locus-tag class description D0871_00010 PF11638 DnaA N-terminal domain D0871_00010 PF00308 Bacterial dnaA protein D0871_00010 PF08299 Bacterial dnaA protein helix-turn-helix D0871_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain D0871_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain D0871_00015 PF02767 DNA polymerase III beta subunit, central domain D0871_00020 PF02463 RecF/RecN/SMC N terminal domain D0871_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_00025 PF00204 DNA gyrase B D0871_00025 PF00986 DNA gyrase B subunit, carboxyl terminus D0871_00025 PF18053 DNA gyrase B subunit insert domain D0871_00025 PF01751 Toprim domain D0871_00045 PF00011 Hsp20/alpha crystallin family D0871_00050 PF00155 Aminotransferase class I and II D0871_00055 PF00128 Alpha amylase, catalytic domain D0871_00060 PF05746 DALR anticodon binding domain D0871_00060 PF02092 Glycyl-tRNA synthetase beta subunit D0871_00065 PF02091 Glycyl-tRNA synthetase alpha subunit D0871_00070 PF01169 Uncharacterized protein family UPF0016 D0871_00080 PF01206 Sulfurtransferase TusA D0871_00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_00090 PF03466 LysR substrate binding domain D0871_00095 PF08240 Alcohol dehydrogenase GroES-like domain D0871_00095 PF00107 Zinc-binding dehydrogenase D0871_00100 PF00108 Thiolase, N-terminal domain D0871_00100 PF02803 Thiolase, C-terminal domain D0871_00105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0871_00105 PF00378 Enoyl-CoA hydratase/isomerase D0871_00105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0871_00110 PF09186 Domain of unknown function (DUF1949) D0871_00110 PF01205 Uncharacterized protein family UPF0029 D0871_00115 PF02386 Cation transport protein D0871_00120 PF12724 Flavodoxin domain D0871_00170 PF00589 Phage integrase family D0871_00170 PF13356 Arm DNA-binding domain D0871_00180 PF13099 Domain of unknown function (DUF3944) D0871_00180 PF03981 Ubiquinol-cytochrome C chaperone D0871_00185 PF04002 RadC-like JAB domain D0871_00295 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_00295 PF17871 AAA lid domain D0871_00295 PF00004 ATPase family associated with various cellular activities (AAA) D0871_00295 PF07724 AAA domain (Cdc48 subfamily) D0871_00330 PF05638 Type VI secretion system effector, Hcp D0871_00340 PF04717 Type VI secretion system, phage-baseplate injector D0871_00340 PF16671 Actin cross-linking domain D0871_00370 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0871_00370 PF12008 Type I restriction and modification enzyme - subunit R C terminal D0871_00370 PF18766 SWI2/SNF2 ATPase D0871_00380 PF01420 Type I restriction modification DNA specificity domain D0871_00385 PF12161 HsdM N-terminal domain D0871_00385 PF02384 N-6 DNA Methylase D0871_00425 PF00075 RNase H D0871_00460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0871_00465 PF13667 ThiC-associated domain D0871_00465 PF01964 Radical SAM ThiC family D0871_00470 PF02581 Thiamine monophosphate synthase D0871_00475 PF00899 ThiF family D0871_00480 PF02597 ThiS family D0871_00485 PF05690 Thiazole biosynthesis protein ThiG D0871_00490 PF06968 Biotin and Thiamin Synthesis associated domain D0871_00490 PF04055 Radical SAM superfamily D0871_00495 PF01321 Creatinase/Prolidase N-terminal domain D0871_00495 PF00557 Metallopeptidase family M24 D0871_00495 PF01321 Creatinase/Prolidase N-terminal domain D0871_00495 PF00557 Metallopeptidase family M24 D0871_00500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_00500 PF03466 LysR substrate binding domain D0871_00505 PF07690 Major Facilitator Superfamily D0871_00525 PF05114 Protein of unknown function (DUF692) D0871_00535 PF13361 UvrD-like helicase C-terminal domain D0871_00535 PF00580 UvrD/REP helicase N-terminal domain D0871_00550 PF01810 LysE type translocator D0871_00560 PF00892 EamA-like transporter family D0871_00565 PF00570 HRDC domain D0871_00565 PF00271 Helicase conserved C-terminal domain D0871_00565 PF00270 DEAD/DEAH box helicase D0871_00565 PF16124 RecQ zinc-binding D0871_00565 PF09382 RQC domain D0871_00580 PF02592 Putative vitamin uptake transporter D0871_00585 PF02541 Ppx/GppA phosphatase family D0871_00590 PF00270 DEAD/DEAH box helicase D0871_00590 PF00271 Helicase conserved C-terminal domain D0871_00595 PF00085 Thioredoxin D0871_00600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_00600 PF07498 Rho termination factor, N-terminal domain D0871_00600 PF07497 Rho termination factor, RNA-binding domain D0871_00615 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0871_00620 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_00625 PF00175 Oxidoreductase NAD-binding domain D0871_00675 PF07219 HemY protein N-terminus D0871_00680 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0871_00685 PF02602 Uroporphyrinogen-III synthase HemD D0871_00690 PF03900 Porphobilinogen deaminase, C-terminal domain D0871_00690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0871_00695 PF12633 Adenylate cyclase NT domain D0871_00695 PF01295 Adenylate cyclase, class-I D0871_00700 PF01491 Frataxin-like domain D0871_00710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0871_00710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0871_00715 PF01678 Diaminopimelate epimerase D0871_00725 PF00589 Phage integrase family D0871_00725 PF02899 Phage integrase, N-terminal SAM-like domain D0871_00730 PF13419 Haloacid dehalogenase-like hydrolase D0871_00735 PF10442 FIST C domain D0871_00735 PF08495 FIST N domain D0871_00735 PF00990 Diguanylate cyclase, GGDEF domain D0871_00735 PF00563 EAL domain D0871_00765 PF12146 Serine aminopeptidase, S33 D0871_00770 PF01810 LysE type translocator D0871_00775 PF08668 HDOD domain D0871_00775 PF00563 EAL domain D0871_00780 PF01022 Bacterial regulatory protein, arsR family D0871_00785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0871_00785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0871_00840 PF01914 MarC family integral membrane protein D0871_00855 PF00448 SRP54-type protein, GTPase domain D0871_00855 PF02881 SRP54-type protein, helical bundle domain D0871_00860 PF00005 ABC transporter D0871_00865 PF18075 FtsX extracellular domain D0871_00870 PF00140 Sigma-70 factor, region 1.2 D0871_00870 PF04545 Sigma-70, region 4 D0871_00870 PF04542 Sigma-70 region 2 D0871_00880 PF00581 Rhodanese-like domain D0871_00885 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0871_00885 PF01694 Rhomboid family D0871_00890 PF03748 Flagellar basal body-associated protein FliL D0871_00895 PF04345 Chorismate lyase D0871_00900 PF01040 UbiA prenyltransferase family D0871_00905 PF01553 Acyltransferase D0871_00920 PF01726 LexA DNA binding domain D0871_00920 PF00717 Peptidase S24-like D0871_00925 PF04072 Leucine carboxyl methyltransferase D0871_00930 PF01554 MatE D0871_00935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0871_00935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_00940 PF00440 Bacterial regulatory proteins, tetR family D0871_00950 PF05958 tRNA (Uracil-5-)-methyltransferase D0871_00955 PF00593 TonB dependent receptor D0871_00955 PF07715 TonB-dependent Receptor Plug Domain D0871_00965 PF01177 Asp/Glu/Hydantoin racemase D0871_01030 PF13091 PLD-like domain D0871_01040 PF01565 FAD binding domain D0871_01040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D0871_01045 PF08279 HTH domain D0871_01045 PF03099 Biotin/lipoate A/B protein ligase family D0871_01045 PF02237 Biotin protein ligase C terminal domain D0871_01050 PF00485 Phosphoribulokinase / Uridine kinase family D0871_01080 PF00009 Elongation factor Tu GTP binding domain D0871_01080 PF03143 Elongation factor Tu C-terminal domain D0871_01080 PF03144 Elongation factor Tu domain 2 D0871_01090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0871_01095 PF00467 KOW motif D0871_01095 PF02357 Transcription termination factor nusG D0871_01100 PF00298 Ribosomal protein L11, RNA binding domain D0871_01100 PF03946 Ribosomal protein L11, N-terminal domain D0871_01105 PF00687 Ribosomal protein L1p/L10e family D0871_01110 PF00466 Ribosomal protein L10 D0871_01115 PF00542 Ribosomal protein L7/L12 C-terminal domain D0871_01115 PF16320 Ribosomal protein L7/L12 dimerisation domain D0871_01120 PF04565 RNA polymerase Rpb2, domain 3 D0871_01120 PF04563 RNA polymerase beta subunit D0871_01120 PF04561 RNA polymerase Rpb2, domain 2 D0871_01120 PF10385 RNA polymerase beta subunit external 1 domain D0871_01120 PF00562 RNA polymerase Rpb2, domain 6 D0871_01120 PF04560 RNA polymerase Rpb2, domain 7 D0871_01125 PF05000 RNA polymerase Rpb1, domain 4 D0871_01125 PF04998 RNA polymerase Rpb1, domain 5 D0871_01125 PF04997 RNA polymerase Rpb1, domain 1 D0871_01125 PF00623 RNA polymerase Rpb1, domain 2 D0871_01125 PF04983 RNA polymerase Rpb1, domain 3 D0871_01130 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0871_01135 PF09297 NADH pyrophosphatase zinc ribbon domain D0871_01135 PF00293 NUDIX domain D0871_01150 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0871_01155 PF03167 Uracil DNA glycosylase superfamily D0871_01160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0871_01165 PF04222 Protein of unknown function (DUF416) D0871_01170 PF01595 Cyclin M transmembrane N-terminal domain D0871_01170 PF00571 CBS domain D0871_01175 PF00216 Bacterial DNA-binding protein D0871_01185 PF02843 Phosphoribosylglycinamide synthetase, C domain D0871_01185 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0871_01185 PF02844 Phosphoribosylglycinamide synthetase, N domain D0871_01195 PF02142 MGS-like domain D0871_01195 PF01808 AICARFT/IMPCHase bienzyme D0871_01205 PF13411 MerR HTH family regulatory protein D0871_01210 PF00486 Transcriptional regulatory protein, C terminal D0871_01210 PF18500 CadC C-terminal domain 1 D0871_01220 PF13520 Amino acid permease D0871_01225 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0871_01225 PF01276 Orn/Lys/Arg decarboxylase, major domain D0871_01225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0871_01295 PF13358 DDE superfamily endonuclease D0871_01305 PF05230 MASE2 domain D0871_01305 PF00990 Diguanylate cyclase, GGDEF domain D0871_01310 PF00005 ABC transporter D0871_01310 PF12848 ABC transporter D0871_01315 PF07690 Major Facilitator Superfamily D0871_01320 PF02954 Bacterial regulatory protein, Fis family D0871_01325 PF01207 Dihydrouridine synthase (Dus) D0871_01340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0871_01340 PF00289 Biotin carboxylase, N-terminal domain D0871_01340 PF02785 Biotin carboxylase C-terminal domain D0871_01345 PF00364 Biotin-requiring enzyme D0871_01350 PF01220 Dehydroquinase class II D0871_01355 PF16177 Acetyl-coenzyme A synthetase N-terminus D0871_01355 PF13193 AMP-binding enzyme C-terminal domain D0871_01355 PF00501 AMP-binding enzyme D0871_01370 PF12832 MFS_1 like family D0871_01375 PF00072 Response regulator receiver domain D0871_01375 PF09308 LuxQ, periplasmic D0871_01375 PF00512 His Kinase A (phospho-acceptor) domain D0871_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_01380 PF00206 Lyase D0871_01380 PF10415 Fumarase C C-terminus D0871_01400 PF00474 Sodium:solute symporter family D0871_01410 PF03471 Transporter associated domain D0871_01410 PF00999 Sodium/hydrogen exchanger family D0871_01410 PF02080 TrkA-C domain D0871_01415 PF00072 Response regulator receiver domain D0871_01415 PF00196 Bacterial regulatory proteins, luxR family D0871_01420 PF02683 Cytochrome C biogenesis protein transmembrane region D0871_01420 PF11412 Disulphide bond corrector protein DsbC D0871_01425 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0871_01430 PF00206 Lyase D0871_01430 PF10415 Fumarase C C-terminus D0871_01435 PF04186 FxsA cytoplasmic membrane protein D0871_01440 PF00588 SpoU rRNA Methylase family D0871_01445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0871_01445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0871_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_01450 PF00512 His Kinase A (phospho-acceptor) domain D0871_01450 PF00672 HAMP domain D0871_01450 PF16527 Two-component sensor protein CpxA, periplasmic domain D0871_01455 PF00072 Response regulator receiver domain D0871_01455 PF00486 Transcriptional regulatory protein, C terminal D0871_01465 PF07813 LTXXQ motif family protein D0871_01470 PF16916 Dimerisation domain of Zinc Transporter D0871_01470 PF01545 Cation efflux family D0871_01475 PF00365 Phosphofructokinase D0871_01480 PF01554 MatE D0871_01485 PF00166 Chaperonin 10 Kd subunit D0871_01490 PF00118 TCP-1/cpn60 chaperonin family D0871_01500 PF02308 MgtC family D0871_01510 PF01168 Alanine racemase, N-terminal domain D0871_01510 PF00842 Alanine racemase, C-terminal domain D0871_01520 PF04055 Radical SAM superfamily D0871_01525 PF01132 Elongation factor P (EF-P) OB domain D0871_01525 PF08207 Elongation factor P (EF-P) KOW-like domain D0871_01525 PF09285 Elongation factor P, C-terminal D0871_01535 PF02313 Fumarate reductase subunit D D0871_01540 PF02300 Fumarate reductase subunit C D0871_01545 PF13085 2Fe-2S iron-sulfur cluster binding domain D0871_01545 PF13183 4Fe-4S dicluster domain D0871_01550 PF00890 FAD binding domain D0871_01550 PF02910 Fumarate reductase flavoprotein C-term D0871_01560 PF00152 tRNA synthetases class II (D, K and N) D0871_01570 PF00440 Bacterial regulatory proteins, tetR family D0871_01570 PF08360 QacR-like protein, C-terminal region D0871_01580 PF01551 Peptidase family M23 D0871_01585 PF06426 Serine acetyltransferase, N-terminal D0871_01585 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_01590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0871_01590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0871_01595 PF02556 Preprotein translocase subunit SecB D0871_01600 PF00581 Rhodanese-like domain D0871_01605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0871_01605 PF01676 Metalloenzyme superfamily D0871_01615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_01615 PF00672 HAMP domain D0871_01620 PF00939 Sodium:sulfate symporter transmembrane region D0871_01625 PF02666 Phosphatidylserine decarboxylase D0871_01630 PF03193 RsgA GTPase D0871_01635 PF00929 Exonuclease D0871_01705 PF08331 Domain of unknown function (DUF1730) D0871_01710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0871_01715 PF01520 N-acetylmuramoyl-L-alanine amidase D0871_01720 PF08676 MutL C terminal dimerisation domain D0871_01720 PF01119 DNA mismatch repair protein, C-terminal domain D0871_01730 PF17209 Hfq protein D0871_01735 PF13167 GTP-binding GTPase N-terminal D0871_01735 PF01926 50S ribosome-binding GTPase D0871_01735 PF16360 GTP-binding GTPase Middle Region D0871_01740 PF12221 Bacterial membrane protein N terminal D0871_01740 PF01145 SPFH domain / Band 7 family D0871_01745 PF01145 SPFH domain / Band 7 family D0871_01750 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0871_01755 PF00709 Adenylosuccinate synthetase D0871_01765 PF08238 Sel1 repeat D0871_01770 PF00970 Oxidoreductase FAD-binding domain D0871_01770 PF00042 Globin D0871_01770 PF00175 Oxidoreductase NAD-binding domain D0871_01775 PF02082 Transcriptional regulator D0871_01780 PF08461 Ribonuclease R winged-helix domain D0871_01780 PF00773 RNB domain D0871_01780 PF08206 Ribonuclease B OB domain D0871_01780 PF17876 Cold shock domain D0871_01780 PF00575 S1 RNA binding domain D0871_01785 PF00588 SpoU rRNA Methylase family D0871_01785 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0871_01790 PF13419 Haloacid dehalogenase-like hydrolase D0871_01795 PF00579 tRNA synthetases class I (W and Y) D0871_01825 PF00117 Glutamine amidotransferase class-I D0871_01830 PF00202 Aminotransferase class-III D0871_01835 PF04958 Arginine N-succinyltransferase beta subunit D0871_01840 PF00171 Aldehyde dehydrogenase family D0871_01850 PF00027 Cyclic nucleotide-binding domain D0871_01850 PF13545 Crp-like helix-turn-helix domain D0871_01855 PF00485 Phosphoribulokinase / Uridine kinase family D0871_01860 PF06794 Uncharacterised protein family (UPF0270) D0871_01865 PF00561 alpha/beta hydrolase fold D0871_01875 PF12848 ABC transporter D0871_01875 PF00005 ABC transporter D0871_01885 PF02525 Flavodoxin-like fold D0871_01890 PF02254 TrkA-N domain D0871_01890 PF00999 Sodium/hydrogen exchanger family D0871_01900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_01910 PF01112 Asparaginase D0871_01915 PF04102 SlyX D0871_01925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0871_01925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_01930 PF08348 YheO-like PAS domain D0871_01930 PF13309 HTH domain D0871_01935 PF02635 DsrE/DsrF-like family D0871_01940 PF02635 DsrE/DsrF-like family D0871_01945 PF04077 DsrH like protein D0871_01950 PF00164 Ribosomal protein S12/S23 D0871_01955 PF00177 Ribosomal protein S7p/S5e D0871_01960 PF00679 Elongation factor G C-terminus D0871_01960 PF14492 Elongation Factor G, domain II D0871_01960 PF03764 Elongation factor G, domain IV D0871_01960 PF00009 Elongation factor Tu GTP binding domain D0871_01960 PF03144 Elongation factor Tu domain 2 D0871_01965 PF03143 Elongation factor Tu C-terminal domain D0871_01965 PF00009 Elongation factor Tu GTP binding domain D0871_01965 PF03144 Elongation factor Tu domain 2 D0871_01970 PF04324 BFD-like [2Fe-2S] binding domain D0871_01975 PF00210 Ferritin-like domain D0871_01980 PF03949 Malic enzyme, NAD binding domain D0871_01980 PF00390 Malic enzyme, N-terminal domain D0871_01985 PF01340 Met Apo-repressor, MetJ D0871_01990 PF01053 Cys/Met metabolism PLP-dependent enzyme D0871_01995 PF03447 Homoserine dehydrogenase, NAD binding domain D0871_01995 PF00696 Amino acid kinase family D0871_01995 PF00742 Homoserine dehydrogenase D0871_02000 PF02219 Methylenetetrahydrofolate reductase D0871_02010 PF00311 Phosphoenolpyruvate carboxylase D0871_02015 PF01546 Peptidase family M20/M25/M40 D0871_02015 PF07687 Peptidase dimerisation domain D0871_02020 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0871_02020 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0871_02025 PF00696 Amino acid kinase family D0871_02030 PF00764 Arginosuccinate synthase D0871_02035 PF14698 Argininosuccinate lyase C-terminal D0871_02035 PF00206 Lyase D0871_02035 PF00583 Acetyltransferase (GNAT) family D0871_02050 PF08534 Redoxin D0871_02050 PF00462 Glutaredoxin D0871_02055 PF03466 LysR substrate binding domain D0871_02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_02060 PF00905 Penicillin binding protein transpeptidase domain D0871_02060 PF00912 Transglycosylase D0871_02060 PF17092 Penicillin-binding protein OB-like domain D0871_02085 PF11741 AMIN domain D0871_02085 PF00263 Bacterial type II and III secretion system protein D0871_02085 PF03958 Bacterial type II/III secretion system short domain D0871_02085 PF07660 Secretin and TonB N terminus short domain D0871_02090 PF01202 Shikimate kinase D0871_02095 PF01761 3-dehydroquinate synthase D0871_02105 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0871_02110 PF00834 Ribulose-phosphate 3 epimerase family D0871_02115 PF01250 Ribosomal protein S6 D0871_02120 PF00436 Single-strand binding protein family D0871_02125 PF01084 Ribosomal protein S18 D0871_02130 PF01281 Ribosomal protein L9, N-terminal domain D0871_02130 PF03948 Ribosomal protein L9, C-terminal domain D0871_02140 PF03796 DnaB-like helicase C terminal domain D0871_02140 PF00772 DnaB-like helicase N terminal domain D0871_02145 PF00842 Alanine racemase, C-terminal domain D0871_02145 PF01168 Alanine racemase, N-terminal domain D0871_02155 PF01894 Uncharacterised protein family UPF0047 D0871_02160 PF00342 Phosphoglucose isomerase D0871_02170 PF01475 Ferric uptake regulator family D0871_02180 PF01207 Dihydrouridine synthase (Dus) D0871_02205 PF00667 FAD binding domain D0871_02205 PF00258 Flavodoxin D0871_02205 PF00175 Oxidoreductase NAD-binding domain D0871_02210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0871_02210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0871_02215 PF01507 Phosphoadenosine phosphosulfate reductase family D0871_02285 PF13358 DDE superfamily endonuclease D0871_02305 PF00999 Sodium/hydrogen exchanger family D0871_02310 PF00809 Pterin binding enzyme D0871_02310 PF02310 B12 binding domain D0871_02310 PF02607 B12 binding domain D0871_02310 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0871_02310 PF02574 Homocysteine S-methyltransferase D0871_02315 PF01842 ACT domain D0871_02315 PF00696 Amino acid kinase family D0871_02325 PF00266 Aminotransferase class-V D0871_02335 PF17760 UvrA interaction domain D0871_02335 PF17755 UvrA DNA-binding domain D0871_02335 PF00005 ABC transporter D0871_02340 PF00483 Nucleotidyl transferase D0871_02345 PF00196 Bacterial regulatory proteins, luxR family D0871_02350 PF00436 Single-strand binding protein family D0871_02355 PF00990 Diguanylate cyclase, GGDEF domain D0871_02355 PF00563 EAL domain D0871_02355 PF17157 Gammaproteobacterial periplasmic sensor domain D0871_02375 PF03958 Bacterial type II/III secretion system short domain D0871_02375 PF11741 AMIN domain D0871_02375 PF07660 Secretin and TonB N terminus short domain D0871_02375 PF00263 Bacterial type II and III secretion system protein D0871_02380 PF13401 AAA domain D0871_02380 PF01471 Putative peptidoglycan binding domain D0871_02390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0871_02390 PF00437 Type II/IV secretion system protein D0871_02395 PF00482 Type II secretion system (T2SS), protein F D0871_02405 PF07963 Prokaryotic N-terminal methylation motif D0871_02405 PF00114 Pilin (bacterial filament) D0871_02445 PF04085 rod shape-determining protein MreC D0871_02450 PF04093 rod shape-determining protein MreD D0871_02455 PF02545 Maf-like protein D0871_02460 PF00575 S1 RNA binding domain D0871_02460 PF10150 Ribonuclease E/G family D0871_02465 PF13116 Protein of unknown function D0871_02465 PF13502 AsmA-like C-terminal region D0871_02470 PF00795 Carbon-nitrogen hydrolase D0871_02475 PF01523 Putative modulator of DNA gyrase D0871_02480 PF02562 PhoH-like protein D0871_02480 PF13638 PIN domain D0871_02485 PF12137 RNA polymerase recycling family C-terminal D0871_02485 PF18337 RapA N-terminal Tudor like domain D0871_02485 PF00271 Helicase conserved C-terminal domain D0871_02485 PF00176 SNF2 family N-terminal domain D0871_02485 PF18339 RapA N-terminal Tudor like domain 1 D0871_02500 PF00849 RNA pseudouridylate synthase D0871_02505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0871_02505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0871_02510 PF04751 Protein of unknown function (DUF615) D0871_02515 PF01523 Putative modulator of DNA gyrase D0871_02520 PF00571 CBS domain D0871_02520 PF03448 MgtE intracellular N domain D0871_02520 PF01769 Divalent cation transporter D0871_02525 PF00381 PTS HPr component phosphorylation site D0871_02530 PF03668 P-loop ATPase protein family D0871_02535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_02540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0871_02545 PF04963 Sigma-54 factor, core binding domain D0871_02545 PF04552 Sigma-54, DNA binding domain D0871_02545 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0871_02550 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0871_02550 PF00005 ABC transporter D0871_02555 PF03968 OstA-like protein D0871_02565 PF00571 CBS domain D0871_02565 PF01380 SIS domain D0871_02570 PF01699 Sodium/calcium exchanger protein D0871_02575 PF00005 ABC transporter D0871_02580 PF02405 Permease MlaE D0871_02585 PF02470 MlaD protein D0871_02590 PF05494 MlaC protein D0871_02600 PF01722 BolA-like protein D0871_02605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0871_02610 PF01553 Acyltransferase D0871_02615 PF01042 Endoribonuclease L-PSP D0871_02620 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0871_02620 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0871_02625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0871_02625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0871_02635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0871_02635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0871_02650 PF06877 Regulator of ribonuclease activity B D0871_02660 PF00583 Acetyltransferase (GNAT) family D0871_02670 PF08264 Anticodon-binding domain of tRNA D0871_02670 PF00133 tRNA synthetases class I (I, L, M and V) D0871_02670 PF10458 Valyl tRNA synthetase tRNA binding arm D0871_02675 PF04364 DNA polymerase III chi subunit, HolC D0871_02680 PF02789 Cytosol aminopeptidase family, N-terminal domain D0871_02680 PF00883 Cytosol aminopeptidase family, catalytic domain D0871_02685 PF03739 Lipopolysaccharide export system permease LptF/LptG D0871_02690 PF03739 Lipopolysaccharide export system permease LptF/LptG D0871_02700 PF10011 Predicted membrane protein (DUF2254) D0871_02705 PF00106 short chain dehydrogenase D0871_02720 PF01522 Polysaccharide deacetylase D0871_02725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_02730 PF02378 Phosphotransferase system, EIIC D0871_02735 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0871_02740 PF02056 Family 4 glycosyl hydrolase D0871_02740 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0871_02745 PF04794 YdjC-like protein D0871_02750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0871_02750 PF00356 Bacterial regulatory proteins, lacI family D0871_02755 PF00072 Response regulator receiver domain D0871_02800 PF00171 Aldehyde dehydrogenase family D0871_02830 PF00672 HAMP domain D0871_02830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_02830 PF17200 Single Cache domain 2 D0871_02870 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0871_02870 PF01464 Transglycosylase SLT domain D0871_02875 PF04362 Bacterial Fe(2+) trafficking D0871_02880 PF14815 NUDIX domain D0871_02880 PF00730 HhH-GPD superfamily base excision DNA repair protein D0871_02880 PF00633 Helix-hairpin-helix motif D0871_02885 PF02390 Putative methyltransferase D0871_02890 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0871_02895 PF04960 Glutaminase D0871_02900 PF04055 Radical SAM superfamily D0871_02900 PF06969 HemN C-terminal domain D0871_02905 PF01725 Ham1 family D0871_02915 PF02594 Uncharacterised ACR, YggU family COG1872 D0871_02920 PF02325 YGGT family D0871_02925 PF03807 NADP oxidoreductase coenzyme F420-dependent D0871_02925 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0871_02930 PF01168 Alanine racemase, N-terminal domain D0871_02935 PF00437 Type II/IV secretion system protein D0871_02940 PF00437 Type II/IV secretion system protein D0871_02945 PF03652 Holliday junction resolvase D0871_02950 PF02622 Uncharacterized ACR, COG1678 D0871_02955 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0871_02955 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0871_02960 PF04452 RNA methyltransferase D0871_02965 PF04231 Endonuclease I D0871_02970 PF17283 SprT-like zinc ribbon domain D0871_02970 PF10263 SprT-like family D0871_02980 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0871_02980 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0871_02980 PF02772 S-adenosylmethionine synthetase, central domain D0871_02990 PF02780 Transketolase, C-terminal domain D0871_02990 PF02779 Transketolase, pyrimidine binding domain D0871_02990 PF00456 Transketolase, thiamine diphosphate binding domain D0871_02995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_02995 PF03466 LysR substrate binding domain D0871_03000 PF00593 TonB dependent receptor D0871_03000 PF07715 TonB-dependent Receptor Plug Domain D0871_03005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0871_03005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0871_03010 PF00162 Phosphoglycerate kinase D0871_03015 PF01116 Fructose-bisphosphate aldolase class-II D0871_03020 PF00924 Mechanosensitive ion channel D0871_03020 PF05552 Conserved TM helix D0871_03025 PF04073 Aminoacyl-tRNA editing domain D0871_03030 PF01810 LysE type translocator D0871_03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_03035 PF03466 LysR substrate binding domain D0871_03040 PF04402 Protein of unknown function (DUF541) D0871_03045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0871_03045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0871_03045 PF01842 ACT domain D0871_03050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0871_03055 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0871_03065 PF05164 Cell division protein ZapA D0871_03075 PF03695 Uncharacterised protein family (UPF0149) D0871_03080 PF01494 FAD binding domain D0871_03085 PF01494 FAD binding domain D0871_03100 PF01571 Aminomethyltransferase folate-binding domain D0871_03105 PF03937 Flavinator of succinate dehydrogenase D0871_03115 PF00890 FAD binding domain D0871_03115 PF02910 Fumarate reductase flavoprotein C-term D0871_03125 PF04542 Sigma-70 region 2 D0871_03125 PF08281 Sigma-70, region 4 D0871_03130 PF03873 Anti sigma-E protein RseA, C-terminal domain D0871_03130 PF03872 Anti sigma-E protein RseA, N-terminal domain D0871_03135 PF03888 MucB/RseB N-terminal domain D0871_03135 PF17188 MucB/RseB C-terminal domain D0871_03145 PF03144 Elongation factor Tu domain 2 D0871_03145 PF00009 Elongation factor Tu GTP binding domain D0871_03145 PF00679 Elongation factor G C-terminus D0871_03145 PF06421 GTP-binding protein LepA C-terminus D0871_03150 PF10502 Signal peptidase, peptidase S26 D0871_03155 PF14622 Ribonuclease-III-like D0871_03155 PF00035 Double-stranded RNA binding motif D0871_03160 PF07650 KH domain D0871_03160 PF01926 50S ribosome-binding GTPase D0871_03165 PF02565 Recombination protein O C terminal D0871_03165 PF11967 Recombination protein O N terminal D0871_03170 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0871_03175 PF01648 4'-phosphopantetheinyl transferase superfamily D0871_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_03180 PF00672 HAMP domain D0871_03180 PF00512 His Kinase A (phospho-acceptor) domain D0871_03180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0871_03180 PF00072 Response regulator receiver domain D0871_03180 PF01627 Hpt domain D0871_03190 PF05958 tRNA (Uracil-5-)-methyltransferase D0871_03190 PF01938 TRAM domain D0871_03200 PF13291 ACT domain D0871_03200 PF04607 Region found in RelA / SpoT proteins D0871_03200 PF02824 TGS domain D0871_03205 PF03819 MazG nucleotide pyrophosphohydrolase domain D0871_03210 PF00117 Glutamine amidotransferase class-I D0871_03210 PF06418 CTP synthase N-terminus D0871_03215 PF03952 Enolase, N-terminal domain D0871_03215 PF00113 Enolase, C-terminal TIM barrel domain D0871_03220 PF04977 Septum formation initiator D0871_03225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0871_03230 PF02542 YgbB family D0871_03235 PF01142 tRNA pseudouridine synthase D (TruD) D0871_03240 PF01975 Survival protein SurE D0871_03250 PF01551 Peptidase family M23 D0871_03250 PF01476 LysM domain D0871_03260 PF01624 MutS domain I D0871_03260 PF05188 MutS domain II D0871_03260 PF05192 MutS domain III D0871_03260 PF05190 MutS family domain IV D0871_03260 PF00488 MutS domain V D0871_03265 PF02464 Competence-damaged protein D0871_03270 PF00154 recA bacterial DNA recombination protein D0871_03275 PF02631 RecX family D0871_03280 PF02272 DHHA1 domain D0871_03280 PF01411 tRNA synthetases class II (A) D0871_03280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0871_03285 PF13840 ACT domain D0871_03285 PF01842 ACT domain D0871_03285 PF00696 Amino acid kinase family D0871_03290 PF02599 Global regulator protein family D0871_03345 PF04277 Oxaloacetate decarboxylase, gamma chain D0871_03350 PF02436 Conserved carboxylase domain D0871_03350 PF00682 HMGL-like D0871_03350 PF00364 Biotin-requiring enzyme D0871_03355 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0871_03360 PF08240 Alcohol dehydrogenase GroES-like domain D0871_03360 PF00107 Zinc-binding dehydrogenase D0871_03365 PF09335 SNARE associated Golgi protein D0871_03370 PF05193 Peptidase M16 inactive domain D0871_03370 PF00675 Insulinase (Peptidase family M16) D0871_03375 PF04262 Glutamate-cysteine ligase D0871_03385 PF02664 S-Ribosylhomocysteinase (LuxS) D0871_03390 PF00571 CBS domain D0871_03390 PF01595 Cyclin M transmembrane N-terminal domain D0871_03390 PF03471 Transporter associated domain D0871_03395 PF01578 Cytochrome C assembly protein D0871_03400 PF02978 Signal peptide binding domain D0871_03400 PF00448 SRP54-type protein, GTPase domain D0871_03400 PF02881 SRP54-type protein, helical bundle domain D0871_03405 PF00886 Ribosomal protein S16 D0871_03410 PF05239 PRC-barrel domain D0871_03410 PF01782 RimM N-terminal domain D0871_03415 PF01746 tRNA (Guanine-1)-methyltransferase D0871_03420 PF01245 Ribosomal protein L19 D0871_03425 PF03884 DNA gyrase inhibitor YacG D0871_03430 PF07072 Cell division protein D0871_03435 PF01121 Dephospho-CoA kinase D0871_03440 PF06750 Bacterial Peptidase A24 N-terminal domain D0871_03440 PF01478 Type IV leader peptidase family D0871_03445 PF00482 Type II secretion system (T2SS), protein F D0871_03450 PF00437 Type II/IV secretion system protein D0871_03450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0871_03460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0871_03460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0871_03465 PF01510 N-acetylmuramoyl-L-alanine amidase D0871_03470 PF07729 FCD domain D0871_03470 PF00392 Bacterial regulatory proteins, gntR family D0871_03475 PF17831 Pyruvate dehydrogenase E1 component middle domain D0871_03475 PF00456 Transketolase, thiamine diphosphate binding domain D0871_03480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0871_03480 PF02817 e3 binding domain D0871_03480 PF00364 Biotin-requiring enzyme D0871_03485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0871_03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_03490 PF00440 Bacterial regulatory proteins, tetR family D0871_03495 PF00156 Phosphoribosyl transferase domain D0871_03500 PF00484 Carbonic anhydrase D0871_03505 PF01740 STAS domain D0871_03505 PF00916 Sulfate permease family D0871_03515 PF00005 ABC transporter D0871_03520 PF01061 ABC-2 type transporter D0871_03530 PF03279 Bacterial lipid A biosynthesis acyltransferase D0871_03540 PF02569 Pantoate-beta-alanine ligase D0871_03545 PF02548 Ketopantoate hydroxymethyltransferase D0871_03550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0871_03555 PF12627 Probable RNA and SrmB- binding site of polymerase A D0871_03555 PF01743 Poly A polymerase head domain D0871_03555 PF12626 Polymerase A arginine-rich C-terminus D0871_03565 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0871_03575 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0871_03580 PF17746 SfsA N-terminal OB domain D0871_03580 PF03749 Sugar fermentation stimulation protein RE domain D0871_03585 PF08482 ATP-dependent helicase C-terminal D0871_03585 PF04408 Helicase associated domain (HA2) D0871_03585 PF00270 DEAD/DEAH box helicase D0871_03585 PF00271 Helicase conserved C-terminal domain D0871_03590 PF00912 Transglycosylase D0871_03590 PF00905 Penicillin binding protein transpeptidase domain D0871_03590 PF14814 Bifunctional transglycosylase second domain D0871_03595 PF01734 Patatin-like phospholipase D0871_03600 PF11791 Aconitate B N-terminal domain D0871_03600 PF06434 Aconitate hydratase 2 N-terminus D0871_03600 PF00330 Aconitase family (aconitate hydratase) D0871_03605 PF06062 Uncharacterised protein family (UPF0231) D0871_03610 PF00543 Nitrogen regulatory protein P-II D0871_03615 PF00909 Ammonium Transporter Family D0871_03620 PF13416 Bacterial extracellular solute-binding protein D0871_03630 PF08402 TOBE domain D0871_03630 PF00005 ABC transporter D0871_03635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0871_03635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0871_03635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0871_03635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0871_03640 PF06165 Glycosyltransferase family 36 D0871_03640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0871_03645 PF02838 Glycosyl hydrolase family 20, domain 2 D0871_03645 PF00728 Glycosyl hydrolase family 20, catalytic domain D0871_03650 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0871_03660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_03660 PF00005 ABC transporter D0871_03665 PF00005 ABC transporter D0871_03665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_03670 PF00528 Binding-protein-dependent transport system inner membrane component D0871_03670 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_03675 PF00528 Binding-protein-dependent transport system inner membrane component D0871_03680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_03685 PF00072 Response regulator receiver domain D0871_03685 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_03685 PF00512 His Kinase A (phospho-acceptor) domain D0871_03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_03695 PF08468 Methyltransferase small domain N-terminal D0871_03695 PF05175 Methyltransferase small domain D0871_03700 PF01594 AI-2E family transporter D0871_03705 PF00202 Aminotransferase class-III D0871_03710 PF01521 Iron-sulphur cluster biosynthesis D0871_03720 PF00873 AcrB/AcrD/AcrF family D0871_03725 PF01476 LysM domain D0871_03725 PF01551 Peptidase family M23 D0871_03725 PF08525 Opacity-associated protein A N-terminal motif D0871_03730 PF00579 tRNA synthetases class I (W and Y) D0871_03740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0871_03745 PF13609 Gram-negative porin D0871_03750 PF03449 Transcription elongation factor, N-terminal D0871_03750 PF01272 Transcription elongation factor, GreA/GreB, C-term D0871_03755 PF01985 CRS1 / YhbY (CRM) domain D0871_03760 PF01728 FtsJ-like methyltransferase D0871_03765 PF00004 ATPase family associated with various cellular activities (AAA) D0871_03765 PF17862 AAA+ lid domain D0871_03765 PF06480 FtsH Extracellular D0871_03765 PF01434 Peptidase family M41 D0871_03770 PF00809 Pterin binding enzyme D0871_03775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0871_03775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0871_03775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0871_03775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0871_03785 PF03840 Preprotein translocase SecG subunit D0871_03800 PF17384 RimP C-terminal SH3 domain D0871_03800 PF02576 RimP N-terminal domain D0871_03805 PF08529 NusA N-terminal domain D0871_03805 PF00575 S1 RNA binding domain D0871_03805 PF13184 NusA-like KH domain D0871_03810 PF11987 Translation-initiation factor 2 D0871_03810 PF00009 Elongation factor Tu GTP binding domain D0871_03810 PF04760 Translation initiation factor IF-2, N-terminal region D0871_03810 PF08364 Bacterial translation initiation factor IF-2 associated region D0871_03815 PF02033 Ribosome-binding factor A D0871_03820 PF09157 Pseudouridine synthase II TruB, C-terminal D0871_03820 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0871_03820 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0871_03825 PF00312 Ribosomal protein S15 D0871_03830 PF00013 KH domain D0871_03830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0871_03830 PF01138 3' exoribonuclease family, domain 1 D0871_03830 PF00575 S1 RNA binding domain D0871_03830 PF03725 3' exoribonuclease family, domain 2 D0871_03835 PF13181 Tetratricopeptide repeat D0871_03835 PF07719 Tetratricopeptide repeat D0871_03845 PF01554 MatE D0871_03860 PF00990 Diguanylate cyclase, GGDEF domain D0871_03860 PF03707 Bacterial signalling protein N terminal repeat D0871_03860 PF00563 EAL domain D0871_03870 PF13508 Acetyltransferase (GNAT) domain D0871_03890 PF00009 Elongation factor Tu GTP binding domain D0871_03890 PF03144 Elongation factor Tu domain 2 D0871_03890 PF16658 Class II release factor RF3, C-terminal domain D0871_03900 PF01026 TatD related DNase D0871_03905 PF07662 Na+ dependent nucleoside transporter C-terminus D0871_03905 PF01773 Na+ dependent nucleoside transporter N-terminus D0871_03905 PF07670 Nucleoside recognition D0871_03910 PF01791 DeoC/LacD family aldolase D0871_03915 PF02885 Glycosyl transferase family, helical bundle domain D0871_03915 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0871_03915 PF00591 Glycosyl transferase family, a/b domain D0871_03920 PF01676 Metalloenzyme superfamily D0871_03925 PF01048 Phosphorylase superfamily D0871_03935 PF18429 Domain of unknown function (DUF5609) D0871_03945 PF18073 Rubredoxin metal binding domain D0871_03950 PF03144 Elongation factor Tu domain 2 D0871_03950 PF00679 Elongation factor G C-terminus D0871_03950 PF00009 Elongation factor Tu GTP binding domain D0871_03950 PF14492 Elongation Factor G, domain II D0871_03950 PF03764 Elongation factor G, domain IV D0871_03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_03955 PF03466 LysR substrate binding domain D0871_03965 PF00501 AMP-binding enzyme D0871_03995 PF00196 Bacterial regulatory proteins, luxR family D0871_04005 PF03466 LysR substrate binding domain D0871_04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_04010 PF13520 Amino acid permease D0871_04015 PF04074 YhcH/YjgK/YiaL D0871_04020 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0871_04020 PF00703 Glycosyl hydrolases family 2 D0871_04020 PF02929 Beta galactosidase small chain D0871_04020 PF16353 Domain of unknown function(DUF4981) D0871_04020 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0871_04025 PF00356 Bacterial regulatory proteins, lacI family D0871_04035 PF16363 GDP-mannose 4,6 dehydratase D0871_04040 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0871_04040 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0871_04045 PF10509 Galactokinase galactose-binding signature D0871_04045 PF08544 GHMP kinases C terminal D0871_04045 PF00288 GHMP kinases N terminal domain D0871_04050 PF01263 Aldose 1-epimerase D0871_04055 PF00474 Sodium:solute symporter family D0871_04065 PF14579 Helix-hairpin-helix motif D0871_04065 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0871_04065 PF00929 Exonuclease D0871_04065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0871_04065 PF02811 PHP domain D0871_04070 PF00356 Bacterial regulatory proteins, lacI family D0871_04075 PF01588 Putative tRNA binding domain D0871_04090 PF01544 CorA-like Mg2+ transporter protein D0871_04095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0871_04095 PF01266 FAD dependent oxidoreductase D0871_04100 PF08220 DeoR-like helix-turn-helix domain D0871_04100 PF00455 DeoR C terminal sensor domain D0871_04105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0871_04105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0871_04110 PF00230 Major intrinsic protein D0871_04125 PF07690 Major Facilitator Superfamily D0871_04130 PF03009 Glycerophosphoryl diester phosphodiesterase family D0871_04135 PF14602 Hexapeptide repeat of succinyl-transferase D0871_04135 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D0871_04140 PF07130 YebG protein D0871_04145 PF03466 LysR substrate binding domain D0871_04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_04155 PF00884 Sulfatase D0871_04155 PF11893 Domain of unknown function (DUF3413) D0871_04160 PF17946 RecC C-terminal domain D0871_04170 PF12705 PD-(D/E)XK nuclease superfamily D0871_04170 PF13361 UvrD-like helicase C-terminal domain D0871_04170 PF00580 UvrD/REP helicase N-terminal domain D0871_04175 PF13538 UvrD-like helicase C-terminal domain D0871_04185 PF00583 Acetyltransferase (GNAT) family D0871_04185 PF00696 Amino acid kinase family D0871_04200 PF06725 3D domain D0871_04200 PF03562 MltA specific insert domain D0871_04205 PF00899 ThiF family D0871_04210 PF02657 Fe-S metabolism associated domain D0871_04215 PF00990 Diguanylate cyclase, GGDEF domain D0871_04215 PF17158 Membrane-associated sensor, integral membrane domain D0871_04220 PF00266 Aminotransferase class-V D0871_04225 PF01965 DJ-1/PfpI family D0871_04230 PF02558 Ketopantoate reductase PanE/ApbA D0871_04230 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0871_04235 PF03502 Nucleoside-specific channel-forming protein, Tsx D0871_04260 PF04545 Sigma-70, region 4 D0871_04260 PF04542 Sigma-70 region 2 D0871_04270 PF07690 Major Facilitator Superfamily D0871_04275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0871_04280 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0871_04280 PF03923 Uncharacterized lipoprotein D0871_04285 PF05175 Methyltransferase small domain D0871_04290 PF01722 BolA-like protein D0871_04300 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0871_04300 PF11973 NQRA C-terminal domain D0871_04305 PF03116 NQR2, RnfD, RnfE family D0871_04310 PF04205 FMN-binding domain D0871_04315 PF02508 Rnf-Nqr subunit, membrane protein D0871_04320 PF02508 Rnf-Nqr subunit, membrane protein D0871_04325 PF00175 Oxidoreductase NAD-binding domain D0871_04325 PF00970 Oxidoreductase FAD-binding domain D0871_04325 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_04330 PF02424 ApbE family D0871_04410 PF13411 MerR HTH family regulatory protein D0871_04415 PF02899 Phage integrase, N-terminal SAM-like domain D0871_04415 PF00589 Phage integrase family D0871_04425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_04425 PF00529 HlyD membrane-fusion protein of T1SS D0871_04500 PF00293 NUDIX domain D0871_04525 PF11799 impB/mucB/samB family C-terminal domain D0871_04525 PF00817 impB/mucB/samB family D0871_04525 PF11798 IMS family HHH motif D0871_04530 PF00817 impB/mucB/samB family D0871_04530 PF11798 IMS family HHH motif D0871_04530 PF11799 impB/mucB/samB family C-terminal domain D0871_04535 PF00570 HRDC domain D0871_04535 PF00270 DEAD/DEAH box helicase D0871_04535 PF16124 RecQ zinc-binding D0871_04535 PF00271 Helicase conserved C-terminal domain D0871_04535 PF09382 RQC domain D0871_04540 PF01272 Transcription elongation factor, GreA/GreB, C-term D0871_04540 PF03449 Transcription elongation factor, N-terminal D0871_04555 PF00209 Sodium:neurotransmitter symporter family D0871_04565 PF06786 Uncharacterised protein family (UPF0253) D0871_04575 PF04073 Aminoacyl-tRNA editing domain D0871_04575 PF03129 Anticodon binding domain D0871_04575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0871_04580 PF01980 tRNA-methyltransferase O D0871_04580 PF18389 TrmO C-terminal domain D0871_04585 PF01197 Ribosomal protein L31 D0871_04590 PF00444 Ribosomal protein L36 D0871_04595 PF03806 AbgT putative transporter family D0871_04600 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0871_04625 PF04287 tRNA pseudouridine synthase C D0871_04630 PF00849 RNA pseudouridylate synthase D0871_04635 PF11944 Protein of unknown function (DUF3461) D0871_04640 PF01909 Nucleotidyltransferase domain D0871_04640 PF08335 GlnD PII-uridylyltransferase D0871_04640 PF01966 HD domain D0871_04640 PF01842 ACT domain D0871_04645 PF00557 Metallopeptidase family M24 D0871_04650 PF00318 Ribosomal protein S2 D0871_04655 PF00889 Elongation factor TS D0871_04660 PF00696 Amino acid kinase family D0871_04665 PF01765 Ribosome recycling factor D0871_04670 PF01255 Putative undecaprenyl diphosphate synthase D0871_04680 PF13288 DXP reductoisomerase C-terminal domain D0871_04680 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0871_04680 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0871_04685 PF17820 PDZ domain D0871_04685 PF02163 Peptidase family M50 D0871_04690 PF07244 Surface antigen variable number repeat D0871_04690 PF01103 Surface antigen D0871_04695 PF03938 Outer membrane protein (OmpH-like) D0871_04700 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_04700 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D0871_04705 PF07977 FabA-like domain D0871_04710 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_04710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0871_04715 PF02684 Lipid-A-disaccharide synthetase D0871_04720 PF01351 Ribonuclease HII D0871_04725 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0871_04725 PF02811 PHP domain D0871_04725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0871_04725 PF14579 Helix-hairpin-helix motif D0871_04725 PF01336 OB-fold nucleic acid binding domain D0871_04730 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0871_04735 PF01171 PP-loop family D0871_04735 PF09179 TilS substrate binding domain D0871_04735 PF11734 TilS substrate C-terminal domain D0871_04740 PF00034 Cytochrome c D0871_04745 PF00543 Nitrogen regulatory protein P-II D0871_04750 PF03372 Endonuclease/Exonuclease/phosphatase family D0871_04760 PF01464 Transglycosylase SLT domain D0871_04760 PF01476 LysM domain D0871_04765 PF00753 Metallo-beta-lactamase superfamily D0871_04765 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0871_04770 PF08241 Methyltransferase domain D0871_04775 PF00075 RNase H D0871_04780 PF00929 Exonuclease D0871_04800 PF00583 Acetyltransferase (GNAT) family D0871_04805 PF00916 Sulfate permease family D0871_04805 PF01740 STAS domain D0871_04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_04810 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_04810 PF09317 Domain of unknown function (DUF1974) D0871_04815 PF13580 SIS domain D0871_04820 PF13230 Glutamine amidotransferases class-II D0871_04825 PF00551 Formyl transferase D0871_04830 PF02769 AIR synthase related protein, C-terminal domain D0871_04830 PF00586 AIR synthase related protein, N-terminal domain D0871_04840 PF00860 Permease family D0871_04860 PF13181 Tetratricopeptide repeat D0871_04860 PF01435 Peptidase family M48 D0871_04870 PF01594 AI-2E family transporter D0871_04875 PF00578 AhpC/TSA family D0871_04880 PF01842 ACT domain D0871_04885 PF00701 Dihydrodipicolinate synthetase family D0871_04905 PF07687 Peptidase dimerisation domain D0871_04905 PF01546 Peptidase family M20/M25/M40 D0871_04910 PF03960 ArsC family D0871_04935 PF11143 Protein of unknown function (DUF2919) D0871_04940 PF04261 Dyp-type peroxidase family D0871_04945 PF00700 Bacterial flagellin C-terminal helical region D0871_04945 PF00669 Bacterial flagellin N-terminal helical region D0871_04945 PF07196 Flagellin hook IN motif D0871_04955 PF00700 Bacterial flagellin C-terminal helical region D0871_04955 PF07196 Flagellin hook IN motif D0871_04955 PF00669 Bacterial flagellin N-terminal helical region D0871_04960 PF00669 Bacterial flagellin N-terminal helical region D0871_04960 PF00700 Bacterial flagellin C-terminal helical region D0871_04960 PF07196 Flagellin hook IN motif D0871_04965 PF03646 FlaG protein D0871_04970 PF07195 Flagellar hook-associated protein 2 C-terminus D0871_04970 PF02465 Flagellar hook-associated protein 2 N-terminus D0871_04970 PF07196 Flagellin hook IN motif D0871_04980 PF02561 Flagellar protein FliS D0871_04985 PF02954 Bacterial regulatory protein, Fis family D0871_04985 PF01590 GAF domain D0871_04985 PF00158 Sigma-54 interaction domain D0871_04990 PF00512 His Kinase A (phospho-acceptor) domain D0871_04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_04995 PF00158 Sigma-54 interaction domain D0871_04995 PF02954 Bacterial regulatory protein, Fis family D0871_04995 PF00072 Response regulator receiver domain D0871_05000 PF02049 Flagellar hook-basal body complex protein FliE D0871_05005 PF08345 Flagellar M-ring protein C-terminal D0871_05005 PF01514 Secretory protein of YscJ/FliF family D0871_05010 PF14842 FliG N-terminal domain D0871_05010 PF14841 FliG middle domain D0871_05010 PF01706 FliG C-terminal domain D0871_05020 PF18269 T3SS EscN ATPase C-terminal domain D0871_05020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_05040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0871_05040 PF02154 Flagellar motor switch protein FliM D0871_05045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0871_05050 PF04347 Flagellar biosynthesis protein, FliO D0871_05055 PF00813 FliP family D0871_05060 PF01313 Bacterial export proteins, family 3 D0871_05065 PF01311 Bacterial export proteins, family 1 D0871_05070 PF01312 FlhB HrpN YscU SpaS Family D0871_05075 PF00771 FHIPEP family D0871_05080 PF00448 SRP54-type protein, GTPase domain D0871_05085 PF10609 NUBPL iron-transfer P-loop NTPase D0871_05090 PF04545 Sigma-70, region 4 D0871_05090 PF04542 Sigma-70 region 2 D0871_05090 PF04539 Sigma-70 region 3 D0871_05095 PF00072 Response regulator receiver domain D0871_05100 PF04344 Chemotaxis phosphatase, CheZ D0871_05105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_05105 PF01627 Hpt domain D0871_05105 PF07194 P2 response regulator binding domain D0871_05105 PF02895 Signal transducing histidine kinase, homodimeric domain D0871_05105 PF01584 CheW-like domain D0871_05110 PF00072 Response regulator receiver domain D0871_05110 PF01339 CheB methylesterase D0871_05115 PF13614 AAA domain D0871_05125 PF01584 CheW-like domain D0871_05135 PF00005 ABC transporter D0871_05140 PF03379 CcmB protein D0871_05145 PF01578 Cytochrome C assembly protein D0871_05150 PF04995 Heme exporter protein D (CcmD) D0871_05155 PF03100 CcmE D0871_05160 PF01578 Cytochrome C assembly protein D0871_05160 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0871_05165 PF08534 Redoxin D0871_05170 PF03918 Cytochrome C biogenesis protein D0871_05180 PF04333 MlaA lipoprotein D0871_05185 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0871_05190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0871_05200 PF04542 Sigma-70 region 2 D0871_05200 PF08281 Sigma-70, region 4 D0871_05210 PF00108 Thiolase, N-terminal domain D0871_05210 PF02803 Thiolase, C-terminal domain D0871_05215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0871_05215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0871_05215 PF00378 Enoyl-CoA hydratase/isomerase D0871_05225 PF00675 Insulinase (Peptidase family M16) D0871_05225 PF05193 Peptidase M16 inactive domain D0871_05225 PF16187 Middle or third domain of peptidase_M16 D0871_05230 PF00300 Histidine phosphatase superfamily (branch 1) D0871_05235 PF01713 Smr domain D0871_05240 PF05175 Methyltransferase small domain D0871_05245 PF01264 Chorismate synthase D0871_05250 PF03458 UPF0126 domain D0871_05260 PF04315 Elongation factor P hydroxylase D0871_05265 PF08891 YfcL protein D0871_05275 PF03358 NADPH-dependent FMN reductase D0871_05280 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0871_05280 PF01266 FAD dependent oxidoreductase D0871_05285 PF00109 Beta-ketoacyl synthase, N-terminal domain D0871_05285 PF02801 Beta-ketoacyl synthase, C-terminal domain D0871_05295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0871_05295 PF11890 Domain of unknown function (DUF3410) D0871_05295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0871_05300 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0871_05300 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0871_05310 PF01416 tRNA pseudouridine synthase D0871_05315 PF01039 Carboxyl transferase domain D0871_05315 PF17848 Acetyl-coA carboxylase zinc finger domain D0871_05320 PF02875 Mur ligase family, glutamate ligase domain D0871_05320 PF08245 Mur ligase middle domain D0871_05325 PF05036 Sporulation related domain D0871_05330 PF02674 Colicin V production protein D0871_05335 PF00156 Phosphoribosyl transferase domain D0871_05340 PF03466 LysR substrate binding domain D0871_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_05345 PF00072 Response regulator receiver domain D0871_05355 PF04304 Protein of unknown function (DUF454) D0871_05360 PF00156 Phosphoribosyl transferase domain D0871_05365 PF12169 DNA polymerase III subunits gamma and tau domain III D0871_05365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D0871_05365 PF12170 DNA polymerase III tau subunit V interacting with alpha D0871_05370 PF02575 YbaB/EbfC DNA-binding family D0871_05375 PF02132 RecR protein D0871_05375 PF13662 Toprim domain D0871_05380 PF00230 Major intrinsic protein D0871_05390 PF01042 Endoribonuclease L-PSP D0871_05395 PF03313 Serine dehydratase alpha chain D0871_05405 PF03692 Putative zinc- or iron-chelating domain D0871_05410 PF04226 Transglycosylase associated protein D0871_05415 PF03692 Putative zinc- or iron-chelating domain D0871_05420 PF05552 Conserved TM helix D0871_05420 PF00924 Mechanosensitive ion channel D0871_05425 PF03992 Antibiotic biosynthesis monooxygenase D0871_05430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_05440 PF00245 Alkaline phosphatase D0871_05460 PF13847 Methyltransferase domain D0871_05465 PF02743 Cache domain D0871_05465 PF00672 HAMP domain D0871_05465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_05470 PF01263 Aldose 1-epimerase D0871_05475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0871_05475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0871_05480 PF01641 SelR domain D0871_05490 PF07023 Protein of unknown function (DUF1315) D0871_05495 PF17763 Glutaminase/Asparaginase C-terminal domain D0871_05495 PF00710 Asparaginase, N-terminal D0871_05500 PF01343 Peptidase family S49 D0871_05505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0871_05505 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_05510 PF00881 Nitroreductase family D0871_05515 PF01131 DNA topoisomerase D0871_05515 PF01751 Toprim domain D0871_05530 PF00106 short chain dehydrogenase D0871_05535 PF00850 Histone deacetylase domain D0871_05545 PF00884 Sulfatase D0871_05545 PF11893 Domain of unknown function (DUF3413) D0871_05550 PF07208 Protein of unknown function (DUF1414) D0871_05555 PF04245 37-kD nucleoid-associated bacterial protein D0871_05570 PF03553 Na+/H+ antiporter family D0871_05575 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0871_05575 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0871_05580 PF00520 Ion transport protein D0871_05580 PF00027 Cyclic nucleotide-binding domain D0871_05585 PF01914 MarC family integral membrane protein D0871_05590 PF00465 Iron-containing alcohol dehydrogenase D0871_05590 PF00171 Aldehyde dehydrogenase family D0871_05605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0871_05605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0871_05610 PF00462 Glutaredoxin D0871_05620 PF03553 Na+/H+ antiporter family D0871_05620 PF13726 Na+-H+ antiporter family D0871_05625 PF00929 Exonuclease D0871_05640 PF18393 MotY N-terminal domain D0871_05640 PF00691 OmpA family D0871_05645 PF10952 Protein of unknown function (DUF2753) D0871_05650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_05655 PF00633 Helix-hairpin-helix motif D0871_05655 PF10576 Iron-sulfur binding domain of endonuclease III D0871_05655 PF00730 HhH-GPD superfamily base excision DNA repair protein D0871_05660 PF02508 Rnf-Nqr subunit, membrane protein D0871_05665 PF04205 FMN-binding domain D0871_05670 PF03116 NQR2, RnfD, RnfE family D0871_05675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0871_05675 PF12838 4Fe-4S dicluster domain D0871_05675 PF13375 RnfC Barrel sandwich hybrid domain D0871_05675 PF10531 SLBB domain D0871_05680 PF04060 Putative Fe-S cluster D0871_05685 PF02508 Rnf-Nqr subunit, membrane protein D0871_05700 PF04851 Type III restriction enzyme, res subunit D0871_05700 PF12344 Ultra-violet resistance protein B D0871_05700 PF00271 Helicase conserved C-terminal domain D0871_05700 PF02151 UvrB/uvrC motif D0871_05700 PF17757 UvrB interaction domain D0871_05705 PF00158 Sigma-54 interaction domain D0871_05705 PF00072 Response regulator receiver domain D0871_05705 PF02954 Bacterial regulatory protein, Fis family D0871_05710 PF01627 Hpt domain D0871_05715 PF01933 Uncharacterised protein family UPF0052 D0871_05720 PF06463 Molybdenum Cofactor Synthesis C D0871_05720 PF04055 Radical SAM superfamily D0871_05725 PF00994 Probable molybdopterin binding domain D0871_05730 PF01967 MoaC family D0871_05735 PF02597 ThiS family D0871_05740 PF02391 MoaE protein D0871_05745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_05750 PF00528 Binding-protein-dependent transport system inner membrane component D0871_05755 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_05755 PF00528 Binding-protein-dependent transport system inner membrane component D0871_05760 PF00005 ABC transporter D0871_05760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_05765 PF00005 ABC transporter D0871_05770 PF13409 Glutathione S-transferase, N-terminal domain D0871_05780 PF13194 Domain of unknown function (DUF4010) D0871_05785 PF01515 Phosphate acetyl/butaryl transferase D0871_05785 PF07085 DRTGG domain D0871_05790 PF00871 Acetokinase family D0871_05795 PF04217 Protein of unknown function, DUF412 D0871_05805 PF02653 Branched-chain amino acid transport system / permease component D0871_05810 PF00005 ABC transporter D0871_05815 PF02903 Alpha amylase, N-terminal ig-like domain D0871_05815 PF00128 Alpha amylase, catalytic domain D0871_05820 PF00990 Diguanylate cyclase, GGDEF domain D0871_05820 PF00072 Response regulator receiver domain D0871_05825 PF01207 Dihydrouridine synthase (Dus) D0871_05830 PF03695 Uncharacterised protein family (UPF0149) D0871_05830 PF02810 SEC-C motif D0871_05835 PF02600 Disulfide bond formation protein DsbB D0871_05840 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0871_05845 PF07840 FadR C-terminal domain D0871_05845 PF00392 Bacterial regulatory proteins, gntR family D0871_05855 PF01588 Putative tRNA binding domain D0871_05855 PF09334 tRNA synthetases class I (M) D0871_05860 PF10609 NUBPL iron-transfer P-loop NTPase D0871_05865 PF00485 Phosphoribulokinase / Uridine kinase family D0871_05875 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0871_05875 PF12557 Cob(I)alamin adenosyltransferase N terminal D0871_05880 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0871_05885 PF01740 STAS domain D0871_05885 PF00916 Sulfate permease family D0871_05895 PF00575 S1 RNA binding domain D0871_05895 PF12111 Polyribonucleotide phosphorylase C terminal D0871_05895 PF10150 Ribonuclease E/G family D0871_05910 PF00849 RNA pseudouridylate synthase D0871_05910 PF01479 S4 domain D0871_05915 PF02545 Maf-like protein D0871_05920 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0871_05925 PF01783 Ribosomal L32p protein family D0871_05930 PF02504 Fatty acid synthesis protein D0871_05935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0871_05935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0871_05940 PF00698 Acyl transferase domain D0871_05950 PF00550 Phosphopantetheine attachment site D0871_05955 PF00109 Beta-ketoacyl synthase, N-terminal domain D0871_05955 PF02801 Beta-ketoacyl synthase, C-terminal domain D0871_05960 PF01063 Amino-transferase class IV D0871_05965 PF02618 YceG-like family D0871_05970 PF02223 Thymidylate kinase D0871_05975 PF09115 DNA polymerase III, delta subunit, C terminal D0871_05980 PF01026 TatD related DNase D0871_05985 PF02378 Phosphotransferase system, EIIC D0871_05985 PF00367 phosphotransferase system, EIIB D0871_06005 PF00209 Sodium:neurotransmitter symporter family D0871_06020 PF01734 Patatin-like phospholipase D0871_06025 PF00224 Pyruvate kinase, barrel domain D0871_06025 PF02887 Pyruvate kinase, alpha/beta domain D0871_06030 PF00480 ROK family D0871_06035 PF01584 CheW-like domain D0871_06035 PF00072 Response regulator receiver domain D0871_06040 PF14579 Helix-hairpin-helix motif D0871_06040 PF02811 PHP domain D0871_06040 PF01336 OB-fold nucleic acid binding domain D0871_06040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0871_06040 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0871_06055 PF00106 short chain dehydrogenase D0871_06060 PF01343 Peptidase family S49 D0871_06060 PF08496 Peptidase family S49 N-terminal D0871_06065 PF02224 Cytidylate kinase D0871_06070 PF00575 S1 RNA binding domain D0871_06075 PF00216 Bacterial DNA-binding protein D0871_06080 PF06305 Lipopolysaccharide assembly protein A domain D0871_06085 PF18073 Rubredoxin metal binding domain D0871_06090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0871_06095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_06105 PF01370 NAD dependent epimerase/dehydratase family D0871_06110 PF00535 Glycosyl transferase family 2 D0871_06120 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D0871_06130 PF02470 MlaD protein D0871_06135 PF04403 Paraquat-inducible protein A D0871_06140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0871_06145 PF00034 Cytochrome c D0871_06150 PF00384 Molybdopterin oxidoreductase D0871_06150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_06150 PF01568 Molydopterin dinucleotide binding domain D0871_06155 PF03916 Polysulphide reductase, NrfD D0871_06160 PF13247 4Fe-4S dicluster domain D0871_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_06165 PF00512 His Kinase A (phospho-acceptor) domain D0871_06170 PF00072 Response regulator receiver domain D0871_06170 PF00196 Bacterial regulatory proteins, luxR family D0871_06175 PF03466 LysR substrate binding domain D0871_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_06185 PF02683 Cytochrome C biogenesis protein transmembrane region D0871_06185 PF11412 Disulphide bond corrector protein DsbC D0871_06190 PF00085 Thioredoxin D0871_06200 PF01938 TRAM domain D0871_06200 PF05958 tRNA (Uracil-5-)-methyltransferase D0871_06215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_06225 PF12704 MacB-like periplasmic core domain D0871_06225 PF00005 ABC transporter D0871_06225 PF02687 FtsX-like permease family D0871_06230 PF02687 FtsX-like permease family D0871_06230 PF12704 MacB-like periplasmic core domain D0871_06230 PF00005 ABC transporter D0871_06235 PF12704 MacB-like periplasmic core domain D0871_06235 PF02687 FtsX-like permease family D0871_06235 PF00005 ABC transporter D0871_06240 PF00857 Isochorismatase family D0871_06245 PF02311 AraC-like ligand binding domain D0871_06245 PF12833 Helix-turn-helix domain D0871_06255 PF01717 Cobalamin-independent synthase, Catalytic domain D0871_06255 PF08267 Cobalamin-independent synthase, N-terminal domain D0871_06265 PF00529 HlyD membrane-fusion protein of T1SS D0871_06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_06270 PF03466 LysR substrate binding domain D0871_06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_06290 PF00512 His Kinase A (phospho-acceptor) domain D0871_06290 PF00672 HAMP domain D0871_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_06295 PF00486 Transcriptional regulatory protein, C terminal D0871_06295 PF00072 Response regulator receiver domain D0871_06305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_06305 PF00672 HAMP domain D0871_06310 PF04055 Radical SAM superfamily D0871_06310 PF08497 Radical SAM N-terminal D0871_06310 PF11842 Domain of unknown function (DUF3362) D0871_06315 PF00990 Diguanylate cyclase, GGDEF domain D0871_06315 PF00360 Phytochrome region D0871_06315 PF00563 EAL domain D0871_06315 PF01590 GAF domain D0871_06330 PF03466 LysR substrate binding domain D0871_06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_06340 PF01717 Cobalamin-independent synthase, Catalytic domain D0871_06340 PF08267 Cobalamin-independent synthase, N-terminal domain D0871_06350 PF03795 YCII-related domain D0871_06355 PF03061 Thioesterase superfamily D0871_06360 PF04279 Intracellular septation protein A D0871_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_06370 PF00072 Response regulator receiver domain D0871_06375 PF17327 Acyl homoserine lactone synthase D0871_06380 PF00375 Sodium:dicarboxylate symporter family D0871_06390 PF13193 AMP-binding enzyme C-terminal domain D0871_06390 PF00501 AMP-binding enzyme D0871_06395 PF13545 Crp-like helix-turn-helix domain D0871_06395 PF00027 Cyclic nucleotide-binding domain D0871_06405 PF00290 Tryptophan synthase alpha chain D0871_06410 PF00291 Pyridoxal-phosphate dependent enzyme D0871_06415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0871_06415 PF00218 Indole-3-glycerol phosphate synthase D0871_06420 PF02885 Glycosyl transferase family, helical bundle domain D0871_06420 PF00591 Glycosyl transferase family, a/b domain D0871_06425 PF00117 Glutamine amidotransferase class-I D0871_06430 PF04715 Anthranilate synthase component I, N terminal region D0871_06430 PF00425 chorismate binding enzyme D0871_06435 PF08056 Tryptophan operon leader peptide D0871_06440 PF02811 PHP domain D0871_06445 PF01300 Telomere recombination D0871_06455 PF01479 S4 domain D0871_06455 PF00849 RNA pseudouridylate synthase D0871_06465 PF04269 Protein of unknown function, DUF440 D0871_06470 PF01132 Elongation factor P (EF-P) OB domain D0871_06470 PF08207 Elongation factor P (EF-P) KOW-like domain D0871_06470 PF09285 Elongation factor P, C-terminal D0871_06480 PF03104 DNA polymerase family B, exonuclease domain D0871_06480 PF00136 DNA polymerase family B D0871_06485 PF00196 Bacterial regulatory proteins, luxR family D0871_06485 PF00072 Response regulator receiver domain D0871_06490 PF01541 GIY-YIG catalytic domain D0871_06490 PF02151 UvrB/uvrC motif D0871_06490 PF08459 UvrC Helix-hairpin-helix N-terminal D0871_06495 PF01066 CDP-alcohol phosphatidyltransferase D0871_06520 PF00202 Aminotransferase class-III D0871_06525 PF16653 Saccharopine dehydrogenase C-terminal domain D0871_06525 PF03435 Saccharopine dehydrogenase NADP binding domain D0871_06530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0871_06545 PF00994 Probable molybdopterin binding domain D0871_06555 PF00268 Ribonucleotide reductase, small chain D0871_06560 PF00317 Ribonucleotide reductase, all-alpha domain D0871_06560 PF02867 Ribonucleotide reductase, barrel domain D0871_06560 PF03477 ATP cone domain D0871_06570 PF03989 DNA gyrase C-terminal domain, beta-propeller D0871_06570 PF00521 DNA gyrase/topoisomerase IV, subunit A D0871_06585 PF02335 Cytochrome c552 D0871_06595 PF13247 4Fe-4S dicluster domain D0871_06600 PF03916 Polysulphide reductase, NrfD D0871_06605 PF01578 Cytochrome C assembly protein D0871_06605 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0871_06610 PF08534 Redoxin D0871_06615 PF03918 Cytochrome C biogenesis protein D0871_06625 PF00925 GTP cyclohydrolase II D0871_06650 PF01471 Putative peptidoglycan binding domain D0871_06650 PF03734 L,D-transpeptidase catalytic domain D0871_06655 PF05951 Bacterial protein of unknown function (DUF882) D0871_06660 PF00753 Metallo-beta-lactamase superfamily D0871_06675 PF03480 Bacterial extracellular solute-binding protein, family 7 D0871_06685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0871_06690 PF17200 Single Cache domain 2 D0871_06690 PF07730 Histidine kinase D0871_06695 PF00072 Response regulator receiver domain D0871_06695 PF00196 Bacterial regulatory proteins, luxR family D0871_06700 PF01047 MarR family D0871_06705 PF02028 BCCT, betaine/carnitine/choline family transporter D0871_06710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_06710 PF00672 HAMP domain D0871_06730 PF00155 Aminotransferase class I and II D0871_06755 PF00155 Aminotransferase class I and II D0871_06755 PF00392 Bacterial regulatory proteins, gntR family D0871_06765 PF01336 OB-fold nucleic acid binding domain D0871_06765 PF00152 tRNA synthetases class II (D, K and N) D0871_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_06770 PF00672 HAMP domain D0871_06770 PF12729 Four helix bundle sensory module for signal transduction D0871_06775 PF01242 6-pyruvoyl tetrahydropterin synthase D0871_06785 PF04940 Sensors of blue-light using FAD D0871_06785 PF00563 EAL domain D0871_06790 PF03315 Serine dehydratase beta chain D0871_06790 PF03313 Serine dehydratase alpha chain D0871_06795 PF03222 Tryptophan/tyrosine permease family D0871_06800 PF00293 NUDIX domain D0871_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_06810 PF00072 Response regulator receiver domain D0871_06810 PF00512 His Kinase A (phospho-acceptor) domain D0871_06810 PF09308 LuxQ, periplasmic D0871_06815 PF00425 chorismate binding enzyme D0871_06815 PF04715 Anthranilate synthase component I, N terminal region D0871_06835 PF04317 YcjX-like family, DUF463 D0871_06840 PF05128 Domain of unknown function (DUF697) D0871_06845 PF18024 Helix-turn-helix domain D0871_06845 PF00158 Sigma-54 interaction domain D0871_06850 PF13302 Acetyltransferase (GNAT) domain D0871_06865 PF00589 Phage integrase family D0871_06865 PF13495 Phage integrase, N-terminal SAM-like domain D0871_06975 PF00857 Isochorismatase family D0871_07245 PF02567 Phenazine biosynthesis-like protein D0871_07280 PF02254 TrkA-N domain D0871_07280 PF07885 Ion channel D0871_07295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_07475 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0871_07765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_07890 PF13099 Domain of unknown function (DUF3944) D0871_07890 PF03981 Ubiquinol-cytochrome C chaperone D0871_07950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0871_08000 PF03553 Na+/H+ antiporter family D0871_08005 PF00120 Glutamine synthetase, catalytic domain D0871_08015 PF07722 Peptidase C26 D0871_08020 PF01381 Helix-turn-helix D0871_08020 PF07883 Cupin domain D0871_08025 PF00171 Aldehyde dehydrogenase family D0871_08030 PF01266 FAD dependent oxidoreductase D0871_08035 PF00795 Carbon-nitrogen hydrolase D0871_08040 PF04371 Porphyromonas-type peptidyl-arginine deiminase D0871_08045 PF00171 Aldehyde dehydrogenase family D0871_08050 PF00202 Aminotransferase class-III D0871_08055 PF02833 DHHA2 domain D0871_08055 PF01368 DHH family D0871_08065 PF00196 Bacterial regulatory proteins, luxR family D0871_08065 PF00563 EAL domain D0871_08080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0871_08080 PF01411 tRNA synthetases class II (A) D0871_08080 PF02272 DHHA1 domain D0871_08085 PF12833 Helix-turn-helix domain D0871_08095 PF01047 MarR family D0871_08100 PF04237 YjbR D0871_08110 PF01928 CYTH domain D0871_08120 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_08120 PF12464 Maltose acetyltransferase D0871_08135 PF00072 Response regulator receiver domain D0871_08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_08135 PF00512 His Kinase A (phospho-acceptor) domain D0871_08135 PF00672 HAMP domain D0871_08135 PF01627 Hpt domain D0871_08135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0871_08140 PF00990 Diguanylate cyclase, GGDEF domain D0871_08140 PF03707 Bacterial signalling protein N terminal repeat D0871_08140 PF00563 EAL domain D0871_08155 PF04204 Homoserine O-succinyltransferase D0871_08170 PF13520 Amino acid permease D0871_08180 PF03279 Bacterial lipid A biosynthesis acyltransferase D0871_08195 PF13408 Recombinase zinc beta ribbon domain D0871_08195 PF00239 Resolvase, N terminal domain D0871_08195 PF07508 Recombinase D0871_08285 PF13195 Protein of unknown function (DUF4011) D0871_08285 PF13086 AAA domain D0871_08285 PF13087 AAA domain D0871_08285 PF13087 AAA domain D0871_08285 PF13195 Protein of unknown function (DUF4011) D0871_08285 PF13086 AAA domain D0871_08300 PF00072 Response regulator receiver domain D0871_08300 PF00158 Sigma-54 interaction domain D0871_08335 PF13438 Domain of unknown function (DUF4113) D0871_08335 PF00817 impB/mucB/samB family D0871_08335 PF11799 impB/mucB/samB family C-terminal domain D0871_08340 PF00717 Peptidase S24-like D0871_08380 PF00990 Diguanylate cyclase, GGDEF domain D0871_08380 PF17152 Periplasmic sensor domain D0871_08425 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0871_08430 PF01810 LysE type translocator D0871_08440 PF01235 Sodium:alanine symporter family D0871_08465 PF00884 Sulfatase D0871_08470 PF00512 His Kinase A (phospho-acceptor) domain D0871_08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_08470 PF08521 Two-component sensor kinase N-terminal D0871_08475 PF00072 Response regulator receiver domain D0871_08475 PF00486 Transcriptional regulatory protein, C terminal D0871_08495 PF00501 AMP-binding enzyme D0871_08510 PF00528 Binding-protein-dependent transport system inner membrane component D0871_08515 PF00571 CBS domain D0871_08515 PF00005 ABC transporter D0871_08530 PF02028 BCCT, betaine/carnitine/choline family transporter D0871_08535 PF00583 Acetyltransferase (GNAT) family D0871_08540 PF00202 Aminotransferase class-III D0871_08545 PF06339 Ectoine synthase D0871_08550 PF00696 Amino acid kinase family D0871_08550 PF13840 ACT domain D0871_08555 PF00034 Cytochrome c D0871_08555 PF03150 Di-haem cytochrome c peroxidase D0871_08570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_08585 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0871_08585 PF17203 Single cache domain 3 D0871_08585 PF00989 PAS fold D0871_08590 PF00072 Response regulator receiver domain D0871_08590 PF12431 Transcriptional regulator D0871_08605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0871_08605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0871_08610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0871_08615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0871_08615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0871_08640 PF02954 Bacterial regulatory protein, Fis family D0871_08640 PF00158 Sigma-54 interaction domain D0871_08640 PF01590 GAF domain D0871_08645 PF00171 Aldehyde dehydrogenase family D0871_08665 PF12833 Helix-turn-helix domain D0871_08685 PF16693 Inner membrane component of T3SS, periplasmic domain D0871_08685 PF16697 Inner membrane component of T3SS, cytoplasmic domain D0871_08695 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D0871_08700 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) D0871_08710 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI D0871_08715 PF01514 Secretory protein of YscJ/FliF family D0871_08725 PF02108 Flagellar assembly protein FliH D0871_08735 PF02661 Fic/DOC family D0871_08775 PF12146 Serine aminopeptidase, S33 D0871_08780 PF12146 Serine aminopeptidase, S33 D0871_08785 PF03466 LysR substrate binding domain D0871_08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_08790 PF01312 FlhB HrpN YscU SpaS Family D0871_08795 PF01311 Bacterial export proteins, family 1 D0871_08800 PF01313 Bacterial export proteins, family 3 D0871_08805 PF00813 FliP family D0871_08810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0871_08825 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0871_08825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_08825 PF18269 T3SS EscN ATPase C-terminal domain D0871_08830 PF07201 HrpJ-like domain D0871_08835 PF09059 TyeA D0871_08855 PF00771 FHIPEP family D0871_08860 PF09621 Type III secretion system regulator (LcrR) D0871_08865 PF07216 LcrG protein D0871_08870 PF04792 V antigen (LcrV) protein D0871_08875 PF07720 Tetratricopeptide repeat D0871_08885 PF05844 YopD protein D0871_08900 PF01970 Tripartite tricarboxylate transporter TctA family D0871_08930 PF00285 Citrate synthase, C-terminal domain D0871_08940 PF00694 Aconitase C-terminal domain D0871_08940 PF00330 Aconitase family (aconitate hydratase) D0871_08945 PF04303 PrpF protein D0871_08950 PF13193 AMP-binding enzyme C-terminal domain D0871_08950 PF16177 Acetyl-coenzyme A synthetase N-terminus D0871_08950 PF00501 AMP-binding enzyme D0871_08960 PF00089 Trypsin D0871_08975 PF04055 Radical SAM superfamily D0871_08980 PF06508 Queuosine biosynthesis protein QueC D0871_08985 PF00990 Diguanylate cyclase, GGDEF domain D0871_08985 PF17158 Membrane-associated sensor, integral membrane domain D0871_08995 PF00691 OmpA family D0871_08995 PF05736 OprF membrane domain D0871_09010 PF05736 OprF membrane domain D0871_09010 PF00691 OmpA family D0871_09030 PF10672 S-adenosylmethionine-dependent methyltransferase D0871_09030 PF17785 PUA-like domain D0871_09035 PF00672 HAMP domain D0871_09035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_09035 PF02743 Cache domain D0871_09040 PF00708 Acylphosphatase D0871_09045 PF04358 DsrC like protein D0871_09055 PF01027 Inhibitor of apoptosis-promoting Bax1 D0871_09060 PF00005 ABC transporter D0871_09065 PF00528 Binding-protein-dependent transport system inner membrane component D0871_09070 PF00528 Binding-protein-dependent transport system inner membrane component D0871_09075 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_09085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0871_09085 PF14824 Sirohaem biosynthesis protein central D0871_09085 PF10414 Sirohaem synthase dimerisation region D0871_09095 PF04461 Protein of unknown function (DUF520) D0871_09100 PF00793 DAHP synthetase I family D0871_09120 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D0871_09120 PF01189 16S rRNA methyltransferase RsmB/F D0871_09120 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D0871_09130 PF02470 MlaD protein D0871_09135 PF04403 Paraquat-inducible protein A D0871_09140 PF00005 ABC transporter D0871_09140 PF00664 ABC transporter transmembrane region D0871_09145 PF13185 GAF domain D0871_09150 PF17516 ProQ C-terminal domain D0871_09150 PF04352 ProQ/FINO family D0871_09155 PF00595 PDZ domain D0871_09155 PF17804 Tail specific protease N-terminal domain D0871_09155 PF11818 C-terminal domain of tail specific protease (DUF3340) D0871_09155 PF03572 Peptidase family S41 D0871_09165 PF11940 Domain of unknown function (DUF3458) Ig-like fold D0871_09165 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D0871_09165 PF01433 Peptidase family M1 domain D0871_09175 PF05088 Bacterial NAD-glutamate dehydrogenase D0871_09180 PF01180 Dihydroorotate dehydrogenase D0871_09185 PF07126 Cell-division protein ZapC D0871_09195 PF01170 Putative RNA methylase family UPF0020 D0871_09195 PF10672 S-adenosylmethionine-dependent methyltransferase D0871_09195 PF02926 THUMP domain D0871_09215 PF04957 Ribosome modulation factor D0871_09220 PF07977 FabA-like domain D0871_09225 PF05362 Lon protease (S16) C-terminal proteolytic domain D0871_09225 PF13654 AAA domain D0871_09230 PF06303 MatP N-terminal domain D0871_09230 PF17414 MatP C-terminal ribbon-helix-helix domain D0871_09320 PF05707 Zonular occludens toxin (Zot) D0871_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_09370 PF00072 Response regulator receiver domain D0871_09370 PF00512 His Kinase A (phospho-acceptor) domain D0871_09370 PF09308 LuxQ, periplasmic D0871_09385 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0871_09400 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D0871_09400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0871_09410 PF00403 Heavy-metal-associated domain D0871_09425 PF00027 Cyclic nucleotide-binding domain D0871_09425 PF13545 Crp-like helix-turn-helix domain D0871_09430 PF00582 Universal stress protein family D0871_09440 PF01171 PP-loop family D0871_09460 PF08402 TOBE domain D0871_09460 PF00005 ABC transporter D0871_09465 PF00528 Binding-protein-dependent transport system inner membrane component D0871_09470 PF00528 Binding-protein-dependent transport system inner membrane component D0871_09475 PF13416 Bacterial extracellular solute-binding protein D0871_09480 PF13416 Bacterial extracellular solute-binding protein D0871_09485 PF02146 Sir2 family D0871_09495 PF00909 Ammonium Transporter Family D0871_09520 PF13247 4Fe-4S dicluster domain D0871_09525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_09525 PF01568 Molydopterin dinucleotide binding domain D0871_09525 PF00384 Molybdopterin oxidoreductase D0871_09535 PF02613 Nitrate reductase delta subunit D0871_09560 PF02634 FdhD/NarQ family D0871_09565 PF00005 ABC transporter D0871_09565 PF12848 ABC transporter D0871_09575 PF00512 His Kinase A (phospho-acceptor) domain D0871_09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_09580 PF00072 Response regulator receiver domain D0871_09580 PF02954 Bacterial regulatory protein, Fis family D0871_09580 PF00158 Sigma-54 interaction domain D0871_09590 PF12849 PBP superfamily domain D0871_09595 PF00528 Binding-protein-dependent transport system inner membrane component D0871_09600 PF00005 ABC transporter D0871_09600 PF08402 TOBE domain D0871_09605 PF12804 MobA-like NTP transferase domain D0871_09610 PF00994 Probable molybdopterin binding domain D0871_09610 PF03454 MoeA C-terminal region (domain IV) D0871_09610 PF03453 MoeA N-terminal region (domain I and II) D0871_09620 PF00480 ROK family D0871_09660 PF17202 Single cache domain 3 D0871_09660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_09660 PF00672 HAMP domain D0871_09665 PF00877 NlpC/P60 family D0871_09675 PF05230 MASE2 domain D0871_09675 PF00990 Diguanylate cyclase, GGDEF domain D0871_09680 PF01339 CheB methylesterase D0871_09680 PF00072 Response regulator receiver domain D0871_09695 PF00677 Lumazine binding domain D0871_09700 PF01554 MatE D0871_09710 PF01068 ATP dependent DNA ligase domain D0871_09710 PF14743 DNA ligase OB-like domain D0871_09715 PF01740 STAS domain D0871_09725 PF10531 SLBB domain D0871_09725 PF02563 Polysaccharide biosynthesis/export protein D0871_09745 PF00158 Sigma-54 interaction domain D0871_09745 PF02954 Bacterial regulatory protein, Fis family D0871_09745 PF00072 Response regulator receiver domain D0871_09750 PF13439 Glycosyltransferase Family 4 D0871_09750 PF00534 Glycosyl transferases group 1 D0871_09755 PF13439 Glycosyltransferase Family 4 D0871_09755 PF00534 Glycosyl transferases group 1 D0871_09790 PF00534 Glycosyl transferases group 1 D0871_09790 PF13439 Glycosyltransferase Family 4 D0871_09795 PF00535 Glycosyl transferase family 2 D0871_09800 PF02397 Bacterial sugar transferase D0871_09810 PF02028 BCCT, betaine/carnitine/choline family transporter D0871_09825 PF04408 Helicase associated domain (HA2) D0871_09825 PF00271 Helicase conserved C-terminal domain D0871_09825 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0871_09825 PF11898 Domain of unknown function (DUF3418) D0871_09825 PF00270 DEAD/DEAH box helicase D0871_09830 PF02525 Flavodoxin-like fold D0871_09835 PF00037 4Fe-4S binding domain D0871_09835 PF12838 4Fe-4S dicluster domain D0871_09840 PF02613 Nitrate reductase delta subunit D0871_09845 PF04976 DMSO reductase anchor subunit (DmsC) D0871_09850 PF13247 4Fe-4S dicluster domain D0871_09850 PF12800 4Fe-4S binding domain D0871_09855 PF00384 Molybdopterin oxidoreductase D0871_09855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_09855 PF01568 Molydopterin dinucleotide binding domain D0871_09885 PF00990 Diguanylate cyclase, GGDEF domain D0871_09885 PF17158 Membrane-associated sensor, integral membrane domain D0871_09895 PF00012 Hsp70 protein D0871_09900 PF00012 Hsp70 protein D0871_09930 PF00664 ABC transporter transmembrane region D0871_09930 PF00005 ABC transporter D0871_09935 PF00664 ABC transporter transmembrane region D0871_09935 PF00005 ABC transporter D0871_09960 PF03222 Tryptophan/tyrosine permease family D0871_09965 PF00465 Iron-containing alcohol dehydrogenase D0871_09975 PF01966 HD domain D0871_10045 PF01037 Lrp/AsnC ligand binding domain D0871_10080 PF00069 Protein kinase domain D0871_10105 PF04717 Type VI secretion system, phage-baseplate injector D0871_10110 PF05638 Type VI secretion system effector, Hcp D0871_10115 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_10115 PF17871 AAA lid domain D0871_10115 PF00004 ATPase family associated with various cellular activities (AAA) D0871_10115 PF07724 AAA domain (Cdc48 subfamily) D0871_10120 PF00158 Sigma-54 interaction domain D0871_10120 PF02954 Bacterial regulatory protein, Fis family D0871_10145 PF08525 Opacity-associated protein A N-terminal motif D0871_10145 PF01551 Peptidase family M23 D0871_10145 PF01476 LysM domain D0871_10155 PF03741 Integral membrane protein TerC family D0871_10165 PF04055 Radical SAM superfamily D0871_10170 PF11230 Protein of unknown function (DUF3029) D0871_10175 PF01810 LysE type translocator D0871_10180 PF11871 Domain of unknown function (DUF3391) D0871_10180 PF01966 HD domain D0871_10185 PF03707 Bacterial signalling protein N terminal repeat D0871_10185 PF00990 Diguanylate cyclase, GGDEF domain D0871_10185 PF00563 EAL domain D0871_10190 PF02954 Bacterial regulatory protein, Fis family D0871_10190 PF00072 Response regulator receiver domain D0871_10190 PF00158 Sigma-54 interaction domain D0871_10195 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_10195 PF00512 His Kinase A (phospho-acceptor) domain D0871_10200 PF00939 Sodium:sulfate symporter transmembrane region D0871_10235 PF03466 LysR substrate binding domain D0871_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_10240 PF08543 Phosphomethylpyrimidine kinase D0871_10255 PF13533 Biotin-lipoyl like D0871_10300 PF14497 Glutathione S-transferase, C-terminal domain D0871_10300 PF02798 Glutathione S-transferase, N-terminal domain D0871_10310 PF04209 homogentisate 1,2-dioxygenase D0871_10315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_10325 PF01546 Peptidase family M20/M25/M40 D0871_10325 PF07687 Peptidase dimerisation domain D0871_10330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_10335 PF00528 Binding-protein-dependent transport system inner membrane component D0871_10340 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_10340 PF00528 Binding-protein-dependent transport system inner membrane component D0871_10345 PF00005 ABC transporter D0871_10345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_10350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_10350 PF00005 ABC transporter D0871_10365 PF01752 Collagenase D0871_10365 PF08453 Peptidase family M9 N-terminal D0871_10380 PF00528 Binding-protein-dependent transport system inner membrane component D0871_10385 PF00528 Binding-protein-dependent transport system inner membrane component D0871_10390 PF08402 TOBE domain D0871_10390 PF00005 ABC transporter D0871_10395 PF00701 Dihydrodipicolinate synthetase family D0871_10400 PF02423 Ornithine cyclodeaminase/mu-crystallin family D0871_10420 PF05544 Proline racemase D0871_10425 PF00171 Aldehyde dehydrogenase family D0871_10430 PF00392 Bacterial regulatory proteins, gntR family D0871_10450 PF05971 RNA methyltransferase D0871_10455 PF01863 Protein of unknown function DUF45 D0871_10460 PF04991 LicD family D0871_10465 PF16363 GDP-mannose 4,6 dehydratase D0871_10470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0871_10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_10490 PF03466 LysR substrate binding domain D0871_10510 PF00005 ABC transporter D0871_10515 PF01032 FecCD transport family D0871_10520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0871_10540 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0871_10545 PF02654 Cobalamin-5-phosphate synthase D0871_10550 PF02277 Phosphoribosyltransferase D0871_10555 PF13460 NAD(P)H-binding D0871_10565 PF08411 Exonuclease C-terminal D0871_10565 PF00929 Exonuclease D0871_10570 PF03788 LrgA family D0871_10575 PF04172 LrgB-like family D0871_10580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0871_10580 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D0871_10585 PF02222 ATP-grasp domain D0871_10590 PF05724 Thiopurine S-methyltransferase (TPMT) D0871_10600 PF00216 Bacterial DNA-binding protein D0871_10615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0871_10615 PF01588 Putative tRNA binding domain D0871_10615 PF03483 B3/4 domain D0871_10615 PF03147 Ferredoxin-fold anticodon binding domain D0871_10615 PF03484 tRNA synthetase B5 domain D0871_10620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0871_10620 PF01409 tRNA synthetases class II core domain (F) D0871_10625 PF17158 Membrane-associated sensor, integral membrane domain D0871_10625 PF00990 Diguanylate cyclase, GGDEF domain D0871_10655 PF01906 Putative heavy-metal-binding D0871_10660 PF00453 Ribosomal protein L20 D0871_10665 PF01632 Ribosomal protein L35 D0871_10670 PF00707 Translation initiation factor IF-3, C-terminal domain D0871_10670 PF05198 Translation initiation factor IF-3, N-terminal domain D0871_10675 PF03129 Anticodon binding domain D0871_10675 PF02824 TGS domain D0871_10675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0871_10675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0871_10690 PF07702 UTRA domain D0871_10690 PF00392 Bacterial regulatory proteins, gntR family D0871_10695 PF01979 Amidohydrolase family D0871_10700 PF00491 Arginase family D0871_10705 PF17392 Urocanase C-terminal domain D0871_10705 PF17391 Urocanase N-terminal domain D0871_10705 PF01175 Urocanase Rossmann-like domain D0871_10710 PF00221 Aromatic amino acid lyase D0871_10725 PF13183 4Fe-4S dicluster domain D0871_10725 PF02913 FAD linked oxidases, C-terminal domain D0871_10725 PF01565 FAD binding domain D0871_10740 PF00691 OmpA family D0871_10740 PF05736 OprF membrane domain D0871_10760 PF01259 SAICAR synthetase D0871_10765 PF09423 PhoD-like phosphatase D0871_10765 PF16655 PhoD-like phosphatase, N-terminal domain D0871_10775 PF02253 Phospholipase A1 D0871_10780 PF00270 DEAD/DEAH box helicase D0871_10780 PF04408 Helicase associated domain (HA2) D0871_10780 PF00271 Helicase conserved C-terminal domain D0871_10780 PF08482 ATP-dependent helicase C-terminal D0871_10785 PF00390 Malic enzyme, N-terminal domain D0871_10785 PF03949 Malic enzyme, NAD binding domain D0871_10790 PF02698 DUF218 domain D0871_10795 PF00939 Sodium:sulfate symporter transmembrane region D0871_10800 PF00072 Response regulator receiver domain D0871_10800 PF00990 Diguanylate cyclase, GGDEF domain D0871_10810 PF00266 Aminotransferase class-V D0871_10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_10825 PF00005 ABC transporter D0871_10825 PF00664 ABC transporter transmembrane region D0871_10830 PF00664 ABC transporter transmembrane region D0871_10830 PF00005 ABC transporter D0871_10835 PF00291 Pyridoxal-phosphate dependent enzyme D0871_10840 PF00266 Aminotransferase class-V D0871_10850 PF00512 His Kinase A (phospho-acceptor) domain D0871_10850 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_10865 PF04993 TfoX N-terminal domain D0871_10865 PF04994 TfoX C-terminal domain D0871_10885 PF03956 Lysine exporter LysO D0871_10895 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0871_10900 PF01380 SIS domain D0871_10900 PF01418 Helix-turn-helix domain, rpiR family D0871_10905 PF00465 Iron-containing alcohol dehydrogenase D0871_10915 PF00462 Glutaredoxin D0871_10920 PF02080 TrkA-C domain D0871_10920 PF06826 Predicted Permease Membrane Region D0871_10925 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0871_10925 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0871_10925 PF07055 Enoyl reductase FAD binding domain D0871_10930 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_10930 PF09317 Domain of unknown function (DUF1974) D0871_10930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_10930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_10935 PF00440 Bacterial regulatory proteins, tetR family D0871_10935 PF16295 Tetracyclin repressor-like, C-terminal domain D0871_10940 PF06965 Na+/H+ antiporter 1 D0871_10955 PF00005 ABC transporter D0871_10960 PF01554 MatE D0871_10965 PF11066 Protein of unknown function (DUF2867) D0871_10965 PF13460 NAD(P)H-binding D0871_10970 PF03264 NapC/NirT cytochrome c family, N-terminal region D0871_10985 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) D0871_11000 PF07690 Major Facilitator Superfamily D0871_11005 PF01479 S4 domain D0871_11005 PF00849 RNA pseudouridylate synthase D0871_11010 PF00271 Helicase conserved C-terminal domain D0871_11010 PF04851 Type III restriction enzyme, res subunit D0871_11020 PF00072 Response regulator receiver domain D0871_11020 PF00486 Transcriptional regulatory protein, C terminal D0871_11025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_11025 PF00512 His Kinase A (phospho-acceptor) domain D0871_11025 PF00672 HAMP domain D0871_11030 PF01386 Ribosomal L25p family D0871_11045 PF02872 5'-nucleotidase, C-terminal domain D0871_11045 PF00149 Calcineurin-like phosphoesterase D0871_11060 PF06945 Protein of unknown function (DUF1289) D0871_11070 PF00196 Bacterial regulatory proteins, luxR family D0871_11070 PF00072 Response regulator receiver domain D0871_11075 PF00512 His Kinase A (phospho-acceptor) domain D0871_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_11085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0871_11085 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_11095 PF09335 SNARE associated Golgi protein D0871_11100 PF13416 Bacterial extracellular solute-binding protein D0871_11105 PF00528 Binding-protein-dependent transport system inner membrane component D0871_11110 PF00005 ABC transporter D0871_11115 PF01066 CDP-alcohol phosphatidyltransferase D0871_11130 PF00158 Sigma-54 interaction domain D0871_11130 PF01590 GAF domain D0871_11135 PF03063 Prismane/CO dehydrogenase family D0871_11140 PF00970 Oxidoreductase FAD-binding domain D0871_11140 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_11140 PF00175 Oxidoreductase NAD-binding domain D0871_11150 PF00849 RNA pseudouridylate synthase D0871_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_11155 PF00672 HAMP domain D0871_11155 PF12729 Four helix bundle sensory module for signal transduction D0871_11160 PF00209 Sodium:neurotransmitter symporter family D0871_11165 PF13091 PLD-like domain D0871_11165 PF13396 Phospholipase_D-nuclease N-terminal D0871_11170 PF01053 Cys/Met metabolism PLP-dependent enzyme D0871_11175 PF00561 alpha/beta hydrolase fold D0871_11180 PF03280 Proteobacterial lipase chaperone protein D0871_11185 PF03352 Methyladenine glycosylase D0871_11190 PF00873 AcrB/AcrD/AcrF family D0871_11195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_11200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_11205 PF04024 PspC domain D0871_11210 PF06667 Phage shock protein B D0871_11215 PF04012 PspA/IM30 family D0871_11220 PF00158 Sigma-54 interaction domain D0871_11220 PF02954 Bacterial regulatory protein, Fis family D0871_11225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_11230 PF00528 Binding-protein-dependent transport system inner membrane component D0871_11235 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_11235 PF00528 Binding-protein-dependent transport system inner membrane component D0871_11240 PF00005 ABC transporter D0871_11240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_11245 PF00005 ABC transporter D0871_11255 PF01368 DHH family D0871_11255 PF02833 DHHA2 domain D0871_11265 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0871_11265 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0871_11270 PF01568 Molydopterin dinucleotide binding domain D0871_11270 PF18364 Molybdopterin oxidoreductase N-terminal domain D0871_11270 PF00384 Molybdopterin oxidoreductase D0871_11275 PF03264 NapC/NirT cytochrome c family, N-terminal region D0871_11280 PF06796 Periplasmic nitrate reductase protein NapE D0871_11285 PF03649 Uncharacterised protein family (UPF0014) D0871_11295 PF01226 Formate/nitrite transporter D0871_11320 PF02698 DUF218 domain D0871_11325 PF00265 Thymidine kinase D0871_11330 PF01406 tRNA synthetases class I (C) catalytic domain D0871_11330 PF09190 DALR domain D0871_11335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0871_11340 PF00149 Calcineurin-like phosphoesterase D0871_11345 PF08668 HDOD domain D0871_11345 PF00563 EAL domain D0871_11355 PF02810 SEC-C motif D0871_11360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0871_11360 PF01502 Phosphoribosyl-AMP cyclohydrolase D0871_11365 PF00977 Histidine biosynthesis protein D0871_11370 PF00977 Histidine biosynthesis protein D0871_11375 PF00117 Glutamine amidotransferase class-I D0871_11380 PF08645 Polynucleotide kinase 3 phosphatase D0871_11380 PF00475 Imidazoleglycerol-phosphate dehydratase D0871_11385 PF00155 Aminotransferase class I and II D0871_11390 PF00815 Histidinol dehydrogenase D0871_11395 PF08029 HisG, C-terminal domain D0871_11395 PF01634 ATP phosphoribosyltransferase D0871_11400 PF02954 Bacterial regulatory protein, Fis family D0871_11400 PF00072 Response regulator receiver domain D0871_11400 PF00158 Sigma-54 interaction domain D0871_11410 PF03553 Na+/H+ antiporter family D0871_11415 PF00816 H-NS histone family D0871_11420 PF00294 pfkB family carbohydrate kinase D0871_11435 PF04356 Protein of unknown function (DUF489) D0871_11440 PF08328 Adenylosuccinate lyase C-terminal D0871_11440 PF00206 Lyase D0871_11480 PF00106 short chain dehydrogenase D0871_11490 PF01435 Peptidase family M48 D0871_11505 PF08241 Methyltransferase domain D0871_11510 PF00155 Aminotransferase class I and II D0871_11515 PF06968 Biotin and Thiamin Synthesis associated domain D0871_11515 PF04055 Radical SAM superfamily D0871_11525 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0871_11540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0871_11540 PF02403 Seryl-tRNA synthetase N-terminal domain D0871_11545 PF16193 AAA C-terminal domain D0871_11545 PF00004 ATPase family associated with various cellular activities (AAA) D0871_11545 PF12002 MgsA AAA+ ATPase C terminal D0871_11550 PF03548 Outer membrane lipoprotein carrier protein LolA D0871_11555 PF09397 Ftsk gamma domain D0871_11555 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0871_11555 PF17854 FtsK alpha domain D0871_11555 PF01580 FtsK/SpoIIIE family D0871_11560 PF01037 Lrp/AsnC ligand binding domain D0871_11565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0871_11565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0871_11575 PF03466 LysR substrate binding domain D0871_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_11585 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0871_11590 PF03372 Endonuclease/Exonuclease/phosphatase family D0871_11600 PF00579 tRNA synthetases class I (W and Y) D0871_11620 PF00873 AcrB/AcrD/AcrF family D0871_11625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_11625 PF00529 HlyD membrane-fusion protein of T1SS D0871_11640 PF02743 Cache domain D0871_11640 PF00672 HAMP domain D0871_11640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_11670 PF00271 Helicase conserved C-terminal domain D0871_11670 PF00176 SNF2 family N-terminal domain D0871_11745 PF00092 von Willebrand factor type A domain D0871_11775 PF00589 Phage integrase family D0871_11775 PF13356 Arm DNA-binding domain D0871_11785 PF00239 Resolvase, N terminal domain D0871_11785 PF02796 Helix-turn-helix domain of resolvase D0871_11805 PF06610 L-alanine exporter D0871_11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_11810 PF09308 LuxQ, periplasmic D0871_11810 PF00512 His Kinase A (phospho-acceptor) domain D0871_11810 PF00072 Response regulator receiver domain D0871_11820 PF03738 Glutathionylspermidine synthase preATP-grasp D0871_11830 PF03994 Domain of Unknown Function (DUF350) D0871_11840 PF02445 Quinolinate synthetase A protein D0871_11845 PF16331 TolA binding protein trimerisation D0871_11845 PF13174 Tetratricopeptide repeat D0871_11850 PF00691 OmpA family D0871_11855 PF04052 TolB amino-terminal domain D0871_11855 PF07676 WD40-like Beta Propeller Repeat D0871_11865 PF02472 Biopolymer transport protein ExbD/TolR D0871_11870 PF01618 MotA/TolQ/ExbB proton channel family D0871_11875 PF03061 Thioesterase superfamily D0871_11885 PF08173 Membrane bound YbgT-like protein D0871_11890 PF02322 Cytochrome bd terminal oxidase subunit II D0871_11895 PF01654 Cytochrome bd terminal oxidase subunit I D0871_11900 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0871_11900 PF17864 RuvB AAA lid domain D0871_11900 PF05491 RuvB C-terminal winged helix domain D0871_11905 PF07499 RuvA, C-terminal domain D0871_11905 PF01330 RuvA N terminal domain D0871_11910 PF02203 Tar ligand binding domain homologue D0871_11910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_11910 PF00672 HAMP domain D0871_11915 PF02075 Crossover junction endodeoxyribonuclease RuvC D0871_11920 PF02938 GAD domain D0871_11920 PF00152 tRNA synthetases class II (D, K and N) D0871_11920 PF01336 OB-fold nucleic acid binding domain D0871_11925 PF01904 Protein of unknown function DUF72 D0871_11930 PF13649 Methyltransferase domain D0871_11935 PF08003 Protein of unknown function (DUF1698) D0871_11945 PF08443 RimK-like ATP-grasp domain D0871_11945 PF18030 RimK PreATP-grasp domain D0871_11955 PF08443 RimK-like ATP-grasp domain D0871_11955 PF18030 RimK PreATP-grasp domain D0871_11965 PF16330 MukB hinge domain D0871_11965 PF04310 MukB N-terminal D0871_11970 PF04288 MukE-like family D0871_11975 PF03882 MukF winged-helix domain D0871_11975 PF17192 MukF middle domain D0871_11975 PF17193 MukF C-terminal domain D0871_11985 PF02698 DUF218 domain D0871_11990 PF00486 Transcriptional regulatory protein, C terminal D0871_11990 PF00072 Response regulator receiver domain D0871_11995 PF02613 Nitrate reductase delta subunit D0871_12000 PF00356 Bacterial regulatory proteins, lacI family D0871_12005 PF04993 TfoX N-terminal domain D0871_12005 PF04994 TfoX C-terminal domain D0871_12025 PF00534 Glycosyl transferases group 1 D0871_12025 PF08323 Starch synthase catalytic domain D0871_12030 PF00483 Nucleotidyl transferase D0871_12035 PF08272 Topoisomerase I zinc-ribbon-like D0871_12035 PF01131 DNA topoisomerase D0871_12035 PF01751 Toprim domain D0871_12035 PF01396 Topoisomerase DNA binding C4 zinc finger D0871_12040 PF10692 Protein of unknown function (DUF2498) D0871_12045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0871_12055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0871_12060 PF04377 Arginine-tRNA-protein transferase, C terminus D0871_12060 PF04376 Arginine-tRNA-protein transferase, N terminus D0871_12065 PF01176 Translation initiation factor 1A / IF-1 D0871_12075 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_12075 PF00004 ATPase family associated with various cellular activities (AAA) D0871_12075 PF07724 AAA domain (Cdc48 subfamily) D0871_12075 PF17871 AAA lid domain D0871_12075 PF02861 Clp amino terminal domain, pathogenicity island component D0871_12080 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0871_12085 PF00313 'Cold-shock' DNA-binding domain D0871_12090 PF03971 Monomeric isocitrate dehydrogenase D0871_12095 PF00849 RNA pseudouridylate synthase D0871_12100 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0871_12110 PF06733 DEAD_2 D0871_12110 PF13307 Helicase C-terminal domain D0871_12115 PF01925 Sulfite exporter TauE/SafE D0871_12120 PF07445 Primosomal replication protein priC D0871_12125 PF10689 Protein of unknown function (DUF2496) D0871_12130 PF03372 Endonuclease/Exonuclease/phosphatase family D0871_12140 PF00528 Binding-protein-dependent transport system inner membrane component D0871_12145 PF00528 Binding-protein-dependent transport system inner membrane component D0871_12150 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_12155 PF00005 ABC transporter D0871_12175 PF01228 Glycine radical D0871_12175 PF02901 Pyruvate formate lyase-like D0871_12185 PF04055 Radical SAM superfamily D0871_12195 PF03887 YfbU domain D0871_12205 PF08298 PrkA AAA domain D0871_12205 PF06798 PrkA serine protein kinase C-terminal domain D0871_12210 PF04285 Protein of unknown function (DUF444) D0871_12215 PF04293 SpoVR like protein D0871_12220 PF02348 Cytidylyltransferase D0871_12225 PF03966 Trm112p-like protein D0871_12230 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0871_12235 PF00664 ABC transporter transmembrane region D0871_12235 PF00005 ABC transporter D0871_12240 PF13567 Domain of unknown function (DUF4131) D0871_12240 PF03772 Competence protein D0871_12240 PF00753 Metallo-beta-lactamase superfamily D0871_12250 PF02687 FtsX-like permease family D0871_12250 PF12704 MacB-like periplasmic core domain D0871_12255 PF00005 ABC transporter D0871_12260 PF12704 MacB-like periplasmic core domain D0871_12260 PF02687 FtsX-like permease family D0871_12270 PF17757 UvrB interaction domain D0871_12270 PF03461 TRCF domain D0871_12270 PF00271 Helicase conserved C-terminal domain D0871_12270 PF02559 CarD-like/TRCF domain D0871_12270 PF00270 DEAD/DEAH box helicase D0871_12285 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_12295 PF05728 Uncharacterised protein family (UPF0227) D0871_12305 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0871_12305 PF13036 Peptidoglycan-synthase activator LpoB D0871_12320 PF01230 HIT domain D0871_12325 PF00672 HAMP domain D0871_12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_12340 PF01048 Phosphorylase superfamily D0871_12345 PF00403 Heavy-metal-associated domain D0871_12350 PF00571 CBS domain D0871_12350 PF00478 IMP dehydrogenase / GMP reductase domain D0871_12365 PF11953 Domain of unknown function (DUF3470) D0871_12365 PF00037 4Fe-4S binding domain D0871_12370 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0871_12370 PF00588 SpoU rRNA Methylase family D0871_12380 PF17152 Periplasmic sensor domain D0871_12380 PF00990 Diguanylate cyclase, GGDEF domain D0871_12390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0871_12395 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0871_12410 PF01037 Lrp/AsnC ligand binding domain D0871_12410 PF13404 AsnC-type helix-turn-helix domain D0871_12415 PF00291 Pyridoxal-phosphate dependent enzyme D0871_12440 PF00873 AcrB/AcrD/AcrF family D0871_12445 PF13533 Biotin-lipoyl like D0871_12490 PF07690 Major Facilitator Superfamily D0871_12495 PF03601 Conserved hypothetical protein 698 D0871_12505 PF13193 AMP-binding enzyme C-terminal domain D0871_12505 PF00501 AMP-binding enzyme D0871_12510 PF13378 Enolase C-terminal domain-like D0871_12515 PF00378 Enoyl-CoA hydratase/isomerase D0871_12520 PF12697 Alpha/beta hydrolase family D0871_12525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0871_12525 PF16582 Middle domain of thiamine pyrophosphate D0871_12525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0871_12530 PF00425 chorismate binding enzyme D0871_12535 PF00155 Aminotransferase class I and II D0871_12545 PF13286 Phosphohydrolase-associated domain D0871_12545 PF01966 HD domain D0871_12565 PF13145 PPIC-type PPIASE domain D0871_12570 PF00216 Bacterial DNA-binding protein D0871_12575 PF05362 Lon protease (S16) C-terminal proteolytic domain D0871_12575 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0871_12575 PF00004 ATPase family associated with various cellular activities (AAA) D0871_12580 PF07724 AAA domain (Cdc48 subfamily) D0871_12580 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_12580 PF06689 ClpX C4-type zinc finger D0871_12585 PF00574 Clp protease D0871_12590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_12590 PF05697 Bacterial trigger factor protein (TF) D0871_12590 PF05698 Bacterial trigger factor protein (TF) C-terminus D0871_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_12595 PF00512 His Kinase A (phospho-acceptor) domain D0871_12595 PF02743 Cache domain D0871_12600 PF02954 Bacterial regulatory protein, Fis family D0871_12600 PF00158 Sigma-54 interaction domain D0871_12600 PF00072 Response regulator receiver domain D0871_12610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0871_12615 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0871_12620 PF03480 Bacterial extracellular solute-binding protein, family 7 D0871_12625 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0871_12645 PF02386 Cation transport protein D0871_12650 PF02080 TrkA-C domain D0871_12650 PF02254 TrkA-N domain D0871_12655 PF00270 DEAD/DEAH box helicase D0871_12655 PF00271 Helicase conserved C-terminal domain D0871_12660 PF01595 Cyclin M transmembrane N-terminal domain D0871_12660 PF00571 CBS domain D0871_12660 PF03471 Transporter associated domain D0871_12670 PF04820 Tryptophan halogenase D0871_12695 PF00550 Phosphopantetheine attachment site D0871_12700 PF00550 Phosphopantetheine attachment site D0871_12710 PF13193 AMP-binding enzyme C-terminal domain D0871_12710 PF00501 AMP-binding enzyme D0871_12715 PF07977 FabA-like domain D0871_12720 PF00535 Glycosyl transferase family 2 D0871_12725 PF00221 Aromatic amino acid lyase D0871_12750 PF02801 Beta-ketoacyl synthase, C-terminal domain D0871_12750 PF00109 Beta-ketoacyl synthase, N-terminal domain D0871_12755 PF07977 FabA-like domain D0871_12765 PF02801 Beta-ketoacyl synthase, C-terminal domain D0871_12765 PF00109 Beta-ketoacyl synthase, N-terminal domain D0871_12780 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0871_12780 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0871_12785 PF07670 Nucleoside recognition D0871_12785 PF07662 Na+ dependent nucleoside transporter C-terminus D0871_12785 PF01773 Na+ dependent nucleoside transporter N-terminus D0871_12790 PF03466 LysR substrate binding domain D0871_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_12795 PF13406 Transglycosylase SLT domain D0871_12800 PF05166 YcgL domain D0871_12805 PF03775 Septum formation inhibitor MinC, C-terminal domain D0871_12805 PF05209 Septum formation inhibitor MinC, N-terminal domain D0871_12810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0871_12815 PF03776 Septum formation topological specificity factor MinE D0871_12820 PF00570 HRDC domain D0871_12820 PF01612 3'-5' exonuclease D0871_12825 PF00501 AMP-binding enzyme D0871_12825 PF13193 AMP-binding enzyme C-terminal domain D0871_12830 PF00561 alpha/beta hydrolase fold D0871_12845 PF00814 Glycoprotease family D0871_12850 PF04851 Type III restriction enzyme, res subunit D0871_12850 PF13307 Helicase C-terminal domain D0871_12855 PF01842 ACT domain D0871_12855 PF00551 Formyl transferase D0871_12860 PF06185 YecM protein D0871_12870 PF00750 tRNA synthetases class I (R) D0871_12870 PF03485 Arginyl tRNA synthetase N terminal domain D0871_12870 PF05746 DALR anticodon binding domain D0871_12885 PF17910 FeoB cytosolic helical domain D0871_12885 PF02421 Ferrous iron transport protein B D0871_12885 PF07664 Ferrous iron transport protein B C terminus D0871_12885 PF07670 Nucleoside recognition D0871_12890 PF04023 FeoA domain D0871_12905 PF02311 AraC-like ligand binding domain D0871_12905 PF12833 Helix-turn-helix domain D0871_12910 PF01297 Zinc-uptake complex component A periplasmic D0871_12915 PF00005 ABC transporter D0871_12920 PF00950 ABC 3 transport family D0871_12925 PF00549 CoA-ligase D0871_12925 PF02629 CoA binding domain D0871_12930 PF08442 ATP-grasp domain D0871_12930 PF00549 CoA-ligase D0871_12935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0871_12935 PF00364 Biotin-requiring enzyme D0871_12935 PF02817 e3 binding domain D0871_12940 PF16078 2-oxoglutarate dehydrogenase N-terminus D0871_12940 PF02779 Transketolase, pyrimidine binding domain D0871_12940 PF00676 Dehydrogenase E1 component D0871_12940 PF16870 2-oxoglutarate dehydrogenase C-terminal D0871_12945 PF13085 2Fe-2S iron-sulfur cluster binding domain D0871_12950 PF02910 Fumarate reductase flavoprotein C-term D0871_12950 PF00890 FAD binding domain D0871_12955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0871_12960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0871_12965 PF00285 Citrate synthase, C-terminal domain D0871_12970 PF01784 NIF3 (NGG1p interacting factor 3) D0871_12980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0871_12980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0871_12980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0871_12980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0871_12985 PF17206 SeqA protein N-terminal domain D0871_12985 PF03925 SeqA protein C-terminal domain D0871_12990 PF12697 Alpha/beta hydrolase family D0871_13000 PF00258 Flavodoxin D0871_13010 PF01475 Ferric uptake regulator family D0871_13015 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0871_13015 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0871_13020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0871_13020 PF02378 Phosphotransferase system, EIIC D0871_13020 PF00367 phosphotransferase system, EIIB D0871_13030 PF01979 Amidohydrolase family D0871_13035 PF01047 MarR family D0871_13035 PF00480 ROK family D0871_13040 PF02254 TrkA-N domain D0871_13040 PF00999 Sodium/hydrogen exchanger family D0871_13045 PF13537 Glutamine amidotransferase domain D0871_13045 PF00733 Asparagine synthase D0871_13050 PF02357 Transcription termination factor nusG D0871_13055 PF00854 POT family D0871_13060 PF00762 Ferrochelatase D0871_13065 PF05191 Adenylate kinase, active site lid D0871_13070 PF00183 Hsp90 protein D0871_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_13075 PF00486 Transcriptional regulatory protein, C terminal D0871_13080 PF17323 Trans-membrane regulatory protein ToxS D0871_13095 PF12850 Calcineurin-like phosphoesterase superfamily domain D0871_13115 PF07556 Protein of unknown function (DUF1538) D0871_13120 PF07556 Protein of unknown function (DUF1538) D0871_13125 PF01370 NAD dependent epimerase/dehydratase family D0871_13125 PF08338 Domain of unknown function (DUF1731) D0871_13130 PF00106 short chain dehydrogenase D0871_13140 PF00085 Thioredoxin D0871_13145 PF01145 SPFH domain / Band 7 family D0871_13145 PF16200 C-terminal region of band_7 D0871_13160 PF03573 outer membrane porin, OprD family D0871_13175 PF12826 Helix-hairpin-helix motif D0871_13175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0871_13175 PF03120 NAD-dependent DNA ligase OB-fold domain D0871_13175 PF00533 BRCA1 C Terminus (BRCT) domain D0871_13175 PF01653 NAD-dependent DNA ligase adenylation domain D0871_13180 PF04354 ZipA, C-terminal FtsZ-binding domain D0871_13190 PF00291 Pyridoxal-phosphate dependent enzyme D0871_13200 PF00381 PTS HPr component phosphorylation site D0871_13205 PF02896 PEP-utilising enzyme, TIM barrel domain D0871_13205 PF00391 PEP-utilising enzyme, mobile domain D0871_13205 PF05524 PEP-utilising enzyme, N-terminal D0871_13210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0871_13220 PF00700 Bacterial flagellin C-terminal helical region D0871_13220 PF07196 Flagellin hook IN motif D0871_13220 PF00669 Bacterial flagellin N-terminal helical region D0871_13225 PF00700 Bacterial flagellin C-terminal helical region D0871_13225 PF07196 Flagellin hook IN motif D0871_13225 PF00669 Bacterial flagellin N-terminal helical region D0871_13235 PF00700 Bacterial flagellin C-terminal helical region D0871_13235 PF07196 Flagellin hook IN motif D0871_13235 PF00669 Bacterial flagellin N-terminal helical region D0871_13245 PF00669 Bacterial flagellin N-terminal helical region D0871_13250 PF07196 Flagellin hook IN motif D0871_13250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_13255 PF10135 Rod binding protein D0871_13255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0871_13260 PF02119 Flagellar P-ring protein D0871_13265 PF02107 Flagellar L-ring protein D0871_13270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_13270 PF00460 Flagella basal body rod protein D0871_13275 PF00460 Flagella basal body rod protein D0871_13275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_13285 PF00460 Flagella basal body rod protein D0871_13285 PF07559 Flagellar basal body protein FlaE D0871_13285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_13290 PF03963 Flagellar hook capping protein - N-terminal region D0871_13290 PF13860 FlgD Ig-like domain D0871_13290 PF13861 FlgD Tudor-like domain D0871_13295 PF00460 Flagella basal body rod protein D0871_13295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_13300 PF00460 Flagella basal body rod protein D0871_13305 PF01739 CheR methyltransferase, SAM binding domain D0871_13305 PF03705 CheR methyltransferase, all-alpha domain D0871_13310 PF00072 Response regulator receiver domain D0871_13310 PF01584 CheW-like domain D0871_13360 PF00691 OmpA family D0871_13360 PF01389 OmpA-like transmembrane domain D0871_13370 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0871_13375 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0871_13380 PF13609 Gram-negative porin D0871_13390 PF00403 Heavy-metal-associated domain D0871_13405 PF03173 Putative carbohydrate binding domain D0871_13405 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D0871_13405 PF00728 Glycosyl hydrolase family 20, catalytic domain D0871_13405 PF02838 Glycosyl hydrolase family 20, domain 2 D0871_13430 PF01713 Smr domain D0871_13435 PF00849 RNA pseudouridylate synthase D0871_13435 PF01479 S4 domain D0871_13440 PF04073 Aminoacyl-tRNA editing domain D0871_13445 PF00149 Calcineurin-like phosphoesterase D0871_13445 PF02872 5'-nucleotidase, C-terminal domain D0871_13450 PF00793 DAHP synthetase I family D0871_13455 PF13369 Transglutaminase-like superfamily D0871_13460 PF04247 Invasion gene expression up-regulator, SirB D0871_13465 PF17827 PrmC N-terminal domain D0871_13465 PF13847 Methyltransferase domain D0871_13470 PF00472 RF-1 domain D0871_13470 PF03462 PCRF domain D0871_13475 PF01488 Shikimate / quinate 5-dehydrogenase D0871_13475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0871_13475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0871_13480 PF03550 Outer membrane lipoprotein LolB D0871_13485 PF08544 GHMP kinases C terminal D0871_13485 PF00288 GHMP kinases N terminal domain D0871_13490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0871_13490 PF14572 Phosphoribosyl synthetase-associated domain D0871_13495 PF01195 Peptidyl-tRNA hydrolase D0871_13500 PF06071 Protein of unknown function (DUF933) D0871_13500 PF01926 50S ribosome-binding GTPase D0871_13615 PF01494 FAD binding domain D0871_13625 PF00919 Uncharacterized protein family UPF0004 D0871_13625 PF04055 Radical SAM superfamily D0871_13625 PF01938 TRAM domain D0871_13630 PF02562 PhoH-like protein D0871_13635 PF02130 Uncharacterized protein family UPF0054 D0871_13640 PF00571 CBS domain D0871_13640 PF03471 Transporter associated domain D0871_13645 PF00795 Carbon-nitrogen hydrolase D0871_13650 PF07295 Zinc-ribbon containing domain D0871_13655 PF13603 Leucyl-tRNA synthetase, Domain 2 D0871_13655 PF00133 tRNA synthetases class I (I, L, M and V) D0871_13655 PF08264 Anticodon-binding domain of tRNA D0871_13660 PF04390 Lipopolysaccharide-assembly D0871_13665 PF06144 DNA polymerase III, delta subunit D0871_13665 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0871_13675 PF02590 Predicted SPOUT methyltransferase D0871_13680 PF00905 Penicillin binding protein transpeptidase domain D0871_13680 PF03717 Penicillin-binding Protein dimerisation domain D0871_13685 PF01098 Cell cycle protein D0871_13690 PF03330 Lytic transglycolase D0871_13690 PF05036 Sporulation related domain D0871_13695 PF00768 D-alanyl-D-alanine carboxypeptidase D0871_13695 PF07943 Penicillin-binding protein 5, C-terminal domain D0871_13700 PF04359 Protein of unknown function (DUF493) D0871_13705 PF03099 Biotin/lipoate A/B protein ligase family D0871_13710 PF04055 Radical SAM superfamily D0871_13710 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0871_13715 PF00464 Serine hydroxymethyltransferase D0871_13735 PF00128 Alpha amylase, catalytic domain D0871_13735 PF16657 Maltogenic Amylase, C-terminal domain D0871_13740 PF02378 Phosphotransferase system, EIIC D0871_13740 PF00367 phosphotransferase system, EIIB D0871_13745 PF00356 Bacterial regulatory proteins, lacI family D0871_13760 PF00005 ABC transporter D0871_13760 PF09383 NIL domain D0871_13765 PF00528 Binding-protein-dependent transport system inner membrane component D0871_13770 PF03180 NLPA lipoprotein D0871_13775 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D0871_13780 PF07348 Syd protein (SUKH-2) D0871_13785 PF14489 QueF-like protein D0871_13785 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0871_13795 PF00990 Diguanylate cyclase, GGDEF domain D0871_13800 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0871_13800 PF03641 Possible lysine decarboxylase D0871_13800 PF11892 Domain of unknown function (DUF3412) D0871_13805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0871_13805 PF01367 5'-3' exonuclease, C-terminal SAM fold D0871_13810 PF01223 DNA/RNA non-specific endonuclease D0871_13815 PF01728 FtsJ-like methyltransferase D0871_13815 PF18125 RlmM ferredoxin-like domain D0871_13820 PF04241 Protein of unknown function (DUF423) D0871_13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_13830 PF03466 LysR substrate binding domain D0871_13835 PF02568 Thiamine biosynthesis protein (ThiI) D0871_13835 PF02926 THUMP domain D0871_13840 PF00691 OmpA family D0871_13845 PF01618 MotA/TolQ/ExbB proton channel family D0871_13850 PF02609 Exonuclease VII small subunit D0871_13855 PF00348 Polyprenyl synthetase D0871_13860 PF02780 Transketolase, C-terminal domain D0871_13860 PF02779 Transketolase, pyrimidine binding domain D0871_13860 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0871_13865 PF04608 Phosphatidylglycerophosphatase A D0871_13870 PF02769 AIR synthase related protein, C-terminal domain D0871_13870 PF00586 AIR synthase related protein, N-terminal domain D0871_13875 PF01029 NusB family D0871_13880 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0871_13885 PF00925 GTP cyclohydrolase II D0871_13885 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0871_13890 PF00677 Lumazine binding domain D0871_13895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0871_13895 PF01872 RibD C-terminal domain D0871_13900 PF03477 ATP cone domain D0871_13905 PF00171 Aldehyde dehydrogenase family D0871_13910 PF00696 Amino acid kinase family D0871_13910 PF01472 PUA domain D0871_13915 PF07417 Sigma factor-binding transcriptional regulator Crl D0871_13925 PF00156 Phosphoribosyl transferase domain D0871_13930 PF00860 Permease family D0871_13935 PF07687 Peptidase dimerisation domain D0871_13935 PF01546 Peptidase family M20/M25/M40 D0871_13960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D0871_13960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D0871_13960 PF02769 AIR synthase related protein, C-terminal domain D0871_13965 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_13965 PF01464 Transglycosylase SLT domain D0871_13975 PF14437 MafB19-like deaminase D0871_13980 PF03806 AbgT putative transporter family D0871_14005 PF00114 Pilin (bacterial filament) D0871_14005 PF07963 Prokaryotic N-terminal methylation motif D0871_14010 PF07963 Prokaryotic N-terminal methylation motif D0871_14010 PF00114 Pilin (bacterial filament) D0871_14020 PF01556 DnaJ C terminal domain D0871_14020 PF00684 DnaJ central domain D0871_14020 PF00226 DnaJ domain D0871_14025 PF00012 Hsp70 protein D0871_14030 PF00375 Sodium:dicarboxylate symporter family D0871_14035 PF01025 GrpE D0871_14040 PF01513 ATP-NAD kinase D0871_14050 PF02463 RecF/RecN/SMC N terminal domain D0871_14055 PF04355 SmpA / OmlA family D0871_14060 PF03658 RnfH family Ubiquitin D0871_14065 PF03364 Polyketide cyclase / dehydrase and lipid transport D0871_14070 PF01668 SmpB protein D0871_14080 PF00589 Phage integrase family D0871_14080 PF13356 Arm DNA-binding domain D0871_14130 PF03466 LysR substrate binding domain D0871_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_14135 PF00583 Acetyltransferase (GNAT) family D0871_14135 PF00795 Carbon-nitrogen hydrolase D0871_14155 PF00202 Aminotransferase class-III D0871_14160 PF01053 Cys/Met metabolism PLP-dependent enzyme D0871_14165 PF07969 Amidohydrolase family D0871_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_14185 PF03466 LysR substrate binding domain D0871_14190 PF01266 FAD dependent oxidoreductase D0871_14195 PF01235 Sodium:alanine symporter family D0871_14205 PF01184 GPR1/FUN34/yaaH family D0871_14210 PF00704 Glycosyl hydrolases family 18 D0871_14210 PF06483 Chitinase C D0871_14215 PF03553 Na+/H+ antiporter family D0871_14220 PF02540 NAD synthase D0871_14220 PF00117 Glutamine amidotransferase class-I D0871_14220 PF00958 GMP synthase C terminal domain D0871_14225 PF00571 CBS domain D0871_14225 PF00478 IMP dehydrogenase / GMP reductase domain D0871_14230 PF13742 OB-fold nucleic acid binding domain D0871_14230 PF02601 Exonuclease VII, large subunit D0871_14245 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0871_14245 PF01926 50S ribosome-binding GTPase D0871_14250 PF13360 PQQ-like domain D0871_14255 PF09976 Tetratricopeptide repeat-like domain D0871_14260 PF03129 Anticodon binding domain D0871_14260 PF13393 Histidyl-tRNA synthetase D0871_14265 PF04551 GcpE protein D0871_14270 PF13464 Domain of unknown function (DUF4115) D0871_14280 PF04055 Radical SAM superfamily D0871_14285 PF00334 Nucleoside diphosphate kinase D0871_14290 PF12404 Peptidase D0871_14290 PF00883 Cytosol aminopeptidase family, catalytic domain D0871_14295 PF04384 Iron-sulphur cluster assembly D0871_14300 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_14305 PF00012 Hsp70 protein D0871_14310 PF00226 DnaJ domain D0871_14310 PF07743 HSCB C-terminal oligomerisation domain D0871_14315 PF01521 Iron-sulphur cluster biosynthesis D0871_14320 PF01592 NifU-like N terminal domain D0871_14325 PF00266 Aminotransferase class-V D0871_14330 PF02082 Transcriptional regulator D0871_14335 PF00588 SpoU rRNA Methylase family D0871_14340 PF00459 Inositol monophosphatase family D0871_14350 PF07549 SecD/SecF GG Motif D0871_14350 PF02355 Protein export membrane protein D0871_14355 PF07549 SecD/SecF GG Motif D0871_14355 PF13721 SecD export protein N-terminal TM region D0871_14355 PF02355 Protein export membrane protein D0871_14360 PF02699 Preprotein translocase subunit D0871_14365 PF01702 Queuine tRNA-ribosyltransferase D0871_14370 PF02547 Queuosine biosynthesis protein D0871_14385 PF00571 CBS domain D0871_14390 PF00463 Isocitrate lyase family D0871_14395 PF01274 Malate synthase D0871_14405 PF03466 LysR substrate binding domain D0871_14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_14410 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0871_14410 PF00578 AhpC/TSA family D0871_14420 PF03932 CutC family D0871_14425 PF03976 Polyphosphate kinase 2 (PPK2) D0871_14430 PF01895 PhoU domain D0871_14435 PF00005 ABC transporter D0871_14440 PF00528 Binding-protein-dependent transport system inner membrane component D0871_14445 PF00528 Binding-protein-dependent transport system inner membrane component D0871_14450 PF13090 Polyphosphate kinase C-terminal domain 2 D0871_14450 PF02503 Polyphosphate kinase middle domain D0871_14450 PF17941 Polyphosphate kinase C-terminal domain 1 D0871_14450 PF13089 Polyphosphate kinase N-terminal domain D0871_14455 PF02541 Ppx/GppA phosphatase family D0871_14460 PF12849 PBP superfamily domain D0871_14465 PF00989 PAS fold D0871_14465 PF00512 His Kinase A (phospho-acceptor) domain D0871_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_14465 PF11808 Phosphate regulon sensor protein PhoR D0871_14470 PF00072 Response regulator receiver domain D0871_14470 PF00486 Transcriptional regulatory protein, C terminal D0871_14480 PF04381 Putative exonuclease, RdgC D0871_14490 PF00037 4Fe-4S binding domain D0871_14500 PF03411 Penicillin-insensitive murein endopeptidase D0871_14550 PF17871 AAA lid domain D0871_14550 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_14550 PF00004 ATPase family associated with various cellular activities (AAA) D0871_14550 PF02861 Clp amino terminal domain, pathogenicity island component D0871_14550 PF07724 AAA domain (Cdc48 subfamily) D0871_14560 PF01479 S4 domain D0871_14560 PF00849 RNA pseudouridylate synthase D0871_14565 PF13525 Outer membrane lipoprotein D0871_14570 PF01464 Transglycosylase SLT domain D0871_14575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0871_14580 PF00800 Prephenate dehydratase D0871_14580 PF01817 Chorismate mutase type II D0871_14585 PF01931 Protein of unknown function DUF84 D0871_14590 PF01371 Trp repressor protein D0871_14595 PF01464 Transglycosylase SLT domain D0871_14595 PF14718 Soluble lytic murein transglycosylase L domain D0871_14600 PF00005 ABC transporter D0871_14600 PF12848 ABC transporter D0871_14610 PF07238 PilZ domain D0871_14615 PF04225 Opacity-associated protein A LysM-like domain D0871_14615 PF01551 Peptidase family M23 D0871_14620 PF02153 Prephenate dehydrogenase D0871_14620 PF01817 Chorismate mutase type II D0871_14625 PF00793 DAHP synthetase I family D0871_14630 PF00933 Glycosyl hydrolase family 3 N terminal domain D0871_14635 PF03702 Anhydro-N-acetylmuramic acid kinase D0871_14640 PF13580 SIS domain D0871_14655 PF02554 Carbon starvation protein CstA D0871_14660 PF06580 Histidine kinase D0871_14660 PF07694 5TMR of 5TMR-LYT D0871_14665 PF00072 Response regulator receiver domain D0871_14665 PF04397 LytTr DNA-binding domain D0871_14670 PF02401 LytB protein D0871_14675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_14680 PF01252 Signal peptidase (SPase) II D0871_14685 PF06827 Zinc finger found in FPG and IleRS D0871_14685 PF00133 tRNA synthetases class I (I, L, M and V) D0871_14685 PF08264 Anticodon-binding domain of tRNA D0871_14690 PF06574 FAD synthetase D0871_14690 PF01687 Riboflavin kinase D0871_14695 PF03023 Lipid II flippase MurJ D0871_14700 PF01649 Ribosomal protein S20 D0871_14710 PF01022 Bacterial regulatory protein, arsR family D0871_14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_14720 PF03466 LysR substrate binding domain D0871_14725 PF02690 Na+/Pi-cotransporter D0871_14735 PF00303 Thymidylate synthase D0871_14740 PF01790 Prolipoprotein diacylglyceryl transferase D0871_14745 PF01925 Sulfite exporter TauE/SafE D0871_14750 PF01590 GAF domain D0871_14750 PF00391 PEP-utilising enzyme, mobile domain D0871_14750 PF02896 PEP-utilising enzyme, TIM barrel domain D0871_14750 PF05524 PEP-utilising enzyme, N-terminal D0871_14755 PF00293 NUDIX domain D0871_14765 PF02976 DNA mismatch repair enzyme MutH D0871_14775 PF00248 Aldo/keto reductase family D0871_14785 PF00158 Sigma-54 interaction domain D0871_14785 PF00072 Response regulator receiver domain D0871_14785 PF02954 Bacterial regulatory protein, Fis family D0871_14790 PF00152 tRNA synthetases class II (D, K and N) D0871_14790 PF01336 OB-fold nucleic acid binding domain D0871_14800 PF02272 DHHA1 domain D0871_14800 PF17768 RecJ OB domain D0871_14800 PF01368 DHH family D0871_14805 PF10411 Disulfide bond isomerase protein N-terminus D0871_14805 PF13098 Thioredoxin-like domain D0871_14810 PF02899 Phage integrase, N-terminal SAM-like domain D0871_14810 PF00589 Phage integrase family D0871_14815 PF00258 Flavodoxin D0871_14820 PF05525 Branched-chain amino acid transport protein D0871_14825 PF05175 Methyltransferase small domain D0871_14830 PF00271 Helicase conserved C-terminal domain D0871_14830 PF00270 DEAD/DEAH box helicase D0871_14835 PF03883 Peroxide stress protein YaaA D0871_14840 PF01235 Sodium:alanine symporter family D0871_14855 PF03167 Uracil DNA glycosylase superfamily D0871_14865 PF01261 Xylose isomerase-like TIM barrel D0871_14870 PF01228 Glycine radical D0871_14875 PF00291 Pyridoxal-phosphate dependent enzyme D0871_14875 PF14821 Threonine synthase N terminus D0871_14880 PF00288 GHMP kinases N terminal domain D0871_14880 PF08544 GHMP kinases C terminal D0871_14885 PF03447 Homoserine dehydrogenase, NAD binding domain D0871_14885 PF00742 Homoserine dehydrogenase D0871_14885 PF13840 ACT domain D0871_14885 PF01842 ACT domain D0871_14885 PF00696 Amino acid kinase family D0871_14895 PF03737 Aldolase/RraA D0871_14910 PF00486 Transcriptional regulatory protein, C terminal D0871_14910 PF00072 Response regulator receiver domain D0871_14920 PF00072 Response regulator receiver domain D0871_14920 PF00989 PAS fold D0871_14920 PF01627 Hpt domain D0871_14920 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0871_14920 PF00512 His Kinase A (phospho-acceptor) domain D0871_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_14925 PF00563 EAL domain D0871_14925 PF00360 Phytochrome region D0871_14925 PF00990 Diguanylate cyclase, GGDEF domain D0871_14925 PF01590 GAF domain D0871_14930 PF16199 Radical_SAM C-terminal domain D0871_14930 PF04055 Radical SAM superfamily D0871_14935 PF00310 Glutamine amidotransferases class-II D0871_14935 PF04898 Glutamate synthase central domain D0871_14935 PF01645 Conserved region in glutamate synthase D0871_14935 PF01493 GXGXG motif D0871_14940 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_14940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0871_14945 PF00310 Glutamine amidotransferases class-II D0871_14945 PF01645 Conserved region in glutamate synthase D0871_14945 PF04898 Glutamate synthase central domain D0871_14945 PF01493 GXGXG motif D0871_14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_14950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0871_14960 PF01048 Phosphorylase superfamily D0871_14965 PF03186 CobD/Cbib protein D0871_14965 PF17113 Regulatory signalling modulator protein AmpE D0871_14970 PF01497 Periplasmic binding protein D0871_14975 PF03458 UPF0126 domain D0871_14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_14980 PF03466 LysR substrate binding domain D0871_14985 PF01925 Sulfite exporter TauE/SafE D0871_15000 PF02142 MGS-like domain D0871_15000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0871_15000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0871_15005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0871_15005 PF00117 Glutamine amidotransferase class-I D0871_15010 PF01113 Dihydrodipicolinate reductase, N-terminus D0871_15010 PF05173 Dihydrodipicolinate reductase, C-terminus D0871_15015 PF00293 NUDIX domain D0871_15020 PF07516 SecA Wing and Scaffold domain D0871_15020 PF01043 SecA preprotein cross-linking domain D0871_15020 PF07517 SecA DEAD-like domain D0871_15020 PF02810 SEC-C motif D0871_15030 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0871_15035 PF12327 FtsZ family, C-terminal domain D0871_15035 PF00091 Tubulin/FtsZ family, GTPase domain D0871_15040 PF02491 SHS2 domain inserted in FTSA D0871_15045 PF08478 POTRA domain, FtsQ-type D0871_15045 PF03799 Cell division protein FtsQ D0871_15050 PF01225 Mur ligase family, catalytic domain D0871_15050 PF08245 Mur ligase middle domain D0871_15050 PF02875 Mur ligase family, glutamate ligase domain D0871_15055 PF03033 Glycosyltransferase family 28 N-terminal domain D0871_15055 PF04101 Glycosyltransferase family 28 C-terminal domain D0871_15060 PF01098 Cell cycle protein D0871_15065 PF08245 Mur ligase middle domain D0871_15065 PF02875 Mur ligase family, glutamate ligase domain D0871_15070 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0871_15070 PF00953 Glycosyl transferase family 4 D0871_15075 PF08245 Mur ligase middle domain D0871_15075 PF01225 Mur ligase family, catalytic domain D0871_15075 PF02875 Mur ligase family, glutamate ligase domain D0871_15080 PF08245 Mur ligase middle domain D0871_15080 PF01225 Mur ligase family, catalytic domain D0871_15080 PF02875 Mur ligase family, glutamate ligase domain D0871_15085 PF03717 Penicillin-binding Protein dimerisation domain D0871_15085 PF00905 Penicillin binding protein transpeptidase domain D0871_15090 PF04999 Cell division protein FtsL D0871_15095 PF01795 MraW methylase family D0871_15110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0871_15115 PF04348 LppC putative lipoprotein D0871_15120 PF02021 Uncharacterised protein family UPF0102 D0871_15125 PF13580 SIS domain D0871_15130 PF04972 BON domain D0871_15135 PF04386 Stringent starvation protein B D0871_15140 PF00043 Glutathione S-transferase, C-terminal domain D0871_15140 PF02798 Glutathione S-transferase, N-terminal domain D0871_15145 PF02167 Cytochrome C1 family D0871_15150 PF00032 Cytochrome b(C-terminal)/b6/petD D0871_15150 PF00033 Cytochrome b/b6/petB D0871_15155 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D0871_15155 PF00355 Rieske [2Fe-2S] domain D0871_15160 PF00380 Ribosomal protein S9/S16 D0871_15165 PF00572 Ribosomal protein L13 D0871_15175 PF03969 AFG1-like ATPase D0871_15185 PF06295 Protein of unknown function (DUF1043) D0871_15190 PF00595 PDZ domain D0871_15195 PF13180 PDZ domain D0871_15200 PF03989 DNA gyrase C-terminal domain, beta-propeller D0871_15200 PF00521 DNA gyrase/topoisomerase IV, subunit A D0871_15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_15205 PF00204 DNA gyrase B D0871_15205 PF01751 Toprim domain D0871_15205 PF00986 DNA gyrase B subunit, carboxyl terminus D0871_15210 PF05728 Uncharacterised protein family (UPF0227) D0871_15215 PF00149 Calcineurin-like phosphoesterase D0871_15220 PF06853 Protein of unknown function (DUF1249) D0871_15225 PF00293 NUDIX domain D0871_15230 PF02321 Outer membrane efflux protein D0871_15235 PF01467 Cytidylyltransferase-like D0871_15235 PF00294 pfkB family carbohydrate kinase D0871_15240 PF08335 GlnD PII-uridylyltransferase D0871_15240 PF03710 Glutamate-ammonia ligase adenylyltransferase D0871_15245 PF00672 HAMP domain D0871_15245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_15255 PF01928 CYTH domain D0871_15260 PF01865 Protein of unknown function DUF47 D0871_15265 PF01384 Phosphate transporter family D0871_15270 PF08239 Bacterial SH3 domain D0871_15280 PF01471 Putative peptidoglycan binding domain D0871_15280 PF13401 AAA domain D0871_15285 PF12627 Probable RNA and SrmB- binding site of polymerase A D0871_15285 PF01743 Poly A polymerase head domain D0871_15285 PF01966 HD domain D0871_15290 PF02673 Bacitracin resistance protein BacA D0871_15295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0871_15300 PF02152 Dihydroneopterin aldolase D0871_15305 PF02660 Glycerol-3-phosphate acyltransferase D0871_15310 PF12697 Alpha/beta hydrolase family D0871_15315 PF00814 Glycoprotease family D0871_15320 PF01165 Ribosomal protein S21 D0871_15325 PF09424 Yqey-like protein D0871_15330 PF08275 DNA primase catalytic core, N-terminal domain D0871_15330 PF08278 DNA primase DnaG DnaB-binding D0871_15330 PF10410 DnaB-helicase binding domain of primase D0871_15330 PF01807 CHC2 zinc finger D0871_15335 PF04546 Sigma-70, non-essential region D0871_15335 PF00140 Sigma-70 factor, region 1.2 D0871_15335 PF04542 Sigma-70 region 2 D0871_15335 PF03979 Sigma-70 factor, region 1.1 D0871_15335 PF04539 Sigma-70 region 3 D0871_15335 PF04545 Sigma-70, region 4 D0871_15395 PF13356 Arm DNA-binding domain D0871_15395 PF00589 Phage integrase family D0871_15395 PF14659 Phage integrase, N-terminal SAM-like domain D0871_15400 PF03180 NLPA lipoprotein D0871_15435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_15435 PF02378 Phosphotransferase system, EIIC D0871_15435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_15440 PF01232 Mannitol dehydrogenase Rossmann domain D0871_15440 PF08125 Mannitol dehydrogenase C-terminal domain D0871_15445 PF05068 Mannitol repressor D0871_15450 PF13419 Haloacid dehalogenase-like hydrolase D0871_15455 PF00672 HAMP domain D0871_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_15455 PF00512 His Kinase A (phospho-acceptor) domain D0871_15460 PF00486 Transcriptional regulatory protein, C terminal D0871_15460 PF00072 Response regulator receiver domain D0871_15470 PF01380 SIS domain D0871_15475 PF00455 DeoR C terminal sensor domain D0871_15475 PF08220 DeoR-like helix-turn-helix domain D0871_15485 PF00224 Pyruvate kinase, barrel domain D0871_15485 PF02887 Pyruvate kinase, alpha/beta domain D0871_15495 PF00990 Diguanylate cyclase, GGDEF domain D0871_15495 PF07694 5TMR of 5TMR-LYT D0871_15500 PF10369 Small subunit of acetolactate synthase D0871_15505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0871_15505 PF00205 Thiamine pyrophosphate enzyme, central domain D0871_15505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0871_15510 PF00501 AMP-binding enzyme D0871_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_15515 PF03466 LysR substrate binding domain D0871_15535 PF00682 HMGL-like D0871_15535 PF08502 LeuA allosteric (dimerisation) domain D0871_15540 PF00180 Isocitrate/isopropylmalate dehydrogenase D0871_15545 PF00330 Aconitase family (aconitate hydratase) D0871_15550 PF00694 Aconitase C-terminal domain D0871_15560 PF00226 DnaJ domain D0871_15560 PF05099 Tellurite resistance protein TerB D0871_15565 PF03968 OstA-like protein D0871_15565 PF04453 LPS transport system D D0871_15570 PF09312 SurA N-terminal domain D0871_15575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0871_15580 PF00398 Ribosomal RNA adenine dimethylase D0871_15585 PF04379 ApaG domain D0871_15590 PF00149 Calcineurin-like phosphoesterase D0871_15595 PF00186 Dihydrofolate reductase D0871_15600 PF12821 Threonine/Serine exporter, ThrE D0871_15605 PF06738 Putative threonine/serine exporter D0871_15610 PF01926 50S ribosome-binding GTPase D0871_15610 PF01018 GTP1/OBG D0871_15615 PF01016 Ribosomal L27 protein D0871_15620 PF00829 Ribosomal prokaryotic L21 protein D0871_15625 PF00348 Polyprenyl synthetase D0871_15635 PF00056 lactate/malate dehydrogenase, NAD binding domain D0871_15635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0871_15640 PF01316 Arginine repressor, DNA binding domain D0871_15640 PF02863 Arginine repressor, C-terminal domain D0871_15650 PF16868 NMT1-like family D0871_15670 PF00005 ABC transporter D0871_15675 PF00528 Binding-protein-dependent transport system inner membrane component D0871_15685 PF02441 Flavoprotein D0871_15690 PF01225 Mur ligase family, catalytic domain D0871_15690 PF02875 Mur ligase family, glutamate ligase domain D0871_15690 PF08245 Mur ligase middle domain D0871_15700 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0871_15705 PF00719 Inorganic pyrophosphatase D0871_15715 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0871_15720 PF04357 TamB, inner membrane protein subunit of TAM complex D0871_15725 PF01103 Surface antigen D0871_15725 PF17243 POTRA domain TamA domain 1 D0871_15730 PF01625 Peptide methionine sulfoxide reductase D0871_15735 PF06526 Protein of unknown function (DUF1107) D0871_15740 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0871_15745 PF10795 Protein of unknown function (DUF2607) D0871_15755 PF00005 ABC transporter D0871_15780 PF03600 Citrate transporter D0871_15780 PF02080 TrkA-C domain D0871_15790 PF00009 Elongation factor Tu GTP binding domain D0871_15795 PF01507 Phosphoadenosine phosphosulfate reductase family D0871_15800 PF14824 Sirohaem biosynthesis protein central D0871_15800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0871_15800 PF10414 Sirohaem synthase dimerisation region D0871_15805 PF02872 5'-nucleotidase, C-terminal domain D0871_15805 PF00149 Calcineurin-like phosphoesterase D0871_15815 PF00271 Helicase conserved C-terminal domain D0871_15815 PF03880 DbpA RNA binding domain D0871_15815 PF00270 DEAD/DEAH box helicase D0871_15820 PF13673 Acetyltransferase (GNAT) domain D0871_15830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_15830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0871_15840 PF01196 Ribosomal protein L17 D0871_15845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0871_15845 PF01000 RNA polymerase Rpb3/RpoA insert domain D0871_15845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0871_15850 PF00163 Ribosomal protein S4/S9 N-terminal domain D0871_15850 PF01479 S4 domain D0871_15855 PF00411 Ribosomal protein S11 D0871_15860 PF00416 Ribosomal protein S13/S18 D0871_15865 PF00444 Ribosomal protein L36 D0871_15870 PF00344 SecY translocase D0871_15875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0871_15880 PF00327 Ribosomal protein L30p/L7e D0871_15885 PF00333 Ribosomal protein S5, N-terminal domain D0871_15885 PF03719 Ribosomal protein S5, C-terminal domain D0871_15890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0871_15895 PF00347 Ribosomal protein L6 D0871_15900 PF00410 Ribosomal protein S8 D0871_15905 PF00253 Ribosomal protein S14p/S29e D0871_15910 PF00673 ribosomal L5P family C-terminus D0871_15910 PF00281 Ribosomal protein L5 D0871_15915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0871_15915 PF00467 KOW motif D0871_15920 PF00238 Ribosomal protein L14p/L23e D0871_15925 PF00366 Ribosomal protein S17 D0871_15930 PF00831 Ribosomal L29 protein D0871_15935 PF00252 Ribosomal protein L16p/L10e D0871_15940 PF07650 KH domain D0871_15940 PF00189 Ribosomal protein S3, C-terminal domain D0871_15945 PF00237 Ribosomal protein L22p/L17e D0871_15950 PF00203 Ribosomal protein S19 D0871_15955 PF03947 Ribosomal Proteins L2, C-terminal domain D0871_15955 PF00181 Ribosomal Proteins L2, RNA binding domain D0871_15960 PF00276 Ribosomal protein L23 D0871_15965 PF00573 Ribosomal protein L4/L1 family D0871_15970 PF00297 Ribosomal protein L3 D0871_15975 PF00338 Ribosomal protein S10p/S20e D0871_15980 PF01197 Ribosomal protein L31 D0871_15990 PF18074 Primosomal protein N C-terminal domain D0871_15990 PF17764 3′ DNA-binding domain (3′BD) D0871_15990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0871_15990 PF00271 Helicase conserved C-terminal domain D0871_15990 PF00270 DEAD/DEAH box helicase D0871_15995 PF00356 Bacterial regulatory proteins, lacI family D0871_16005 PF00227 Proteasome subunit D0871_16010 PF07724 AAA domain (Cdc48 subfamily) D0871_16010 PF00004 ATPase family associated with various cellular activities (AAA) D0871_16025 PF04002 RadC-like JAB domain D0871_16055 PF01040 UbiA prenyltransferase family D0871_16060 PF03737 Aldolase/RraA D0871_16065 PF06005 Cell division protein ZapB D0871_16075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0871_16080 PF00455 DeoR C terminal sensor domain D0871_16080 PF08220 DeoR-like helix-turn-helix domain D0871_16100 PF00121 Triosephosphate isomerase D0871_16105 PF10996 Beta-Casp domain D0871_16105 PF00753 Metallo-beta-lactamase superfamily D0871_16105 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D0871_16110 PF00483 Nucleotidyl transferase D0871_16115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0871_16115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0871_16115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0871_16120 PF02719 Polysaccharide biosynthesis protein D0871_16125 PF02397 Bacterial sugar transferase D0871_16130 PF01370 NAD dependent epimerase/dehydratase family D0871_16145 PF13439 Glycosyltransferase Family 4 D0871_16150 PF00535 Glycosyl transferase family 2 D0871_16165 PF00535 Glycosyl transferase family 2 D0871_16170 PF12464 Maltose acetyltransferase D0871_16170 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_16175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0871_16180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0871_16185 PF02719 Polysaccharide biosynthesis protein D0871_16185 PF08485 Polysaccharide biosynthesis protein C-terminal D0871_16230 PF06082 Exopolysaccharide biosynthesis protein YbjH D0871_16235 PF01370 NAD dependent epimerase/dehydratase family D0871_16240 PF03279 Bacterial lipid A biosynthesis acyltransferase D0871_16245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0871_16250 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0871_16260 PF13439 Glycosyltransferase Family 4 D0871_16260 PF00534 Glycosyl transferases group 1 D0871_16275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0871_16280 PF01575 MaoC like domain D0871_16285 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_16290 PF05523 WxcM-like, C-terminal D0871_16295 PF00483 Nucleotidyl transferase D0871_16300 PF16363 GDP-mannose 4,6 dehydratase D0871_16310 PF01219 Prokaryotic diacylglycerol kinase D0871_16315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0871_16320 PF00535 Glycosyl transferase family 2 D0871_16325 PF13439 Glycosyltransferase Family 4 D0871_16325 PF00534 Glycosyl transferases group 1 D0871_16330 PF01467 Cytidylyltransferase-like D0871_16335 PF05686 Glycosyl transferase family 90 D0871_16340 PF06827 Zinc finger found in FPG and IleRS D0871_16340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0871_16340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0871_16350 PF00471 Ribosomal protein L33 D0871_16355 PF00830 Ribosomal L28 family D0871_16360 PF04002 RadC-like JAB domain D0871_16365 PF17200 Single Cache domain 2 D0871_16365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_16365 PF00672 HAMP domain D0871_16375 PF04127 DNA / pantothenate metabolism flavoprotein D0871_16375 PF02441 Flavoprotein D0871_16380 PF00440 Bacterial regulatory proteins, tetR family D0871_16385 PF03279 Bacterial lipid A biosynthesis acyltransferase D0871_16390 PF00156 Phosphoribosyl transferase domain D0871_16395 PF03725 3' exoribonuclease family, domain 2 D0871_16395 PF01138 3' exoribonuclease family, domain 1 D0871_16400 PF03755 YicC-like family, N-terminal region D0871_16400 PF08340 Domain of unknown function (DUF1732) D0871_16410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_16410 PF00005 ABC transporter D0871_16415 PF00005 ABC transporter D0871_16415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_16420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_16425 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_16425 PF00528 Binding-protein-dependent transport system inner membrane component D0871_16430 PF00528 Binding-protein-dependent transport system inner membrane component D0871_16440 PF00593 TonB dependent receptor D0871_16440 PF07715 TonB-dependent Receptor Plug Domain D0871_16455 PF01618 MotA/TolQ/ExbB proton channel family D0871_16460 PF02472 Biopolymer transport protein ExbD/TolR D0871_16475 PF00625 Guanylate kinase D0871_16480 PF01192 RNA polymerase Rpb6 D0871_16485 PF02824 TGS domain D0871_16485 PF04607 Region found in RelA / SpoT proteins D0871_16485 PF13291 ACT domain D0871_16490 PF12105 SpoU, rRNA methylase, C-terminal D0871_16490 PF00588 SpoU rRNA Methylase family D0871_16495 PF17191 RecG wedge domain D0871_16495 PF00271 Helicase conserved C-terminal domain D0871_16495 PF00270 DEAD/DEAH box helicase D0871_16505 PF00860 Permease family D0871_16510 PF00672 HAMP domain D0871_16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_16510 PF00512 His Kinase A (phospho-acceptor) domain D0871_16515 PF00486 Transcriptional regulatory protein, C terminal D0871_16515 PF00072 Response regulator receiver domain D0871_16525 PF01272 Transcription elongation factor, GreA/GreB, C-term D0871_16525 PF03449 Transcription elongation factor, N-terminal D0871_16535 PF00575 S1 RNA binding domain D0871_16535 PF17674 HHH domain D0871_16535 PF09371 Tex-like protein N-terminal domain D0871_16535 PF16921 Tex protein YqgF-like domain D0871_16545 PF00561 alpha/beta hydrolase fold D0871_16550 PF00156 Phosphoribosyl transferase domain D0871_16555 PF01521 Iron-sulphur cluster biosynthesis D0871_16555 PF01106 NifU-like domain D0871_16560 PF00293 NUDIX domain D0871_16565 PF00459 Inositol monophosphatase family D0871_16570 PF01203 Type II secretion system (T2SS), protein N D0871_16575 PF04612 Type II secretion system (T2SS), protein M D0871_16580 PF12693 GspL periplasmic domain D0871_16580 PF05134 Type II secretion system (T2SS), protein L D0871_16585 PF03934 Type II secretion system (T2SS), protein K D0871_16590 PF07963 Prokaryotic N-terminal methylation motif D0871_16590 PF11612 Type II secretion system (T2SS), protein J D0871_16595 PF02501 Type II secretion system (T2SS), protein I D0871_16595 PF07963 Prokaryotic N-terminal methylation motif D0871_16600 PF12019 Type II transport protein GspH D0871_16605 PF07963 Prokaryotic N-terminal methylation motif D0871_16605 PF08334 Type II secretion system (T2SS), protein G D0871_16610 PF00482 Type II secretion system (T2SS), protein F D0871_16615 PF00437 Type II/IV secretion system protein D0871_16620 PF03958 Bacterial type II/III secretion system short domain D0871_16620 PF00263 Bacterial type II and III secretion system protein D0871_16625 PF11356 Type II secretion system protein C D0871_16630 PF01479 S4 domain D0871_16635 PF01430 Hsp33 protein D0871_16640 PF01293 Phosphoenolpyruvate carboxykinase D0871_16650 PF09500 Putative thioesterase (yiiD_Cterm) D0871_16650 PF00583 Acetyltransferase (GNAT) family D0871_16655 PF02580 D-Tyr-tRNA(Tyr) deacylase D0871_16660 PF03631 Virulence factor BrkB D0871_16680 PF03951 Glutamine synthetase, beta-Grasp domain D0871_16680 PF00120 Glutamine synthetase, catalytic domain D0871_16690 PF00989 PAS fold D0871_16690 PF00512 His Kinase A (phospho-acceptor) domain D0871_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_16695 PF00158 Sigma-54 interaction domain D0871_16695 PF00072 Response regulator receiver domain D0871_16695 PF02954 Bacterial regulatory protein, Fis family D0871_16700 PF00990 Diguanylate cyclase, GGDEF domain D0871_16700 PF00563 EAL domain D0871_16700 PF03707 Bacterial signalling protein N terminal repeat D0871_16705 PF00962 Adenosine/AMP deaminase D0871_16710 PF04055 Radical SAM superfamily D0871_16710 PF06969 HemN C-terminal domain D0871_16715 PF10675 Protein of unknown function (DUF2489) D0871_16720 PF04220 Der GTPase activator (YihI) D0871_16740 PF00034 Cytochrome c D0871_16745 PF01926 50S ribosome-binding GTPase D0871_16755 PF01612 3'-5' exonuclease D0871_16755 PF01367 5'-3' exonuclease, C-terminal SAM fold D0871_16755 PF00476 DNA polymerase family A D0871_16755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0871_16770 PF00490 Delta-aminolevulinic acid dehydratase D0871_16780 PF01026 TatD related DNase D0871_16790 PF00902 Sec-independent protein translocase protein (TatC) D0871_16795 PF02416 mttA/Hcf106 family D0871_16800 PF02416 mttA/Hcf106 family D0871_16805 PF03109 ABC1 family D0871_16810 PF02036 SCP-2 sterol transfer family D0871_16815 PF01209 ubiE/COQ5 methyltransferase family D0871_16820 PF02646 RmuC family D0871_16830 PF00563 EAL domain D0871_16830 PF00990 Diguanylate cyclase, GGDEF domain D0871_16830 PF03707 Bacterial signalling protein N terminal repeat D0871_16835 PF01594 AI-2E family transporter D0871_16885 PF04972 BON domain D0871_16890 PF01590 GAF domain D0871_16890 PF02954 Bacterial regulatory protein, Fis family D0871_16890 PF00158 Sigma-54 interaction domain D0871_16900 PF10625 Universal stress protein B (UspB) D0871_16905 PF00210 Ferritin-like domain D0871_16910 PF00582 Universal stress protein family D0871_16915 PF00892 EamA-like transporter family D0871_16925 PF04445 Putative SAM-dependent methyltransferase D0871_16930 PF00563 EAL domain D0871_16930 PF00990 Diguanylate cyclase, GGDEF domain D0871_16930 PF08448 PAS fold D0871_16935 PF01037 Lrp/AsnC ligand binding domain D0871_16940 PF01432 Peptidase family M3 D0871_16950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0871_16955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0871_16955 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_16980 PF00872 Transposase, Mutator family D0871_16985 PF00082 Subtilase family D0871_16990 PF00004 ATPase family associated with various cellular activities (AAA) D0871_17005 PF00962 Adenosine/AMP deaminase D0871_17010 PF01725 Ham1 family D0871_17035 PF00440 Bacterial regulatory proteins, tetR family D0871_17040 PF07690 Major Facilitator Superfamily D0871_17045 PF00440 Bacterial regulatory proteins, tetR family D0871_17045 PF02909 Tetracyclin repressor-like, C-terminal domain D0871_17065 PF03616 Sodium/glutamate symporter D0871_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17085 PF03466 LysR substrate binding domain D0871_17090 PF01048 Phosphorylase superfamily D0871_17095 PF01081 KDPG and KHG aldolase D0871_17100 PF02447 GntP family permease D0871_17105 PF01202 Shikimate kinase D0871_17110 PF00920 Dehydratase family D0871_17115 PF00893 Small Multidrug Resistance protein D0871_17120 PF00893 Small Multidrug Resistance protein D0871_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17125 PF03466 LysR substrate binding domain D0871_17130 PF00356 Bacterial regulatory proteins, lacI family D0871_17130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0871_17135 PF00069 Protein kinase domain D0871_17170 PF00528 Binding-protein-dependent transport system inner membrane component D0871_17170 PF12911 N-terminal TM domain of oligopeptide transport permease C D0871_17180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_17185 PF00005 ABC transporter D0871_17185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_17200 PF13419 Haloacid dehalogenase-like hydrolase D0871_17235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0871_17240 PF13361 UvrD-like helicase C-terminal domain D0871_17240 PF00580 UvrD/REP helicase N-terminal domain D0871_17245 PF00440 Bacterial regulatory proteins, tetR family D0871_17245 PF16295 Tetracyclin repressor-like, C-terminal domain D0871_17250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_17255 PF00873 AcrB/AcrD/AcrF family D0871_17265 PF04380 Membrane fusogenic activity D0871_17270 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0871_17270 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0871_17275 PF03466 LysR substrate binding domain D0871_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17320 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_17325 PF07369 Protein of unknown function (DUF1488) D0871_17330 PF08501 Shikimate dehydrogenase substrate binding domain D0871_17330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0871_17330 PF01488 Shikimate / quinate 5-dehydrogenase D0871_17335 PF01218 Coproporphyrinogen III oxidase D0871_17340 PF01300 Telomere recombination D0871_17345 PF00731 AIR carboxylase D0871_17350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0871_17350 PF02222 ATP-grasp domain D0871_17355 PF01396 Topoisomerase DNA binding C4 zinc finger D0871_17360 PF04361 Protein of unknown function (DUF494) D0871_17365 PF02481 DNA recombination-mediator protein A D0871_17365 PF17782 DprA winged helix domain D0871_17375 PF01327 Polypeptide deformylase D0871_17380 PF00551 Formyl transferase D0871_17380 PF02911 Formyl transferase, C-terminal domain D0871_17385 PF01029 NusB family D0871_17385 PF01189 16S rRNA methyltransferase RsmB/F D0871_17390 PF02254 TrkA-N domain D0871_17390 PF02080 TrkA-C domain D0871_17395 PF02386 Cation transport protein D0871_17405 PF03006 Haemolysin-III related D0871_17410 PF07070 SpoOM protein D0871_17420 PF06288 Protein of unknown function (DUF1040) D0871_17425 PF12801 4Fe-4S binding domain D0871_17425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D0871_17425 PF13746 4Fe-4S dicluster domain D0871_17430 PF01636 Phosphotransferase enzyme family D0871_17435 PF01323 DSBA-like thioredoxin domain D0871_17440 PF01553 Acyltransferase D0871_17500 PF01078 Magnesium chelatase, subunit ChlI D0871_17500 PF13335 Magnesium chelatase, subunit ChlI C-terminal D0871_17505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0871_17505 PF00205 Thiamine pyrophosphate enzyme, central domain D0871_17505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0871_17515 PF01063 Amino-transferase class IV D0871_17520 PF00920 Dehydratase family D0871_17525 PF00585 C-terminal regulatory domain of Threonine dehydratase D0871_17525 PF00291 Pyridoxal-phosphate dependent enzyme D0871_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17530 PF03466 LysR substrate binding domain D0871_17535 PF07690 Major Facilitator Superfamily D0871_17540 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_17545 PF00528 Binding-protein-dependent transport system inner membrane component D0871_17550 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_17550 PF12804 MobA-like NTP transferase domain D0871_17555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0871_17555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0871_17560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_17560 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0871_17565 PF00231 ATP synthase D0871_17570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_17570 PF00306 ATP synthase alpha/beta chain, C terminal domain D0871_17570 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0871_17575 PF00213 ATP synthase delta (OSCP) subunit D0871_17580 PF00430 ATP synthase B/B' CF(0) D0871_17585 PF00137 ATP synthase subunit C D0871_17590 PF00119 ATP synthase A chain D0871_17595 PF03899 ATP synthase I chain D0871_17600 PF02195 ParB-like nuclease domain D0871_17600 PF17762 HTH domain found in ParB protein D0871_17605 PF13614 AAA domain D0871_17610 PF02527 rRNA small subunit methyltransferase G D0871_17615 PF13932 GidA associated domain D0871_17615 PF01134 Glucose inhibited division protein A D0871_17620 PF00258 Flavodoxin D0871_17625 PF12631 MnmE helical domain D0871_17625 PF10396 GTP-binding protein TrmE N-terminus D0871_17625 PF01926 50S ribosome-binding GTPase D0871_17630 PF02096 60Kd inner membrane protein D0871_17630 PF14849 YidC periplasmic domain D0871_17635 PF01809 Putative membrane protein insertion efficiency factor D0871_17640 PF00825 Ribonuclease P D0871_17645 PF00468 Ribosomal protein L34 D0871_17650 PF00005 ABC transporter D0871_17655 PF00528 Binding-protein-dependent transport system inner membrane component D0871_17660 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_17690 PF01820 D-ala D-ala ligase N-terminus D0871_17690 PF07478 D-ala D-ala ligase C-terminus D0871_17700 PF01253 Translation initiation factor SUI1 D0871_17750 PF05707 Zonular occludens toxin (Zot) D0871_17785 PF03466 LysR substrate binding domain D0871_17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17795 PF00582 Universal stress protein family D0871_17800 PF03701 Uncharacterised protein family (UPF0181) D0871_17815 PF00072 Response regulator receiver domain D0871_17815 PF00486 Transcriptional regulatory protein, C terminal D0871_17825 PF02233 NAD(P) transhydrogenase beta subunit D0871_17830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0871_17830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0871_17830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0871_17845 PF00072 Response regulator receiver domain D0871_17845 PF00990 Diguanylate cyclase, GGDEF domain D0871_17855 PF00360 Phytochrome region D0871_17855 PF00563 EAL domain D0871_17855 PF00990 Diguanylate cyclase, GGDEF domain D0871_17855 PF01590 GAF domain D0871_17865 PF00005 ABC transporter D0871_17865 PF03459 TOBE domain D0871_17870 PF00528 Binding-protein-dependent transport system inner membrane component D0871_17880 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0871_17885 PF04076 Bacterial OB fold (BOF) protein D0871_17895 PF18030 RimK PreATP-grasp domain D0871_17895 PF08443 RimK-like ATP-grasp domain D0871_17900 PF00155 Aminotransferase class I and II D0871_17905 PF12833 Helix-turn-helix domain D0871_17915 PF01554 MatE D0871_17925 PF03477 ATP cone domain D0871_17925 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0871_17935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_17940 PF00873 AcrB/AcrD/AcrF family D0871_17950 PF04143 Sulphur transport D0871_17965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0871_17965 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_17970 PF00384 Molybdopterin oxidoreductase D0871_17980 PF03466 LysR substrate binding domain D0871_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_17985 PF02634 FdhD/NarQ family D0871_17990 PF07690 Major Facilitator Superfamily D0871_17995 PF00196 Bacterial regulatory proteins, luxR family D0871_17995 PF00072 Response regulator receiver domain D0871_18000 PF05231 MASE1 D0871_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_18000 PF07730 Histidine kinase D0871_18005 PF07690 Major Facilitator Superfamily D0871_18010 PF01238 Phosphomannose isomerase type I D0871_18030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0871_18030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0871_18035 PF00085 Thioredoxin D0871_18040 PF07690 Major Facilitator Superfamily D0871_18050 PF01554 MatE D0871_18055 PF11756 Nitrous oxide-stimulated promoter D0871_18070 PF00593 TonB dependent receptor D0871_18070 PF07715 TonB-dependent Receptor Plug Domain D0871_18085 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0871_18100 PF14824 Sirohaem biosynthesis protein central D0871_18100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0871_18100 PF10414 Sirohaem synthase dimerisation region D0871_18105 PF01226 Formate/nitrite transporter D0871_18110 PF13806 Rieske-like [2Fe-2S] domain D0871_18115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0871_18115 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_18115 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0871_18115 PF04324 BFD-like [2Fe-2S] binding domain D0871_18115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0871_18120 PF14760 Rnk N-terminus D0871_18120 PF01272 Transcription elongation factor, GreA/GreB, C-term D0871_18130 PF00990 Diguanylate cyclase, GGDEF domain D0871_18130 PF03707 Bacterial signalling protein N terminal repeat D0871_18130 PF00563 EAL domain D0871_18140 PF03707 Bacterial signalling protein N terminal repeat D0871_18140 PF00990 Diguanylate cyclase, GGDEF domain D0871_18140 PF00563 EAL domain D0871_18185 PF00128 Alpha amylase, catalytic domain D0871_18185 PF09154 Domain of unknown function (DUF1939) D0871_18200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_18200 PF00672 HAMP domain D0871_18205 PF01168 Alanine racemase, N-terminal domain D0871_18205 PF00842 Alanine racemase, C-terminal domain D0871_18225 PF01565 FAD binding domain D0871_18225 PF09330 D-lactate dehydrogenase, membrane binding D0871_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_18230 PF03466 LysR substrate binding domain D0871_18250 PF05762 VWA domain containing CoxE-like protein D0871_18255 PF12592 Protein of unknown function (DUF3763) D0871_18255 PF17868 AAA lid domain D0871_18255 PF07728 AAA domain (dynein-related subfamily) D0871_18265 PF01212 Beta-eliminating lyase D0871_18270 PF00034 Cytochrome c D0871_18280 PF03606 C4-dicarboxylate anaerobic carrier D0871_18290 PF07690 Major Facilitator Superfamily D0871_18300 PF08212 Lipocalin-like domain D0871_18320 PF13476 AAA domain D0871_18325 PF12320 Type 5 capsule protein repressor C-terminal domain D0871_18325 PF00149 Calcineurin-like phosphoesterase D0871_18340 PF04717 Type VI secretion system, phage-baseplate injector D0871_18340 PF16671 Actin cross-linking domain D0871_18350 PF07724 AAA domain (Cdc48 subfamily) D0871_18350 PF17871 AAA lid domain D0871_18350 PF00004 ATPase family associated with various cellular activities (AAA) D0871_18350 PF10431 C-terminal, D2-small domain, of ClpB protein D0871_18410 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0871_18410 PF00691 OmpA family D0871_18430 PF00069 Protein kinase domain D0871_18430 PF03793 PASTA domain D0871_18455 PF00211 Adenylate and Guanylate cyclase catalytic domain D0871_18455 PF00072 Response regulator receiver domain D0871_18470 PF08361 MAATS-type transcriptional repressor, C-terminal region D0871_18470 PF00440 Bacterial regulatory proteins, tetR family D0871_18485 PF04324 BFD-like [2Fe-2S] binding domain D0871_18485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0871_18485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0871_18485 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_18485 PF13806 Rieske-like [2Fe-2S] domain D0871_18485 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0871_18490 PF00005 ABC transporter D0871_18510 PF08376 Nitrate and nitrite sensing D0871_18510 PF03861 ANTAR domain D0871_18515 PF01738 Dienelactone hydrolase family D0871_18525 PF00591 Glycosyl transferase family, a/b domain D0871_18525 PF02885 Glycosyl transferase family, helical bundle domain D0871_18530 PF10414 Sirohaem synthase dimerisation region D0871_18530 PF14824 Sirohaem biosynthesis protein central D0871_18530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0871_18535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_18535 PF00384 Molybdopterin oxidoreductase D0871_18535 PF01568 Molydopterin dinucleotide binding domain D0871_18540 PF00583 Acetyltransferase (GNAT) family D0871_18545 PF03222 Tryptophan/tyrosine permease family D0871_18555 PF00990 Diguanylate cyclase, GGDEF domain D0871_18555 PF00072 Response regulator receiver domain D0871_18565 PF00082 Subtilase family D0871_18565 PF01483 Proprotein convertase P-domain D0871_18575 PF00245 Alkaline phosphatase D0871_18590 PF00072 Response regulator receiver domain D0871_18590 PF00486 Transcriptional regulatory protein, C terminal D0871_18610 PF01048 Phosphorylase superfamily D0871_18615 PF04973 Nicotinamide mononucleotide transporter D0871_18625 PF00356 Bacterial regulatory proteins, lacI family D0871_18630 PF00294 pfkB family carbohydrate kinase D0871_18635 PF13407 Periplasmic binding protein domain D0871_18640 PF02653 Branched-chain amino acid transport system / permease component D0871_18645 PF00005 ABC transporter D0871_18650 PF05025 RbsD / FucU transport protein family D0871_18655 PF00563 EAL domain D0871_18655 PF00990 Diguanylate cyclase, GGDEF domain D0871_18660 PF01048 Phosphorylase superfamily D0871_18705 PF04116 Fatty acid hydroxylase superfamily D0871_18720 PF00072 Response regulator receiver domain D0871_18720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_18720 PF00512 His Kinase A (phospho-acceptor) domain D0871_18720 PF09308 LuxQ, periplasmic D0871_18725 PF03150 Di-haem cytochrome c peroxidase D0871_18725 PF00034 Cytochrome c D0871_18740 PF03707 Bacterial signalling protein N terminal repeat D0871_18740 PF00563 EAL domain D0871_18740 PF00990 Diguanylate cyclase, GGDEF domain D0871_18740 PF13188 PAS domain D0871_18750 PF01145 SPFH domain / Band 7 family D0871_18750 PF16200 C-terminal region of band_7 D0871_18760 PF00881 Nitroreductase family D0871_18765 PF00571 CBS domain D0871_18765 PF00005 ABC transporter D0871_18770 PF00528 Binding-protein-dependent transport system inner membrane component D0871_18775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0871_18780 PF05199 GMC oxidoreductase D0871_18780 PF00732 GMC oxidoreductase D0871_18785 PF00171 Aldehyde dehydrogenase family D0871_18790 PF00440 Bacterial regulatory proteins, tetR family D0871_18790 PF13977 BetI-type transcriptional repressor, C-terminal D0871_18795 PF00990 Diguanylate cyclase, GGDEF domain D0871_18795 PF17151 Periplasmic sensor domain D0871_18810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0871_18810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0871_18820 PF00378 Enoyl-CoA hydratase/isomerase D0871_18825 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_18825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_18825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_18830 PF00171 Aldehyde dehydrogenase family D0871_18835 PF00108 Thiolase, N-terminal domain D0871_18835 PF02803 Thiolase, C-terminal domain D0871_18840 PF09278 MerR, DNA binding D0871_18840 PF00376 MerR family regulatory protein D0871_18845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_18845 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_18845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_18850 PF01039 Carboxyl transferase domain D0871_18855 PF00378 Enoyl-CoA hydratase/isomerase D0871_18860 PF00364 Biotin-requiring enzyme D0871_18860 PF00289 Biotin carboxylase, N-terminal domain D0871_18860 PF02785 Biotin carboxylase C-terminal domain D0871_18860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0871_18865 PF00682 HMGL-like D0871_18870 PF00672 HAMP domain D0871_18870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0871_18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_18870 PF00512 His Kinase A (phospho-acceptor) domain D0871_18870 PF00072 Response regulator receiver domain D0871_18870 PF01627 Hpt domain D0871_18885 PF12795 Mechanosensitive ion channel porin domain D0871_18885 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0871_18885 PF00924 Mechanosensitive ion channel D0871_18895 PF12464 Maltose acetyltransferase D0871_18895 PF14602 Hexapeptide repeat of succinyl-transferase D0871_18900 PF00392 Bacterial regulatory proteins, gntR family D0871_18900 PF00155 Aminotransferase class I and II D0871_18905 PF01654 Cytochrome bd terminal oxidase subunit I D0871_18910 PF02322 Cytochrome bd terminal oxidase subunit II D0871_18920 PF02567 Phenazine biosynthesis-like protein D0871_18925 PF02627 Carboxymuconolactone decarboxylase family D0871_18930 PF13411 MerR HTH family regulatory protein D0871_18940 PF00034 Cytochrome c D0871_18950 PF05724 Thiopurine S-methyltransferase (TPMT) D0871_18955 PF00501 AMP-binding enzyme D0871_18955 PF14535 AMP-binding enzyme C-terminal domain D0871_18960 PF00005 ABC transporter D0871_18985 PF00005 ABC transporter D0871_18985 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0871_19000 PF01012 Electron transfer flavoprotein domain D0871_19005 PF00766 Electron transfer flavoprotein FAD-binding domain D0871_19005 PF01012 Electron transfer flavoprotein domain D0871_19010 PF13193 AMP-binding enzyme C-terminal domain D0871_19010 PF00501 AMP-binding enzyme D0871_19015 PF00478 IMP dehydrogenase / GMP reductase domain D0871_19020 PF03853 YjeF-related protein N-terminus D0871_19020 PF01256 Carbohydrate kinase D0871_19030 PF00072 Response regulator receiver domain D0871_19035 PF00248 Aldo/keto reductase family D0871_19050 PF00654 Voltage gated chloride channel D0871_19060 PF01566 Natural resistance-associated macrophage protein D0871_19065 PF01227 GTP cyclohydrolase I D0871_19070 PF03454 MoeA C-terminal region (domain IV) D0871_19070 PF03453 MoeA N-terminal region (domain I and II) D0871_19070 PF00994 Probable molybdopterin binding domain D0871_19075 PF00899 ThiF family D0871_19095 PF00581 Rhodanese-like domain D0871_19100 PF00990 Diguanylate cyclase, GGDEF domain D0871_19100 PF00563 EAL domain D0871_19100 PF03707 Bacterial signalling protein N terminal repeat D0871_19105 PF00704 Glycosyl hydrolases family 18 D0871_19105 PF08329 Chitinase A, N-terminal domain D0871_19125 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0871_19130 PF02780 Transketolase, C-terminal domain D0871_19130 PF02779 Transketolase, pyrimidine binding domain D0871_19130 PF00456 Transketolase, thiamine diphosphate binding domain D0871_19135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_19135 PF08447 PAS fold D0871_19145 PF07690 Major Facilitator Superfamily D0871_19150 PF00793 DAHP synthetase I family D0871_19160 PF01389 OmpA-like transmembrane domain D0871_19160 PF00691 OmpA family D0871_19165 PF13419 Haloacid dehalogenase-like hydrolase D0871_19170 PF00472 RF-1 domain D0871_19175 PF12729 Four helix bundle sensory module for signal transduction D0871_19175 PF00672 HAMP domain D0871_19175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_19180 PF00873 AcrB/AcrD/AcrF family D0871_19185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_19190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0871_19195 PF01546 Peptidase family M20/M25/M40 D0871_19195 PF07687 Peptidase dimerisation domain D0871_19210 PF00196 Bacterial regulatory proteins, luxR family D0871_19210 PF00072 Response regulator receiver domain D0871_19215 PF00672 HAMP domain D0871_19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_19215 PF07730 Histidine kinase D0871_19215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0871_19220 PF12838 4Fe-4S dicluster domain D0871_19220 PF13187 4Fe-4S dicluster domain D0871_19230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_19230 PF01568 Molydopterin dinucleotide binding domain D0871_19230 PF00384 Molybdopterin oxidoreductase D0871_19235 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D0871_19240 PF03264 NapC/NirT cytochrome c family, N-terminal region D0871_19250 PF00561 alpha/beta hydrolase fold D0871_19250 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D0871_19260 PF00108 Thiolase, N-terminal domain D0871_19260 PF02803 Thiolase, C-terminal domain D0871_19265 PF00106 short chain dehydrogenase D0871_19280 PF02355 Protein export membrane protein D0871_19280 PF07549 SecD/SecF GG Motif D0871_19285 PF02355 Protein export membrane protein D0871_19285 PF13721 SecD export protein N-terminal TM region D0871_19285 PF07549 SecD/SecF GG Motif D0871_19315 PF01037 Lrp/AsnC ligand binding domain D0871_19335 PF00529 HlyD membrane-fusion protein of T1SS D0871_19335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_19345 PF00072 Response regulator receiver domain D0871_19345 PF09308 LuxQ, periplasmic D0871_19345 PF00512 His Kinase A (phospho-acceptor) domain D0871_19350 PF13407 Periplasmic binding protein domain D0871_19355 PF01541 GIY-YIG catalytic domain D0871_19360 PF04337 Protein of unknown function, DUF480 D0871_19375 PF04363 Protein of unknown function (DUF496) D0871_19380 PF01554 MatE D0871_19385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0871_19390 PF01627 Hpt domain D0871_19390 PF00512 His Kinase A (phospho-acceptor) domain D0871_19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_19390 PF00672 HAMP domain D0871_19390 PF00072 Response regulator receiver domain D0871_19390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0871_19395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0871_19395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0871_19410 PF03466 LysR substrate binding domain D0871_19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_19415 PF13404 AsnC-type helix-turn-helix domain D0871_19415 PF01037 Lrp/AsnC ligand binding domain D0871_19425 PF13520 Amino acid permease D0871_19430 PF00155 Aminotransferase class I and II D0871_19430 PF00392 Bacterial regulatory proteins, gntR family D0871_19440 PF03109 ABC1 family D0871_19445 PF01769 Divalent cation transporter D0871_19445 PF00571 CBS domain D0871_19445 PF03448 MgtE intracellular N domain D0871_19450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0871_19455 PF07969 Amidohydrolase family D0871_19465 PF01966 HD domain D0871_19480 PF07690 Major Facilitator Superfamily D0871_19490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0871_19495 PF00255 Glutathione peroxidase D0871_19510 PF01323 DSBA-like thioredoxin domain D0871_19530 PF00106 short chain dehydrogenase D0871_19535 PF00486 Transcriptional regulatory protein, C terminal D0871_19535 PF00072 Response regulator receiver domain D0871_19540 PF00672 HAMP domain D0871_19540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_19540 PF00512 His Kinase A (phospho-acceptor) domain D0871_19550 PF01219 Prokaryotic diacylglycerol kinase D0871_19555 PF08019 Phosphoethanolamine transferase EptA/EptB D0871_19555 PF00884 Sulfatase D0871_19560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0871_19570 PF07690 Major Facilitator Superfamily D0871_19585 PF01047 MarR family D0871_19595 PF01734 Patatin-like phospholipase D0871_19600 PF02678 Pirin D0871_19600 PF05726 Pirin C-terminal cupin domain D0871_19605 PF00313 'Cold-shock' DNA-binding domain D0871_19625 PF00962 Adenosine/AMP deaminase D0871_19630 PF00462 Glutaredoxin D0871_19630 PF08534 Redoxin D0871_19645 PF07943 Penicillin-binding protein 5, C-terminal domain D0871_19645 PF00768 D-alanyl-D-alanine carboxypeptidase D0871_19660 PF02798 Glutathione S-transferase, N-terminal domain D0871_19665 PF00440 Bacterial regulatory proteins, tetR family D0871_19665 PF02909 Tetracyclin repressor-like, C-terminal domain D0871_19670 PF01872 RibD C-terminal domain D0871_19725 PF00528 Binding-protein-dependent transport system inner membrane component D0871_19730 PF00528 Binding-protein-dependent transport system inner membrane component D0871_19730 PF14785 Maltose transport system permease protein MalF P2 domain D0871_19735 PF01547 Bacterial extracellular solute-binding protein D0871_19740 PF00005 ABC transporter D0871_19740 PF08402 TOBE domain D0871_19745 PF02397 Bacterial sugar transferase D0871_19760 PF02706 Chain length determinant protein D0871_19760 PF13807 G-rich domain on putative tyrosine kinase D0871_19760 PF13614 AAA domain D0871_19770 PF13439 Glycosyltransferase Family 4 D0871_19770 PF00534 Glycosyl transferases group 1 D0871_19805 PF16925 Tetracyclin repressor-like, C-terminal domain D0871_19805 PF00440 Bacterial regulatory proteins, tetR family D0871_19810 PF16884 N-terminal domain of oxidoreductase D0871_19810 PF00107 Zinc-binding dehydrogenase D0871_19815 PF13417 Glutathione S-transferase, N-terminal domain D0871_19820 PF06628 Catalase-related immune-responsive D0871_19820 PF00199 Catalase D0871_19825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0871_19825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0871_19835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_19845 PF12833 Helix-turn-helix domain D0871_19850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_19850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_19855 PF01238 Phosphomannose isomerase type I D0871_19865 PF13419 Haloacid dehalogenase-like hydrolase D0871_19870 PF00127 Copper binding proteins, plastocyanin/azurin family D0871_19875 PF00563 EAL domain D0871_19875 PF00990 Diguanylate cyclase, GGDEF domain D0871_19875 PF03707 Bacterial signalling protein N terminal repeat D0871_19880 PF02386 Cation transport protein D0871_19885 PF02080 TrkA-C domain D0871_19885 PF02254 TrkA-N domain D0871_19890 PF00072 Response regulator receiver domain D0871_19890 PF00486 Transcriptional regulatory protein, C terminal D0871_19895 PF16736 Single Cache-like D0871_19895 PF00989 PAS fold D0871_19895 PF00512 His Kinase A (phospho-acceptor) domain D0871_19895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_19900 PF00664 ABC transporter transmembrane region D0871_19900 PF00005 ABC transporter D0871_19905 PF07715 TonB-dependent Receptor Plug Domain D0871_19905 PF00593 TonB dependent receptor D0871_19910 PF00005 ABC transporter D0871_19915 PF01497 Periplasmic binding protein D0871_19920 PF01032 FecCD transport family D0871_19930 PF00691 OmpA family D0871_19945 PF00529 HlyD membrane-fusion protein of T1SS D0871_19950 PF00005 ABC transporter D0871_19950 PF00664 ABC transporter transmembrane region D0871_19960 PF00196 Bacterial regulatory proteins, luxR family D0871_19965 PF00196 Bacterial regulatory proteins, luxR family D0871_19975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_19975 PF00672 HAMP domain D0871_19975 PF02743 Cache domain D0871_19985 PF17863 AAA lid domain D0871_19985 PF07726 ATPase family associated with various cellular activities (AAA) D0871_19990 PF01882 Protein of unknown function DUF58 D0871_20000 PF13519 von Willebrand factor type A domain D0871_20005 PF07584 Aerotolerance regulator N-terminal D0871_20005 PF13519 von Willebrand factor type A domain D0871_20020 PF00005 ABC transporter D0871_20025 PF00528 Binding-protein-dependent transport system inner membrane component D0871_20030 PF00528 Binding-protein-dependent transport system inner membrane component D0871_20035 PF12849 PBP superfamily domain D0871_20040 PF00672 HAMP domain D0871_20040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_20060 PF07715 TonB-dependent Receptor Plug Domain D0871_20060 PF00593 TonB dependent receptor D0871_20065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0871_20065 PF00326 Prolyl oligopeptidase family D0871_20070 PF00270 DEAD/DEAH box helicase D0871_20070 PF00271 Helicase conserved C-terminal domain D0871_20080 PF03734 L,D-transpeptidase catalytic domain D0871_20080 PF01476 LysM domain D0871_20080 PF17969 L,D-transpeptidase C-terminal domain D0871_20085 PF03441 FAD binding domain of DNA photolyase D0871_20085 PF00875 DNA photolyase D0871_20090 PF13411 MerR HTH family regulatory protein D0871_20095 PF08349 Protein of unknown function (DUF1722) D0871_20105 PF01048 Phosphorylase superfamily D0871_20120 PF00990 Diguanylate cyclase, GGDEF domain D0871_20125 PF11742 Protein of unknown function (DUF3302) D0871_20130 PF00529 HlyD membrane-fusion protein of T1SS D0871_20130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_20135 PF07155 ECF-type riboflavin transporter, S component D0871_20140 PF12558 ATP-binding cassette cobalt transporter D0871_20140 PF00005 ABC transporter D0871_20155 PF12801 4Fe-4S binding domain D0871_20155 PF13237 4Fe-4S dicluster domain D0871_20160 PF12800 4Fe-4S binding domain D0871_20160 PF12838 4Fe-4S dicluster domain D0871_20165 PF00583 Acetyltransferase (GNAT) family D0871_20185 PF07238 PilZ domain D0871_20185 PF12945 Flagellar protein YcgR D0871_20190 PF00672 HAMP domain D0871_20190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_20195 PF13654 AAA domain D0871_20195 PF05362 Lon protease (S16) C-terminal proteolytic domain D0871_20205 PF00005 ABC transporter D0871_20205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_20210 PF00326 Prolyl oligopeptidase family D0871_20210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0871_20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20215 PF03466 LysR substrate binding domain D0871_20220 PF02652 L-lactate permease D0871_20225 PF01070 FMN-dependent dehydrogenase D0871_20235 PF00924 Mechanosensitive ion channel D0871_20240 PF00194 Eukaryotic-type carbonic anhydrase D0871_20270 PF00107 Zinc-binding dehydrogenase D0871_20270 PF08240 Alcohol dehydrogenase GroES-like domain D0871_20275 PF00155 Aminotransferase class I and II D0871_20280 PF03707 Bacterial signalling protein N terminal repeat D0871_20280 PF00990 Diguanylate cyclase, GGDEF domain D0871_20280 PF00563 EAL domain D0871_20285 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_20290 PF00266 Aminotransferase class-V D0871_20295 PF00080 Copper/zinc superoxide dismutase (SODC) D0871_20300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_20300 PF08448 PAS fold D0871_20300 PF13426 PAS domain D0871_20300 PF00072 Response regulator receiver domain D0871_20300 PF00512 His Kinase A (phospho-acceptor) domain D0871_20305 PF00072 Response regulator receiver domain D0871_20305 PF00486 Transcriptional regulatory protein, C terminal D0871_20335 PF03466 LysR substrate binding domain D0871_20335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_20375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20375 PF03466 LysR substrate binding domain D0871_20390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0871_20390 PF18269 T3SS EscN ATPase C-terminal domain D0871_20400 PF14841 FliG middle domain D0871_20400 PF14842 FliG N-terminal domain D0871_20400 PF01706 FliG C-terminal domain D0871_20405 PF08345 Flagellar M-ring protein C-terminal D0871_20405 PF01514 Secretory protein of YscJ/FliF family D0871_20410 PF02049 Flagellar hook-basal body complex protein FliE D0871_20415 PF00158 Sigma-54 interaction domain D0871_20415 PF00072 Response regulator receiver domain D0871_20415 PF02954 Bacterial regulatory protein, Fis family D0871_20430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0871_20435 PF00813 FliP family D0871_20440 PF01313 Bacterial export proteins, family 3 D0871_20445 PF01311 Bacterial export proteins, family 1 D0871_20450 PF01312 FlhB HrpN YscU SpaS Family D0871_20455 PF00771 FHIPEP family D0871_20465 PF00669 Bacterial flagellin N-terminal helical region D0871_20465 PF00700 Bacterial flagellin C-terminal helical region D0871_20475 PF02465 Flagellar hook-associated protein 2 N-terminus D0871_20475 PF07196 Flagellin hook IN motif D0871_20475 PF07195 Flagellar hook-associated protein 2 C-terminus D0871_20480 PF02561 Flagellar protein FliS D0871_20495 PF03748 Flagellar basal body-associated protein FliL D0871_20500 PF04542 Sigma-70 region 2 D0871_20500 PF04545 Sigma-70, region 4 D0871_20505 PF01618 MotA/TolQ/ExbB proton channel family D0871_20510 PF00691 OmpA family D0871_20510 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0871_20520 PF08000 Bacterial PH domain D0871_20565 PF04055 Radical SAM superfamily D0871_20570 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0871_20580 PF00583 Acetyltransferase (GNAT) family D0871_20595 PF07690 Major Facilitator Superfamily D0871_20600 PF03466 LysR substrate binding domain D0871_20600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20605 PF00892 EamA-like transporter family D0871_20630 PF13533 Biotin-lipoyl like D0871_20640 PF01594 AI-2E family transporter D0871_20645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0871_20655 PF00175 Oxidoreductase NAD-binding domain D0871_20655 PF00970 Oxidoreductase FAD-binding domain D0871_20665 PF09905 DNA-binding protein VF530 D0871_20670 PF03466 LysR substrate binding domain D0871_20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20680 PF00881 Nitroreductase family D0871_20685 PF12833 Helix-turn-helix domain D0871_20685 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0871_20690 PF00128 Alpha amylase, catalytic domain D0871_20690 PF00686 Starch binding domain D0871_20695 PF00768 D-alanyl-D-alanine carboxypeptidase D0871_20695 PF07943 Penicillin-binding protein 5, C-terminal domain D0871_20700 PF00561 alpha/beta hydrolase fold D0871_20715 PF18416 N-acetylglucosamine binding protein domain 2 D0871_20715 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0871_20720 PF01734 Patatin-like phospholipase D0871_20725 PF01914 MarC family integral membrane protein D0871_20730 PF00881 Nitroreductase family D0871_20735 PF02563 Polysaccharide biosynthesis/export protein D0871_20735 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0871_20735 PF10531 SLBB domain D0871_20740 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0871_20745 PF13614 AAA domain D0871_20745 PF13807 G-rich domain on putative tyrosine kinase D0871_20745 PF02706 Chain length determinant protein D0871_20755 PF08803 Putative mono-oxygenase ydhR D0871_20760 PF03466 LysR substrate binding domain D0871_20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_20770 PF00375 Sodium:dicarboxylate symporter family D0871_20775 PF06803 Protein of unknown function (DUF1232) D0871_20780 PF01546 Peptidase family M20/M25/M40 D0871_20780 PF07687 Peptidase dimerisation domain D0871_20785 PF07670 Nucleoside recognition D0871_20790 PF07670 Nucleoside recognition D0871_20805 PF00128 Alpha amylase, catalytic domain D0871_20810 PF00912 Transglycosylase D0871_20815 PF02806 Alpha amylase, C-terminal all-beta domain D0871_20815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0871_20815 PF00128 Alpha amylase, catalytic domain D0871_20820 PF02446 4-alpha-glucanotransferase D0871_20825 PF00343 Carbohydrate phosphorylase D0871_20840 PF00196 Bacterial regulatory proteins, luxR family D0871_20840 PF17874 MalT-like TPR region D0871_20855 PF02630 SCO1/SenC D0871_20865 PF00367 phosphotransferase system, EIIB D0871_20865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0871_20865 PF02378 Phosphotransferase system, EIIC D0871_20870 PF03193 RsgA GTPase D0871_20875 PF00375 Sodium:dicarboxylate symporter family D0871_20885 PF08543 Phosphomethylpyrimidine kinase D0871_20895 PF13520 Amino acid permease D0871_20900 PF01276 Orn/Lys/Arg decarboxylase, major domain D0871_20900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0871_20900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0871_20915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0871_20915 PF11852 Domain of unknown function (DUF3372) D0871_20915 PF03714 Bacterial pullanase-associated domain D0871_20915 PF18494 Pullulanase Ins domain D0871_20915 PF17967 Pullulanase N2 domain D0871_20920 PF04231 Endonuclease I D0871_20930 PF00128 Alpha amylase, catalytic domain D0871_20930 PF02903 Alpha amylase, N-terminal ig-like domain D0871_20945 PF02264 LamB porin D0871_20950 PF00128 Alpha amylase, catalytic domain D0871_20950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0871_20960 PF07690 Major Facilitator Superfamily D0871_20970 PF04225 Opacity-associated protein A LysM-like domain D0871_20970 PF01551 Peptidase family M23 D0871_20980 PF00675 Insulinase (Peptidase family M16) D0871_20980 PF05193 Peptidase M16 inactive domain D0871_20985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_20985 PF17200 Single Cache domain 2 D0871_20985 PF00672 HAMP domain D0871_20990 PF00005 ABC transporter D0871_20995 PF01032 FecCD transport family D0871_21000 PF01032 FecCD transport family D0871_21005 PF01497 Periplasmic binding protein D0871_21010 PF00593 TonB dependent receptor D0871_21010 PF07660 Secretin and TonB N terminus short domain D0871_21010 PF07715 TonB-dependent Receptor Plug Domain D0871_21015 PF07715 TonB-dependent Receptor Plug Domain D0871_21015 PF00593 TonB dependent receptor D0871_21020 PF02655 ATP-grasp domain D0871_21020 PF00206 Lyase D0871_21025 PF06276 Ferric iron reductase FhuF-like transporter D0871_21025 PF04183 IucA / IucC family D0871_21035 PF06276 Ferric iron reductase FhuF-like transporter D0871_21035 PF04183 IucA / IucC family D0871_21040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0871_21040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0871_21045 PF01547 Bacterial extracellular solute-binding protein D0871_21050 PF08521 Two-component sensor kinase N-terminal D0871_21050 PF00512 His Kinase A (phospho-acceptor) domain D0871_21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_21055 PF00486 Transcriptional regulatory protein, C terminal D0871_21055 PF00072 Response regulator receiver domain D0871_21065 PF02378 Phosphotransferase system, EIIC D0871_21065 PF00367 phosphotransferase system, EIIB D0871_21085 PF08241 Methyltransferase domain D0871_21095 PF00535 Glycosyl transferase family 2 D0871_21115 PF02566 OsmC-like protein D0871_21120 PF01047 MarR family D0871_21125 PF00578 AhpC/TSA family D0871_21125 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0871_21130 PF13192 Thioredoxin domain D0871_21130 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0871_21150 PF03466 LysR substrate binding domain D0871_21150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21160 PF01965 DJ-1/PfpI family D0871_21160 PF12833 Helix-turn-helix domain D0871_21165 PF04542 Sigma-70 region 2 D0871_21165 PF08281 Sigma-70, region 4 D0871_21180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_21180 PF00672 HAMP domain D0871_21180 PF02743 Cache domain D0871_21185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21185 PF03466 LysR substrate binding domain D0871_21190 PF02056 Family 4 glycosyl hydrolase D0871_21190 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0871_21205 PF03473 MOSC domain D0871_21205 PF03475 3-alpha domain D0871_21210 PF00270 DEAD/DEAH box helicase D0871_21210 PF00271 Helicase conserved C-terminal domain D0871_21230 PF06719 AraC-type transcriptional regulator N-terminus D0871_21230 PF12833 Helix-turn-helix domain D0871_21240 PF00005 ABC transporter D0871_21240 PF00664 ABC transporter transmembrane region D0871_21250 PF01037 Lrp/AsnC ligand binding domain D0871_21285 PF00474 Sodium:solute symporter family D0871_21295 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0871_21295 PF14850 DNA-binding domain of Proline dehydrogenase D0871_21295 PF01619 Proline dehydrogenase D0871_21295 PF00171 Aldehyde dehydrogenase family D0871_21300 PF12833 Helix-turn-helix domain D0871_21315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0871_21315 PF01243 Pyridoxamine 5'-phosphate oxidase D0871_21320 PF00512 His Kinase A (phospho-acceptor) domain D0871_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_21320 PF02743 Cache domain D0871_21325 PF02954 Bacterial regulatory protein, Fis family D0871_21325 PF00158 Sigma-54 interaction domain D0871_21325 PF00072 Response regulator receiver domain D0871_21330 PF00529 HlyD membrane-fusion protein of T1SS D0871_21345 PF00005 ABC transporter D0871_21345 PF00664 ABC transporter transmembrane region D0871_21345 PF03412 Peptidase C39 family D0871_21355 PF03358 NADPH-dependent FMN reductase D0871_21360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_21365 PF00246 Zinc carboxypeptidase D0871_21370 PF01418 Helix-turn-helix domain, rpiR family D0871_21370 PF01380 SIS domain D0871_21380 PF01380 SIS domain D0871_21385 PF02378 Phosphotransferase system, EIIC D0871_21385 PF00367 phosphotransferase system, EIIB D0871_21390 PF00267 Gram-negative porin D0871_21395 PF03575 Peptidase family S51 D0871_21400 PF03466 LysR substrate binding domain D0871_21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21405 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_21415 PF13718 GNAT acetyltransferase 2 D0871_21415 PF05127 Helicase D0871_21420 PF02195 ParB-like nuclease domain D0871_21420 PF08775 ParB family D0871_21425 PF13614 AAA domain D0871_21425 PF18607 ParA helix turn helix domain D0871_21445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_21445 PF00005 ABC transporter D0871_21450 PF00005 ABC transporter D0871_21450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0871_21460 PF08719 Domain of unknown function (DUF1768) D0871_21460 PF00925 GTP cyclohydrolase II D0871_21475 PF00072 Response regulator receiver domain D0871_21475 PF01627 Hpt domain D0871_21475 PF00512 His Kinase A (phospho-acceptor) domain D0871_21475 PF17149 Periplasmic sensor domain found in signal transduction proteins D0871_21475 PF00672 HAMP domain D0871_21475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_21485 PF01709 Transcriptional regulator D0871_21490 PF01098 Cell cycle protein D0871_21505 PF00005 ABC transporter D0871_21525 PF07694 5TMR of 5TMR-LYT D0871_21525 PF06580 Histidine kinase D0871_21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_21525 PF13492 GAF domain D0871_21530 PF00072 Response regulator receiver domain D0871_21530 PF04397 LytTr DNA-binding domain D0871_21540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0871_21545 PF00672 HAMP domain D0871_21545 PF17200 Single Cache domain 2 D0871_21545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_21560 PF00132 Bacterial transferase hexapeptide (six repeats) D0871_21575 PF03616 Sodium/glutamate symporter D0871_21585 PF00005 ABC transporter D0871_21590 PF00155 Aminotransferase class I and II D0871_21590 PF00392 Bacterial regulatory proteins, gntR family D0871_21595 PF03616 Sodium/glutamate symporter D0871_21610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0871_21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21625 PF03466 LysR substrate binding domain D0871_21630 PF17954 Quercetinase C-terminal cupin domain D0871_21630 PF02678 Pirin D0871_21635 PF07681 DoxX D0871_21650 PF00730 HhH-GPD superfamily base excision DNA repair protein D0871_21650 PF06029 AlkA N-terminal domain D0871_21655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0871_21655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0871_21665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0871_21675 PF03600 Citrate transporter D0871_21695 PF08329 Chitinase A, N-terminal domain D0871_21695 PF00704 Glycosyl hydrolases family 18 D0871_21705 PF06865 Pyrimidine/purine nucleoside phosphorylase D0871_21715 PF00563 EAL domain D0871_21715 PF00990 Diguanylate cyclase, GGDEF domain D0871_21725 PF01554 MatE D0871_21730 PF00849 RNA pseudouridylate synthase D0871_21745 PF03466 LysR substrate binding domain D0871_21745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21760 PF00990 Diguanylate cyclase, GGDEF domain D0871_21760 PF17152 Periplasmic sensor domain D0871_21770 PF00756 Putative esterase D0871_21775 PF08240 Alcohol dehydrogenase GroES-like domain D0871_21775 PF00107 Zinc-binding dehydrogenase D0871_21780 PF00797 N-acetyltransferase D0871_21785 PF03466 LysR substrate binding domain D0871_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21800 PF01614 Bacterial transcriptional regulator D0871_21800 PF09339 IclR helix-turn-helix domain D0871_21810 PF10688 Bacterial inner membrane protein D0871_21815 PF07883 Cupin domain D0871_21830 PF00294 pfkB family carbohydrate kinase D0871_21835 PF01081 KDPG and KHG aldolase D0871_21850 PF13229 Right handed beta helix region D0871_21855 PF00474 Sodium:solute symporter family D0871_21860 PF14583 Oligogalacturonate lyase D0871_21865 PF04954 Siderophore-interacting protein D0871_21865 PF08021 Siderophore-interacting FAD-binding domain D0871_21870 PF01810 LysE type translocator D0871_21875 PF01037 Lrp/AsnC ligand binding domain D0871_21880 PF18416 N-acetylglucosamine binding protein domain 2 D0871_21880 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0871_21895 PF13599 Pentapeptide repeats (9 copies) D0871_21900 PF03922 OmpW family D0871_21905 PF13533 Biotin-lipoyl like D0871_21910 PF07690 Major Facilitator Superfamily D0871_21920 PF12706 Beta-lactamase superfamily domain D0871_21930 PF01204 Trehalase D0871_21935 PF01661 Macro domain D0871_21940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_21945 PF03466 LysR substrate binding domain D0871_21945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21955 PF03466 LysR substrate binding domain D0871_21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_21970 PF13419 Haloacid dehalogenase-like hydrolase D0871_21995 PF17853 GGDEF-like domain D0871_21995 PF05651 Putative sugar diacid recognition D0871_21995 PF13556 PucR C-terminal helix-turn-helix domain D0871_22000 PF02447 GntP family permease D0871_22005 PF02595 Glycerate kinase family D0871_22010 PF00155 Aminotransferase class I and II D0871_22010 PF00392 Bacterial regulatory proteins, gntR family D0871_22030 PF00583 Acetyltransferase (GNAT) family D0871_22055 PF03264 NapC/NirT cytochrome c family, N-terminal region D0871_22060 PF01568 Molydopterin dinucleotide binding domain D0871_22060 PF18364 Molybdopterin oxidoreductase N-terminal domain D0871_22060 PF00384 Molybdopterin oxidoreductase D0871_22070 PF02581 Thiamine monophosphate synthase D0871_22075 PF02110 Hydroxyethylthiazole kinase family D0871_22080 PF03070 TENA/THI-4/PQQC family D0871_22085 PF09084 NMT1/THI5 like D0871_22090 PF00528 Binding-protein-dependent transport system inner membrane component D0871_22095 PF00005 ABC transporter D0871_22100 PF08543 Phosphomethylpyrimidine kinase D0871_22110 PF01523 Putative modulator of DNA gyrase D0871_22115 PF01523 Putative modulator of DNA gyrase D0871_22120 PF04013 Putative SAM-dependent RNA methyltransferase D0871_22175 PF10928 Protein of unknown function (DUF2810) D0871_22180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0871_22180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0871_22190 PF03009 Glycerophosphoryl diester phosphodiesterase family D0871_22200 PF00072 Response regulator receiver domain D0871_22200 PF00486 Transcriptional regulatory protein, C terminal D0871_22205 PF00672 HAMP domain D0871_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_22205 PF00512 His Kinase A (phospho-acceptor) domain D0871_22205 PF16750 Sensor domain of 2-component histidine kinase D0871_22210 PF07715 TonB-dependent Receptor Plug Domain D0871_22210 PF00593 TonB dependent receptor D0871_22220 PF01618 MotA/TolQ/ExbB proton channel family D0871_22225 PF01618 MotA/TolQ/ExbB proton channel family D0871_22230 PF02472 Biopolymer transport protein ExbD/TolR D0871_22270 PF01297 Zinc-uptake complex component A periplasmic D0871_22275 PF00005 ABC transporter D0871_22280 PF00950 ABC 3 transport family D0871_22295 PF00326 Prolyl oligopeptidase family D0871_22295 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0871_22300 PF07690 Major Facilitator Superfamily D0871_22305 PF00491 Arginase family D0871_22310 PF17810 Arginine decarboxylase helical bundle domain D0871_22310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0871_22310 PF17944 Arginine decarboxylase C-terminal helical extension D0871_22315 PF00753 Metallo-beta-lactamase superfamily D0871_22320 PF08443 RimK-like ATP-grasp domain D0871_22320 PF18030 RimK PreATP-grasp domain D0871_22325 PF18030 RimK PreATP-grasp domain D0871_22325 PF08443 RimK-like ATP-grasp domain D0871_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_22335 PF03466 LysR substrate binding domain D0871_22360 PF00232 Glycosyl hydrolase family 1 D0871_22370 PF00512 His Kinase A (phospho-acceptor) domain D0871_22370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_22375 PF00158 Sigma-54 interaction domain D0871_22375 PF00072 Response regulator receiver domain D0871_22375 PF02954 Bacterial regulatory protein, Fis family D0871_22380 PF00990 Diguanylate cyclase, GGDEF domain D0871_22380 PF05230 MASE2 domain D0871_22385 PF05525 Branched-chain amino acid transport protein D0871_22410 PF01266 FAD dependent oxidoreductase D0871_22420 PF01212 Beta-eliminating lyase D0871_22440 PF07662 Na+ dependent nucleoside transporter C-terminus D0871_22440 PF01773 Na+ dependent nucleoside transporter N-terminus D0871_22440 PF07670 Nucleoside recognition D0871_22450 PF13532 2OG-Fe(II) oxygenase superfamily D0871_22455 PF00990 Diguanylate cyclase, GGDEF domain D0871_22455 PF05230 MASE2 domain D0871_22460 PF12729 Four helix bundle sensory module for signal transduction D0871_22460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_22460 PF00672 HAMP domain D0871_22475 PF00990 Diguanylate cyclase, GGDEF domain D0871_22485 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D0871_22500 PF01625 Peptide methionine sulfoxide reductase D0871_22500 PF01641 SelR domain D0871_22505 PF02566 OsmC-like protein D0871_22510 PF12464 Maltose acetyltransferase D0871_22510 PF14602 Hexapeptide repeat of succinyl-transferase D0871_22545 PF03466 LysR substrate binding domain D0871_22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_22550 PF13419 Haloacid dehalogenase-like hydrolase D0871_22565 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0871_22570 PF00194 Eukaryotic-type carbonic anhydrase D0871_22575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0871_22580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_22585 PF12704 MacB-like periplasmic core domain D0871_22585 PF00005 ABC transporter D0871_22585 PF02687 FtsX-like permease family D0871_22590 PF02321 Outer membrane efflux protein D0871_22595 PF00657 GDSL-like Lipase/Acylhydrolase D0871_22610 PF03611 PTS system sugar-specific permease component D0871_22620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_22625 PF00356 Bacterial regulatory proteins, lacI family D0871_22630 PF13419 Haloacid dehalogenase-like hydrolase D0871_22640 PF00266 Aminotransferase class-V D0871_22655 PF00005 ABC transporter D0871_22660 PF00528 Binding-protein-dependent transport system inner membrane component D0871_22665 PF00392 Bacterial regulatory proteins, gntR family D0871_22665 PF07702 UTRA domain D0871_22680 PF04393 Protein of unknown function (DUF535) D0871_22690 PF01266 FAD dependent oxidoreductase D0871_22695 PF00246 Zinc carboxypeptidase D0871_22695 PF18027 Cytosolic carboxypeptidase N-terminal domain D0871_22705 PF00691 OmpA family D0871_22705 PF01389 OmpA-like transmembrane domain D0871_22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_22710 PF03466 LysR substrate binding domain D0871_22720 PF03466 LysR substrate binding domain D0871_22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_22730 PF00854 POT family D0871_22735 PF03315 Serine dehydratase beta chain D0871_22735 PF03313 Serine dehydratase alpha chain D0871_22755 PF08264 Anticodon-binding domain of tRNA D0871_22755 PF00133 tRNA synthetases class I (I, L, M and V) D0871_22765 PF01464 Transglycosylase SLT domain D0871_22785 PF00460 Flagella basal body rod protein D0871_22790 PF00460 Flagella basal body rod protein D0871_22790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_22795 PF03963 Flagellar hook capping protein - N-terminal region D0871_22795 PF13861 FlgD Tudor-like domain D0871_22795 PF13860 FlgD Ig-like domain D0871_22800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_22800 PF00460 Flagella basal body rod protein D0871_22800 PF07559 Flagellar basal body protein FlaE D0871_22805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_22805 PF00460 Flagella basal body rod protein D0871_22810 PF00460 Flagella basal body rod protein D0871_22810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_22815 PF02107 Flagellar L-ring protein D0871_22820 PF02119 Flagellar P-ring protein D0871_22825 PF10135 Rod binding protein D0871_22825 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0871_22830 PF00460 Flagella basal body rod protein D0871_22830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0871_22835 PF00669 Bacterial flagellin N-terminal helical region D0871_22855 PF01070 FMN-dependent dehydrogenase D0871_22880 PF00581 Rhodanese-like domain D0871_22890 PF00166 Chaperonin 10 Kd subunit D0871_22895 PF00118 TCP-1/cpn60 chaperonin family D0871_22910 PF01810 LysE type translocator D0871_22915 PF03466 LysR substrate binding domain D0871_22915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_22930 PF08359 YsiA-like protein, C-terminal region D0871_22930 PF00440 Bacterial regulatory proteins, tetR family D0871_22940 PF02872 5'-nucleotidase, C-terminal domain D0871_22940 PF00149 Calcineurin-like phosphoesterase D0871_22945 PF03060 Nitronate monooxygenase D0871_22950 PF07971 Glycosyl hydrolase family 92 D0871_22950 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0871_22955 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0871_22955 PF07971 Glycosyl hydrolase family 92 D0871_22965 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0871_22965 PF07971 Glycosyl hydrolase family 92 D0871_22970 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0871_22970 PF07971 Glycosyl hydrolase family 92 D0871_22985 PF01625 Peptide methionine sulfoxide reductase D0871_22985 PF01641 SelR domain D0871_22990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_22995 PF08220 DeoR-like helix-turn-helix domain D0871_22995 PF00455 DeoR C terminal sensor domain D0871_23005 PF06628 Catalase-related immune-responsive D0871_23005 PF00199 Catalase D0871_23015 PF00857 Isochorismatase family D0871_23025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0871_23025 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0871_23050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23050 PF03466 LysR substrate binding domain D0871_23055 PF00691 OmpA family D0871_23055 PF01389 OmpA-like transmembrane domain D0871_23065 PF06629 MltA-interacting protein MipA D0871_23075 PF04170 NlpE N-terminal domain D0871_23075 PF17185 NlpE C-terminal OB domain D0871_23085 PF02001 Protein of unknown function DUF134 D0871_23110 PF03144 Elongation factor Tu domain 2 D0871_23110 PF00679 Elongation factor G C-terminus D0871_23110 PF00009 Elongation factor Tu GTP binding domain D0871_23110 PF14492 Elongation Factor G, domain II D0871_23110 PF03764 Elongation factor G, domain IV D0871_23120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0871_23120 PF13378 Enolase C-terminal domain-like D0871_23130 PF03466 LysR substrate binding domain D0871_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23150 PF00376 MerR family regulatory protein D0871_23150 PF09278 MerR, DNA binding D0871_23180 PF13091 PLD-like domain D0871_23190 PF13533 Biotin-lipoyl like D0871_23195 PF00873 AcrB/AcrD/AcrF family D0871_23225 PF08402 TOBE domain D0871_23225 PF00005 ABC transporter D0871_23250 PF07702 UTRA domain D0871_23250 PF00392 Bacterial regulatory proteins, gntR family D0871_23255 PF02028 BCCT, betaine/carnitine/choline family transporter D0871_23260 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D0871_23260 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0871_23260 PF00703 Glycosyl hydrolases family 2 D0871_23260 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0871_23265 PF00196 Bacterial regulatory proteins, luxR family D0871_23275 PF00990 Diguanylate cyclase, GGDEF domain D0871_23275 PF07694 5TMR of 5TMR-LYT D0871_23310 PF09077 Mu B transposition protein, C terminal D0871_23310 PF13401 AAA domain D0871_23340 PF04245 37-kD nucleoid-associated bacterial protein D0871_23365 PF02810 SEC-C motif D0871_23530 PF01555 DNA methylase D0871_23560 PF13533 Biotin-lipoyl like D0871_23565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23565 PF03466 LysR substrate binding domain D0871_23575 PF13416 Bacterial extracellular solute-binding protein D0871_23580 PF00579 tRNA synthetases class I (W and Y) D0871_23600 PF02896 PEP-utilising enzyme, TIM barrel domain D0871_23600 PF00391 PEP-utilising enzyme, mobile domain D0871_23600 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0871_23605 PF03618 Kinase/pyrophosphorylase D0871_23610 PF17763 Glutaminase/Asparaginase C-terminal domain D0871_23610 PF00710 Asparaginase, N-terminal D0871_23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23620 PF03466 LysR substrate binding domain D0871_23635 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0871_23645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0871_23645 PF12833 Helix-turn-helix domain D0871_23660 PF08240 Alcohol dehydrogenase GroES-like domain D0871_23660 PF00107 Zinc-binding dehydrogenase D0871_23665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0871_23675 PF03466 LysR substrate binding domain D0871_23675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_23680 PF03466 LysR substrate binding domain D0871_23690 PF00270 DEAD/DEAH box helicase D0871_23690 PF00271 Helicase conserved C-terminal domain D0871_23735 PF00155 Aminotransferase class I and II D0871_23740 PF12833 Helix-turn-helix domain D0871_23740 PF01497 Periplasmic binding protein D0871_23770 PF05661 Protein of unknown function (DUF808) D0871_23775 PF01979 Amidohydrolase family D0871_23785 PF01679 Proteolipid membrane potential modulator D0871_23795 PF03473 MOSC domain D0871_23795 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_23795 PF03473 MOSC domain D0871_23795 PF00111 2Fe-2S iron-sulfur cluster binding domain D0871_23795 PF03476 MOSC N-terminal beta barrel domain D0871_23795 PF03476 MOSC N-terminal beta barrel domain D0871_23800 PF02540 NAD synthase D0871_23805 PF01467 Cytidylyltransferase-like D0871_23850 PF00005 ABC transporter D0871_23855 PF01032 FecCD transport family D0871_23865 PF02472 Biopolymer transport protein ExbD/TolR D0871_23870 PF01618 MotA/TolQ/ExbB proton channel family D0871_23875 PF03544 Gram-negative bacterial TonB protein C-terminal D0871_23880 PF04055 Radical SAM superfamily D0871_23885 PF06228 Haem utilisation ChuX/HutX D0871_23890 PF01243 Pyridoxamine 5'-phosphate oxidase D0871_23900 PF01584 CheW-like domain D0871_23900 PF00072 Response regulator receiver domain D0871_23915 PF07944 Beta-L-arabinofuranosidase, GH127 D0871_23925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0871_23925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0871_23930 PF00596 Class II Aldolase and Adducin N-terminal domain D0871_23935 PF11762 L-arabinose isomerase C-terminal domain D0871_23935 PF02610 L-arabinose isomerase D0871_23945 PF02311 AraC-like ligand binding domain D0871_23945 PF12833 Helix-turn-helix domain D0871_23950 PF01263 Aldose 1-epimerase D0871_23955 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain D0871_23955 PF04616 Glycosyl hydrolases family 43 D0871_23985 PF00141 Peroxidase D0871_23990 PF00210 Ferritin-like domain D0871_24000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24000 PF03466 LysR substrate binding domain D0871_24015 PF01752 Collagenase D0871_24015 PF08453 Peptidase family M9 N-terminal D0871_24015 PF04151 Bacterial pre-peptidase C-terminal domain D0871_24025 PF00128 Alpha amylase, catalytic domain D0871_24040 PF00999 Sodium/hydrogen exchanger family D0871_24040 PF02254 TrkA-N domain D0871_24045 PF02525 Flavodoxin-like fold D0871_24050 PF00582 Universal stress protein family D0871_24055 PF12848 ABC transporter D0871_24055 PF16326 ABC transporter C-terminal domain D0871_24055 PF00005 ABC transporter D0871_24060 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0871_24060 PF00326 Prolyl oligopeptidase family D0871_24070 PF13533 Biotin-lipoyl like D0871_24075 PF00873 AcrB/AcrD/AcrF family D0871_24080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0871_24090 PF13302 Acetyltransferase (GNAT) domain D0871_24100 PF13185 GAF domain D0871_24100 PF00990 Diguanylate cyclase, GGDEF domain D0871_24120 PF00873 AcrB/AcrD/AcrF family D0871_24145 PF01568 Molydopterin dinucleotide binding domain D0871_24145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0871_24145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0871_24145 PF12838 4Fe-4S dicluster domain D0871_24145 PF00384 Molybdopterin oxidoreductase D0871_24165 PF00005 ABC transporter D0871_24175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24175 PF00672 HAMP domain D0871_24185 PF10282 Lactonase, 7-bladed beta-propeller D0871_24190 PF02567 Phenazine biosynthesis-like protein D0871_24195 PF01161 Phosphatidylethanolamine-binding protein D0871_24205 PF01758 Sodium Bile acid symporter family D0871_24225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_24230 PF02378 Phosphotransferase system, EIIC D0871_24230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_24235 PF00107 Zinc-binding dehydrogenase D0871_24235 PF08240 Alcohol dehydrogenase GroES-like domain D0871_24270 PF03222 Tryptophan/tyrosine permease family D0871_24280 PF00672 HAMP domain D0871_24280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24280 PF02743 Cache domain D0871_24310 PF01551 Peptidase family M23 D0871_24310 PF01476 LysM domain D0871_24310 PF08525 Opacity-associated protein A N-terminal motif D0871_24315 PF08448 PAS fold D0871_24315 PF00990 Diguanylate cyclase, GGDEF domain D0871_24315 PF00563 EAL domain D0871_24315 PF08447 PAS fold D0871_24320 PF03466 LysR substrate binding domain D0871_24320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24325 PF07690 Major Facilitator Superfamily D0871_24345 PF00462 Glutaredoxin D0871_24350 PF00892 EamA-like transporter family D0871_24365 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0871_24380 PF12833 Helix-turn-helix domain D0871_24385 PF01810 LysE type translocator D0871_24395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0871_24395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0871_24395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0871_24395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0871_24400 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D0871_24400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0871_24405 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0871_24410 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D0871_24415 PF00510 Cytochrome c oxidase subunit III D0871_24435 PF02628 Cytochrome oxidase assembly protein D0871_24440 PF01040 UbiA prenyltransferase family D0871_24445 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0871_24445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0871_24480 PF00313 'Cold-shock' DNA-binding domain D0871_24485 PF03889 Alternative ribosome-rescue factor A D0871_24490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24490 PF13426 PAS domain D0871_24490 PF08447 PAS fold D0871_24500 PF00990 Diguanylate cyclase, GGDEF domain D0871_24515 PF00005 ABC transporter D0871_24515 PF12704 MacB-like periplasmic core domain D0871_24515 PF02687 FtsX-like permease family D0871_24520 PF02687 FtsX-like permease family D0871_24520 PF12704 MacB-like periplasmic core domain D0871_24520 PF00005 ABC transporter D0871_24530 PF00672 HAMP domain D0871_24530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24530 PF17200 Single Cache domain 2 D0871_24540 PF00210 Ferritin-like domain D0871_24550 PF07995 Glucose / Sorbosone dehydrogenase D0871_24555 PF00465 Iron-containing alcohol dehydrogenase D0871_24570 PF00892 EamA-like transporter family D0871_24595 PF03466 LysR substrate binding domain D0871_24595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24605 PF00501 AMP-binding enzyme D0871_24605 PF13193 AMP-binding enzyme C-terminal domain D0871_24610 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D0871_24615 PF01329 Pterin 4 alpha carbinolamine dehydratase D0871_24640 PF12843 Putative quorum-sensing-regulated virulence factor D0871_24645 PF00271 Helicase conserved C-terminal domain D0871_24645 PF00270 DEAD/DEAH box helicase D0871_24650 PF09905 DNA-binding protein VF530 D0871_24655 PF00291 Pyridoxal-phosphate dependent enzyme D0871_24665 PF01470 Pyroglutamyl peptidase D0871_24675 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0871_24675 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0871_24680 PF00270 DEAD/DEAH box helicase D0871_24680 PF00271 Helicase conserved C-terminal domain D0871_24700 PF00563 EAL domain D0871_24700 PF12792 CSS motif domain associated with EAL D0871_24705 PF00005 ABC transporter D0871_24710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24710 PF12729 Four helix bundle sensory module for signal transduction D0871_24710 PF00672 HAMP domain D0871_24745 PF00884 Sulfatase D0871_24750 PF13186 Iron-sulfur cluster-binding domain D0871_24750 PF04055 Radical SAM superfamily D0871_24755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24755 PF03466 LysR substrate binding domain D0871_24770 PF12849 PBP superfamily domain D0871_24780 PF12833 Helix-turn-helix domain D0871_24785 PF00773 RNB domain D0871_24785 PF00575 S1 RNA binding domain D0871_24785 PF08206 Ribonuclease B OB domain D0871_24790 PF03880 DbpA RNA binding domain D0871_24790 PF00271 Helicase conserved C-terminal domain D0871_24790 PF00270 DEAD/DEAH box helicase D0871_24795 PF00563 EAL domain D0871_24795 PF00990 Diguanylate cyclase, GGDEF domain D0871_24795 PF13426 PAS domain D0871_24805 PF00871 Acetokinase family D0871_24810 PF13426 PAS domain D0871_24810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_24810 PF08447 PAS fold D0871_24820 PF10063 Uncharacterized integral membrane protein (DUF2301) D0871_24825 PF00682 HMGL-like D0871_24835 PF01039 Carboxyl transferase domain D0871_24840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_24840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_24840 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_24845 PF09278 MerR, DNA binding D0871_24845 PF00376 MerR family regulatory protein D0871_24850 PF02803 Thiolase, C-terminal domain D0871_24850 PF00108 Thiolase, N-terminal domain D0871_24855 PF00171 Aldehyde dehydrogenase family D0871_24860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0871_24860 PF02770 Acyl-CoA dehydrogenase, middle domain D0871_24860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0871_24865 PF00378 Enoyl-CoA hydratase/isomerase D0871_24870 PF00378 Enoyl-CoA hydratase/isomerase D0871_24875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0871_24875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0871_24885 PF06481 COX Aromatic Rich Motif D0871_24885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0871_24890 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0871_24895 PF00510 Cytochrome c oxidase subunit III D0871_24905 PF01040 UbiA prenyltransferase family D0871_24920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0871_24925 PF08031 Berberine and berberine like D0871_24925 PF01565 FAD binding domain D0871_24930 PF03466 LysR substrate binding domain D0871_24930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24945 PF03466 LysR substrate binding domain D0871_24950 PF00005 ABC transporter D0871_24955 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_24960 PF00528 Binding-protein-dependent transport system inner membrane component D0871_24965 PF00528 Binding-protein-dependent transport system inner membrane component D0871_24975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_24975 PF03466 LysR substrate binding domain D0871_24980 PF00043 Glutathione S-transferase, C-terminal domain D0871_24980 PF02798 Glutathione S-transferase, N-terminal domain D0871_24990 PF00364 Biotin-requiring enzyme D0871_24990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0871_24990 PF02817 e3 binding domain D0871_24995 PF02779 Transketolase, pyrimidine binding domain D0871_24995 PF02780 Transketolase, C-terminal domain D0871_25000 PF00676 Dehydrogenase E1 component D0871_25015 PF00012 Hsp70 protein D0871_25020 PF04314 Copper chaperone PCu(A)C D0871_25045 PF01497 Periplasmic binding protein D0871_25050 PF01032 FecCD transport family D0871_25055 PF01032 FecCD transport family D0871_25060 PF00005 ABC transporter D0871_25065 PF13411 MerR HTH family regulatory protein D0871_25080 PF07715 TonB-dependent Receptor Plug Domain D0871_25080 PF00593 TonB dependent receptor D0871_25115 PF12805 FUSC-like inner membrane protein yccS D0871_25120 PF00580 UvrD/REP helicase N-terminal domain D0871_25120 PF12462 DNA helicase IV / RNA helicase N terminal D0871_25120 PF13361 UvrD-like helicase C-terminal domain D0871_25125 PF02142 MGS-like domain D0871_25130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0871_25135 PF00672 HAMP domain D0871_25135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_25135 PF00072 Response regulator receiver domain D0871_25135 PF00512 His Kinase A (phospho-acceptor) domain D0871_25135 PF01627 Hpt domain D0871_25150 PF00486 Transcriptional regulatory protein, C terminal D0871_25150 PF00072 Response regulator receiver domain D0871_25160 PF00884 Sulfatase D0871_25165 PF00884 Sulfatase D0871_25175 PF03466 LysR substrate binding domain D0871_25175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25180 PF00884 Sulfatase D0871_25185 PF13186 Iron-sulfur cluster-binding domain D0871_25185 PF04055 Radical SAM superfamily D0871_25190 PF17863 AAA lid domain D0871_25190 PF07726 ATPase family associated with various cellular activities (AAA) D0871_25205 PF00092 von Willebrand factor type A domain D0871_25220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0871_25225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25225 PF03466 LysR substrate binding domain D0871_25230 PF00781 Diacylglycerol kinase catalytic domain D0871_25235 PF04076 Bacterial OB fold (BOF) protein D0871_25255 PF04055 Radical SAM superfamily D0871_25255 PF13186 Iron-sulfur cluster-binding domain D0871_25265 PF18081 Fanconi anemia-associated nuclease SAP domain D0871_25265 PF08774 VRR-NUC domain D0871_25285 PF01435 Peptidase family M48 D0871_25290 PF04011 LemA family D0871_25295 PF03606 C4-dicarboxylate anaerobic carrier D0871_25305 PF00583 Acetyltransferase (GNAT) family D0871_25305 PF00814 Glycoprotease family D0871_25315 PF00072 Response regulator receiver domain D0871_25315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_25320 PF00155 Aminotransferase class I and II D0871_25325 PF01926 50S ribosome-binding GTPase D0871_25335 PF01752 Collagenase D0871_25335 PF04151 Bacterial pre-peptidase C-terminal domain D0871_25335 PF08453 Peptidase family M9 N-terminal D0871_25345 PF12833 Helix-turn-helix domain D0871_25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25350 PF03466 LysR substrate binding domain D0871_25370 PF13629 Pilus formation protein N terminal region D0871_25370 PF00263 Bacterial type II and III secretion system protein D0871_25370 PF04972 BON domain D0871_25385 PF00437 Type II/IV secretion system protein D0871_25420 PF05736 OprF membrane domain D0871_25420 PF00691 OmpA family D0871_25430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25430 PF03466 LysR substrate binding domain D0871_25435 PF03466 LysR substrate binding domain D0871_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_25445 PF00512 His Kinase A (phospho-acceptor) domain D0871_25445 PF00072 Response regulator receiver domain D0871_25445 PF09456 RcsC Alpha-Beta-Loop (ABL) D0871_25450 PF13188 PAS domain D0871_25450 PF03707 Bacterial signalling protein N terminal repeat D0871_25450 PF00990 Diguanylate cyclase, GGDEF domain D0871_25450 PF00563 EAL domain D0871_25455 PF00196 Bacterial regulatory proteins, luxR family D0871_25455 PF00072 Response regulator receiver domain D0871_25460 PF00990 Diguanylate cyclase, GGDEF domain D0871_25470 PF00196 Bacterial regulatory proteins, luxR family D0871_25470 PF00072 Response regulator receiver domain D0871_25495 PF00072 Response regulator receiver domain D0871_25495 PF01584 CheW-like domain D0871_25515 PF00892 EamA-like transporter family D0871_25530 PF01569 PAP2 superfamily D0871_25545 PF00893 Small Multidrug Resistance protein D0871_25550 PF00892 EamA-like transporter family D0871_25570 PF00171 Aldehyde dehydrogenase family D0871_25575 PF00939 Sodium:sulfate symporter transmembrane region D0871_25580 PF00989 PAS fold D0871_25580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_25580 PF17203 Single cache domain 3 D0871_25580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0871_25585 PF00072 Response regulator receiver domain D0871_25585 PF12431 Transcriptional regulator D0871_25595 PF13187 4Fe-4S dicluster domain D0871_25595 PF01645 Conserved region in glutamate synthase D0871_25605 PF00141 Peroxidase D0871_25620 PF01757 Acyltransferase family D0871_25630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0871_25635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0871_25655 PF03448 MgtE intracellular N domain D0871_25655 PF01769 Divalent cation transporter D0871_25655 PF00571 CBS domain D0871_25675 PF01327 Polypeptide deformylase D0871_25680 PF09278 MerR, DNA binding D0871_25680 PF00376 MerR family regulatory protein D0871_25695 PF02253 Phospholipase A1 D0871_25715 PF00664 ABC transporter transmembrane region D0871_25715 PF00005 ABC transporter D0871_25720 PF14579 Helix-hairpin-helix motif D0871_25720 PF00929 Exonuclease D0871_25720 PF02811 PHP domain D0871_25720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0871_25720 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0871_25720 PF11490 DNA polymerase III polC-type N-terminus II D0871_25725 PF03466 LysR substrate binding domain D0871_25725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_25730 PF17848 Acetyl-coA carboxylase zinc finger domain D0871_25730 PF01039 Carboxyl transferase domain D0871_25735 PF01212 Beta-eliminating lyase D0871_25755 PF02347 Glycine cleavage system P-protein D0871_25760 PF01597 Glycine cleavage H-protein D0871_25765 PF00464 Serine hydroxymethyltransferase D0871_25775 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0871_25775 PF01571 Aminomethyltransferase folate-binding domain D0871_25785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0871_25795 PF00873 AcrB/AcrD/AcrF family D0871_25805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0871_25805 PF02378 Phosphotransferase system, EIIC D0871_25810 PF00294 pfkB family carbohydrate kinase D0871_25815 PF00381 PTS HPr component phosphorylation site D0871_25815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0871_25820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0871_25820 PF00356 Bacterial regulatory proteins, lacI family D0871_25840 PF00563 EAL domain D0871_25840 PF01590 GAF domain D0871_25840 PF00990 Diguanylate cyclase, GGDEF domain D0871_25840 PF00989 PAS fold D0871_25845 PF00528 Binding-protein-dependent transport system inner membrane component D0871_25850 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0871_25855 PF00528 Binding-protein-dependent transport system inner membrane component D0871_25860 PF00005 ABC transporter D0871_25865 PF02887 Pyruvate kinase, alpha/beta domain D0871_25865 PF00224 Pyruvate kinase, barrel domain D0871_25870 PF07690 Major Facilitator Superfamily D0871_25880 PF00672 HAMP domain D0871_25880 PF00512 His Kinase A (phospho-acceptor) domain D0871_25880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0871_25885 PF14532 Sigma-54 interaction domain D0871_25885 PF00072 Response regulator receiver domain D0871_25885 PF02954 Bacterial regulatory protein, Fis family D0871_25895 PF00465 Iron-containing alcohol dehydrogenase D0871_25900 PF06719 AraC-type transcriptional regulator N-terminus D0871_25900 PF12833 Helix-turn-helix domain D0871_25910 PF06483 Chitinase C D0871_25910 PF00704 Glycosyl hydrolases family 18 D0871_25915 PF00483 Nucleotidyl transferase D0871_25920 PF01268 Formate--tetrahydrofolate ligase D0871_25925 PF00294 pfkB family carbohydrate kinase D0871_25945 PF11849 Domain of unknown function (DUF3369) D0871_25955 PF13419 Haloacid dehalogenase-like hydrolase D0871_25965 PF00672 HAMP domain D0871_25965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0871_25975 PF04336 Acyl carrier protein phosphodiesterase D0871_25980 PF00271 Helicase conserved C-terminal domain D0871_25980 PF00270 DEAD/DEAH box helicase D0871_25985 PF00563 EAL domain D0871_25985 PF12792 CSS motif domain associated with EAL D0871_26000 PF01292 Prokaryotic cytochrome b561 D0871_26005 PF04264 YceI-like domain D0871_26010 PF01226 Formate/nitrite transporter D0871_26020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0871_26020 PF03466 LysR substrate binding domain D0871_26025 PF06496 Protein of unknown function (DUF1097) D0871_26030 PF11398 Protein of unknown function (DUF2813) D0871_26035 PF00149 Calcineurin-like phosphoesterase D0871_26035 PF02872 5'-nucleotidase, C-terminal domain D0871_26040 PF03741 Integral membrane protein TerC family D0871_26055 PF12262 Bacterial virulence factor lipase N-terminal D0871_26060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0871_26075 PF03061 Thioesterase superfamily D0871_26085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0871_26085 PF12793 Sugar transport-related sRNA regulator N-term D0871_26110 PF00226 DnaJ domain D0871_26110 PF01556 DnaJ C terminal domain D0871_26110 PF00684 DnaJ central domain D0871_26120 PF13188 PAS domain D0871_26120 PF03707 Bacterial signalling protein N terminal repeat D0871_26120 PF00990 Diguanylate cyclase, GGDEF domain D0871_26120 PF00563 EAL domain D0871_26125 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0871_26125 PF07055 Enoyl reductase FAD binding domain D0871_26125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0871_26130 PF13472 GDSL-like Lipase/Acylhydrolase family D0871_26135 PF00005 ABC transporter D0871_26150 PF02626 Carboxyltransferase domain, subdomain A and B D0871_26155 PF02682 Carboxyltransferase domain, subdomain C and D D0871_26160 PF03746 LamB/YcsF family D0871_26165 PF13426 PAS domain D0871_26165 PF08448 PAS fold D0871_26165 PF08447 PAS fold D0871_26165 PF05231 MASE1 D0871_26165 PF00990 Diguanylate cyclase, GGDEF domain D0871_26165 PF00563 EAL domain D0871_26170 PF16363 GDP-mannose 4,6 dehydratase D0871_26190 PF11999 Protein of unknown function (DUF3494) D0871_26190 PF02368 Bacterial Ig-like domain (group 2) D0871_26195 PF00691 OmpA family D0871_26195 PF01389 OmpA-like transmembrane domain D0871_26225 PF00691 OmpA family D0871_26280 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D0871_26290 PF00589 Phage integrase family D0871_26290 PF02899 Phage integrase, N-terminal SAM-like domain D0871_26315 PF11999 Protein of unknown function (DUF3494) D0871_26315 PF02368 Bacterial Ig-like domain (group 2) D0871_26335 PF02954 Bacterial regulatory protein, Fis family D0871_26350 PF08525 Opacity-associated protein A N-terminal motif D0871_26350 PF01551 Peptidase family M23 D0871_26350 PF01476 LysM domain D0871_26400 PF00691 OmpA family D0871_26400 PF01389 OmpA-like transmembrane domain D0871_26455 PF02796 Helix-turn-helix domain of resolvase D0871_26455 PF00239 Resolvase, N terminal domain D0871_26475 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0871_26505 PF08401 Domain of unknown function (DUF1738) D0871_26505 PF18818 Metallopeptidase superfamily domain D0871_26505 PF13362 Toprim domain D0871_26515 PF03230 Antirestriction protein D0871_26535 PF01751 Toprim domain D0871_26535 PF01131 DNA topoisomerase D0871_26590 PF10502 Signal peptidase, peptidase S26 D0871_26595 PF01848 Hok/gef family D0871_26660 PF03743 Bacterial conjugation TrbI-like protein D0871_26670 PF03524 Conjugal transfer protein D0871_26690 PF00437 Type II/IV secretion system protein D0871_26700 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0871_26705 PF05101 Type IV secretory pathway, VirB3-like protein D0871_26710 PF04956 TrbC/VIRB2 family D0871_26735 PF13614 AAA domain