RK51_000065	SM00851	MGS-like domain
RK51_000065	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RK51_000070	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RK51_000085	SM00957	SecA DEAD-like domain
RK51_000085	SM00958	SecA preprotein cross-linking domain
RK51_000100	SM00864	Tubulin/FtsZ family, GTPase domain
RK51_000100	SM00865	Tubulin/FtsZ family, C-terminal domain
RK51_000105	SM00842	Cell division protein FtsA
RK51_000195	SM00749	bacterial OsmY and nodulation domain
RK51_000255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_000260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_000265	SM00434	DNA Topoisomerase IV
RK51_000270	SM00387	Histidine kinase-like ATPases
RK51_000270	SM00433	TopoisomeraseII
RK51_000310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_000320	SM00880	RK51_000320
RK51_000320	SM01118	RK51_000320
RK51_000335	SM00287	Bacterial SH3 domain homologues
RK51_000345	SM00382	ATPases associated with a variety of cellular activities
RK51_000365	SM00905	Dihydroneopterin aldolase
RK51_000370	SM01207	RK51_000370
RK51_000395	SM00400	zinc finger
RK51_000395	SM00493	RK51_000395
RK51_000395	SM00766	DNA primase DnaG DnaB-binding
RK51_000420	SM00342	helix_turn_helix, arabinose operon control protein
RK51_000425	SM00052	Putative diguanylate phosphodiesterase
RK51_000480	SM01120	RK51_000480
RK51_000495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_000495	SM00387	Histidine kinase-like ATPases
RK51_000495	SM00388	His Kinase A (phosphoacceptor) domain
RK51_000500	SM00448	cheY-homologous receiver domain
RK51_000500	SM00862	Transcriptional regulatory protein, C terminal
RK51_000515	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_000515	SM01134	RK51_000515
RK51_000530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_000535	SM00267	diguanylate cyclase
RK51_000575	SM00917	LeuA allosteric (dimerisation) domain
RK51_000580	SM01329	RK51_000580
RK51_000600	SM00271	DnaJ molecular chaperone homology domain
RK51_000620	SM00650	Ribosomal RNA adenine dimethylases
RK51_000710	SM00382	ATPases associated with a variety of cellular activities
RK51_000795	SM00382	ATPases associated with a variety of cellular activities
RK51_000855	SM00487	DEAD-like helicases superfamily
RK51_000855	SM00490	helicase superfamily c-terminal domain
RK51_000885	SM00662	RNA polymerases D
RK51_000890	SM00363	S4 RNA-binding domain
RK51_000890	SM01390	RK51_000890
RK51_000955	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RK51_000960	SM01374	RK51_000960
RK51_000980	SM00322	K homology RNA-binding domain
RK51_000995	SM01382	RK51_000995
RK51_000995	SM01383	RK51_000995
RK51_001015	SM01403	RK51_001015
RK51_001030	SM00487	DEAD-like helicases superfamily
RK51_001030	SM00490	helicase superfamily c-terminal domain
RK51_001035	SM00354	helix_turn _helix lactose operon repressor
RK51_001050	SM00382	ATPases associated with a variety of cellular activities
RK51_001050	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_001105	SM00849	Metallo-beta-lactamase superfamily
RK51_001105	SM01027	Beta-Casp domain
RK51_001115	SM00984	UDP binding domain
RK51_001385	SM00672	Putative lipopolysaccharide-modifying enzyme.
RK51_001395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RK51_001395	SM01232	RK51_001395
RK51_001425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_001425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_001425	SM01049	RK51_001425
RK51_001540	SM00257	Lysin motif
RK51_001590	SM00382	ATPases associated with a variety of cellular activities
RK51_001595	SM00382	ATPases associated with a variety of cellular activities
RK51_001650	SM00028	Tetratricopeptide repeats
RK51_001655	SM00072	Guanylate kinase homologues.
RK51_001660	SM01409	RK51_001660
RK51_001665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_001665	SM00954	Region found in RelA / SpoT proteins
RK51_001675	SM00487	DEAD-like helicases superfamily
RK51_001675	SM00490	helicase superfamily c-terminal domain
RK51_001690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_001690	SM00387	Histidine kinase-like ATPases
RK51_001690	SM00388	His Kinase A (phosphoacceptor) domain
RK51_001695	SM00448	cheY-homologous receiver domain
RK51_001695	SM00862	Transcriptional regulatory protein, C terminal
RK51_001715	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_001715	SM00732	Likely ribonuclease with RNase H fold.
RK51_001795	SM00382	ATPases associated with a variety of cellular activities
RK51_001810	SM00363	S4 RNA-binding domain
RK51_001860	SM01230	RK51_001860
RK51_001870	SM00091	PAS domain
RK51_001870	SM00387	Histidine kinase-like ATPases
RK51_001870	SM00388	His Kinase A (phosphoacceptor) domain
RK51_001875	SM00382	ATPases associated with a variety of cellular activities
RK51_001875	SM00448	cheY-homologous receiver domain
RK51_001880	SM00052	Putative diguanylate phosphodiesterase
RK51_001880	SM00267	diguanylate cyclase
RK51_001880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_001890	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_001935	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RK51_001935	SM00474	3'-5' exonuclease
RK51_001935	SM00475	5'-3' exonuclease
RK51_001935	SM00482	DNA polymerase A domain
RK51_001950	SM01004	Delta-aminolevulinic acid dehydratase
RK51_002010	SM00052	Putative diguanylate phosphodiesterase
RK51_002010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_002010	SM00091	PAS domain
RK51_002010	SM00267	diguanylate cyclase
RK51_002065	SM00749	bacterial OsmY and nodulation domain
RK51_002070	SM00382	ATPases associated with a variety of cellular activities
RK51_002110	SM00052	Putative diguanylate phosphodiesterase
RK51_002110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_002110	SM00091	PAS domain
RK51_002110	SM00267	diguanylate cyclase
RK51_002115	SM00344	helix_turn_helix ASNC type
RK51_002185	SM00354	helix_turn _helix lactose operon repressor
RK51_002190	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_002240	SM00382	ATPases associated with a variety of cellular activities
RK51_002390	SM01001	AIR carboxylase
RK51_002415	SM00257	Lysin motif
RK51_002485	SM00563	Phosphate acyltransferases
RK51_002495	SM00382	ATPases associated with a variety of cellular activities
RK51_002535	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_002555	SM00382	ATPases associated with a variety of cellular activities
RK51_002595	SM00470	ParB-like nuclease domain
RK51_002610	SM01228	RK51_002610
RK51_002685	SM00487	DEAD-like helicases superfamily
RK51_002735	SM01234	RK51_002735
RK51_002750	SM00382	ATPases associated with a variety of cellular activities
RK51_002760	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_002760	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_002775	SM00382	ATPases associated with a variety of cellular activities
RK51_002775	SM00760	Bacterial dnaA protein helix-turn-helix domain
RK51_002780	SM00480	DNA polymerase III beta subunit
RK51_002790	SM00387	Histidine kinase-like ATPases
RK51_002790	SM00433	TopoisomeraseII
RK51_002820	SM00642	Alpha-amylase domain
RK51_002860	SM00829	Enoylreductase
RK51_002970	SM00876	Biotin and Thiamin Synthesis associated domain
RK51_003035	SM00342	helix_turn_helix, arabinose operon control protein
RK51_003045	SM00341	Helicase and RNase D C-terminal
RK51_003045	SM00487	DEAD-like helicases superfamily
RK51_003045	SM00490	helicase superfamily c-terminal domain
RK51_003045	SM00956	RK51_003045
RK51_003070	SM00487	DEAD-like helicases superfamily
RK51_003070	SM00490	helicase superfamily c-terminal domain
RK51_003080	SM00357	Cold shock protein domain
RK51_003080	SM00382	ATPases associated with a variety of cellular activities
RK51_003080	SM00959	Rho termination factor, N-terminal domain
RK51_003150	SM00028	Tetratricopeptide repeats
RK51_003175	SM01219	RK51_003175
RK51_003210	SM00052	Putative diguanylate phosphodiesterase
RK51_003210	SM00897	FIST N domain
RK51_003210	SM01204	RK51_003210
RK51_003215	SM01144	RK51_003215
RK51_003250	SM00052	Putative diguanylate phosphodiesterase
RK51_003255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_003260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_003330	SM00382	ATPases associated with a variety of cellular activities
RK51_003330	SM00962	SRP54-type protein, GTPase domain
RK51_003330	SM00963	SRP54-type protein, helical bundle domain
RK51_003335	SM00382	ATPases associated with a variety of cellular activities
RK51_003355	SM00450	Rhodanese Homology Domain
RK51_003380	SM00563	Phosphate acyltransferases
RK51_003440	SM00360	RNA recognition motif
RK51_003465	SM00155	Phospholipase D. Active site motifs.
RK51_003530	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RK51_003530	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RK51_003535	SM00649	Ribosomal protein L11/L12
RK51_003560	SM00663	RNA polymerase I subunit A N-terminus
RK51_003590	SM00986	Uracil DNA glycosylase superfamily
RK51_003590	SM00987	UreE urease accessory protein, C-terminal domain 
RK51_003610	SM00411	bacterial (prokaryotic) histone like domain
RK51_003620	SM01209	RK51_003620
RK51_003620	SM01210	RK51_003620
RK51_003630	SM00798	AICARFT/IMPCHase bienzyme
RK51_003630	SM00851	MGS-like domain
RK51_003640	SM00422	helix_turn_helix, mercury resistance
RK51_003645	SM00862	Transcriptional regulatory protein, C terminal
RK51_003715	SM00267	diguanylate cyclase
RK51_003720	SM00382	ATPases associated with a variety of cellular activities
RK51_003750	SM00878	Biotin carboxylase C-terminal domain
RK51_003770	SM00479	RK51_003770
RK51_003785	SM00387	Histidine kinase-like ATPases
RK51_003785	SM00388	His Kinase A (phosphoacceptor) domain
RK51_003785	SM00448	cheY-homologous receiver domain
RK51_003820	SM01091	Transporter associated domain
RK51_003825	SM00421	helix_turn_helix, Lux Regulon
RK51_003825	SM00448	cheY-homologous receiver domain
RK51_003860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_003860	SM00387	Histidine kinase-like ATPases
RK51_003860	SM00388	His Kinase A (phosphoacceptor) domain
RK51_003865	SM00448	cheY-homologous receiver domain
RK51_003865	SM00862	Transcriptional regulatory protein, C terminal
RK51_003895	SM00883	Chaperonin 10 Kd subunit
RK51_003920	SM01005	Alanine racemase, C-terminal domain
RK51_003940	SM00841	Elongation factor P, C-terminal
RK51_003940	SM01185	RK51_003940
RK51_004000	SM00971	Serine acetyltransferase, N-terminal
RK51_004015	SM00450	Rhodanese Homology Domain
RK51_004030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_004030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_004050	SM00479	RK51_004050
RK51_004130	SM00257	Lysin motif
RK51_004130	SM00646	RK51_004130
RK51_004135	SM00853	MutL C terminal dimerisation domain
RK51_004135	SM01340	RK51_004135
RK51_004155	SM00244	prohibitin homologues
RK51_004160	SM00244	prohibitin homologues
RK51_004170	SM00788	Adenylosuccinate synthetase
RK51_004180	SM00671	Sel1-like repeats.
RK51_004195	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_004195	SM00357	Cold shock protein domain
RK51_004195	SM00955	RK51_004195
RK51_004200	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RK51_004260	SM01150	RK51_004260
RK51_004265	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_004265	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_004290	SM00382	ATPases associated with a variety of cellular activities
RK51_004335	SM00320	WD40 repeats
RK51_004375	SM00838	Elongation factor G C-terminus
RK51_004375	SM00889	Elongation factor G, domain IV
RK51_004395	SM00919	Malic enzyme, NAD binding domain
RK51_004395	SM01274	RK51_004395
RK51_004435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_004500	SM00965	Secretin and TonB N terminus short domain
RK51_004560	SM01005	Alanine racemase, C-terminal domain
RK51_004710	SM01018	B12 binding domain
RK51_004745	SM00421	helix_turn_helix, Lux Regulon
RK51_004755	SM00052	Putative diguanylate phosphodiesterase
RK51_004755	SM00267	diguanylate cyclase
RK51_004775	SM00965	Secretin and TonB N terminus short domain
RK51_004785	SM00028	Tetratricopeptide repeats
RK51_004790	SM00382	ATPases associated with a variety of cellular activities
RK51_004860	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_004880	SM00670	Large family of predicted nucleotide-binding domains
RK51_004885	SM00487	DEAD-like helicases superfamily
RK51_004885	SM00490	helicase superfamily c-terminal domain
RK51_004920	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_004920	SM00924	MgtE intracellular N domain
RK51_004950	SM00382	ATPases associated with a variety of cellular activities
RK51_004965	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_004975	SM00382	ATPases associated with a variety of cellular activities
RK51_005010	SM00563	Phosphate acyltransferases
RK51_005060	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_005115	SM00495	Chitin-binding domain type 3
RK51_005145	SM00354	helix_turn _helix lactose operon repressor
RK51_005150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_005230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_005230	SM01049	RK51_005230
RK51_005280	SM00478	endonuclease III
RK51_005280	SM00525	RK51_005280
RK51_005300	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_005315	SM01152	RK51_005315
RK51_005345	SM00732	Likely ribonuclease with RNase H fold.
RK51_005370	SM00731	SprT homologues.
RK51_005390	SM00861	Transketolase, pyrimidine binding domain
RK51_005405	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_005545	SM00838	Elongation factor G C-terminus
RK51_005555	SM00358	Double-stranded RNA binding motif
RK51_005555	SM00535	Ribonuclease III family
RK51_005580	SM00073	Histidine Phosphotransfer domain
RK51_005580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_005580	SM00387	Histidine kinase-like ATPases
RK51_005580	SM00388	His Kinase A (phosphoacceptor) domain
RK51_005580	SM00448	cheY-homologous receiver domain
RK51_005600	SM00954	Region found in RelA / SpoT proteins
RK51_005615	SM01192	RK51_005615
RK51_005615	SM01193	RK51_005615
RK51_005650	SM00257	Lysin motif
RK51_005660	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RK51_005660	SM00534	ATPase domain of DNA mismatch repair MUTS family
RK51_005670	SM00382	ATPases associated with a variety of cellular activities
RK51_005680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_005760	SM00829	Enoylreductase
RK51_005790	SM01091	Transporter associated domain
RK51_005800	SM00382	ATPases associated with a variety of cellular activities
RK51_005800	SM00962	SRP54-type protein, GTPase domain
RK51_005800	SM00963	SRP54-type protein, helical bundle domain
RK51_005865	SM00644	RK51_005865
RK51_005870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_005870	SM00895	RK51_005870
RK51_005900	SM00947	Carbonic anhydrase
RK51_005915	SM00382	ATPases associated with a variety of cellular activities
RK51_005985	SM00487	DEAD-like helicases superfamily
RK51_005985	SM00490	helicase superfamily c-terminal domain
RK51_005985	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_006010	SM00938	Nitrogen regulatory protein P-II
RK51_006030	SM00382	ATPases associated with a variety of cellular activities
RK51_006040	SM01068	Putative carbohydrate binding domain
RK51_006060	SM00382	ATPases associated with a variety of cellular activities
RK51_006065	SM00382	ATPases associated with a variety of cellular activities
RK51_006085	SM00091	PAS domain
RK51_006085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_006085	SM00387	Histidine kinase-like ATPases
RK51_006085	SM00388	His Kinase A (phosphoacceptor) domain
RK51_006085	SM00448	cheY-homologous receiver domain
RK51_006155	SM01103	RK51_006155
RK51_006165	SM00382	ATPases associated with a variety of cellular activities
RK51_006205	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_006225	SM01387	RK51_006225
RK51_006230	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_006230	SM00322	K homology RNA-binding domain
RK51_006235	SM00028	Tetratricopeptide repeats
RK51_006240	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_006260	SM00052	Putative diguanylate phosphodiesterase
RK51_006260	SM00091	PAS domain
RK51_006260	SM00267	diguanylate cyclase
RK51_006310	SM01133	RK51_006310
RK51_006315	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RK51_006345	SM00382	ATPases associated with a variety of cellular activities
RK51_006350	SM00838	Elongation factor G C-terminus
RK51_006350	SM00889	Elongation factor G, domain IV
RK51_006370	SM00342	helix_turn_helix, arabinose operon control protein
RK51_006385	SM00382	ATPases associated with a variety of cellular activities
RK51_006390	SM00858	RK51_006390
RK51_006440	SM00028	Tetratricopeptide repeats
RK51_006470	SM01038	Beta galactosidase small chain
RK51_006475	SM00354	helix_turn _helix lactose operon repressor
RK51_006505	SM00354	helix_turn _helix lactose operon repressor
RK51_006520	SM00354	helix_turn _helix lactose operon repressor
RK51_006550	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_006550	SM01134	RK51_006550
RK51_006665	SM00925	MltA specific insert domain
RK51_006680	SM00267	diguanylate cyclase
RK51_006770	SM00900	RK51_006770
RK51_006810	SM00487	DEAD-like helicases superfamily
RK51_006810	SM00490	helicase superfamily c-terminal domain
RK51_006825	SM00495	Chitin-binding domain type 3
RK51_006825	SM00636	RK51_006825
RK51_006920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_006965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_006975	SM00935	Outer membrane protein (OmpH-like)
RK51_007005	SM00481	DNA polymerase alpha chain like domain
RK51_007015	SM00977	TilS substrate C-terminal domain
RK51_007025	SM00938	Nitrogen regulatory protein P-II
RK51_007040	SM00257	Lysin motif
RK51_007045	SM00849	Metallo-beta-lactamase superfamily
RK51_007060	SM00479	RK51_007060
RK51_007130	SM00028	Tetratricopeptide repeats
RK51_007155	SM01130	RK51_007155
RK51_007255	SM00382	ATPases associated with a variety of cellular activities
RK51_007260	SM00387	Histidine kinase-like ATPases
RK51_007260	SM00388	His Kinase A (phosphoacceptor) domain
RK51_007265	SM00382	ATPases associated with a variety of cellular activities
RK51_007265	SM00448	cheY-homologous receiver domain
RK51_007290	SM00382	ATPases associated with a variety of cellular activities
RK51_007350	SM00382	ATPases associated with a variety of cellular activities
RK51_007350	SM00962	SRP54-type protein, GTPase domain
RK51_007365	SM00448	cheY-homologous receiver domain
RK51_007375	SM00073	Histidine Phosphotransfer domain
RK51_007375	SM00260	Two component signalling adaptor domain
RK51_007375	SM00387	Histidine kinase-like ATPases
RK51_007375	SM01231	RK51_007375
RK51_007380	SM00448	cheY-homologous receiver domain
RK51_007390	SM00260	Two component signalling adaptor domain
RK51_007395	SM00260	Two component signalling adaptor domain
RK51_007405	SM00382	ATPases associated with a variety of cellular activities
RK51_007500	SM00855	Phosphoglycerate mutase family
RK51_007505	SM00463	Small MutS-related domain
RK51_007555	SM00825	Beta-ketoacyl synthase
RK51_007570	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_007615	SM00448	cheY-homologous receiver domain
RK51_007635	SM00382	ATPases associated with a variety of cellular activities
RK51_007645	SM00493	RK51_007645
RK51_007710	SM00098	Alkaline phosphatase homologues
RK51_007735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_007745	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_007765	SM00870	RK51_007765
RK51_007785	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RK51_007785	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RK51_007785	SM00493	RK51_007785
RK51_007845	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RK51_007895	SM00479	RK51_007895
RK51_007925	SM00478	endonuclease III
RK51_007925	SM00525	RK51_007925
RK51_007935	SM00900	RK51_007935
RK51_007970	SM00487	DEAD-like helicases superfamily
RK51_007970	SM00490	helicase superfamily c-terminal domain
RK51_007975	SM00382	ATPases associated with a variety of cellular activities
RK51_007975	SM00448	cheY-homologous receiver domain
RK51_007990	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_007995	SM00852	Probable molybdopterin binding domain
RK51_008030	SM00382	ATPases associated with a variety of cellular activities
RK51_008035	SM00382	ATPases associated with a variety of cellular activities
RK51_008080	SM00382	ATPases associated with a variety of cellular activities
RK51_008085	SM00642	Alpha-amylase domain
RK51_008090	SM00267	diguanylate cyclase
RK51_008115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_008150	SM00226	Low molecular weight phosphatase family
RK51_008165	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_008180	SM00363	S4 RNA-binding domain
RK51_008210	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RK51_008215	SM00822	RK51_008215
RK51_008225	SM00825	Beta-ketoacyl synthase
RK51_008300	SM00260	Two component signalling adaptor domain
RK51_008300	SM00448	cheY-homologous receiver domain
RK51_008305	SM00481	DNA polymerase alpha chain like domain
RK51_008320	SM00822	RK51_008320
RK51_008335	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_008340	SM00411	bacterial (prokaryotic) histone like domain
RK51_008350	SM00028	Tetratricopeptide repeats
RK51_008355	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RK51_008415	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_008430	SM00387	Histidine kinase-like ATPases
RK51_008430	SM00388	His Kinase A (phosphoacceptor) domain
RK51_008435	SM00421	helix_turn_helix, Lux Regulon
RK51_008435	SM00448	cheY-homologous receiver domain
RK51_008505	SM00382	ATPases associated with a variety of cellular activities
RK51_008515	SM00342	helix_turn_helix, arabinose operon control protein
RK51_008555	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_008555	SM00364	Leucine-rich repeats, bacterial type
RK51_008555	SM00369	Leucine-rich repeats, typical (most populated) subfamily
RK51_008560	SM00387	Histidine kinase-like ATPases
RK51_008560	SM00388	His Kinase A (phosphoacceptor) domain
RK51_008565	SM00448	cheY-homologous receiver domain
RK51_008565	SM00862	Transcriptional regulatory protein, C terminal
RK51_008575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_008575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_008580	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_008585	SM00052	Putative diguanylate phosphodiesterase
RK51_008585	SM00091	PAS domain
RK51_008640	SM00387	Histidine kinase-like ATPases
RK51_008640	SM00388	His Kinase A (phosphoacceptor) domain
RK51_008640	SM00448	cheY-homologous receiver domain
RK51_008665	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_008665	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_008705	SM00481	DNA polymerase alpha chain like domain
RK51_008720	SM00363	S4 RNA-binding domain
RK51_008735	SM00841	Elongation factor P, C-terminal
RK51_008735	SM01185	RK51_008735
RK51_008745	SM00486	DNA polymerase type-B family
RK51_008750	SM00421	helix_turn_helix, Lux Regulon
RK51_008750	SM00448	cheY-homologous receiver domain
RK51_008755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_008755	SM00465	GIY-YIG type nucleases (URI domain)
RK51_008810	SM00852	Probable molybdopterin binding domain
RK51_008835	SM00434	DNA Topoisomerase IV
RK51_008925	SM00849	Metallo-beta-lactamase superfamily
RK51_008955	SM00387	Histidine kinase-like ATPases
RK51_008955	SM01049	RK51_008955
RK51_008960	SM00421	helix_turn_helix, Lux Regulon
RK51_008960	SM00448	cheY-homologous receiver domain
RK51_008965	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_008975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_008975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_008980	SM00479	RK51_008980
RK51_008985	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_008985	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_009020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_009035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_009035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_009050	SM00052	Putative diguanylate phosphodiesterase
RK51_009075	SM00387	Histidine kinase-like ATPases
RK51_009075	SM00388	His Kinase A (phosphoacceptor) domain
RK51_009075	SM00448	cheY-homologous receiver domain
RK51_009110	SM00091	PAS domain
RK51_009110	SM00382	ATPases associated with a variety of cellular activities
RK51_009435	SM00974	RK51_009435
RK51_010050	SM01230	RK51_010050
RK51_010065	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_010100	SM01131	RK51_010100
RK51_010110	SM00052	Putative diguanylate phosphodiesterase
RK51_010120	SM00635	Bacterial Ig-like domain 2
RK51_010125	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_010130	SM00342	helix_turn_helix, arabinose operon control protein
RK51_010140	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_010155	SM01118	RK51_010155
RK51_010165	SM01266	RK51_010165
RK51_010180	SM00387	Histidine kinase-like ATPases
RK51_010180	SM00388	His Kinase A (phosphoacceptor) domain
RK51_010180	SM00448	cheY-homologous receiver domain
RK51_010185	SM00052	Putative diguanylate phosphodiesterase
RK51_010185	SM00267	diguanylate cyclase
RK51_010185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_010195	SM00028	Tetratricopeptide repeats
RK51_010275	SM00387	Histidine kinase-like ATPases
RK51_010275	SM00388	His Kinase A (phosphoacceptor) domain
RK51_010280	SM00448	cheY-homologous receiver domain
RK51_010280	SM00862	Transcriptional regulatory protein, C terminal
RK51_010290	SM00822	RK51_010290
RK51_010295	SM01236	RK51_010295
RK51_010320	SM00382	ATPases associated with a variety of cellular activities
RK51_010325	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_010325	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_010330	SM00479	RK51_010330
RK51_010390	SM00091	PAS domain
RK51_010390	SM00387	Histidine kinase-like ATPases
RK51_010395	SM00448	cheY-homologous receiver domain
RK51_010410	SM01350	RK51_010410
RK51_010435	SM00382	ATPases associated with a variety of cellular activities
RK51_010460	SM00342	helix_turn_helix, arabinose operon control protein
RK51_010615	SM00382	ATPases associated with a variety of cellular activities
RK51_010710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_010710	SM00895	RK51_010710
RK51_010745	SM00020	Trypsin-like serine protease
RK51_010745	SM00495	Chitin-binding domain type 3
RK51_010770	SM00028	Tetratricopeptide repeats
RK51_010770	SM00267	diguanylate cyclase
RK51_010790	SM00327	von Willebrand factor (vWF) type A domain
RK51_010790	SM00736	Dystroglycan-type cadherin-like domains.
RK51_010810	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RK51_010815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_010840	SM00382	ATPases associated with a variety of cellular activities
RK51_010855	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_010895	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_010920	SM00382	ATPases associated with a variety of cellular activities
RK51_010930	SM00945	ProQ/FINO family
RK51_010935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RK51_010935	SM00245	tail specific protease
RK51_010975	SM00981	RK51_010975
RK51_010985	SM00382	ATPases associated with a variety of cellular activities
RK51_011105	SM00479	RK51_011105
RK51_011115	SM00387	Histidine kinase-like ATPases
RK51_011115	SM00388	His Kinase A (phosphoacceptor) domain
RK51_011115	SM00448	cheY-homologous receiver domain
RK51_011120	SM00897	FIST N domain
RK51_011120	SM01204	RK51_011120
RK51_011170	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_011170	SM00419	helix_turn_helix, cAMP Regulatory protein
RK51_011205	SM00382	ATPases associated with a variety of cellular activities
RK51_011285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_011325	SM00382	ATPases associated with a variety of cellular activities
RK51_011335	SM00387	Histidine kinase-like ATPases
RK51_011335	SM00388	His Kinase A (phosphoacceptor) domain
RK51_011340	SM00382	ATPases associated with a variety of cellular activities
RK51_011340	SM00448	cheY-homologous receiver domain
RK51_011360	SM00382	ATPases associated with a variety of cellular activities
RK51_011370	SM00852	Probable molybdopterin binding domain
RK51_011385	SM01144	RK51_011385
RK51_011420	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_011435	SM00267	diguanylate cyclase
RK51_011440	SM00448	cheY-homologous receiver domain
RK51_011505	SM00382	ATPases associated with a variety of cellular activities
RK51_011505	SM00448	cheY-homologous receiver domain
RK51_011585	SM00382	ATPases associated with a variety of cellular activities
RK51_011585	SM00487	DEAD-like helicases superfamily
RK51_011585	SM00490	helicase superfamily c-terminal domain
RK51_011585	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_011615	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_011640	SM00479	RK51_011640
RK51_011645	SM00267	diguanylate cyclase
RK51_011645	SM01079	RK51_011645
RK51_011690	SM00382	ATPases associated with a variety of cellular activities
RK51_011695	SM00382	ATPases associated with a variety of cellular activities
RK51_011735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_011740	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RK51_011785	SM00240	Forkhead associated domain
RK51_011805	SM00344	helix_turn_helix ASNC type
RK51_011840	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_011875	SM00382	ATPases associated with a variety of cellular activities
RK51_011875	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_011880	SM00382	ATPases associated with a variety of cellular activities
RK51_011940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_011945	SM00052	Putative diguanylate phosphodiesterase
RK51_011945	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_011945	SM00091	PAS domain
RK51_011945	SM00267	diguanylate cyclase
RK51_011950	SM00448	cheY-homologous receiver domain
RK51_011955	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_011955	SM00387	Histidine kinase-like ATPases
RK51_011975	SM00855	Phosphoglycerate mutase family
RK51_012095	SM00862	Transcriptional regulatory protein, C terminal
RK51_012275	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_012275	SM00357	Cold shock protein domain
RK51_012275	SM00955	RK51_012275
RK51_012280	SM00357	Cold shock protein domain
RK51_012435	SM00382	ATPases associated with a variety of cellular activities
RK51_012440	SM00382	ATPases associated with a variety of cellular activities
RK51_012455	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_012485	SM01130	RK51_012485
RK51_012520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_012520	SM00895	RK51_012520
RK51_012530	SM00245	tail specific protease
RK51_012600	SM00382	ATPases associated with a variety of cellular activities
RK51_012625	SM00855	Phosphoglycerate mutase family
RK51_012655	SM00479	RK51_012655
RK51_012690	SM00411	bacterial (prokaryotic) histone like domain
RK51_012705	SM00873	B3/4 domain
RK51_012705	SM00874	tRNA synthetase B5 domain
RK51_012705	SM00896	Ferredoxin-fold anticodon binding domain
RK51_012715	SM00267	diguanylate cyclase
RK51_012740	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_012765	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RK51_012780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_012780	SM00866	RK51_012780
RK51_012870	SM00487	DEAD-like helicases superfamily
RK51_012870	SM00490	helicase superfamily c-terminal domain
RK51_012870	SM00847	Helicase associated domain (HA2)  Add an annotation
RK51_012875	SM00919	Malic enzyme, NAD binding domain
RK51_012875	SM01274	RK51_012875
RK51_012890	SM00267	diguanylate cyclase
RK51_012915	SM00382	ATPases associated with a variety of cellular activities
RK51_012920	SM00382	ATPases associated with a variety of cellular activities
RK51_012940	SM00100	Cyclic nucleotide-monophosphate binding domain
RK51_012940	SM00387	Histidine kinase-like ATPases
RK51_012945	SM00448	cheY-homologous receiver domain
RK51_013045	SM00382	ATPases associated with a variety of cellular activities
RK51_013095	SM00363	S4 RNA-binding domain
RK51_013100	SM00487	DEAD-like helicases superfamily
RK51_013100	SM00490	helicase superfamily c-terminal domain
RK51_013110	SM00448	cheY-homologous receiver domain
RK51_013110	SM00862	Transcriptional regulatory protein, C terminal
RK51_013115	SM00387	Histidine kinase-like ATPases
RK51_013160	SM00421	helix_turn_helix, Lux Regulon
RK51_013160	SM00448	cheY-homologous receiver domain
RK51_013165	SM00387	Histidine kinase-like ATPases
RK51_013165	SM00388	His Kinase A (phosphoacceptor) domain
RK51_013170	SM00450	Rhodanese Homology Domain
RK51_013200	SM00382	ATPases associated with a variety of cellular activities
RK51_013220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_013220	SM00382	ATPases associated with a variety of cellular activities
RK51_013245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_013245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_013255	SM00155	Phospholipase D. Active site motifs.
RK51_013310	SM00382	ATPases associated with a variety of cellular activities
RK51_013330	SM00382	ATPases associated with a variety of cellular activities
RK51_013335	SM00382	ATPases associated with a variety of cellular activities
RK51_013345	SM01131	RK51_013345
RK51_013420	SM00840	RK51_013420
RK51_013435	SM00052	Putative diguanylate phosphodiesterase
RK51_013490	SM00382	ATPases associated with a variety of cellular activities
RK51_013505	SM00528	Domain in histone-like proteins of HNS family
RK51_013605	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_013605	SM00876	Biotin and Thiamin Synthesis associated domain
RK51_013635	SM00382	ATPases associated with a variety of cellular activities
RK51_013645	SM00843	RK51_013645
RK51_013650	SM00344	helix_turn_helix ASNC type
RK51_013655	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RK51_013655	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RK51_013705	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_013730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_013730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_013745	SM00857	Resolvase, N terminal domain
RK51_013780	SM00387	Histidine kinase-like ATPases
RK51_013780	SM00388	His Kinase A (phosphoacceptor) domain
RK51_013780	SM00448	cheY-homologous receiver domain
RK51_013815	SM00028	Tetratricopeptide repeats
RK51_013870	SM00382	ATPases associated with a variety of cellular activities
RK51_013875	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_013880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_013960	SM00448	cheY-homologous receiver domain
RK51_013960	SM00862	Transcriptional regulatory protein, C terminal
RK51_013970	SM00354	helix_turn _helix lactose operon repressor
RK51_014005	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RK51_014005	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RK51_014005	SM00493	RK51_014005
RK51_014035	SM00316	Ribosomal protein S1-like RNA-binding domain
RK51_014045	SM00382	ATPases associated with a variety of cellular activities
RK51_014045	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_014055	SM00357	Cold shock protein domain
RK51_014080	SM00491	RK51_014080
RK51_014105	SM01276	RK51_014105
RK51_014120	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_014120	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_014125	SM00382	ATPases associated with a variety of cellular activities
RK51_014175	SM00763	PrkA AAA domain
RK51_014205	SM00382	ATPases associated with a variety of cellular activities
RK51_014210	SM00849	Metallo-beta-lactamase superfamily
RK51_014225	SM00382	ATPases associated with a variety of cellular activities
RK51_014240	SM00487	DEAD-like helicases superfamily
RK51_014240	SM00490	helicase superfamily c-terminal domain
RK51_014240	SM00982	RK51_014240
RK51_014240	SM01058	CarD-like/TRCF domain
RK51_014295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_014295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_014320	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_014350	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_014350	SM00267	diguanylate cyclase
RK51_014380	SM00344	helix_turn_helix ASNC type
RK51_014450	SM00978	RK51_014450
RK51_014460	SM00563	Phosphate acyltransferases
RK51_014485	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RK51_014515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_014520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_014525	SM01144	RK51_014525
RK51_014535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_014545	SM00411	bacterial (prokaryotic) histone like domain
RK51_014550	SM00382	ATPases associated with a variety of cellular activities
RK51_014550	SM00464	Found in ATP-dependent protease La (LON)
RK51_014555	SM00382	ATPases associated with a variety of cellular activities
RK51_014555	SM00994	ClpX C4-type zinc finger
RK51_014555	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_014570	SM00387	Histidine kinase-like ATPases
RK51_014570	SM00388	His Kinase A (phosphoacceptor) domain
RK51_014575	SM00382	ATPases associated with a variety of cellular activities
RK51_014575	SM00448	cheY-homologous receiver domain
RK51_014610	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_014630	SM00487	DEAD-like helicases superfamily
RK51_014630	SM00490	helicase superfamily c-terminal domain
RK51_014635	SM01091	Transporter associated domain
RK51_014665	SM00563	Phosphate acyltransferases
RK51_014725	SM00825	Beta-ketoacyl synthase
RK51_014735	SM00822	RK51_014735
RK51_014740	SM00825	Beta-ketoacyl synthase
RK51_014795	SM00474	3'-5' exonuclease
RK51_014825	SM00487	DEAD-like helicases superfamily
RK51_014825	SM00491	RK51_014825
RK51_014845	SM00836	DALR anticodon binding domain
RK51_014845	SM01016	Arginyl tRNA synthetase N terminal dom
RK51_014865	SM00899	RK51_014865
RK51_014880	SM00342	helix_turn_helix, arabinose operon control protein
RK51_014890	SM00382	ATPases associated with a variety of cellular activities
RK51_014900	SM00881	CoA binding domain
RK51_014915	SM00861	Transketolase, pyrimidine binding domain
RK51_015025	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RK51_015045	SM00387	Histidine kinase-like ATPases
RK51_015050	SM00862	Transcriptional regulatory protein, C terminal
RK51_015080	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_015085	SM00938	Nitrogen regulatory protein P-II
RK51_015120	SM00244	prohibitin homologues
RK51_015150	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RK51_015150	SM00292	breast cancer carboxy-terminal domain
RK51_015150	SM00532	Ligase N family
RK51_015155	SM00771	ZipA, C-terminal domain (FtsZ-binding)
RK51_015230	SM00047	Lysozyme subfamily 2
RK51_015280	SM00138	Methyltransferase, chemotaxis proteins 
RK51_015285	SM00260	Two component signalling adaptor domain
RK51_015285	SM00448	cheY-homologous receiver domain
RK51_015290	SM00858	RK51_015290
RK51_015380	SM01081	Putative carbohydrate binding domain
RK51_015410	SM00463	Small MutS-related domain
RK51_015415	SM00363	S4 RNA-binding domain
RK51_015450	SM00937	RK51_015450
RK51_015470	SM01400	RK51_015470
RK51_015595	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_015610	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_015610	SM01091	Transporter associated domain
RK51_015665	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_015680	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_015695	SM00862	Transcriptional regulatory protein, C terminal
RK51_015705	SM00642	Alpha-amylase domain
RK51_015715	SM00354	helix_turn _helix lactose operon repressor
RK51_015730	SM00382	ATPases associated with a variety of cellular activities
RK51_015730	SM00930	RK51_015730
RK51_015760	SM00028	Tetratricopeptide repeats
RK51_015765	SM00267	diguanylate cyclase
RK51_015775	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RK51_015775	SM00475	5'-3' exonuclease
RK51_015780	SM00477	DNA/RNA non-specific endonuclease
RK51_015780	SM00892	DNA/RNA non-specific endonuclease
RK51_015805	SM00981	RK51_015805
RK51_015830	SM00861	Transketolase, pyrimidine binding domain
RK51_015880	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RK51_015930	SM01211	RK51_015930
RK51_015935	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_015990	SM00271	DnaJ molecular chaperone homology domain
RK51_016140	SM00495	Chitin-binding domain type 3
RK51_016155	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_016155	SM01240	RK51_016155
RK51_016175	SM00382	ATPases associated with a variety of cellular activities
RK51_016180	SM00564	beta-propeller repeat
RK51_016200	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_016215	SM00562	RK51_016215
RK51_016240	SM00271	DnaJ molecular chaperone homology domain
RK51_016290	SM01323	RK51_016290
RK51_016305	SM00020	Trypsin-like serine protease
RK51_016315	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_016365	SM00382	ATPases associated with a variety of cellular activities
RK51_016395	SM00091	PAS domain
RK51_016395	SM00387	Histidine kinase-like ATPases
RK51_016395	SM00388	His Kinase A (phosphoacceptor) domain
RK51_016400	SM00448	cheY-homologous receiver domain
RK51_016400	SM00862	Transcriptional regulatory protein, C terminal
RK51_016480	SM00382	ATPases associated with a variety of cellular activities
RK51_016480	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_016490	SM00363	S4 RNA-binding domain
RK51_016500	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_016510	SM00830	Chorismate mutase type II
RK51_016530	SM00382	ATPases associated with a variety of cellular activities
RK51_016550	SM00830	Chorismate mutase type II
RK51_016595	SM00448	cheY-homologous receiver domain
RK51_016595	SM00850	LytTr DNA-binding domain
RK51_016620	SM00904	Riboflavin kinase
RK51_016640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_016660	SM01154	RK51_016660
RK51_016680	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_016695	SM00927	DNA mismatch repair enzyme MutH
RK51_016715	SM00382	ATPases associated with a variety of cellular activities
RK51_016760	SM00487	DEAD-like helicases superfamily
RK51_016760	SM00490	helicase superfamily c-terminal domain
RK51_016785	SM00986	Uracil DNA glycosylase superfamily
RK51_016785	SM00987	UreE urease accessory protein, C-terminal domain 
RK51_016795	SM00518	AP endonuclease family 2
RK51_016840	SM00448	cheY-homologous receiver domain
RK51_016840	SM00862	Transcriptional regulatory protein, C terminal
RK51_016850	SM00073	Histidine Phosphotransfer domain
RK51_016850	SM00091	PAS domain
RK51_016850	SM00387	Histidine kinase-like ATPases
RK51_016850	SM00388	His Kinase A (phosphoacceptor) domain
RK51_016850	SM00448	cheY-homologous receiver domain
RK51_016855	SM00091	PAS domain
RK51_016855	SM00267	diguanylate cyclase
RK51_016860	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_016895	SM00382	ATPases associated with a variety of cellular activities
RK51_016945	SM00487	DEAD-like helicases superfamily
RK51_016955	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_017055	SM00052	Putative diguanylate phosphodiesterase
RK51_017085	SM00246	Wiskott Aldrich syndrome homology region 2
RK51_017195	SM00862	Transcriptional regulatory protein, C terminal
RK51_017230	SM00382	ATPases associated with a variety of cellular activities
RK51_017260	SM00862	Transcriptional regulatory protein, C terminal
RK51_017305	SM01276	RK51_017305
RK51_017310	SM00528	Domain in histone-like proteins of HNS family
RK51_017330	SM00342	helix_turn_helix, arabinose operon control protein
RK51_017335	SM00382	ATPases associated with a variety of cellular activities
RK51_017340	SM00382	ATPases associated with a variety of cellular activities
RK51_017380	SM00988	UreE urease accessory protein, N-terminal domain
RK51_017415	SM00635	Bacterial Ig-like domain 2
RK51_017500	SM00822	RK51_017500
RK51_017550	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_017565	SM00020	Trypsin-like serine protease
RK51_017595	SM00357	Cold shock protein domain
RK51_017615	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_017660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_017660	SM00387	Histidine kinase-like ATPases
RK51_017660	SM00388	His Kinase A (phosphoacceptor) domain
RK51_017665	SM00448	cheY-homologous receiver domain
RK51_017665	SM00862	Transcriptional regulatory protein, C terminal
RK51_017680	SM01065	Starch binding domain
RK51_017720	SM00563	Phosphate acyltransferases
RK51_017730	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_017735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_017760	SM00924	MgtE intracellular N domain
RK51_017775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_017790	SM00344	helix_turn_helix ASNC type
RK51_017810	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RK51_017815	SM00387	Histidine kinase-like ATPases
RK51_017815	SM00388	His Kinase A (phosphoacceptor) domain
RK51_017815	SM00448	cheY-homologous receiver domain
RK51_017850	SM00465	GIY-YIG type nucleases (URI domain)
RK51_017860	SM00387	Histidine kinase-like ATPases
RK51_017860	SM00388	His Kinase A (phosphoacceptor) domain
RK51_017860	SM00448	cheY-homologous receiver domain
RK51_017865	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_017890	SM00344	helix_turn_helix ASNC type
RK51_017940	SM00822	RK51_017940
RK51_017975	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_017990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_017990	SM00387	Histidine kinase-like ATPases
RK51_017995	SM00421	helix_turn_helix, Lux Regulon
RK51_017995	SM00448	cheY-homologous receiver domain
RK51_018030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_018070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_018075	SM00861	Transketolase, pyrimidine binding domain
RK51_018100	SM00636	RK51_018100
RK51_018105	SM00052	Putative diguanylate phosphodiesterase
RK51_018105	SM00267	diguanylate cyclase
RK51_018110	SM00450	Rhodanese Homology Domain
RK51_018135	SM00852	Probable molybdopterin binding domain
RK51_018175	SM00448	cheY-homologous receiver domain
RK51_018190	SM01240	RK51_018190
RK51_018200	SM00893	Electron transfer flavoprotein domain
RK51_018205	SM00893	Electron transfer flavoprotein domain
RK51_018220	SM00382	ATPases associated with a variety of cellular activities
RK51_018245	SM00382	ATPases associated with a variety of cellular activities
RK51_018285	SM00422	helix_turn_helix, mercury resistance
RK51_018315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_018320	SM01266	RK51_018320
RK51_018345	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_018345	SM00091	PAS domain
RK51_018345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_018345	SM00387	Histidine kinase-like ATPases
RK51_018345	SM00388	His Kinase A (phosphoacceptor) domain
RK51_018345	SM00448	cheY-homologous receiver domain
RK51_018355	SM00878	Biotin carboxylase C-terminal domain
RK51_018375	SM00422	helix_turn_helix, mercury resistance
RK51_018410	SM00822	RK51_018410
RK51_018420	SM00028	Tetratricopeptide repeats
RK51_018420	SM00267	diguanylate cyclase
RK51_018450	SM00382	ATPases associated with a variety of cellular activities
RK51_018465	SM00244	prohibitin homologues
RK51_018480	SM00052	Putative diguanylate phosphodiesterase
RK51_018480	SM00091	PAS domain
RK51_018480	SM00267	diguanylate cyclase
RK51_018500	SM00387	Histidine kinase-like ATPases
RK51_018500	SM00388	His Kinase A (phosphoacceptor) domain
RK51_018500	SM00448	cheY-homologous receiver domain
RK51_018565	SM00052	Putative diguanylate phosphodiesterase
RK51_018565	SM00267	diguanylate cyclase
RK51_018575	SM00382	ATPases associated with a variety of cellular activities
RK51_018595	SM00354	helix_turn _helix lactose operon repressor
RK51_018630	SM00448	cheY-homologous receiver domain
RK51_018630	SM00862	Transcriptional regulatory protein, C terminal
RK51_018635	SM00388	His Kinase A (phosphoacceptor) domain
RK51_018640	SM00871	Bacterial transcription activator, effector binding domain
RK51_018645	SM00098	Alkaline phosphatase homologues
RK51_018665	SM00028	Tetratricopeptide repeats
RK51_018665	SM00267	diguanylate cyclase
RK51_018685	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_018710	SM01012	RK51_018710
RK51_018730	SM00382	ATPases associated with a variety of cellular activities
RK51_018785	SM00448	cheY-homologous receiver domain
RK51_018790	SM00220	Serine/Threonine protein kinases, catalytic domain
RK51_018800	SM00240	Forkhead associated domain
RK51_018830	SM00331	Sigma factor PP2C-like phosphatases
RK51_018830	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RK51_018875	SM00382	ATPases associated with a variety of cellular activities
RK51_018875	SM01086	C-terminal, D2-small domain, of ClpB protein
RK51_018930	SM00342	helix_turn_helix, arabinose operon control protein
RK51_018970	SM00382	ATPases associated with a variety of cellular activities
RK51_019020	SM01005	Alanine racemase, C-terminal domain
RK51_019025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_019025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_019040	SM00642	Alpha-amylase domain
RK51_019060	SM00880	RK51_019060
RK51_019190	SM00342	helix_turn_helix, arabinose operon control protein
RK51_019235	SM00387	Histidine kinase-like ATPases
RK51_019240	SM00421	helix_turn_helix, Lux Regulon
RK51_019240	SM00448	cheY-homologous receiver domain
RK51_019270	SM00450	Rhodanese Homology Domain
RK51_019280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_019330	SM00342	helix_turn_helix, arabinose operon control protein
RK51_019370	SM00382	ATPases associated with a variety of cellular activities
RK51_019380	SM00267	diguanylate cyclase
RK51_019380	SM00448	cheY-homologous receiver domain
RK51_019390	SM00267	diguanylate cyclase
RK51_019405	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RK51_019405	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RK51_019415	SM00387	Histidine kinase-like ATPases
RK51_019415	SM00388	His Kinase A (phosphoacceptor) domain
RK51_019420	SM00448	cheY-homologous receiver domain
RK51_019420	SM00862	Transcriptional regulatory protein, C terminal
RK51_019475	SM00881	CoA binding domain
RK51_019500	SM00091	PAS domain
RK51_019500	SM00267	diguanylate cyclase
RK51_019500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_019510	SM00796	Allophanate hydrolase subunit 1
RK51_019515	SM00797	Allophanate hydrolase subunit 2
RK51_019530	SM00382	ATPases associated with a variety of cellular activities
RK51_019545	SM00052	Putative diguanylate phosphodiesterase
RK51_019545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_019545	SM00267	diguanylate cyclase
RK51_019555	SM00271	DnaJ molecular chaperone homology domain
RK51_019615	SM01321	RK51_019615
RK51_019620	SM00782	PhnA Zinc-Ribbon
RK51_019655	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_019660	SM00867	YceI-like domain 
RK51_019680	SM00052	Putative diguanylate phosphodiesterase
RK51_019685	SM00487	DEAD-like helicases superfamily
RK51_019685	SM00490	helicase superfamily c-terminal domain
RK51_019700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_019720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RK51_019755	SM00495	Chitin-binding domain type 3
RK51_019755	SM00636	RK51_019755
RK51_019765	SM00342	helix_turn_helix, arabinose operon control protein
RK51_019780	SM00448	cheY-homologous receiver domain
RK51_019785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_019785	SM00387	Histidine kinase-like ATPases
RK51_019785	SM00388	His Kinase A (phosphoacceptor) domain
RK51_019805	SM00382	ATPases associated with a variety of cellular activities
RK51_019815	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_019815	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_019825	SM00052	Putative diguanylate phosphodiesterase
RK51_019845	SM00354	helix_turn _helix lactose operon repressor
RK51_019895	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_019940	SM00479	RK51_019940
RK51_019945	SM00382	ATPases associated with a variety of cellular activities
RK51_019980	SM00422	helix_turn_helix, mercury resistance
RK51_020015	SM00924	MgtE intracellular N domain
RK51_020055	SM00953	RK51_020055
RK51_020075	SM00704	CDGSH-type zinc finger. Function unknown.
RK51_020085	SM00448	cheY-homologous receiver domain
RK51_020090	SM00387	Histidine kinase-like ATPases
RK51_020140	SM00014	Acid phosphatase homologues
RK51_020175	SM00260	Two component signalling adaptor domain
RK51_020175	SM00448	cheY-homologous receiver domain
RK51_020190	SM00448	cheY-homologous receiver domain
RK51_020200	SM00421	helix_turn_helix, Lux Regulon
RK51_020200	SM00448	cheY-homologous receiver domain
RK51_020210	SM00267	diguanylate cyclase
RK51_020215	SM00421	helix_turn_helix, Lux Regulon
RK51_020215	SM00448	cheY-homologous receiver domain
RK51_020220	SM00052	Putative diguanylate phosphodiesterase
RK51_020220	SM00448	cheY-homologous receiver domain
RK51_020225	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_020225	SM00387	Histidine kinase-like ATPases
RK51_020225	SM00388	His Kinase A (phosphoacceptor) domain
RK51_020225	SM00448	cheY-homologous receiver domain
RK51_020255	SM00327	von Willebrand factor (vWF) type A domain
RK51_020325	SM00342	helix_turn_helix, arabinose operon control protein
RK51_020340	SM00052	Putative diguanylate phosphodiesterase
RK51_020355	SM00387	Histidine kinase-like ATPases
RK51_020355	SM00448	cheY-homologous receiver domain
RK51_020405	SM00990	RK51_020405
RK51_020410	SM00028	Tetratricopeptide repeats
RK51_020440	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RK51_020460	SM00327	von Willebrand factor (vWF) type A domain
RK51_020465	SM00327	von Willebrand factor (vWF) type A domain
RK51_020500	SM00028	Tetratricopeptide repeats
RK51_020515	SM00862	Transcriptional regulatory protein, C terminal
RK51_020530	SM00073	Histidine Phosphotransfer domain
RK51_020530	SM00387	Histidine kinase-like ATPases
RK51_020530	SM00388	His Kinase A (phosphoacceptor) domain
RK51_020530	SM00448	cheY-homologous receiver domain
RK51_020540	SM00851	MGS-like domain
RK51_020590	SM00342	helix_turn_helix, arabinose operon control protein
RK51_020600	SM00422	helix_turn_helix, mercury resistance
RK51_020605	SM00382	ATPases associated with a variety of cellular activities
RK51_020670	SM00861	Transketolase, pyrimidine binding domain
RK51_020710	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_020710	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RK51_020715	SM00382	ATPases associated with a variety of cellular activities
RK51_020755	SM00822	RK51_020755
RK51_020790	SM00422	helix_turn_helix, mercury resistance
RK51_020825	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_020825	SM00091	PAS domain
RK51_020825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_020840	SM00052	Putative diguanylate phosphodiesterase
RK51_020840	SM00267	diguanylate cyclase
RK51_020845	SM00487	DEAD-like helicases superfamily
RK51_020845	SM00490	helicase superfamily c-terminal domain
RK51_020850	SM00357	Cold shock protein domain
RK51_020850	SM00955	RK51_020850
RK51_020855	SM00342	helix_turn_helix, arabinose operon control protein
RK51_020910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_020915	SM00382	ATPases associated with a variety of cellular activities
RK51_020920	SM00052	Putative diguanylate phosphodiesterase
RK51_020940	SM00487	DEAD-like helicases superfamily
RK51_020940	SM00490	helicase superfamily c-terminal domain
RK51_020945	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RK51_020975	SM00487	DEAD-like helicases superfamily
RK51_020975	SM00490	helicase superfamily c-terminal domain
RK51_021080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_021080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_021090	SM00382	ATPases associated with a variety of cellular activities
RK51_021110	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_021110	SM00267	diguanylate cyclase
RK51_021120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_021120	SM00091	PAS domain
RK51_021120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_021130	SM00357	Cold shock protein domain
RK51_021135	SM01322	RK51_021135
RK51_021230	SM00342	helix_turn_helix, arabinose operon control protein
RK51_021295	SM00052	Putative diguanylate phosphodiesterase
RK51_021295	SM00267	diguanylate cyclase
RK51_021330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_021330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_021350	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_021360	SM00481	DNA polymerase alpha chain like domain
RK51_021400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_021410	SM00342	helix_turn_helix, arabinose operon control protein
RK51_021435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_021435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_021445	SM00382	ATPases associated with a variety of cellular activities
RK51_021465	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RK51_021510	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RK51_021510	SM00267	diguanylate cyclase
RK51_021555	SM00382	ATPases associated with a variety of cellular activities
RK51_021580	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RK51_021585	SM00642	Alpha-amylase domain
RK51_021680	SM00260	Two component signalling adaptor domain
RK51_021680	SM00448	cheY-homologous receiver domain
RK51_021700	SM00729	Elongator protein 3, MiaB family, Radical SAM
RK51_021730	SM00382	ATPases associated with a variety of cellular activities
RK51_021820	SM00342	helix_turn_helix, arabinose operon control protein
RK51_021840	SM00342	helix_turn_helix, arabinose operon control protein
RK51_021840	SM00871	Bacterial transcription activator, effector binding domain
RK51_021890	SM00487	DEAD-like helicases superfamily
RK51_021890	SM00490	helicase superfamily c-terminal domain
RK51_021935	SM00342	helix_turn_helix, arabinose operon control protein
RK51_021970	SM00788	Adenylosuccinate synthetase
RK51_021975	SM00870	RK51_021975
RK51_022000	SM00421	helix_turn_helix, Lux Regulon
RK51_022045	SM00267	diguanylate cyclase
RK51_022050	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_022055	SM00421	helix_turn_helix, Lux Regulon
RK51_022070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_022070	SM00866	RK51_022070
RK51_022095	SM00382	ATPases associated with a variety of cellular activities
RK51_022150	SM00155	Phospholipase D. Active site motifs.
RK51_022160	SM01022	RK51_022160
RK51_022170	SM00028	Tetratricopeptide repeats
RK51_022180	SM00422	helix_turn_helix, mercury resistance
RK51_022210	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RK51_022220	SM00838	Elongation factor G C-terminus
RK51_022220	SM00889	Elongation factor G, domain IV
RK51_022320	SM00248	ankyrin repeats
RK51_022325	SM01060	RK51_022325
RK51_022335	SM00420	helix_turn_helix, Deoxyribose operon repressor
RK51_022335	SM01134	RK51_022335
RK51_022415	SM00883	Chaperonin 10 Kd subunit
RK51_022425	SM00450	Rhodanese Homology Domain
RK51_022450	SM01240	RK51_022450
RK51_022525	SM00858	RK51_022525
RK51_022610	SM00631	RK51_022610
RK51_022640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_022640	SM00866	RK51_022640
RK51_022650	SM00382	ATPases associated with a variety of cellular activities
RK51_022680	SM00354	helix_turn _helix lactose operon repressor
RK51_022720	SM00382	ATPases associated with a variety of cellular activities
RK51_022735	SM01057	Eukaryotic-type carbonic anhydrase
RK51_022795	SM01266	RK51_022795
RK51_022830	SM00267	diguanylate cyclase
RK51_022840	SM00530	Helix-turn-helix XRE-family like proteins 
RK51_022845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_022850	SM00267	diguanylate cyclase
RK51_022850	SM01079	RK51_022850
RK51_022925	SM00267	diguanylate cyclase
RK51_022930	SM00382	ATPases associated with a variety of cellular activities
RK51_022930	SM00448	cheY-homologous receiver domain
RK51_022935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RK51_022935	SM00387	Histidine kinase-like ATPases
RK51_022960	SM00342	helix_turn_helix, arabinose operon control protein
RK51_022985	SM00849	Metallo-beta-lactamase superfamily
RK51_023025	SM00382	ATPases associated with a variety of cellular activities
RK51_023065	SM00028	Tetratricopeptide repeats
RK51_023100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_023100	SM00387	Histidine kinase-like ATPases
RK51_023100	SM00388	His Kinase A (phosphoacceptor) domain
RK51_023105	SM00448	cheY-homologous receiver domain
RK51_023105	SM00862	Transcriptional regulatory protein, C terminal
RK51_023210	SM00382	ATPases associated with a variety of cellular activities
RK51_023240	SM00014	Acid phosphatase homologues
RK51_023260	SM00822	RK51_023260
RK51_023295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_023370	SM00506	Appr-1"-p processing enzyme
RK51_023425	SM00495	Chitin-binding domain type 3
RK51_023430	SM00344	helix_turn_helix ASNC type
RK51_023505	SM00346	helix_turn_helix isocitrate lyase regulation
RK51_023510	SM00116	Domain in cystathionine beta-synthase and other proteins.
RK51_023515	SM00479	RK51_023515
RK51_023530	SM00829	Enoylreductase
RK51_023545	SM00267	diguanylate cyclase
RK51_023565	SM00849	Metallo-beta-lactamase superfamily
RK51_023590	SM00267	diguanylate cyclase
RK51_023610	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RK51_023610	SM00495	Chitin-binding domain type 3
RK51_023610	SM00636	RK51_023610
RK51_023655	SM00342	helix_turn_helix, arabinose operon control protein
RK51_023655	SM01009	AlkA N-terminal domain
RK51_023715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_023720	SM00382	ATPases associated with a variety of cellular activities
RK51_023760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_023760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_023760	SM01049	RK51_023760
RK51_023775	SM00448	cheY-homologous receiver domain
RK51_023775	SM00850	LytTr DNA-binding domain
RK51_023780	SM00387	Histidine kinase-like ATPases
RK51_023800	SM00382	ATPases associated with a variety of cellular activities
RK51_023830	SM00387	Histidine kinase-like ATPases
RK51_023830	SM00388	His Kinase A (phosphoacceptor) domain
RK51_023830	SM00448	cheY-homologous receiver domain
RK51_023855	SM00382	ATPases associated with a variety of cellular activities
RK51_023860	SM00382	ATPases associated with a variety of cellular activities
RK51_023885	SM00470	ParB-like nuclease domain
RK51_023960	SM00382	ATPases associated with a variety of cellular activities
RK51_023965	SM00052	Putative diguanylate phosphodiesterase
RK51_023965	SM00267	diguanylate cyclase
RK51_023980	SM00448	cheY-homologous receiver domain
RK51_023985	SM00387	Histidine kinase-like ATPases
RK51_023985	SM00388	His Kinase A (phosphoacceptor) domain
RK51_023995	SM00421	helix_turn_helix, Lux Regulon
RK51_024005	SM00342	helix_turn_helix, arabinose operon control protein
RK51_024030	SM00360	RNA recognition motif
RK51_024055	SM00344	helix_turn_helix ASNC type
RK51_024065	SM00382	ATPases associated with a variety of cellular activities
RK51_024075	SM00342	helix_turn_helix, arabinose operon control protein
RK51_024135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RK51_024135	SM00895	RK51_024135
RK51_024145	SM00487	DEAD-like helicases superfamily
RK51_024145	SM00490	helicase superfamily c-terminal domain
RK51_024155	SM00342	helix_turn_helix, arabinose operon control protein
RK51_024160	SM00829	Enoylreductase
RK51_024175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_024235	SM00347	helix_turn_helix multiple antibiotic resistance protein
RK51_024255	SM00342	helix_turn_helix, arabinose operon control protein
RK51_024270	SM01007	Class II Aldolase and Adducin N-terminal domain
RK51_024285	SM00382	ATPases associated with a variety of cellular activities
RK51_024315	SM00448	cheY-homologous receiver domain
RK51_024315	SM00862	Transcriptional regulatory protein, C terminal
RK51_024320	SM00387	Histidine kinase-like ATPases
RK51_024380	SM00382	ATPases associated with a variety of cellular activities
RK51_024385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_024385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_024415	SM00857	Resolvase, N terminal domain
RK51_024420	SM00642	Alpha-amylase domain
RK51_024440	SM00642	Alpha-amylase domain
RK51_024455	SM00642	Alpha-amylase domain
RK51_024460	SM00671	Sel1-like repeats.
RK51_024480	SM00966	SpoVT / AbrB like domain 
RK51_024530	SM00421	helix_turn_helix, Lux Regulon
RK51_024555	SM00642	Alpha-amylase domain
RK51_024565	SM00642	Alpha-amylase domain
RK51_024630	SM00226	Low molecular weight phosphatase family
RK51_024660	SM00450	Rhodanese Homology Domain
RK51_024675	SM00936	Penicillin-binding protein 5, C-terminal domain 
RK51_024680	SM00642	Alpha-amylase domain
RK51_024685	SM00342	helix_turn_helix, arabinose operon control protein
RK51_024830	SM00422	helix_turn_helix, mercury resistance
RK51_024955	SM00382	ATPases associated with a variety of cellular activities
RK51_024980	SM00382	ATPases associated with a variety of cellular activities
RK51_024990	SM00020	Trypsin-like serine protease
RK51_025010	SM00481	DNA polymerase alpha chain like domain
RK51_025065	SM00448	cheY-homologous receiver domain
RK51_025065	SM00862	Transcriptional regulatory protein, C terminal
RK51_025070	SM00388	His Kinase A (phosphoacceptor) domain
RK51_025085	SM00062	Bacterial periplasmic substrate-binding proteins
RK51_025090	SM00052	Putative diguanylate phosphodiesterase
RK51_025090	SM00267	diguanylate cyclase
RK51_025100	SM00829	Enoylreductase
RK51_025105	SM00972	Spore Coat Protein U domain
RK51_025125	SM00972	Spore Coat Protein U domain
RK51_025130	SM01057	Eukaryotic-type carbonic anhydrase
RK51_025165	SM00382	ATPases associated with a variety of cellular activities
RK51_025180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_025180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_025230	SM00382	ATPases associated with a variety of cellular activities
RK51_025250	SM00267	diguanylate cyclase
RK51_025255	SM00028	Tetratricopeptide repeats
RK51_025280	SM00422	helix_turn_helix, mercury resistance
RK51_025290	SM00257	Lysin motif
RK51_025300	SM00487	DEAD-like helicases superfamily
RK51_025300	SM00490	helicase superfamily c-terminal domain
RK51_025330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_025330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_025350	SM00382	ATPases associated with a variety of cellular activities
RK51_025355	SM00267	diguanylate cyclase
RK51_025365	SM00327	von Willebrand factor (vWF) type A domain
RK51_025370	SM00327	von Willebrand factor (vWF) type A domain
RK51_025395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RK51_025395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RK51_025405	SM00421	helix_turn_helix, Lux Regulon
RK51_025410	SM00421	helix_turn_helix, Lux Regulon
RK51_025420	SM00382	ATPases associated with a variety of cellular activities
RK51_025460	SM00382	ATPases associated with a variety of cellular activities
RK51_025470	SM00382	ATPases associated with a variety of cellular activities
RK51_025475	SM00387	Histidine kinase-like ATPases
RK51_025475	SM00388	His Kinase A (phosphoacceptor) domain
RK51_025480	SM00448	cheY-homologous receiver domain
RK51_025480	SM00862	Transcriptional regulatory protein, C terminal
RK51_025495	SM00052	Putative diguanylate phosphodiesterase
RK51_025525	SM00342	helix_turn_helix, arabinose operon control protein
RK51_025550	SM01060	RK51_025550
RK51_025560	SM00829	Enoylreductase
RK51_025570	SM01022	RK51_025570
