A9237_00010	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9237_00015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_00040	SM00382	ATPases associated with a variety of cellular activities
A9237_00055	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_00105	SM00382	ATPases associated with a variety of cellular activities
A9237_00115	SM00945	ProQ/FINO family
A9237_00120	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9237_00120	SM00245	tail specific protease
A9237_00155	SM00981	A9237_00155
A9237_00165	SM00382	ATPases associated with a variety of cellular activities
A9237_00280	SM00477	DNA/RNA non-specific endonuclease
A9237_00280	SM00892	DNA/RNA non-specific endonuclease
A9237_00330	SM00387	Histidine kinase-like ATPases
A9237_00330	SM00388	His Kinase A (phosphoacceptor) domain
A9237_00330	SM00448	cheY-homologous receiver domain
A9237_00335	SM00897	FIST N domain
A9237_00335	SM01204	A9237_00335
A9237_00385	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_00385	SM00419	helix_turn_helix, cAMP Regulatory protein
A9237_00415	SM00382	ATPases associated with a variety of cellular activities
A9237_00465	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_00500	SM00382	ATPases associated with a variety of cellular activities
A9237_00515	SM00387	Histidine kinase-like ATPases
A9237_00515	SM00388	His Kinase A (phosphoacceptor) domain
A9237_00520	SM00382	ATPases associated with a variety of cellular activities
A9237_00520	SM00448	cheY-homologous receiver domain
A9237_00535	SM00382	ATPases associated with a variety of cellular activities
A9237_00545	SM00852	Probable molybdopterin binding domain
A9237_00565	SM01144	A9237_00565
A9237_00610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_00625	SM00267	diguanylate cyclase
A9237_00630	SM00448	cheY-homologous receiver domain
A9237_00690	SM00382	ATPases associated with a variety of cellular activities
A9237_00690	SM00448	cheY-homologous receiver domain
A9237_00760	SM01276	A9237_00760
A9237_00785	SM00267	diguanylate cyclase
A9237_00790	SM00387	Histidine kinase-like ATPases
A9237_00790	SM00388	His Kinase A (phosphoacceptor) domain
A9237_00790	SM00448	cheY-homologous receiver domain
A9237_00810	SM01266	A9237_00810
A9237_00815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_00815	SM00091	PAS domain
A9237_00815	SM00387	Histidine kinase-like ATPases
A9237_00815	SM00388	His Kinase A (phosphoacceptor) domain
A9237_00815	SM00448	cheY-homologous receiver domain
A9237_00825	SM01118	A9237_00825
A9237_00845	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_00860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9237_00880	SM00495	Chitin-binding domain type 3
A9237_00900	SM00495	Chitin-binding domain type 3
A9237_01035	SM00382	ATPases associated with a variety of cellular activities
A9237_01040	SM00382	ATPases associated with a variety of cellular activities
A9237_01060	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A9237_01100	SM00382	ATPases associated with a variety of cellular activities
A9237_01105	SM01130	A9237_01105
A9237_01135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_01135	SM00895	A9237_01135
A9237_01145	SM00267	diguanylate cyclase
A9237_01165	SM00635	Bacterial Ig-like domain 2
A9237_01180	SM00052	Putative diguanylate phosphodiesterase
A9237_01180	SM00448	cheY-homologous receiver domain
A9237_01190	SM00387	Histidine kinase-like ATPases
A9237_01190	SM00388	His Kinase A (phosphoacceptor) domain
A9237_01190	SM00448	cheY-homologous receiver domain
A9237_01205	SM00862	Transcriptional regulatory protein, C terminal
A9237_01215	SM00257	Lysin motif
A9237_01295	SM00382	ATPases associated with a variety of cellular activities
A9237_01315	SM00855	Phosphoglycerate mutase family
A9237_01335	SM00903	Flavin reductase like domain
A9237_01355	SM00479	A9237_01355
A9237_01390	SM00411	bacterial (prokaryotic) histone like domain
A9237_01400	SM00354	helix_turn _helix lactose operon repressor
A9237_01410	SM00640	Glycosyl hydrolases family 32
A9237_01420	SM00873	B3/4 domain
A9237_01420	SM00874	tRNA synthetase B5 domain
A9237_01420	SM00896	Ferredoxin-fold anticodon binding domain
A9237_01430	SM00267	diguanylate cyclase
A9237_01455	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_01500	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9237_01515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_01515	SM00866	A9237_01515
A9237_01575	SM00671	Sel1-like repeats.
A9237_01615	SM00487	DEAD-like helicases superfamily
A9237_01615	SM00490	helicase superfamily c-terminal domain
A9237_01615	SM00847	Helicase associated domain (HA2)  Add an annotation
A9237_01620	SM00919	Malic enzyme, NAD binding domain
A9237_01620	SM01274	A9237_01620
A9237_01635	SM00267	diguanylate cyclase
A9237_01660	SM00382	ATPases associated with a variety of cellular activities
A9237_01665	SM00382	ATPases associated with a variety of cellular activities
A9237_01685	SM00052	Putative diguanylate phosphodiesterase
A9237_01690	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_01700	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_01715	SM00267	diguanylate cyclase
A9237_01735	SM00387	Histidine kinase-like ATPases
A9237_01740	SM00448	cheY-homologous receiver domain
A9237_01825	SM00382	ATPases associated with a variety of cellular activities
A9237_01855	SM00363	S4 RNA-binding domain
A9237_01860	SM00487	DEAD-like helicases superfamily
A9237_01860	SM00490	helicase superfamily c-terminal domain
A9237_01865	SM00267	diguanylate cyclase
A9237_01875	SM00448	cheY-homologous receiver domain
A9237_01875	SM00862	Transcriptional regulatory protein, C terminal
A9237_01880	SM00387	Histidine kinase-like ATPases
A9237_01940	SM00421	helix_turn_helix, Lux Regulon
A9237_01940	SM00448	cheY-homologous receiver domain
A9237_01945	SM00387	Histidine kinase-like ATPases
A9237_01945	SM00388	His Kinase A (phosphoacceptor) domain
A9237_01950	SM00450	Rhodanese Homology Domain
A9237_01980	SM00382	ATPases associated with a variety of cellular activities
A9237_01990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9237_01990	SM00382	ATPases associated with a variety of cellular activities
A9237_02015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_02015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_02025	SM00155	Phospholipase D. Active site motifs.
A9237_02080	SM00382	ATPases associated with a variety of cellular activities
A9237_02100	SM00382	ATPases associated with a variety of cellular activities
A9237_02105	SM00382	ATPases associated with a variety of cellular activities
A9237_02115	SM01131	A9237_02115
A9237_02185	SM00840	A9237_02185
A9237_02200	SM00052	Putative diguanylate phosphodiesterase
A9237_02255	SM00528	Domain in histone-like proteins of HNS family
A9237_02345	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_02345	SM00876	Biotin and Thiamin Synthesis associated domain
A9237_02375	SM00382	ATPases associated with a variety of cellular activities
A9237_02385	SM00843	A9237_02385
A9237_02390	SM00344	helix_turn_helix ASNC type
A9237_02395	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A9237_02395	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A9237_02540	SM00346	helix_turn_helix isocitrate lyase regulation
A9237_02595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_02595	SM00895	A9237_02595
A9237_02605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_02605	SM00895	A9237_02605
A9237_02610	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_02610	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_02615	SM00479	A9237_02615
A9237_02625	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_02650	SM00710	Parallel beta-helix repeats
A9237_02665	SM00382	ATPases associated with a variety of cellular activities
A9237_02710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_02710	SM00895	A9237_02710
A9237_02715	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_02730	SM00862	Transcriptional regulatory protein, C terminal
A9237_02755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_02755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_02770	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_02770	SM00419	helix_turn_helix, cAMP Regulatory protein
A9237_02790	SM00831	Cation transporter/ATPase, N-terminus
A9237_02810	SM00382	ATPases associated with a variety of cellular activities
A9237_02815	SM00382	ATPases associated with a variety of cellular activities
A9237_02825	SM00382	ATPases associated with a variety of cellular activities
A9237_02830	SM00382	ATPases associated with a variety of cellular activities
A9237_02920	SM00487	DEAD-like helicases superfamily
A9237_02975	SM00387	Histidine kinase-like ATPases
A9237_02975	SM00388	His Kinase A (phosphoacceptor) domain
A9237_02975	SM00448	cheY-homologous receiver domain
A9237_03010	SM00028	Tetratricopeptide repeats
A9237_03065	SM00382	ATPases associated with a variety of cellular activities
A9237_03070	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9237_03075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_03135	SM00342	helix_turn_helix, arabinose operon control protein
A9237_03165	SM00448	cheY-homologous receiver domain
A9237_03165	SM00862	Transcriptional regulatory protein, C terminal
A9237_03175	SM00354	helix_turn _helix lactose operon repressor
A9237_03210	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9237_03210	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9237_03210	SM00493	A9237_03210
A9237_03240	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_03245	SM00382	ATPases associated with a variety of cellular activities
A9237_03245	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_03255	SM00357	Cold shock protein domain
A9237_03280	SM00491	A9237_03280
A9237_03300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_03300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_03310	SM00382	ATPases associated with a variety of cellular activities
A9237_03335	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_03335	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9237_03340	SM00382	ATPases associated with a variety of cellular activities
A9237_03380	SM00763	PrkA AAA domain
A9237_03415	SM00382	ATPases associated with a variety of cellular activities
A9237_03420	SM00849	Metallo-beta-lactamase superfamily
A9237_03435	SM00382	ATPases associated with a variety of cellular activities
A9237_03450	SM00487	DEAD-like helicases superfamily
A9237_03450	SM00490	helicase superfamily c-terminal domain
A9237_03450	SM00982	A9237_03450
A9237_03450	SM01058	CarD-like/TRCF domain
A9237_03500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_03500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_03530	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_03550	SM00831	Cation transporter/ATPase, N-terminus
A9237_03560	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_03560	SM00267	diguanylate cyclase
A9237_03590	SM00344	helix_turn_helix ASNC type
A9237_03650	SM00978	A9237_03650
A9237_03660	SM00563	Phosphate acyltransferases
A9237_03690	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9237_03720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_03725	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_03730	SM01144	A9237_03730
A9237_03750	SM00411	bacterial (prokaryotic) histone like domain
A9237_03755	SM00382	ATPases associated with a variety of cellular activities
A9237_03755	SM00464	Found in ATP-dependent protease La (LON)
A9237_03760	SM00382	ATPases associated with a variety of cellular activities
A9237_03760	SM00994	ClpX C4-type zinc finger
A9237_03760	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_03780	SM00387	Histidine kinase-like ATPases
A9237_03780	SM00388	His Kinase A (phosphoacceptor) domain
A9237_03785	SM00382	ATPases associated with a variety of cellular activities
A9237_03785	SM00448	cheY-homologous receiver domain
A9237_03840	SM00487	DEAD-like helicases superfamily
A9237_03840	SM00490	helicase superfamily c-terminal domain
A9237_03845	SM01091	Transporter associated domain
A9237_03865	SM00823	Phosphopantetheine attachment site
A9237_03950	SM00474	3'-5' exonuclease
A9237_03980	SM00487	DEAD-like helicases superfamily
A9237_03980	SM00491	A9237_03980
A9237_03995	SM00836	DALR anticodon binding domain
A9237_03995	SM01016	Arginyl tRNA synthetase N terminal dom
A9237_04015	SM00899	A9237_04015
A9237_04020	SM00342	helix_turn_helix, arabinose operon control protein
A9237_04030	SM00382	ATPases associated with a variety of cellular activities
A9237_04040	SM00881	CoA binding domain
A9237_04055	SM00861	Transketolase, pyrimidine binding domain
A9237_04170	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9237_04190	SM00387	Histidine kinase-like ATPases
A9237_04195	SM00862	Transcriptional regulatory protein, C terminal
A9237_04225	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_04230	SM00938	Nitrogen regulatory protein P-II
A9237_04265	SM00028	Tetratricopeptide repeats
A9237_04305	SM00244	prohibitin homologues
A9237_04335	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9237_04335	SM00292	breast cancer carboxy-terminal domain
A9237_04335	SM00532	Ligase N family
A9237_04340	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A9237_04405	SM00047	Lysozyme subfamily 2
A9237_04450	SM00138	Methyltransferase, chemotaxis proteins 
A9237_04455	SM00260	Two component signalling adaptor domain
A9237_04455	SM00448	cheY-homologous receiver domain
A9237_04460	SM00858	A9237_04460
A9237_04535	SM01081	Putative carbohydrate binding domain
A9237_04555	SM00463	Small MutS-related domain
A9237_04560	SM00363	S4 RNA-binding domain
A9237_04595	SM00937	A9237_04595
A9237_04615	SM01400	A9237_04615
A9237_04740	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_04755	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_04755	SM01091	Transporter associated domain
A9237_04810	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9237_04825	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_04840	SM00862	Transcriptional regulatory protein, C terminal
A9237_04850	SM00642	Alpha-amylase domain
A9237_04860	SM00354	helix_turn _helix lactose operon repressor
A9237_04870	SM00382	ATPases associated with a variety of cellular activities
A9237_04870	SM00930	A9237_04870
A9237_04910	SM00028	Tetratricopeptide repeats
A9237_04915	SM00267	diguanylate cyclase
A9237_04925	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9237_04925	SM00475	5'-3' exonuclease
A9237_04950	SM00981	A9237_04950
A9237_04975	SM00861	Transketolase, pyrimidine binding domain
A9237_05025	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9237_05085	SM01211	A9237_05085
A9237_05090	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_05135	SM00271	DnaJ molecular chaperone homology domain
A9237_05270	SM00495	Chitin-binding domain type 3
A9237_05285	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_05285	SM01240	A9237_05285
A9237_05300	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9237_05300	SM00267	diguanylate cyclase
A9237_05310	SM00382	ATPases associated with a variety of cellular activities
A9237_05315	SM00564	beta-propeller repeat
A9237_05335	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_05345	SM00562	A9237_05345
A9237_05370	SM00271	DnaJ molecular chaperone homology domain
A9237_05415	SM01323	A9237_05415
A9237_05440	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_05500	SM00382	ATPases associated with a variety of cellular activities
A9237_05530	SM00091	PAS domain
A9237_05530	SM00387	Histidine kinase-like ATPases
A9237_05530	SM00388	His Kinase A (phosphoacceptor) domain
A9237_05535	SM00448	cheY-homologous receiver domain
A9237_05535	SM00862	Transcriptional regulatory protein, C terminal
A9237_05605	SM00382	ATPases associated with a variety of cellular activities
A9237_05605	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_05615	SM00363	S4 RNA-binding domain
A9237_05625	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_05635	SM00830	Chorismate mutase type II
A9237_05655	SM00382	ATPases associated with a variety of cellular activities
A9237_05670	SM00830	Chorismate mutase type II
A9237_05715	SM00448	cheY-homologous receiver domain
A9237_05715	SM00850	LytTr DNA-binding domain
A9237_05740	SM00904	Riboflavin kinase
A9237_05755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_05785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9237_05795	SM00927	DNA mismatch repair enzyme MutH
A9237_05815	SM00382	ATPases associated with a variety of cellular activities
A9237_05860	SM00487	DEAD-like helicases superfamily
A9237_05860	SM00490	helicase superfamily c-terminal domain
A9237_05890	SM00986	Uracil DNA glycosylase superfamily
A9237_05890	SM00987	UreE urease accessory protein, C-terminal domain 
A9237_05895	SM00518	AP endonuclease family 2
A9237_05940	SM00448	cheY-homologous receiver domain
A9237_05940	SM00862	Transcriptional regulatory protein, C terminal
A9237_05950	SM00073	Histidine Phosphotransfer domain
A9237_05950	SM00091	PAS domain
A9237_05950	SM00387	Histidine kinase-like ATPases
A9237_05950	SM00388	His Kinase A (phosphoacceptor) domain
A9237_05950	SM00448	cheY-homologous receiver domain
A9237_05955	SM00091	PAS domain
A9237_05955	SM00267	diguanylate cyclase
A9237_05960	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_06035	SM00851	MGS-like domain
A9237_06035	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9237_06040	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9237_06055	SM00957	SecA DEAD-like domain
A9237_06055	SM00958	SecA preprotein cross-linking domain
A9237_06070	SM00864	Tubulin/FtsZ family, GTPase domain
A9237_06070	SM00865	Tubulin/FtsZ family, C-terminal domain
A9237_06075	SM00842	Cell division protein FtsA
A9237_06160	SM00749	bacterial OsmY and nodulation domain
A9237_06215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9237_06220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9237_06225	SM00434	DNA Topoisomerase IV
A9237_06230	SM00387	Histidine kinase-like ATPases
A9237_06230	SM00433	TopoisomeraseII
A9237_06270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_06280	SM00880	A9237_06280
A9237_06280	SM01118	A9237_06280
A9237_06295	SM00287	Bacterial SH3 domain homologues
A9237_06320	SM00382	ATPases associated with a variety of cellular activities
A9237_06340	SM00905	Dihydroneopterin aldolase
A9237_06345	SM01207	A9237_06345
A9237_06370	SM00400	zinc finger
A9237_06370	SM00493	A9237_06370
A9237_06370	SM00766	DNA primase DnaG DnaB-binding
A9237_06400	SM00563	Phosphate acyltransferases
A9237_06425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_06425	SM00387	Histidine kinase-like ATPases
A9237_06425	SM00388	His Kinase A (phosphoacceptor) domain
A9237_06430	SM00448	cheY-homologous receiver domain
A9237_06430	SM00862	Transcriptional regulatory protein, C terminal
A9237_06450	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9237_06450	SM01134	A9237_06450
A9237_06460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_06460	SM00895	A9237_06460
A9237_06465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_06465	SM00267	diguanylate cyclase
A9237_06505	SM00917	LeuA allosteric (dimerisation) domain
A9237_06510	SM01329	A9237_06510
A9237_06530	SM00271	DnaJ molecular chaperone homology domain
A9237_06550	SM00650	Ribosomal RNA adenine dimethylases
A9237_06630	SM00382	ATPases associated with a variety of cellular activities
A9237_06715	SM00382	ATPases associated with a variety of cellular activities
A9237_06775	SM00487	DEAD-like helicases superfamily
A9237_06775	SM00490	helicase superfamily c-terminal domain
A9237_06810	SM00662	RNA polymerases D
A9237_06815	SM00363	S4 RNA-binding domain
A9237_06815	SM01390	A9237_06815
A9237_06880	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9237_06885	SM01374	A9237_06885
A9237_06905	SM00322	K homology RNA-binding domain
A9237_06920	SM01382	A9237_06920
A9237_06920	SM01383	A9237_06920
A9237_06940	SM01403	A9237_06940
A9237_06950	SM00487	DEAD-like helicases superfamily
A9237_06950	SM00490	helicase superfamily c-terminal domain
A9237_06955	SM00354	helix_turn _helix lactose operon repressor
A9237_06970	SM00382	ATPases associated with a variety of cellular activities
A9237_06970	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_07005	SM00465	GIY-YIG type nucleases (URI domain)
A9237_07030	SM00984	UDP binding domain
A9237_07050	SM00829	Enoylreductase
A9237_07090	SM00984	UDP binding domain
A9237_07105	SM00849	Metallo-beta-lactamase superfamily
A9237_07105	SM01027	Beta-Casp domain
A9237_07115	SM00382	ATPases associated with a variety of cellular activities
A9237_07155	SM00858	A9237_07155
A9237_07255	SM00672	Putative lipopolysaccharide-modifying enzyme.
A9237_07275	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9237_07275	SM01232	A9237_07275
A9237_07300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_07300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_07300	SM01049	A9237_07300
A9237_07335	SM00862	Transcriptional regulatory protein, C terminal
A9237_07360	SM00382	ATPases associated with a variety of cellular activities
A9237_07365	SM00382	ATPases associated with a variety of cellular activities
A9237_07415	SM00028	Tetratricopeptide repeats
A9237_07420	SM00072	Guanylate kinase homologues.
A9237_07425	SM01409	A9237_07425
A9237_07430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_07430	SM00954	Region found in RelA / SpoT proteins
A9237_07440	SM00487	DEAD-like helicases superfamily
A9237_07440	SM00490	helicase superfamily c-terminal domain
A9237_07455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_07455	SM00387	Histidine kinase-like ATPases
A9237_07455	SM00388	His Kinase A (phosphoacceptor) domain
A9237_07460	SM00448	cheY-homologous receiver domain
A9237_07460	SM00862	Transcriptional regulatory protein, C terminal
A9237_07475	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_07475	SM00732	Likely ribonuclease with RNase H fold.
A9237_07555	SM00382	ATPases associated with a variety of cellular activities
A9237_07570	SM00363	S4 RNA-binding domain
A9237_07625	SM01230	A9237_07625
A9237_07635	SM00091	PAS domain
A9237_07635	SM00387	Histidine kinase-like ATPases
A9237_07635	SM00388	His Kinase A (phosphoacceptor) domain
A9237_07640	SM00382	ATPases associated with a variety of cellular activities
A9237_07640	SM00448	cheY-homologous receiver domain
A9237_07645	SM00052	Putative diguanylate phosphodiesterase
A9237_07645	SM00267	diguanylate cyclase
A9237_07645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_07655	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_07690	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9237_07690	SM00474	3'-5' exonuclease
A9237_07690	SM00475	5'-3' exonuclease
A9237_07690	SM00482	DNA polymerase A domain
A9237_07705	SM01004	Delta-aminolevulinic acid dehydratase
A9237_07755	SM00052	Putative diguanylate phosphodiesterase
A9237_07755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_07755	SM00091	PAS domain
A9237_07755	SM00267	diguanylate cyclase
A9237_07815	SM00052	Putative diguanylate phosphodiesterase
A9237_07815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_07815	SM00091	PAS domain
A9237_07815	SM00267	diguanylate cyclase
A9237_07820	SM00344	helix_turn_helix ASNC type
A9237_07885	SM00354	helix_turn _helix lactose operon repressor
A9237_07890	SM00220	Serine/Threonine protein kinases, catalytic domain
A9237_07935	SM00382	ATPases associated with a variety of cellular activities
A9237_08010	SM01321	A9237_08010
A9237_08090	SM01001	AIR carboxylase
A9237_08115	SM00257	Lysin motif
A9237_08180	SM00563	Phosphate acyltransferases
A9237_08190	SM00382	ATPases associated with a variety of cellular activities
A9237_08220	SM00267	diguanylate cyclase
A9237_08235	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_08255	SM00382	ATPases associated with a variety of cellular activities
A9237_08295	SM00470	ParB-like nuclease domain
A9237_08310	SM01228	A9237_08310
A9237_08330	SM01234	A9237_08330
A9237_08345	SM00382	ATPases associated with a variety of cellular activities
A9237_08355	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_08360	SM00382	ATPases associated with a variety of cellular activities
A9237_08360	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9237_08365	SM00480	DNA polymerase III beta subunit
A9237_08375	SM00387	Histidine kinase-like ATPases
A9237_08375	SM00433	TopoisomeraseII
A9237_08390	SM00642	Alpha-amylase domain
A9237_08430	SM00829	Enoylreductase
A9237_08530	SM00876	Biotin and Thiamin Synthesis associated domain
A9237_08595	SM00342	helix_turn_helix, arabinose operon control protein
A9237_08605	SM00341	Helicase and RNase D C-terminal
A9237_08605	SM00487	DEAD-like helicases superfamily
A9237_08605	SM00490	helicase superfamily c-terminal domain
A9237_08605	SM00956	A9237_08605
A9237_08630	SM00487	DEAD-like helicases superfamily
A9237_08630	SM00490	helicase superfamily c-terminal domain
A9237_08640	SM00357	Cold shock protein domain
A9237_08640	SM00382	ATPases associated with a variety of cellular activities
A9237_08640	SM00959	Rho termination factor, N-terminal domain
A9237_08725	SM01219	A9237_08725
A9237_08760	SM00052	Putative diguanylate phosphodiesterase
A9237_08760	SM00267	diguanylate cyclase
A9237_08760	SM00897	FIST N domain
A9237_08760	SM01204	A9237_08760
A9237_08765	SM01144	A9237_08765
A9237_08800	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_08805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9237_08870	SM00382	ATPases associated with a variety of cellular activities
A9237_08870	SM00962	SRP54-type protein, GTPase domain
A9237_08870	SM00963	SRP54-type protein, helical bundle domain
A9237_08875	SM00382	ATPases associated with a variety of cellular activities
A9237_08890	SM00450	Rhodanese Homology Domain
A9237_08915	SM00563	Phosphate acyltransferases
A9237_08975	SM00360	RNA recognition motif
A9237_09040	SM00155	Phospholipase D. Active site motifs.
A9237_09095	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9237_09095	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9237_09100	SM00649	Ribosomal protein L11/L12
A9237_09125	SM00663	RNA polymerase I subunit A N-terminus
A9237_09145	SM00986	Uracil DNA glycosylase superfamily
A9237_09145	SM00987	UreE urease accessory protein, C-terminal domain 
A9237_09165	SM00411	bacterial (prokaryotic) histone like domain
A9237_09175	SM01209	A9237_09175
A9237_09175	SM01210	A9237_09175
A9237_09180	SM00798	AICARFT/IMPCHase bienzyme
A9237_09180	SM00851	MGS-like domain
A9237_09190	SM00422	helix_turn_helix, mercury resistance
A9237_09195	SM00862	Transcriptional regulatory protein, C terminal
A9237_09260	SM00267	diguanylate cyclase
A9237_09280	SM00878	Biotin carboxylase C-terminal domain
A9237_09300	SM00479	A9237_09300
A9237_09315	SM00387	Histidine kinase-like ATPases
A9237_09315	SM00388	His Kinase A (phosphoacceptor) domain
A9237_09315	SM00448	cheY-homologous receiver domain
A9237_09350	SM00421	helix_turn_helix, Lux Regulon
A9237_09350	SM00448	cheY-homologous receiver domain
A9237_09385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_09385	SM00387	Histidine kinase-like ATPases
A9237_09385	SM00388	His Kinase A (phosphoacceptor) domain
A9237_09390	SM00448	cheY-homologous receiver domain
A9237_09390	SM00862	Transcriptional regulatory protein, C terminal
A9237_09415	SM00883	Chaperonin 10 Kd subunit
A9237_09440	SM00841	Elongation factor P, C-terminal
A9237_09440	SM01185	A9237_09440
A9237_09500	SM00971	Serine acetyltransferase, N-terminal
A9237_09515	SM00450	Rhodanese Homology Domain
A9237_09530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_09530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_09555	SM00479	A9237_09555
A9237_09640	SM00257	Lysin motif
A9237_09640	SM00646	A9237_09640
A9237_09645	SM00853	MutL C terminal dimerisation domain
A9237_09645	SM01340	A9237_09645
A9237_09665	SM00244	prohibitin homologues
A9237_09670	SM00244	prohibitin homologues
A9237_09680	SM00788	Adenylosuccinate synthetase
A9237_09685	SM00671	Sel1-like repeats.
A9237_09700	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_09700	SM00357	Cold shock protein domain
A9237_09700	SM00955	A9237_09700
A9237_09705	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9237_09750	SM01150	A9237_09750
A9237_09755	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_09755	SM00419	helix_turn_helix, cAMP Regulatory protein
A9237_09780	SM00382	ATPases associated with a variety of cellular activities
A9237_09815	SM00320	WD40 repeats
A9237_09855	SM00838	Elongation factor G C-terminus
A9237_09855	SM00889	Elongation factor G, domain IV
A9237_09875	SM00919	Malic enzyme, NAD binding domain
A9237_09875	SM01274	A9237_09875
A9237_09915	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9237_09980	SM00965	Secretin and TonB N terminus short domain
A9237_10040	SM01005	Alanine racemase, C-terminal domain
A9237_10165	SM01018	B12 binding domain
A9237_10205	SM00421	helix_turn_helix, Lux Regulon
A9237_10215	SM00052	Putative diguanylate phosphodiesterase
A9237_10215	SM00267	diguanylate cyclase
A9237_10235	SM00965	Secretin and TonB N terminus short domain
A9237_10245	SM00028	Tetratricopeptide repeats
A9237_10250	SM00382	ATPases associated with a variety of cellular activities
A9237_10320	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_10340	SM00670	Large family of predicted nucleotide-binding domains
A9237_10345	SM00487	DEAD-like helicases superfamily
A9237_10345	SM00490	helicase superfamily c-terminal domain
A9237_10375	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_10375	SM00924	MgtE intracellular N domain
A9237_10405	SM00382	ATPases associated with a variety of cellular activities
A9237_10420	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_10430	SM00382	ATPases associated with a variety of cellular activities
A9237_10465	SM00563	Phosphate acyltransferases
A9237_10510	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_10560	SM00495	Chitin-binding domain type 3
A9237_10590	SM00354	helix_turn _helix lactose operon repressor
A9237_10595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_10675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_10675	SM01049	A9237_10675
A9237_10725	SM00478	endonuclease III
A9237_10725	SM00525	A9237_10725
A9237_10745	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_10760	SM01152	A9237_10760
A9237_10790	SM00732	Likely ribonuclease with RNase H fold.
A9237_10815	SM00731	SprT homologues.
A9237_10830	SM00861	Transketolase, pyrimidine binding domain
A9237_10840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9237_10970	SM00838	Elongation factor G C-terminus
A9237_10980	SM00358	Double-stranded RNA binding motif
A9237_10980	SM00535	Ribonuclease III family
A9237_11005	SM00073	Histidine Phosphotransfer domain
A9237_11005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_11005	SM00387	Histidine kinase-like ATPases
A9237_11005	SM00388	His Kinase A (phosphoacceptor) domain
A9237_11005	SM00448	cheY-homologous receiver domain
A9237_11020	SM00954	Region found in RelA / SpoT proteins
A9237_11035	SM01192	A9237_11035
A9237_11035	SM01193	A9237_11035
A9237_11070	SM00257	Lysin motif
A9237_11080	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9237_11080	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9237_11090	SM00382	ATPases associated with a variety of cellular activities
A9237_11100	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9237_11190	SM00421	helix_turn_helix, Lux Regulon
A9237_11210	SM00829	Enoylreductase
A9237_11240	SM01091	Transporter associated domain
A9237_11250	SM00382	ATPases associated with a variety of cellular activities
A9237_11250	SM00962	SRP54-type protein, GTPase domain
A9237_11250	SM00963	SRP54-type protein, helical bundle domain
A9237_11320	SM00644	A9237_11320
A9237_11325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_11325	SM00895	A9237_11325
A9237_11360	SM00947	Carbonic anhydrase
A9237_11370	SM00382	ATPases associated with a variety of cellular activities
A9237_11420	SM00487	DEAD-like helicases superfamily
A9237_11420	SM00490	helicase superfamily c-terminal domain
A9237_11420	SM00847	Helicase associated domain (HA2)  Add an annotation
A9237_11445	SM00938	Nitrogen regulatory protein P-II
A9237_11465	SM00382	ATPases associated with a variety of cellular activities
A9237_11475	SM01068	Putative carbohydrate binding domain
A9237_11495	SM00382	ATPases associated with a variety of cellular activities
A9237_11500	SM00382	ATPases associated with a variety of cellular activities
A9237_11520	SM00091	PAS domain
A9237_11520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_11520	SM00387	Histidine kinase-like ATPases
A9237_11520	SM00388	His Kinase A (phosphoacceptor) domain
A9237_11520	SM00448	cheY-homologous receiver domain
A9237_11565	SM00363	S4 RNA-binding domain
A9237_11590	SM01103	A9237_11590
A9237_11600	SM00382	ATPases associated with a variety of cellular activities
A9237_11635	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_11655	SM01387	A9237_11655
A9237_11660	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_11660	SM00322	K homology RNA-binding domain
A9237_11665	SM00028	Tetratricopeptide repeats
A9237_11670	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_11690	SM00052	Putative diguanylate phosphodiesterase
A9237_11690	SM00091	PAS domain
A9237_11690	SM00267	diguanylate cyclase
A9237_11720	SM00267	diguanylate cyclase
A9237_11740	SM01133	A9237_11740
A9237_11745	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A9237_11775	SM00382	ATPases associated with a variety of cellular activities
A9237_11780	SM00838	Elongation factor G C-terminus
A9237_11780	SM00889	Elongation factor G, domain IV
A9237_11815	SM00421	helix_turn_helix, Lux Regulon
A9237_11880	SM00028	Tetratricopeptide repeats
A9237_11935	SM01038	Beta galactosidase small chain
A9237_11940	SM00354	helix_turn _helix lactose operon repressor
A9237_11970	SM00354	helix_turn _helix lactose operon repressor
A9237_12060	SM01120	A9237_12060
A9237_12070	SM00382	ATPases associated with a variety of cellular activities
A9237_12095	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9237_12095	SM01134	A9237_12095
A9237_12190	SM00925	MltA specific insert domain
A9237_12230	SM00464	Found in ATP-dependent protease La (LON)
A9237_12285	SM00900	A9237_12285
A9237_12315	SM00267	diguanylate cyclase
A9237_12315	SM00448	cheY-homologous receiver domain
A9237_12325	SM00487	DEAD-like helicases superfamily
A9237_12325	SM00490	helicase superfamily c-terminal domain
A9237_12340	SM00495	Chitin-binding domain type 3
A9237_12340	SM00636	A9237_12340
A9237_12440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_12485	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9237_12495	SM00935	Outer membrane protein (OmpH-like)
A9237_12525	SM00481	DNA polymerase alpha chain like domain
A9237_12535	SM00977	TilS substrate C-terminal domain
A9237_12545	SM00938	Nitrogen regulatory protein P-II
A9237_12560	SM00257	Lysin motif
A9237_12565	SM00849	Metallo-beta-lactamase superfamily
A9237_12580	SM00479	A9237_12580
A9237_12685	SM01130	A9237_12685
A9237_12745	SM00342	helix_turn_helix, arabinose operon control protein
A9237_12805	SM00382	ATPases associated with a variety of cellular activities
A9237_12810	SM00387	Histidine kinase-like ATPases
A9237_12810	SM00388	His Kinase A (phosphoacceptor) domain
A9237_12815	SM00382	ATPases associated with a variety of cellular activities
A9237_12815	SM00448	cheY-homologous receiver domain
A9237_12840	SM00382	ATPases associated with a variety of cellular activities
A9237_12905	SM00382	ATPases associated with a variety of cellular activities
A9237_12905	SM00962	SRP54-type protein, GTPase domain
A9237_12920	SM00448	cheY-homologous receiver domain
A9237_12930	SM00073	Histidine Phosphotransfer domain
A9237_12930	SM00260	Two component signalling adaptor domain
A9237_12930	SM00387	Histidine kinase-like ATPases
A9237_12930	SM01231	A9237_12930
A9237_12935	SM00448	cheY-homologous receiver domain
A9237_12945	SM00260	Two component signalling adaptor domain
A9237_12950	SM00260	Two component signalling adaptor domain
A9237_12960	SM00382	ATPases associated with a variety of cellular activities
A9237_13055	SM00855	Phosphoglycerate mutase family
A9237_13060	SM00463	Small MutS-related domain
A9237_13100	SM00825	Beta-ketoacyl synthase
A9237_13115	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9237_13165	SM00448	cheY-homologous receiver domain
A9237_13180	SM00382	ATPases associated with a variety of cellular activities
A9237_13190	SM00493	A9237_13190
A9237_13270	SM00098	Alkaline phosphatase homologues
A9237_13295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_13295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_13315	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9237_13335	SM00870	A9237_13335
A9237_13355	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9237_13355	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9237_13355	SM00493	A9237_13355
A9237_13420	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9237_13505	SM00479	A9237_13505
A9237_13525	SM00478	endonuclease III
A9237_13525	SM00525	A9237_13525
A9237_13535	SM00900	A9237_13535
A9237_13570	SM00487	DEAD-like helicases superfamily
A9237_13570	SM00490	helicase superfamily c-terminal domain
A9237_13575	SM00382	ATPases associated with a variety of cellular activities
A9237_13575	SM00448	cheY-homologous receiver domain
A9237_13590	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_13595	SM00852	Probable molybdopterin binding domain
A9237_13630	SM00382	ATPases associated with a variety of cellular activities
A9237_13635	SM00382	ATPases associated with a variety of cellular activities
A9237_13685	SM00382	ATPases associated with a variety of cellular activities
A9237_13690	SM00642	Alpha-amylase domain
A9237_13695	SM00267	diguanylate cyclase
A9237_13720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_13755	SM00226	Low molecular weight phosphatase family
A9237_13770	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_13780	SM00363	S4 RNA-binding domain
A9237_13810	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9237_13815	SM00822	A9237_13815
A9237_13825	SM00825	Beta-ketoacyl synthase
A9237_13890	SM00260	Two component signalling adaptor domain
A9237_13890	SM00448	cheY-homologous receiver domain
A9237_13895	SM00481	DNA polymerase alpha chain like domain
A9237_13910	SM00822	A9237_13910
A9237_13930	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_13935	SM00411	bacterial (prokaryotic) histone like domain
A9237_13945	SM00028	Tetratricopeptide repeats
A9237_13950	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9237_14040	SM00354	helix_turn _helix lactose operon repressor
A9237_14055	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_14070	SM00387	Histidine kinase-like ATPases
A9237_14070	SM00388	His Kinase A (phosphoacceptor) domain
A9237_14075	SM00421	helix_turn_helix, Lux Regulon
A9237_14075	SM00448	cheY-homologous receiver domain
A9237_14080	SM01038	Beta galactosidase small chain
A9237_14110	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_14110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_14220	SM00382	ATPases associated with a variety of cellular activities
A9237_14225	SM00354	helix_turn _helix lactose operon repressor
A9237_14230	SM00642	Alpha-amylase domain
A9237_14240	SM00479	A9237_14240
A9237_14320	SM00220	Serine/Threonine protein kinases, catalytic domain
A9237_14320	SM00364	Leucine-rich repeats, bacterial type
A9237_14320	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A9237_14325	SM00387	Histidine kinase-like ATPases
A9237_14325	SM00388	His Kinase A (phosphoacceptor) domain
A9237_14330	SM00448	cheY-homologous receiver domain
A9237_14330	SM00862	Transcriptional regulatory protein, C terminal
A9237_14350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_14350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_14395	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_14400	SM00052	Putative diguanylate phosphodiesterase
A9237_14400	SM00091	PAS domain
A9237_14450	SM00387	Histidine kinase-like ATPases
A9237_14450	SM00388	His Kinase A (phosphoacceptor) domain
A9237_14450	SM00448	cheY-homologous receiver domain
A9237_14500	SM00481	DNA polymerase alpha chain like domain
A9237_14515	SM00363	S4 RNA-binding domain
A9237_14525	SM00841	Elongation factor P, C-terminal
A9237_14525	SM01185	A9237_14525
A9237_14535	SM00486	DNA polymerase type-B family
A9237_14540	SM00421	helix_turn_helix, Lux Regulon
A9237_14540	SM00448	cheY-homologous receiver domain
A9237_14545	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9237_14545	SM00465	GIY-YIG type nucleases (URI domain)
A9237_14605	SM00852	Probable molybdopterin binding domain
A9237_14635	SM00434	DNA Topoisomerase IV
A9237_14725	SM00849	Metallo-beta-lactamase superfamily
A9237_14755	SM00387	Histidine kinase-like ATPases
A9237_14755	SM01049	A9237_14755
A9237_14760	SM00421	helix_turn_helix, Lux Regulon
A9237_14760	SM00448	cheY-homologous receiver domain
A9237_14765	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_14775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_14775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_14780	SM00479	A9237_14780
A9237_14785	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_14785	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_14800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_14815	SM00354	helix_turn _helix lactose operon repressor
A9237_14830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_14850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_14850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_14860	SM00421	helix_turn_helix, Lux Regulon
A9237_14870	SM00052	Putative diguanylate phosphodiesterase
A9237_14895	SM00387	Histidine kinase-like ATPases
A9237_14895	SM00388	His Kinase A (phosphoacceptor) domain
A9237_14895	SM00448	cheY-homologous receiver domain
A9237_14925	SM00091	PAS domain
A9237_14925	SM00382	ATPases associated with a variety of cellular activities
A9237_15560	SM00354	helix_turn _helix lactose operon repressor
A9237_15610	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_15610	SM00387	Histidine kinase-like ATPases
A9237_15615	SM00448	cheY-homologous receiver domain
A9237_15620	SM00052	Putative diguanylate phosphodiesterase
A9237_15620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_15620	SM00091	PAS domain
A9237_15620	SM00267	diguanylate cyclase
A9237_15625	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_15655	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A9237_15660	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_15670	SM00267	diguanylate cyclase
A9237_15705	SM00382	ATPases associated with a variety of cellular activities
A9237_15710	SM00382	ATPases associated with a variety of cellular activities
A9237_15765	SM00267	diguanylate cyclase
A9237_15765	SM01079	A9237_15765
A9237_15770	SM00479	A9237_15770
A9237_15800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_15830	SM00382	ATPases associated with a variety of cellular activities
A9237_15830	SM00487	DEAD-like helicases superfamily
A9237_15830	SM00490	helicase superfamily c-terminal domain
A9237_15830	SM00847	Helicase associated domain (HA2)  Add an annotation
A9237_15850	SM00245	tail specific protease
A9237_15855	SM00028	Tetratricopeptide repeats
A9237_15930	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_15980	SM00999	Aerolysin toxin
A9237_15990	SM00862	Transcriptional regulatory protein, C terminal
A9237_16010	SM00342	helix_turn_helix, arabinose operon control protein
A9237_16065	SM00100	Cyclic nucleotide-monophosphate binding domain
A9237_16065	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_16070	SM00479	A9237_16070
A9237_16145	SM00342	helix_turn_helix, arabinose operon control protein
A9237_16175	SM00635	Bacterial Ig-like domain 2
A9237_16215	SM00091	PAS domain
A9237_16215	SM00387	Histidine kinase-like ATPases
A9237_16220	SM00448	cheY-homologous receiver domain
A9237_16235	SM01350	A9237_16235
A9237_16330	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_16330	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_16335	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_16335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_16340	SM00220	Serine/Threonine protein kinases, catalytic domain
A9237_16375	SM00382	ATPases associated with a variety of cellular activities
A9237_16375	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_16440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_16440	SM00895	A9237_16440
A9237_16475	SM00020	Trypsin-like serine protease
A9237_16475	SM00495	Chitin-binding domain type 3
A9237_16500	SM00028	Tetratricopeptide repeats
A9237_16500	SM00267	diguanylate cyclase
A9237_16520	SM00736	Dystroglycan-type cadherin-like domains.
A9237_16555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_16580	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_16620	SM00822	A9237_16620
A9237_16640	SM00388	His Kinase A (phosphoacceptor) domain
A9237_16650	SM00014	Acid phosphatase homologues
A9237_16680	SM00382	ATPases associated with a variety of cellular activities
A9237_16775	SM00448	cheY-homologous receiver domain
A9237_16775	SM00862	Transcriptional regulatory protein, C terminal
A9237_16780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_16780	SM00387	Histidine kinase-like ATPases
A9237_16780	SM00388	His Kinase A (phosphoacceptor) domain
A9237_16855	SM00382	ATPases associated with a variety of cellular activities
A9237_16895	SM00849	Metallo-beta-lactamase superfamily
A9237_16940	SM00342	helix_turn_helix, arabinose operon control protein
A9237_16960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_16960	SM00387	Histidine kinase-like ATPases
A9237_16965	SM00382	ATPases associated with a variety of cellular activities
A9237_16965	SM00448	cheY-homologous receiver domain
A9237_16970	SM00267	diguanylate cyclase
A9237_17035	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_17050	SM00267	diguanylate cyclase
A9237_17050	SM01079	A9237_17050
A9237_17055	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_17065	SM00267	diguanylate cyclase
A9237_17100	SM01266	A9237_17100
A9237_17130	SM00382	ATPases associated with a variety of cellular activities
A9237_17145	SM00796	Allophanate hydrolase subunit 1
A9237_17145	SM00797	Allophanate hydrolase subunit 2
A9237_17145	SM00878	Biotin carboxylase C-terminal domain
A9237_17215	SM00640	Glycosyl hydrolases family 32
A9237_17255	SM00354	helix_turn _helix lactose operon repressor
A9237_17285	SM00382	ATPases associated with a variety of cellular activities
A9237_17295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_17295	SM00866	A9237_17295
A9237_17325	SM00631	A9237_17325
A9237_17405	SM00858	A9237_17405
A9237_17480	SM01240	A9237_17480
A9237_17510	SM00862	Transcriptional regulatory protein, C terminal
A9237_17550	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_17670	SM00382	ATPases associated with a variety of cellular activities
A9237_17695	SM00382	ATPases associated with a variety of cellular activities
A9237_17705	SM00052	Putative diguanylate phosphodiesterase
A9237_17710	SM00020	Trypsin-like serine protease
A9237_17770	SM00481	DNA polymerase alpha chain like domain
A9237_17815	SM00448	cheY-homologous receiver domain
A9237_17815	SM00862	Transcriptional regulatory protein, C terminal
A9237_17820	SM00388	His Kinase A (phosphoacceptor) domain
A9237_17830	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_17835	SM00052	Putative diguanylate phosphodiesterase
A9237_17835	SM00267	diguanylate cyclase
A9237_17845	SM00829	Enoylreductase
A9237_17855	SM01057	Eukaryotic-type carbonic anhydrase
A9237_17895	SM00382	ATPases associated with a variety of cellular activities
A9237_17910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_17910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_17930	SM00587	ZnF_C4 abd HLH domain containing kinases domain
A9237_17960	SM00226	Low molecular weight phosphatase family
A9237_17960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_17985	SM00382	ATPases associated with a variety of cellular activities
A9237_18010	SM00267	diguanylate cyclase
A9237_18015	SM00028	Tetratricopeptide repeats
A9237_18035	SM00422	helix_turn_helix, mercury resistance
A9237_18045	SM00257	Lysin motif
A9237_18055	SM00175	Rab subfamily of small GTPases
A9237_18090	SM00487	DEAD-like helicases superfamily
A9237_18090	SM00490	helicase superfamily c-terminal domain
A9237_18120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_18120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_18140	SM00382	ATPases associated with a variety of cellular activities
A9237_18145	SM00267	diguanylate cyclase
A9237_18155	SM00028	Tetratricopeptide repeats
A9237_18155	SM00327	von Willebrand factor (vWF) type A domain
A9237_18160	SM00327	von Willebrand factor (vWF) type A domain
A9237_18190	SM00419	helix_turn_helix, cAMP Regulatory protein
A9237_18195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_18195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_18205	SM00421	helix_turn_helix, Lux Regulon
A9237_18210	SM00421	helix_turn_helix, Lux Regulon
A9237_18220	SM00382	ATPases associated with a variety of cellular activities
A9237_18230	SM01266	A9237_18230
A9237_18235	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_18235	SM00448	cheY-homologous receiver domain
A9237_18240	SM00387	Histidine kinase-like ATPases
A9237_18240	SM00388	His Kinase A (phosphoacceptor) domain
A9237_18260	SM00382	ATPases associated with a variety of cellular activities
A9237_18310	SM00052	Putative diguanylate phosphodiesterase
A9237_18315	SM00052	Putative diguanylate phosphodiesterase
A9237_18325	SM00495	Chitin-binding domain type 3
A9237_18350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9237_18350	SM00382	ATPases associated with a variety of cellular activities
A9237_18355	SM00849	Metallo-beta-lactamase superfamily
A9237_18405	SM00342	helix_turn_helix, arabinose operon control protein
A9237_18440	SM01060	A9237_18440
A9237_18450	SM00829	Enoylreductase
A9237_18460	SM01022	A9237_18460
A9237_18525	SM00382	ATPases associated with a variety of cellular activities
A9237_18565	SM00342	helix_turn_helix, arabinose operon control protein
A9237_18640	SM00382	ATPases associated with a variety of cellular activities
A9237_18670	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_18695	SM00260	Two component signalling adaptor domain
A9237_18695	SM00448	cheY-homologous receiver domain
A9237_18705	SM00642	Alpha-amylase domain
A9237_18710	SM00829	Enoylreductase
A9237_18720	SM00822	A9237_18720
A9237_18725	SM00342	helix_turn_helix, arabinose operon control protein
A9237_18750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_18825	SM00342	helix_turn_helix, arabinose operon control protein
A9237_18855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_18855	SM00387	Histidine kinase-like ATPases
A9237_18855	SM00388	His Kinase A (phosphoacceptor) domain
A9237_18860	SM00448	cheY-homologous receiver domain
A9237_18860	SM00862	Transcriptional regulatory protein, C terminal
A9237_18865	SM00764	Citrate lyase ligase C-terminal domain
A9237_18875	SM01065	Starch binding domain
A9237_18915	SM00563	Phosphate acyltransferases
A9237_18925	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_18930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_18955	SM00924	MgtE intracellular N domain
A9237_18975	SM00342	helix_turn_helix, arabinose operon control protein
A9237_18990	SM00448	cheY-homologous receiver domain
A9237_18990	SM00862	Transcriptional regulatory protein, C terminal
A9237_18995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_18995	SM00387	Histidine kinase-like ATPases
A9237_18995	SM00388	His Kinase A (phosphoacceptor) domain
A9237_19005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_19030	SM00344	helix_turn_helix ASNC type
A9237_19060	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9237_19065	SM00387	Histidine kinase-like ATPases
A9237_19065	SM00388	His Kinase A (phosphoacceptor) domain
A9237_19065	SM00448	cheY-homologous receiver domain
A9237_19095	SM00465	GIY-YIG type nucleases (URI domain)
A9237_19105	SM00387	Histidine kinase-like ATPases
A9237_19105	SM00388	His Kinase A (phosphoacceptor) domain
A9237_19105	SM00448	cheY-homologous receiver domain
A9237_19120	SM00344	helix_turn_helix ASNC type
A9237_19140	SM00287	Bacterial SH3 domain homologues
A9237_19170	SM00822	A9237_19170
A9237_19205	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_19220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_19220	SM00387	Histidine kinase-like ATPases
A9237_19225	SM00421	helix_turn_helix, Lux Regulon
A9237_19225	SM00448	cheY-homologous receiver domain
A9237_19260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_19260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_19300	SM01322	A9237_19300
A9237_19305	SM00357	Cold shock protein domain
A9237_19320	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_19320	SM00267	diguanylate cyclase
A9237_19340	SM00382	ATPases associated with a variety of cellular activities
A9237_19360	SM00382	ATPases associated with a variety of cellular activities
A9237_19365	SM00382	ATPases associated with a variety of cellular activities
A9237_19375	SM00448	cheY-homologous receiver domain
A9237_19390	SM00710	Parallel beta-helix repeats
A9237_19400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_19400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_19530	SM00267	diguanylate cyclase
A9237_19535	SM00487	DEAD-like helicases superfamily
A9237_19535	SM00490	helicase superfamily c-terminal domain
A9237_19555	SM00052	Putative diguanylate phosphodiesterase
A9237_19560	SM00382	ATPases associated with a variety of cellular activities
A9237_19585	SM00342	helix_turn_helix, arabinose operon control protein
A9237_19590	SM00316	Ribosomal protein S1-like RNA-binding domain
A9237_19590	SM00357	Cold shock protein domain
A9237_19590	SM00955	A9237_19590
A9237_19595	SM00487	DEAD-like helicases superfamily
A9237_19595	SM00490	helicase superfamily c-terminal domain
A9237_19655	SM00422	helix_turn_helix, mercury resistance
A9237_19690	SM00822	A9237_19690
A9237_19765	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A9237_19815	SM00382	ATPases associated with a variety of cellular activities
A9237_19820	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_19820	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9237_19835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_19835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_19860	SM00900	A9237_19860
A9237_19890	SM00893	Electron transfer flavoprotein domain
A9237_19895	SM00893	Electron transfer flavoprotein domain
A9237_19905	SM00861	Transketolase, pyrimidine binding domain
A9237_19960	SM00448	cheY-homologous receiver domain
A9237_19960	SM00862	Transcriptional regulatory protein, C terminal
A9237_19965	SM00388	His Kinase A (phosphoacceptor) domain
A9237_19975	SM00871	Bacterial transcription activator, effector binding domain
A9237_19980	SM00098	Alkaline phosphatase homologues
A9237_20005	SM00028	Tetratricopeptide repeats
A9237_20005	SM00267	diguanylate cyclase
A9237_20015	SM00052	Putative diguanylate phosphodiesterase
A9237_20025	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_20045	SM01012	A9237_20045
A9237_20065	SM00382	ATPases associated with a variety of cellular activities
A9237_20100	SM00331	Sigma factor PP2C-like phosphatases
A9237_20100	SM00448	cheY-homologous receiver domain
A9237_20115	SM00052	Putative diguanylate phosphodiesterase
A9237_20115	SM00267	diguanylate cyclase
A9237_20125	SM00448	cheY-homologous receiver domain
A9237_20125	SM00862	Transcriptional regulatory protein, C terminal
A9237_20130	SM00388	His Kinase A (phosphoacceptor) domain
A9237_20140	SM00448	cheY-homologous receiver domain
A9237_20140	SM00862	Transcriptional regulatory protein, C terminal
A9237_20175	SM00862	Transcriptional regulatory protein, C terminal
A9237_20200	SM00346	helix_turn_helix isocitrate lyase regulation
A9237_20280	SM00342	helix_turn_helix, arabinose operon control protein
A9237_20290	SM00636	A9237_20290
A9237_20300	SM00867	YceI-like domain 
A9237_20315	SM00342	helix_turn_helix, arabinose operon control protein
A9237_20350	SM00342	helix_turn_helix, arabinose operon control protein
A9237_20360	SM00829	Enoylreductase
A9237_20380	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9237_20385	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9237_20415	SM00342	helix_turn_helix, arabinose operon control protein
A9237_20430	SM00014	Acid phosphatase homologues
A9237_20505	SM00382	ATPases associated with a variety of cellular activities
A9237_20560	SM00248	ankyrin repeats
A9237_20575	SM00487	DEAD-like helicases superfamily
A9237_20575	SM00490	helicase superfamily c-terminal domain
A9237_20595	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_20635	SM00862	Transcriptional regulatory protein, C terminal
A9237_20660	SM00354	helix_turn _helix lactose operon repressor
A9237_20675	SM00052	Putative diguanylate phosphodiesterase
A9237_20685	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_20685	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9237_20695	SM00382	ATPases associated with a variety of cellular activities
A9237_20710	SM00342	helix_turn_helix, arabinose operon control protein
A9237_20715	SM00495	Chitin-binding domain type 3
A9237_20715	SM00636	A9237_20715
A9237_20745	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_20760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_20770	SM00487	DEAD-like helicases superfamily
A9237_20770	SM00490	helicase superfamily c-terminal domain
A9237_20775	SM00052	Putative diguanylate phosphodiesterase
A9237_20795	SM00867	YceI-like domain 
A9237_20800	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9237_20850	SM00782	PhnA Zinc-Ribbon
A9237_20915	SM00271	DnaJ molecular chaperone homology domain
A9237_20925	SM00052	Putative diguanylate phosphodiesterase
A9237_20925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9237_20925	SM00267	diguanylate cyclase
A9237_20940	SM00382	ATPases associated with a variety of cellular activities
A9237_20955	SM00797	Allophanate hydrolase subunit 2
A9237_20960	SM00796	Allophanate hydrolase subunit 1
A9237_20970	SM00091	PAS domain
A9237_20970	SM00267	diguanylate cyclase
A9237_20970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_20990	SM00881	CoA binding domain
A9237_21150	SM00448	cheY-homologous receiver domain
A9237_21150	SM00862	Transcriptional regulatory protein, C terminal
A9237_21155	SM00387	Histidine kinase-like ATPases
A9237_21155	SM00388	His Kinase A (phosphoacceptor) domain
A9237_21165	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A9237_21165	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A9237_21180	SM00267	diguanylate cyclase
A9237_21190	SM00267	diguanylate cyclase
A9237_21190	SM00448	cheY-homologous receiver domain
A9237_21200	SM00382	ATPases associated with a variety of cellular activities
A9237_21240	SM00342	helix_turn_helix, arabinose operon control protein
A9237_21275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_21280	SM00450	Rhodanese Homology Domain
A9237_21305	SM00342	helix_turn_helix, arabinose operon control protein
A9237_21335	SM00421	helix_turn_helix, Lux Regulon
A9237_21335	SM00448	cheY-homologous receiver domain
A9237_21340	SM00387	Histidine kinase-like ATPases
A9237_21375	SM00342	helix_turn_helix, arabinose operon control protein
A9237_21415	SM00342	helix_turn_helix, arabinose operon control protein
A9237_21480	SM00267	diguanylate cyclase
A9237_21525	SM00880	A9237_21525
A9237_21540	SM00642	Alpha-amylase domain
A9237_21585	SM00382	ATPases associated with a variety of cellular activities
A9237_21620	SM00342	helix_turn_helix, arabinose operon control protein
A9237_21655	SM00495	Chitin-binding domain type 3
A9237_21655	SM00636	A9237_21655
A9237_21710	SM00382	ATPases associated with a variety of cellular activities
A9237_21710	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_21755	SM00331	Sigma factor PP2C-like phosphatases
A9237_21755	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9237_21785	SM00240	Forkhead associated domain
A9237_21790	SM00220	Serine/Threonine protein kinases, catalytic domain
A9237_21795	SM00448	cheY-homologous receiver domain
A9237_21840	SM00953	A9237_21840
A9237_21850	SM00704	CDGSH-type zinc finger. Function unknown.
A9237_21860	SM00849	Metallo-beta-lactamase superfamily
A9237_21870	SM00710	Parallel beta-helix repeats
A9237_21915	SM00014	Acid phosphatase homologues
A9237_21945	SM00260	Two component signalling adaptor domain
A9237_21945	SM00448	cheY-homologous receiver domain
A9237_21955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_21955	SM01358	A9237_21955
A9237_21960	SM00421	helix_turn_helix, Lux Regulon
A9237_21960	SM00448	cheY-homologous receiver domain
A9237_21970	SM00267	diguanylate cyclase
A9237_21975	SM00421	helix_turn_helix, Lux Regulon
A9237_21975	SM00448	cheY-homologous receiver domain
A9237_21980	SM00052	Putative diguanylate phosphodiesterase
A9237_21980	SM00448	cheY-homologous receiver domain
A9237_21985	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_21985	SM00387	Histidine kinase-like ATPases
A9237_21985	SM00388	His Kinase A (phosphoacceptor) domain
A9237_21985	SM00448	cheY-homologous receiver domain
A9237_21990	SM00267	diguanylate cyclase
A9237_21990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_22050	SM00240	Forkhead associated domain
A9237_22070	SM00344	helix_turn_helix ASNC type
A9237_22105	SM00220	Serine/Threonine protein kinases, catalytic domain
A9237_22140	SM00382	ATPases associated with a variety of cellular activities
A9237_22140	SM01086	C-terminal, D2-small domain, of ClpB protein
A9237_22145	SM00382	ATPases associated with a variety of cellular activities
A9237_22165	SM00564	beta-propeller repeat
A9237_22185	SM00387	Histidine kinase-like ATPases
A9237_22185	SM00448	cheY-homologous receiver domain
A9237_22230	SM00990	A9237_22230
A9237_22235	SM00028	Tetratricopeptide repeats
A9237_22265	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9237_22285	SM00382	ATPases associated with a variety of cellular activities
A9237_22335	SM00327	von Willebrand factor (vWF) type A domain
A9237_22370	SM00028	Tetratricopeptide repeats
A9237_22390	SM00448	cheY-homologous receiver domain
A9237_22390	SM00862	Transcriptional regulatory protein, C terminal
A9237_22395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_22395	SM00387	Histidine kinase-like ATPases
A9237_22395	SM00388	His Kinase A (phosphoacceptor) domain
A9237_22415	SM00073	Histidine Phosphotransfer domain
A9237_22415	SM00387	Histidine kinase-like ATPases
A9237_22415	SM00388	His Kinase A (phosphoacceptor) domain
A9237_22415	SM00448	cheY-homologous receiver domain
A9237_22425	SM00851	MGS-like domain
A9237_22475	SM00342	helix_turn_helix, arabinose operon control protein
A9237_22480	SM00422	helix_turn_helix, mercury resistance
A9237_22485	SM00382	ATPases associated with a variety of cellular activities
A9237_22530	SM00354	helix_turn _helix lactose operon repressor
A9237_22550	SM00382	ATPases associated with a variety of cellular activities
A9237_22560	SM00052	Putative diguanylate phosphodiesterase
A9237_22560	SM00267	diguanylate cyclase
A9237_22620	SM00862	Transcriptional regulatory protein, C terminal
A9237_22625	SM00191	Integrin alpha (beta-propellor repeats).
A9237_22630	SM00448	cheY-homologous receiver domain
A9237_22630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9237_22635	SM00387	Histidine kinase-like ATPases
A9237_22635	SM00388	His Kinase A (phosphoacceptor) domain
A9237_22635	SM00448	cheY-homologous receiver domain
A9237_22635	SM01358	A9237_22635
A9237_22675	SM00387	Histidine kinase-like ATPases
A9237_22675	SM00388	His Kinase A (phosphoacceptor) domain
A9237_22675	SM00448	cheY-homologous receiver domain
A9237_22685	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_22685	SM00387	Histidine kinase-like ATPases
A9237_22685	SM00388	His Kinase A (phosphoacceptor) domain
A9237_22685	SM00448	cheY-homologous receiver domain
A9237_22690	SM00052	Putative diguanylate phosphodiesterase
A9237_22690	SM00448	cheY-homologous receiver domain
A9237_22695	SM00448	cheY-homologous receiver domain
A9237_22720	SM00244	prohibitin homologues
A9237_22795	SM00155	Phospholipase D. Active site motifs.
A9237_22815	SM00382	ATPases associated with a variety of cellular activities
A9237_22855	SM00342	helix_turn_helix, arabinose operon control protein
A9237_22860	SM00091	PAS domain
A9237_22860	SM00267	diguanylate cyclase
A9237_22900	SM01240	A9237_22900
A9237_22915	SM00448	cheY-homologous receiver domain
A9237_22955	SM00852	Probable molybdopterin binding domain
A9237_22980	SM00450	Rhodanese Homology Domain
A9237_22985	SM00052	Putative diguanylate phosphodiesterase
A9237_22985	SM00267	diguanylate cyclase
A9237_22990	SM00636	A9237_22990
A9237_23010	SM00861	Transketolase, pyrimidine binding domain
A9237_23015	SM00091	PAS domain
A9237_23015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_23095	SM00342	helix_turn_helix, arabinose operon control protein
A9237_23170	SM00342	helix_turn_helix, arabinose operon control protein
A9237_23170	SM00871	Bacterial transcription activator, effector binding domain
A9237_23180	SM00382	ATPases associated with a variety of cellular activities
A9237_23185	SM00052	Putative diguanylate phosphodiesterase
A9237_23185	SM00267	diguanylate cyclase
A9237_23215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_23215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_23235	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_23245	SM00481	DNA polymerase alpha chain like domain
A9237_23275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_23275	SM00866	A9237_23275
A9237_23285	SM00872	Alpha mannosidase, middle domain
A9237_23330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9237_23345	SM00342	helix_turn_helix, arabinose operon control protein
A9237_23395	SM01119	A9237_23395
A9237_23405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_23405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_23415	SM00382	ATPases associated with a variety of cellular activities
A9237_23435	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9237_23495	SM00829	Enoylreductase
A9237_23505	SM00422	helix_turn_helix, mercury resistance
A9237_23530	SM01235	A9237_23530
A9237_23560	SM00382	ATPases associated with a variety of cellular activities
A9237_23595	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9237_23595	SM01134	A9237_23595
A9237_23620	SM00382	ATPases associated with a variety of cellular activities
A9237_23640	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_23695	SM00357	Cold shock protein domain
A9237_23715	SM00267	diguanylate cyclase
A9237_23750	SM00267	diguanylate cyclase
A9237_23755	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9237_23795	SM00822	A9237_23795
A9237_23840	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9237_23850	SM00342	helix_turn_helix, arabinose operon control protein
A9237_23850	SM00871	Bacterial transcription activator, effector binding domain
A9237_23885	SM00487	DEAD-like helicases superfamily
A9237_23885	SM00490	helicase superfamily c-terminal domain
A9237_23965	SM00829	Enoylreductase
A9237_23985	SM00788	Adenylosuccinate synthetase
A9237_23995	SM00052	Putative diguanylate phosphodiesterase
A9237_24000	SM00870	A9237_24000
A9237_24020	SM00421	helix_turn_helix, Lux Regulon
A9237_24030	SM00886	Stress responsive A/B Barrel Domain
A9237_24055	SM00342	helix_turn_helix, arabinose operon control protein
A9237_24115	SM00267	diguanylate cyclase
A9237_24120	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_24125	SM00421	helix_turn_helix, Lux Regulon
A9237_24190	SM00155	Phospholipase D. Active site motifs.
A9237_24205	SM01022	A9237_24205
A9237_24210	SM00028	Tetratricopeptide repeats
A9237_24220	SM00422	helix_turn_helix, mercury resistance
A9237_24235	SM00640	Glycosyl hydrolases family 32
A9237_24245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_24245	SM00866	A9237_24245
A9237_24260	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9237_24270	SM00838	Elongation factor G C-terminus
A9237_24270	SM00889	Elongation factor G, domain IV
A9237_24285	SM00052	Putative diguanylate phosphodiesterase
A9237_24285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9237_24285	SM00091	PAS domain
A9237_24285	SM00267	diguanylate cyclase
A9237_24325	SM00382	ATPases associated with a variety of cellular activities
A9237_24360	SM00062	Bacterial periplasmic substrate-binding proteins
A9237_24405	SM00248	ankyrin repeats
A9237_24410	SM01060	A9237_24410
A9237_24445	SM00354	helix_turn _helix lactose operon repressor
A9237_24450	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9237_24450	SM01134	A9237_24450
A9237_24535	SM00450	Rhodanese Homology Domain
A9237_24570	SM00382	ATPases associated with a variety of cellular activities
A9237_24595	SM00382	ATPases associated with a variety of cellular activities
A9237_24690	SM00342	helix_turn_helix, arabinose operon control protein
A9237_24695	SM00342	helix_turn_helix, arabinose operon control protein
A9237_24730	SM00387	Histidine kinase-like ATPases
A9237_24730	SM00388	His Kinase A (phosphoacceptor) domain
A9237_24735	SM00448	cheY-homologous receiver domain
A9237_24735	SM00862	Transcriptional regulatory protein, C terminal
A9237_24750	SM01192	A9237_24750
A9237_24750	SM01193	A9237_24750
A9237_24870	SM00342	helix_turn_helix, arabinose operon control protein
A9237_24875	SM00642	Alpha-amylase domain
A9237_24880	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9237_24910	SM00450	Rhodanese Homology Domain
A9237_24935	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
A9237_24940	SM00903	Flavin reductase like domain
A9237_24970	SM00226	Low molecular weight phosphatase family
A9237_25060	SM00642	Alpha-amylase domain
A9237_25070	SM00642	Alpha-amylase domain
A9237_25090	SM00421	helix_turn_helix, Lux Regulon
A9237_25200	SM00882	Coenzyme A transferase
A9237_25205	SM00882	Coenzyme A transferase
A9237_25220	SM00966	SpoVT / AbrB like domain 
A9237_25240	SM00671	Sel1-like repeats.
A9237_25245	SM00642	Alpha-amylase domain
A9237_25260	SM00642	Alpha-amylase domain
A9237_25280	SM00642	Alpha-amylase domain
A9237_25285	SM00267	diguanylate cyclase
A9237_25320	SM00354	helix_turn _helix lactose operon repressor
A9237_25355	SM00354	helix_turn _helix lactose operon repressor
A9237_25360	SM00857	Resolvase, N terminal domain
A9237_25405	SM00382	ATPases associated with a variety of cellular activities
A9237_25465	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9237_25470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_25470	SM00866	A9237_25470
A9237_25475	SM00642	Alpha-amylase domain
A9237_25480	SM00640	Glycosyl hydrolases family 32
A9237_25490	SM00382	ATPases associated with a variety of cellular activities
A9237_25520	SM00354	helix_turn _helix lactose operon repressor
A9237_25555	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_25580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_25580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_25630	SM00248	ankyrin repeats
A9237_25645	SM00382	ATPases associated with a variety of cellular activities
A9237_25660	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25680	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25685	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25685	SM00871	Bacterial transcription activator, effector binding domain
A9237_25700	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9237_25755	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_25780	SM00829	Enoylreductase
A9237_25790	SM00344	helix_turn_helix ASNC type
A9237_25795	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25825	SM00487	DEAD-like helicases superfamily
A9237_25825	SM00490	helicase superfamily c-terminal domain
A9237_25850	SM00450	Rhodanese Homology Domain
A9237_25865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_25865	SM00895	A9237_25865
A9237_25920	SM00634	Bacterial Ig-like domain (group 1)
A9237_25930	SM00382	ATPases associated with a variety of cellular activities
A9237_25940	SM00344	helix_turn_helix ASNC type
A9237_25950	SM00855	Phosphoglycerate mutase family
A9237_25960	SM00360	RNA recognition motif
A9237_25970	SM00422	helix_turn_helix, mercury resistance
A9237_25990	SM00342	helix_turn_helix, arabinose operon control protein
A9237_25995	SM00421	helix_turn_helix, Lux Regulon
A9237_26005	SM00421	helix_turn_helix, Lux Regulon
A9237_26035	SM00387	Histidine kinase-like ATPases
A9237_26040	SM00448	cheY-homologous receiver domain
A9237_26055	SM00052	Putative diguanylate phosphodiesterase
A9237_26055	SM00267	diguanylate cyclase
A9237_26060	SM00382	ATPases associated with a variety of cellular activities
A9237_26210	SM00470	ParB-like nuclease domain
A9237_26235	SM00382	ATPases associated with a variety of cellular activities
A9237_26240	SM00382	ATPases associated with a variety of cellular activities
A9237_26260	SM00387	Histidine kinase-like ATPases
A9237_26260	SM00388	His Kinase A (phosphoacceptor) domain
A9237_26260	SM00448	cheY-homologous receiver domain
A9237_26305	SM00382	ATPases associated with a variety of cellular activities
A9237_26325	SM00387	Histidine kinase-like ATPases
A9237_26330	SM00448	cheY-homologous receiver domain
A9237_26330	SM00850	LytTr DNA-binding domain
A9237_26345	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9237_26345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9237_26345	SM01049	A9237_26345
A9237_26380	SM00382	ATPases associated with a variety of cellular activities
A9237_26385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9237_26425	SM00530	Helix-turn-helix XRE-family like proteins 
A9237_26435	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9237_26435	SM01134	A9237_26435
A9237_26450	SM01007	Class II Aldolase and Adducin N-terminal domain
A9237_26460	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9237_26515	SM00342	helix_turn_helix, arabinose operon control protein
A9237_26515	SM01009	AlkA N-terminal domain
A9237_26560	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A9237_26560	SM00495	Chitin-binding domain type 3
A9237_26560	SM00636	A9237_26560
A9237_26580	SM00267	diguanylate cyclase
A9237_26590	SM00354	helix_turn _helix lactose operon repressor
A9237_26615	SM00382	ATPases associated with a variety of cellular activities
A9237_26620	SM00354	helix_turn _helix lactose operon repressor
A9237_26635	SM01234	A9237_26635
A9237_26655	SM00267	diguanylate cyclase
A9237_26680	SM00829	Enoylreductase
A9237_26720	SM00344	helix_turn_helix ASNC type
A9237_26725	SM00495	Chitin-binding domain type 3
