0856_14350 PF00238 Ribosomal protein L14p/L23e D0856_14355 PF00366 Ribosomal protein S17 D0856_14360 PF00831 Ribosomal L29 protein D0856_14365 PF00252 Ribosomal protein L16p/L10e D0856_14370 PF00189 Ribosomal protein S3, C-terminal domain D0856_14370 PF07650 KH domain D0856_14375 PF00237 Ribosomal protein L22p/L17e D0856_14380 PF00203 Ribosomal protein S19 D0856_14385 PF00181 Ribosomal Proteins L2, RNA binding domain D0856_14385 PF03947 Ribosomal Proteins L2, C-terminal domain D0856_14390 PF00276 Ribosomal protein L23 D0856_14400 PF00297 Ribosomal protein L3 D0856_14405 PF00338 Ribosomal protein S10p/S20e D0856_14410 PF01197 Ribosomal protein L31 D0856_14420 PF00271 Helicase conserved C-terminal domain D0856_14420 PF17764 3′ DNA-binding domain (3′BD) D0856_14420 PF18074 Primosomal protein N C-terminal domain D0856_14420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0856_14420 PF00270 DEAD/DEAH box helicase D0856_14425 PF00356 Bacterial regulatory proteins, lacI family D0856_14435 PF00227 Proteasome subunit D0856_14440 PF00004 ATPase family associated with various cellular activities (AAA) D0856_14440 PF07724 AAA domain (Cdc48 subfamily) D0856_14445 PF01040 UbiA prenyltransferase family D0856_14450 PF03737 Aldolase/RraA D0856_14460 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0856_14465 PF08220 DeoR-like helix-turn-helix domain D0856_14465 PF00455 DeoR C terminal sensor domain D0856_14485 PF00121 Triosephosphate isomerase D0856_14490 PF10996 Beta-Casp domain D0856_14490 PF00753 Metallo-beta-lactamase superfamily D0856_14490 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D0856_14495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0856_14495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0856_14495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0856_14500 PF02719 Polysaccharide biosynthesis protein D0856_14505 PF02397 Bacterial sugar transferase D0856_14510 PF01370 NAD dependent epimerase/dehydratase family D0856_14515 PF00535 Glycosyl transferase family 2 D0856_14530 PF13439 Glycosyltransferase Family 4 D0856_14530 PF00534 Glycosyl transferases group 1 D0856_14535 PF00535 Glycosyl transferase family 2 D0856_14575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D0856_14590 PF16363 GDP-mannose 4,6 dehydratase D0856_14600 PF02563 Polysaccharide biosynthesis/export protein D0856_14600 PF10531 SLBB domain D0856_14600 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0856_14625 PF06082 Exopolysaccharide biosynthesis protein YbjH D0856_14630 PF01370 NAD dependent epimerase/dehydratase family D0856_14635 PF03279 Bacterial lipid A biosynthesis acyltransferase D0856_14640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0856_14645 PF00534 Glycosyl transferases group 1 D0856_14645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0856_14665 PF08666 SAF domain D0856_14665 PF03102 NeuB family D0856_14675 PF02348 Cytidylyltransferase D0856_14680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0856_14685 PF02719 Polysaccharide biosynthesis protein D0856_14695 PF01219 Prokaryotic diacylglycerol kinase D0856_14700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0856_14705 PF00535 Glycosyl transferase family 2 D0856_14710 PF00534 Glycosyl transferases group 1 D0856_14710 PF13439 Glycosyltransferase Family 4 D0856_14715 PF01467 Cytidylyltransferase-like D0856_14720 PF05686 Glycosyl transferase family 90 D0856_14725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0856_14725 PF06827 Zinc finger found in FPG and IleRS D0856_14725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0856_14735 PF00471 Ribosomal protein L33 D0856_14740 PF00830 Ribosomal L28 family D0856_14745 PF04002 RadC-like JAB domain D0856_14750 PF00672 HAMP domain D0856_14750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_14750 PF17200 Single Cache domain 2 D0856_14760 PF04127 DNA / pantothenate metabolism flavoprotein D0856_14760 PF02441 Flavoprotein D0856_14765 PF00440 Bacterial regulatory proteins, tetR family D0856_14770 PF03279 Bacterial lipid A biosynthesis acyltransferase D0856_14780 PF01138 3' exoribonuclease family, domain 1 D0856_14780 PF03725 3' exoribonuclease family, domain 2 D0856_14785 PF08340 Domain of unknown function (DUF1732) D0856_14785 PF03755 YicC-like family, N-terminal region D0856_14790 PF00072 Response regulator receiver domain D0856_14790 PF00486 Transcriptional regulatory protein, C terminal D0856_14800 PF00892 EamA-like transporter family D0856_14815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_14815 PF00005 ABC transporter D0856_14820 PF00005 ABC transporter D0856_14820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_14825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_14830 PF12911 N-terminal TM domain of oligopeptide transport permease C D0856_14830 PF00528 Binding-protein-dependent transport system inner membrane component D0856_14835 PF00528 Binding-protein-dependent transport system inner membrane component D0856_14845 PF00593 TonB dependent receptor D0856_14845 PF07715 TonB-dependent Receptor Plug Domain D0856_14860 PF01618 MotA/TolQ/ExbB proton channel family D0856_14865 PF02472 Biopolymer transport protein ExbD/TolR D0856_14880 PF00625 Guanylate kinase D0856_14885 PF01192 RNA polymerase Rpb6 D0856_14890 PF04607 Region found in RelA / SpoT proteins D0856_14890 PF02824 TGS domain D0856_14890 PF13291 ACT domain D0856_14895 PF12105 SpoU, rRNA methylase, C-terminal D0856_14895 PF00588 SpoU rRNA Methylase family D0856_14900 PF00270 DEAD/DEAH box helicase D0856_14900 PF00271 Helicase conserved C-terminal domain D0856_14900 PF17191 RecG wedge domain D0856_14905 PF00326 Prolyl oligopeptidase family D0856_14910 PF00860 Permease family D0856_14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_14915 PF00672 HAMP domain D0856_14915 PF00512 His Kinase A (phospho-acceptor) domain D0856_14920 PF00486 Transcriptional regulatory protein, C terminal D0856_14920 PF00072 Response regulator receiver domain D0856_14925 PF01272 Transcription elongation factor, GreA/GreB, C-term D0856_14925 PF03449 Transcription elongation factor, N-terminal D0856_14935 PF17674 HHH domain D0856_14935 PF16921 Tex protein YqgF-like domain D0856_14935 PF09371 Tex-like protein N-terminal domain D0856_14935 PF00575 S1 RNA binding domain D0856_14945 PF00561 alpha/beta hydrolase fold D0856_14950 PF00156 Phosphoribosyl transferase domain D0856_14955 PF01521 Iron-sulphur cluster biosynthesis D0856_14955 PF01106 NifU-like domain D0856_14960 PF00293 NUDIX domain D0856_14965 PF00459 Inositol monophosphatase family D0856_14970 PF01203 Type II secretion system (T2SS), protein N D0856_14975 PF04612 Type II secretion system (T2SS), protein M D0856_14980 PF12693 GspL periplasmic domain D0856_14980 PF05134 Type II secretion system (T2SS), protein L D0856_14985 PF03934 Type II secretion system (T2SS), protein K D0856_14990 PF11612 Type II secretion system (T2SS), protein J D0856_14990 PF07963 Prokaryotic N-terminal methylation motif D0856_14995 PF07963 Prokaryotic N-terminal methylation motif D0856_14995 PF02501 Type II secretion system (T2SS), protein I D0856_15000 PF12019 Type II transport protein GspH D0856_15005 PF07963 Prokaryotic N-terminal methylation motif D0856_15005 PF08334 Type II secretion system (T2SS), protein G D0856_15010 PF00482 Type II secretion system (T2SS), protein F D0856_15015 PF00437 Type II/IV secretion system protein D0856_15020 PF03958 Bacterial type II/III secretion system short domain D0856_15020 PF00263 Bacterial type II and III secretion system protein D0856_15025 PF11356 Type II secretion system protein C D0856_15030 PF01479 S4 domain D0856_15035 PF01430 Hsp33 protein D0856_15040 PF01293 Phosphoenolpyruvate carboxykinase D0856_15050 PF00583 Acetyltransferase (GNAT) family D0856_15050 PF09500 Putative thioesterase (yiiD_Cterm) D0856_15055 PF02580 D-Tyr-tRNA(Tyr) deacylase D0856_15060 PF03631 Virulence factor BrkB D0856_15085 PF03951 Glutamine synthetase, beta-Grasp domain D0856_15085 PF00120 Glutamine synthetase, catalytic domain D0856_15095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_15095 PF00512 His Kinase A (phospho-acceptor) domain D0856_15095 PF00989 PAS fold D0856_15100 PF00072 Response regulator receiver domain D0856_15100 PF02954 Bacterial regulatory protein, Fis family D0856_15100 PF00158 Sigma-54 interaction domain D0856_15105 PF03707 Bacterial signalling protein N terminal repeat D0856_15105 PF00563 EAL domain D0856_15105 PF00990 Diguanylate cyclase, GGDEF domain D0856_15110 PF00962 Adenosine/AMP deaminase D0856_15115 PF06969 HemN C-terminal domain D0856_15115 PF04055 Radical SAM superfamily D0856_15120 PF10675 Protein of unknown function (DUF2489) D0856_15125 PF04220 Der GTPase activator (YihI) D0856_15140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0856_15145 PF01926 50S ribosome-binding GTPase D0856_15155 PF01612 3'-5' exonuclease D0856_15155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0856_15155 PF00476 DNA polymerase family A D0856_15155 PF01367 5'-3' exonuclease, C-terminal SAM fold D0856_15170 PF00490 Delta-aminolevulinic acid dehydratase D0856_15175 PF01026 TatD related DNase D0856_15180 PF00902 Sec-independent protein translocase protein (TatC) D0856_15185 PF02416 mttA/Hcf106 family D0856_15190 PF02416 mttA/Hcf106 family D0856_15195 PF03109 ABC1 family D0856_15200 PF02036 SCP-2 sterol transfer family D0856_15205 PF01209 ubiE/COQ5 methyltransferase family D0856_15210 PF02646 RmuC family D0856_15220 PF03707 Bacterial signalling protein N terminal repeat D0856_15220 PF00990 Diguanylate cyclase, GGDEF domain D0856_15220 PF00563 EAL domain D0856_15225 PF00474 Sodium:solute symporter family D0856_15235 PF10625 Universal stress protein B (UspB) D0856_15240 PF00210 Ferritin-like domain D0856_15245 PF00582 Universal stress protein family D0856_15250 PF00892 EamA-like transporter family D0856_15260 PF04445 Putative SAM-dependent methyltransferase D0856_15265 PF08448 PAS fold D0856_15265 PF00990 Diguanylate cyclase, GGDEF domain D0856_15265 PF00563 EAL domain D0856_15270 PF01037 Lrp/AsnC ligand binding domain D0856_15275 PF01432 Peptidase family M3 D0856_15285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0856_15300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_15300 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_15305 PF01081 KDPG and KHG aldolase D0856_15310 PF02447 GntP family permease D0856_15315 PF01202 Shikimate kinase D0856_15320 PF00920 Dehydratase family D0856_15325 PF00893 Small Multidrug Resistance protein D0856_15330 PF00893 Small Multidrug Resistance protein D0856_15335 PF03466 LysR substrate binding domain D0856_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_15340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0856_15340 PF00356 Bacterial regulatory proteins, lacI family D0856_15345 PF00069 Protein kinase domain D0856_15375 PF12911 N-terminal TM domain of oligopeptide transport permease C D0856_15375 PF00528 Binding-protein-dependent transport system inner membrane component D0856_15385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_15390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_15390 PF00005 ABC transporter D0856_15430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0856_15435 PF13361 UvrD-like helicase C-terminal domain D0856_15435 PF00580 UvrD/REP helicase N-terminal domain D0856_15440 PF08359 YsiA-like protein, C-terminal region D0856_15440 PF00440 Bacterial regulatory proteins, tetR family D0856_15445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_15450 PF00873 AcrB/AcrD/AcrF family D0856_15460 PF04380 Membrane fusogenic activity D0856_15465 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0856_15465 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0856_15470 PF03466 LysR substrate binding domain D0856_15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_15520 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_15525 PF07369 Protein of unknown function (DUF1488) D0856_15530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0856_15530 PF01488 Shikimate / quinate 5-dehydrogenase D0856_15530 PF08501 Shikimate dehydrogenase substrate binding domain D0856_15535 PF01218 Coproporphyrinogen III oxidase D0856_15540 PF01300 Telomere recombination D0856_15545 PF00731 AIR carboxylase D0856_15550 PF02222 ATP-grasp domain D0856_15550 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0856_15555 PF01396 Topoisomerase DNA binding C4 zinc finger D0856_15560 PF04361 Protein of unknown function (DUF494) D0856_15565 PF02481 DNA recombination-mediator protein A D0856_15565 PF17782 DprA winged helix domain D0856_15575 PF01327 Polypeptide deformylase D0856_15580 PF00551 Formyl transferase D0856_15580 PF02911 Formyl transferase, C-terminal domain D0856_15585 PF01029 NusB family D0856_15585 PF01189 16S rRNA methyltransferase RsmB/F D0856_15590 PF02080 TrkA-C domain D0856_15590 PF02254 TrkA-N domain D0856_15605 PF03006 Haemolysin-III related D0856_15610 PF07070 SpoOM protein D0856_15620 PF06288 Protein of unknown function (DUF1040) D0856_15625 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D0856_15625 PF12801 4Fe-4S binding domain D0856_15625 PF13746 4Fe-4S dicluster domain D0856_15630 PF01636 Phosphotransferase enzyme family D0856_15635 PF01323 DSBA-like thioredoxin domain D0856_15640 PF01553 Acyltransferase D0856_15650 PF01078 Magnesium chelatase, subunit ChlI D0856_15650 PF13335 Magnesium chelatase, subunit ChlI C-terminal D0856_15655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0856_15655 PF00205 Thiamine pyrophosphate enzyme, central domain D0856_15655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0856_15665 PF01063 Amino-transferase class IV D0856_15670 PF00920 Dehydratase family D0856_15675 PF00291 Pyridoxal-phosphate dependent enzyme D0856_15675 PF00585 C-terminal regulatory domain of Threonine dehydratase D0856_15680 PF00990 Diguanylate cyclase, GGDEF domain D0856_15685 PF03466 LysR substrate binding domain D0856_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_15690 PF07690 Major Facilitator Superfamily D0856_15695 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_15700 PF00528 Binding-protein-dependent transport system inner membrane component D0856_15705 PF12804 MobA-like NTP transferase domain D0856_15705 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_15710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0856_15710 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0856_15715 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0856_15715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_15720 PF00231 ATP synthase D0856_15725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_15725 PF00306 ATP synthase alpha/beta chain, C terminal domain D0856_15725 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0856_15730 PF00213 ATP synthase delta (OSCP) subunit D0856_15735 PF00430 ATP synthase B/B' CF(0) D0856_15740 PF00137 ATP synthase subunit C D0856_15745 PF00119 ATP synthase A chain D0856_15750 PF03899 ATP synthase I chain D0856_15755 PF17762 HTH domain found in ParB protein D0856_15755 PF02195 ParB-like nuclease domain D0856_15760 PF13614 AAA domain D0856_15765 PF02527 rRNA small subunit methyltransferase G D0856_15770 PF13932 GidA associated domain D0856_15770 PF01134 Glucose inhibited division protein A D0856_15775 PF00258 Flavodoxin D0856_15780 PF01926 50S ribosome-binding GTPase D0856_15780 PF12631 MnmE helical domain D0856_15780 PF10396 GTP-binding protein TrmE N-terminus D0856_15785 PF02096 60Kd inner membrane protein D0856_15785 PF14849 YidC periplasmic domain D0856_15795 PF00825 Ribonuclease P D0856_15800 PF00468 Ribosomal protein L34 D0856_15805 PF00005 ABC transporter D0856_15810 PF00528 Binding-protein-dependent transport system inner membrane component D0856_15815 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_15825 PF11638 DnaA N-terminal domain D0856_15825 PF08299 Bacterial dnaA protein helix-turn-helix D0856_15825 PF00308 Bacterial dnaA protein D0856_15830 PF02768 DNA polymerase III beta subunit, C-terminal domain D0856_15830 PF00712 DNA polymerase III beta subunit, N-terminal domain D0856_15830 PF02767 DNA polymerase III beta subunit, central domain D0856_15835 PF02463 RecF/RecN/SMC N terminal domain D0856_15840 PF18053 DNA gyrase B subunit insert domain D0856_15840 PF01751 Toprim domain D0856_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_15840 PF00204 DNA gyrase B D0856_15840 PF00986 DNA gyrase B subunit, carboxyl terminus D0856_15845 PF00011 Hsp20/alpha crystallin family D0856_15850 PF00155 Aminotransferase class I and II D0856_15855 PF00128 Alpha amylase, catalytic domain D0856_15860 PF05746 DALR anticodon binding domain D0856_15860 PF02092 Glycyl-tRNA synthetase beta subunit D0856_15865 PF02091 Glycyl-tRNA synthetase alpha subunit D0856_15870 PF01169 Uncharacterized protein family UPF0016 D0856_15880 PF01206 Sulfurtransferase TusA D0856_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_15890 PF03466 LysR substrate binding domain D0856_15895 PF00107 Zinc-binding dehydrogenase D0856_15895 PF08240 Alcohol dehydrogenase GroES-like domain D0856_15900 PF02803 Thiolase, C-terminal domain D0856_15900 PF00108 Thiolase, N-terminal domain D0856_15905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0856_15905 PF00378 Enoyl-CoA hydratase/isomerase D0856_15905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0856_15910 PF01205 Uncharacterized protein family UPF0029 D0856_15910 PF09186 Domain of unknown function (DUF1949) D0856_15915 PF02386 Cation transport protein D0856_15920 PF12724 Flavodoxin domain D0856_15965 PF07731 Multicopper oxidase D0856_15965 PF07732 Multicopper oxidase D0856_15965 PF00394 Multicopper oxidase D0856_15970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0856_15975 PF13667 ThiC-associated domain D0856_15975 PF01964 Radical SAM ThiC family D0856_15980 PF02581 Thiamine monophosphate synthase D0856_15985 PF00899 ThiF family D0856_15990 PF02597 ThiS family D0856_15995 PF05690 Thiazole biosynthesis protein ThiG D0856_16000 PF06968 Biotin and Thiamin Synthesis associated domain D0856_16000 PF04055 Radical SAM superfamily D0856_16005 PF00557 Metallopeptidase family M24 D0856_16005 PF01321 Creatinase/Prolidase N-terminal domain D0856_16005 PF01321 Creatinase/Prolidase N-terminal domain D0856_16005 PF00557 Metallopeptidase family M24 D0856_16010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_16010 PF03466 LysR substrate binding domain D0856_16015 PF07690 Major Facilitator Superfamily D0856_16035 PF05114 Protein of unknown function (DUF692) D0856_16045 PF00580 UvrD/REP helicase N-terminal domain D0856_16045 PF13361 UvrD-like helicase C-terminal domain D0856_16060 PF01810 LysE type translocator D0856_16070 PF00892 EamA-like transporter family D0856_16075 PF16124 RecQ zinc-binding D0856_16075 PF00570 HRDC domain D0856_16075 PF00270 DEAD/DEAH box helicase D0856_16075 PF09382 RQC domain D0856_16075 PF00271 Helicase conserved C-terminal domain D0856_16090 PF02592 Putative vitamin uptake transporter D0856_16100 PF02541 Ppx/GppA phosphatase family D0856_16105 PF00270 DEAD/DEAH box helicase D0856_16105 PF00271 Helicase conserved C-terminal domain D0856_16110 PF00085 Thioredoxin D0856_16115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_16115 PF07498 Rho termination factor, N-terminal domain D0856_16115 PF07497 Rho termination factor, RNA-binding domain D0856_16125 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0856_16130 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_16135 PF00175 Oxidoreductase NAD-binding domain D0856_16180 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0856_16185 PF02602 Uroporphyrinogen-III synthase HemD D0856_16190 PF03900 Porphobilinogen deaminase, C-terminal domain D0856_16190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0856_16195 PF01295 Adenylate cyclase, class-I D0856_16195 PF12633 Adenylate cyclase NT domain D0856_16200 PF01491 Frataxin-like domain D0856_16210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0856_16210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0856_16215 PF01678 Diaminopimelate epimerase D0856_16225 PF02899 Phage integrase, N-terminal SAM-like domain D0856_16225 PF00589 Phage integrase family D0856_16230 PF13419 Haloacid dehalogenase-like hydrolase D0856_16235 PF00563 EAL domain D0856_16235 PF10442 FIST C domain D0856_16235 PF00990 Diguanylate cyclase, GGDEF domain D0856_16235 PF08495 FIST N domain D0856_16260 PF12146 Serine aminopeptidase, S33 D0856_16265 PF01810 LysE type translocator D0856_16270 PF08668 HDOD domain D0856_16270 PF00563 EAL domain D0856_16275 PF01022 Bacterial regulatory protein, arsR family D0856_16280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0856_16280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0856_16305 PF10694 Protein of unknown function (DUF2500) D0856_16335 PF01914 MarC family integral membrane protein D0856_16350 PF00448 SRP54-type protein, GTPase domain D0856_16350 PF02881 SRP54-type protein, helical bundle domain D0856_16355 PF00005 ABC transporter D0856_16360 PF18075 FtsX extracellular domain D0856_16365 PF04545 Sigma-70, region 4 D0856_16365 PF04542 Sigma-70 region 2 D0856_16365 PF00140 Sigma-70 factor, region 1.2 D0856_16370 PF00581 Rhodanese-like domain D0856_16375 PF01694 Rhomboid family D0856_16375 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0856_16380 PF03748 Flagellar basal body-associated protein FliL D0856_16385 PF04345 Chorismate lyase D0856_16390 PF01040 UbiA prenyltransferase family D0856_16395 PF01553 Acyltransferase D0856_16405 PF00717 Peptidase S24-like D0856_16405 PF01726 LexA DNA binding domain D0856_16415 PF01554 MatE D0856_16420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_16420 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_16425 PF00440 Bacterial regulatory proteins, tetR family D0856_16435 PF05958 tRNA (Uracil-5-)-methyltransferase D0856_16440 PF07715 TonB-dependent Receptor Plug Domain D0856_16440 PF00593 TonB dependent receptor D0856_16450 PF01177 Asp/Glu/Hydantoin racemase D0856_16520 PF13091 PLD-like domain D0856_16535 PF02237 Biotin protein ligase C terminal domain D0856_16535 PF08279 HTH domain D0856_16535 PF03099 Biotin/lipoate A/B protein ligase family D0856_16540 PF00485 Phosphoribulokinase / Uridine kinase family D0856_16565 PF00009 Elongation factor Tu GTP binding domain D0856_16565 PF03143 Elongation factor Tu C-terminal domain D0856_16565 PF03144 Elongation factor Tu domain 2 D0856_16575 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0856_16580 PF02357 Transcription termination factor nusG D0856_16580 PF00467 KOW motif D0856_16585 PF00298 Ribosomal protein L11, RNA binding domain D0856_16585 PF03946 Ribosomal protein L11, N-terminal domain D0856_16590 PF00687 Ribosomal protein L1p/L10e family D0856_16595 PF00466 Ribosomal protein L10 D0856_16600 PF16320 Ribosomal protein L7/L12 dimerisation domain D0856_16600 PF00542 Ribosomal protein L7/L12 C-terminal domain D0856_16605 PF04561 RNA polymerase Rpb2, domain 2 D0856_16605 PF04563 RNA polymerase beta subunit D0856_16605 PF04565 RNA polymerase Rpb2, domain 3 D0856_16605 PF10385 RNA polymerase beta subunit external 1 domain D0856_16605 PF00562 RNA polymerase Rpb2, domain 6 D0856_16605 PF04560 RNA polymerase Rpb2, domain 7 D0856_16610 PF04983 RNA polymerase Rpb1, domain 3 D0856_16610 PF00623 RNA polymerase Rpb1, domain 2 D0856_16610 PF04997 RNA polymerase Rpb1, domain 1 D0856_16610 PF04998 RNA polymerase Rpb1, domain 5 D0856_16610 PF05000 RNA polymerase Rpb1, domain 4 D0856_16620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0856_16625 PF00293 NUDIX domain D0856_16625 PF09297 NADH pyrophosphatase zinc ribbon domain D0856_16630 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0856_16635 PF03167 Uracil DNA glycosylase superfamily D0856_16640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0856_16645 PF04222 Protein of unknown function (DUF416) D0856_16650 PF01595 Cyclin M transmembrane N-terminal domain D0856_16650 PF00571 CBS domain D0856_16655 PF00216 Bacterial DNA-binding protein D0856_16665 PF02844 Phosphoribosylglycinamide synthetase, N domain D0856_16665 PF02843 Phosphoribosylglycinamide synthetase, C domain D0856_16665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0856_16670 PF02142 MGS-like domain D0856_16670 PF01808 AICARFT/IMPCHase bienzyme D0856_16675 PF13411 MerR HTH family regulatory protein D0856_16680 PF00486 Transcriptional regulatory protein, C terminal D0856_16680 PF18500 CadC C-terminal domain 1 D0856_16690 PF13520 Amino acid permease D0856_16695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0856_16695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0856_16695 PF01276 Orn/Lys/Arg decarboxylase, major domain D0856_16740 PF00990 Diguanylate cyclase, GGDEF domain D0856_16740 PF03707 Bacterial signalling protein N terminal repeat D0856_16740 PF13188 PAS domain D0856_16740 PF00563 EAL domain D0856_16745 PF02954 Bacterial regulatory protein, Fis family D0856_16750 PF01207 Dihydrouridine synthase (Dus) D0856_16765 PF02785 Biotin carboxylase C-terminal domain D0856_16765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0856_16765 PF00289 Biotin carboxylase, N-terminal domain D0856_16770 PF00364 Biotin-requiring enzyme D0856_16775 PF01220 Dehydroquinase class II D0856_16780 PF13193 AMP-binding enzyme C-terminal domain D0856_16780 PF00501 AMP-binding enzyme D0856_16780 PF16177 Acetyl-coenzyme A synthetase N-terminus D0856_16795 PF12832 MFS_1 like family D0856_16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_16800 PF00072 Response regulator receiver domain D0856_16800 PF01627 Hpt domain D0856_16800 PF00672 HAMP domain D0856_16800 PF00512 His Kinase A (phospho-acceptor) domain D0856_16805 PF00206 Lyase D0856_16805 PF10415 Fumarase C C-terminus D0856_16820 PF00474 Sodium:solute symporter family D0856_16830 PF01914 MarC family integral membrane protein D0856_16835 PF00072 Response regulator receiver domain D0856_16835 PF00196 Bacterial regulatory proteins, luxR family D0856_16840 PF02683 Cytochrome C biogenesis protein transmembrane region D0856_16840 PF11412 Disulphide bond corrector protein DsbC D0856_16845 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0856_16850 PF10415 Fumarase C C-terminus D0856_16850 PF00206 Lyase D0856_16855 PF04186 FxsA cytoplasmic membrane protein D0856_16860 PF00588 SpoU rRNA Methylase family D0856_16865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0856_16865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0856_16870 PF00672 HAMP domain D0856_16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_16870 PF16527 Two-component sensor protein CpxA, periplasmic domain D0856_16870 PF00512 His Kinase A (phospho-acceptor) domain D0856_16875 PF00072 Response regulator receiver domain D0856_16875 PF00486 Transcriptional regulatory protein, C terminal D0856_16880 PF07813 LTXXQ motif family protein D0856_16885 PF01545 Cation efflux family D0856_16885 PF16916 Dimerisation domain of Zinc Transporter D0856_16890 PF00365 Phosphofructokinase D0856_16895 PF01554 MatE D0856_16900 PF00166 Chaperonin 10 Kd subunit D0856_16905 PF00118 TCP-1/cpn60 chaperonin family D0856_16915 PF02308 MgtC family D0856_16920 PF04055 Radical SAM superfamily D0856_16925 PF09285 Elongation factor P, C-terminal D0856_16925 PF01132 Elongation factor P (EF-P) OB domain D0856_16925 PF08207 Elongation factor P (EF-P) KOW-like domain D0856_16940 PF02313 Fumarate reductase subunit D D0856_16945 PF02300 Fumarate reductase subunit C D0856_16950 PF13183 4Fe-4S dicluster domain D0856_16950 PF13085 2Fe-2S iron-sulfur cluster binding domain D0856_16955 PF02910 Fumarate reductase flavoprotein C-term D0856_16955 PF00890 FAD binding domain D0856_16960 PF00152 tRNA synthetases class II (D, K and N) D0856_16970 PF00440 Bacterial regulatory proteins, tetR family D0856_16970 PF08360 QacR-like protein, C-terminal region D0856_16980 PF01551 Peptidase family M23 D0856_16985 PF06426 Serine acetyltransferase, N-terminal D0856_16985 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_16990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0856_16990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0856_16995 PF02556 Preprotein translocase subunit SecB D0856_17000 PF00581 Rhodanese-like domain D0856_17005 PF01676 Metalloenzyme superfamily D0856_17005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0856_17015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_17015 PF00672 HAMP domain D0856_17015 PF02743 Cache domain D0856_17020 PF00939 Sodium:sulfate symporter transmembrane region D0856_17030 PF02666 Phosphatidylserine decarboxylase D0856_17035 PF03193 RsgA GTPase D0856_17040 PF00929 Exonuclease D0856_17115 PF08331 Domain of unknown function (DUF1730) D0856_17120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0856_17125 PF01520 N-acetylmuramoyl-L-alanine amidase D0856_17130 PF08676 MutL C terminal dimerisation domain D0856_17130 PF01119 DNA mismatch repair protein, C-terminal domain D0856_17140 PF17209 Hfq protein D0856_17145 PF01926 50S ribosome-binding GTPase D0856_17145 PF13167 GTP-binding GTPase N-terminal D0856_17145 PF16360 GTP-binding GTPase Middle Region D0856_17150 PF01145 SPFH domain / Band 7 family D0856_17150 PF12221 Bacterial membrane protein N terminal D0856_17155 PF01145 SPFH domain / Band 7 family D0856_17160 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0856_17165 PF00709 Adenylosuccinate synthetase D0856_17175 PF08238 Sel1 repeat D0856_17180 PF00970 Oxidoreductase FAD-binding domain D0856_17180 PF00042 Globin D0856_17180 PF00175 Oxidoreductase NAD-binding domain D0856_17185 PF02082 Transcriptional regulator D0856_17190 PF08206 Ribonuclease B OB domain D0856_17190 PF00773 RNB domain D0856_17190 PF00575 S1 RNA binding domain D0856_17190 PF08461 Ribonuclease R winged-helix domain D0856_17190 PF17876 Cold shock domain D0856_17195 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0856_17195 PF00588 SpoU rRNA Methylase family D0856_17200 PF13419 Haloacid dehalogenase-like hydrolase D0856_17205 PF00579 tRNA synthetases class I (W and Y) D0856_17220 PF00117 Glutamine amidotransferase class-I D0856_17225 PF00202 Aminotransferase class-III D0856_17230 PF04958 Arginine N-succinyltransferase beta subunit D0856_17235 PF00171 Aldehyde dehydrogenase family D0856_17245 PF13545 Crp-like helix-turn-helix domain D0856_17245 PF00027 Cyclic nucleotide-binding domain D0856_17250 PF00485 Phosphoribulokinase / Uridine kinase family D0856_17255 PF06794 Uncharacterised protein family (UPF0270) D0856_17260 PF00561 alpha/beta hydrolase fold D0856_17270 PF00005 ABC transporter D0856_17270 PF12848 ABC transporter D0856_17280 PF02525 Flavodoxin-like fold D0856_17285 PF02254 TrkA-N domain D0856_17285 PF00999 Sodium/hydrogen exchanger family D0856_17295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_17305 PF01112 Asparaginase D0856_17310 PF04102 SlyX D0856_17320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0856_17320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_17325 PF08348 YheO-like PAS domain D0856_17325 PF13309 HTH domain D0856_17330 PF02635 DsrE/DsrF-like family D0856_17335 PF02635 DsrE/DsrF-like family D0856_17340 PF04077 DsrH like protein D0856_17345 PF00164 Ribosomal protein S12/S23 D0856_17350 PF00177 Ribosomal protein S7p/S5e D0856_17355 PF00679 Elongation factor G C-terminus D0856_17355 PF14492 Elongation Factor G, domain II D0856_17355 PF03764 Elongation factor G, domain IV D0856_17355 PF00009 Elongation factor Tu GTP binding domain D0856_17355 PF03144 Elongation factor Tu domain 2 D0856_17360 PF00009 Elongation factor Tu GTP binding domain D0856_17360 PF03144 Elongation factor Tu domain 2 D0856_17360 PF03143 Elongation factor Tu C-terminal domain D0856_17365 PF04324 BFD-like [2Fe-2S] binding domain D0856_17370 PF00210 Ferritin-like domain D0856_17375 PF03949 Malic enzyme, NAD binding domain D0856_17375 PF00390 Malic enzyme, N-terminal domain D0856_17380 PF01340 Met Apo-repressor, MetJ D0856_17385 PF01053 Cys/Met metabolism PLP-dependent enzyme D0856_17390 PF03447 Homoserine dehydrogenase, NAD binding domain D0856_17390 PF00742 Homoserine dehydrogenase D0856_17390 PF00696 Amino acid kinase family D0856_17395 PF02219 Methylenetetrahydrofolate reductase D0856_17405 PF00311 Phosphoenolpyruvate carboxylase D0856_17410 PF07687 Peptidase dimerisation domain D0856_17410 PF01546 Peptidase family M20/M25/M40 D0856_17415 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0856_17415 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0856_17420 PF00696 Amino acid kinase family D0856_17425 PF00764 Arginosuccinate synthase D0856_17430 PF14698 Argininosuccinate lyase C-terminal D0856_17430 PF00206 Lyase D0856_17430 PF00583 Acetyltransferase (GNAT) family D0856_17445 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_17445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_17450 PF08534 Redoxin D0856_17450 PF00462 Glutaredoxin D0856_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_17455 PF03466 LysR substrate binding domain D0856_17460 PF00905 Penicillin binding protein transpeptidase domain D0856_17460 PF00912 Transglycosylase D0856_17460 PF17092 Penicillin-binding protein OB-like domain D0856_17485 PF11741 AMIN domain D0856_17485 PF07660 Secretin and TonB N terminus short domain D0856_17485 PF00263 Bacterial type II and III secretion system protein D0856_17485 PF03958 Bacterial type II/III secretion system short domain D0856_17490 PF01202 Shikimate kinase D0856_17495 PF01761 3-dehydroquinate synthase D0856_17505 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0856_17510 PF01555 DNA methylase D0856_17515 PF00834 Ribulose-phosphate 3 epimerase family D0856_17520 PF01250 Ribosomal protein S6 D0856_17525 PF00436 Single-strand binding protein family D0856_17530 PF01084 Ribosomal protein S18 D0856_17535 PF01281 Ribosomal protein L9, N-terminal domain D0856_17535 PF03948 Ribosomal protein L9, C-terminal domain D0856_17545 PF03796 DnaB-like helicase C terminal domain D0856_17545 PF00772 DnaB-like helicase N terminal domain D0856_17550 PF01168 Alanine racemase, N-terminal domain D0856_17550 PF00842 Alanine racemase, C-terminal domain D0856_17560 PF01894 Uncharacterised protein family UPF0047 D0856_17565 PF00342 Phosphoglucose isomerase D0856_17575 PF01475 Ferric uptake regulator family D0856_17580 PF01207 Dihydrouridine synthase (Dus) D0856_17600 PF00175 Oxidoreductase NAD-binding domain D0856_17600 PF00667 FAD binding domain D0856_17600 PF00258 Flavodoxin D0856_17605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0856_17605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0856_17610 PF01507 Phosphoadenosine phosphosulfate reductase family D0856_17645 PF00999 Sodium/hydrogen exchanger family D0856_17650 PF02574 Homocysteine S-methyltransferase D0856_17650 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0856_17650 PF02310 B12 binding domain D0856_17650 PF00809 Pterin binding enzyme D0856_17650 PF02607 B12 binding domain D0856_17655 PF00696 Amino acid kinase family D0856_17655 PF01842 ACT domain D0856_17665 PF00266 Aminotransferase class-V D0856_17675 PF00005 ABC transporter D0856_17675 PF17760 UvrA interaction domain D0856_17675 PF17755 UvrA DNA-binding domain D0856_17680 PF00483 Nucleotidyl transferase D0856_17685 PF00196 Bacterial regulatory proteins, luxR family D0856_17690 PF00436 Single-strand binding protein family D0856_17695 PF00990 Diguanylate cyclase, GGDEF domain D0856_17695 PF17157 Gammaproteobacterial periplasmic sensor domain D0856_17695 PF00563 EAL domain D0856_17715 PF00263 Bacterial type II and III secretion system protein D0856_17715 PF03958 Bacterial type II/III secretion system short domain D0856_17720 PF13401 AAA domain D0856_17720 PF01471 Putative peptidoglycan binding domain D0856_17730 PF00437 Type II/IV secretion system protein D0856_17730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0856_17735 PF00482 Type II secretion system (T2SS), protein F D0856_17745 PF07963 Prokaryotic N-terminal methylation motif D0856_17745 PF00114 Pilin (bacterial filament) D0856_17785 PF04085 rod shape-determining protein MreC D0856_17790 PF04093 rod shape-determining protein MreD D0856_17795 PF02545 Maf-like protein D0856_17800 PF10150 Ribonuclease E/G family D0856_17800 PF00575 S1 RNA binding domain D0856_17805 PF13116 Protein of unknown function D0856_17805 PF13502 AsmA-like C-terminal region D0856_17815 PF01523 Putative modulator of DNA gyrase D0856_17820 PF13638 PIN domain D0856_17820 PF02562 PhoH-like protein D0856_17825 PF18339 RapA N-terminal Tudor like domain 1 D0856_17825 PF00176 SNF2 family N-terminal domain D0856_17825 PF12137 RNA polymerase recycling family C-terminal D0856_17825 PF18337 RapA N-terminal Tudor like domain D0856_17825 PF00271 Helicase conserved C-terminal domain D0856_17835 PF00849 RNA pseudouridylate synthase D0856_17840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0856_17840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0856_17845 PF04751 Protein of unknown function (DUF615) D0856_17850 PF01523 Putative modulator of DNA gyrase D0856_17855 PF00571 CBS domain D0856_17855 PF01769 Divalent cation transporter D0856_17855 PF03448 MgtE intracellular N domain D0856_17860 PF00381 PTS HPr component phosphorylation site D0856_17865 PF03668 P-loop ATPase protein family D0856_17870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_17875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0856_17880 PF04552 Sigma-54, DNA binding domain D0856_17880 PF04963 Sigma-54 factor, core binding domain D0856_17880 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0856_17885 PF00005 ABC transporter D0856_17885 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0856_17890 PF03968 OstA-like protein D0856_17900 PF00571 CBS domain D0856_17900 PF01380 SIS domain D0856_17905 PF01699 Sodium/calcium exchanger protein D0856_17910 PF00005 ABC transporter D0856_17915 PF02405 Permease MlaE D0856_17920 PF02470 MlaD protein D0856_17925 PF05494 MlaC protein D0856_17935 PF01722 BolA-like protein D0856_17940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0856_17945 PF01553 Acyltransferase D0856_17950 PF01042 Endoribonuclease L-PSP D0856_17955 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0856_17955 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0856_17970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0856_17970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0856_17980 PF06877 Regulator of ribonuclease activity B D0856_17990 PF00583 Acetyltransferase (GNAT) family D0856_18000 PF08264 Anticodon-binding domain of tRNA D0856_18000 PF10458 Valyl tRNA synthetase tRNA binding arm D0856_18000 PF00133 tRNA synthetases class I (I, L, M and V) D0856_18005 PF04364 DNA polymerase III chi subunit, HolC D0856_18010 PF00883 Cytosol aminopeptidase family, catalytic domain D0856_18010 PF02789 Cytosol aminopeptidase family, N-terminal domain D0856_18015 PF03739 Lipopolysaccharide export system permease LptF/LptG D0856_18020 PF03739 Lipopolysaccharide export system permease LptF/LptG D0856_18030 PF00106 short chain dehydrogenase D0856_18040 PF01522 Polysaccharide deacetylase D0856_18045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_18050 PF02378 Phosphotransferase system, EIIC D0856_18055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0856_18065 PF04794 YdjC-like protein D0856_18075 PF00072 Response regulator receiver domain D0856_18125 PF00171 Aldehyde dehydrogenase family D0856_18155 PF17200 Single Cache domain 2 D0856_18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_18155 PF00672 HAMP domain D0856_18195 PF01464 Transglycosylase SLT domain D0856_18195 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0856_18200 PF04362 Bacterial Fe(2+) trafficking D0856_18205 PF00730 HhH-GPD superfamily base excision DNA repair protein D0856_18205 PF00633 Helix-hairpin-helix motif D0856_18205 PF14815 NUDIX domain D0856_18210 PF02390 Putative methyltransferase D0856_18215 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0856_18220 PF04960 Glutaminase D0856_18230 PF04055 Radical SAM superfamily D0856_18230 PF06969 HemN C-terminal domain D0856_18235 PF01725 Ham1 family D0856_18245 PF02594 Uncharacterised ACR, YggU family COG1872 D0856_18250 PF02325 YGGT family D0856_18255 PF03807 NADP oxidoreductase coenzyme F420-dependent D0856_18255 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0856_18260 PF01168 Alanine racemase, N-terminal domain D0856_18265 PF00437 Type II/IV secretion system protein D0856_18270 PF00437 Type II/IV secretion system protein D0856_18275 PF03652 Holliday junction resolvase D0856_18280 PF02622 Uncharacterized ACR, COG1678 D0856_18285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0856_18285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0856_18290 PF04452 RNA methyltransferase D0856_18295 PF04231 Endonuclease I D0856_18300 PF17283 SprT-like zinc ribbon domain D0856_18300 PF10263 SprT-like family D0856_18310 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0856_18310 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0856_18310 PF02772 S-adenosylmethionine synthetase, central domain D0856_18315 PF02780 Transketolase, C-terminal domain D0856_18315 PF02779 Transketolase, pyrimidine binding domain D0856_18315 PF00456 Transketolase, thiamine diphosphate binding domain D0856_18325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0856_18325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0856_18330 PF00162 Phosphoglycerate kinase D0856_18335 PF01116 Fructose-bisphosphate aldolase class-II D0856_18340 PF00924 Mechanosensitive ion channel D0856_18340 PF05552 Conserved TM helix D0856_18350 PF01810 LysE type translocator D0856_18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_18355 PF03466 LysR substrate binding domain D0856_18360 PF04402 Protein of unknown function (DUF541) D0856_18365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0856_18365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0856_18365 PF01842 ACT domain D0856_18370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0856_18375 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0856_18385 PF05164 Cell division protein ZapA D0856_18395 PF03695 Uncharacterised protein family (UPF0149) D0856_18400 PF01494 FAD binding domain D0856_18405 PF01494 FAD binding domain D0856_18445 PF02566 OsmC-like protein D0856_18450 PF01047 MarR family D0856_18455 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0856_18455 PF00578 AhpC/TSA family D0856_18460 PF13192 Thioredoxin domain D0856_18460 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_18535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_18545 PF03466 LysR substrate binding domain D0856_18550 PF02056 Family 4 glycosyl hydrolase D0856_18550 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0856_18560 PF01810 LysE type translocator D0856_18565 PF13404 AsnC-type helix-turn-helix domain D0856_18565 PF01037 Lrp/AsnC ligand binding domain D0856_18580 PF03473 MOSC domain D0856_18580 PF03475 3-alpha domain D0856_18585 PF00356 Bacterial regulatory proteins, lacI family D0856_18590 PF03553 Na+/H+ antiporter family D0856_18595 PF00155 Aminotransferase class I and II D0856_18600 PF00271 Helicase conserved C-terminal domain D0856_18600 PF00270 DEAD/DEAH box helicase D0856_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_18615 PF03466 LysR substrate binding domain D0856_18620 PF04542 Sigma-70 region 2 D0856_18620 PF08281 Sigma-70, region 4 D0856_18630 PF00155 Aminotransferase class I and II D0856_18635 PF03786 D-mannonate dehydratase (UxuA) D0856_18640 PF00392 Bacterial regulatory proteins, gntR family D0856_18640 PF07729 FCD domain D0856_18645 PF03480 Bacterial extracellular solute-binding protein, family 7 D0856_18650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0856_18655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0856_18660 PF01232 Mannitol dehydrogenase Rossmann domain D0856_18660 PF08125 Mannitol dehydrogenase C-terminal domain D0856_18665 PF02614 Glucuronate isomerase D0856_18670 PF00294 pfkB family carbohydrate kinase D0856_18675 PF01081 KDPG and KHG aldolase D0856_18680 PF10688 Bacterial inner membrane protein D0856_18685 PF00440 Bacterial regulatory proteins, tetR family D0856_18690 PF00696 Amino acid kinase family D0856_18695 PF13520 Amino acid permease D0856_18700 PF04371 Porphyromonas-type peptidyl-arginine deiminase D0856_18705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0856_18705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0856_18710 PF01042 Endoribonuclease L-PSP D0856_18720 PF00005 ABC transporter D0856_18720 PF00664 ABC transporter transmembrane region D0856_18730 PF01037 Lrp/AsnC ligand binding domain D0856_18745 PF00300 Histidine phosphatase superfamily (branch 1) D0856_18750 PF13302 Acetyltransferase (GNAT) domain D0856_18780 PF14850 DNA-binding domain of Proline dehydrogenase D0856_18780 PF00171 Aldehyde dehydrogenase family D0856_18780 PF01619 Proline dehydrogenase D0856_18780 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0856_18785 PF12833 Helix-turn-helix domain D0856_18795 PF01243 Pyridoxamine 5'-phosphate oxidase D0856_18795 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0856_18800 PF00196 Bacterial regulatory proteins, luxR family D0856_18800 PF03472 Autoinducer binding domain D0856_18805 PF03176 MMPL family D0856_18830 PF00512 His Kinase A (phospho-acceptor) domain D0856_18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_18830 PF02743 Cache domain D0856_18835 PF00072 Response regulator receiver domain D0856_18835 PF02954 Bacterial regulatory protein, Fis family D0856_18835 PF00158 Sigma-54 interaction domain D0856_18855 PF03412 Peptidase C39 family D0856_18855 PF00005 ABC transporter D0856_18855 PF00664 ABC transporter transmembrane region D0856_18865 PF03358 NADPH-dependent FMN reductase D0856_18870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_18875 PF00246 Zinc carboxypeptidase D0856_18880 PF01418 Helix-turn-helix domain, rpiR family D0856_18880 PF01380 SIS domain D0856_18885 PF01380 SIS domain D0856_18890 PF00367 phosphotransferase system, EIIB D0856_18890 PF02378 Phosphotransferase system, EIIC D0856_18895 PF00267 Gram-negative porin D0856_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_18905 PF03466 LysR substrate binding domain D0856_18910 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_18920 PF13718 GNAT acetyltransferase 2 D0856_18920 PF05127 Helicase D0856_18925 PF08775 ParB family D0856_18925 PF02195 ParB-like nuclease domain D0856_18930 PF18607 ParA helix turn helix domain D0856_18930 PF13614 AAA domain D0856_18950 PF00005 ABC transporter D0856_18950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_18955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_18955 PF00005 ABC transporter D0856_18965 PF08719 Domain of unknown function (DUF1768) D0856_18965 PF00925 GTP cyclohydrolase II D0856_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_18975 PF01627 Hpt domain D0856_18975 PF00512 His Kinase A (phospho-acceptor) domain D0856_18975 PF00672 HAMP domain D0856_18975 PF17149 Periplasmic sensor domain found in signal transduction proteins D0856_18975 PF00072 Response regulator receiver domain D0856_18985 PF01709 Transcriptional regulator D0856_18990 PF01098 Cell cycle protein D0856_19005 PF13533 Biotin-lipoyl like D0856_19010 PF03466 LysR substrate binding domain D0856_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19020 PF00005 ABC transporter D0856_19040 PF07694 5TMR of 5TMR-LYT D0856_19040 PF13492 GAF domain D0856_19040 PF06580 Histidine kinase D0856_19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_19045 PF00072 Response regulator receiver domain D0856_19045 PF04397 LytTr DNA-binding domain D0856_19055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0856_19060 PF00672 HAMP domain D0856_19060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_19060 PF17200 Single Cache domain 2 D0856_19075 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_19080 PF03616 Sodium/glutamate symporter D0856_19095 PF00005 ABC transporter D0856_19100 PF00155 Aminotransferase class I and II D0856_19100 PF00392 Bacterial regulatory proteins, gntR family D0856_19105 PF03616 Sodium/glutamate symporter D0856_19115 PF00455 DeoR C terminal sensor domain D0856_19115 PF08220 DeoR-like helix-turn-helix domain D0856_19120 PF03611 PTS system sugar-specific permease component D0856_19125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_19130 PF00596 Class II Aldolase and Adducin N-terminal domain D0856_19140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0856_19145 PF01261 Xylose isomerase-like TIM barrel D0856_19165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0856_19180 PF03466 LysR substrate binding domain D0856_19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19185 PF02678 Pirin D0856_19185 PF17954 Quercetinase C-terminal cupin domain D0856_19190 PF07681 DoxX D0856_19200 PF06029 AlkA N-terminal domain D0856_19200 PF00730 HhH-GPD superfamily base excision DNA repair protein D0856_19205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0856_19205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0856_19215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0856_19225 PF03600 Citrate transporter D0856_19310 PF08329 Chitinase A, N-terminal domain D0856_19310 PF00704 Glycosyl hydrolases family 18 D0856_19320 PF06865 Pyrimidine/purine nucleoside phosphorylase D0856_19330 PF00563 EAL domain D0856_19330 PF00990 Diguanylate cyclase, GGDEF domain D0856_19335 PF02264 LamB porin D0856_19340 PF00356 Bacterial regulatory proteins, lacI family D0856_19355 PF00528 Binding-protein-dependent transport system inner membrane component D0856_19360 PF00232 Glycosyl hydrolase family 1 D0856_19365 PF00005 ABC transporter D0856_19365 PF17912 MalK OB fold domain D0856_19370 PF00356 Bacterial regulatory proteins, lacI family D0856_19375 PF01554 MatE D0856_19380 PF00849 RNA pseudouridylate synthase D0856_19385 PF01809 Putative membrane protein insertion efficiency factor D0856_19415 PF05656 Protein of unknown function (DUF805) D0856_19425 PF00756 Putative esterase D0856_19430 PF00107 Zinc-binding dehydrogenase D0856_19430 PF08240 Alcohol dehydrogenase GroES-like domain D0856_19435 PF00797 N-acetyltransferase D0856_19450 PF03466 LysR substrate binding domain D0856_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19460 PF03466 LysR substrate binding domain D0856_19465 PF08021 Siderophore-interacting FAD-binding domain D0856_19465 PF04954 Siderophore-interacting protein D0856_19470 PF00326 Prolyl oligopeptidase family D0856_19475 PF01810 LysE type translocator D0856_19480 PF01037 Lrp/AsnC ligand binding domain D0856_19485 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0856_19485 PF18416 N-acetylglucosamine binding protein domain 2 D0856_19495 PF00893 Small Multidrug Resistance protein D0856_19510 PF13599 Pentapeptide repeats (9 copies) D0856_19515 PF03922 OmpW family D0856_19520 PF16868 NMT1-like family D0856_19530 PF13533 Biotin-lipoyl like D0856_19535 PF07690 Major Facilitator Superfamily D0856_19545 PF12706 Beta-lactamase superfamily domain D0856_19555 PF01204 Trehalase D0856_19570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19585 PF03466 LysR substrate binding domain D0856_19590 PF03974 Ecotin D0856_19610 PF03466 LysR substrate binding domain D0856_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_19620 PF01773 Na+ dependent nucleoside transporter N-terminus D0856_19620 PF07662 Na+ dependent nucleoside transporter C-terminus D0856_19620 PF07670 Nucleoside recognition D0856_19630 PF13419 Haloacid dehalogenase-like hydrolase D0856_19660 PF01979 Amidohydrolase family D0856_19670 PF17853 GGDEF-like domain D0856_19670 PF05651 Putative sugar diacid recognition D0856_19670 PF13556 PucR C-terminal helix-turn-helix domain D0856_19675 PF02595 Glycerate kinase family D0856_19680 PF00155 Aminotransferase class I and II D0856_19680 PF00392 Bacterial regulatory proteins, gntR family D0856_19725 PF00583 Acetyltransferase (GNAT) family D0856_19755 PF03264 NapC/NirT cytochrome c family, N-terminal region D0856_19760 PF00384 Molybdopterin oxidoreductase D0856_19760 PF01568 Molydopterin dinucleotide binding domain D0856_19760 PF18364 Molybdopterin oxidoreductase N-terminal domain D0856_19765 PF18719 ArlS sensor domain D0856_19765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_19765 PF00512 His Kinase A (phospho-acceptor) domain D0856_19775 PF01569 PAP2 superfamily D0856_19780 PF02581 Thiamine monophosphate synthase D0856_19785 PF02110 Hydroxyethylthiazole kinase family D0856_19790 PF03070 TENA/THI-4/PQQC family D0856_19795 PF09084 NMT1/THI5 like D0856_19800 PF00528 Binding-protein-dependent transport system inner membrane component D0856_19805 PF00005 ABC transporter D0856_19810 PF08543 Phosphomethylpyrimidine kinase D0856_19815 PF01523 Putative modulator of DNA gyrase D0856_19820 PF01523 Putative modulator of DNA gyrase D0856_19825 PF04013 Putative SAM-dependent RNA methyltransferase D0856_19880 PF10928 Protein of unknown function (DUF2810) D0856_19885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0856_19885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0856_19895 PF03009 Glycerophosphoryl diester phosphodiesterase family D0856_19905 PF00072 Response regulator receiver domain D0856_19905 PF00486 Transcriptional regulatory protein, C terminal D0856_19910 PF16750 Sensor domain of 2-component histidine kinase D0856_19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_19910 PF00512 His Kinase A (phospho-acceptor) domain D0856_19910 PF00672 HAMP domain D0856_19915 PF00593 TonB dependent receptor D0856_19915 PF07715 TonB-dependent Receptor Plug Domain D0856_19925 PF01618 MotA/TolQ/ExbB proton channel family D0856_19930 PF01618 MotA/TolQ/ExbB proton channel family D0856_19935 PF02472 Biopolymer transport protein ExbD/TolR D0856_19980 PF01297 Zinc-uptake complex component A periplasmic D0856_19985 PF00005 ABC transporter D0856_19990 PF00950 ABC 3 transport family D0856_20005 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0856_20005 PF00326 Prolyl oligopeptidase family D0856_20010 PF07690 Major Facilitator Superfamily D0856_20015 PF00491 Arginase family D0856_20020 PF17810 Arginine decarboxylase helical bundle domain D0856_20020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0856_20020 PF17944 Arginine decarboxylase C-terminal helical extension D0856_20025 PF00753 Metallo-beta-lactamase superfamily D0856_20030 PF18030 RimK PreATP-grasp domain D0856_20030 PF08443 RimK-like ATP-grasp domain D0856_20035 PF18030 RimK PreATP-grasp domain D0856_20035 PF08443 RimK-like ATP-grasp domain D0856_20050 PF12706 Beta-lactamase superfamily domain D0856_20060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20060 PF03466 LysR substrate binding domain D0856_20085 PF00232 Glycosyl hydrolase family 1 D0856_20090 PF00512 His Kinase A (phospho-acceptor) domain D0856_20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_20095 PF02954 Bacterial regulatory protein, Fis family D0856_20095 PF00072 Response regulator receiver domain D0856_20095 PF00158 Sigma-54 interaction domain D0856_20100 PF05525 Branched-chain amino acid transport protein D0856_20120 PF01266 FAD dependent oxidoreductase D0856_20130 PF03116 NQR2, RnfD, RnfE family D0856_20135 PF01212 Beta-eliminating lyase D0856_20155 PF07670 Nucleoside recognition D0856_20155 PF01773 Na+ dependent nucleoside transporter N-terminus D0856_20155 PF07662 Na+ dependent nucleoside transporter C-terminus D0856_20160 PF00483 Nucleotidyl transferase D0856_20195 PF00990 Diguanylate cyclase, GGDEF domain D0856_20200 PF00875 DNA photolyase D0856_20200 PF03441 FAD binding domain of DNA photolyase D0856_20205 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D0856_20220 PF01641 SelR domain D0856_20220 PF01625 Peptide methionine sulfoxide reductase D0856_20225 PF02566 OsmC-like protein D0856_20230 PF14602 Hexapeptide repeat of succinyl-transferase D0856_20230 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D0856_20230 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_20260 PF00005 ABC transporter D0856_20260 PF08402 TOBE domain D0856_20275 PF00289 Biotin carboxylase, N-terminal domain D0856_20275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0856_20275 PF02785 Biotin carboxylase C-terminal domain D0856_20285 PF03466 LysR substrate binding domain D0856_20285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20290 PF13419 Haloacid dehalogenase-like hydrolase D0856_20325 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0856_20325 PF12795 Mechanosensitive ion channel porin domain D0856_20325 PF00924 Mechanosensitive ion channel D0856_20330 PF00834 Ribulose-phosphate 3 epimerase family D0856_20335 PF02502 Ribose/Galactose Isomerase D0856_20340 PF00367 phosphotransferase system, EIIB D0856_20340 PF02378 Phosphotransferase system, EIIC D0856_20345 PF08244 Glycosyl hydrolases family 32 C terminal D0856_20345 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0856_20350 PF01380 SIS domain D0856_20350 PF01418 Helix-turn-helix domain, rpiR family D0856_20355 PF00657 GDSL-like Lipase/Acylhydrolase D0856_20370 PF03611 PTS system sugar-specific permease component D0856_20380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_20385 PF00356 Bacterial regulatory proteins, lacI family D0856_20390 PF13419 Haloacid dehalogenase-like hydrolase D0856_20400 PF00266 Aminotransferase class-V D0856_20415 PF00005 ABC transporter D0856_20420 PF00528 Binding-protein-dependent transport system inner membrane component D0856_20425 PF00392 Bacterial regulatory proteins, gntR family D0856_20425 PF07702 UTRA domain D0856_20440 PF04393 Protein of unknown function (DUF535) D0856_20450 PF01266 FAD dependent oxidoreductase D0856_20455 PF18027 Cytosolic carboxypeptidase N-terminal domain D0856_20455 PF00246 Zinc carboxypeptidase D0856_20460 PF00691 OmpA family D0856_20460 PF01389 OmpA-like transmembrane domain D0856_20465 PF03466 LysR substrate binding domain D0856_20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20475 PF03466 LysR substrate binding domain D0856_20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20485 PF01566 Natural resistance-associated macrophage protein D0856_20490 PF00854 POT family D0856_20495 PF03313 Serine dehydratase alpha chain D0856_20495 PF03315 Serine dehydratase beta chain D0856_20520 PF01476 LysM domain D0856_20520 PF01464 Transglycosylase SLT domain D0856_20540 PF00460 Flagella basal body rod protein D0856_20545 PF00460 Flagella basal body rod protein D0856_20545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_20550 PF03963 Flagellar hook capping protein - N-terminal region D0856_20550 PF13860 FlgD Ig-like domain D0856_20550 PF13861 FlgD Tudor-like domain D0856_20555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_20555 PF07559 Flagellar basal body protein FlaE D0856_20555 PF00460 Flagella basal body rod protein D0856_20560 PF00460 Flagella basal body rod protein D0856_20560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_20565 PF00460 Flagella basal body rod protein D0856_20565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_20570 PF02107 Flagellar L-ring protein D0856_20575 PF02119 Flagellar P-ring protein D0856_20580 PF10135 Rod binding protein D0856_20580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0856_20585 PF00460 Flagella basal body rod protein D0856_20585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0856_20590 PF00669 Bacterial flagellin N-terminal helical region D0856_20590 PF00700 Bacterial flagellin C-terminal helical region D0856_20610 PF01070 FMN-dependent dehydrogenase D0856_20615 PF03466 LysR substrate binding domain D0856_20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20635 PF03741 Integral membrane protein TerC family D0856_20635 PF03471 Transporter associated domain D0856_20640 PF00486 Transcriptional regulatory protein, C terminal D0856_20640 PF18500 CadC C-terminal domain 1 D0856_20655 PF08241 Methyltransferase domain D0856_20685 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_20695 PF08000 Bacterial PH domain D0856_20700 PF02567 Phenazine biosynthesis-like protein D0856_20710 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0856_20710 PF00691 OmpA family D0856_20715 PF01618 MotA/TolQ/ExbB proton channel family D0856_20720 PF04545 Sigma-70, region 4 D0856_20720 PF04542 Sigma-70 region 2 D0856_20725 PF03748 Flagellar basal body-associated protein FliL D0856_20740 PF02561 Flagellar protein FliS D0856_20745 PF07196 Flagellin hook IN motif D0856_20745 PF02465 Flagellar hook-associated protein 2 N-terminus D0856_20745 PF07195 Flagellar hook-associated protein 2 C-terminus D0856_20755 PF00700 Bacterial flagellin C-terminal helical region D0856_20755 PF00669 Bacterial flagellin N-terminal helical region D0856_20765 PF00771 FHIPEP family D0856_20770 PF01312 FlhB HrpN YscU SpaS Family D0856_20775 PF01311 Bacterial export proteins, family 1 D0856_20780 PF01313 Bacterial export proteins, family 3 D0856_20785 PF00813 FliP family D0856_20790 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0856_20805 PF02954 Bacterial regulatory protein, Fis family D0856_20805 PF00158 Sigma-54 interaction domain D0856_20805 PF00072 Response regulator receiver domain D0856_20810 PF02049 Flagellar hook-basal body complex protein FliE D0856_20815 PF08345 Flagellar M-ring protein C-terminal D0856_20815 PF01514 Secretory protein of YscJ/FliF family D0856_20820 PF01706 FliG C-terminal domain D0856_20820 PF14842 FliG N-terminal domain D0856_20820 PF14841 FliG middle domain D0856_20830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_20830 PF18269 T3SS EscN ATPase C-terminal domain D0856_20840 PF00563 EAL domain D0856_20840 PF05231 MASE1 D0856_20850 PF03466 LysR substrate binding domain D0856_20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_20860 PF00419 Fimbrial protein D0856_20865 PF02753 Pili assembly chaperone PapD, C-terminal domain D0856_20865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0856_20870 PF13954 PapC N-terminal domain D0856_20870 PF13953 PapC C-terminal domain D0856_20870 PF00577 Outer membrane usher protein D0856_20975 PF07030 Protein of unknown function (DUF1320) D0856_20980 PF12949 HeH/LEM domain D0856_20980 PF17891 Mu-like prophage FluMu N-terminal domain D0856_20985 PF10124 Mu-like prophage major head subunit gpT D0856_20995 PF10123 Mu-like prophage I protein D0856_21000 PF05069 Phage virion morphogenesis family D0856_21015 PF06074 Protein of unknown function (DUF935) D0856_21020 PF03237 Terminase-like family D0856_21030 PF08461 Ribonuclease R winged-helix domain D0856_21055 PF08765 Mor transcription activator family D0856_21075 PF06252 Protein of unknown function (DUF1018) D0856_21130 PF13401 AAA domain D0856_21130 PF09077 Mu B transposition protein, C terminal D0856_21135 PF02316 Mu DNA-binding domain D0856_21135 PF02914 Bacteriophage Mu transposase D0856_21135 PF09039 Mu DNA binding, I gamma subdomain D0856_21135 PF09299 Mu transposase, C-terminal D0856_21145 PF13693 Winged helix-turn-helix DNA-binding D0856_21160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_21165 PF03466 LysR substrate binding domain D0856_21185 PF00486 Transcriptional regulatory protein, C terminal D0856_21185 PF00072 Response regulator receiver domain D0856_21190 PF00072 Response regulator receiver domain D0856_21190 PF00512 His Kinase A (phospho-acceptor) domain D0856_21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_21190 PF08448 PAS fold D0856_21190 PF13426 PAS domain D0856_21195 PF00266 Aminotransferase class-V D0856_21205 PF00990 Diguanylate cyclase, GGDEF domain D0856_21205 PF00563 EAL domain D0856_21205 PF03707 Bacterial signalling protein N terminal repeat D0856_21210 PF00155 Aminotransferase class I and II D0856_21215 PF08240 Alcohol dehydrogenase GroES-like domain D0856_21215 PF00107 Zinc-binding dehydrogenase D0856_21225 PF00194 Eukaryotic-type carbonic anhydrase D0856_21230 PF00924 Mechanosensitive ion channel D0856_21245 PF01070 FMN-dependent dehydrogenase D0856_21250 PF02652 L-lactate permease D0856_21255 PF03466 LysR substrate binding domain D0856_21255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_21260 PF00326 Prolyl oligopeptidase family D0856_21260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0856_21265 PF00005 ABC transporter D0856_21265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0856_21275 PF05362 Lon protease (S16) C-terminal proteolytic domain D0856_21275 PF13654 AAA domain D0856_21280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_21280 PF12729 Four helix bundle sensory module for signal transduction D0856_21280 PF00672 HAMP domain D0856_21285 PF13609 Gram-negative porin D0856_21290 PF07238 PilZ domain D0856_21290 PF12945 Flagellar protein YcgR D0856_21305 PF13302 Acetyltransferase (GNAT) domain D0856_21310 PF12800 4Fe-4S binding domain D0856_21310 PF12838 4Fe-4S dicluster domain D0856_21315 PF12837 4Fe-4S binding domain D0856_21315 PF12801 4Fe-4S binding domain D0856_21330 PF01022 Bacterial regulatory protein, arsR family D0856_21335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0856_21335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0856_21340 PF04074 YhcH/YjgK/YiaL D0856_21355 PF12558 ATP-binding cassette cobalt transporter D0856_21355 PF00005 ABC transporter D0856_21360 PF07155 ECF-type riboflavin transporter, S component D0856_21365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_21365 PF00529 HlyD membrane-fusion protein of T1SS D0856_21370 PF11742 Protein of unknown function (DUF3302) D0856_21380 PF00990 Diguanylate cyclase, GGDEF domain D0856_21395 PF01048 Phosphorylase superfamily D0856_21405 PF08349 Protein of unknown function (DUF1722) D0856_21410 PF13411 MerR HTH family regulatory protein D0856_21415 PF00875 DNA photolyase D0856_21415 PF03441 FAD binding domain of DNA photolyase D0856_21420 PF03734 L,D-transpeptidase catalytic domain D0856_21420 PF01476 LysM domain D0856_21420 PF17969 L,D-transpeptidase C-terminal domain D0856_21430 PF00271 Helicase conserved C-terminal domain D0856_21430 PF00270 DEAD/DEAH box helicase D0856_21435 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0856_21435 PF00326 Prolyl oligopeptidase family D0856_21440 PF00593 TonB dependent receptor D0856_21440 PF07715 TonB-dependent Receptor Plug Domain D0856_21460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_21460 PF00672 HAMP domain D0856_21460 PF02743 Cache domain D0856_21465 PF12849 PBP superfamily domain D0856_21470 PF00528 Binding-protein-dependent transport system inner membrane component D0856_21475 PF00528 Binding-protein-dependent transport system inner membrane component D0856_21480 PF00005 ABC transporter D0856_21500 PF13519 von Willebrand factor type A domain D0856_21510 PF01882 Protein of unknown function DUF58 D0856_21515 PF17863 AAA lid domain D0856_21515 PF07726 ATPase family associated with various cellular activities (AAA) D0856_21535 PF00672 HAMP domain D0856_21535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_21535 PF02743 Cache domain D0856_21545 PF00196 Bacterial regulatory proteins, luxR family D0856_21550 PF00196 Bacterial regulatory proteins, luxR family D0856_21565 PF00529 HlyD membrane-fusion protein of T1SS D0856_21570 PF14602 Hexapeptide repeat of succinyl-transferase D0856_21570 PF12464 Maltose acetyltransferase D0856_21575 PF00072 Response regulator receiver domain D0856_21575 PF02954 Bacterial regulatory protein, Fis family D0856_21575 PF00158 Sigma-54 interaction domain D0856_21580 PF00512 His Kinase A (phospho-acceptor) domain D0856_21580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_21580 PF02743 Cache domain D0856_21600 PF00005 ABC transporter D0856_21620 PF01389 OmpA-like transmembrane domain D0856_21620 PF00691 OmpA family D0856_21640 PF00691 OmpA family D0856_21650 PF03707 Bacterial signalling protein N terminal repeat D0856_21650 PF00990 Diguanylate cyclase, GGDEF domain D0856_21650 PF00563 EAL domain D0856_21655 PF02378 Phosphotransferase system, EIIC D0856_21660 PF00127 Copper binding proteins, plastocyanin/azurin family D0856_21670 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_21675 PF00375 Sodium:dicarboxylate symporter family D0856_21685 PF13419 Haloacid dehalogenase-like hydrolase D0856_21690 PF00158 Sigma-54 interaction domain D0856_21690 PF01590 GAF domain D0856_21695 PF00753 Metallo-beta-lactamase superfamily D0856_21695 PF00301 Rubredoxin D0856_21695 PF00258 Flavodoxin D0856_21700 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_21700 PF18113 Rubredoxin binding C-terminal domain D0856_21715 PF11742 Protein of unknown function (DUF3302) D0856_21720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_21720 PF00529 HlyD membrane-fusion protein of T1SS D0856_21725 PF03466 LysR substrate binding domain D0856_21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_21735 PF01238 Phosphomannose isomerase type I D0856_21740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_21740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_21745 PF12833 Helix-turn-helix domain D0856_21755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_21765 PF03466 LysR substrate binding domain D0856_21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_21775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0856_21775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0856_21780 PF06628 Catalase-related immune-responsive D0856_21780 PF00199 Catalase D0856_21790 PF16884 N-terminal domain of oxidoreductase D0856_21790 PF00107 Zinc-binding dehydrogenase D0856_21795 PF00440 Bacterial regulatory proteins, tetR family D0856_21795 PF16925 Tetracyclin repressor-like, C-terminal domain D0856_21805 PF00144 Beta-lactamase D0856_21835 PF13439 Glycosyltransferase Family 4 D0856_21835 PF00534 Glycosyl transferases group 1 D0856_21845 PF02706 Chain length determinant protein D0856_21845 PF13807 G-rich domain on putative tyrosine kinase D0856_21845 PF13614 AAA domain D0856_21860 PF02397 Bacterial sugar transferase D0856_21865 PF00005 ABC transporter D0856_21865 PF08402 TOBE domain D0856_21875 PF01547 Bacterial extracellular solute-binding protein D0856_21880 PF14785 Maltose transport system permease protein MalF P2 domain D0856_21880 PF00528 Binding-protein-dependent transport system inner membrane component D0856_21885 PF00528 Binding-protein-dependent transport system inner membrane component D0856_21915 PF05661 Protein of unknown function (DUF808) D0856_21920 PF01979 Amidohydrolase family D0856_21925 PF01679 Proteolipid membrane potential modulator D0856_21930 PF03476 MOSC N-terminal beta barrel domain D0856_21930 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_21930 PF03476 MOSC N-terminal beta barrel domain D0856_21930 PF03473 MOSC domain D0856_21930 PF00111 2Fe-2S iron-sulfur cluster binding domain D0856_21930 PF03473 MOSC domain D0856_21935 PF02540 NAD synthase D0856_21940 PF01467 Cytidylyltransferase-like D0856_21980 PF00005 ABC transporter D0856_21985 PF01032 FecCD transport family D0856_21995 PF02472 Biopolymer transport protein ExbD/TolR D0856_22000 PF01618 MotA/TolQ/ExbB proton channel family D0856_22015 PF06228 Haem utilisation ChuX/HutX D0856_22020 PF01243 Pyridoxamine 5'-phosphate oxidase D0856_22035 PF00072 Response regulator receiver domain D0856_22035 PF01584 CheW-like domain D0856_22045 PF00128 Alpha amylase, catalytic domain D0856_22050 PF08240 Alcohol dehydrogenase GroES-like domain D0856_22050 PF00107 Zinc-binding dehydrogenase D0856_22050 PF16197 Ketoacyl-synthetase C-terminal extension D0856_22050 PF14765 Polyketide synthase dehydratase D0856_22050 PF00550 Phosphopantetheine attachment site D0856_22050 PF00109 Beta-ketoacyl synthase, N-terminal domain D0856_22050 PF02801 Beta-ketoacyl synthase, C-terminal domain D0856_22050 PF08659 KR domain D0856_22050 PF00698 Acyl transferase domain D0856_22060 PF00106 short chain dehydrogenase D0856_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_22075 PF03466 LysR substrate binding domain D0856_22105 PF03466 LysR substrate binding domain D0856_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_22115 PF02254 TrkA-N domain D0856_22115 PF00999 Sodium/hydrogen exchanger family D0856_22120 PF02525 Flavodoxin-like fold D0856_22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_22125 PF03466 LysR substrate binding domain D0856_22145 PF07690 Major Facilitator Superfamily D0856_22160 PF00857 Isochorismatase family D0856_22165 PF01965 DJ-1/PfpI family D0856_22165 PF12833 Helix-turn-helix domain D0856_22170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0856_22180 PF00884 Sulfatase D0856_22180 PF08019 Phosphoethanolamine transferase EptA/EptB D0856_22185 PF01219 Prokaryotic diacylglycerol kinase D0856_22195 PF00672 HAMP domain D0856_22195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22195 PF00512 His Kinase A (phospho-acceptor) domain D0856_22200 PF00486 Transcriptional regulatory protein, C terminal D0856_22200 PF00072 Response regulator receiver domain D0856_22205 PF08218 Citrate lyase ligase C-terminal domain D0856_22205 PF00583 Acetyltransferase (GNAT) family D0856_22210 PF00106 short chain dehydrogenase D0856_22225 PF01323 DSBA-like thioredoxin domain D0856_22240 PF00255 Glutathione peroxidase D0856_22245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0856_22255 PF07690 Major Facilitator Superfamily D0856_22270 PF01966 HD domain D0856_22285 PF07969 Amidohydrolase family D0856_22290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0856_22295 PF00571 CBS domain D0856_22295 PF01769 Divalent cation transporter D0856_22295 PF03448 MgtE intracellular N domain D0856_22300 PF03109 ABC1 family D0856_22305 PF00529 HlyD membrane-fusion protein of T1SS D0856_22305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_22330 PF00486 Transcriptional regulatory protein, C terminal D0856_22330 PF00072 Response regulator receiver domain D0856_22335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22335 PF00672 HAMP domain D0856_22335 PF00512 His Kinase A (phospho-acceptor) domain D0856_22335 PF16527 Two-component sensor protein CpxA, periplasmic domain D0856_22345 PF00392 Bacterial regulatory proteins, gntR family D0856_22345 PF00155 Aminotransferase class I and II D0856_22355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_22360 PF00873 AcrB/AcrD/AcrF family D0856_22365 PF13520 Amino acid permease D0856_22370 PF01037 Lrp/AsnC ligand binding domain D0856_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_22380 PF03466 LysR substrate binding domain D0856_22395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0856_22395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0856_22400 PF00672 HAMP domain D0856_22400 PF00072 Response regulator receiver domain D0856_22400 PF00512 His Kinase A (phospho-acceptor) domain D0856_22400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0856_22400 PF01627 Hpt domain D0856_22405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0856_22410 PF01554 MatE D0856_22415 PF04363 Protein of unknown function (DUF496) D0856_22425 PF04337 Protein of unknown function, DUF480 D0856_22430 PF01541 GIY-YIG catalytic domain D0856_22435 PF13407 Periplasmic binding protein domain D0856_22440 PF00072 Response regulator receiver domain D0856_22440 PF09308 LuxQ, periplasmic D0856_22440 PF00512 His Kinase A (phospho-acceptor) domain D0856_22440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22455 PF01037 Lrp/AsnC ligand binding domain D0856_22485 PF02355 Protein export membrane protein D0856_22485 PF13721 SecD export protein N-terminal TM region D0856_22485 PF07549 SecD/SecF GG Motif D0856_22490 PF02355 Protein export membrane protein D0856_22490 PF07549 SecD/SecF GG Motif D0856_22500 PF01810 LysE type translocator D0856_22505 PF00106 short chain dehydrogenase D0856_22510 PF02803 Thiolase, C-terminal domain D0856_22510 PF00108 Thiolase, N-terminal domain D0856_22520 PF00561 alpha/beta hydrolase fold D0856_22520 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D0856_22530 PF03264 NapC/NirT cytochrome c family, N-terminal region D0856_22535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D0856_22540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0856_22540 PF00384 Molybdopterin oxidoreductase D0856_22540 PF01568 Molydopterin dinucleotide binding domain D0856_22550 PF12838 4Fe-4S dicluster domain D0856_22550 PF13187 4Fe-4S dicluster domain D0856_22555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0856_22555 PF07730 Histidine kinase D0856_22555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22555 PF00672 HAMP domain D0856_22560 PF00072 Response regulator receiver domain D0856_22560 PF00196 Bacterial regulatory proteins, luxR family D0856_22575 PF01546 Peptidase family M20/M25/M40 D0856_22575 PF07687 Peptidase dimerisation domain D0856_22580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0856_22590 PF00873 AcrB/AcrD/AcrF family D0856_22595 PF00672 HAMP domain D0856_22595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_22595 PF12729 Four helix bundle sensory module for signal transduction D0856_22600 PF00472 RF-1 domain D0856_22605 PF13419 Haloacid dehalogenase-like hydrolase D0856_22610 PF00196 Bacterial regulatory proteins, luxR family D0856_22610 PF00072 Response regulator receiver domain D0856_22635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0856_22635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0856_22645 PF05736 OprF membrane domain D0856_22645 PF00691 OmpA family D0856_22665 PF00313 'Cold-shock' DNA-binding domain D0856_22670 PF03889 Alternative ribosome-rescue factor A D0856_22680 PF00990 Diguanylate cyclase, GGDEF domain D0856_22695 PF12704 MacB-like periplasmic core domain D0856_22695 PF02687 FtsX-like permease family D0856_22695 PF00005 ABC transporter D0856_22700 PF00005 ABC transporter D0856_22700 PF02687 FtsX-like permease family D0856_22700 PF12704 MacB-like periplasmic core domain D0856_22710 PF00140 Sigma-70 factor, region 1.2 D0856_22710 PF04542 Sigma-70 region 2 D0856_22710 PF04545 Sigma-70, region 4 D0856_22710 PF04539 Sigma-70 region 3 D0856_22720 PF00005 ABC transporter D0856_22725 PF00664 ABC transporter transmembrane region D0856_22725 PF00005 ABC transporter D0856_22730 PF02321 Outer membrane efflux protein D0856_22735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_22735 PF00072 Response regulator receiver domain D0856_22760 PF00672 HAMP domain D0856_22760 PF17200 Single Cache domain 2 D0856_22760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_22765 PF00210 Ferritin-like domain D0856_22775 PF17676 LD-carboxypeptidase C-terminal domain D0856_22775 PF02016 LD-carboxypeptidase N-terminal domain D0856_22780 PF07995 Glucose / Sorbosone dehydrogenase D0856_22785 PF00465 Iron-containing alcohol dehydrogenase D0856_22795 PF00892 EamA-like transporter family D0856_22805 PF03466 LysR substrate binding domain D0856_22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_22815 PF13193 AMP-binding enzyme C-terminal domain D0856_22815 PF00501 AMP-binding enzyme D0856_22825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D0856_22830 PF01329 Pterin 4 alpha carbinolamine dehydratase D0856_22860 PF12843 Putative quorum-sensing-regulated virulence factor D0856_22880 PF01470 Pyroglutamyl peptidase D0856_22890 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0856_22890 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0856_22895 PF00563 EAL domain D0856_22895 PF03707 Bacterial signalling protein N terminal repeat D0856_22895 PF00990 Diguanylate cyclase, GGDEF domain D0856_22900 PF00271 Helicase conserved C-terminal domain D0856_22900 PF00270 DEAD/DEAH box helicase D0856_22920 PF12792 CSS motif domain associated with EAL D0856_22920 PF00563 EAL domain D0856_22925 PF00005 ABC transporter D0856_22940 PF12849 PBP superfamily domain D0856_22950 PF12833 Helix-turn-helix domain D0856_22955 PF08206 Ribonuclease B OB domain D0856_22955 PF00773 RNB domain D0856_22955 PF00575 S1 RNA binding domain D0856_22960 PF03880 DbpA RNA binding domain D0856_22960 PF00270 DEAD/DEAH box helicase D0856_22960 PF00271 Helicase conserved C-terminal domain D0856_22970 PF00871 Acetokinase family D0856_22975 PF00034 Cytochrome c D0856_22975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0856_22985 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0856_22990 PF00034 Cytochrome c D0856_23005 PF00682 HMGL-like D0856_23010 PF00378 Enoyl-CoA hydratase/isomerase D0856_23015 PF01039 Carboxyl transferase domain D0856_23020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0856_23020 PF02770 Acyl-CoA dehydrogenase, middle domain D0856_23020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0856_23025 PF09278 MerR, DNA binding D0856_23025 PF00376 MerR family regulatory protein D0856_23030 PF00108 Thiolase, N-terminal domain D0856_23030 PF02803 Thiolase, C-terminal domain D0856_23035 PF00171 Aldehyde dehydrogenase family D0856_23045 PF00378 Enoyl-CoA hydratase/isomerase D0856_23050 PF00378 Enoyl-CoA hydratase/isomerase D0856_23055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0856_23055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0856_23070 PF06481 COX Aromatic Rich Motif D0856_23070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0856_23075 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0856_23080 PF00510 Cytochrome c oxidase subunit III D0856_23085 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D0856_23090 PF01040 UbiA prenyltransferase family D0856_23095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_23095 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_23110 PF00171 Aldehyde dehydrogenase family D0856_23120 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_23135 PF07504 Fungalysin/Thermolysin Propeptide Motif D0856_23135 PF01447 Thermolysin metallopeptidase, catalytic domain D0856_23135 PF03413 Peptidase propeptide and YPEB domain D0856_23135 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0856_23135 PF04151 Bacterial pre-peptidase C-terminal domain D0856_23155 PF03466 LysR substrate binding domain D0856_23155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23170 PF03466 LysR substrate binding domain D0856_23185 PF00005 ABC transporter D0856_23190 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_23195 PF00528 Binding-protein-dependent transport system inner membrane component D0856_23200 PF00528 Binding-protein-dependent transport system inner membrane component D0856_23210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23210 PF03466 LysR substrate binding domain D0856_23215 PF13417 Glutathione S-transferase, N-terminal domain D0856_23215 PF00043 Glutathione S-transferase, C-terminal domain D0856_23225 PF00884 Sulfatase D0856_23230 PF04205 FMN-binding domain D0856_23230 PF03358 NADPH-dependent FMN reductase D0856_23230 PF00890 FAD binding domain D0856_23235 PF02424 ApbE family D0856_23250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23250 PF03466 LysR substrate binding domain D0856_23260 PF01012 Electron transfer flavoprotein domain D0856_23265 PF01012 Electron transfer flavoprotein domain D0856_23265 PF00766 Electron transfer flavoprotein FAD-binding domain D0856_23270 PF02817 e3 binding domain D0856_23270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0856_23270 PF00364 Biotin-requiring enzyme D0856_23275 PF02779 Transketolase, pyrimidine binding domain D0856_23275 PF02780 Transketolase, C-terminal domain D0856_23280 PF00676 Dehydrogenase E1 component D0856_23295 PF00012 Hsp70 protein D0856_23300 PF04314 Copper chaperone PCu(A)C D0856_23330 PF00486 Transcriptional regulatory protein, C terminal D0856_23330 PF00072 Response regulator receiver domain D0856_23345 PF00245 Alkaline phosphatase D0856_23360 PF00082 Subtilase family D0856_23360 PF01483 Proprotein convertase P-domain D0856_23370 PF08448 PAS fold D0856_23370 PF00990 Diguanylate cyclase, GGDEF domain D0856_23380 PF03222 Tryptophan/tyrosine permease family D0856_23385 PF00990 Diguanylate cyclase, GGDEF domain D0856_23385 PF00563 EAL domain D0856_23385 PF08448 PAS fold D0856_23400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_23400 PF14824 Sirohaem biosynthesis protein central D0856_23400 PF10414 Sirohaem synthase dimerisation region D0856_23405 PF00591 Glycosyl transferase family, a/b domain D0856_23405 PF02885 Glycosyl transferase family, helical bundle domain D0856_23410 PF01738 Dienelactone hydrolase family D0856_23415 PF00072 Response regulator receiver domain D0856_23415 PF03861 ANTAR domain D0856_23425 PF00005 ABC transporter D0856_23435 PF00005 ABC transporter D0856_23440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0856_23440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0856_23440 PF13806 Rieske-like [2Fe-2S] domain D0856_23440 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0856_23440 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_23440 PF04324 BFD-like [2Fe-2S] binding domain D0856_23470 PF00072 Response regulator receiver domain D0856_23470 PF00211 Adenylate and Guanylate cyclase catalytic domain D0856_23480 PF00563 EAL domain D0856_23480 PF03707 Bacterial signalling protein N terminal repeat D0856_23480 PF00990 Diguanylate cyclase, GGDEF domain D0856_23485 PF07963 Prokaryotic N-terminal methylation motif D0856_23485 PF08334 Type II secretion system (T2SS), protein G D0856_23490 PF00072 Response regulator receiver domain D0856_23490 PF00486 Transcriptional regulatory protein, C terminal D0856_23495 PF00512 His Kinase A (phospho-acceptor) domain D0856_23495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_23495 PF00672 HAMP domain D0856_23500 PF07963 Prokaryotic N-terminal methylation motif D0856_23500 PF14245 Type IV pilin PilA D0856_23505 PF00072 Response regulator receiver domain D0856_23505 PF00486 Transcriptional regulatory protein, C terminal D0856_23520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_23530 PF02195 ParB-like nuclease domain D0856_23545 PF01810 LysE type translocator D0856_23550 PF03222 Tryptophan/tyrosine permease family D0856_23560 PF00106 short chain dehydrogenase D0856_23565 PF01614 Bacterial transcriptional regulator D0856_23565 PF09339 IclR helix-turn-helix domain D0856_23575 PF00582 Universal stress protein family D0856_23585 PF13244 Domain of unknown function (DUF4040) D0856_23585 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D0856_23585 PF00361 Proton-conducting membrane transporter D0856_23585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D0856_23605 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D0856_23610 PF03334 Na+/H+ antiporter subunit D0856_23615 PF02322 Cytochrome bd terminal oxidase subunit II D0856_23620 PF01654 Cytochrome bd terminal oxidase subunit I D0856_23630 PF03466 LysR substrate binding domain D0856_23630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23640 PF01551 Peptidase family M23 D0856_23640 PF08525 Opacity-associated protein A N-terminal motif D0856_23640 PF01476 LysM domain D0856_23675 PF01594 AI-2E family transporter D0856_23680 PF02311 AraC-like ligand binding domain D0856_23680 PF12833 Helix-turn-helix domain D0856_23685 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D0856_23690 PF00440 Bacterial regulatory proteins, tetR family D0856_23695 PF00561 alpha/beta hydrolase fold D0856_23700 PF02525 Flavodoxin-like fold D0856_23710 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ D0856_23720 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D0856_23725 PF08240 Alcohol dehydrogenase GroES-like domain D0856_23725 PF00107 Zinc-binding dehydrogenase D0856_23730 PF00378 Enoyl-CoA hydratase/isomerase D0856_23745 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0856_23745 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0856_23750 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0856_23750 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0856_23755 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0856_23795 PF01569 PAP2 superfamily D0856_23865 PF02583 Metal-sensitive transcriptional repressor D0856_23870 PF00005 ABC transporter D0856_23870 PF00664 ABC transporter transmembrane region D0856_23930 PF00593 TonB dependent receptor D0856_23930 PF07715 TonB-dependent Receptor Plug Domain D0856_23940 PF00563 EAL domain D0856_23940 PF00990 Diguanylate cyclase, GGDEF domain D0856_23940 PF03707 Bacterial signalling protein N terminal repeat D0856_23945 PF00072 Response regulator receiver domain D0856_23945 PF09456 RcsC Alpha-Beta-Loop (ABL) D0856_23945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_23945 PF00512 His Kinase A (phospho-acceptor) domain D0856_23950 PF00990 Diguanylate cyclase, GGDEF domain D0856_23950 PF03707 Bacterial signalling protein N terminal repeat D0856_23950 PF00563 EAL domain D0856_23950 PF13188 PAS domain D0856_23955 PF00072 Response regulator receiver domain D0856_23955 PF00196 Bacterial regulatory proteins, luxR family D0856_23960 PF00990 Diguanylate cyclase, GGDEF domain D0856_23965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_23965 PF03466 LysR substrate binding domain D0856_23970 PF00072 Response regulator receiver domain D0856_23970 PF00196 Bacterial regulatory proteins, luxR family D0856_23980 PF00881 Nitroreductase family D0856_23985 PF01584 CheW-like domain D0856_23985 PF00072 Response regulator receiver domain D0856_23990 PF07963 Prokaryotic N-terminal methylation motif D0856_23990 PF08334 Type II secretion system (T2SS), protein G D0856_24000 PF00892 EamA-like transporter family D0856_24020 PF01569 PAP2 superfamily D0856_24035 PF00893 Small Multidrug Resistance protein D0856_24040 PF00892 EamA-like transporter family D0856_24060 PF00171 Aldehyde dehydrogenase family D0856_24070 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0856_24075 PF00753 Metallo-beta-lactamase superfamily D0856_24085 PF01645 Conserved region in glutamate synthase D0856_24085 PF13187 4Fe-4S dicluster domain D0856_24100 PF01757 Acyltransferase family D0856_24110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_24115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_24175 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0856_24175 PF00691 OmpA family D0856_24235 PF17871 AAA lid domain D0856_24235 PF07724 AAA domain (Cdc48 subfamily) D0856_24235 PF00004 ATPase family associated with various cellular activities (AAA) D0856_24235 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_24270 PF00149 Calcineurin-like phosphoesterase D0856_24270 PF12320 Type 5 capsule protein repressor C-terminal domain D0856_24275 PF13476 AAA domain D0856_24285 PF00704 Glycosyl hydrolases family 18 D0856_24320 PF08212 Lipocalin-like domain D0856_24330 PF07690 Major Facilitator Superfamily D0856_24340 PF03606 C4-dicarboxylate anaerobic carrier D0856_24345 PF00034 Cytochrome c D0856_24350 PF01212 Beta-eliminating lyase D0856_24365 PF05762 VWA domain containing CoxE-like protein D0856_24380 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0856_24380 PF00933 Glycosyl hydrolase family 3 N terminal domain D0856_24380 PF14310 Fibronectin type III-like domain D0856_24385 PF03466 LysR substrate binding domain D0856_24385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_24390 PF09330 D-lactate dehydrogenase, membrane binding D0856_24390 PF01565 FAD binding domain D0856_24410 PF00128 Alpha amylase, catalytic domain D0856_24410 PF09154 Domain of unknown function (DUF1939) D0856_24465 PF17152 Periplasmic sensor domain D0856_24465 PF00990 Diguanylate cyclase, GGDEF domain D0856_24470 PF01156 Inosine-uridine preferring nucleoside hydrolase D0856_24475 PF04324 BFD-like [2Fe-2S] binding domain D0856_24475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0856_24475 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0856_24475 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_24475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0856_24480 PF13806 Rieske-like [2Fe-2S] domain D0856_24485 PF01226 Formate/nitrite transporter D0856_24490 PF10414 Sirohaem synthase dimerisation region D0856_24490 PF14824 Sirohaem biosynthesis protein central D0856_24490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_24505 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0856_24520 PF11756 Nitrous oxide-stimulated promoter D0856_24525 PF01554 MatE D0856_24535 PF07690 Major Facilitator Superfamily D0856_24540 PF00085 Thioredoxin D0856_24545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0856_24545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0856_24575 PF00529 HlyD membrane-fusion protein of T1SS D0856_24575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_24585 PF01594 AI-2E family transporter D0856_24595 PF01238 Phosphomannose isomerase type I D0856_24605 PF07730 Histidine kinase D0856_24605 PF05231 MASE1 D0856_24605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_24610 PF00196 Bacterial regulatory proteins, luxR family D0856_24610 PF00072 Response regulator receiver domain D0856_24665 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0856_24665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0856_24690 PF03477 ATP cone domain D0856_24690 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0856_24700 PF01554 MatE D0856_24705 PF12833 Helix-turn-helix domain D0856_24710 PF00155 Aminotransferase class I and II D0856_24725 PF04076 Bacterial OB fold (BOF) protein D0856_24730 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0856_24730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0856_24740 PF00528 Binding-protein-dependent transport system inner membrane component D0856_24745 PF00005 ABC transporter D0856_24745 PF03459 TOBE domain D0856_24755 PF00990 Diguanylate cyclase, GGDEF domain D0856_24755 PF01590 GAF domain D0856_24755 PF00563 EAL domain D0856_24755 PF00360 Phytochrome region D0856_24765 PF00072 Response regulator receiver domain D0856_24765 PF00990 Diguanylate cyclase, GGDEF domain D0856_24790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0856_24790 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0856_24790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0856_24795 PF02233 NAD(P) transhydrogenase beta subunit D0856_24820 PF03701 Uncharacterised protein family (UPF0181) D0856_24880 PF05036 Sporulation related domain D0856_24885 PF13380 CoA binding domain D0856_24885 PF00583 Acetyltransferase (GNAT) family D0856_24885 PF13607 Succinyl-CoA ligase like flavodoxin domain D0856_24890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_24890 PF03466 LysR substrate binding domain D0856_24895 PF00593 TonB dependent receptor D0856_24895 PF04886 PT repeat D0856_24895 PF07715 TonB-dependent Receptor Plug Domain D0856_24905 PF16363 GDP-mannose 4,6 dehydratase D0856_24915 PF03746 LamB/YcsF family D0856_24920 PF02682 Carboxyltransferase domain, subdomain C and D D0856_24925 PF02626 Carboxyltransferase domain, subdomain A and B D0856_24940 PF00005 ABC transporter D0856_24945 PF13472 GDSL-like Lipase/Acylhydrolase family D0856_24950 PF07055 Enoyl reductase FAD binding domain D0856_24950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0856_24950 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0856_24955 PF13188 PAS domain D0856_24955 PF03707 Bacterial signalling protein N terminal repeat D0856_24955 PF00990 Diguanylate cyclase, GGDEF domain D0856_24955 PF00563 EAL domain D0856_24965 PF01556 DnaJ C terminal domain D0856_24965 PF00226 DnaJ domain D0856_24965 PF00684 DnaJ central domain D0856_24990 PF12793 Sugar transport-related sRNA regulator N-term D0856_24990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0856_25000 PF03061 Thioesterase superfamily D0856_25015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0856_25035 PF02310 B12 binding domain D0856_25035 PF02574 Homocysteine S-methyltransferase D0856_25035 PF00809 Pterin binding enzyme D0856_25035 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0856_25035 PF02607 B12 binding domain D0856_25050 PF03741 Integral membrane protein TerC family D0856_25055 PF02872 5'-nucleotidase, C-terminal domain D0856_25055 PF00149 Calcineurin-like phosphoesterase D0856_25060 PF11398 Protein of unknown function (DUF2813) D0856_25065 PF06496 Protein of unknown function (DUF1097) D0856_25070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_25070 PF03466 LysR substrate binding domain D0856_25080 PF01226 Formate/nitrite transporter D0856_25090 PF01292 Prokaryotic cytochrome b561 D0856_25105 PF00563 EAL domain D0856_25105 PF12792 CSS motif domain associated with EAL D0856_25110 PF00270 DEAD/DEAH box helicase D0856_25110 PF00271 Helicase conserved C-terminal domain D0856_25115 PF04336 Acyl carrier protein phosphodiesterase D0856_25125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_25125 PF12729 Four helix bundle sensory module for signal transduction D0856_25125 PF00672 HAMP domain D0856_25135 PF13419 Haloacid dehalogenase-like hydrolase D0856_25140 PF11849 Domain of unknown function (DUF3369) D0856_25155 PF00294 pfkB family carbohydrate kinase D0856_25160 PF01268 Formate--tetrahydrofolate ligase D0856_25165 PF00483 Nucleotidyl transferase D0856_25170 PF00704 Glycosyl hydrolases family 18 D0856_25170 PF06483 Chitinase C D0856_25175 PF06719 AraC-type transcriptional regulator N-terminus D0856_25175 PF12833 Helix-turn-helix domain D0856_25180 PF00465 Iron-containing alcohol dehydrogenase D0856_25190 PF00005 ABC transporter D0856_25195 PF00528 Binding-protein-dependent transport system inner membrane component D0856_25200 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0856_25205 PF00528 Binding-protein-dependent transport system inner membrane component D0856_25210 PF00563 EAL domain D0856_25210 PF01590 GAF domain D0856_25210 PF00990 Diguanylate cyclase, GGDEF domain D0856_25210 PF00989 PAS fold D0856_25225 PF00356 Bacterial regulatory proteins, lacI family D0856_25225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0856_25230 PF00381 PTS HPr component phosphorylation site D0856_25230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_25235 PF00294 pfkB family carbohydrate kinase D0856_25240 PF02378 Phosphotransferase system, EIIC D0856_25240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_25265 PF00873 AcrB/AcrD/AcrF family D0856_25270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_25275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_25285 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0856_25285 PF01571 Aminomethyltransferase folate-binding domain D0856_25295 PF00464 Serine hydroxymethyltransferase D0856_25300 PF01597 Glycine cleavage H-protein D0856_25305 PF02347 Glycine cleavage system P-protein D0856_25345 PF01734 Patatin-like phospholipase D0856_25350 PF13990 YjcZ-like protein D0856_25355 PF00350 Dynamin family D0856_25380 PF07690 Major Facilitator Superfamily D0856_25590 PF01037 Lrp/AsnC ligand binding domain D0856_25625 PF00069 Protein kinase domain D0856_25650 PF04717 Type VI secretion system, phage-baseplate injector D0856_25655 PF05638 Type VI secretion system effector, Hcp D0856_25660 PF10431 C-terminal, D2-small domain, of ClpB protein D0856_25660 PF17871 AAA lid domain D0856_25660 PF07724 AAA domain (Cdc48 subfamily) D0856_25660 PF00004 ATPase family associated with various cellular activities (AAA) D0856_25665 PF00158 Sigma-54 interaction domain D0856_25665 PF02954 Bacterial regulatory protein, Fis family D0856_25670 PF00691 OmpA family D0856_25785 PF08525 Opacity-associated protein A N-terminal motif D0856_25785 PF01551 Peptidase family M23 D0856_25785 PF01476 LysM domain D0856_25790 PF01926 50S ribosome-binding GTPase D0856_25795 PF00155 Aminotransferase class I and II D0856_25800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_25800 PF00072 Response regulator receiver domain D0856_25820 PF03606 C4-dicarboxylate anaerobic carrier D0856_25825 PF04011 LemA family D0856_25830 PF01435 Peptidase family M48 D0856_25845 PF18081 Fanconi anemia-associated nuclease SAP domain D0856_25845 PF08774 VRR-NUC domain D0856_25855 PF13186 Iron-sulfur cluster-binding domain D0856_25855 PF04055 Radical SAM superfamily D0856_25860 PF03781 Sulfatase-modifying factor enzyme 1 D0856_25875 PF04076 Bacterial OB fold (BOF) protein D0856_25880 PF00781 Diacylglycerol kinase catalytic domain D0856_25885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_25885 PF03466 LysR substrate binding domain D0856_25890 PF01872 RibD C-terminal domain D0856_25890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0856_25895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0856_25895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0856_25900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_25900 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0856_25905 PF00231 ATP synthase D0856_25910 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0856_25910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0856_25910 PF00306 ATP synthase alpha/beta chain, C terminal domain D0856_25915 PF00213 ATP synthase delta (OSCP) subunit D0856_25920 PF00430 ATP synthase B/B' CF(0) D0856_25925 PF00137 ATP synthase subunit C D0856_25930 PF00119 ATP synthase A chain D0856_25950 PF00092 von Willebrand factor type A domain D0856_25965 PF07726 ATPase family associated with various cellular activities (AAA) D0856_25965 PF17863 AAA lid domain D0856_25970 PF04055 Radical SAM superfamily D0856_25970 PF13186 Iron-sulfur cluster-binding domain D0856_25975 PF00884 Sulfatase D0856_25980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_25980 PF03466 LysR substrate binding domain D0856_25990 PF00884 Sulfatase D0856_25995 PF00884 Sulfatase D0856_26000 PF00884 Sulfatase D0856_26005 PF00072 Response regulator receiver domain D0856_26005 PF00486 Transcriptional regulatory protein, C terminal D0856_26010 PF16750 Sensor domain of 2-component histidine kinase D0856_26010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_26010 PF00672 HAMP domain D0856_26010 PF00512 His Kinase A (phospho-acceptor) domain D0856_26030 PF00072 Response regulator receiver domain D0856_26030 PF01627 Hpt domain D0856_26030 PF00512 His Kinase A (phospho-acceptor) domain D0856_26030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_26030 PF00672 HAMP domain D0856_26035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0856_26040 PF02142 MGS-like domain D0856_26045 PF13361 UvrD-like helicase C-terminal domain D0856_26045 PF12462 DNA helicase IV / RNA helicase N terminal D0856_26045 PF00580 UvrD/REP helicase N-terminal domain D0856_26050 PF12805 FUSC-like inner membrane protein yccS D0856_26085 PF07715 TonB-dependent Receptor Plug Domain D0856_26085 PF00593 TonB dependent receptor D0856_26090 PF12833 Helix-turn-helix domain D0856_26090 PF02311 AraC-like ligand binding domain D0856_26095 PF13411 MerR HTH family regulatory protein D0856_26100 PF00005 ABC transporter D0856_26105 PF01032 FecCD transport family D0856_26110 PF01032 FecCD transport family D0856_26115 PF01497 Periplasmic binding protein D0856_26130 PF01048 Phosphorylase superfamily D0856_26135 PF04973 Nicotinamide mononucleotide transporter D0856_26145 PF00356 Bacterial regulatory proteins, lacI family D0856_26150 PF00294 pfkB family carbohydrate kinase D0856_26155 PF13407 Periplasmic binding protein domain D0856_26160 PF02653 Branched-chain amino acid transport system / permease component D0856_26165 PF00005 ABC transporter D0856_26170 PF05025 RbsD / FucU transport protein family D0856_26175 PF00990 Diguanylate cyclase, GGDEF domain D0856_26175 PF00563 EAL domain D0856_26180 PF01048 Phosphorylase superfamily D0856_26185 PF01177 Asp/Glu/Hydantoin racemase D0856_26190 PF00293 NUDIX domain D0856_26195 PF00293 NUDIX domain D0856_26215 PF09335 SNARE associated Golgi protein D0856_26245 PF00072 Response regulator receiver domain D0856_26275 PF04116 Fatty acid hydroxylase superfamily D0856_26285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_26285 PF03466 LysR substrate binding domain D0856_26295 PF00072 Response regulator receiver domain D0856_26295 PF09308 LuxQ, periplasmic D0856_26295 PF00512 His Kinase A (phospho-acceptor) domain D0856_26295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_26300 PF03150 Di-haem cytochrome c peroxidase D0856_26300 PF00034 Cytochrome c D0856_26305 PF00072 Response regulator receiver domain D0856_26305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_26305 PF00512 His Kinase A (phospho-acceptor) domain D0856_26305 PF09456 RcsC Alpha-Beta-Loop (ABL) D0856_26310 PF00563 EAL domain D0856_26310 PF00990 Diguanylate cyclase, GGDEF domain D0856_26310 PF03707 Bacterial signalling protein N terminal repeat D0856_26345 PF01145 SPFH domain / Band 7 family D0856_26345 PF16200 C-terminal region of band_7 D0856_26365 PF00881 Nitroreductase family D0856_26375 PF03466 LysR substrate binding domain D0856_26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_26390 PF08543 Phosphomethylpyrimidine kinase D0856_26395 PF00155 Aminotransferase class I and II D0856_26400 PF06826 Predicted Permease Membrane Region D0856_26400 PF02080 TrkA-C domain D0856_26410 PF13533 Biotin-lipoyl like D0856_26425 PF00135 Carboxylesterase family D0856_26430 PF13091 PLD-like domain D0856_26435 PF01103 Surface antigen D0856_26435 PF17243 POTRA domain TamA domain 1 D0856_26445 PF01544 CorA-like Mg2+ transporter protein D0856_26450 PF00571 CBS domain D0856_26450 PF00005 ABC transporter D0856_26455 PF00528 Binding-protein-dependent transport system inner membrane component D0856_26460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0856_26465 PF00732 GMC oxidoreductase D0856_26465 PF05199 GMC oxidoreductase D0856_26470 PF00171 Aldehyde dehydrogenase family D0856_26475 PF00440 Bacterial regulatory proteins, tetR family D0856_26475 PF13977 BetI-type transcriptional repressor, C-terminal D0856_26480 PF00171 Aldehyde dehydrogenase family D0856_26485 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0856_26485 PF12833 Helix-turn-helix domain D0856_26515 PF03458 UPF0126 domain D0856_26520 PF01546 Peptidase family M20/M25/M40 D0856_26525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_26525 PF03466 LysR substrate binding domain D0856_26530 PF00478 IMP dehydrogenase / GMP reductase domain D0856_26535 PF03853 YjeF-related protein N-terminus D0856_26535 PF01256 Carbohydrate kinase D0856_26545 PF00072 Response regulator receiver domain D0856_26550 PF00248 Aldo/keto reductase family D0856_26565 PF00654 Voltage gated chloride channel D0856_26575 PF01566 Natural resistance-associated macrophage protein D0856_26585 PF01227 GTP cyclohydrolase I D0856_26590 PF00994 Probable molybdopterin binding domain D0856_26590 PF03454 MoeA C-terminal region (domain IV) D0856_26590 PF03453 MoeA N-terminal region (domain I and II) D0856_26595 PF00899 ThiF family D0856_26615 PF00581 Rhodanese-like domain D0856_26625 PF08329 Chitinase A, N-terminal domain D0856_26625 PF00704 Glycosyl hydrolases family 18 D0856_26640 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0856_26645 PF02779 Transketolase, pyrimidine binding domain D0856_26645 PF00456 Transketolase, thiamine diphosphate binding domain D0856_26645 PF02780 Transketolase, C-terminal domain D0856_26650 PF00672 HAMP domain D0856_26650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_26650 PF12729 Four helix bundle sensory module for signal transduction D0856_26655 PF07690 Major Facilitator Superfamily D0856_26660 PF00793 DAHP synthetase I family D0856_26665 PF01389 OmpA-like transmembrane domain D0856_26665 PF00691 OmpA family D0856_26670 PF01040 UbiA prenyltransferase family D0856_26675 PF02628 Cytochrome oxidase assembly protein D0856_26695 PF00510 Cytochrome c oxidase subunit III D0856_26700 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D0856_26705 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0856_26710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0856_26710 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D0856_26745 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0856_26760 PF00892 EamA-like transporter family D0856_26765 PF00462 Glutaredoxin D0856_26780 PF07690 Major Facilitator Superfamily D0856_26785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_26785 PF03466 LysR substrate binding domain D0856_26790 PF01032 FecCD transport family D0856_26800 PF07715 TonB-dependent Receptor Plug Domain D0856_26800 PF00593 TonB dependent receptor D0856_26805 PF12833 Helix-turn-helix domain D0856_26815 PF00005 ABC transporter D0856_26820 PF00563 EAL domain D0856_26820 PF00990 Diguanylate cyclase, GGDEF domain D0856_26820 PF08447 PAS fold D0856_26820 PF08448 PAS fold D0856_26825 PF01476 LysM domain D0856_26825 PF08525 Opacity-associated protein A N-terminal motif D0856_26825 PF01551 Peptidase family M23 D0856_26855 PF02743 Cache domain D0856_26855 PF00672 HAMP domain D0856_26855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_26865 PF03222 Tryptophan/tyrosine permease family D0856_26900 PF00107 Zinc-binding dehydrogenase D0856_26900 PF08240 Alcohol dehydrogenase GroES-like domain D0856_26905 PF02378 Phosphotransferase system, EIIC D0856_26905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_26910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_26915 PF07702 UTRA domain D0856_26915 PF00392 Bacterial regulatory proteins, gntR family D0856_26920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0856_26920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0856_26920 PF02378 Phosphotransferase system, EIIC D0856_26925 PF01074 Glycosyl hydrolases family 38 N-terminal domain D0856_26925 PF07748 Glycosyl hydrolases family 38 C-terminal domain D0856_26925 PF09261 Alpha mannosidase middle domain D0856_26930 PF01238 Phosphomannose isomerase type I D0856_26940 PF00248 Aldo/keto reductase family D0856_26945 PF03466 LysR substrate binding domain D0856_26945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_26960 PF01638 HxlR-like helix-turn-helix D0856_26975 PF01758 Sodium Bile acid symporter family D0856_26990 PF01161 Phosphatidylethanolamine-binding protein D0856_26995 PF02567 Phenazine biosynthesis-like protein D0856_27000 PF01042 Endoribonuclease L-PSP D0856_27005 PF10282 Lactonase, 7-bladed beta-propeller D0856_27010 PF02838 Glycosyl hydrolase family 20, domain 2 D0856_27010 PF00728 Glycosyl hydrolase family 20, catalytic domain D0856_27015 PF01081 KDPG and KHG aldolase D0856_27020 PF00294 pfkB family carbohydrate kinase D0856_27035 PF07969 Amidohydrolase family D0856_27045 PF01418 Helix-turn-helix domain, rpiR family D0856_27045 PF01380 SIS domain D0856_27045 PF02685 Glucokinase D0856_27050 PF17200 Single Cache domain 2 D0856_27050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_27050 PF00672 HAMP domain D0856_27060 PF00005 ABC transporter D0856_27080 PF00384 Molybdopterin oxidoreductase D0856_27080 PF01568 Molydopterin dinucleotide binding domain D0856_27080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0856_27080 PF12838 4Fe-4S dicluster domain D0856_27080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0856_27095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_27100 PF00873 AcrB/AcrD/AcrF family D0856_27145 PF13673 Acetyltransferase (GNAT) domain D0856_27145 PF00583 Acetyltransferase (GNAT) family D0856_27170 PF07728 AAA domain (dynein-related subfamily) D0856_27185 PF13737 Transposase DDE domain D0856_27205 PF00293 NUDIX domain D0856_27220 PF03150 Di-haem cytochrome c peroxidase D0856_27220 PF14376 Haem-binding domain D0856_27220 PF00034 Cytochrome c D0856_27230 PF13302 Acetyltransferase (GNAT) domain D0856_27240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0856_27245 PF00873 AcrB/AcrD/AcrF family D0856_27250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_27260 PF00326 Prolyl oligopeptidase family D0856_27260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0856_27265 PF16326 ABC transporter C-terminal domain D0856_27265 PF12848 ABC transporter D0856_27265 PF00005 ABC transporter D0856_27270 PF01980 tRNA-methyltransferase O D0856_27290 PF00582 Universal stress protein family D0856_27300 PF08220 DeoR-like helix-turn-helix domain D0856_27300 PF00455 DeoR C terminal sensor domain D0856_27305 PF03009 Glycerophosphoryl diester phosphodiesterase family D0856_27310 PF13416 Bacterial extracellular solute-binding protein D0856_27315 PF00528 Binding-protein-dependent transport system inner membrane component D0856_27320 PF00528 Binding-protein-dependent transport system inner membrane component D0856_27325 PF17912 MalK OB fold domain D0856_27325 PF00005 ABC transporter D0856_27345 PF01047 MarR family D0856_27365 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0856_27365 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0856_27370 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_27375 PF01979 Amidohydrolase family D0856_27385 PF01734 Patatin-like phospholipase D0856_27395 PF02678 Pirin D0856_27395 PF05726 Pirin C-terminal cupin domain D0856_27400 PF00313 'Cold-shock' DNA-binding domain D0856_27415 PF00962 Adenosine/AMP deaminase D0856_27420 PF00990 Diguanylate cyclase, GGDEF domain D0856_27420 PF17151 Periplasmic sensor domain D0856_27425 PF03466 LysR substrate binding domain D0856_27425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27440 PF00462 Glutaredoxin D0856_27440 PF08534 Redoxin D0856_27445 PF08241 Methyltransferase domain D0856_27455 PF00990 Diguanylate cyclase, GGDEF domain D0856_27455 PF08448 PAS fold D0856_27460 PF07943 Penicillin-binding protein 5, C-terminal domain D0856_27460 PF00768 D-alanyl-D-alanine carboxypeptidase D0856_27465 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_27470 PF02525 Flavodoxin-like fold D0856_27475 PF03466 LysR substrate binding domain D0856_27475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27480 PF02798 Glutathione S-transferase, N-terminal domain D0856_27490 PF01872 RibD C-terminal domain D0856_27540 PF00106 short chain dehydrogenase D0856_27550 PF03466 LysR substrate binding domain D0856_27550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27555 PF01497 Periplasmic binding protein D0856_27555 PF12833 Helix-turn-helix domain D0856_27560 PF00155 Aminotransferase class I and II D0856_27590 PF00271 Helicase conserved C-terminal domain D0856_27590 PF00270 DEAD/DEAH box helicase D0856_27605 PF03422 Carbohydrate binding module (family 6) D0856_27605 PF01522 Polysaccharide deacetylase D0856_27605 PF00457 Glycosyl hydrolases family 11 D0856_27660 PF03466 LysR substrate binding domain D0856_27660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27675 PF03466 LysR substrate binding domain D0856_27675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27685 PF07690 Major Facilitator Superfamily D0856_27695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0856_27705 PF05816 Toxic anion resistance protein (TelA) D0856_27715 PF05491 RuvB C-terminal winged helix domain D0856_27715 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0856_27715 PF17864 RuvB AAA lid domain D0856_27735 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0856_27740 PF03466 LysR substrate binding domain D0856_27740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27745 PF08240 Alcohol dehydrogenase GroES-like domain D0856_27745 PF00107 Zinc-binding dehydrogenase D0856_27760 PF03466 LysR substrate binding domain D0856_27760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27775 PF00563 EAL domain D0856_27775 PF13185 GAF domain D0856_27775 PF00990 Diguanylate cyclase, GGDEF domain D0856_27780 PF00710 Asparaginase, N-terminal D0856_27780 PF17763 Glutaminase/Asparaginase C-terminal domain D0856_27785 PF03618 Kinase/pyrophosphorylase D0856_27790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0856_27790 PF00391 PEP-utilising enzyme, mobile domain D0856_27790 PF02896 PEP-utilising enzyme, TIM barrel domain D0856_27800 PF00196 Bacterial regulatory proteins, luxR family D0856_27800 PF00072 Response regulator receiver domain D0856_27805 PF00579 tRNA synthetases class I (W and Y) D0856_27815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27815 PF03466 LysR substrate binding domain D0856_27845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27845 PF03466 LysR substrate binding domain D0856_27855 PF03466 LysR substrate binding domain D0856_27855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_27860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0856_27865 PF00873 AcrB/AcrD/AcrF family D0856_27870 PF02321 Outer membrane efflux protein D0856_27875 PF02600 Disulfide bond formation protein DsbB D0856_27880 PF03616 Sodium/glutamate symporter D0856_27895 PF00990 Diguanylate cyclase, GGDEF domain D0856_27895 PF00563 EAL domain D0856_27895 PF03707 Bacterial signalling protein N terminal repeat D0856_27905 PF00196 Bacterial regulatory proteins, luxR family D0856_27910 PF00703 Glycosyl hydrolases family 2 D0856_27910 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0856_27910 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0856_27910 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D0856_27915 PF02028 BCCT, betaine/carnitine/choline family transporter D0856_27920 PF01212 Beta-eliminating lyase D0856_27925 PF13193 AMP-binding enzyme C-terminal domain D0856_27925 PF00501 AMP-binding enzyme D0856_27960 PF00873 AcrB/AcrD/AcrF family D0856_27965 PF13533 Biotin-lipoyl like D0856_27970 PF13091 PLD-like domain D0856_28000 PF09278 MerR, DNA binding D0856_28000 PF00376 MerR family regulatory protein D0856_28015 PF08244 Glycosyl hydrolases family 32 C terminal D0856_28015 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0856_28020 PF02378 Phosphotransferase system, EIIC D0856_28020 PF00367 phosphotransferase system, EIIB D0856_28025 PF07702 UTRA domain D0856_28025 PF00392 Bacterial regulatory proteins, gntR family D0856_28030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28030 PF03466 LysR substrate binding domain D0856_28040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0856_28040 PF13378 Enolase C-terminal domain-like D0856_28050 PF00009 Elongation factor Tu GTP binding domain D0856_28050 PF14492 Elongation Factor G, domain II D0856_28050 PF03764 Elongation factor G, domain IV D0856_28050 PF00679 Elongation factor G C-terminus D0856_28050 PF03144 Elongation factor Tu domain 2 D0856_28105 PF02001 Protein of unknown function DUF134 D0856_28115 PF00528 Binding-protein-dependent transport system inner membrane component D0856_28120 PF00571 CBS domain D0856_28120 PF00005 ABC transporter D0856_28135 PF01048 Phosphorylase superfamily D0856_28140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28140 PF03466 LysR substrate binding domain D0856_28165 PF06942 GlpM protein D0856_28180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0856_28180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0856_28190 PF00857 Isochorismatase family D0856_28195 PF00080 Copper/zinc superoxide dismutase (SODC) D0856_28205 PF00199 Catalase D0856_28205 PF06628 Catalase-related immune-responsive D0856_28225 PF01238 Phosphomannose isomerase type I D0856_28230 PF00155 Aminotransferase class I and II D0856_28235 PF02378 Phosphotransferase system, EIIC D0856_28235 PF00367 phosphotransferase system, EIIB D0856_28240 PF00356 Bacterial regulatory proteins, lacI family D0856_28240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0856_28245 PF08220 DeoR-like helix-turn-helix domain D0856_28245 PF00455 DeoR C terminal sensor domain D0856_28250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_28255 PF01641 SelR domain D0856_28255 PF01625 Peptide methionine sulfoxide reductase D0856_28270 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0856_28270 PF07971 Glycosyl hydrolase family 92 D0856_28275 PF07971 Glycosyl hydrolase family 92 D0856_28275 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0856_28285 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0856_28285 PF07971 Glycosyl hydrolase family 92 D0856_28290 PF07971 Glycosyl hydrolase family 92 D0856_28290 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0856_28295 PF00149 Calcineurin-like phosphoesterase D0856_28295 PF02872 5'-nucleotidase, C-terminal domain D0856_28320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28320 PF03466 LysR substrate binding domain D0856_28325 PF01810 LysE type translocator D0856_28330 PF00581 Rhodanese-like domain D0856_28345 PF13977 BetI-type transcriptional repressor, C-terminal D0856_28345 PF00440 Bacterial regulatory proteins, tetR family D0856_28360 PF03466 LysR substrate binding domain D0856_28360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28375 PF00005 ABC transporter D0856_28375 PF12848 ABC transporter D0856_28380 PF13409 Glutathione S-transferase, N-terminal domain D0856_28385 PF03358 NADPH-dependent FMN reductase D0856_28390 PF03466 LysR substrate binding domain D0856_28390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28395 PF09905 DNA-binding protein VF530 D0856_28400 PF12848 ABC transporter D0856_28400 PF00005 ABC transporter D0856_28415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0856_28420 PF02567 Phenazine biosynthesis-like protein D0856_28435 PF05114 Protein of unknown function (DUF692) D0856_28450 PF01654 Cytochrome bd terminal oxidase subunit I D0856_28455 PF02322 Cytochrome bd terminal oxidase subunit II D0856_28470 PF00293 NUDIX domain D0856_28470 PF13344 Haloacid dehalogenase-like hydrolase D0856_28485 PF00561 alpha/beta hydrolase fold D0856_28490 PF12833 Helix-turn-helix domain D0856_28490 PF12852 Cupin D0856_28495 PF12833 Helix-turn-helix domain D0856_28495 PF17853 GGDEF-like domain D0856_28520 PF04055 Radical SAM superfamily D0856_28525 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0856_28540 PF00512 His Kinase A (phospho-acceptor) domain D0856_28540 PF00672 HAMP domain D0856_28540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0856_28545 PF00072 Response regulator receiver domain D0856_28545 PF00486 Transcriptional regulatory protein, C terminal D0856_28555 PF00583 Acetyltransferase (GNAT) family D0856_28560 PF00113 Enolase, C-terminal TIM barrel domain D0856_28560 PF03952 Enolase, N-terminal domain D0856_28570 PF07690 Major Facilitator Superfamily D0856_28575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28575 PF03466 LysR substrate binding domain D0856_28595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28595 PF03466 LysR substrate binding domain D0856_28610 PF10124 Mu-like prophage major head subunit gpT D0856_28630 PF08765 Mor transcription activator family D0856_28665 PF00892 EamA-like transporter family D0856_28685 PF13533 Biotin-lipoyl like D0856_28695 PF01594 AI-2E family transporter D0856_28700 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0856_28715 PF00175 Oxidoreductase NAD-binding domain D0856_28715 PF00970 Oxidoreductase FAD-binding domain D0856_28725 PF09905 DNA-binding protein VF530 D0856_28730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28730 PF03466 LysR substrate binding domain D0856_28740 PF00881 Nitroreductase family D0856_28750 PF00686 Starch binding domain D0856_28750 PF00128 Alpha amylase, catalytic domain D0856_28755 PF07943 Penicillin-binding protein 5, C-terminal domain D0856_28755 PF00768 D-alanyl-D-alanine carboxypeptidase D0856_28760 PF00561 alpha/beta hydrolase fold D0856_28770 PF01809 Putative membrane protein insertion efficiency factor D0856_28790 PF00268 Ribonucleotide reductase, small chain D0856_28795 PF03477 ATP cone domain D0856_28795 PF00317 Ribonucleotide reductase, all-alpha domain D0856_28795 PF02867 Ribonucleotide reductase, barrel domain D0856_28820 PF00875 DNA photolyase D0856_28820 PF03441 FAD binding domain of DNA photolyase D0856_28825 PF02469 Fasciclin domain D0856_28835 PF01734 Patatin-like phospholipase D0856_28840 PF01914 MarC family integral membrane protein D0856_28845 PF00881 Nitroreductase family D0856_28850 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0856_28850 PF02563 Polysaccharide biosynthesis/export protein D0856_28850 PF10531 SLBB domain D0856_28855 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0856_28860 PF13614 AAA domain D0856_28860 PF13807 G-rich domain on putative tyrosine kinase D0856_28860 PF02706 Chain length determinant protein D0856_28870 PF08803 Putative mono-oxygenase ydhR D0856_28875 PF03466 LysR substrate binding domain D0856_28875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_28880 PF07690 Major Facilitator Superfamily D0856_28910 PF00375 Sodium:dicarboxylate symporter family D0856_28915 PF06803 Protein of unknown function (DUF1232) D0856_28920 PF01546 Peptidase family M20/M25/M40 D0856_28920 PF07687 Peptidase dimerisation domain D0856_28925 PF07670 Nucleoside recognition D0856_28930 PF07670 Nucleoside recognition D0856_28945 PF00128 Alpha amylase, catalytic domain D0856_28950 PF00912 Transglycosylase D0856_28955 PF00128 Alpha amylase, catalytic domain D0856_28955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0856_28955 PF02806 Alpha amylase, C-terminal all-beta domain D0856_28960 PF02446 4-alpha-glucanotransferase D0856_28965 PF00343 Carbohydrate phosphorylase D0856_28970 PF17874 MalT-like TPR region D0856_28970 PF00196 Bacterial regulatory proteins, luxR family D0856_28990 PF02630 SCO1/SenC D0856_29000 PF02378 Phosphotransferase system, EIIC D0856_29000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0856_29000 PF00367 phosphotransferase system, EIIB D0856_29005 PF00589 Phage integrase family D0856_29005 PF02899 Phage integrase, N-terminal SAM-like domain D0856_29055 PF02899 Phage integrase, N-terminal SAM-like domain D0856_29055 PF00589 Phage integrase family D0856_29070 PF03193 RsgA GTPase D0856_29075 PF00375 Sodium:dicarboxylate symporter family D0856_29135 PF08543 Phosphomethylpyrimidine kinase D0856_29145 PF13520 Amino acid permease D0856_29150 PF01276 Orn/Lys/Arg decarboxylase, major domain D0856_29150 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0856_29150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0856_29165 PF18494 Pullulanase Ins domain D0856_29165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0856_29165 PF11852 Domain of unknown function (DUF3372) D0856_29165 PF17967 Pullulanase N2 domain D0856_29165 PF03714 Bacterial pullanase-associated domain D0856_29170 PF04231 Endonuclease I D0856_29180 PF00128 Alpha amylase, catalytic domain D0856_29180 PF02903 Alpha amylase, N-terminal ig-like domain D0856_29180 PF16657 Maltogenic Amylase, C-terminal domain D0856_29195 PF02264 LamB porin D0856_29200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0856_29200 PF00128 Alpha amylase, catalytic domain D0856_29205 PF00990 Diguanylate cyclase, GGDEF domain D0856_29215 PF14824 Sirohaem biosynthesis protein central D0856_29215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0856_29215 PF10414 Sirohaem synthase dimerisation region D0856_29220 PF17179 4Fe-4S dicluster domain D0856_29225 PF00175 Oxidoreductase NAD-binding domain D0856_29225 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D0856_29230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0856_29230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0856_29230 PF13187 4Fe-4S dicluster domain D0856_29245 PF00356 Bacterial regulatory proteins, lacI family D0856_29250 PF02378 Phosphotransferase system, EIIC D0856_29250 PF00367 phosphotransferase system, EIIB D0856_29255 PF03313 Serine dehydratase alpha chain D0856_29255 PF03315 Serine dehydratase beta chain D0856_29260 PF00474 Sodium:solute symporter family D0856_29265 PF07690 Major Facilitator Superfamily D0856_29280 PF00356 Bacterial regulatory proteins, lacI family D0856_29285 PF00239 Resolvase, N terminal domain D0856_29285 PF02796 Helix-turn-helix domain of resolvase D0856_29290 PF07690 Major Facilitator Superfamily D0856_29295 PF06224 Winged helix DNA-binding domain D0856_29300 PF00892 EamA-like transporter family D0856_29305 PF07715 TonB-dependent Receptor Plug Domain D0856_29305 PF00593 TonB dependent receptor D0856_29310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_29310 PF03466 LysR substrate binding domain D0856_29315 PF01497 Periplasmic binding protein D0856_29320 PF01032 FecCD transport family D0856_29325 PF01032 FecCD transport family D0856_29330 PF00005 ABC transporter D0856_29335 PF08360 QacR-like protein, C-terminal region D0856_29335 PF00440 Bacterial regulatory proteins, tetR family D0856_29345 PF13533 Biotin-lipoyl like D0856_29360 PF04225 Opacity-associated protein A LysM-like domain D0856_29360 PF01551 Peptidase family M23 D0856_29375 PF01081 KDPG and KHG aldolase D0856_29380 PF00294 pfkB family carbohydrate kinase D0856_29385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0856_29385 PF00367 phosphotransferase system, EIIB D0856_29385 PF02378 Phosphotransferase system, EIIC D0856_29390 PF13378 Enolase C-terminal domain-like D0856_29390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0856_29395 PF00392 Bacterial regulatory proteins, gntR family D0856_29395 PF07702 UTRA domain D0856_29400 PF00128 Alpha amylase, catalytic domain D0856_29405 PF08244 Glycosyl hydrolases family 32 C terminal D0856_29405 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0856_29415 PF00005 ABC transporter D0856_29415 PF08402 TOBE domain D0856_29420 PF13419 Haloacid dehalogenase-like hydrolase D0856_29425 PF03632 Glycosyl hydrolase family 65 central catalytic domain D0856_29425 PF03636 Glycosyl hydrolase family 65, N-terminal domain D0856_29425 PF03633 Glycosyl hydrolase family 65, C-terminal domain D0856_29430 PF00528 Binding-protein-dependent transport system inner membrane component D0856_29445 PF00356 Bacterial regulatory proteins, lacI family D0856_29465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0856_29465 PF02753 Pili assembly chaperone PapD, C-terminal domain D0856_29470 PF00577 Outer membrane usher protein D0856_29470 PF13953 PapC C-terminal domain D0856_29470 PF13954 PapC N-terminal domain D0856_29500 PF05193 Peptidase M16 inactive domain D0856_29500 PF00675 Insulinase (Peptidase family M16) D0856_29505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0856_29505 PF17200 Single Cache domain 2 D0856_29505 PF00672 HAMP domain D0856_29530 PF08787 Alginate lyase D0856_29540 PF00132 Bacterial transferase hexapeptide (six repeats) D0856_29545 PF00474 Sodium:solute symporter family D0856_29550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_29550 PF03466 LysR substrate binding domain D0856_29560 PF00248 Aldo/keto reductase family D0856_29575 PF02525 Flavodoxin-like fold D0856_29585 PF03466 LysR substrate binding domain D0856_29585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0856_29595 PF00005 ABC transporter D0856_29620 PF01751 Toprim domain D0856_29620 PF01131 DNA topoisomerase D0856_29655 PF18818 Metallopeptidase superfamily domain D0856_29655 PF13362 Toprim domain D0856_29655 PF08401 Domain of unknown function (DUF1738) D0856_29685 PF01848 Hok/gef family D0856_29715 PF07669 Eco57I restriction-modification methylase D0856_29715 PF02384 N-6 DNA Methylase D0856_29720 PF13737 Transposase DDE domain D0856_29750 PF13737 Transposase DDE domain D0856_29800 PF13614 AAA domain D0856_29805 PF04754 Putative transposase, YhgA-like D0856_29810 PF01526 Tn3 transposase DDE domain D0856_29810 PF13700 Domain of unknown function (DUF4158) D0856_29815 PF00239 Resolvase, N terminal domain D0856_29815 PF02796 Helix-turn-helix domain of resolvase D0856_29840 PF04956 TrbC/VIRB2 family D0856_29845 PF05101 Type IV secretory pathway, VirB3-like protein D0856_29850 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0856_29875 PF03524 Conjugal transfer protein D0856_29885 PF03743 Bacterial conjugation TrbI-like protein D0856_29910 PF00437 Type II/IV secretion system protein D0856_29950 PF01848 Hok/gef family D0856_29970 PF10502 Signal peptidase, peptidase S26 D0856_29975 PF01464 Transglycosylase SLT domain D0856_30055 PF01751 Toprim domain D0856_30055 PF01131 DNA topoisomerase D0856_30090 PF13362 Toprim domain D0856_30090 PF18818 Metallopeptidase superfamily domain D0856_30090 PF08401 Domain of unknown function (DUF1738) D0856_30125 PF02281 Transposase Tn5 dimerisation domain D0856_30125 PF14706 Transposase DNA-binding D0856_30125 PF01609 Transposase DDE domain D0856_30145 PF01797 Transposase IS200 like D0856_30185 PF00691 OmpA family D0856_30235 PF02796 Helix-turn-helix domain of resolvase D0856_30235 PF00239 Resolvase, N terminal domain D0856_30240 PF01526 Tn3 transposase DDE domain D0856_30240 PF13700 Domain of unknown function (DUF4158) D0856_30260 PF13614 AAA domain D0856_30295 PF04956 TrbC/VIRB2 family D0856_30300 PF05101 Type IV secretory pathway, VirB3-like protein D0856_30305 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0856_30315 PF00437 Type II/IV secretion system protein D0856_30335 PF03524 Conjugal transfer protein D0856_30345 PF03743 Bacterial conjugation TrbI-like protein D0856_30370 PF00437 Type II/IV secretion system protein D0856_30410 PF01848 Hok/gef family D0856_30430 PF10502 Signal peptidase, peptidase S26 D0856_30435 PF01464 Transglycosylase SLT domain