locus-tag class description GNY17_00005 PF02028 BCCT, betaine/carnitine/choline family transporter GNY17_00010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_00010 PF00672 HAMP domain GNY17_00030 PF00155 Aminotransferase class I and II GNY17_00055 PF00155 Aminotransferase class I and II GNY17_00055 PF00392 Bacterial regulatory proteins, gntR family GNY17_00065 PF00152 tRNA synthetases class II (D, K and N) GNY17_00065 PF01336 OB-fold nucleic acid binding domain GNY17_00070 PF12729 Four helix bundle sensory module for signal transduction GNY17_00070 PF00672 HAMP domain GNY17_00070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_00075 PF01242 6-pyruvoyl tetrahydropterin synthase GNY17_00085 PF00563 EAL domain GNY17_00085 PF04940 Sensors of blue-light using FAD GNY17_00090 PF03315 Serine dehydratase beta chain GNY17_00090 PF03313 Serine dehydratase alpha chain GNY17_00095 PF03222 Tryptophan/tyrosine permease family GNY17_00100 PF00293 NUDIX domain GNY17_00110 PF09308 LuxQ, periplasmic GNY17_00110 PF00072 Response regulator receiver domain GNY17_00110 PF00512 His Kinase A (phospho-acceptor) domain GNY17_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_00115 PF00425 chorismate binding enzyme GNY17_00115 PF04715 Anthranilate synthase component I, N terminal region GNY17_00135 PF04317 YcjX-like family, DUF463 GNY17_00140 PF05128 Domain of unknown function (DUF697) GNY17_00145 PF18024 Helix-turn-helix domain GNY17_00145 PF00158 Sigma-54 interaction domain GNY17_00150 PF13302 Acetyltransferase (GNAT) domain GNY17_00165 PF00589 Phage integrase family GNY17_00165 PF13495 Phage integrase, N-terminal SAM-like domain GNY17_00255 PF01042 Endoribonuclease L-PSP GNY17_00350 PF01337 Barstar (barnase inhibitor) GNY17_00575 PF01042 Endoribonuclease L-PSP GNY17_00695 PF13737 Transposase DDE domain GNY17_00780 PF00857 Isochorismatase family GNY17_00785 PF00583 Acetyltransferase (GNAT) family GNY17_00800 PF11008 Protein of unknown function (DUF2846) GNY17_00805 PF01653 NAD-dependent DNA ligase adenylation domain GNY17_00805 PF00533 BRCA1 C Terminus (BRCT) domain GNY17_00805 PF12826 Helix-hairpin-helix motif GNY17_00805 PF03120 NAD-dependent DNA ligase OB-fold domain GNY17_00880 PF13614 AAA domain GNY17_01085 PF01810 LysE type translocator GNY17_01350 PF13276 HTH-like domain GNY17_01350 PF13333 Integrase core domain GNY17_01350 PF00665 Integrase core domain GNY17_01400 PF03553 Na+/H+ antiporter family GNY17_01405 PF00120 Glutamine synthetase, catalytic domain GNY17_01415 PF07722 Peptidase C26 GNY17_01420 PF01381 Helix-turn-helix GNY17_01420 PF07883 Cupin domain GNY17_01425 PF00171 Aldehyde dehydrogenase family GNY17_01430 PF01266 FAD dependent oxidoreductase GNY17_01435 PF00795 Carbon-nitrogen hydrolase GNY17_01440 PF04371 Porphyromonas-type peptidyl-arginine deiminase GNY17_01445 PF00171 Aldehyde dehydrogenase family GNY17_01450 PF00202 Aminotransferase class-III GNY17_01455 PF01368 DHH family GNY17_01455 PF02833 DHHA2 domain GNY17_01465 PF00196 Bacterial regulatory proteins, luxR family GNY17_01465 PF00563 EAL domain GNY17_01475 PF01411 tRNA synthetases class II (A) GNY17_01475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNY17_01475 PF02272 DHHA1 domain GNY17_01480 PF12833 Helix-turn-helix domain GNY17_01490 PF01047 MarR family GNY17_01495 PF04237 YjbR GNY17_01505 PF01928 CYTH domain GNY17_01515 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_01515 PF12464 Maltose acetyltransferase GNY17_01530 PF00672 HAMP domain GNY17_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_01530 PF00512 His Kinase A (phospho-acceptor) domain GNY17_01530 PF01627 Hpt domain GNY17_01530 PF00072 Response regulator receiver domain GNY17_01530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GNY17_01535 PF03707 Bacterial signalling protein N terminal repeat GNY17_01535 PF00990 Diguanylate cyclase, GGDEF domain GNY17_01535 PF00563 EAL domain GNY17_01550 PF04204 Homoserine O-succinyltransferase GNY17_01565 PF13520 Amino acid permease GNY17_01575 PF03279 Bacterial lipid A biosynthesis acyltransferase GNY17_01580 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GNY17_01585 PF01810 LysE type translocator GNY17_01595 PF01235 Sodium:alanine symporter family GNY17_01620 PF00884 Sulfatase GNY17_01625 PF08521 Two-component sensor kinase N-terminal GNY17_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_01625 PF00512 His Kinase A (phospho-acceptor) domain GNY17_01630 PF00072 Response regulator receiver domain GNY17_01630 PF00486 Transcriptional regulatory protein, C terminal GNY17_01650 PF00501 AMP-binding enzyme GNY17_01660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNY17_01665 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_01670 PF00005 ABC transporter GNY17_01670 PF00571 CBS domain GNY17_01685 PF02028 BCCT, betaine/carnitine/choline family transporter GNY17_01690 PF00583 Acetyltransferase (GNAT) family GNY17_01695 PF00202 Aminotransferase class-III GNY17_01700 PF06339 Ectoine synthase GNY17_01705 PF00696 Amino acid kinase family GNY17_01705 PF13840 ACT domain GNY17_01710 PF03150 Di-haem cytochrome c peroxidase GNY17_01710 PF00034 Cytochrome c GNY17_01725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_01740 PF17203 Single cache domain 3 GNY17_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_01740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNY17_01740 PF00989 PAS fold GNY17_01745 PF00072 Response regulator receiver domain GNY17_01745 PF12431 Transcriptional regulator GNY17_01800 PF00717 Peptidase S24-like GNY17_01800 PF01381 Helix-turn-helix GNY17_01880 PF02195 ParB-like nuclease domain GNY17_01900 PF01380 SIS domain GNY17_01915 PF17288 Terminase RNAseH like domain GNY17_01915 PF04466 Phage terminase large subunit GNY17_02115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GNY17_02115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GNY17_02120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GNY17_02125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNY17_02125 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNY17_02155 PF00158 Sigma-54 interaction domain GNY17_02155 PF02954 Bacterial regulatory protein, Fis family GNY17_02155 PF01590 GAF domain GNY17_02160 PF00171 Aldehyde dehydrogenase family GNY17_02180 PF12833 Helix-turn-helix domain GNY17_02200 PF16697 Inner membrane component of T3SS, cytoplasmic domain GNY17_02200 PF16693 Inner membrane component of T3SS, periplasmic domain GNY17_02210 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GNY17_02215 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) GNY17_02225 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI GNY17_02230 PF01514 Secretory protein of YscJ/FliF family GNY17_02240 PF02108 Flagellar assembly protein FliH GNY17_02260 PF13693 Winged helix-turn-helix DNA-binding GNY17_02325 PF02810 SEC-C motif GNY17_02485 PF01555 DNA methylase GNY17_02550 PF12146 Serine aminopeptidase, S33 GNY17_02555 PF12146 Serine aminopeptidase, S33 GNY17_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_02560 PF03466 LysR substrate binding domain GNY17_02565 PF01312 FlhB HrpN YscU SpaS Family GNY17_02570 PF01311 Bacterial export proteins, family 1 GNY17_02575 PF01313 Bacterial export proteins, family 3 GNY17_02580 PF00813 FliP family GNY17_02585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNY17_02600 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNY17_02600 PF18269 T3SS EscN ATPase C-terminal domain GNY17_02600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_02605 PF07201 HrpJ-like domain GNY17_02610 PF09059 TyeA GNY17_02630 PF00771 FHIPEP family GNY17_02635 PF09621 Type III secretion system regulator (LcrR) GNY17_02640 PF07216 LcrG protein GNY17_02645 PF04792 V antigen (LcrV) protein GNY17_02650 PF07720 Tetratricopeptide repeat GNY17_02660 PF05844 YopD protein GNY17_02670 PF01925 Sulfite exporter TauE/SafE GNY17_02675 PF01970 Tripartite tricarboxylate transporter TctA family GNY17_02705 PF00285 Citrate synthase, C-terminal domain GNY17_02710 PF00330 Aconitase family (aconitate hydratase) GNY17_02710 PF00694 Aconitase C-terminal domain GNY17_02715 PF04303 PrpF protein GNY17_02720 PF00501 AMP-binding enzyme GNY17_02720 PF16177 Acetyl-coenzyme A synthetase N-terminus GNY17_02720 PF13193 AMP-binding enzyme C-terminal domain GNY17_02730 PF00089 Trypsin GNY17_02745 PF04055 Radical SAM superfamily GNY17_02750 PF06508 Queuosine biosynthesis protein QueC GNY17_02755 PF17158 Membrane-associated sensor, integral membrane domain GNY17_02755 PF00990 Diguanylate cyclase, GGDEF domain GNY17_02765 PF05736 OprF membrane domain GNY17_02765 PF00691 OmpA family GNY17_02780 PF00691 OmpA family GNY17_02780 PF05736 OprF membrane domain GNY17_02795 PF17785 PUA-like domain GNY17_02795 PF10672 S-adenosylmethionine-dependent methyltransferase GNY17_02800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_02800 PF00672 HAMP domain GNY17_02800 PF02743 Cache domain GNY17_02805 PF00708 Acylphosphatase GNY17_02810 PF04358 DsrC like protein GNY17_02820 PF01027 Inhibitor of apoptosis-promoting Bax1 GNY17_02825 PF00005 ABC transporter GNY17_02830 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_02835 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_02840 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_02845 PF10414 Sirohaem synthase dimerisation region GNY17_02845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNY17_02845 PF14824 Sirohaem biosynthesis protein central GNY17_02855 PF04461 Protein of unknown function (DUF520) GNY17_02860 PF00793 DAHP synthetase I family GNY17_02880 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GNY17_02880 PF01189 16S rRNA methyltransferase RsmB/F GNY17_02880 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GNY17_02885 PF02470 MlaD protein GNY17_02890 PF04403 Paraquat-inducible protein A GNY17_02895 PF00664 ABC transporter transmembrane region GNY17_02895 PF00005 ABC transporter GNY17_02900 PF13185 GAF domain GNY17_02905 PF04352 ProQ/FINO family GNY17_02905 PF17516 ProQ C-terminal domain GNY17_02910 PF00595 PDZ domain GNY17_02910 PF11818 C-terminal domain of tail specific protease (DUF3340) GNY17_02910 PF03572 Peptidase family S41 GNY17_02910 PF17804 Tail specific protease N-terminal domain GNY17_02920 PF11940 Domain of unknown function (DUF3458) Ig-like fold GNY17_02920 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GNY17_02920 PF01433 Peptidase family M1 domain GNY17_02930 PF05088 Bacterial NAD-glutamate dehydrogenase GNY17_02935 PF01180 Dihydroorotate dehydrogenase GNY17_02940 PF07126 Cell-division protein ZapC GNY17_02950 PF10672 S-adenosylmethionine-dependent methyltransferase GNY17_02950 PF02926 THUMP domain GNY17_02950 PF01170 Putative RNA methylase family UPF0020 GNY17_02970 PF04957 Ribosome modulation factor GNY17_02975 PF07977 FabA-like domain GNY17_02980 PF13654 AAA domain GNY17_02980 PF05362 Lon protease (S16) C-terminal proteolytic domain GNY17_02985 PF17414 MatP C-terminal ribbon-helix-helix domain GNY17_02985 PF06303 MatP N-terminal domain GNY17_03000 PF09308 LuxQ, periplasmic GNY17_03000 PF00072 Response regulator receiver domain GNY17_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_03000 PF00512 His Kinase A (phospho-acceptor) domain GNY17_03015 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNY17_03030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNY17_03030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GNY17_03040 PF00403 Heavy-metal-associated domain GNY17_03055 PF13545 Crp-like helix-turn-helix domain GNY17_03055 PF00027 Cyclic nucleotide-binding domain GNY17_03060 PF00582 Universal stress protein family GNY17_03070 PF01171 PP-loop family GNY17_03090 PF00005 ABC transporter GNY17_03090 PF08402 TOBE domain GNY17_03095 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_03100 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_03105 PF13416 Bacterial extracellular solute-binding protein GNY17_03110 PF13416 Bacterial extracellular solute-binding protein GNY17_03115 PF02146 Sir2 family GNY17_03125 PF00909 Ammonium Transporter Family GNY17_03150 PF13247 4Fe-4S dicluster domain GNY17_03155 PF01568 Molydopterin dinucleotide binding domain GNY17_03155 PF00384 Molybdopterin oxidoreductase GNY17_03155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_03165 PF02613 Nitrate reductase delta subunit GNY17_03190 PF02634 FdhD/NarQ family GNY17_03195 PF12848 ABC transporter GNY17_03195 PF00005 ABC transporter GNY17_03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_03205 PF00512 His Kinase A (phospho-acceptor) domain GNY17_03210 PF02954 Bacterial regulatory protein, Fis family GNY17_03210 PF00072 Response regulator receiver domain GNY17_03210 PF00158 Sigma-54 interaction domain GNY17_03220 PF12849 PBP superfamily domain GNY17_03225 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_03230 PF08402 TOBE domain GNY17_03230 PF00005 ABC transporter GNY17_03235 PF12804 MobA-like NTP transferase domain GNY17_03240 PF00994 Probable molybdopterin binding domain GNY17_03240 PF03453 MoeA N-terminal region (domain I and II) GNY17_03240 PF03454 MoeA C-terminal region (domain IV) GNY17_03250 PF00480 ROK family GNY17_03290 PF13426 PAS domain GNY17_03290 PF08447 PAS fold GNY17_03290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_03295 PF00877 NlpC/P60 family GNY17_03305 PF00990 Diguanylate cyclase, GGDEF domain GNY17_03305 PF05230 MASE2 domain GNY17_03310 PF00072 Response regulator receiver domain GNY17_03310 PF01339 CheB methylesterase GNY17_03325 PF00677 Lumazine binding domain GNY17_03330 PF01554 MatE GNY17_03340 PF14743 DNA ligase OB-like domain GNY17_03340 PF01068 ATP dependent DNA ligase domain GNY17_03345 PF01740 STAS domain GNY17_03355 PF02563 Polysaccharide biosynthesis/export protein GNY17_03355 PF10531 SLBB domain GNY17_03375 PF00158 Sigma-54 interaction domain GNY17_03375 PF00072 Response regulator receiver domain GNY17_03375 PF02954 Bacterial regulatory protein, Fis family GNY17_03385 PF00534 Glycosyl transferases group 1 GNY17_03385 PF13439 Glycosyltransferase Family 4 GNY17_03420 PF00534 Glycosyl transferases group 1 GNY17_03420 PF13439 Glycosyltransferase Family 4 GNY17_03425 PF00535 Glycosyl transferase family 2 GNY17_03430 PF02397 Bacterial sugar transferase GNY17_03440 PF02028 BCCT, betaine/carnitine/choline family transporter GNY17_03455 PF00271 Helicase conserved C-terminal domain GNY17_03455 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GNY17_03455 PF00270 DEAD/DEAH box helicase GNY17_03455 PF04408 Helicase associated domain (HA2) GNY17_03455 PF11898 Domain of unknown function (DUF3418) GNY17_03460 PF02525 Flavodoxin-like fold GNY17_03470 PF02613 Nitrate reductase delta subunit GNY17_03475 PF04976 DMSO reductase anchor subunit (DmsC) GNY17_03480 PF13247 4Fe-4S dicluster domain GNY17_03480 PF12800 4Fe-4S binding domain GNY17_03485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_03485 PF00384 Molybdopterin oxidoreductase GNY17_03485 PF01568 Molydopterin dinucleotide binding domain GNY17_03515 PF00990 Diguanylate cyclase, GGDEF domain GNY17_03515 PF17151 Periplasmic sensor domain GNY17_03525 PF00012 Hsp70 protein GNY17_03530 PF00012 Hsp70 protein GNY17_03560 PF00664 ABC transporter transmembrane region GNY17_03560 PF00005 ABC transporter GNY17_03565 PF00005 ABC transporter GNY17_03565 PF00664 ABC transporter transmembrane region GNY17_03590 PF03222 Tryptophan/tyrosine permease family GNY17_03595 PF00465 Iron-containing alcohol dehydrogenase GNY17_03605 PF01966 HD domain GNY17_03685 PF01037 Lrp/AsnC ligand binding domain GNY17_03720 PF00069 Protein kinase domain GNY17_03745 PF04717 Type VI secretion system, phage-baseplate injector GNY17_03750 PF05638 Type VI secretion system effector, Hcp GNY17_03755 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_03755 PF07724 AAA domain (Cdc48 subfamily) GNY17_03755 PF17871 AAA lid domain GNY17_03755 PF10431 C-terminal, D2-small domain, of ClpB protein GNY17_03760 PF02954 Bacterial regulatory protein, Fis family GNY17_03760 PF00158 Sigma-54 interaction domain GNY17_03760 PF00072 Response regulator receiver domain GNY17_03765 PF00691 OmpA family GNY17_03785 PF01476 LysM domain GNY17_03785 PF08525 Opacity-associated protein A N-terminal motif GNY17_03785 PF01551 Peptidase family M23 GNY17_03795 PF03741 Integral membrane protein TerC family GNY17_03805 PF04055 Radical SAM superfamily GNY17_03810 PF11230 Protein of unknown function (DUF3029) GNY17_03815 PF01810 LysE type translocator GNY17_03820 PF11871 Domain of unknown function (DUF3391) GNY17_03820 PF01966 HD domain GNY17_03825 PF00990 Diguanylate cyclase, GGDEF domain GNY17_03825 PF03707 Bacterial signalling protein N terminal repeat GNY17_03825 PF00563 EAL domain GNY17_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_03835 PF00512 His Kinase A (phospho-acceptor) domain GNY17_03835 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_03840 PF00939 Sodium:sulfate symporter transmembrane region GNY17_03855 PF00300 Histidine phosphatase superfamily (branch 1) GNY17_03875 PF03466 LysR substrate binding domain GNY17_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_03880 PF08543 Phosphomethylpyrimidine kinase GNY17_03895 PF13533 Biotin-lipoyl like GNY17_03940 PF14497 Glutathione S-transferase, C-terminal domain GNY17_03940 PF02798 Glutathione S-transferase, N-terminal domain GNY17_03950 PF04209 homogentisate 1,2-dioxygenase GNY17_03955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_03960 PF01546 Peptidase family M20/M25/M40 GNY17_03960 PF07687 Peptidase dimerisation domain GNY17_03965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_03970 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_03975 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_03975 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_03980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_03980 PF00005 ABC transporter GNY17_03985 PF00005 ABC transporter GNY17_03985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_04000 PF01752 Collagenase GNY17_04000 PF08453 Peptidase family M9 N-terminal GNY17_04010 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_04015 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_04020 PF00005 ABC transporter GNY17_04020 PF08402 TOBE domain GNY17_04025 PF00701 Dihydrodipicolinate synthetase family GNY17_04030 PF02423 Ornithine cyclodeaminase/mu-crystallin family GNY17_04050 PF05544 Proline racemase GNY17_04055 PF00171 Aldehyde dehydrogenase family GNY17_04060 PF00392 Bacterial regulatory proteins, gntR family GNY17_04080 PF05971 RNA methyltransferase GNY17_04085 PF01863 Protein of unknown function DUF45 GNY17_04095 PF03466 LysR substrate binding domain GNY17_04095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_04115 PF00005 ABC transporter GNY17_04120 PF01032 FecCD transport family GNY17_04125 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GNY17_04140 PF00300 Histidine phosphatase superfamily (branch 1) GNY17_04145 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GNY17_04150 PF02654 Cobalamin-5-phosphate synthase GNY17_04155 PF02277 Phosphoribosyltransferase GNY17_04160 PF13460 NAD(P)H-binding GNY17_04170 PF08411 Exonuclease C-terminal GNY17_04170 PF00929 Exonuclease GNY17_04175 PF03788 LrgA family GNY17_04180 PF04172 LrgB-like family GNY17_04185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNY17_04185 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GNY17_04190 PF02222 ATP-grasp domain GNY17_04195 PF05724 Thiopurine S-methyltransferase (TPMT) GNY17_04205 PF00216 Bacterial DNA-binding protein GNY17_04220 PF03483 B3/4 domain GNY17_04220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GNY17_04220 PF03147 Ferredoxin-fold anticodon binding domain GNY17_04220 PF01588 Putative tRNA binding domain GNY17_04220 PF03484 tRNA synthetase B5 domain GNY17_04225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GNY17_04225 PF01409 tRNA synthetases class II core domain (F) GNY17_04230 PF00990 Diguanylate cyclase, GGDEF domain GNY17_04230 PF17158 Membrane-associated sensor, integral membrane domain GNY17_04260 PF01906 Putative heavy-metal-binding GNY17_04265 PF00453 Ribosomal protein L20 GNY17_04270 PF01632 Ribosomal protein L35 GNY17_04275 PF00707 Translation initiation factor IF-3, C-terminal domain GNY17_04275 PF05198 Translation initiation factor IF-3, N-terminal domain GNY17_04280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNY17_04280 PF03129 Anticodon binding domain GNY17_04280 PF02824 TGS domain GNY17_04280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNY17_04295 PF07702 UTRA domain GNY17_04295 PF00392 Bacterial regulatory proteins, gntR family GNY17_04300 PF01979 Amidohydrolase family GNY17_04305 PF00491 Arginase family GNY17_04310 PF01175 Urocanase Rossmann-like domain GNY17_04310 PF17392 Urocanase C-terminal domain GNY17_04310 PF17391 Urocanase N-terminal domain GNY17_04315 PF00221 Aromatic amino acid lyase GNY17_04325 PF04191 Phospholipid methyltransferase GNY17_04330 PF13183 4Fe-4S dicluster domain GNY17_04330 PF01565 FAD binding domain GNY17_04330 PF02913 FAD linked oxidases, C-terminal domain GNY17_04345 PF00691 OmpA family GNY17_04345 PF05736 OprF membrane domain GNY17_04365 PF01259 SAICAR synthetase GNY17_04370 PF16655 PhoD-like phosphatase, N-terminal domain GNY17_04370 PF09423 PhoD-like phosphatase GNY17_04380 PF02253 Phospholipase A1 GNY17_04385 PF04408 Helicase associated domain (HA2) GNY17_04385 PF08482 ATP-dependent helicase C-terminal GNY17_04385 PF00270 DEAD/DEAH box helicase GNY17_04385 PF00271 Helicase conserved C-terminal domain GNY17_04390 PF03949 Malic enzyme, NAD binding domain GNY17_04390 PF00390 Malic enzyme, N-terminal domain GNY17_04395 PF02698 DUF218 domain GNY17_04400 PF00939 Sodium:sulfate symporter transmembrane region GNY17_04405 PF00990 Diguanylate cyclase, GGDEF domain GNY17_04405 PF00072 Response regulator receiver domain GNY17_04415 PF00266 Aminotransferase class-V GNY17_04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_04430 PF00005 ABC transporter GNY17_04430 PF00664 ABC transporter transmembrane region GNY17_04435 PF00005 ABC transporter GNY17_04435 PF00664 ABC transporter transmembrane region GNY17_04440 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_04445 PF00266 Aminotransferase class-V GNY17_04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_04455 PF00512 His Kinase A (phospho-acceptor) domain GNY17_04455 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_04470 PF04993 TfoX N-terminal domain GNY17_04470 PF04994 TfoX C-terminal domain GNY17_04485 PF03956 Lysine exporter LysO GNY17_04495 PF00282 Pyridoxal-dependent decarboxylase conserved domain GNY17_04500 PF01418 Helix-turn-helix domain, rpiR family GNY17_04500 PF01380 SIS domain GNY17_04505 PF00465 Iron-containing alcohol dehydrogenase GNY17_04515 PF00462 Glutaredoxin GNY17_04520 PF02080 TrkA-C domain GNY17_04520 PF06826 Predicted Permease Membrane Region GNY17_04525 PF07055 Enoyl reductase FAD binding domain GNY17_04525 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GNY17_04525 PF12241 Trans-2-enoyl-CoA reductase catalytic region GNY17_04530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNY17_04530 PF09317 Domain of unknown function (DUF1974) GNY17_04530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNY17_04530 PF02770 Acyl-CoA dehydrogenase, middle domain GNY17_04535 PF00440 Bacterial regulatory proteins, tetR family GNY17_04535 PF16295 Tetracyclin repressor-like, C-terminal domain GNY17_04540 PF06965 Na+/H+ antiporter 1 GNY17_04555 PF00005 ABC transporter GNY17_04560 PF01554 MatE GNY17_04565 PF13460 NAD(P)H-binding GNY17_04565 PF11066 Protein of unknown function (DUF2867) GNY17_04570 PF03264 NapC/NirT cytochrome c family, N-terminal region GNY17_04585 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) GNY17_04600 PF07690 Major Facilitator Superfamily GNY17_04605 PF01479 S4 domain GNY17_04605 PF00849 RNA pseudouridylate synthase GNY17_04610 PF00271 Helicase conserved C-terminal domain GNY17_04610 PF04851 Type III restriction enzyme, res subunit GNY17_04620 PF00072 Response regulator receiver domain GNY17_04620 PF00486 Transcriptional regulatory protein, C terminal GNY17_04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_04625 PF00512 His Kinase A (phospho-acceptor) domain GNY17_04625 PF00672 HAMP domain GNY17_04630 PF01386 Ribosomal L25p family GNY17_04645 PF02872 5'-nucleotidase, C-terminal domain GNY17_04645 PF00149 Calcineurin-like phosphoesterase GNY17_04660 PF06945 Protein of unknown function (DUF1289) GNY17_04670 PF00196 Bacterial regulatory proteins, luxR family GNY17_04670 PF00072 Response regulator receiver domain GNY17_04675 PF00512 His Kinase A (phospho-acceptor) domain GNY17_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_04685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNY17_04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_04695 PF09335 SNARE associated Golgi protein GNY17_04700 PF13416 Bacterial extracellular solute-binding protein GNY17_04705 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_04710 PF00005 ABC transporter GNY17_04715 PF01066 CDP-alcohol phosphatidyltransferase GNY17_04730 PF00158 Sigma-54 interaction domain GNY17_04730 PF01590 GAF domain GNY17_04735 PF03063 Prismane/CO dehydrogenase family GNY17_04740 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_04740 PF00175 Oxidoreductase NAD-binding domain GNY17_04740 PF00970 Oxidoreductase FAD-binding domain GNY17_04750 PF00849 RNA pseudouridylate synthase GNY17_04755 PF12729 Four helix bundle sensory module for signal transduction GNY17_04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_04755 PF00672 HAMP domain GNY17_04760 PF00209 Sodium:neurotransmitter symporter family GNY17_04765 PF13396 Phospholipase_D-nuclease N-terminal GNY17_04765 PF13091 PLD-like domain GNY17_04770 PF01053 Cys/Met metabolism PLP-dependent enzyme GNY17_04775 PF00561 alpha/beta hydrolase fold GNY17_04780 PF03280 Proteobacterial lipase chaperone protein GNY17_04785 PF03352 Methyladenine glycosylase GNY17_04790 PF00873 AcrB/AcrD/AcrF family GNY17_04795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_04800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_04805 PF04024 PspC domain GNY17_04810 PF06667 Phage shock protein B GNY17_04815 PF04012 PspA/IM30 family GNY17_04820 PF00158 Sigma-54 interaction domain GNY17_04820 PF02954 Bacterial regulatory protein, Fis family GNY17_04825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_04830 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_04835 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_04835 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_04840 PF00005 ABC transporter GNY17_04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_04845 PF00005 ABC transporter GNY17_04855 PF01368 DHH family GNY17_04855 PF02833 DHHA2 domain GNY17_04865 PF16874 Glycosyl hydrolase family 36 C-terminal domain GNY17_04865 PF16875 Glycosyl hydrolase family 36 N-terminal domain GNY17_04870 PF18364 Molybdopterin oxidoreductase N-terminal domain GNY17_04870 PF00384 Molybdopterin oxidoreductase GNY17_04870 PF01568 Molydopterin dinucleotide binding domain GNY17_04875 PF03264 NapC/NirT cytochrome c family, N-terminal region GNY17_04880 PF06796 Periplasmic nitrate reductase protein NapE GNY17_04885 PF03649 Uncharacterised protein family (UPF0014) GNY17_04895 PF01226 Formate/nitrite transporter GNY17_04920 PF02698 DUF218 domain GNY17_04925 PF00265 Thymidine kinase GNY17_04930 PF01406 tRNA synthetases class I (C) catalytic domain GNY17_04930 PF09190 DALR domain GNY17_04935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNY17_04940 PF00149 Calcineurin-like phosphoesterase GNY17_04945 PF00563 EAL domain GNY17_04945 PF08668 HDOD domain GNY17_04955 PF02810 SEC-C motif GNY17_04960 PF01502 Phosphoribosyl-AMP cyclohydrolase GNY17_04960 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GNY17_04965 PF00977 Histidine biosynthesis protein GNY17_04970 PF00977 Histidine biosynthesis protein GNY17_04975 PF00117 Glutamine amidotransferase class-I GNY17_04980 PF08645 Polynucleotide kinase 3 phosphatase GNY17_04980 PF00475 Imidazoleglycerol-phosphate dehydratase GNY17_04985 PF00155 Aminotransferase class I and II GNY17_04990 PF00815 Histidinol dehydrogenase GNY17_04995 PF01634 ATP phosphoribosyltransferase GNY17_04995 PF08029 HisG, C-terminal domain GNY17_05000 PF02954 Bacterial regulatory protein, Fis family GNY17_05000 PF00072 Response regulator receiver domain GNY17_05000 PF00158 Sigma-54 interaction domain GNY17_05010 PF03553 Na+/H+ antiporter family GNY17_05015 PF00816 H-NS histone family GNY17_05020 PF00294 pfkB family carbohydrate kinase GNY17_05035 PF04356 Protein of unknown function (DUF489) GNY17_05040 PF08328 Adenylosuccinate lyase C-terminal GNY17_05040 PF00206 Lyase GNY17_05080 PF00106 short chain dehydrogenase GNY17_05090 PF01435 Peptidase family M48 GNY17_05105 PF08241 Methyltransferase domain GNY17_05110 PF00155 Aminotransferase class I and II GNY17_05115 PF04055 Radical SAM superfamily GNY17_05115 PF06968 Biotin and Thiamin Synthesis associated domain GNY17_05120 PF00202 Aminotransferase class-III GNY17_05125 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNY17_05140 PF02403 Seryl-tRNA synthetase N-terminal domain GNY17_05140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNY17_05145 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_05145 PF12002 MgsA AAA+ ATPase C terminal GNY17_05145 PF16193 AAA C-terminal domain GNY17_05150 PF03548 Outer membrane lipoprotein carrier protein LolA GNY17_05155 PF01580 FtsK/SpoIIIE family GNY17_05155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GNY17_05155 PF09397 Ftsk gamma domain GNY17_05155 PF17854 FtsK alpha domain GNY17_05160 PF01037 Lrp/AsnC ligand binding domain GNY17_05165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNY17_05165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNY17_05175 PF03466 LysR substrate binding domain GNY17_05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_05190 PF00005 ABC transporter GNY17_05195 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GNY17_05210 PF00579 tRNA synthetases class I (W and Y) GNY17_05230 PF00873 AcrB/AcrD/AcrF family GNY17_05235 PF00529 HlyD membrane-fusion protein of T1SS GNY17_05235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_05250 PF00672 HAMP domain GNY17_05250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_05250 PF12729 Four helix bundle sensory module for signal transduction GNY17_05260 PF00239 Resolvase, N terminal domain GNY17_05260 PF02796 Helix-turn-helix domain of resolvase GNY17_05320 PF06610 L-alanine exporter GNY17_05325 PF00512 His Kinase A (phospho-acceptor) domain GNY17_05325 PF09308 LuxQ, periplasmic GNY17_05325 PF00072 Response regulator receiver domain GNY17_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_05335 PF03738 Glutathionylspermidine synthase preATP-grasp GNY17_05355 PF02445 Quinolinate synthetase A protein GNY17_05360 PF16331 TolA binding protein trimerisation GNY17_05360 PF13174 Tetratricopeptide repeat GNY17_05365 PF00691 OmpA family GNY17_05370 PF04052 TolB amino-terminal domain GNY17_05370 PF07676 WD40-like Beta Propeller Repeat GNY17_05380 PF02472 Biopolymer transport protein ExbD/TolR GNY17_05385 PF01618 MotA/TolQ/ExbB proton channel family GNY17_05390 PF03061 Thioesterase superfamily GNY17_05400 PF08173 Membrane bound YbgT-like protein GNY17_05405 PF02322 Cytochrome bd terminal oxidase subunit II GNY17_05410 PF01654 Cytochrome bd terminal oxidase subunit I GNY17_05415 PF17864 RuvB AAA lid domain GNY17_05415 PF05491 RuvB C-terminal winged helix domain GNY17_05415 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNY17_05420 PF07499 RuvA, C-terminal domain GNY17_05420 PF01330 RuvA N terminal domain GNY17_05425 PF00672 HAMP domain GNY17_05425 PF02203 Tar ligand binding domain homologue GNY17_05425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_05430 PF02075 Crossover junction endodeoxyribonuclease RuvC GNY17_05435 PF01336 OB-fold nucleic acid binding domain GNY17_05435 PF00152 tRNA synthetases class II (D, K and N) GNY17_05435 PF02938 GAD domain GNY17_05440 PF01904 Protein of unknown function DUF72 GNY17_05445 PF13649 Methyltransferase domain GNY17_05450 PF08003 Protein of unknown function (DUF1698) GNY17_05460 PF18030 RimK PreATP-grasp domain GNY17_05460 PF08443 RimK-like ATP-grasp domain GNY17_05470 PF08443 RimK-like ATP-grasp domain GNY17_05470 PF18030 RimK PreATP-grasp domain GNY17_05480 PF16330 MukB hinge domain GNY17_05480 PF04310 MukB N-terminal GNY17_05485 PF04288 MukE-like family GNY17_05490 PF17192 MukF middle domain GNY17_05490 PF17193 MukF C-terminal domain GNY17_05490 PF03882 MukF winged-helix domain GNY17_05500 PF02698 DUF218 domain GNY17_05505 PF00072 Response regulator receiver domain GNY17_05505 PF00486 Transcriptional regulatory protein, C terminal GNY17_05510 PF02613 Nitrate reductase delta subunit GNY17_05515 PF00356 Bacterial regulatory proteins, lacI family GNY17_05520 PF04994 TfoX C-terminal domain GNY17_05520 PF04993 TfoX N-terminal domain GNY17_05540 PF00534 Glycosyl transferases group 1 GNY17_05540 PF08323 Starch synthase catalytic domain GNY17_05545 PF00483 Nucleotidyl transferase GNY17_05550 PF01396 Topoisomerase DNA binding C4 zinc finger GNY17_05550 PF01751 Toprim domain GNY17_05550 PF01131 DNA topoisomerase GNY17_05550 PF08272 Topoisomerase I zinc-ribbon-like GNY17_05555 PF10692 Protein of unknown function (DUF2498) GNY17_05560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNY17_05570 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GNY17_05575 PF04376 Arginine-tRNA-protein transferase, N terminus GNY17_05575 PF04377 Arginine-tRNA-protein transferase, C terminus GNY17_05580 PF01176 Translation initiation factor 1A / IF-1 GNY17_05590 PF02861 Clp amino terminal domain, pathogenicity island component GNY17_05590 PF17871 AAA lid domain GNY17_05590 PF07724 AAA domain (Cdc48 subfamily) GNY17_05590 PF10431 C-terminal, D2-small domain, of ClpB protein GNY17_05590 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_05595 PF02617 ATP-dependent Clp protease adaptor protein ClpS GNY17_05600 PF00313 'Cold-shock' DNA-binding domain GNY17_05605 PF03971 Monomeric isocitrate dehydrogenase GNY17_05610 PF00849 RNA pseudouridylate synthase GNY17_05615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GNY17_05625 PF06733 DEAD_2 GNY17_05625 PF13307 Helicase C-terminal domain GNY17_05630 PF01925 Sulfite exporter TauE/SafE GNY17_05635 PF07445 Primosomal replication protein priC GNY17_05640 PF10689 Protein of unknown function (DUF2496) GNY17_05645 PF03372 Endonuclease/Exonuclease/phosphatase family GNY17_05655 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_05660 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_05665 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_05670 PF00005 ABC transporter GNY17_05690 PF02901 Pyruvate formate lyase-like GNY17_05690 PF01228 Glycine radical GNY17_05700 PF04055 Radical SAM superfamily GNY17_05710 PF03887 YfbU domain GNY17_05720 PF06798 PrkA serine protein kinase C-terminal domain GNY17_05720 PF08298 PrkA AAA domain GNY17_05725 PF04285 Protein of unknown function (DUF444) GNY17_05730 PF04293 SpoVR like protein GNY17_05735 PF02348 Cytidylyltransferase GNY17_05740 PF03966 Trm112p-like protein GNY17_05745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GNY17_05750 PF00005 ABC transporter GNY17_05750 PF00664 ABC transporter transmembrane region GNY17_05755 PF03772 Competence protein GNY17_05755 PF00753 Metallo-beta-lactamase superfamily GNY17_05755 PF13567 Domain of unknown function (DUF4131) GNY17_05765 PF12704 MacB-like periplasmic core domain GNY17_05765 PF02687 FtsX-like permease family GNY17_05770 PF00005 ABC transporter GNY17_05775 PF12704 MacB-like periplasmic core domain GNY17_05775 PF02687 FtsX-like permease family GNY17_05785 PF03461 TRCF domain GNY17_05785 PF17757 UvrB interaction domain GNY17_05785 PF00271 Helicase conserved C-terminal domain GNY17_05785 PF00270 DEAD/DEAH box helicase GNY17_05785 PF02559 CarD-like/TRCF domain GNY17_05800 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_05810 PF05728 Uncharacterised protein family (UPF0227) GNY17_05820 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GNY17_05820 PF13036 Peptidoglycan-synthase activator LpoB GNY17_05835 PF01230 HIT domain GNY17_05840 PF00672 HAMP domain GNY17_05840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_05855 PF01048 Phosphorylase superfamily GNY17_05860 PF00403 Heavy-metal-associated domain GNY17_05865 PF00478 IMP dehydrogenase / GMP reductase domain GNY17_05865 PF00571 CBS domain GNY17_05880 PF00037 4Fe-4S binding domain GNY17_05880 PF11953 Domain of unknown function (DUF3470) GNY17_05885 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNY17_05885 PF00588 SpoU rRNA Methylase family GNY17_05940 PF02796 Helix-turn-helix domain of resolvase GNY17_05940 PF00239 Resolvase, N terminal domain GNY17_05945 PF01381 Helix-turn-helix GNY17_06005 PF00990 Diguanylate cyclase, GGDEF domain GNY17_06005 PF17152 Periplasmic sensor domain GNY17_06015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNY17_06020 PF09619 Type III secretion system lipoprotein chaperone (YscW) GNY17_06035 PF13404 AsnC-type helix-turn-helix domain GNY17_06035 PF01037 Lrp/AsnC ligand binding domain GNY17_06040 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_06065 PF00873 AcrB/AcrD/AcrF family GNY17_06070 PF13533 Biotin-lipoyl like GNY17_06115 PF07690 Major Facilitator Superfamily GNY17_06120 PF03601 Conserved hypothetical protein 698 GNY17_06130 PF00501 AMP-binding enzyme GNY17_06130 PF13193 AMP-binding enzyme C-terminal domain GNY17_06135 PF13378 Enolase C-terminal domain-like GNY17_06140 PF00378 Enoyl-CoA hydratase/isomerase GNY17_06145 PF12697 Alpha/beta hydrolase family GNY17_06150 PF16582 Middle domain of thiamine pyrophosphate GNY17_06150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNY17_06150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNY17_06155 PF00425 chorismate binding enzyme GNY17_06160 PF00155 Aminotransferase class I and II GNY17_06170 PF13286 Phosphohydrolase-associated domain GNY17_06170 PF01966 HD domain GNY17_06190 PF13145 PPIC-type PPIASE domain GNY17_06195 PF00216 Bacterial DNA-binding protein GNY17_06200 PF02190 ATP-dependent protease La (LON) substrate-binding domain GNY17_06200 PF05362 Lon protease (S16) C-terminal proteolytic domain GNY17_06200 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_06205 PF06689 ClpX C4-type zinc finger GNY17_06205 PF07724 AAA domain (Cdc48 subfamily) GNY17_06205 PF10431 C-terminal, D2-small domain, of ClpB protein GNY17_06210 PF00574 Clp protease GNY17_06215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_06215 PF05698 Bacterial trigger factor protein (TF) C-terminus GNY17_06215 PF05697 Bacterial trigger factor protein (TF) GNY17_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_06220 PF00512 His Kinase A (phospho-acceptor) domain GNY17_06220 PF02743 Cache domain GNY17_06225 PF00072 Response regulator receiver domain GNY17_06225 PF00158 Sigma-54 interaction domain GNY17_06225 PF02954 Bacterial regulatory protein, Fis family GNY17_06235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNY17_06240 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNY17_06245 PF03480 Bacterial extracellular solute-binding protein, family 7 GNY17_06250 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GNY17_06270 PF02386 Cation transport protein GNY17_06275 PF02080 TrkA-C domain GNY17_06275 PF02254 TrkA-N domain GNY17_06280 PF00270 DEAD/DEAH box helicase GNY17_06280 PF00271 Helicase conserved C-terminal domain GNY17_06285 PF00571 CBS domain GNY17_06285 PF01595 Cyclin M transmembrane N-terminal domain GNY17_06285 PF03471 Transporter associated domain GNY17_06295 PF04820 Tryptophan halogenase GNY17_06320 PF00550 Phosphopantetheine attachment site GNY17_06325 PF00550 Phosphopantetheine attachment site GNY17_06340 PF07977 FabA-like domain GNY17_06345 PF00535 Glycosyl transferase family 2 GNY17_06350 PF00221 Aromatic amino acid lyase GNY17_06375 PF00109 Beta-ketoacyl synthase, N-terminal domain GNY17_06375 PF02801 Beta-ketoacyl synthase, C-terminal domain GNY17_06380 PF07977 FabA-like domain GNY17_06390 PF00109 Beta-ketoacyl synthase, N-terminal domain GNY17_06390 PF02801 Beta-ketoacyl synthase, C-terminal domain GNY17_06405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GNY17_06405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GNY17_06410 PF07662 Na+ dependent nucleoside transporter C-terminus GNY17_06410 PF07670 Nucleoside recognition GNY17_06410 PF01773 Na+ dependent nucleoside transporter N-terminus GNY17_06415 PF03466 LysR substrate binding domain GNY17_06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_06420 PF13406 Transglycosylase SLT domain GNY17_06425 PF05166 YcgL domain GNY17_06430 PF05209 Septum formation inhibitor MinC, N-terminal domain GNY17_06430 PF03775 Septum formation inhibitor MinC, C-terminal domain GNY17_06435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GNY17_06440 PF03776 Septum formation topological specificity factor MinE GNY17_06445 PF01612 3'-5' exonuclease GNY17_06445 PF00570 HRDC domain GNY17_06450 PF00501 AMP-binding enzyme GNY17_06450 PF13193 AMP-binding enzyme C-terminal domain GNY17_06455 PF00561 alpha/beta hydrolase fold GNY17_06470 PF00814 Glycoprotease family GNY17_06475 PF04851 Type III restriction enzyme, res subunit GNY17_06475 PF13307 Helicase C-terminal domain GNY17_06480 PF00551 Formyl transferase GNY17_06480 PF01842 ACT domain GNY17_06485 PF06185 YecM protein GNY17_06495 PF00750 tRNA synthetases class I (R) GNY17_06495 PF03485 Arginyl tRNA synthetase N terminal domain GNY17_06495 PF05746 DALR anticodon binding domain GNY17_06510 PF07664 Ferrous iron transport protein B C terminus GNY17_06510 PF07670 Nucleoside recognition GNY17_06510 PF02421 Ferrous iron transport protein B GNY17_06510 PF17910 FeoB cytosolic helical domain GNY17_06515 PF04023 FeoA domain GNY17_06530 PF02311 AraC-like ligand binding domain GNY17_06530 PF12833 Helix-turn-helix domain GNY17_06535 PF01297 Zinc-uptake complex component A periplasmic GNY17_06540 PF00005 ABC transporter GNY17_06545 PF00950 ABC 3 transport family GNY17_06550 PF02629 CoA binding domain GNY17_06550 PF00549 CoA-ligase GNY17_06555 PF08442 ATP-grasp domain GNY17_06555 PF00549 CoA-ligase GNY17_06560 PF00364 Biotin-requiring enzyme GNY17_06560 PF02817 e3 binding domain GNY17_06560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNY17_06565 PF00676 Dehydrogenase E1 component GNY17_06565 PF02779 Transketolase, pyrimidine binding domain GNY17_06565 PF16078 2-oxoglutarate dehydrogenase N-terminus GNY17_06565 PF16870 2-oxoglutarate dehydrogenase C-terminal GNY17_06570 PF13085 2Fe-2S iron-sulfur cluster binding domain GNY17_06575 PF00890 FAD binding domain GNY17_06575 PF02910 Fumarate reductase flavoprotein C-term GNY17_06580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GNY17_06585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GNY17_06590 PF00285 Citrate synthase, C-terminal domain GNY17_06595 PF01784 NIF3 (NGG1p interacting factor 3) GNY17_06605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNY17_06605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNY17_06605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNY17_06605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNY17_06610 PF17206 SeqA protein N-terminal domain GNY17_06610 PF03925 SeqA protein C-terminal domain GNY17_06615 PF00561 alpha/beta hydrolase fold GNY17_06625 PF00258 Flavodoxin GNY17_06635 PF01475 Ferric uptake regulator family GNY17_06640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GNY17_06640 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNY17_06645 PF00367 phosphotransferase system, EIIB GNY17_06645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNY17_06645 PF02378 Phosphotransferase system, EIIC GNY17_06655 PF01979 Amidohydrolase family GNY17_06660 PF00480 ROK family GNY17_06660 PF01047 MarR family GNY17_06665 PF02254 TrkA-N domain GNY17_06665 PF00999 Sodium/hydrogen exchanger family GNY17_06670 PF13537 Glutamine amidotransferase domain GNY17_06670 PF00733 Asparagine synthase GNY17_06675 PF02357 Transcription termination factor nusG GNY17_06680 PF00854 POT family GNY17_06685 PF00762 Ferrochelatase GNY17_06690 PF05191 Adenylate kinase, active site lid GNY17_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_06695 PF00183 Hsp90 protein GNY17_06700 PF00486 Transcriptional regulatory protein, C terminal GNY17_06705 PF17323 Trans-membrane regulatory protein ToxS GNY17_06720 PF12850 Calcineurin-like phosphoesterase superfamily domain GNY17_06740 PF07556 Protein of unknown function (DUF1538) GNY17_06745 PF07556 Protein of unknown function (DUF1538) GNY17_06750 PF08338 Domain of unknown function (DUF1731) GNY17_06750 PF01370 NAD dependent epimerase/dehydratase family GNY17_06755 PF00106 short chain dehydrogenase GNY17_06765 PF00085 Thioredoxin GNY17_06770 PF16200 C-terminal region of band_7 GNY17_06770 PF01145 SPFH domain / Band 7 family GNY17_06785 PF03573 outer membrane porin, OprD family GNY17_06795 PF00533 BRCA1 C Terminus (BRCT) domain GNY17_06795 PF12826 Helix-hairpin-helix motif GNY17_06795 PF01653 NAD-dependent DNA ligase adenylation domain GNY17_06795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GNY17_06795 PF03120 NAD-dependent DNA ligase OB-fold domain GNY17_06800 PF04354 ZipA, C-terminal FtsZ-binding domain GNY17_06810 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_06820 PF00381 PTS HPr component phosphorylation site GNY17_06825 PF00391 PEP-utilising enzyme, mobile domain GNY17_06825 PF02896 PEP-utilising enzyme, TIM barrel domain GNY17_06825 PF05524 PEP-utilising enzyme, N-terminal GNY17_06830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNY17_06840 PF00700 Bacterial flagellin C-terminal helical region GNY17_06840 PF00669 Bacterial flagellin N-terminal helical region GNY17_06840 PF07196 Flagellin hook IN motif GNY17_06845 PF00700 Bacterial flagellin C-terminal helical region GNY17_06845 PF00669 Bacterial flagellin N-terminal helical region GNY17_06845 PF07196 Flagellin hook IN motif GNY17_06855 PF00669 Bacterial flagellin N-terminal helical region GNY17_06855 PF00700 Bacterial flagellin C-terminal helical region GNY17_06855 PF07196 Flagellin hook IN motif GNY17_06865 PF00669 Bacterial flagellin N-terminal helical region GNY17_06870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_06870 PF07196 Flagellin hook IN motif GNY17_06875 PF10135 Rod binding protein GNY17_06875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GNY17_06880 PF02119 Flagellar P-ring protein GNY17_06885 PF02107 Flagellar L-ring protein GNY17_06890 PF00460 Flagella basal body rod protein GNY17_06890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_06895 PF00460 Flagella basal body rod protein GNY17_06895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_06905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_06905 PF00460 Flagella basal body rod protein GNY17_06905 PF07559 Flagellar basal body protein FlaE GNY17_06910 PF13860 FlgD Ig-like domain GNY17_06910 PF13861 FlgD Tudor-like domain GNY17_06910 PF03963 Flagellar hook capping protein - N-terminal region GNY17_06915 PF00460 Flagella basal body rod protein GNY17_06915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_06920 PF00460 Flagella basal body rod protein GNY17_06925 PF01739 CheR methyltransferase, SAM binding domain GNY17_06925 PF03705 CheR methyltransferase, all-alpha domain GNY17_06930 PF01584 CheW-like domain GNY17_06930 PF00072 Response regulator receiver domain GNY17_06980 PF01389 OmpA-like transmembrane domain GNY17_06980 PF00691 OmpA family GNY17_06990 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNY17_06995 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GNY17_07000 PF13609 Gram-negative porin GNY17_07010 PF00403 Heavy-metal-associated domain GNY17_07025 PF02838 Glycosyl hydrolase family 20, domain 2 GNY17_07025 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GNY17_07025 PF03173 Putative carbohydrate binding domain GNY17_07025 PF00728 Glycosyl hydrolase family 20, catalytic domain GNY17_07050 PF01713 Smr domain GNY17_07055 PF00849 RNA pseudouridylate synthase GNY17_07055 PF01479 S4 domain GNY17_07060 PF04073 Aminoacyl-tRNA editing domain GNY17_07065 PF00149 Calcineurin-like phosphoesterase GNY17_07065 PF02872 5'-nucleotidase, C-terminal domain GNY17_07070 PF00793 DAHP synthetase I family GNY17_07075 PF13369 Transglutaminase-like superfamily GNY17_07080 PF04247 Invasion gene expression up-regulator, SirB GNY17_07085 PF17827 PrmC N-terminal domain GNY17_07085 PF13847 Methyltransferase domain GNY17_07090 PF00472 RF-1 domain GNY17_07090 PF03462 PCRF domain GNY17_07095 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GNY17_07095 PF01488 Shikimate / quinate 5-dehydrogenase GNY17_07095 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GNY17_07100 PF03550 Outer membrane lipoprotein LolB GNY17_07105 PF08544 GHMP kinases C terminal GNY17_07105 PF00288 GHMP kinases N terminal domain GNY17_07110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GNY17_07110 PF14572 Phosphoribosyl synthetase-associated domain GNY17_07115 PF01195 Peptidyl-tRNA hydrolase GNY17_07120 PF01926 50S ribosome-binding GTPase GNY17_07120 PF06071 Protein of unknown function (DUF933) GNY17_07235 PF01494 FAD binding domain GNY17_07245 PF00919 Uncharacterized protein family UPF0004 GNY17_07245 PF01938 TRAM domain GNY17_07245 PF04055 Radical SAM superfamily GNY17_07250 PF02562 PhoH-like protein GNY17_07255 PF02130 Uncharacterized protein family UPF0054 GNY17_07260 PF03471 Transporter associated domain GNY17_07260 PF00571 CBS domain GNY17_07265 PF00795 Carbon-nitrogen hydrolase GNY17_07270 PF07295 Zinc-ribbon containing domain GNY17_07275 PF13603 Leucyl-tRNA synthetase, Domain 2 GNY17_07275 PF08264 Anticodon-binding domain of tRNA GNY17_07275 PF00133 tRNA synthetases class I (I, L, M and V) GNY17_07280 PF04390 Lipopolysaccharide-assembly GNY17_07285 PF06144 DNA polymerase III, delta subunit GNY17_07285 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GNY17_07295 PF02590 Predicted SPOUT methyltransferase GNY17_07300 PF03717 Penicillin-binding Protein dimerisation domain GNY17_07300 PF00905 Penicillin binding protein transpeptidase domain GNY17_07305 PF01098 Cell cycle protein GNY17_07310 PF05036 Sporulation related domain GNY17_07310 PF03330 Lytic transglycolase GNY17_07315 PF07943 Penicillin-binding protein 5, C-terminal domain GNY17_07315 PF00768 D-alanyl-D-alanine carboxypeptidase GNY17_07320 PF04359 Protein of unknown function (DUF493) GNY17_07325 PF03099 Biotin/lipoate A/B protein ligase family GNY17_07330 PF04055 Radical SAM superfamily GNY17_07330 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GNY17_07335 PF00464 Serine hydroxymethyltransferase GNY17_07340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNY17_07340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNY17_07355 PF00128 Alpha amylase, catalytic domain GNY17_07355 PF16657 Maltogenic Amylase, C-terminal domain GNY17_07360 PF02378 Phosphotransferase system, EIIC GNY17_07360 PF00367 phosphotransferase system, EIIB GNY17_07365 PF00356 Bacterial regulatory proteins, lacI family GNY17_07380 PF09383 NIL domain GNY17_07380 PF00005 ABC transporter GNY17_07385 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_07390 PF03180 NLPA lipoprotein GNY17_07395 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GNY17_07400 PF07348 Syd protein (SUKH-2) GNY17_07405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GNY17_07405 PF14489 QueF-like protein GNY17_07415 PF00072 Response regulator receiver domain GNY17_07415 PF00990 Diguanylate cyclase, GGDEF domain GNY17_07420 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GNY17_07420 PF11892 Domain of unknown function (DUF3412) GNY17_07420 PF03641 Possible lysine decarboxylase GNY17_07425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNY17_07425 PF01367 5'-3' exonuclease, C-terminal SAM fold GNY17_07430 PF01223 DNA/RNA non-specific endonuclease GNY17_07435 PF18125 RlmM ferredoxin-like domain GNY17_07435 PF01728 FtsJ-like methyltransferase GNY17_07440 PF04241 Protein of unknown function (DUF423) GNY17_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_07450 PF03466 LysR substrate binding domain GNY17_07455 PF02568 Thiamine biosynthesis protein (ThiI) GNY17_07455 PF02926 THUMP domain GNY17_07460 PF00691 OmpA family GNY17_07465 PF01618 MotA/TolQ/ExbB proton channel family GNY17_07470 PF02609 Exonuclease VII small subunit GNY17_07475 PF00348 Polyprenyl synthetase GNY17_07480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GNY17_07480 PF02780 Transketolase, C-terminal domain GNY17_07480 PF02779 Transketolase, pyrimidine binding domain GNY17_07485 PF04608 Phosphatidylglycerophosphatase A GNY17_07490 PF02769 AIR synthase related protein, C-terminal domain GNY17_07490 PF00586 AIR synthase related protein, N-terminal domain GNY17_07495 PF01029 NusB family GNY17_07500 PF00885 6,7-dimethyl-8-ribityllumazine synthase GNY17_07505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GNY17_07505 PF00925 GTP cyclohydrolase II GNY17_07510 PF00677 Lumazine binding domain GNY17_07515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNY17_07515 PF01872 RibD C-terminal domain GNY17_07520 PF03477 ATP cone domain GNY17_07525 PF00171 Aldehyde dehydrogenase family GNY17_07530 PF01472 PUA domain GNY17_07530 PF00696 Amino acid kinase family GNY17_07535 PF07417 Sigma factor-binding transcriptional regulator Crl GNY17_07545 PF00156 Phosphoribosyl transferase domain GNY17_07550 PF00860 Permease family GNY17_07555 PF01546 Peptidase family M20/M25/M40 GNY17_07555 PF07687 Peptidase dimerisation domain GNY17_07580 PF02769 AIR synthase related protein, C-terminal domain GNY17_07580 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GNY17_07580 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GNY17_07585 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_07585 PF01464 Transglycosylase SLT domain GNY17_07595 PF14437 MafB19-like deaminase GNY17_07600 PF03806 AbgT putative transporter family GNY17_07625 PF00114 Pilin (bacterial filament) GNY17_07625 PF07963 Prokaryotic N-terminal methylation motif GNY17_07630 PF07963 Prokaryotic N-terminal methylation motif GNY17_07630 PF00114 Pilin (bacterial filament) GNY17_07640 PF00684 DnaJ central domain GNY17_07640 PF00226 DnaJ domain GNY17_07640 PF01556 DnaJ C terminal domain GNY17_07645 PF00012 Hsp70 protein GNY17_07650 PF00375 Sodium:dicarboxylate symporter family GNY17_07655 PF01025 GrpE GNY17_07660 PF01513 ATP-NAD kinase GNY17_07670 PF02463 RecF/RecN/SMC N terminal domain GNY17_07675 PF04355 SmpA / OmlA family GNY17_07680 PF03658 RnfH family Ubiquitin GNY17_07685 PF03364 Polyketide cyclase / dehydrase and lipid transport GNY17_07690 PF01668 SmpB protein GNY17_07700 PF13356 Arm DNA-binding domain GNY17_07700 PF00589 Phage integrase family GNY17_07705 PF02384 N-6 DNA Methylase GNY17_07705 PF12161 HsdM N-terminal domain GNY17_07745 PF04717 Type VI secretion system, phage-baseplate injector GNY17_07765 PF13356 Arm DNA-binding domain GNY17_07765 PF14659 Phage integrase, N-terminal SAM-like domain GNY17_07765 PF00589 Phage integrase family GNY17_07790 PF02264 LamB porin GNY17_07795 PF02449 Beta-galactosidase GNY17_07795 PF08533 Beta-galactosidase C-terminal domain GNY17_07795 PF08532 Beta-galactosidase trimerisation domain GNY17_07800 PF07745 Glycosyl hydrolase family 53 GNY17_07805 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_07810 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_07815 PF13416 Bacterial extracellular solute-binding protein GNY17_07820 PF00005 ABC transporter GNY17_07820 PF17912 MalK OB fold domain GNY17_07830 PF07745 Glycosyl hydrolase family 53 GNY17_07835 PF13340 Putative transposase of IS4/5 family (DUF4096) GNY17_07890 PF04002 RadC-like JAB domain GNY17_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_07930 PF03466 LysR substrate binding domain GNY17_07935 PF00795 Carbon-nitrogen hydrolase GNY17_07935 PF00583 Acetyltransferase (GNAT) family GNY17_07955 PF00202 Aminotransferase class-III GNY17_07960 PF01053 Cys/Met metabolism PLP-dependent enzyme GNY17_07965 PF07969 Amidohydrolase family GNY17_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_07985 PF03466 LysR substrate binding domain GNY17_07990 PF01266 FAD dependent oxidoreductase GNY17_07995 PF01235 Sodium:alanine symporter family GNY17_08005 PF01184 GPR1/FUN34/yaaH family GNY17_08010 PF00704 Glycosyl hydrolases family 18 GNY17_08010 PF06483 Chitinase C GNY17_08015 PF03553 Na+/H+ antiporter family GNY17_08020 PF02540 NAD synthase GNY17_08020 PF00117 Glutamine amidotransferase class-I GNY17_08020 PF00958 GMP synthase C terminal domain GNY17_08025 PF00478 IMP dehydrogenase / GMP reductase domain GNY17_08025 PF00571 CBS domain GNY17_08030 PF02601 Exonuclease VII, large subunit GNY17_08030 PF13742 OB-fold nucleic acid binding domain GNY17_08045 PF01926 50S ribosome-binding GTPase GNY17_08045 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GNY17_08050 PF13360 PQQ-like domain GNY17_08055 PF09976 Tetratricopeptide repeat-like domain GNY17_08060 PF03129 Anticodon binding domain GNY17_08060 PF13393 Histidyl-tRNA synthetase GNY17_08065 PF04551 GcpE protein GNY17_08070 PF13464 Domain of unknown function (DUF4115) GNY17_08080 PF04055 Radical SAM superfamily GNY17_08085 PF00334 Nucleoside diphosphate kinase GNY17_08090 PF12404 Peptidase GNY17_08090 PF00883 Cytosol aminopeptidase family, catalytic domain GNY17_08095 PF04384 Iron-sulphur cluster assembly GNY17_08100 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_08105 PF00012 Hsp70 protein GNY17_08110 PF00226 DnaJ domain GNY17_08110 PF07743 HSCB C-terminal oligomerisation domain GNY17_08115 PF01521 Iron-sulphur cluster biosynthesis GNY17_08120 PF01592 NifU-like N terminal domain GNY17_08125 PF00266 Aminotransferase class-V GNY17_08130 PF02082 Transcriptional regulator GNY17_08135 PF00588 SpoU rRNA Methylase family GNY17_08140 PF00459 Inositol monophosphatase family GNY17_08150 PF02355 Protein export membrane protein GNY17_08150 PF07549 SecD/SecF GG Motif GNY17_08155 PF13721 SecD export protein N-terminal TM region GNY17_08155 PF07549 SecD/SecF GG Motif GNY17_08155 PF02355 Protein export membrane protein GNY17_08160 PF02699 Preprotein translocase subunit GNY17_08165 PF01702 Queuine tRNA-ribosyltransferase GNY17_08170 PF02547 Queuosine biosynthesis protein GNY17_08180 PF00571 CBS domain GNY17_08185 PF00463 Isocitrate lyase family GNY17_08190 PF01274 Malate synthase GNY17_08200 PF03466 LysR substrate binding domain GNY17_08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_08205 PF00578 AhpC/TSA family GNY17_08205 PF10417 C-terminal domain of 1-Cys peroxiredoxin GNY17_08210 PF03932 CutC family GNY17_08215 PF03976 Polyphosphate kinase 2 (PPK2) GNY17_08220 PF01895 PhoU domain GNY17_08225 PF00005 ABC transporter GNY17_08230 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_08235 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_08240 PF13090 Polyphosphate kinase C-terminal domain 2 GNY17_08240 PF17941 Polyphosphate kinase C-terminal domain 1 GNY17_08240 PF02503 Polyphosphate kinase middle domain GNY17_08240 PF13089 Polyphosphate kinase N-terminal domain GNY17_08245 PF02541 Ppx/GppA phosphatase family GNY17_08250 PF12849 PBP superfamily domain GNY17_08255 PF11808 Phosphate regulon sensor protein PhoR GNY17_08255 PF00989 PAS fold GNY17_08255 PF00512 His Kinase A (phospho-acceptor) domain GNY17_08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_08260 PF00072 Response regulator receiver domain GNY17_08260 PF00486 Transcriptional regulatory protein, C terminal GNY17_08265 PF04381 Putative exonuclease, RdgC GNY17_08275 PF00037 4Fe-4S binding domain GNY17_08285 PF03411 Penicillin-insensitive murein endopeptidase GNY17_08335 PF02861 Clp amino terminal domain, pathogenicity island component GNY17_08335 PF07724 AAA domain (Cdc48 subfamily) GNY17_08335 PF17871 AAA lid domain GNY17_08335 PF10431 C-terminal, D2-small domain, of ClpB protein GNY17_08335 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_08345 PF01479 S4 domain GNY17_08345 PF00849 RNA pseudouridylate synthase GNY17_08350 PF13525 Outer membrane lipoprotein GNY17_08355 PF01551 Peptidase family M23 GNY17_08355 PF01464 Transglycosylase SLT domain GNY17_08355 PF10145 Phage-related minor tail protein GNY17_08360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GNY17_08365 PF00800 Prephenate dehydratase GNY17_08365 PF01817 Chorismate mutase type II GNY17_08370 PF01931 Protein of unknown function DUF84 GNY17_08375 PF01371 Trp repressor protein GNY17_08380 PF14718 Soluble lytic murein transglycosylase L domain GNY17_08380 PF01464 Transglycosylase SLT domain GNY17_08385 PF12848 ABC transporter GNY17_08385 PF00005 ABC transporter GNY17_08395 PF07238 PilZ domain GNY17_08400 PF01551 Peptidase family M23 GNY17_08400 PF04225 Opacity-associated protein A LysM-like domain GNY17_08405 PF01817 Chorismate mutase type II GNY17_08405 PF02153 Prephenate dehydrogenase GNY17_08410 PF00793 DAHP synthetase I family GNY17_08415 PF00933 Glycosyl hydrolase family 3 N terminal domain GNY17_08420 PF03702 Anhydro-N-acetylmuramic acid kinase GNY17_08425 PF13580 SIS domain GNY17_08440 PF02554 Carbon starvation protein CstA GNY17_08445 PF06580 Histidine kinase GNY17_08445 PF07694 5TMR of 5TMR-LYT GNY17_08450 PF00072 Response regulator receiver domain GNY17_08450 PF04397 LytTr DNA-binding domain GNY17_08455 PF02401 LytB protein GNY17_08460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_08465 PF01252 Signal peptidase (SPase) II GNY17_08470 PF08264 Anticodon-binding domain of tRNA GNY17_08470 PF00133 tRNA synthetases class I (I, L, M and V) GNY17_08470 PF06827 Zinc finger found in FPG and IleRS GNY17_08475 PF06574 FAD synthetase GNY17_08475 PF01687 Riboflavin kinase GNY17_08480 PF03023 Lipid II flippase MurJ GNY17_08485 PF01649 Ribosomal protein S20 GNY17_08495 PF01022 Bacterial regulatory protein, arsR family GNY17_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_08505 PF03466 LysR substrate binding domain GNY17_08510 PF02690 Na+/Pi-cotransporter GNY17_08520 PF00303 Thymidylate synthase GNY17_08525 PF01790 Prolipoprotein diacylglyceryl transferase GNY17_08530 PF01925 Sulfite exporter TauE/SafE GNY17_08535 PF01590 GAF domain GNY17_08535 PF05524 PEP-utilising enzyme, N-terminal GNY17_08535 PF00391 PEP-utilising enzyme, mobile domain GNY17_08535 PF02896 PEP-utilising enzyme, TIM barrel domain GNY17_08540 PF00293 NUDIX domain GNY17_08550 PF02976 DNA mismatch repair enzyme MutH GNY17_08560 PF00248 Aldo/keto reductase family GNY17_08570 PF00158 Sigma-54 interaction domain GNY17_08570 PF00072 Response regulator receiver domain GNY17_08570 PF02954 Bacterial regulatory protein, Fis family GNY17_08575 PF01336 OB-fold nucleic acid binding domain GNY17_08575 PF00152 tRNA synthetases class II (D, K and N) GNY17_08585 PF17768 RecJ OB domain GNY17_08585 PF01368 DHH family GNY17_08585 PF02272 DHHA1 domain GNY17_08590 PF13098 Thioredoxin-like domain GNY17_08590 PF10411 Disulfide bond isomerase protein N-terminus GNY17_08595 PF02899 Phage integrase, N-terminal SAM-like domain GNY17_08595 PF00589 Phage integrase family GNY17_08600 PF00258 Flavodoxin GNY17_08605 PF05525 Branched-chain amino acid transport protein GNY17_08610 PF05175 Methyltransferase small domain GNY17_08615 PF00270 DEAD/DEAH box helicase GNY17_08615 PF00271 Helicase conserved C-terminal domain GNY17_08620 PF03883 Peroxide stress protein YaaA GNY17_08625 PF01235 Sodium:alanine symporter family GNY17_08640 PF03167 Uracil DNA glycosylase superfamily GNY17_08650 PF01261 Xylose isomerase-like TIM barrel GNY17_08655 PF01228 Glycine radical GNY17_08660 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_08660 PF14821 Threonine synthase N terminus GNY17_08665 PF08544 GHMP kinases C terminal GNY17_08665 PF00288 GHMP kinases N terminal domain GNY17_08670 PF00742 Homoserine dehydrogenase GNY17_08670 PF01842 ACT domain GNY17_08670 PF00696 Amino acid kinase family GNY17_08670 PF03447 Homoserine dehydrogenase, NAD binding domain GNY17_08670 PF13840 ACT domain GNY17_08680 PF03737 Aldolase/RraA GNY17_08695 PF00072 Response regulator receiver domain GNY17_08695 PF00486 Transcriptional regulatory protein, C terminal GNY17_08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_08705 PF00512 His Kinase A (phospho-acceptor) domain GNY17_08705 PF18415 Histidine kinase receptor ArcB trans-membrane domain GNY17_08705 PF01627 Hpt domain GNY17_08705 PF00072 Response regulator receiver domain GNY17_08705 PF00989 PAS fold GNY17_08710 PF00563 EAL domain GNY17_08710 PF01590 GAF domain GNY17_08710 PF00990 Diguanylate cyclase, GGDEF domain GNY17_08710 PF00360 Phytochrome region GNY17_08715 PF04055 Radical SAM superfamily GNY17_08715 PF16199 Radical_SAM C-terminal domain GNY17_08720 PF00310 Glutamine amidotransferases class-II GNY17_08720 PF04898 Glutamate synthase central domain GNY17_08720 PF01493 GXGXG motif GNY17_08720 PF01645 Conserved region in glutamate synthase GNY17_08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_08725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNY17_08730 PF04898 Glutamate synthase central domain GNY17_08730 PF01645 Conserved region in glutamate synthase GNY17_08730 PF01493 GXGXG motif GNY17_08730 PF00310 Glutamine amidotransferases class-II GNY17_08735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNY17_08735 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_08745 PF01048 Phosphorylase superfamily GNY17_08750 PF03186 CobD/Cbib protein GNY17_08750 PF17113 Regulatory signalling modulator protein AmpE GNY17_08755 PF01497 Periplasmic binding protein GNY17_08760 PF03458 UPF0126 domain GNY17_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_08765 PF03466 LysR substrate binding domain GNY17_08770 PF01925 Sulfite exporter TauE/SafE GNY17_08785 PF02142 MGS-like domain GNY17_08785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNY17_08785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNY17_08790 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNY17_08790 PF00117 Glutamine amidotransferase class-I GNY17_08795 PF01113 Dihydrodipicolinate reductase, N-terminus GNY17_08795 PF05173 Dihydrodipicolinate reductase, C-terminus GNY17_08800 PF00293 NUDIX domain GNY17_08805 PF01043 SecA preprotein cross-linking domain GNY17_08805 PF07517 SecA DEAD-like domain GNY17_08805 PF07516 SecA Wing and Scaffold domain GNY17_08805 PF02810 SEC-C motif GNY17_08815 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GNY17_08820 PF12327 FtsZ family, C-terminal domain GNY17_08820 PF00091 Tubulin/FtsZ family, GTPase domain GNY17_08825 PF02491 SHS2 domain inserted in FTSA GNY17_08830 PF08478 POTRA domain, FtsQ-type GNY17_08830 PF03799 Cell division protein FtsQ GNY17_08835 PF02875 Mur ligase family, glutamate ligase domain GNY17_08835 PF01225 Mur ligase family, catalytic domain GNY17_08835 PF08245 Mur ligase middle domain GNY17_08840 PF04101 Glycosyltransferase family 28 C-terminal domain GNY17_08840 PF03033 Glycosyltransferase family 28 N-terminal domain GNY17_08845 PF01098 Cell cycle protein GNY17_08850 PF08245 Mur ligase middle domain GNY17_08850 PF02875 Mur ligase family, glutamate ligase domain GNY17_08855 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GNY17_08855 PF00953 Glycosyl transferase family 4 GNY17_08860 PF01225 Mur ligase family, catalytic domain GNY17_08860 PF02875 Mur ligase family, glutamate ligase domain GNY17_08860 PF08245 Mur ligase middle domain GNY17_08865 PF08245 Mur ligase middle domain GNY17_08865 PF02875 Mur ligase family, glutamate ligase domain GNY17_08865 PF01225 Mur ligase family, catalytic domain GNY17_08870 PF03717 Penicillin-binding Protein dimerisation domain GNY17_08870 PF00905 Penicillin binding protein transpeptidase domain GNY17_08875 PF04999 Cell division protein FtsL GNY17_08880 PF01795 MraW methylase family GNY17_08895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNY17_08900 PF04348 LppC putative lipoprotein GNY17_08905 PF02021 Uncharacterised protein family UPF0102 GNY17_08910 PF13580 SIS domain GNY17_08915 PF04972 BON domain GNY17_08920 PF04386 Stringent starvation protein B GNY17_08925 PF00043 Glutathione S-transferase, C-terminal domain GNY17_08925 PF02798 Glutathione S-transferase, N-terminal domain GNY17_08930 PF02167 Cytochrome C1 family GNY17_08935 PF00032 Cytochrome b(C-terminal)/b6/petD GNY17_08935 PF00033 Cytochrome b/b6/petB GNY17_08940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GNY17_08940 PF00355 Rieske [2Fe-2S] domain GNY17_08945 PF00380 Ribosomal protein S9/S16 GNY17_08950 PF00572 Ribosomal protein L13 GNY17_08960 PF03969 AFG1-like ATPase GNY17_08970 PF06295 Protein of unknown function (DUF1043) GNY17_08975 PF00595 PDZ domain GNY17_08980 PF13180 PDZ domain GNY17_08985 PF03989 DNA gyrase C-terminal domain, beta-propeller GNY17_08985 PF00521 DNA gyrase/topoisomerase IV, subunit A GNY17_08990 PF00204 DNA gyrase B GNY17_08990 PF00986 DNA gyrase B subunit, carboxyl terminus GNY17_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_08990 PF01751 Toprim domain GNY17_08995 PF05728 Uncharacterised protein family (UPF0227) GNY17_09000 PF00149 Calcineurin-like phosphoesterase GNY17_09005 PF06853 Protein of unknown function (DUF1249) GNY17_09010 PF00293 NUDIX domain GNY17_09015 PF02321 Outer membrane efflux protein GNY17_09020 PF00294 pfkB family carbohydrate kinase GNY17_09020 PF01467 Cytidylyltransferase-like GNY17_09025 PF03710 Glutamate-ammonia ligase adenylyltransferase GNY17_09025 PF08335 GlnD PII-uridylyltransferase GNY17_09030 PF00672 HAMP domain GNY17_09030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_09040 PF01928 CYTH domain GNY17_09045 PF01865 Protein of unknown function DUF47 GNY17_09050 PF01384 Phosphate transporter family GNY17_09055 PF08239 Bacterial SH3 domain GNY17_09065 PF13401 AAA domain GNY17_09065 PF01471 Putative peptidoglycan binding domain GNY17_09070 PF01966 HD domain GNY17_09070 PF12627 Probable RNA and SrmB- binding site of polymerase A GNY17_09070 PF01743 Poly A polymerase head domain GNY17_09075 PF02673 Bacitracin resistance protein BacA GNY17_09080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GNY17_09085 PF02152 Dihydroneopterin aldolase GNY17_09090 PF02660 Glycerol-3-phosphate acyltransferase GNY17_09095 PF12697 Alpha/beta hydrolase family GNY17_09100 PF00814 Glycoprotease family GNY17_09105 PF01165 Ribosomal protein S21 GNY17_09110 PF09424 Yqey-like protein GNY17_09115 PF10410 DnaB-helicase binding domain of primase GNY17_09115 PF08275 DNA primase catalytic core, N-terminal domain GNY17_09115 PF01807 CHC2 zinc finger GNY17_09115 PF08278 DNA primase DnaG DnaB-binding GNY17_09120 PF04545 Sigma-70, region 4 GNY17_09120 PF00140 Sigma-70 factor, region 1.2 GNY17_09120 PF04539 Sigma-70 region 3 GNY17_09120 PF04542 Sigma-70 region 2 GNY17_09120 PF03979 Sigma-70 factor, region 1.1 GNY17_09120 PF04546 Sigma-70, non-essential region GNY17_09170 PF08463 EcoEI R protein C-terminal GNY17_09170 PF00271 Helicase conserved C-terminal domain GNY17_09170 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GNY17_09170 PF04851 Type III restriction enzyme, res subunit GNY17_09175 PF01555 DNA methylase GNY17_09205 PF12161 HsdM N-terminal domain GNY17_09205 PF02384 N-6 DNA Methylase GNY17_09215 PF01381 Helix-turn-helix GNY17_09235 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GNY17_09235 PF11867 Domain of unknown function (DUF3387) GNY17_09235 PF18766 SWI2/SNF2 ATPase GNY17_09250 PF12161 HsdM N-terminal domain GNY17_09250 PF02384 N-6 DNA Methylase GNY17_09285 PF01420 Type I restriction modification DNA specificity domain GNY17_09335 PF03180 NLPA lipoprotein GNY17_09370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_09370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_09370 PF02378 Phosphotransferase system, EIIC GNY17_09375 PF01232 Mannitol dehydrogenase Rossmann domain GNY17_09375 PF08125 Mannitol dehydrogenase C-terminal domain GNY17_09380 PF05068 Mannitol repressor GNY17_09385 PF13419 Haloacid dehalogenase-like hydrolase GNY17_09390 PF00672 HAMP domain GNY17_09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_09390 PF00512 His Kinase A (phospho-acceptor) domain GNY17_09395 PF00486 Transcriptional regulatory protein, C terminal GNY17_09395 PF00072 Response regulator receiver domain GNY17_09405 PF01380 SIS domain GNY17_09410 PF00455 DeoR C terminal sensor domain GNY17_09410 PF08220 DeoR-like helix-turn-helix domain GNY17_09420 PF00224 Pyruvate kinase, barrel domain GNY17_09420 PF02887 Pyruvate kinase, alpha/beta domain GNY17_09430 PF07694 5TMR of 5TMR-LYT GNY17_09430 PF00990 Diguanylate cyclase, GGDEF domain GNY17_09435 PF10369 Small subunit of acetolactate synthase GNY17_09440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNY17_09440 PF00205 Thiamine pyrophosphate enzyme, central domain GNY17_09440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNY17_09445 PF00501 AMP-binding enzyme GNY17_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_09450 PF03466 LysR substrate binding domain GNY17_09470 PF08502 LeuA allosteric (dimerisation) domain GNY17_09470 PF00682 HMGL-like GNY17_09475 PF00180 Isocitrate/isopropylmalate dehydrogenase GNY17_09480 PF00330 Aconitase family (aconitate hydratase) GNY17_09485 PF00694 Aconitase C-terminal domain GNY17_09495 PF05099 Tellurite resistance protein TerB GNY17_09495 PF00226 DnaJ domain GNY17_09500 PF03968 OstA-like protein GNY17_09500 PF04453 LPS transport system D GNY17_09505 PF09312 SurA N-terminal domain GNY17_09510 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GNY17_09515 PF00398 Ribosomal RNA adenine dimethylase GNY17_09520 PF04379 ApaG domain GNY17_09525 PF00149 Calcineurin-like phosphoesterase GNY17_09530 PF00186 Dihydrofolate reductase GNY17_09535 PF12821 Threonine/Serine exporter, ThrE GNY17_09540 PF06738 Putative threonine/serine exporter GNY17_09545 PF01018 GTP1/OBG GNY17_09545 PF01926 50S ribosome-binding GTPase GNY17_09550 PF01016 Ribosomal L27 protein GNY17_09555 PF00829 Ribosomal prokaryotic L21 protein GNY17_09560 PF00348 Polyprenyl synthetase GNY17_09570 PF00056 lactate/malate dehydrogenase, NAD binding domain GNY17_09570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNY17_09575 PF01316 Arginine repressor, DNA binding domain GNY17_09575 PF02863 Arginine repressor, C-terminal domain GNY17_09585 PF16868 NMT1-like family GNY17_09605 PF00005 ABC transporter GNY17_09610 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_09620 PF02441 Flavoprotein GNY17_09625 PF02875 Mur ligase family, glutamate ligase domain GNY17_09625 PF08245 Mur ligase middle domain GNY17_09625 PF01225 Mur ligase family, catalytic domain GNY17_09635 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GNY17_09640 PF00719 Inorganic pyrophosphatase GNY17_09650 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GNY17_09655 PF04357 TamB, inner membrane protein subunit of TAM complex GNY17_09660 PF01103 Surface antigen GNY17_09660 PF17243 POTRA domain TamA domain 1 GNY17_09665 PF01625 Peptide methionine sulfoxide reductase GNY17_09670 PF06526 Protein of unknown function (DUF1107) GNY17_09675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GNY17_09680 PF10795 Protein of unknown function (DUF2607) GNY17_09690 PF00005 ABC transporter GNY17_09715 PF02080 TrkA-C domain GNY17_09715 PF03600 Citrate transporter GNY17_09725 PF00009 Elongation factor Tu GTP binding domain GNY17_09730 PF01507 Phosphoadenosine phosphosulfate reductase family GNY17_09735 PF10414 Sirohaem synthase dimerisation region GNY17_09735 PF14824 Sirohaem biosynthesis protein central GNY17_09735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNY17_09740 PF02872 5'-nucleotidase, C-terminal domain GNY17_09740 PF00149 Calcineurin-like phosphoesterase GNY17_09750 PF00271 Helicase conserved C-terminal domain GNY17_09750 PF03880 DbpA RNA binding domain GNY17_09750 PF00270 DEAD/DEAH box helicase GNY17_09755 PF13673 Acetyltransferase (GNAT) domain GNY17_09765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_09765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GNY17_09775 PF01196 Ribosomal protein L17 GNY17_09780 PF01000 RNA polymerase Rpb3/RpoA insert domain GNY17_09780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GNY17_09780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GNY17_09785 PF00163 Ribosomal protein S4/S9 N-terminal domain GNY17_09785 PF01479 S4 domain GNY17_09790 PF00411 Ribosomal protein S11 GNY17_09795 PF00416 Ribosomal protein S13/S18 GNY17_09800 PF00444 Ribosomal protein L36 GNY17_09805 PF00344 SecY translocase GNY17_09810 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GNY17_09815 PF00327 Ribosomal protein L30p/L7e GNY17_09820 PF00333 Ribosomal protein S5, N-terminal domain GNY17_09820 PF03719 Ribosomal protein S5, C-terminal domain GNY17_09825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GNY17_09830 PF00347 Ribosomal protein L6 GNY17_09835 PF00410 Ribosomal protein S8 GNY17_09840 PF00253 Ribosomal protein S14p/S29e GNY17_09845 PF00281 Ribosomal protein L5 GNY17_09845 PF00673 ribosomal L5P family C-terminus GNY17_09850 PF00467 KOW motif GNY17_09850 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GNY17_09855 PF00238 Ribosomal protein L14p/L23e GNY17_09860 PF00366 Ribosomal protein S17 GNY17_09865 PF00831 Ribosomal L29 protein GNY17_09870 PF00252 Ribosomal protein L16p/L10e GNY17_09875 PF00189 Ribosomal protein S3, C-terminal domain GNY17_09875 PF07650 KH domain GNY17_09880 PF00237 Ribosomal protein L22p/L17e GNY17_09885 PF00203 Ribosomal protein S19 GNY17_09890 PF03947 Ribosomal Proteins L2, C-terminal domain GNY17_09890 PF00181 Ribosomal Proteins L2, RNA binding domain GNY17_09895 PF00276 Ribosomal protein L23 GNY17_09900 PF00573 Ribosomal protein L4/L1 family GNY17_09905 PF00297 Ribosomal protein L3 GNY17_09910 PF00338 Ribosomal protein S10p/S20e GNY17_09915 PF01197 Ribosomal protein L31 GNY17_09925 PF00270 DEAD/DEAH box helicase GNY17_09925 PF00271 Helicase conserved C-terminal domain GNY17_09925 PF17764 3′ DNA-binding domain (3′BD) GNY17_09925 PF18074 Primosomal protein N C-terminal domain GNY17_09925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GNY17_09930 PF00356 Bacterial regulatory proteins, lacI family GNY17_09940 PF00227 Proteasome subunit GNY17_09945 PF07724 AAA domain (Cdc48 subfamily) GNY17_09945 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_09960 PF04002 RadC-like JAB domain GNY17_09990 PF01040 UbiA prenyltransferase family GNY17_09995 PF03737 Aldolase/RraA GNY17_10000 PF06005 Cell division protein ZapB GNY17_10010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GNY17_10015 PF08220 DeoR-like helix-turn-helix domain GNY17_10015 PF00455 DeoR C terminal sensor domain GNY17_10035 PF00121 Triosephosphate isomerase GNY17_10075 PF00483 Nucleotidyl transferase GNY17_10080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNY17_10080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNY17_10080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNY17_10085 PF02719 Polysaccharide biosynthesis protein GNY17_10090 PF02397 Bacterial sugar transferase GNY17_10095 PF01370 NAD dependent epimerase/dehydratase family GNY17_10110 PF13439 Glycosyltransferase Family 4 GNY17_10115 PF00535 Glycosyl transferase family 2 GNY17_10130 PF00535 Glycosyl transferase family 2 GNY17_10135 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_10135 PF12464 Maltose acetyltransferase GNY17_10140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNY17_10145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNY17_10150 PF08485 Polysaccharide biosynthesis protein C-terminal GNY17_10150 PF02719 Polysaccharide biosynthesis protein GNY17_10195 PF06082 Exopolysaccharide biosynthesis protein YbjH GNY17_10200 PF01370 NAD dependent epimerase/dehydratase family GNY17_10205 PF03279 Bacterial lipid A biosynthesis acyltransferase GNY17_10210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GNY17_10215 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GNY17_10225 PF00534 Glycosyl transferases group 1 GNY17_10225 PF13439 Glycosyltransferase Family 4 GNY17_10240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNY17_10245 PF01575 MaoC like domain GNY17_10250 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_10255 PF05523 WxcM-like, C-terminal GNY17_10260 PF00483 Nucleotidyl transferase GNY17_10265 PF16363 GDP-mannose 4,6 dehydratase GNY17_10275 PF01219 Prokaryotic diacylglycerol kinase GNY17_10280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GNY17_10285 PF00535 Glycosyl transferase family 2 GNY17_10290 PF13439 Glycosyltransferase Family 4 GNY17_10290 PF00534 Glycosyl transferases group 1 GNY17_10295 PF01467 Cytidylyltransferase-like GNY17_10300 PF05686 Glycosyl transferase family 90 GNY17_10305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GNY17_10305 PF06827 Zinc finger found in FPG and IleRS GNY17_10305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GNY17_10315 PF00471 Ribosomal protein L33 GNY17_10320 PF00830 Ribosomal L28 family GNY17_10325 PF04002 RadC-like JAB domain GNY17_10330 PF17200 Single Cache domain 2 GNY17_10330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_10330 PF00672 HAMP domain GNY17_10340 PF02441 Flavoprotein GNY17_10340 PF04127 DNA / pantothenate metabolism flavoprotein GNY17_10345 PF00440 Bacterial regulatory proteins, tetR family GNY17_10350 PF03279 Bacterial lipid A biosynthesis acyltransferase GNY17_10355 PF00156 Phosphoribosyl transferase domain GNY17_10360 PF03725 3' exoribonuclease family, domain 2 GNY17_10360 PF01138 3' exoribonuclease family, domain 1 GNY17_10365 PF03755 YicC-like family, N-terminal region GNY17_10365 PF08340 Domain of unknown function (DUF1732) GNY17_10425 PF00005 ABC transporter GNY17_10425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_10430 PF00005 ABC transporter GNY17_10430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_10435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_10440 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_10440 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_10445 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_10455 PF00593 TonB dependent receptor GNY17_10455 PF07715 TonB-dependent Receptor Plug Domain GNY17_10470 PF01618 MotA/TolQ/ExbB proton channel family GNY17_10475 PF02472 Biopolymer transport protein ExbD/TolR GNY17_10490 PF00625 Guanylate kinase GNY17_10495 PF01192 RNA polymerase Rpb6 GNY17_10500 PF04607 Region found in RelA / SpoT proteins GNY17_10500 PF02824 TGS domain GNY17_10500 PF13291 ACT domain GNY17_10505 PF12105 SpoU, rRNA methylase, C-terminal GNY17_10505 PF00588 SpoU rRNA Methylase family GNY17_10510 PF00270 DEAD/DEAH box helicase GNY17_10510 PF00271 Helicase conserved C-terminal domain GNY17_10510 PF17191 RecG wedge domain GNY17_10515 PF00860 Permease family GNY17_10520 PF00672 HAMP domain GNY17_10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_10520 PF00512 His Kinase A (phospho-acceptor) domain GNY17_10525 PF00072 Response regulator receiver domain GNY17_10525 PF00486 Transcriptional regulatory protein, C terminal GNY17_10535 PF03449 Transcription elongation factor, N-terminal GNY17_10535 PF01272 Transcription elongation factor, GreA/GreB, C-term GNY17_10545 PF17674 HHH domain GNY17_10545 PF16921 Tex protein YqgF-like domain GNY17_10545 PF09371 Tex-like protein N-terminal domain GNY17_10545 PF00575 S1 RNA binding domain GNY17_10555 PF00561 alpha/beta hydrolase fold GNY17_10560 PF00156 Phosphoribosyl transferase domain GNY17_10565 PF01106 NifU-like domain GNY17_10565 PF01521 Iron-sulphur cluster biosynthesis GNY17_10570 PF00293 NUDIX domain GNY17_10575 PF00459 Inositol monophosphatase family GNY17_10580 PF01203 Type II secretion system (T2SS), protein N GNY17_10585 PF04612 Type II secretion system (T2SS), protein M GNY17_10590 PF12693 GspL periplasmic domain GNY17_10590 PF05134 Type II secretion system (T2SS), protein L GNY17_10595 PF03934 Type II secretion system (T2SS), protein K GNY17_10600 PF11612 Type II secretion system (T2SS), protein J GNY17_10600 PF07963 Prokaryotic N-terminal methylation motif GNY17_10605 PF02501 Type II secretion system (T2SS), protein I GNY17_10605 PF07963 Prokaryotic N-terminal methylation motif GNY17_10610 PF12019 Type II transport protein GspH GNY17_10615 PF08334 Type II secretion system (T2SS), protein G GNY17_10615 PF07963 Prokaryotic N-terminal methylation motif GNY17_10620 PF00482 Type II secretion system (T2SS), protein F GNY17_10625 PF00437 Type II/IV secretion system protein GNY17_10630 PF00263 Bacterial type II and III secretion system protein GNY17_10630 PF03958 Bacterial type II/III secretion system short domain GNY17_10635 PF11356 Type II secretion system protein C GNY17_10640 PF01479 S4 domain GNY17_10645 PF01430 Hsp33 protein GNY17_10650 PF01293 Phosphoenolpyruvate carboxykinase GNY17_10660 PF09500 Putative thioesterase (yiiD_Cterm) GNY17_10660 PF00583 Acetyltransferase (GNAT) family GNY17_10665 PF02580 D-Tyr-tRNA(Tyr) deacylase GNY17_10670 PF03631 Virulence factor BrkB GNY17_10690 PF00120 Glutamine synthetase, catalytic domain GNY17_10690 PF03951 Glutamine synthetase, beta-Grasp domain GNY17_10700 PF00989 PAS fold GNY17_10700 PF00512 His Kinase A (phospho-acceptor) domain GNY17_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_10705 PF00158 Sigma-54 interaction domain GNY17_10705 PF00072 Response regulator receiver domain GNY17_10705 PF02954 Bacterial regulatory protein, Fis family GNY17_10710 PF03707 Bacterial signalling protein N terminal repeat GNY17_10710 PF00563 EAL domain GNY17_10710 PF00990 Diguanylate cyclase, GGDEF domain GNY17_10715 PF00962 Adenosine/AMP deaminase GNY17_10720 PF04055 Radical SAM superfamily GNY17_10720 PF06969 HemN C-terminal domain GNY17_10725 PF10675 Protein of unknown function (DUF2489) GNY17_10730 PF04220 Der GTPase activator (YihI) GNY17_10745 PF00034 Cytochrome c GNY17_10750 PF01926 50S ribosome-binding GTPase GNY17_10760 PF01367 5'-3' exonuclease, C-terminal SAM fold GNY17_10760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNY17_10760 PF00476 DNA polymerase family A GNY17_10760 PF01612 3'-5' exonuclease GNY17_10775 PF00490 Delta-aminolevulinic acid dehydratase GNY17_10785 PF01026 TatD related DNase GNY17_10795 PF00902 Sec-independent protein translocase protein (TatC) GNY17_10800 PF02416 mttA/Hcf106 family GNY17_10805 PF02416 mttA/Hcf106 family GNY17_10810 PF03109 ABC1 family GNY17_10815 PF02036 SCP-2 sterol transfer family GNY17_10820 PF01209 ubiE/COQ5 methyltransferase family GNY17_10825 PF02646 RmuC family GNY17_10835 PF03707 Bacterial signalling protein N terminal repeat GNY17_10835 PF00563 EAL domain GNY17_10835 PF00990 Diguanylate cyclase, GGDEF domain GNY17_10840 PF01594 AI-2E family transporter GNY17_10890 PF04972 BON domain GNY17_10895 PF01590 GAF domain GNY17_10895 PF02954 Bacterial regulatory protein, Fis family GNY17_10895 PF00158 Sigma-54 interaction domain GNY17_10905 PF10625 Universal stress protein B (UspB) GNY17_10910 PF00210 Ferritin-like domain GNY17_10915 PF00582 Universal stress protein family GNY17_10920 PF00892 EamA-like transporter family GNY17_10930 PF04445 Putative SAM-dependent methyltransferase GNY17_10935 PF00990 Diguanylate cyclase, GGDEF domain GNY17_10935 PF08448 PAS fold GNY17_10935 PF00563 EAL domain GNY17_10940 PF01037 Lrp/AsnC ligand binding domain GNY17_10945 PF01432 Peptidase family M3 GNY17_10950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GNY17_10955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNY17_10955 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_10960 PF03466 LysR substrate binding domain GNY17_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_10965 PF01048 Phosphorylase superfamily GNY17_10970 PF01081 KDPG and KHG aldolase GNY17_10975 PF02447 GntP family permease GNY17_10980 PF01202 Shikimate kinase GNY17_10985 PF00920 Dehydratase family GNY17_10990 PF00893 Small Multidrug Resistance protein GNY17_10995 PF00893 Small Multidrug Resistance protein GNY17_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_11000 PF03466 LysR substrate binding domain GNY17_11005 PF00356 Bacterial regulatory proteins, lacI family GNY17_11005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNY17_11010 PF00069 Protein kinase domain GNY17_11045 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_11045 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_11055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_11060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_11060 PF00005 ABC transporter GNY17_11075 PF13419 Haloacid dehalogenase-like hydrolase GNY17_11110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNY17_11115 PF13361 UvrD-like helicase C-terminal domain GNY17_11115 PF00580 UvrD/REP helicase N-terminal domain GNY17_11120 PF16295 Tetracyclin repressor-like, C-terminal domain GNY17_11120 PF00440 Bacterial regulatory proteins, tetR family GNY17_11125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_11130 PF00873 AcrB/AcrD/AcrF family GNY17_11140 PF04380 Membrane fusogenic activity GNY17_11145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GNY17_11145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GNY17_11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_11150 PF03466 LysR substrate binding domain GNY17_11190 PF12724 Flavodoxin domain GNY17_11195 PF02386 Cation transport protein GNY17_11200 PF09186 Domain of unknown function (DUF1949) GNY17_11200 PF01205 Uncharacterized protein family UPF0029 GNY17_11205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNY17_11205 PF00378 Enoyl-CoA hydratase/isomerase GNY17_11205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNY17_11210 PF00108 Thiolase, N-terminal domain GNY17_11210 PF02803 Thiolase, C-terminal domain GNY17_11215 PF00107 Zinc-binding dehydrogenase GNY17_11215 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_11220 PF03466 LysR substrate binding domain GNY17_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_11230 PF01206 Sulfurtransferase TusA GNY17_11240 PF01169 Uncharacterized protein family UPF0016 GNY17_11245 PF02091 Glycyl-tRNA synthetase alpha subunit GNY17_11250 PF02092 Glycyl-tRNA synthetase beta subunit GNY17_11250 PF05746 DALR anticodon binding domain GNY17_11255 PF00128 Alpha amylase, catalytic domain GNY17_11260 PF00155 Aminotransferase class I and II GNY17_11265 PF00011 Hsp20/alpha crystallin family GNY17_11285 PF18053 DNA gyrase B subunit insert domain GNY17_11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_11285 PF01751 Toprim domain GNY17_11285 PF00986 DNA gyrase B subunit, carboxyl terminus GNY17_11285 PF00204 DNA gyrase B GNY17_11290 PF02463 RecF/RecN/SMC N terminal domain GNY17_11295 PF00712 DNA polymerase III beta subunit, N-terminal domain GNY17_11295 PF02768 DNA polymerase III beta subunit, C-terminal domain GNY17_11295 PF02767 DNA polymerase III beta subunit, central domain GNY17_11300 PF00308 Bacterial dnaA protein GNY17_11300 PF11638 DnaA N-terminal domain GNY17_11300 PF08299 Bacterial dnaA protein helix-turn-helix GNY17_11315 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_11320 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_11325 PF00005 ABC transporter GNY17_11330 PF00468 Ribosomal protein L34 GNY17_11335 PF00825 Ribonuclease P GNY17_11340 PF01809 Putative membrane protein insertion efficiency factor GNY17_11345 PF02096 60Kd inner membrane protein GNY17_11345 PF14849 YidC periplasmic domain GNY17_11350 PF10396 GTP-binding protein TrmE N-terminus GNY17_11350 PF12631 MnmE helical domain GNY17_11350 PF01926 50S ribosome-binding GTPase GNY17_11355 PF00258 Flavodoxin GNY17_11360 PF13932 GidA associated domain GNY17_11360 PF01134 Glucose inhibited division protein A GNY17_11365 PF02527 rRNA small subunit methyltransferase G GNY17_11370 PF13614 AAA domain GNY17_11375 PF02195 ParB-like nuclease domain GNY17_11375 PF17762 HTH domain found in ParB protein GNY17_11380 PF03899 ATP synthase I chain GNY17_11385 PF00119 ATP synthase A chain GNY17_11390 PF00137 ATP synthase subunit C GNY17_11395 PF00430 ATP synthase B/B' CF(0) GNY17_11400 PF00213 ATP synthase delta (OSCP) subunit GNY17_11405 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNY17_11405 PF00306 ATP synthase alpha/beta chain, C terminal domain GNY17_11405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_11410 PF00231 ATP synthase GNY17_11415 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNY17_11415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_11420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GNY17_11420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GNY17_11425 PF12804 MobA-like NTP transferase domain GNY17_11425 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_11430 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_11435 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_11440 PF07690 Major Facilitator Superfamily GNY17_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_11445 PF03466 LysR substrate binding domain GNY17_11450 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_11450 PF00585 C-terminal regulatory domain of Threonine dehydratase GNY17_11455 PF00920 Dehydratase family GNY17_11460 PF01063 Amino-transferase class IV GNY17_11470 PF00205 Thiamine pyrophosphate enzyme, central domain GNY17_11470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNY17_11470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNY17_11475 PF01078 Magnesium chelatase, subunit ChlI GNY17_11475 PF13335 Magnesium chelatase, subunit ChlI C-terminal GNY17_11485 PF01553 Acyltransferase GNY17_11490 PF01323 DSBA-like thioredoxin domain GNY17_11495 PF01636 Phosphotransferase enzyme family GNY17_11500 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GNY17_11500 PF13746 4Fe-4S dicluster domain GNY17_11500 PF12801 4Fe-4S binding domain GNY17_11505 PF06288 Protein of unknown function (DUF1040) GNY17_11515 PF07070 SpoOM protein GNY17_11520 PF03006 Haemolysin-III related GNY17_11530 PF02386 Cation transport protein GNY17_11535 PF02254 TrkA-N domain GNY17_11535 PF02080 TrkA-C domain GNY17_11540 PF01189 16S rRNA methyltransferase RsmB/F GNY17_11540 PF01029 NusB family GNY17_11545 PF02911 Formyl transferase, C-terminal domain GNY17_11545 PF00551 Formyl transferase GNY17_11550 PF01327 Polypeptide deformylase GNY17_11560 PF17782 DprA winged helix domain GNY17_11560 PF02481 DNA recombination-mediator protein A GNY17_11565 PF04361 Protein of unknown function (DUF494) GNY17_11570 PF01396 Topoisomerase DNA binding C4 zinc finger GNY17_11575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GNY17_11575 PF02222 ATP-grasp domain GNY17_11580 PF00731 AIR carboxylase GNY17_11585 PF01300 Telomere recombination GNY17_11590 PF01218 Coproporphyrinogen III oxidase GNY17_11595 PF01488 Shikimate / quinate 5-dehydrogenase GNY17_11595 PF08501 Shikimate dehydrogenase substrate binding domain GNY17_11595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GNY17_11600 PF07369 Protein of unknown function (DUF1488) GNY17_11605 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_11650 PF14659 Phage integrase, N-terminal SAM-like domain GNY17_11650 PF00589 Phage integrase family GNY17_11685 PF01381 Helix-turn-helix GNY17_11705 PF11867 Domain of unknown function (DUF3387) GNY17_11705 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GNY17_11705 PF18766 SWI2/SNF2 ATPase GNY17_11720 PF12161 HsdM N-terminal domain GNY17_11720 PF02384 N-6 DNA Methylase GNY17_11760 PF18766 SWI2/SNF2 ATPase GNY17_11760 PF12008 Type I restriction and modification enzyme - subunit R C terminal GNY17_11760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GNY17_11820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNY17_11825 PF01964 Radical SAM ThiC family GNY17_11825 PF13667 ThiC-associated domain GNY17_11830 PF02581 Thiamine monophosphate synthase GNY17_11835 PF00899 ThiF family GNY17_11840 PF02597 ThiS family GNY17_11845 PF05690 Thiazole biosynthesis protein ThiG GNY17_11850 PF04055 Radical SAM superfamily GNY17_11850 PF06968 Biotin and Thiamin Synthesis associated domain GNY17_11855 PF00557 Metallopeptidase family M24 GNY17_11855 PF01321 Creatinase/Prolidase N-terminal domain GNY17_11860 PF03466 LysR substrate binding domain GNY17_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_11865 PF07690 Major Facilitator Superfamily GNY17_11885 PF05114 Protein of unknown function (DUF692) GNY17_11895 PF13361 UvrD-like helicase C-terminal domain GNY17_11895 PF00580 UvrD/REP helicase N-terminal domain GNY17_11910 PF01810 LysE type translocator GNY17_11920 PF00892 EamA-like transporter family GNY17_11925 PF00570 HRDC domain GNY17_11925 PF00271 Helicase conserved C-terminal domain GNY17_11925 PF00270 DEAD/DEAH box helicase GNY17_11925 PF16124 RecQ zinc-binding GNY17_11925 PF09382 RQC domain GNY17_11940 PF02592 Putative vitamin uptake transporter GNY17_11945 PF02541 Ppx/GppA phosphatase family GNY17_11950 PF00270 DEAD/DEAH box helicase GNY17_11950 PF00271 Helicase conserved C-terminal domain GNY17_11955 PF00085 Thioredoxin GNY17_11960 PF07498 Rho termination factor, N-terminal domain GNY17_11960 PF07497 Rho termination factor, RNA-binding domain GNY17_11960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_11975 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GNY17_11980 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_11985 PF00175 Oxidoreductase NAD-binding domain GNY17_12030 PF07219 HemY protein N-terminus GNY17_12035 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GNY17_12040 PF02602 Uroporphyrinogen-III synthase HemD GNY17_12045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GNY17_12045 PF03900 Porphobilinogen deaminase, C-terminal domain GNY17_12050 PF12633 Adenylate cyclase NT domain GNY17_12050 PF01295 Adenylate cyclase, class-I GNY17_12055 PF01491 Frataxin-like domain GNY17_12065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNY17_12065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNY17_12070 PF01678 Diaminopimelate epimerase GNY17_12080 PF02899 Phage integrase, N-terminal SAM-like domain GNY17_12080 PF00589 Phage integrase family GNY17_12085 PF13419 Haloacid dehalogenase-like hydrolase GNY17_12090 PF00563 EAL domain GNY17_12090 PF08495 FIST N domain GNY17_12090 PF10442 FIST C domain GNY17_12090 PF00990 Diguanylate cyclase, GGDEF domain GNY17_12115 PF12146 Serine aminopeptidase, S33 GNY17_12120 PF01810 LysE type translocator GNY17_12125 PF00563 EAL domain GNY17_12125 PF08668 HDOD domain GNY17_12130 PF01022 Bacterial regulatory protein, arsR family GNY17_12135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNY17_12135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNY17_12190 PF01914 MarC family integral membrane protein GNY17_12205 PF02881 SRP54-type protein, helical bundle domain GNY17_12205 PF00448 SRP54-type protein, GTPase domain GNY17_12210 PF00005 ABC transporter GNY17_12215 PF18075 FtsX extracellular domain GNY17_12220 PF00140 Sigma-70 factor, region 1.2 GNY17_12220 PF04542 Sigma-70 region 2 GNY17_12220 PF04545 Sigma-70, region 4 GNY17_12225 PF00581 Rhodanese-like domain GNY17_12230 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GNY17_12230 PF01694 Rhomboid family GNY17_12235 PF03748 Flagellar basal body-associated protein FliL GNY17_12240 PF04345 Chorismate lyase GNY17_12245 PF01040 UbiA prenyltransferase family GNY17_12250 PF01553 Acyltransferase GNY17_12260 PF01726 LexA DNA binding domain GNY17_12260 PF00717 Peptidase S24-like GNY17_12265 PF04072 Leucine carboxyl methyltransferase GNY17_12270 PF01554 MatE GNY17_12275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNY17_12275 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_12280 PF00440 Bacterial regulatory proteins, tetR family GNY17_12290 PF05958 tRNA (Uracil-5-)-methyltransferase GNY17_12295 PF07715 TonB-dependent Receptor Plug Domain GNY17_12295 PF00593 TonB dependent receptor GNY17_12305 PF01177 Asp/Glu/Hydantoin racemase GNY17_12360 PF13091 PLD-like domain GNY17_12370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GNY17_12370 PF01565 FAD binding domain GNY17_12375 PF02237 Biotin protein ligase C terminal domain GNY17_12375 PF08279 HTH domain GNY17_12375 PF03099 Biotin/lipoate A/B protein ligase family GNY17_12380 PF00485 Phosphoribulokinase / Uridine kinase family GNY17_12405 PF00009 Elongation factor Tu GTP binding domain GNY17_12405 PF03144 Elongation factor Tu domain 2 GNY17_12405 PF03143 Elongation factor Tu C-terminal domain GNY17_12415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GNY17_12420 PF02357 Transcription termination factor nusG GNY17_12420 PF00467 KOW motif GNY17_12425 PF03946 Ribosomal protein L11, N-terminal domain GNY17_12425 PF00298 Ribosomal protein L11, RNA binding domain GNY17_12430 PF00687 Ribosomal protein L1p/L10e family GNY17_12435 PF00466 Ribosomal protein L10 GNY17_12440 PF16320 Ribosomal protein L7/L12 dimerisation domain GNY17_12440 PF00542 Ribosomal protein L7/L12 C-terminal domain GNY17_12445 PF04563 RNA polymerase beta subunit GNY17_12445 PF04561 RNA polymerase Rpb2, domain 2 GNY17_12445 PF04560 RNA polymerase Rpb2, domain 7 GNY17_12445 PF04565 RNA polymerase Rpb2, domain 3 GNY17_12445 PF00562 RNA polymerase Rpb2, domain 6 GNY17_12445 PF10385 RNA polymerase beta subunit external 1 domain GNY17_12450 PF04998 RNA polymerase Rpb1, domain 5 GNY17_12450 PF05000 RNA polymerase Rpb1, domain 4 GNY17_12450 PF04997 RNA polymerase Rpb1, domain 1 GNY17_12450 PF04983 RNA polymerase Rpb1, domain 3 GNY17_12450 PF00623 RNA polymerase Rpb1, domain 2 GNY17_12455 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GNY17_12460 PF09297 NADH pyrophosphatase zinc ribbon domain GNY17_12460 PF00293 NUDIX domain GNY17_12475 PF01208 Uroporphyrinogen decarboxylase (URO-D) GNY17_12480 PF03167 Uracil DNA glycosylase superfamily GNY17_12485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNY17_12490 PF04222 Protein of unknown function (DUF416) GNY17_12495 PF01595 Cyclin M transmembrane N-terminal domain GNY17_12495 PF00571 CBS domain GNY17_12500 PF00216 Bacterial DNA-binding protein GNY17_12510 PF02843 Phosphoribosylglycinamide synthetase, C domain GNY17_12510 PF02844 Phosphoribosylglycinamide synthetase, N domain GNY17_12510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GNY17_12520 PF02142 MGS-like domain GNY17_12520 PF01808 AICARFT/IMPCHase bienzyme GNY17_12530 PF13411 MerR HTH family regulatory protein GNY17_12535 PF00486 Transcriptional regulatory protein, C terminal GNY17_12535 PF18500 CadC C-terminal domain 1 GNY17_12545 PF13520 Amino acid permease GNY17_12550 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNY17_12550 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GNY17_12550 PF01276 Orn/Lys/Arg decarboxylase, major domain GNY17_12615 PF00990 Diguanylate cyclase, GGDEF domain GNY17_12615 PF05230 MASE2 domain GNY17_12620 PF00005 ABC transporter GNY17_12620 PF12848 ABC transporter GNY17_12625 PF07690 Major Facilitator Superfamily GNY17_12630 PF02954 Bacterial regulatory protein, Fis family GNY17_12635 PF01207 Dihydrouridine synthase (Dus) GNY17_12650 PF00289 Biotin carboxylase, N-terminal domain GNY17_12650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNY17_12650 PF02785 Biotin carboxylase C-terminal domain GNY17_12655 PF00364 Biotin-requiring enzyme GNY17_12660 PF01220 Dehydroquinase class II GNY17_12665 PF13193 AMP-binding enzyme C-terminal domain GNY17_12665 PF00501 AMP-binding enzyme GNY17_12665 PF16177 Acetyl-coenzyme A synthetase N-terminus GNY17_12680 PF12832 MFS_1 like family GNY17_12685 PF00072 Response regulator receiver domain GNY17_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_12685 PF09308 LuxQ, periplasmic GNY17_12685 PF00512 His Kinase A (phospho-acceptor) domain GNY17_12690 PF10415 Fumarase C C-terminus GNY17_12690 PF00206 Lyase GNY17_12710 PF00474 Sodium:solute symporter family GNY17_12720 PF03471 Transporter associated domain GNY17_12720 PF00999 Sodium/hydrogen exchanger family GNY17_12720 PF02080 TrkA-C domain GNY17_12725 PF00196 Bacterial regulatory proteins, luxR family GNY17_12725 PF00072 Response regulator receiver domain GNY17_12730 PF02683 Cytochrome C biogenesis protein transmembrane region GNY17_12730 PF11412 Disulphide bond corrector protein DsbC GNY17_12735 PF03605 Anaerobic c4-dicarboxylate membrane transporter GNY17_12740 PF00206 Lyase GNY17_12740 PF10415 Fumarase C C-terminus GNY17_12745 PF04186 FxsA cytoplasmic membrane protein GNY17_12750 PF00588 SpoU rRNA Methylase family GNY17_12755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNY17_12755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNY17_12760 PF16527 Two-component sensor protein CpxA, periplasmic domain GNY17_12760 PF00512 His Kinase A (phospho-acceptor) domain GNY17_12760 PF00672 HAMP domain GNY17_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_12765 PF00072 Response regulator receiver domain GNY17_12765 PF00486 Transcriptional regulatory protein, C terminal GNY17_12770 PF07813 LTXXQ motif family protein GNY17_12775 PF01545 Cation efflux family GNY17_12775 PF16916 Dimerisation domain of Zinc Transporter GNY17_12780 PF00365 Phosphofructokinase GNY17_12785 PF01554 MatE GNY17_12790 PF00166 Chaperonin 10 Kd subunit GNY17_12795 PF00118 TCP-1/cpn60 chaperonin family GNY17_12805 PF02308 MgtC family GNY17_12810 PF01168 Alanine racemase, N-terminal domain GNY17_12810 PF00842 Alanine racemase, C-terminal domain GNY17_12820 PF04055 Radical SAM superfamily GNY17_12825 PF08207 Elongation factor P (EF-P) KOW-like domain GNY17_12825 PF01132 Elongation factor P (EF-P) OB domain GNY17_12825 PF09285 Elongation factor P, C-terminal GNY17_12835 PF02313 Fumarate reductase subunit D GNY17_12840 PF02300 Fumarate reductase subunit C GNY17_12845 PF13085 2Fe-2S iron-sulfur cluster binding domain GNY17_12845 PF13183 4Fe-4S dicluster domain GNY17_12850 PF00890 FAD binding domain GNY17_12850 PF02910 Fumarate reductase flavoprotein C-term GNY17_12860 PF00152 tRNA synthetases class II (D, K and N) GNY17_12870 PF08360 QacR-like protein, C-terminal region GNY17_12870 PF00440 Bacterial regulatory proteins, tetR family GNY17_12880 PF01551 Peptidase family M23 GNY17_12885 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_12885 PF06426 Serine acetyltransferase, N-terminal GNY17_12890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GNY17_12890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GNY17_12895 PF02556 Preprotein translocase subunit SecB GNY17_12900 PF00581 Rhodanese-like domain GNY17_12905 PF01676 Metalloenzyme superfamily GNY17_12905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GNY17_12950 PF00239 Resolvase, N terminal domain GNY17_12950 PF02796 Helix-turn-helix domain of resolvase GNY17_12955 PF00939 Sodium:sulfate symporter transmembrane region GNY17_12960 PF02666 Phosphatidylserine decarboxylase GNY17_12965 PF03193 RsgA GTPase GNY17_12970 PF00929 Exonuclease GNY17_13040 PF08331 Domain of unknown function (DUF1730) GNY17_13045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GNY17_13050 PF01520 N-acetylmuramoyl-L-alanine amidase GNY17_13055 PF08676 MutL C terminal dimerisation domain GNY17_13055 PF01119 DNA mismatch repair protein, C-terminal domain GNY17_13065 PF17209 Hfq protein GNY17_13070 PF01926 50S ribosome-binding GTPase GNY17_13070 PF16360 GTP-binding GTPase Middle Region GNY17_13070 PF13167 GTP-binding GTPase N-terminal GNY17_13075 PF01145 SPFH domain / Band 7 family GNY17_13075 PF12221 Bacterial membrane protein N terminal GNY17_13080 PF01145 SPFH domain / Band 7 family GNY17_13085 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GNY17_13090 PF00709 Adenylosuccinate synthetase GNY17_13100 PF08238 Sel1 repeat GNY17_13105 PF00042 Globin GNY17_13105 PF00970 Oxidoreductase FAD-binding domain GNY17_13105 PF00175 Oxidoreductase NAD-binding domain GNY17_13110 PF02082 Transcriptional regulator GNY17_13115 PF17876 Cold shock domain GNY17_13115 PF08206 Ribonuclease B OB domain GNY17_13115 PF00575 S1 RNA binding domain GNY17_13115 PF00773 RNB domain GNY17_13115 PF08461 Ribonuclease R winged-helix domain GNY17_13120 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNY17_13120 PF00588 SpoU rRNA Methylase family GNY17_13125 PF13419 Haloacid dehalogenase-like hydrolase GNY17_13130 PF00579 tRNA synthetases class I (W and Y) GNY17_13160 PF00117 Glutamine amidotransferase class-I GNY17_13165 PF00202 Aminotransferase class-III GNY17_13170 PF04958 Arginine N-succinyltransferase beta subunit GNY17_13175 PF00171 Aldehyde dehydrogenase family GNY17_13185 PF13545 Crp-like helix-turn-helix domain GNY17_13185 PF00027 Cyclic nucleotide-binding domain GNY17_13190 PF00485 Phosphoribulokinase / Uridine kinase family GNY17_13195 PF06794 Uncharacterised protein family (UPF0270) GNY17_13200 PF00561 alpha/beta hydrolase fold GNY17_13210 PF12848 ABC transporter GNY17_13210 PF00005 ABC transporter GNY17_13220 PF02525 Flavodoxin-like fold GNY17_13225 PF00999 Sodium/hydrogen exchanger family GNY17_13225 PF02254 TrkA-N domain GNY17_13235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_13245 PF01112 Asparaginase GNY17_13250 PF04102 SlyX GNY17_13260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_13260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GNY17_13265 PF13309 HTH domain GNY17_13265 PF08348 YheO-like PAS domain GNY17_13270 PF02635 DsrE/DsrF-like family GNY17_13275 PF02635 DsrE/DsrF-like family GNY17_13280 PF04077 DsrH like protein GNY17_13285 PF00164 Ribosomal protein S12/S23 GNY17_13290 PF00177 Ribosomal protein S7p/S5e GNY17_13295 PF00679 Elongation factor G C-terminus GNY17_13295 PF14492 Elongation Factor G, domain II GNY17_13295 PF03764 Elongation factor G, domain IV GNY17_13295 PF00009 Elongation factor Tu GTP binding domain GNY17_13295 PF03144 Elongation factor Tu domain 2 GNY17_13300 PF03143 Elongation factor Tu C-terminal domain GNY17_13300 PF00009 Elongation factor Tu GTP binding domain GNY17_13300 PF03144 Elongation factor Tu domain 2 GNY17_13305 PF04324 BFD-like [2Fe-2S] binding domain GNY17_13310 PF00210 Ferritin-like domain GNY17_13315 PF03949 Malic enzyme, NAD binding domain GNY17_13315 PF00390 Malic enzyme, N-terminal domain GNY17_13320 PF01340 Met Apo-repressor, MetJ GNY17_13325 PF01053 Cys/Met metabolism PLP-dependent enzyme GNY17_13330 PF00742 Homoserine dehydrogenase GNY17_13330 PF03447 Homoserine dehydrogenase, NAD binding domain GNY17_13330 PF00696 Amino acid kinase family GNY17_13335 PF02219 Methylenetetrahydrofolate reductase GNY17_13345 PF00311 Phosphoenolpyruvate carboxylase GNY17_13350 PF07687 Peptidase dimerisation domain GNY17_13350 PF01546 Peptidase family M20/M25/M40 GNY17_13355 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNY17_13355 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNY17_13360 PF00696 Amino acid kinase family GNY17_13365 PF00764 Arginosuccinate synthase GNY17_13370 PF00583 Acetyltransferase (GNAT) family GNY17_13370 PF14698 Argininosuccinate lyase C-terminal GNY17_13370 PF00206 Lyase GNY17_13385 PF08534 Redoxin GNY17_13385 PF00462 Glutaredoxin GNY17_13390 PF03466 LysR substrate binding domain GNY17_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_13395 PF17092 Penicillin-binding protein OB-like domain GNY17_13395 PF00905 Penicillin binding protein transpeptidase domain GNY17_13395 PF00912 Transglycosylase GNY17_13420 PF11741 AMIN domain GNY17_13420 PF00263 Bacterial type II and III secretion system protein GNY17_13420 PF03958 Bacterial type II/III secretion system short domain GNY17_13420 PF07660 Secretin and TonB N terminus short domain GNY17_13425 PF01202 Shikimate kinase GNY17_13430 PF01761 3-dehydroquinate synthase GNY17_13440 PF02086 D12 class N6 adenine-specific DNA methyltransferase GNY17_13445 PF00834 Ribulose-phosphate 3 epimerase family GNY17_13450 PF01250 Ribosomal protein S6 GNY17_13455 PF00436 Single-strand binding protein family GNY17_13460 PF01084 Ribosomal protein S18 GNY17_13465 PF03948 Ribosomal protein L9, C-terminal domain GNY17_13465 PF01281 Ribosomal protein L9, N-terminal domain GNY17_13475 PF03796 DnaB-like helicase C terminal domain GNY17_13475 PF00772 DnaB-like helicase N terminal domain GNY17_13480 PF01168 Alanine racemase, N-terminal domain GNY17_13480 PF00842 Alanine racemase, C-terminal domain GNY17_13490 PF01894 Uncharacterised protein family UPF0047 GNY17_13495 PF00342 Phosphoglucose isomerase GNY17_13505 PF01475 Ferric uptake regulator family GNY17_13515 PF01207 Dihydrouridine synthase (Dus) GNY17_13540 PF00667 FAD binding domain GNY17_13540 PF00175 Oxidoreductase NAD-binding domain GNY17_13540 PF00258 Flavodoxin GNY17_13545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNY17_13545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNY17_13550 PF01507 Phosphoadenosine phosphosulfate reductase family GNY17_13605 PF13358 DDE superfamily endonuclease GNY17_13615 PF00999 Sodium/hydrogen exchanger family GNY17_13620 PF02607 B12 binding domain GNY17_13620 PF02310 B12 binding domain GNY17_13620 PF02965 Vitamin B12 dependent methionine synthase, activation domain GNY17_13620 PF00809 Pterin binding enzyme GNY17_13620 PF02574 Homocysteine S-methyltransferase GNY17_13625 PF00696 Amino acid kinase family GNY17_13625 PF01842 ACT domain GNY17_13630 PF00266 Aminotransferase class-V GNY17_13640 PF00005 ABC transporter GNY17_13640 PF17755 UvrA DNA-binding domain GNY17_13640 PF17760 UvrA interaction domain GNY17_13645 PF00483 Nucleotidyl transferase GNY17_13650 PF00196 Bacterial regulatory proteins, luxR family GNY17_13655 PF00436 Single-strand binding protein family GNY17_13660 PF00990 Diguanylate cyclase, GGDEF domain GNY17_13660 PF17157 Gammaproteobacterial periplasmic sensor domain GNY17_13660 PF00563 EAL domain GNY17_13680 PF07660 Secretin and TonB N terminus short domain GNY17_13680 PF11741 AMIN domain GNY17_13680 PF03958 Bacterial type II/III secretion system short domain GNY17_13680 PF00263 Bacterial type II and III secretion system protein GNY17_13685 PF13401 AAA domain GNY17_13685 PF01471 Putative peptidoglycan binding domain GNY17_13695 PF00437 Type II/IV secretion system protein GNY17_13695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GNY17_13700 PF00482 Type II secretion system (T2SS), protein F GNY17_13710 PF07963 Prokaryotic N-terminal methylation motif GNY17_13710 PF00114 Pilin (bacterial filament) GNY17_13750 PF04085 rod shape-determining protein MreC GNY17_13755 PF04093 rod shape-determining protein MreD GNY17_13760 PF02545 Maf-like protein GNY17_13765 PF10150 Ribonuclease E/G family GNY17_13765 PF00575 S1 RNA binding domain GNY17_13770 PF13116 Protein of unknown function GNY17_13770 PF13502 AsmA-like C-terminal region GNY17_13775 PF00795 Carbon-nitrogen hydrolase GNY17_13780 PF01523 Putative modulator of DNA gyrase GNY17_13785 PF13638 PIN domain GNY17_13785 PF02562 PhoH-like protein GNY17_13790 PF18337 RapA N-terminal Tudor like domain GNY17_13790 PF18339 RapA N-terminal Tudor like domain 1 GNY17_13790 PF00176 SNF2 family N-terminal domain GNY17_13790 PF12137 RNA polymerase recycling family C-terminal GNY17_13790 PF00271 Helicase conserved C-terminal domain GNY17_13805 PF00849 RNA pseudouridylate synthase GNY17_13810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNY17_13810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNY17_13815 PF04751 Protein of unknown function (DUF615) GNY17_13820 PF01523 Putative modulator of DNA gyrase GNY17_13825 PF01769 Divalent cation transporter GNY17_13825 PF03448 MgtE intracellular N domain GNY17_13825 PF00571 CBS domain GNY17_13830 PF00381 PTS HPr component phosphorylation site GNY17_13835 PF03668 P-loop ATPase protein family GNY17_13840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_13845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GNY17_13850 PF00309 Sigma-54 factor, Activator interacting domain (AID) GNY17_13850 PF04963 Sigma-54 factor, core binding domain GNY17_13850 PF04552 Sigma-54, DNA binding domain GNY17_13855 PF00005 ABC transporter GNY17_13855 PF12399 Branched-chain amino acid ATP-binding cassette transporter GNY17_13860 PF03968 OstA-like protein GNY17_13870 PF01380 SIS domain GNY17_13870 PF00571 CBS domain GNY17_13875 PF01699 Sodium/calcium exchanger protein GNY17_13880 PF00005 ABC transporter GNY17_13885 PF02405 Permease MlaE GNY17_13890 PF02470 MlaD protein GNY17_13895 PF05494 MlaC protein GNY17_13905 PF01722 BolA-like protein GNY17_13910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNY17_13915 PF01553 Acyltransferase GNY17_13920 PF01042 Endoribonuclease L-PSP GNY17_13925 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GNY17_13925 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GNY17_13930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNY17_13930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNY17_13940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNY17_13940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNY17_13955 PF06877 Regulator of ribonuclease activity B GNY17_13965 PF00583 Acetyltransferase (GNAT) family GNY17_13975 PF00133 tRNA synthetases class I (I, L, M and V) GNY17_13975 PF08264 Anticodon-binding domain of tRNA GNY17_13975 PF10458 Valyl tRNA synthetase tRNA binding arm GNY17_13980 PF04364 DNA polymerase III chi subunit, HolC GNY17_13985 PF02789 Cytosol aminopeptidase family, N-terminal domain GNY17_13985 PF00883 Cytosol aminopeptidase family, catalytic domain GNY17_13990 PF03739 Lipopolysaccharide export system permease LptF/LptG GNY17_13995 PF03739 Lipopolysaccharide export system permease LptF/LptG GNY17_14005 PF10011 Predicted membrane protein (DUF2254) GNY17_14010 PF00106 short chain dehydrogenase GNY17_14025 PF00990 Diguanylate cyclase, GGDEF domain GNY17_14025 PF00563 EAL domain GNY17_14025 PF03707 Bacterial signalling protein N terminal repeat GNY17_14135 PF00589 Phage integrase family GNY17_14135 PF13356 Arm DNA-binding domain GNY17_14175 PF01522 Polysaccharide deacetylase GNY17_14180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_14185 PF02378 Phosphotransferase system, EIIC GNY17_14190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNY17_14195 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNY17_14195 PF02056 Family 4 glycosyl hydrolase GNY17_14200 PF04794 YdjC-like protein GNY17_14205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNY17_14205 PF00356 Bacterial regulatory proteins, lacI family GNY17_14210 PF00072 Response regulator receiver domain GNY17_14260 PF00171 Aldehyde dehydrogenase family GNY17_14290 PF00672 HAMP domain GNY17_14290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_14290 PF17200 Single Cache domain 2 GNY17_14330 PF01464 Transglycosylase SLT domain GNY17_14330 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GNY17_14335 PF04362 Bacterial Fe(2+) trafficking GNY17_14340 PF14815 NUDIX domain GNY17_14340 PF00633 Helix-hairpin-helix motif GNY17_14340 PF00730 HhH-GPD superfamily base excision DNA repair protein GNY17_14345 PF02390 Putative methyltransferase GNY17_14350 PF02086 D12 class N6 adenine-specific DNA methyltransferase GNY17_14355 PF04960 Glutaminase GNY17_14360 PF04055 Radical SAM superfamily GNY17_14360 PF06969 HemN C-terminal domain GNY17_14365 PF01725 Ham1 family GNY17_14375 PF02594 Uncharacterised ACR, YggU family COG1872 GNY17_14380 PF02325 YGGT family GNY17_14385 PF03807 NADP oxidoreductase coenzyme F420-dependent GNY17_14385 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNY17_14390 PF01168 Alanine racemase, N-terminal domain GNY17_14395 PF00437 Type II/IV secretion system protein GNY17_14400 PF00437 Type II/IV secretion system protein GNY17_14405 PF03652 Holliday junction resolvase GNY17_14410 PF02622 Uncharacterized ACR, COG1678 GNY17_14415 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GNY17_14415 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GNY17_14420 PF04452 RNA methyltransferase GNY17_14425 PF04231 Endonuclease I GNY17_14430 PF10263 SprT-like family GNY17_14430 PF17283 SprT-like zinc ribbon domain GNY17_14440 PF02772 S-adenosylmethionine synthetase, central domain GNY17_14440 PF00438 S-adenosylmethionine synthetase, N-terminal domain GNY17_14440 PF02773 S-adenosylmethionine synthetase, C-terminal domain GNY17_14450 PF02780 Transketolase, C-terminal domain GNY17_14450 PF02779 Transketolase, pyrimidine binding domain GNY17_14450 PF00456 Transketolase, thiamine diphosphate binding domain GNY17_14455 PF03466 LysR substrate binding domain GNY17_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_14460 PF00593 TonB dependent receptor GNY17_14460 PF07715 TonB-dependent Receptor Plug Domain GNY17_14465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNY17_14465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNY17_14470 PF00162 Phosphoglycerate kinase GNY17_14475 PF01116 Fructose-bisphosphate aldolase class-II GNY17_14480 PF05552 Conserved TM helix GNY17_14480 PF00924 Mechanosensitive ion channel GNY17_14485 PF04073 Aminoacyl-tRNA editing domain GNY17_14490 PF01810 LysE type translocator GNY17_14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_14495 PF03466 LysR substrate binding domain GNY17_14500 PF04402 Protein of unknown function (DUF541) GNY17_14505 PF01842 ACT domain GNY17_14505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNY17_14505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNY17_14510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GNY17_14515 PF01812 5-formyltetrahydrofolate cyclo-ligase family GNY17_14525 PF05164 Cell division protein ZapA GNY17_14535 PF03695 Uncharacterised protein family (UPF0149) GNY17_14540 PF01494 FAD binding domain GNY17_14545 PF01494 FAD binding domain GNY17_14560 PF01571 Aminomethyltransferase folate-binding domain GNY17_14565 PF03937 Flavinator of succinate dehydrogenase GNY17_14575 PF00890 FAD binding domain GNY17_14575 PF02910 Fumarate reductase flavoprotein C-term GNY17_14585 PF04542 Sigma-70 region 2 GNY17_14585 PF08281 Sigma-70, region 4 GNY17_14590 PF03873 Anti sigma-E protein RseA, C-terminal domain GNY17_14590 PF03872 Anti sigma-E protein RseA, N-terminal domain GNY17_14595 PF17188 MucB/RseB C-terminal domain GNY17_14595 PF03888 MucB/RseB N-terminal domain GNY17_14605 PF00679 Elongation factor G C-terminus GNY17_14605 PF00009 Elongation factor Tu GTP binding domain GNY17_14605 PF03144 Elongation factor Tu domain 2 GNY17_14605 PF06421 GTP-binding protein LepA C-terminus GNY17_14610 PF10502 Signal peptidase, peptidase S26 GNY17_14615 PF00035 Double-stranded RNA binding motif GNY17_14615 PF14622 Ribonuclease-III-like GNY17_14620 PF07650 KH domain GNY17_14620 PF01926 50S ribosome-binding GTPase GNY17_14625 PF02565 Recombination protein O C terminal GNY17_14625 PF11967 Recombination protein O N terminal GNY17_14630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GNY17_14635 PF01648 4'-phosphopantetheinyl transferase superfamily GNY17_14640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GNY17_14640 PF01627 Hpt domain GNY17_14640 PF00672 HAMP domain GNY17_14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_14640 PF00512 His Kinase A (phospho-acceptor) domain GNY17_14640 PF00072 Response regulator receiver domain GNY17_14645 PF05958 tRNA (Uracil-5-)-methyltransferase GNY17_14645 PF01938 TRAM domain GNY17_14655 PF04607 Region found in RelA / SpoT proteins GNY17_14655 PF13291 ACT domain GNY17_14655 PF02824 TGS domain GNY17_14660 PF03819 MazG nucleotide pyrophosphohydrolase domain GNY17_14665 PF00117 Glutamine amidotransferase class-I GNY17_14665 PF06418 CTP synthase N-terminus GNY17_14670 PF00113 Enolase, C-terminal TIM barrel domain GNY17_14670 PF03952 Enolase, N-terminal domain GNY17_14675 PF04977 Septum formation initiator GNY17_14680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GNY17_14685 PF02542 YgbB family GNY17_14690 PF01142 tRNA pseudouridine synthase D (TruD) GNY17_14695 PF01975 Survival protein SurE GNY17_14705 PF01476 LysM domain GNY17_14705 PF01551 Peptidase family M23 GNY17_14715 PF00488 MutS domain V GNY17_14715 PF01624 MutS domain I GNY17_14715 PF05188 MutS domain II GNY17_14715 PF05192 MutS domain III GNY17_14715 PF05190 MutS family domain IV GNY17_14720 PF02464 Competence-damaged protein GNY17_14725 PF00154 recA bacterial DNA recombination protein GNY17_14730 PF02631 RecX family GNY17_14735 PF01411 tRNA synthetases class II (A) GNY17_14735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNY17_14735 PF02272 DHHA1 domain GNY17_14740 PF00696 Amino acid kinase family GNY17_14740 PF13840 ACT domain GNY17_14740 PF01842 ACT domain GNY17_14745 PF02599 Global regulator protein family GNY17_14800 PF04277 Oxaloacetate decarboxylase, gamma chain GNY17_14805 PF02436 Conserved carboxylase domain GNY17_14805 PF00682 HMGL-like GNY17_14805 PF00364 Biotin-requiring enzyme GNY17_14810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GNY17_14815 PF00107 Zinc-binding dehydrogenase GNY17_14815 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_14820 PF09335 SNARE associated Golgi protein GNY17_14825 PF00675 Insulinase (Peptidase family M16) GNY17_14825 PF05193 Peptidase M16 inactive domain GNY17_14830 PF04262 Glutamate-cysteine ligase GNY17_14840 PF02664 S-Ribosylhomocysteinase (LuxS) GNY17_14845 PF03471 Transporter associated domain GNY17_14845 PF00571 CBS domain GNY17_14845 PF01595 Cyclin M transmembrane N-terminal domain GNY17_14850 PF01578 Cytochrome C assembly protein GNY17_14855 PF02978 Signal peptide binding domain GNY17_14855 PF02881 SRP54-type protein, helical bundle domain GNY17_14855 PF00448 SRP54-type protein, GTPase domain GNY17_14860 PF00886 Ribosomal protein S16 GNY17_14865 PF01782 RimM N-terminal domain GNY17_14865 PF05239 PRC-barrel domain GNY17_14870 PF01746 tRNA (Guanine-1)-methyltransferase GNY17_14875 PF01245 Ribosomal protein L19 GNY17_14880 PF03884 DNA gyrase inhibitor YacG GNY17_14885 PF07072 Cell division protein GNY17_14890 PF01121 Dephospho-CoA kinase GNY17_14895 PF06750 Bacterial Peptidase A24 N-terminal domain GNY17_14895 PF01478 Type IV leader peptidase family GNY17_14900 PF00482 Type II secretion system (T2SS), protein F GNY17_14905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GNY17_14905 PF00437 Type II/IV secretion system protein GNY17_14915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GNY17_14915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GNY17_14920 PF01510 N-acetylmuramoyl-L-alanine amidase GNY17_14925 PF07729 FCD domain GNY17_14925 PF00392 Bacterial regulatory proteins, gntR family GNY17_14930 PF00456 Transketolase, thiamine diphosphate binding domain GNY17_14930 PF17831 Pyruvate dehydrogenase E1 component middle domain GNY17_14935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNY17_14935 PF02817 e3 binding domain GNY17_14935 PF00364 Biotin-requiring enzyme GNY17_14940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNY17_14940 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_14945 PF00440 Bacterial regulatory proteins, tetR family GNY17_14950 PF00156 Phosphoribosyl transferase domain GNY17_14955 PF00484 Carbonic anhydrase GNY17_14960 PF01740 STAS domain GNY17_14960 PF00916 Sulfate permease family GNY17_14970 PF00005 ABC transporter GNY17_14975 PF01061 ABC-2 type transporter GNY17_14980 PF03279 Bacterial lipid A biosynthesis acyltransferase GNY17_14990 PF02569 Pantoate-beta-alanine ligase GNY17_14995 PF02548 Ketopantoate hydroxymethyltransferase GNY17_15000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GNY17_15005 PF12626 Polymerase A arginine-rich C-terminus GNY17_15005 PF12627 Probable RNA and SrmB- binding site of polymerase A GNY17_15005 PF01743 Poly A polymerase head domain GNY17_15015 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNY17_15025 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNY17_15030 PF17746 SfsA N-terminal OB domain GNY17_15030 PF03749 Sugar fermentation stimulation protein RE domain GNY17_15035 PF08482 ATP-dependent helicase C-terminal GNY17_15035 PF04408 Helicase associated domain (HA2) GNY17_15035 PF00270 DEAD/DEAH box helicase GNY17_15035 PF00271 Helicase conserved C-terminal domain GNY17_15040 PF00912 Transglycosylase GNY17_15040 PF00905 Penicillin binding protein transpeptidase domain GNY17_15040 PF14814 Bifunctional transglycosylase second domain GNY17_15045 PF01734 Patatin-like phospholipase GNY17_15050 PF11791 Aconitate B N-terminal domain GNY17_15050 PF00330 Aconitase family (aconitate hydratase) GNY17_15050 PF06434 Aconitate hydratase 2 N-terminus GNY17_15055 PF06062 Uncharacterised protein family (UPF0231) GNY17_15060 PF00543 Nitrogen regulatory protein P-II GNY17_15065 PF00909 Ammonium Transporter Family GNY17_15070 PF13416 Bacterial extracellular solute-binding protein GNY17_15080 PF08402 TOBE domain GNY17_15080 PF00005 ABC transporter GNY17_15085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNY17_15085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNY17_15085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNY17_15090 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GNY17_15090 PF06165 Glycosyltransferase family 36 GNY17_15095 PF02838 Glycosyl hydrolase family 20, domain 2 GNY17_15095 PF00728 Glycosyl hydrolase family 20, catalytic domain GNY17_15100 PF01869 BadF/BadG/BcrA/BcrD ATPase family GNY17_15110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_15110 PF00005 ABC transporter GNY17_15115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_15115 PF00005 ABC transporter GNY17_15120 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_15120 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_15125 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_15130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_15135 PF00512 His Kinase A (phospho-acceptor) domain GNY17_15135 PF00072 Response regulator receiver domain GNY17_15135 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_15140 PF08468 Methyltransferase small domain N-terminal GNY17_15140 PF05175 Methyltransferase small domain GNY17_15145 PF01594 AI-2E family transporter GNY17_15150 PF00202 Aminotransferase class-III GNY17_15155 PF01521 Iron-sulphur cluster biosynthesis GNY17_15165 PF00873 AcrB/AcrD/AcrF family GNY17_15170 PF01551 Peptidase family M23 GNY17_15170 PF08525 Opacity-associated protein A N-terminal motif GNY17_15170 PF01476 LysM domain GNY17_15175 PF00579 tRNA synthetases class I (W and Y) GNY17_15185 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GNY17_15190 PF13609 Gram-negative porin GNY17_15195 PF01272 Transcription elongation factor, GreA/GreB, C-term GNY17_15195 PF03449 Transcription elongation factor, N-terminal GNY17_15200 PF01985 CRS1 / YhbY (CRM) domain GNY17_15205 PF01728 FtsJ-like methyltransferase GNY17_15210 PF17862 AAA+ lid domain GNY17_15210 PF06480 FtsH Extracellular GNY17_15210 PF01434 Peptidase family M41 GNY17_15210 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_15215 PF00809 Pterin binding enzyme GNY17_15220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNY17_15220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNY17_15220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNY17_15220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNY17_15230 PF03840 Preprotein translocase SecG subunit GNY17_15245 PF02576 RimP N-terminal domain GNY17_15245 PF17384 RimP C-terminal SH3 domain GNY17_15250 PF08529 NusA N-terminal domain GNY17_15250 PF13184 NusA-like KH domain GNY17_15250 PF00575 S1 RNA binding domain GNY17_15255 PF00009 Elongation factor Tu GTP binding domain GNY17_15255 PF11987 Translation-initiation factor 2 GNY17_15255 PF08364 Bacterial translation initiation factor IF-2 associated region GNY17_15255 PF04760 Translation initiation factor IF-2, N-terminal region GNY17_15260 PF02033 Ribosome-binding factor A GNY17_15265 PF01509 TruB family pseudouridylate synthase (N terminal domain) GNY17_15265 PF16198 tRNA pseudouridylate synthase B C-terminal domain GNY17_15265 PF09157 Pseudouridine synthase II TruB, C-terminal GNY17_15270 PF00312 Ribosomal protein S15 GNY17_15275 PF01138 3' exoribonuclease family, domain 1 GNY17_15275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GNY17_15275 PF00013 KH domain GNY17_15275 PF00575 S1 RNA binding domain GNY17_15275 PF03725 3' exoribonuclease family, domain 2 GNY17_15280 PF13181 Tetratricopeptide repeat GNY17_15280 PF07719 Tetratricopeptide repeat GNY17_15290 PF01554 MatE GNY17_15305 PF00563 EAL domain GNY17_15305 PF03707 Bacterial signalling protein N terminal repeat GNY17_15305 PF00990 Diguanylate cyclase, GGDEF domain GNY17_15315 PF13508 Acetyltransferase (GNAT) domain GNY17_15335 PF00009 Elongation factor Tu GTP binding domain GNY17_15335 PF16658 Class II release factor RF3, C-terminal domain GNY17_15335 PF03144 Elongation factor Tu domain 2 GNY17_15345 PF01026 TatD related DNase GNY17_15350 PF01773 Na+ dependent nucleoside transporter N-terminus GNY17_15350 PF07662 Na+ dependent nucleoside transporter C-terminus GNY17_15350 PF07670 Nucleoside recognition GNY17_15355 PF01791 DeoC/LacD family aldolase GNY17_15360 PF00591 Glycosyl transferase family, a/b domain GNY17_15360 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GNY17_15360 PF02885 Glycosyl transferase family, helical bundle domain GNY17_15365 PF01676 Metalloenzyme superfamily GNY17_15370 PF01048 Phosphorylase superfamily GNY17_15380 PF18429 Domain of unknown function (DUF5609) GNY17_15390 PF18073 Rubredoxin metal binding domain GNY17_15395 PF03764 Elongation factor G, domain IV GNY17_15395 PF03144 Elongation factor Tu domain 2 GNY17_15395 PF14492 Elongation Factor G, domain II GNY17_15395 PF00009 Elongation factor Tu GTP binding domain GNY17_15395 PF00679 Elongation factor G C-terminus GNY17_15400 PF03466 LysR substrate binding domain GNY17_15400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_15410 PF00501 AMP-binding enzyme GNY17_15415 PF02805 Metal binding domain of Ada GNY17_15415 PF12833 Helix-turn-helix domain GNY17_15440 PF04972 BON domain GNY17_15440 PF00263 Bacterial type II and III secretion system protein GNY17_15440 PF13629 Pilus formation protein N terminal region GNY17_15470 PF00437 Type II/IV secretion system protein GNY17_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_15500 PF03466 LysR substrate binding domain GNY17_15505 PF13520 Amino acid permease GNY17_15510 PF04074 YhcH/YjgK/YiaL GNY17_15515 PF02929 Beta galactosidase small chain GNY17_15515 PF16353 Domain of unknown function(DUF4981) GNY17_15515 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GNY17_15515 PF00703 Glycosyl hydrolases family 2 GNY17_15515 PF02837 Glycosyl hydrolases family 2, sugar binding domain GNY17_15520 PF00356 Bacterial regulatory proteins, lacI family GNY17_15530 PF16363 GDP-mannose 4,6 dehydratase GNY17_15535 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GNY17_15535 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GNY17_15540 PF10509 Galactokinase galactose-binding signature GNY17_15540 PF08544 GHMP kinases C terminal GNY17_15540 PF00288 GHMP kinases N terminal domain GNY17_15545 PF01263 Aldose 1-epimerase GNY17_15550 PF00356 Bacterial regulatory proteins, lacI family GNY17_15565 PF00356 Bacterial regulatory proteins, lacI family GNY17_15570 PF01588 Putative tRNA binding domain GNY17_15585 PF01544 CorA-like Mg2+ transporter protein GNY17_15590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GNY17_15590 PF01266 FAD dependent oxidoreductase GNY17_15595 PF00455 DeoR C terminal sensor domain GNY17_15595 PF08220 DeoR-like helix-turn-helix domain GNY17_15600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNY17_15600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNY17_15605 PF00230 Major intrinsic protein GNY17_15620 PF07690 Major Facilitator Superfamily GNY17_15625 PF03009 Glycerophosphoryl diester phosphodiesterase family GNY17_15630 PF14602 Hexapeptide repeat of succinyl-transferase GNY17_15630 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GNY17_15635 PF07130 YebG protein GNY17_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_15640 PF03466 LysR substrate binding domain GNY17_15650 PF11893 Domain of unknown function (DUF3413) GNY17_15650 PF00884 Sulfatase GNY17_15655 PF17946 RecC C-terminal domain GNY17_15660 PF12705 PD-(D/E)XK nuclease superfamily GNY17_15660 PF00580 UvrD/REP helicase N-terminal domain GNY17_15660 PF13361 UvrD-like helicase C-terminal domain GNY17_15665 PF13538 UvrD-like helicase C-terminal domain GNY17_15675 PF00583 Acetyltransferase (GNAT) family GNY17_15675 PF00696 Amino acid kinase family GNY17_15685 PF03562 MltA specific insert domain GNY17_15685 PF06725 3D domain GNY17_15690 PF00899 ThiF family GNY17_15695 PF02657 Fe-S metabolism associated domain GNY17_15700 PF00990 Diguanylate cyclase, GGDEF domain GNY17_15700 PF17158 Membrane-associated sensor, integral membrane domain GNY17_15705 PF00266 Aminotransferase class-V GNY17_15710 PF01965 DJ-1/PfpI family GNY17_15715 PF02558 Ketopantoate reductase PanE/ApbA GNY17_15715 PF08546 Ketopantoate reductase PanE/ApbA C terminal GNY17_15720 PF03502 Nucleoside-specific channel-forming protein, Tsx GNY17_15745 PF04545 Sigma-70, region 4 GNY17_15745 PF04542 Sigma-70 region 2 GNY17_15755 PF07690 Major Facilitator Superfamily GNY17_15760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNY17_15765 PF03923 Uncharacterized lipoprotein GNY17_15765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GNY17_15770 PF05175 Methyltransferase small domain GNY17_15775 PF01722 BolA-like protein GNY17_15780 PF11973 NQRA C-terminal domain GNY17_15780 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GNY17_15785 PF03116 NQR2, RnfD, RnfE family GNY17_15790 PF04205 FMN-binding domain GNY17_15795 PF02508 Rnf-Nqr subunit, membrane protein GNY17_15800 PF02508 Rnf-Nqr subunit, membrane protein GNY17_15805 PF00175 Oxidoreductase NAD-binding domain GNY17_15805 PF00970 Oxidoreductase FAD-binding domain GNY17_15805 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_15810 PF02424 ApbE family GNY17_15825 PF11799 impB/mucB/samB family C-terminal domain GNY17_15825 PF00817 impB/mucB/samB family GNY17_15825 PF11798 IMS family HHH motif GNY17_15830 PF16124 RecQ zinc-binding GNY17_15830 PF00570 HRDC domain GNY17_15830 PF09382 RQC domain GNY17_15830 PF00271 Helicase conserved C-terminal domain GNY17_15830 PF00270 DEAD/DEAH box helicase GNY17_15835 PF03449 Transcription elongation factor, N-terminal GNY17_15835 PF01272 Transcription elongation factor, GreA/GreB, C-term GNY17_15850 PF00209 Sodium:neurotransmitter symporter family GNY17_15860 PF06786 Uncharacterised protein family (UPF0253) GNY17_15870 PF03129 Anticodon binding domain GNY17_15870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNY17_15870 PF04073 Aminoacyl-tRNA editing domain GNY17_15875 PF18389 TrmO C-terminal domain GNY17_15875 PF01980 tRNA-methyltransferase O GNY17_15880 PF01197 Ribosomal protein L31 GNY17_15885 PF00444 Ribosomal protein L36 GNY17_15895 PF03806 AbgT putative transporter family GNY17_15900 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GNY17_15925 PF04287 tRNA pseudouridine synthase C GNY17_15930 PF00849 RNA pseudouridylate synthase GNY17_15935 PF11944 Protein of unknown function (DUF3461) GNY17_15940 PF08335 GlnD PII-uridylyltransferase GNY17_15940 PF01966 HD domain GNY17_15940 PF01842 ACT domain GNY17_15940 PF01909 Nucleotidyltransferase domain GNY17_15945 PF00557 Metallopeptidase family M24 GNY17_15950 PF00318 Ribosomal protein S2 GNY17_15955 PF00889 Elongation factor TS GNY17_15960 PF00696 Amino acid kinase family GNY17_15965 PF01765 Ribosome recycling factor GNY17_15970 PF01255 Putative undecaprenyl diphosphate synthase GNY17_15980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GNY17_15980 PF13288 DXP reductoisomerase C-terminal domain GNY17_15980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GNY17_15985 PF17820 PDZ domain GNY17_15985 PF02163 Peptidase family M50 GNY17_15990 PF07244 Surface antigen variable number repeat GNY17_15990 PF01103 Surface antigen GNY17_15995 PF03938 Outer membrane protein (OmpH-like) GNY17_16000 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_16000 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GNY17_16005 PF07977 FabA-like domain GNY17_16010 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GNY17_16010 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_16015 PF02684 Lipid-A-disaccharide synthetase GNY17_16020 PF01351 Ribonuclease HII GNY17_16025 PF02811 PHP domain GNY17_16025 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNY17_16025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNY17_16025 PF14579 Helix-hairpin-helix motif GNY17_16025 PF01336 OB-fold nucleic acid binding domain GNY17_16030 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GNY17_16035 PF09179 TilS substrate binding domain GNY17_16035 PF11734 TilS substrate C-terminal domain GNY17_16035 PF01171 PP-loop family GNY17_16040 PF00034 Cytochrome c GNY17_16045 PF00543 Nitrogen regulatory protein P-II GNY17_16050 PF03372 Endonuclease/Exonuclease/phosphatase family GNY17_16060 PF01476 LysM domain GNY17_16060 PF01464 Transglycosylase SLT domain GNY17_16065 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNY17_16065 PF00753 Metallo-beta-lactamase superfamily GNY17_16070 PF08241 Methyltransferase domain GNY17_16075 PF00075 RNase H GNY17_16080 PF00929 Exonuclease GNY17_16090 PF01740 STAS domain GNY17_16090 PF00916 Sulfate permease family GNY17_16095 PF09317 Domain of unknown function (DUF1974) GNY17_16095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNY17_16095 PF02770 Acyl-CoA dehydrogenase, middle domain GNY17_16095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNY17_16100 PF13580 SIS domain GNY17_16105 PF13230 Glutamine amidotransferases class-II GNY17_16110 PF00551 Formyl transferase GNY17_16115 PF02769 AIR synthase related protein, C-terminal domain GNY17_16115 PF00586 AIR synthase related protein, N-terminal domain GNY17_16125 PF00860 Permease family GNY17_16140 PF03358 NADPH-dependent FMN reductase GNY17_16145 PF03960 ArsC family GNY17_16150 PF01435 Peptidase family M48 GNY17_16150 PF13181 Tetratricopeptide repeat GNY17_16160 PF01594 AI-2E family transporter GNY17_16165 PF00578 AhpC/TSA family GNY17_16200 PF01381 Helix-turn-helix GNY17_16215 PF00578 AhpC/TSA family GNY17_16245 PF01842 ACT domain GNY17_16250 PF00701 Dihydrodipicolinate synthetase family GNY17_16270 PF07687 Peptidase dimerisation domain GNY17_16270 PF01546 Peptidase family M20/M25/M40 GNY17_16275 PF03960 ArsC family GNY17_16300 PF11143 Protein of unknown function (DUF2919) GNY17_16305 PF04261 Dyp-type peroxidase family GNY17_16310 PF00669 Bacterial flagellin N-terminal helical region GNY17_16310 PF00700 Bacterial flagellin C-terminal helical region GNY17_16310 PF07196 Flagellin hook IN motif GNY17_16320 PF00669 Bacterial flagellin N-terminal helical region GNY17_16320 PF00700 Bacterial flagellin C-terminal helical region GNY17_16320 PF07196 Flagellin hook IN motif GNY17_16325 PF07196 Flagellin hook IN motif GNY17_16325 PF00669 Bacterial flagellin N-terminal helical region GNY17_16325 PF00700 Bacterial flagellin C-terminal helical region GNY17_16330 PF03646 FlaG protein GNY17_16335 PF07196 Flagellin hook IN motif GNY17_16335 PF07195 Flagellar hook-associated protein 2 C-terminus GNY17_16335 PF02465 Flagellar hook-associated protein 2 N-terminus GNY17_16345 PF02561 Flagellar protein FliS GNY17_16350 PF01590 GAF domain GNY17_16350 PF02954 Bacterial regulatory protein, Fis family GNY17_16350 PF00158 Sigma-54 interaction domain GNY17_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_16355 PF00512 His Kinase A (phospho-acceptor) domain GNY17_16360 PF00072 Response regulator receiver domain GNY17_16360 PF00158 Sigma-54 interaction domain GNY17_16360 PF02954 Bacterial regulatory protein, Fis family GNY17_16365 PF02049 Flagellar hook-basal body complex protein FliE GNY17_16370 PF01514 Secretory protein of YscJ/FliF family GNY17_16370 PF08345 Flagellar M-ring protein C-terminal GNY17_16375 PF14842 FliG N-terminal domain GNY17_16375 PF14841 FliG middle domain GNY17_16375 PF01706 FliG C-terminal domain GNY17_16385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_16385 PF18269 T3SS EscN ATPase C-terminal domain GNY17_16405 PF02154 Flagellar motor switch protein FliM GNY17_16405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNY17_16410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNY17_16415 PF04347 Flagellar biosynthesis protein, FliO GNY17_16420 PF00813 FliP family GNY17_16425 PF01313 Bacterial export proteins, family 3 GNY17_16430 PF01311 Bacterial export proteins, family 1 GNY17_16435 PF01312 FlhB HrpN YscU SpaS Family GNY17_16440 PF00771 FHIPEP family GNY17_16445 PF00448 SRP54-type protein, GTPase domain GNY17_16450 PF10609 NUBPL iron-transfer P-loop NTPase GNY17_16455 PF04545 Sigma-70, region 4 GNY17_16455 PF04542 Sigma-70 region 2 GNY17_16455 PF04539 Sigma-70 region 3 GNY17_16460 PF00072 Response regulator receiver domain GNY17_16465 PF04344 Chemotaxis phosphatase, CheZ GNY17_16470 PF01584 CheW-like domain GNY17_16470 PF02895 Signal transducing histidine kinase, homodimeric domain GNY17_16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_16470 PF01627 Hpt domain GNY17_16470 PF07194 P2 response regulator binding domain GNY17_16475 PF00072 Response regulator receiver domain GNY17_16475 PF01339 CheB methylesterase GNY17_16480 PF13614 AAA domain GNY17_16490 PF01584 CheW-like domain GNY17_16500 PF00005 ABC transporter GNY17_16505 PF03379 CcmB protein GNY17_16510 PF01578 Cytochrome C assembly protein GNY17_16515 PF04995 Heme exporter protein D (CcmD) GNY17_16520 PF03100 CcmE GNY17_16525 PF01578 Cytochrome C assembly protein GNY17_16525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GNY17_16530 PF08534 Redoxin GNY17_16535 PF03918 Cytochrome C biogenesis protein GNY17_16545 PF04333 MlaA lipoprotein GNY17_16550 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GNY17_16555 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GNY17_16565 PF04542 Sigma-70 region 2 GNY17_16565 PF08281 Sigma-70, region 4 GNY17_16570 PF00108 Thiolase, N-terminal domain GNY17_16570 PF02803 Thiolase, C-terminal domain GNY17_16575 PF00378 Enoyl-CoA hydratase/isomerase GNY17_16575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNY17_16575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNY17_16585 PF16187 Middle or third domain of peptidase_M16 GNY17_16585 PF05193 Peptidase M16 inactive domain GNY17_16585 PF00675 Insulinase (Peptidase family M16) GNY17_16590 PF00300 Histidine phosphatase superfamily (branch 1) GNY17_16595 PF01713 Smr domain GNY17_16600 PF05175 Methyltransferase small domain GNY17_16605 PF01264 Chorismate synthase GNY17_16610 PF03458 UPF0126 domain GNY17_16620 PF04315 Elongation factor P hydroxylase GNY17_16625 PF08891 YfcL protein GNY17_16635 PF03358 NADPH-dependent FMN reductase GNY17_16640 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GNY17_16640 PF01266 FAD dependent oxidoreductase GNY17_16645 PF02801 Beta-ketoacyl synthase, C-terminal domain GNY17_16645 PF00109 Beta-ketoacyl synthase, N-terminal domain GNY17_16650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNY17_16650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNY17_16650 PF11890 Domain of unknown function (DUF3410) GNY17_16655 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNY17_16655 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNY17_16665 PF01416 tRNA pseudouridine synthase GNY17_16670 PF01039 Carboxyl transferase domain GNY17_16670 PF17848 Acetyl-coA carboxylase zinc finger domain GNY17_16675 PF08245 Mur ligase middle domain GNY17_16675 PF02875 Mur ligase family, glutamate ligase domain GNY17_16680 PF05036 Sporulation related domain GNY17_16685 PF02674 Colicin V production protein GNY17_16690 PF00156 Phosphoribosyl transferase domain GNY17_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_16695 PF03466 LysR substrate binding domain GNY17_16700 PF00072 Response regulator receiver domain GNY17_16710 PF04304 Protein of unknown function (DUF454) GNY17_16715 PF00156 Phosphoribosyl transferase domain GNY17_16720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GNY17_16720 PF12170 DNA polymerase III tau subunit V interacting with alpha GNY17_16720 PF12169 DNA polymerase III subunits gamma and tau domain III GNY17_16725 PF02575 YbaB/EbfC DNA-binding family GNY17_16730 PF13662 Toprim domain GNY17_16730 PF02132 RecR protein GNY17_16735 PF00230 Major intrinsic protein GNY17_16745 PF01042 Endoribonuclease L-PSP GNY17_16750 PF03313 Serine dehydratase alpha chain GNY17_16760 PF03692 Putative zinc- or iron-chelating domain GNY17_16765 PF04226 Transglycosylase associated protein GNY17_16770 PF03692 Putative zinc- or iron-chelating domain GNY17_16775 PF05552 Conserved TM helix GNY17_16775 PF00924 Mechanosensitive ion channel GNY17_16780 PF03992 Antibiotic biosynthesis monooxygenase GNY17_16785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_16795 PF00245 Alkaline phosphatase GNY17_16815 PF13847 Methyltransferase domain GNY17_16820 PF00672 HAMP domain GNY17_16820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_16820 PF02743 Cache domain GNY17_16825 PF01263 Aldose 1-epimerase GNY17_16830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNY17_16830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNY17_16835 PF01641 SelR domain GNY17_16845 PF07023 Protein of unknown function (DUF1315) GNY17_16850 PF00710 Asparaginase, N-terminal GNY17_16850 PF17763 Glutaminase/Asparaginase C-terminal domain GNY17_16855 PF01343 Peptidase family S49 GNY17_16860 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_16860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNY17_16865 PF00881 Nitroreductase family GNY17_16870 PF01131 DNA topoisomerase GNY17_16870 PF01751 Toprim domain GNY17_16885 PF00106 short chain dehydrogenase GNY17_16890 PF00850 Histone deacetylase domain GNY17_16900 PF11893 Domain of unknown function (DUF3413) GNY17_16900 PF00884 Sulfatase GNY17_16905 PF07208 Protein of unknown function (DUF1414) GNY17_16910 PF04245 37-kD nucleoid-associated bacterial protein GNY17_16925 PF03553 Na+/H+ antiporter family GNY17_16930 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNY17_16930 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNY17_16935 PF00027 Cyclic nucleotide-binding domain GNY17_16935 PF00520 Ion transport protein GNY17_16940 PF01914 MarC family integral membrane protein GNY17_16945 PF00465 Iron-containing alcohol dehydrogenase GNY17_16945 PF00171 Aldehyde dehydrogenase family GNY17_16960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNY17_16960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNY17_16965 PF00462 Glutaredoxin GNY17_16975 PF03553 Na+/H+ antiporter family GNY17_16975 PF13726 Na+-H+ antiporter family GNY17_16980 PF00929 Exonuclease GNY17_16995 PF00691 OmpA family GNY17_16995 PF18393 MotY N-terminal domain GNY17_17000 PF10952 Protein of unknown function (DUF2753) GNY17_17005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_17010 PF00730 HhH-GPD superfamily base excision DNA repair protein GNY17_17010 PF00633 Helix-hairpin-helix motif GNY17_17010 PF10576 Iron-sulfur binding domain of endonuclease III GNY17_17015 PF02508 Rnf-Nqr subunit, membrane protein GNY17_17020 PF04205 FMN-binding domain GNY17_17025 PF03116 NQR2, RnfD, RnfE family GNY17_17030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GNY17_17030 PF12838 4Fe-4S dicluster domain GNY17_17030 PF13375 RnfC Barrel sandwich hybrid domain GNY17_17030 PF10531 SLBB domain GNY17_17035 PF04060 Putative Fe-S cluster GNY17_17040 PF02508 Rnf-Nqr subunit, membrane protein GNY17_17055 PF04851 Type III restriction enzyme, res subunit GNY17_17055 PF02151 UvrB/uvrC motif GNY17_17055 PF17757 UvrB interaction domain GNY17_17055 PF12344 Ultra-violet resistance protein B GNY17_17055 PF00271 Helicase conserved C-terminal domain GNY17_17060 PF02954 Bacterial regulatory protein, Fis family GNY17_17060 PF00072 Response regulator receiver domain GNY17_17060 PF00158 Sigma-54 interaction domain GNY17_17065 PF01627 Hpt domain GNY17_17070 PF01933 Uncharacterised protein family UPF0052 GNY17_17075 PF04055 Radical SAM superfamily GNY17_17075 PF06463 Molybdenum Cofactor Synthesis C GNY17_17080 PF00994 Probable molybdopterin binding domain GNY17_17085 PF01967 MoaC family GNY17_17090 PF02597 ThiS family GNY17_17095 PF02391 MoaE protein GNY17_17100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_17105 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_17110 PF12911 N-terminal TM domain of oligopeptide transport permease C GNY17_17110 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_17115 PF00005 ABC transporter GNY17_17115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_17120 PF00005 ABC transporter GNY17_17120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_17125 PF13409 Glutathione S-transferase, N-terminal domain GNY17_17135 PF13194 Domain of unknown function (DUF4010) GNY17_17140 PF01515 Phosphate acetyl/butaryl transferase GNY17_17140 PF07085 DRTGG domain GNY17_17145 PF00871 Acetokinase family GNY17_17150 PF04217 Protein of unknown function, DUF412 GNY17_17160 PF02653 Branched-chain amino acid transport system / permease component GNY17_17165 PF00005 ABC transporter GNY17_17170 PF00128 Alpha amylase, catalytic domain GNY17_17170 PF02903 Alpha amylase, N-terminal ig-like domain GNY17_17175 PF00072 Response regulator receiver domain GNY17_17175 PF00990 Diguanylate cyclase, GGDEF domain GNY17_17180 PF01207 Dihydrouridine synthase (Dus) GNY17_17185 PF02810 SEC-C motif GNY17_17185 PF03695 Uncharacterised protein family (UPF0149) GNY17_17190 PF02600 Disulfide bond formation protein DsbB GNY17_17195 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GNY17_17200 PF00392 Bacterial regulatory proteins, gntR family GNY17_17200 PF07840 FadR C-terminal domain GNY17_17210 PF09334 tRNA synthetases class I (M) GNY17_17210 PF01588 Putative tRNA binding domain GNY17_17215 PF10609 NUBPL iron-transfer P-loop NTPase GNY17_17220 PF00485 Phosphoribulokinase / Uridine kinase family GNY17_17230 PF12557 Cob(I)alamin adenosyltransferase N terminal GNY17_17230 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GNY17_17235 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNY17_17240 PF01740 STAS domain GNY17_17240 PF00916 Sulfate permease family GNY17_17245 PF12111 Polyribonucleotide phosphorylase C terminal GNY17_17245 PF00575 S1 RNA binding domain GNY17_17245 PF10150 Ribonuclease E/G family GNY17_17250 PF00849 RNA pseudouridylate synthase GNY17_17250 PF01479 S4 domain GNY17_17255 PF02545 Maf-like protein GNY17_17260 PF02620 Large ribosomal RNA subunit accumulation protein YceD GNY17_17265 PF01783 Ribosomal L32p protein family GNY17_17270 PF02504 Fatty acid synthesis protein GNY17_17275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNY17_17275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNY17_17280 PF00698 Acyl transferase domain GNY17_17290 PF00550 Phosphopantetheine attachment site GNY17_17295 PF00109 Beta-ketoacyl synthase, N-terminal domain GNY17_17295 PF02801 Beta-ketoacyl synthase, C-terminal domain GNY17_17300 PF01063 Amino-transferase class IV GNY17_17305 PF02618 YceG-like family GNY17_17310 PF02223 Thymidylate kinase GNY17_17315 PF09115 DNA polymerase III, delta subunit, C terminal GNY17_17320 PF01026 TatD related DNase GNY17_17325 PF02378 Phosphotransferase system, EIIC GNY17_17325 PF00367 phosphotransferase system, EIIB GNY17_17345 PF00209 Sodium:neurotransmitter symporter family GNY17_17360 PF01734 Patatin-like phospholipase GNY17_17365 PF02887 Pyruvate kinase, alpha/beta domain GNY17_17365 PF00224 Pyruvate kinase, barrel domain GNY17_17370 PF00480 ROK family GNY17_17375 PF00072 Response regulator receiver domain GNY17_17375 PF01584 CheW-like domain GNY17_17380 PF01336 OB-fold nucleic acid binding domain GNY17_17380 PF14579 Helix-hairpin-helix motif GNY17_17380 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNY17_17380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNY17_17380 PF02811 PHP domain GNY17_17395 PF00106 short chain dehydrogenase GNY17_17400 PF01343 Peptidase family S49 GNY17_17400 PF08496 Peptidase family S49 N-terminal GNY17_17405 PF02224 Cytidylate kinase GNY17_17410 PF00575 S1 RNA binding domain GNY17_17415 PF00216 Bacterial DNA-binding protein GNY17_17420 PF06305 Lipopolysaccharide assembly protein A domain GNY17_17425 PF18073 Rubredoxin metal binding domain GNY17_17430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNY17_17435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_17445 PF01370 NAD dependent epimerase/dehydratase family GNY17_17450 PF00535 Glycosyl transferase family 2 GNY17_17460 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GNY17_17470 PF02470 MlaD protein GNY17_17475 PF04403 Paraquat-inducible protein A GNY17_17480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNY17_17485 PF00034 Cytochrome c GNY17_17490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_17490 PF01568 Molydopterin dinucleotide binding domain GNY17_17490 PF00384 Molybdopterin oxidoreductase GNY17_17495 PF03916 Polysulphide reductase, NrfD GNY17_17500 PF13247 4Fe-4S dicluster domain GNY17_17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_17505 PF00512 His Kinase A (phospho-acceptor) domain GNY17_17510 PF00072 Response regulator receiver domain GNY17_17510 PF00196 Bacterial regulatory proteins, luxR family GNY17_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_17515 PF03466 LysR substrate binding domain GNY17_17525 PF11412 Disulphide bond corrector protein DsbC GNY17_17525 PF02683 Cytochrome C biogenesis protein transmembrane region GNY17_17530 PF00085 Thioredoxin GNY17_17545 PF01938 TRAM domain GNY17_17545 PF05958 tRNA (Uracil-5-)-methyltransferase GNY17_17560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_17570 PF00005 ABC transporter GNY17_17570 PF02687 FtsX-like permease family GNY17_17570 PF12704 MacB-like periplasmic core domain GNY17_17575 PF00005 ABC transporter GNY17_17575 PF12704 MacB-like periplasmic core domain GNY17_17575 PF02687 FtsX-like permease family GNY17_17580 PF12704 MacB-like periplasmic core domain GNY17_17580 PF00005 ABC transporter GNY17_17580 PF02687 FtsX-like permease family GNY17_17585 PF00857 Isochorismatase family GNY17_17590 PF02311 AraC-like ligand binding domain GNY17_17590 PF12833 Helix-turn-helix domain GNY17_17600 PF08267 Cobalamin-independent synthase, N-terminal domain GNY17_17600 PF01717 Cobalamin-independent synthase, Catalytic domain GNY17_17610 PF00529 HlyD membrane-fusion protein of T1SS GNY17_17610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_17615 PF03466 LysR substrate binding domain GNY17_17635 PF00512 His Kinase A (phospho-acceptor) domain GNY17_17635 PF00672 HAMP domain GNY17_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_17640 PF00072 Response regulator receiver domain GNY17_17640 PF00486 Transcriptional regulatory protein, C terminal GNY17_17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_17650 PF00672 HAMP domain GNY17_17655 PF08497 Radical SAM N-terminal GNY17_17655 PF04055 Radical SAM superfamily GNY17_17655 PF11842 Domain of unknown function (DUF3362) GNY17_17660 PF00563 EAL domain GNY17_17660 PF01590 GAF domain GNY17_17660 PF00360 Phytochrome region GNY17_17660 PF00990 Diguanylate cyclase, GGDEF domain GNY17_17675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_17675 PF03466 LysR substrate binding domain GNY17_17685 PF08267 Cobalamin-independent synthase, N-terminal domain GNY17_17685 PF01717 Cobalamin-independent synthase, Catalytic domain GNY17_17695 PF03795 YCII-related domain GNY17_17700 PF03061 Thioesterase superfamily GNY17_17705 PF04279 Intracellular septation protein A GNY17_17715 PF00072 Response regulator receiver domain GNY17_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_17720 PF17327 Acyl homoserine lactone synthase GNY17_17725 PF00375 Sodium:dicarboxylate symporter family GNY17_17735 PF13193 AMP-binding enzyme C-terminal domain GNY17_17735 PF00501 AMP-binding enzyme GNY17_17740 PF13545 Crp-like helix-turn-helix domain GNY17_17740 PF00027 Cyclic nucleotide-binding domain GNY17_17750 PF00290 Tryptophan synthase alpha chain GNY17_17755 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_17760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GNY17_17760 PF00218 Indole-3-glycerol phosphate synthase GNY17_17765 PF00591 Glycosyl transferase family, a/b domain GNY17_17765 PF02885 Glycosyl transferase family, helical bundle domain GNY17_17770 PF00117 Glutamine amidotransferase class-I GNY17_17775 PF04715 Anthranilate synthase component I, N terminal region GNY17_17775 PF00425 chorismate binding enzyme GNY17_17780 PF08056 Tryptophan operon leader peptide GNY17_17785 PF02811 PHP domain GNY17_17790 PF01300 Telomere recombination GNY17_17800 PF00849 RNA pseudouridylate synthase GNY17_17800 PF01479 S4 domain GNY17_17810 PF04269 Protein of unknown function, DUF440 GNY17_17815 PF01132 Elongation factor P (EF-P) OB domain GNY17_17815 PF08207 Elongation factor P (EF-P) KOW-like domain GNY17_17815 PF09285 Elongation factor P, C-terminal GNY17_17825 PF00136 DNA polymerase family B GNY17_17825 PF03104 DNA polymerase family B, exonuclease domain GNY17_17830 PF00072 Response regulator receiver domain GNY17_17830 PF00196 Bacterial regulatory proteins, luxR family GNY17_17835 PF08459 UvrC Helix-hairpin-helix N-terminal GNY17_17835 PF01541 GIY-YIG catalytic domain GNY17_17835 PF02151 UvrB/uvrC motif GNY17_17840 PF01066 CDP-alcohol phosphatidyltransferase GNY17_17865 PF00202 Aminotransferase class-III GNY17_17870 PF16653 Saccharopine dehydrogenase C-terminal domain GNY17_17870 PF03435 Saccharopine dehydrogenase NADP binding domain GNY17_17875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNY17_17890 PF00994 Probable molybdopterin binding domain GNY17_17900 PF00268 Ribonucleotide reductase, small chain GNY17_17905 PF03477 ATP cone domain GNY17_17905 PF02867 Ribonucleotide reductase, barrel domain GNY17_17905 PF00317 Ribonucleotide reductase, all-alpha domain GNY17_17915 PF03989 DNA gyrase C-terminal domain, beta-propeller GNY17_17915 PF00521 DNA gyrase/topoisomerase IV, subunit A GNY17_17930 PF02335 Cytochrome c552 GNY17_17940 PF13247 4Fe-4S dicluster domain GNY17_17945 PF03916 Polysulphide reductase, NrfD GNY17_17950 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GNY17_17950 PF01578 Cytochrome C assembly protein GNY17_17955 PF08534 Redoxin GNY17_17960 PF03918 Cytochrome C biogenesis protein GNY17_17970 PF00925 GTP cyclohydrolase II GNY17_17995 PF03734 L,D-transpeptidase catalytic domain GNY17_17995 PF01471 Putative peptidoglycan binding domain GNY17_18000 PF05951 Bacterial protein of unknown function (DUF882) GNY17_18005 PF00753 Metallo-beta-lactamase superfamily GNY17_18020 PF03480 Bacterial extracellular solute-binding protein, family 7 GNY17_18030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNY17_18035 PF07730 Histidine kinase GNY17_18035 PF17200 Single Cache domain 2 GNY17_18040 PF00196 Bacterial regulatory proteins, luxR family GNY17_18040 PF00072 Response regulator receiver domain GNY17_18045 PF01047 MarR family GNY17_18060 PF02233 NAD(P) transhydrogenase beta subunit GNY17_18065 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GNY17_18065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNY17_18065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNY17_18080 PF00072 Response regulator receiver domain GNY17_18080 PF00990 Diguanylate cyclase, GGDEF domain GNY17_18090 PF00563 EAL domain GNY17_18090 PF00360 Phytochrome region GNY17_18090 PF00990 Diguanylate cyclase, GGDEF domain GNY17_18090 PF01590 GAF domain GNY17_18100 PF00005 ABC transporter GNY17_18100 PF03459 TOBE domain GNY17_18105 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_18115 PF07685 CobB/CobQ-like glutamine amidotransferase domain GNY17_18120 PF04076 Bacterial OB fold (BOF) protein GNY17_18130 PF18030 RimK PreATP-grasp domain GNY17_18130 PF08443 RimK-like ATP-grasp domain GNY17_18135 PF00155 Aminotransferase class I and II GNY17_18140 PF12833 Helix-turn-helix domain GNY17_18150 PF01554 MatE GNY17_18160 PF13597 Anaerobic ribonucleoside-triphosphate reductase GNY17_18160 PF03477 ATP cone domain GNY17_18170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_18175 PF00873 AcrB/AcrD/AcrF family GNY17_18185 PF04143 Sulphur transport GNY17_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_18200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNY17_18205 PF00384 Molybdopterin oxidoreductase GNY17_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_18215 PF03466 LysR substrate binding domain GNY17_18220 PF02634 FdhD/NarQ family GNY17_18225 PF07690 Major Facilitator Superfamily GNY17_18230 PF00196 Bacterial regulatory proteins, luxR family GNY17_18230 PF00072 Response regulator receiver domain GNY17_18235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_18235 PF05231 MASE1 GNY17_18235 PF07730 Histidine kinase GNY17_18240 PF07690 Major Facilitator Superfamily GNY17_18245 PF01238 Phosphomannose isomerase type I GNY17_18265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNY17_18265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNY17_18270 PF00085 Thioredoxin GNY17_18275 PF07690 Major Facilitator Superfamily GNY17_18285 PF01554 MatE GNY17_18290 PF11756 Nitrous oxide-stimulated promoter GNY17_18305 PF00593 TonB dependent receptor GNY17_18305 PF07715 TonB-dependent Receptor Plug Domain GNY17_18315 PF03605 Anaerobic c4-dicarboxylate membrane transporter GNY17_18330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNY17_18330 PF14824 Sirohaem biosynthesis protein central GNY17_18330 PF10414 Sirohaem synthase dimerisation region GNY17_18335 PF01226 Formate/nitrite transporter GNY17_18340 PF13806 Rieske-like [2Fe-2S] domain GNY17_18345 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_18345 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNY17_18345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNY17_18345 PF04324 BFD-like [2Fe-2S] binding domain GNY17_18345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNY17_18350 PF01272 Transcription elongation factor, GreA/GreB, C-term GNY17_18350 PF14760 Rnk N-terminus GNY17_18390 PF13462 Thioredoxin GNY17_18390 PF06965 Na+/H+ antiporter 1 GNY17_18415 PF09154 Domain of unknown function (DUF1939) GNY17_18415 PF00128 Alpha amylase, catalytic domain GNY17_18430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_18430 PF00672 HAMP domain GNY17_18435 PF01168 Alanine racemase, N-terminal domain GNY17_18435 PF00842 Alanine racemase, C-terminal domain GNY17_18455 PF09330 D-lactate dehydrogenase, membrane binding GNY17_18455 PF01565 FAD binding domain GNY17_18460 PF03466 LysR substrate binding domain GNY17_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_18480 PF05762 VWA domain containing CoxE-like protein GNY17_18485 PF17868 AAA lid domain GNY17_18485 PF12592 Protein of unknown function (DUF3763) GNY17_18485 PF07728 AAA domain (dynein-related subfamily) GNY17_18495 PF01212 Beta-eliminating lyase GNY17_18500 PF00034 Cytochrome c GNY17_18510 PF03606 C4-dicarboxylate anaerobic carrier GNY17_18520 PF07690 Major Facilitator Superfamily GNY17_18530 PF08212 Lipocalin-like domain GNY17_18550 PF13476 AAA domain GNY17_18555 PF00149 Calcineurin-like phosphoesterase GNY17_18555 PF12320 Type 5 capsule protein repressor C-terminal domain GNY17_18570 PF04717 Type VI secretion system, phage-baseplate injector GNY17_18570 PF16671 Actin cross-linking domain GNY17_18580 PF10431 C-terminal, D2-small domain, of ClpB protein GNY17_18580 PF17871 AAA lid domain GNY17_18580 PF07724 AAA domain (Cdc48 subfamily) GNY17_18580 PF00004 ATPase family associated with various cellular activities (AAA) GNY17_18640 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNY17_18640 PF00691 OmpA family GNY17_18660 PF03793 PASTA domain GNY17_18660 PF00069 Protein kinase domain GNY17_18685 PF00072 Response regulator receiver domain GNY17_18685 PF00211 Adenylate and Guanylate cyclase catalytic domain GNY17_18700 PF00440 Bacterial regulatory proteins, tetR family GNY17_18700 PF08361 MAATS-type transcriptional repressor, C-terminal region GNY17_18715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNY17_18715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNY17_18715 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_18715 PF04324 BFD-like [2Fe-2S] binding domain GNY17_18715 PF13806 Rieske-like [2Fe-2S] domain GNY17_18715 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNY17_18720 PF00005 ABC transporter GNY17_18725 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_18730 PF00005 ABC transporter GNY17_18740 PF03861 ANTAR domain GNY17_18740 PF08376 Nitrate and nitrite sensing GNY17_18745 PF01738 Dienelactone hydrolase family GNY17_18755 PF02885 Glycosyl transferase family, helical bundle domain GNY17_18755 PF00591 Glycosyl transferase family, a/b domain GNY17_18765 PF00384 Molybdopterin oxidoreductase GNY17_18765 PF01568 Molydopterin dinucleotide binding domain GNY17_18765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_18775 PF03222 Tryptophan/tyrosine permease family GNY17_18785 PF00072 Response regulator receiver domain GNY17_18785 PF00990 Diguanylate cyclase, GGDEF domain GNY17_18795 PF00082 Subtilase family GNY17_18795 PF01483 Proprotein convertase P-domain GNY17_18805 PF00245 Alkaline phosphatase GNY17_18820 PF00486 Transcriptional regulatory protein, C terminal GNY17_18820 PF00072 Response regulator receiver domain GNY17_18840 PF01048 Phosphorylase superfamily GNY17_18845 PF04973 Nicotinamide mononucleotide transporter GNY17_18855 PF00356 Bacterial regulatory proteins, lacI family GNY17_18860 PF00294 pfkB family carbohydrate kinase GNY17_18865 PF13407 Periplasmic binding protein domain GNY17_18870 PF02653 Branched-chain amino acid transport system / permease component GNY17_18875 PF00005 ABC transporter GNY17_18880 PF05025 RbsD / FucU transport protein family GNY17_18885 PF00990 Diguanylate cyclase, GGDEF domain GNY17_18885 PF00563 EAL domain GNY17_18890 PF01048 Phosphorylase superfamily GNY17_18935 PF04116 Fatty acid hydroxylase superfamily GNY17_18950 PF00072 Response regulator receiver domain GNY17_18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_18950 PF00512 His Kinase A (phospho-acceptor) domain GNY17_18950 PF09308 LuxQ, periplasmic GNY17_18955 PF03150 Di-haem cytochrome c peroxidase GNY17_18955 PF00034 Cytochrome c GNY17_18970 PF00563 EAL domain GNY17_18970 PF00990 Diguanylate cyclase, GGDEF domain GNY17_18970 PF13188 PAS domain GNY17_18970 PF03707 Bacterial signalling protein N terminal repeat GNY17_18980 PF16200 C-terminal region of band_7 GNY17_18980 PF01145 SPFH domain / Band 7 family GNY17_18990 PF00881 Nitroreductase family GNY17_18995 PF00571 CBS domain GNY17_18995 PF00005 ABC transporter GNY17_19000 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_19005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNY17_19010 PF00732 GMC oxidoreductase GNY17_19010 PF05199 GMC oxidoreductase GNY17_19015 PF00171 Aldehyde dehydrogenase family GNY17_19020 PF13977 BetI-type transcriptional repressor, C-terminal GNY17_19020 PF00440 Bacterial regulatory proteins, tetR family GNY17_19025 PF17151 Periplasmic sensor domain GNY17_19025 PF00990 Diguanylate cyclase, GGDEF domain GNY17_19040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNY17_19040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNY17_19050 PF00378 Enoyl-CoA hydratase/isomerase GNY17_19055 PF02770 Acyl-CoA dehydrogenase, middle domain GNY17_19055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNY17_19055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNY17_19060 PF00171 Aldehyde dehydrogenase family GNY17_19065 PF00108 Thiolase, N-terminal domain GNY17_19065 PF02803 Thiolase, C-terminal domain GNY17_19070 PF00376 MerR family regulatory protein GNY17_19070 PF09278 MerR, DNA binding GNY17_19075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNY17_19075 PF02770 Acyl-CoA dehydrogenase, middle domain GNY17_19075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNY17_19080 PF01039 Carboxyl transferase domain GNY17_19085 PF00378 Enoyl-CoA hydratase/isomerase GNY17_19090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNY17_19090 PF00289 Biotin carboxylase, N-terminal domain GNY17_19090 PF02785 Biotin carboxylase C-terminal domain GNY17_19090 PF00364 Biotin-requiring enzyme GNY17_19095 PF00682 HMGL-like GNY17_19100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GNY17_19100 PF00512 His Kinase A (phospho-acceptor) domain GNY17_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_19100 PF01627 Hpt domain GNY17_19100 PF00072 Response regulator receiver domain GNY17_19100 PF00672 HAMP domain GNY17_19115 PF12794 Mechanosensitive ion channel inner membrane domain 1 GNY17_19115 PF12795 Mechanosensitive ion channel porin domain GNY17_19115 PF00924 Mechanosensitive ion channel GNY17_19125 PF12464 Maltose acetyltransferase GNY17_19125 PF14602 Hexapeptide repeat of succinyl-transferase GNY17_19130 PF00392 Bacterial regulatory proteins, gntR family GNY17_19130 PF00155 Aminotransferase class I and II GNY17_19135 PF01654 Cytochrome bd terminal oxidase subunit I GNY17_19140 PF02322 Cytochrome bd terminal oxidase subunit II GNY17_19150 PF02567 Phenazine biosynthesis-like protein GNY17_19155 PF02627 Carboxymuconolactone decarboxylase family GNY17_19160 PF13411 MerR HTH family regulatory protein GNY17_19170 PF00034 Cytochrome c GNY17_19180 PF05724 Thiopurine S-methyltransferase (TPMT) GNY17_19185 PF00501 AMP-binding enzyme GNY17_19185 PF14535 AMP-binding enzyme C-terminal domain GNY17_19190 PF00005 ABC transporter GNY17_19215 PF12399 Branched-chain amino acid ATP-binding cassette transporter GNY17_19215 PF00005 ABC transporter GNY17_19230 PF01012 Electron transfer flavoprotein domain GNY17_19235 PF01012 Electron transfer flavoprotein domain GNY17_19235 PF00766 Electron transfer flavoprotein FAD-binding domain GNY17_19240 PF00501 AMP-binding enzyme GNY17_19240 PF13193 AMP-binding enzyme C-terminal domain GNY17_19245 PF00478 IMP dehydrogenase / GMP reductase domain GNY17_19250 PF01256 Carbohydrate kinase GNY17_19250 PF03853 YjeF-related protein N-terminus GNY17_19260 PF00072 Response regulator receiver domain GNY17_19265 PF00248 Aldo/keto reductase family GNY17_19280 PF00654 Voltage gated chloride channel GNY17_19290 PF01566 Natural resistance-associated macrophage protein GNY17_19295 PF01227 GTP cyclohydrolase I GNY17_19300 PF03453 MoeA N-terminal region (domain I and II) GNY17_19300 PF03454 MoeA C-terminal region (domain IV) GNY17_19300 PF00994 Probable molybdopterin binding domain GNY17_19305 PF00899 ThiF family GNY17_19325 PF00581 Rhodanese-like domain GNY17_19330 PF00990 Diguanylate cyclase, GGDEF domain GNY17_19330 PF03707 Bacterial signalling protein N terminal repeat GNY17_19330 PF00563 EAL domain GNY17_19335 PF08329 Chitinase A, N-terminal domain GNY17_19335 PF00704 Glycosyl hydrolases family 18 GNY17_19350 PF00923 Transaldolase/Fructose-6-phosphate aldolase GNY17_19355 PF02780 Transketolase, C-terminal domain GNY17_19355 PF00456 Transketolase, thiamine diphosphate binding domain GNY17_19355 PF02779 Transketolase, pyrimidine binding domain GNY17_19360 PF08447 PAS fold GNY17_19360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_19370 PF07690 Major Facilitator Superfamily GNY17_19375 PF00793 DAHP synthetase I family GNY17_19380 PF00691 OmpA family GNY17_19380 PF01389 OmpA-like transmembrane domain GNY17_19385 PF13419 Haloacid dehalogenase-like hydrolase GNY17_19390 PF00472 RF-1 domain GNY17_19395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_19395 PF12729 Four helix bundle sensory module for signal transduction GNY17_19395 PF00672 HAMP domain GNY17_19400 PF00873 AcrB/AcrD/AcrF family GNY17_19405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_19410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNY17_19415 PF01546 Peptidase family M20/M25/M40 GNY17_19415 PF07687 Peptidase dimerisation domain GNY17_19430 PF00196 Bacterial regulatory proteins, luxR family GNY17_19430 PF00072 Response regulator receiver domain GNY17_19435 PF00672 HAMP domain GNY17_19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_19435 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GNY17_19435 PF07730 Histidine kinase GNY17_19440 PF12838 4Fe-4S dicluster domain GNY17_19440 PF13187 4Fe-4S dicluster domain GNY17_19450 PF01568 Molydopterin dinucleotide binding domain GNY17_19450 PF00384 Molybdopterin oxidoreductase GNY17_19450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_19455 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GNY17_19460 PF03264 NapC/NirT cytochrome c family, N-terminal region GNY17_19470 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GNY17_19470 PF00561 alpha/beta hydrolase fold GNY17_19480 PF00108 Thiolase, N-terminal domain GNY17_19480 PF02803 Thiolase, C-terminal domain GNY17_19485 PF00106 short chain dehydrogenase GNY17_19500 PF02355 Protein export membrane protein GNY17_19500 PF07549 SecD/SecF GG Motif GNY17_19505 PF02355 Protein export membrane protein GNY17_19505 PF07549 SecD/SecF GG Motif GNY17_19505 PF13721 SecD export protein N-terminal TM region GNY17_19530 PF01037 Lrp/AsnC ligand binding domain GNY17_19550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_19550 PF00529 HlyD membrane-fusion protein of T1SS GNY17_19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_19560 PF00512 His Kinase A (phospho-acceptor) domain GNY17_19560 PF09308 LuxQ, periplasmic GNY17_19560 PF00072 Response regulator receiver domain GNY17_19565 PF13407 Periplasmic binding protein domain GNY17_19570 PF01541 GIY-YIG catalytic domain GNY17_19575 PF04337 Protein of unknown function, DUF480 GNY17_19590 PF04363 Protein of unknown function (DUF496) GNY17_19595 PF01554 MatE GNY17_19600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNY17_19605 PF00672 HAMP domain GNY17_19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_19605 PF00512 His Kinase A (phospho-acceptor) domain GNY17_19605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GNY17_19605 PF00072 Response regulator receiver domain GNY17_19605 PF01627 Hpt domain GNY17_19610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNY17_19610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNY17_19625 PF03466 LysR substrate binding domain GNY17_19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_19630 PF13404 AsnC-type helix-turn-helix domain GNY17_19630 PF01037 Lrp/AsnC ligand binding domain GNY17_19640 PF13520 Amino acid permease GNY17_19645 PF00155 Aminotransferase class I and II GNY17_19645 PF00392 Bacterial regulatory proteins, gntR family GNY17_19655 PF03109 ABC1 family GNY17_19660 PF00571 CBS domain GNY17_19660 PF01769 Divalent cation transporter GNY17_19660 PF03448 MgtE intracellular N domain GNY17_19665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GNY17_19670 PF07969 Amidohydrolase family GNY17_19680 PF01966 HD domain GNY17_19695 PF07690 Major Facilitator Superfamily GNY17_19705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GNY17_19710 PF00255 Glutathione peroxidase GNY17_19725 PF01323 DSBA-like thioredoxin domain GNY17_19745 PF00106 short chain dehydrogenase GNY17_19750 PF00072 Response regulator receiver domain GNY17_19750 PF00486 Transcriptional regulatory protein, C terminal GNY17_19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_19755 PF00672 HAMP domain GNY17_19755 PF00512 His Kinase A (phospho-acceptor) domain GNY17_19765 PF01219 Prokaryotic diacylglycerol kinase GNY17_19770 PF08019 Phosphoethanolamine transferase EptA/EptB GNY17_19770 PF00884 Sulfatase GNY17_19775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNY17_19800 PF01047 MarR family GNY17_19810 PF01734 Patatin-like phospholipase GNY17_19815 PF05726 Pirin C-terminal cupin domain GNY17_19815 PF02678 Pirin GNY17_19820 PF00313 'Cold-shock' DNA-binding domain GNY17_19840 PF00962 Adenosine/AMP deaminase GNY17_19845 PF00462 Glutaredoxin GNY17_19845 PF08534 Redoxin GNY17_19860 PF00768 D-alanyl-D-alanine carboxypeptidase GNY17_19860 PF07943 Penicillin-binding protein 5, C-terminal domain GNY17_19870 PF02798 Glutathione S-transferase, N-terminal domain GNY17_19875 PF00440 Bacterial regulatory proteins, tetR family GNY17_19875 PF02909 Tetracyclin repressor-like, C-terminal domain GNY17_19880 PF01872 RibD C-terminal domain GNY17_19930 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_19935 PF14785 Maltose transport system permease protein MalF P2 domain GNY17_19935 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_19940 PF01547 Bacterial extracellular solute-binding protein GNY17_19945 PF00005 ABC transporter GNY17_19945 PF08402 TOBE domain GNY17_19950 PF02397 Bacterial sugar transferase GNY17_19965 PF13614 AAA domain GNY17_19965 PF02706 Chain length determinant protein GNY17_19965 PF13807 G-rich domain on putative tyrosine kinase GNY17_19975 PF00534 Glycosyl transferases group 1 GNY17_20010 PF16925 Tetracyclin repressor-like, C-terminal domain GNY17_20010 PF00440 Bacterial regulatory proteins, tetR family GNY17_20015 PF16884 N-terminal domain of oxidoreductase GNY17_20015 PF00107 Zinc-binding dehydrogenase GNY17_20020 PF13417 Glutathione S-transferase, N-terminal domain GNY17_20025 PF06628 Catalase-related immune-responsive GNY17_20025 PF00199 Catalase GNY17_20030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNY17_20030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNY17_20040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_20050 PF12833 Helix-turn-helix domain GNY17_20055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_20055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_20060 PF01238 Phosphomannose isomerase type I GNY17_20070 PF13419 Haloacid dehalogenase-like hydrolase GNY17_20075 PF00127 Copper binding proteins, plastocyanin/azurin family GNY17_20080 PF03707 Bacterial signalling protein N terminal repeat GNY17_20080 PF00563 EAL domain GNY17_20080 PF00990 Diguanylate cyclase, GGDEF domain GNY17_20085 PF02386 Cation transport protein GNY17_20090 PF02254 TrkA-N domain GNY17_20090 PF02080 TrkA-C domain GNY17_20095 PF00072 Response regulator receiver domain GNY17_20095 PF00486 Transcriptional regulatory protein, C terminal GNY17_20100 PF16736 Single Cache-like GNY17_20100 PF00989 PAS fold GNY17_20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_20100 PF00512 His Kinase A (phospho-acceptor) domain GNY17_20105 PF00664 ABC transporter transmembrane region GNY17_20105 PF00005 ABC transporter GNY17_20110 PF00593 TonB dependent receptor GNY17_20110 PF07715 TonB-dependent Receptor Plug Domain GNY17_20115 PF00005 ABC transporter GNY17_20120 PF01497 Periplasmic binding protein GNY17_20125 PF01032 FecCD transport family GNY17_20135 PF01389 OmpA-like transmembrane domain GNY17_20135 PF00691 OmpA family GNY17_20150 PF00529 HlyD membrane-fusion protein of T1SS GNY17_20150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_20155 PF00005 ABC transporter GNY17_20155 PF00664 ABC transporter transmembrane region GNY17_20165 PF00196 Bacterial regulatory proteins, luxR family GNY17_20170 PF00196 Bacterial regulatory proteins, luxR family GNY17_20180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_20180 PF02743 Cache domain GNY17_20180 PF00672 HAMP domain GNY17_20190 PF07726 ATPase family associated with various cellular activities (AAA) GNY17_20190 PF17863 AAA lid domain GNY17_20195 PF01882 Protein of unknown function DUF58 GNY17_20205 PF13519 von Willebrand factor type A domain GNY17_20210 PF13519 von Willebrand factor type A domain GNY17_20210 PF07584 Aerotolerance regulator N-terminal GNY17_20230 PF00005 ABC transporter GNY17_20235 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_20240 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_20245 PF12849 PBP superfamily domain GNY17_20250 PF00672 HAMP domain GNY17_20250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_20270 PF07715 TonB-dependent Receptor Plug Domain GNY17_20270 PF00593 TonB dependent receptor GNY17_20275 PF00326 Prolyl oligopeptidase family GNY17_20275 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GNY17_20280 PF00271 Helicase conserved C-terminal domain GNY17_20280 PF00270 DEAD/DEAH box helicase GNY17_20290 PF17969 L,D-transpeptidase C-terminal domain GNY17_20290 PF03734 L,D-transpeptidase catalytic domain GNY17_20290 PF01476 LysM domain GNY17_20295 PF03441 FAD binding domain of DNA photolyase GNY17_20295 PF00875 DNA photolyase GNY17_20300 PF13411 MerR HTH family regulatory protein GNY17_20305 PF08349 Protein of unknown function (DUF1722) GNY17_20315 PF01048 Phosphorylase superfamily GNY17_20330 PF00990 Diguanylate cyclase, GGDEF domain GNY17_20335 PF11742 Protein of unknown function (DUF3302) GNY17_20340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_20340 PF00529 HlyD membrane-fusion protein of T1SS GNY17_20345 PF07155 ECF-type riboflavin transporter, S component GNY17_20350 PF12558 ATP-binding cassette cobalt transporter GNY17_20350 PF00005 ABC transporter GNY17_20365 PF13237 4Fe-4S dicluster domain GNY17_20365 PF12801 4Fe-4S binding domain GNY17_20370 PF12838 4Fe-4S dicluster domain GNY17_20370 PF12800 4Fe-4S binding domain GNY17_20375 PF00583 Acetyltransferase (GNAT) family GNY17_20395 PF07238 PilZ domain GNY17_20395 PF12945 Flagellar protein YcgR GNY17_20400 PF00672 HAMP domain GNY17_20400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_20405 PF05362 Lon protease (S16) C-terminal proteolytic domain GNY17_20405 PF13654 AAA domain GNY17_20415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_20415 PF00005 ABC transporter GNY17_20420 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GNY17_20420 PF00326 Prolyl oligopeptidase family GNY17_20425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_20425 PF03466 LysR substrate binding domain GNY17_20430 PF02652 L-lactate permease GNY17_20435 PF01070 FMN-dependent dehydrogenase GNY17_20445 PF00924 Mechanosensitive ion channel GNY17_20450 PF00194 Eukaryotic-type carbonic anhydrase GNY17_20485 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_20485 PF00107 Zinc-binding dehydrogenase GNY17_20490 PF00155 Aminotransferase class I and II GNY17_20495 PF03707 Bacterial signalling protein N terminal repeat GNY17_20495 PF00990 Diguanylate cyclase, GGDEF domain GNY17_20495 PF00563 EAL domain GNY17_20500 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_20505 PF00266 Aminotransferase class-V GNY17_20510 PF00080 Copper/zinc superoxide dismutase (SODC) GNY17_20515 PF00512 His Kinase A (phospho-acceptor) domain GNY17_20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_20515 PF00072 Response regulator receiver domain GNY17_20515 PF13426 PAS domain GNY17_20515 PF08448 PAS fold GNY17_20520 PF00486 Transcriptional regulatory protein, C terminal GNY17_20520 PF00072 Response regulator receiver domain GNY17_20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_20550 PF03466 LysR substrate binding domain GNY17_20555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_20590 PF03466 LysR substrate binding domain GNY17_20605 PF18269 T3SS EscN ATPase C-terminal domain GNY17_20605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNY17_20615 PF14841 FliG middle domain GNY17_20615 PF01706 FliG C-terminal domain GNY17_20615 PF14842 FliG N-terminal domain GNY17_20620 PF08345 Flagellar M-ring protein C-terminal GNY17_20620 PF01514 Secretory protein of YscJ/FliF family GNY17_20625 PF02049 Flagellar hook-basal body complex protein FliE GNY17_20630 PF00072 Response regulator receiver domain GNY17_20630 PF00158 Sigma-54 interaction domain GNY17_20630 PF02954 Bacterial regulatory protein, Fis family GNY17_20645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNY17_20650 PF00813 FliP family GNY17_20655 PF01313 Bacterial export proteins, family 3 GNY17_20660 PF01311 Bacterial export proteins, family 1 GNY17_20665 PF01312 FlhB HrpN YscU SpaS Family GNY17_20670 PF00771 FHIPEP family GNY17_20680 PF00669 Bacterial flagellin N-terminal helical region GNY17_20680 PF00700 Bacterial flagellin C-terminal helical region GNY17_20690 PF07196 Flagellin hook IN motif GNY17_20690 PF07195 Flagellar hook-associated protein 2 C-terminus GNY17_20690 PF02465 Flagellar hook-associated protein 2 N-terminus GNY17_20695 PF02561 Flagellar protein FliS GNY17_20710 PF03748 Flagellar basal body-associated protein FliL GNY17_20715 PF04545 Sigma-70, region 4 GNY17_20715 PF04542 Sigma-70 region 2 GNY17_20720 PF01618 MotA/TolQ/ExbB proton channel family GNY17_20725 PF00691 OmpA family GNY17_20725 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNY17_20735 PF08000 Bacterial PH domain GNY17_20760 PF04055 Radical SAM superfamily GNY17_20765 PF00923 Transaldolase/Fructose-6-phosphate aldolase GNY17_20775 PF00583 Acetyltransferase (GNAT) family GNY17_20785 PF07690 Major Facilitator Superfamily GNY17_20790 PF03466 LysR substrate binding domain GNY17_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_20880 PF00892 EamA-like transporter family GNY17_20905 PF13533 Biotin-lipoyl like GNY17_20915 PF01594 AI-2E family transporter GNY17_20920 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GNY17_20930 PF00175 Oxidoreductase NAD-binding domain GNY17_20930 PF00970 Oxidoreductase FAD-binding domain GNY17_20940 PF09905 DNA-binding protein VF530 GNY17_20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_20945 PF03466 LysR substrate binding domain GNY17_20955 PF00881 Nitroreductase family GNY17_20960 PF12833 Helix-turn-helix domain GNY17_20960 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GNY17_20965 PF00128 Alpha amylase, catalytic domain GNY17_20965 PF00686 Starch binding domain GNY17_20970 PF00768 D-alanyl-D-alanine carboxypeptidase GNY17_20970 PF07943 Penicillin-binding protein 5, C-terminal domain GNY17_20975 PF00561 alpha/beta hydrolase fold GNY17_20990 PF18416 N-acetylglucosamine binding protein domain 2 GNY17_20990 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNY17_20995 PF01734 Patatin-like phospholipase GNY17_21000 PF01914 MarC family integral membrane protein GNY17_21005 PF00881 Nitroreductase family GNY17_21010 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GNY17_21010 PF10531 SLBB domain GNY17_21010 PF02563 Polysaccharide biosynthesis/export protein GNY17_21015 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNY17_21020 PF13614 AAA domain GNY17_21020 PF02706 Chain length determinant protein GNY17_21020 PF13807 G-rich domain on putative tyrosine kinase GNY17_21030 PF08803 Putative mono-oxygenase ydhR GNY17_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_21035 PF03466 LysR substrate binding domain GNY17_21045 PF00375 Sodium:dicarboxylate symporter family GNY17_21050 PF06803 Protein of unknown function (DUF1232) GNY17_21055 PF07687 Peptidase dimerisation domain GNY17_21055 PF01546 Peptidase family M20/M25/M40 GNY17_21060 PF07670 Nucleoside recognition GNY17_21065 PF07670 Nucleoside recognition GNY17_21080 PF00128 Alpha amylase, catalytic domain GNY17_21085 PF00912 Transglycosylase GNY17_21090 PF00128 Alpha amylase, catalytic domain GNY17_21090 PF02806 Alpha amylase, C-terminal all-beta domain GNY17_21090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNY17_21095 PF02446 4-alpha-glucanotransferase GNY17_21100 PF00343 Carbohydrate phosphorylase GNY17_21115 PF17874 MalT-like TPR region GNY17_21115 PF00196 Bacterial regulatory proteins, luxR family GNY17_21130 PF02630 SCO1/SenC GNY17_21140 PF02378 Phosphotransferase system, EIIC GNY17_21140 PF00367 phosphotransferase system, EIIB GNY17_21145 PF03193 RsgA GTPase GNY17_21150 PF00375 Sodium:dicarboxylate symporter family GNY17_21160 PF08543 Phosphomethylpyrimidine kinase GNY17_21170 PF13520 Amino acid permease GNY17_21175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GNY17_21175 PF01276 Orn/Lys/Arg decarboxylase, major domain GNY17_21175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNY17_21190 PF17967 Pullulanase N2 domain GNY17_21190 PF18494 Pullulanase Ins domain GNY17_21190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNY17_21190 PF11852 Domain of unknown function (DUF3372) GNY17_21190 PF03714 Bacterial pullanase-associated domain GNY17_21195 PF04231 Endonuclease I GNY17_21205 PF16657 Maltogenic Amylase, C-terminal domain GNY17_21205 PF00128 Alpha amylase, catalytic domain GNY17_21205 PF02903 Alpha amylase, N-terminal ig-like domain GNY17_21220 PF02264 LamB porin GNY17_21225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNY17_21225 PF00128 Alpha amylase, catalytic domain GNY17_21235 PF07690 Major Facilitator Superfamily GNY17_21245 PF01551 Peptidase family M23 GNY17_21245 PF04225 Opacity-associated protein A LysM-like domain GNY17_21255 PF00675 Insulinase (Peptidase family M16) GNY17_21255 PF05193 Peptidase M16 inactive domain GNY17_21260 PF17200 Single Cache domain 2 GNY17_21260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_21260 PF00672 HAMP domain GNY17_21265 PF00005 ABC transporter GNY17_21270 PF01032 FecCD transport family GNY17_21275 PF01032 FecCD transport family GNY17_21280 PF01497 Periplasmic binding protein GNY17_21285 PF07660 Secretin and TonB N terminus short domain GNY17_21285 PF00593 TonB dependent receptor GNY17_21285 PF07715 TonB-dependent Receptor Plug Domain GNY17_21290 PF07715 TonB-dependent Receptor Plug Domain GNY17_21290 PF00593 TonB dependent receptor GNY17_21295 PF00206 Lyase GNY17_21295 PF02655 ATP-grasp domain GNY17_21300 PF06276 Ferric iron reductase FhuF-like transporter GNY17_21300 PF04183 IucA / IucC family GNY17_21305 PF07690 Major Facilitator Superfamily GNY17_21310 PF06276 Ferric iron reductase FhuF-like transporter GNY17_21310 PF04183 IucA / IucC family GNY17_21315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNY17_21315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNY17_21320 PF01547 Bacterial extracellular solute-binding protein GNY17_21325 PF00512 His Kinase A (phospho-acceptor) domain GNY17_21325 PF08521 Two-component sensor kinase N-terminal GNY17_21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_21330 PF00486 Transcriptional regulatory protein, C terminal GNY17_21330 PF00072 Response regulator receiver domain GNY17_21340 PF00367 phosphotransferase system, EIIB GNY17_21340 PF02378 Phosphotransferase system, EIIC GNY17_21355 PF02653 Branched-chain amino acid transport system / permease component GNY17_21360 PF00005 ABC transporter GNY17_21365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNY17_21370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNY17_21370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNY17_21375 PF00596 Class II Aldolase and Adducin N-terminal domain GNY17_21380 PF02610 L-arabinose isomerase GNY17_21380 PF11762 L-arabinose isomerase C-terminal domain GNY17_21390 PF02311 AraC-like ligand binding domain GNY17_21390 PF12833 Helix-turn-helix domain GNY17_21405 PF02566 OsmC-like protein GNY17_21410 PF01047 MarR family GNY17_21415 PF10417 C-terminal domain of 1-Cys peroxiredoxin GNY17_21415 PF00578 AhpC/TSA family GNY17_21420 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNY17_21420 PF13192 Thioredoxin domain GNY17_21435 PF03466 LysR substrate binding domain GNY17_21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_21445 PF01965 DJ-1/PfpI family GNY17_21445 PF12833 Helix-turn-helix domain GNY17_21450 PF04542 Sigma-70 region 2 GNY17_21450 PF08281 Sigma-70, region 4 GNY17_21465 PF00672 HAMP domain GNY17_21465 PF12729 Four helix bundle sensory module for signal transduction GNY17_21465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_21470 PF03466 LysR substrate binding domain GNY17_21475 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNY17_21475 PF02056 Family 4 glycosyl hydrolase GNY17_21490 PF03473 MOSC domain GNY17_21490 PF03475 3-alpha domain GNY17_21495 PF00270 DEAD/DEAH box helicase GNY17_21495 PF00271 Helicase conserved C-terminal domain GNY17_21500 PF03786 D-mannonate dehydratase (UxuA) GNY17_21505 PF00392 Bacterial regulatory proteins, gntR family GNY17_21505 PF07729 FCD domain GNY17_21510 PF03480 Bacterial extracellular solute-binding protein, family 7 GNY17_21515 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNY17_21520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNY17_21525 PF01232 Mannitol dehydrogenase Rossmann domain GNY17_21525 PF08125 Mannitol dehydrogenase C-terminal domain GNY17_21530 PF02614 Glucuronate isomerase GNY17_21535 PF00294 pfkB family carbohydrate kinase GNY17_21540 PF01081 KDPG and KHG aldolase GNY17_21545 PF10688 Bacterial inner membrane protein GNY17_21565 PF12833 Helix-turn-helix domain GNY17_21565 PF06719 AraC-type transcriptional regulator N-terminus GNY17_21575 PF00664 ABC transporter transmembrane region GNY17_21575 PF00005 ABC transporter GNY17_21585 PF01037 Lrp/AsnC ligand binding domain GNY17_21620 PF00474 Sodium:solute symporter family GNY17_21630 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GNY17_21630 PF00171 Aldehyde dehydrogenase family GNY17_21630 PF01619 Proline dehydrogenase GNY17_21630 PF14850 DNA-binding domain of Proline dehydrogenase GNY17_21635 PF12833 Helix-turn-helix domain GNY17_21650 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GNY17_21650 PF01243 Pyridoxamine 5'-phosphate oxidase GNY17_21655 PF02743 Cache domain GNY17_21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_21655 PF00512 His Kinase A (phospho-acceptor) domain GNY17_21660 PF02954 Bacterial regulatory protein, Fis family GNY17_21660 PF00158 Sigma-54 interaction domain GNY17_21660 PF00072 Response regulator receiver domain GNY17_21665 PF00529 HlyD membrane-fusion protein of T1SS GNY17_21680 PF00005 ABC transporter GNY17_21680 PF03412 Peptidase C39 family GNY17_21680 PF00664 ABC transporter transmembrane region GNY17_21690 PF03358 NADPH-dependent FMN reductase GNY17_21695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_21700 PF00246 Zinc carboxypeptidase GNY17_21705 PF01380 SIS domain GNY17_21705 PF01418 Helix-turn-helix domain, rpiR family GNY17_21715 PF01380 SIS domain GNY17_21720 PF00367 phosphotransferase system, EIIB GNY17_21720 PF02378 Phosphotransferase system, EIIC GNY17_21725 PF00267 Gram-negative porin GNY17_21730 PF03575 Peptidase family S51 GNY17_21735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_21735 PF03466 LysR substrate binding domain GNY17_21740 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_21750 PF05127 Helicase GNY17_21750 PF13718 GNAT acetyltransferase 2 GNY17_21755 PF02195 ParB-like nuclease domain GNY17_21755 PF08775 ParB family GNY17_21760 PF13614 AAA domain GNY17_21760 PF18607 ParA helix turn helix domain GNY17_21775 PF00005 ABC transporter GNY17_21775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_21780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNY17_21780 PF00005 ABC transporter GNY17_21790 PF00925 GTP cyclohydrolase II GNY17_21790 PF08719 Domain of unknown function (DUF1768) GNY17_21805 PF00512 His Kinase A (phospho-acceptor) domain GNY17_21805 PF17149 Periplasmic sensor domain found in signal transduction proteins GNY17_21805 PF01627 Hpt domain GNY17_21805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_21805 PF00072 Response regulator receiver domain GNY17_21805 PF00672 HAMP domain GNY17_21815 PF01709 Transcriptional regulator GNY17_21820 PF01098 Cell cycle protein GNY17_21835 PF00005 ABC transporter GNY17_21855 PF06580 Histidine kinase GNY17_21855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_21855 PF13492 GAF domain GNY17_21855 PF07694 5TMR of 5TMR-LYT GNY17_21860 PF04397 LytTr DNA-binding domain GNY17_21860 PF00072 Response regulator receiver domain GNY17_21870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNY17_21875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_21875 PF17200 Single Cache domain 2 GNY17_21875 PF00672 HAMP domain GNY17_21890 PF00132 Bacterial transferase hexapeptide (six repeats) GNY17_21905 PF03616 Sodium/glutamate symporter GNY17_21915 PF00005 ABC transporter GNY17_21920 PF00392 Bacterial regulatory proteins, gntR family GNY17_21920 PF00155 Aminotransferase class I and II GNY17_21925 PF03616 Sodium/glutamate symporter GNY17_21940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GNY17_21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_21955 PF03466 LysR substrate binding domain GNY17_21960 PF17954 Quercetinase C-terminal cupin domain GNY17_21960 PF02678 Pirin GNY17_21965 PF07681 DoxX GNY17_21980 PF00730 HhH-GPD superfamily base excision DNA repair protein GNY17_21980 PF06029 AlkA N-terminal domain GNY17_21985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNY17_21985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNY17_21995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNY17_22005 PF03600 Citrate transporter GNY17_22025 PF08329 Chitinase A, N-terminal domain GNY17_22025 PF00704 Glycosyl hydrolases family 18 GNY17_22035 PF06865 Pyrimidine/purine nucleoside phosphorylase GNY17_22045 PF00990 Diguanylate cyclase, GGDEF domain GNY17_22045 PF00563 EAL domain GNY17_22055 PF01554 MatE GNY17_22060 PF00849 RNA pseudouridylate synthase GNY17_22075 PF03466 LysR substrate binding domain GNY17_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22090 PF17152 Periplasmic sensor domain GNY17_22090 PF00990 Diguanylate cyclase, GGDEF domain GNY17_22100 PF00756 Putative esterase GNY17_22105 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_22105 PF00107 Zinc-binding dehydrogenase GNY17_22110 PF00797 N-acetyltransferase GNY17_22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22115 PF03466 LysR substrate binding domain GNY17_22130 PF01614 Bacterial transcriptional regulator GNY17_22130 PF09339 IclR helix-turn-helix domain GNY17_22140 PF10688 Bacterial inner membrane protein GNY17_22145 PF07883 Cupin domain GNY17_22160 PF00294 pfkB family carbohydrate kinase GNY17_22165 PF01081 KDPG and KHG aldolase GNY17_22180 PF13229 Right handed beta helix region GNY17_22185 PF00474 Sodium:solute symporter family GNY17_22190 PF14583 Oligogalacturonate lyase GNY17_22195 PF08021 Siderophore-interacting FAD-binding domain GNY17_22195 PF04954 Siderophore-interacting protein GNY17_22200 PF01810 LysE type translocator GNY17_22205 PF01037 Lrp/AsnC ligand binding domain GNY17_22210 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNY17_22210 PF18416 N-acetylglucosamine binding protein domain 2 GNY17_22225 PF13599 Pentapeptide repeats (9 copies) GNY17_22230 PF03922 OmpW family GNY17_22235 PF13533 Biotin-lipoyl like GNY17_22240 PF07690 Major Facilitator Superfamily GNY17_22250 PF12706 Beta-lactamase superfamily domain GNY17_22260 PF01204 Trehalase GNY17_22265 PF01661 Macro domain GNY17_22270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_22275 PF03466 LysR substrate binding domain GNY17_22275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22285 PF03466 LysR substrate binding domain GNY17_22300 PF13419 Haloacid dehalogenase-like hydrolase GNY17_22325 PF13556 PucR C-terminal helix-turn-helix domain GNY17_22325 PF17853 GGDEF-like domain GNY17_22325 PF05651 Putative sugar diacid recognition GNY17_22330 PF02447 GntP family permease GNY17_22335 PF02595 Glycerate kinase family GNY17_22340 PF00155 Aminotransferase class I and II GNY17_22340 PF00392 Bacterial regulatory proteins, gntR family GNY17_22360 PF00583 Acetyltransferase (GNAT) family GNY17_22365 PF13344 Haloacid dehalogenase-like hydrolase GNY17_22385 PF03264 NapC/NirT cytochrome c family, N-terminal region GNY17_22390 PF01568 Molydopterin dinucleotide binding domain GNY17_22390 PF18364 Molybdopterin oxidoreductase N-terminal domain GNY17_22390 PF00384 Molybdopterin oxidoreductase GNY17_22400 PF02581 Thiamine monophosphate synthase GNY17_22405 PF02110 Hydroxyethylthiazole kinase family GNY17_22410 PF03070 TENA/THI-4/PQQC family GNY17_22415 PF09084 NMT1/THI5 like GNY17_22420 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_22425 PF00005 ABC transporter GNY17_22430 PF08543 Phosphomethylpyrimidine kinase GNY17_22440 PF01523 Putative modulator of DNA gyrase GNY17_22445 PF01523 Putative modulator of DNA gyrase GNY17_22450 PF04013 Putative SAM-dependent RNA methyltransferase GNY17_22505 PF10928 Protein of unknown function (DUF2810) GNY17_22510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNY17_22510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNY17_22520 PF03009 Glycerophosphoryl diester phosphodiesterase family GNY17_22530 PF00072 Response regulator receiver domain GNY17_22530 PF00486 Transcriptional regulatory protein, C terminal GNY17_22535 PF00672 HAMP domain GNY17_22535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_22535 PF00512 His Kinase A (phospho-acceptor) domain GNY17_22535 PF16750 Sensor domain of 2-component histidine kinase GNY17_22540 PF07715 TonB-dependent Receptor Plug Domain GNY17_22540 PF00593 TonB dependent receptor GNY17_22550 PF01618 MotA/TolQ/ExbB proton channel family GNY17_22555 PF01618 MotA/TolQ/ExbB proton channel family GNY17_22560 PF02472 Biopolymer transport protein ExbD/TolR GNY17_22600 PF01297 Zinc-uptake complex component A periplasmic GNY17_22605 PF00005 ABC transporter GNY17_22610 PF00950 ABC 3 transport family GNY17_22625 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GNY17_22625 PF00326 Prolyl oligopeptidase family GNY17_22630 PF07690 Major Facilitator Superfamily GNY17_22635 PF00491 Arginase family GNY17_22640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNY17_22640 PF17810 Arginine decarboxylase helical bundle domain GNY17_22640 PF17944 Arginine decarboxylase C-terminal helical extension GNY17_22645 PF00753 Metallo-beta-lactamase superfamily GNY17_22650 PF08443 RimK-like ATP-grasp domain GNY17_22650 PF18030 RimK PreATP-grasp domain GNY17_22655 PF08443 RimK-like ATP-grasp domain GNY17_22655 PF18030 RimK PreATP-grasp domain GNY17_22665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22665 PF03466 LysR substrate binding domain GNY17_22690 PF00232 Glycosyl hydrolase family 1 GNY17_22700 PF02743 Cache domain GNY17_22700 PF00512 His Kinase A (phospho-acceptor) domain GNY17_22700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_22705 PF02954 Bacterial regulatory protein, Fis family GNY17_22705 PF00072 Response regulator receiver domain GNY17_22705 PF00158 Sigma-54 interaction domain GNY17_22710 PF05230 MASE2 domain GNY17_22710 PF00990 Diguanylate cyclase, GGDEF domain GNY17_22715 PF05525 Branched-chain amino acid transport protein GNY17_22740 PF01266 FAD dependent oxidoreductase GNY17_22750 PF01212 Beta-eliminating lyase GNY17_22770 PF07662 Na+ dependent nucleoside transporter C-terminus GNY17_22770 PF07670 Nucleoside recognition GNY17_22770 PF01773 Na+ dependent nucleoside transporter N-terminus GNY17_22780 PF13532 2OG-Fe(II) oxygenase superfamily GNY17_22785 PF05230 MASE2 domain GNY17_22785 PF00990 Diguanylate cyclase, GGDEF domain GNY17_22790 PF12729 Four helix bundle sensory module for signal transduction GNY17_22790 PF00672 HAMP domain GNY17_22790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_22805 PF00990 Diguanylate cyclase, GGDEF domain GNY17_22810 PF03441 FAD binding domain of DNA photolyase GNY17_22810 PF00875 DNA photolyase GNY17_22815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GNY17_22830 PF01641 SelR domain GNY17_22830 PF01625 Peptide methionine sulfoxide reductase GNY17_22835 PF02566 OsmC-like protein GNY17_22840 PF14602 Hexapeptide repeat of succinyl-transferase GNY17_22840 PF12464 Maltose acetyltransferase GNY17_22875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_22875 PF03466 LysR substrate binding domain GNY17_22880 PF13419 Haloacid dehalogenase-like hydrolase GNY17_22895 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GNY17_22900 PF00194 Eukaryotic-type carbonic anhydrase GNY17_22905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GNY17_22910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNY17_22915 PF02687 FtsX-like permease family GNY17_22915 PF12704 MacB-like periplasmic core domain GNY17_22915 PF00005 ABC transporter GNY17_22920 PF02321 Outer membrane efflux protein GNY17_22925 PF00657 GDSL-like Lipase/Acylhydrolase GNY17_22940 PF03611 PTS system sugar-specific permease component GNY17_22950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_22955 PF00356 Bacterial regulatory proteins, lacI family GNY17_22960 PF13419 Haloacid dehalogenase-like hydrolase GNY17_22970 PF00266 Aminotransferase class-V GNY17_23005 PF09077 Mu B transposition protein, C terminal GNY17_23005 PF13401 AAA domain GNY17_23030 PF04245 37-kD nucleoid-associated bacterial protein GNY17_23220 PF01555 DNA methylase GNY17_23250 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_23255 PF07702 UTRA domain GNY17_23255 PF00392 Bacterial regulatory proteins, gntR family GNY17_23270 PF04393 Protein of unknown function (DUF535) GNY17_23280 PF01266 FAD dependent oxidoreductase GNY17_23285 PF00246 Zinc carboxypeptidase GNY17_23285 PF18027 Cytosolic carboxypeptidase N-terminal domain GNY17_23295 PF00691 OmpA family GNY17_23295 PF01389 OmpA-like transmembrane domain GNY17_23300 PF03466 LysR substrate binding domain GNY17_23300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23310 PF03466 LysR substrate binding domain GNY17_23310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23325 PF03315 Serine dehydratase beta chain GNY17_23325 PF03313 Serine dehydratase alpha chain GNY17_23345 PF00133 tRNA synthetases class I (I, L, M and V) GNY17_23345 PF08264 Anticodon-binding domain of tRNA GNY17_23355 PF01464 Transglycosylase SLT domain GNY17_23375 PF00460 Flagella basal body rod protein GNY17_23380 PF00460 Flagella basal body rod protein GNY17_23380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_23385 PF13861 FlgD Tudor-like domain GNY17_23385 PF13860 FlgD Ig-like domain GNY17_23385 PF03963 Flagellar hook capping protein - N-terminal region GNY17_23390 PF00460 Flagella basal body rod protein GNY17_23390 PF07559 Flagellar basal body protein FlaE GNY17_23390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_23395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_23395 PF00460 Flagella basal body rod protein GNY17_23400 PF00460 Flagella basal body rod protein GNY17_23400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_23405 PF02107 Flagellar L-ring protein GNY17_23410 PF02119 Flagellar P-ring protein GNY17_23415 PF10135 Rod binding protein GNY17_23415 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GNY17_23420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNY17_23420 PF00460 Flagella basal body rod protein GNY17_23425 PF00669 Bacterial flagellin N-terminal helical region GNY17_23445 PF01070 FMN-dependent dehydrogenase GNY17_23475 PF00581 Rhodanese-like domain GNY17_23485 PF00166 Chaperonin 10 Kd subunit GNY17_23490 PF00118 TCP-1/cpn60 chaperonin family GNY17_23505 PF01810 LysE type translocator GNY17_23510 PF03466 LysR substrate binding domain GNY17_23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23525 PF08359 YsiA-like protein, C-terminal region GNY17_23525 PF00440 Bacterial regulatory proteins, tetR family GNY17_23535 PF02872 5'-nucleotidase, C-terminal domain GNY17_23535 PF00149 Calcineurin-like phosphoesterase GNY17_23540 PF03060 Nitronate monooxygenase GNY17_23545 PF07971 Glycosyl hydrolase family 92 GNY17_23545 PF17678 Glycosyl hydrolase family 92 N-terminal domain GNY17_23555 PF17678 Glycosyl hydrolase family 92 N-terminal domain GNY17_23555 PF07971 Glycosyl hydrolase family 92 GNY17_23560 PF17678 Glycosyl hydrolase family 92 N-terminal domain GNY17_23560 PF07971 Glycosyl hydrolase family 92 GNY17_23580 PF01625 Peptide methionine sulfoxide reductase GNY17_23580 PF01641 SelR domain GNY17_23590 PF08220 DeoR-like helix-turn-helix domain GNY17_23590 PF00455 DeoR C terminal sensor domain GNY17_23600 PF06628 Catalase-related immune-responsive GNY17_23600 PF00199 Catalase GNY17_23610 PF00857 Isochorismatase family GNY17_23620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GNY17_23620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GNY17_23650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23650 PF03466 LysR substrate binding domain GNY17_23655 PF01389 OmpA-like transmembrane domain GNY17_23655 PF00691 OmpA family GNY17_23665 PF06629 MltA-interacting protein MipA GNY17_23675 PF17185 NlpE C-terminal OB domain GNY17_23675 PF04170 NlpE N-terminal domain GNY17_23685 PF02001 Protein of unknown function DUF134 GNY17_23710 PF14492 Elongation Factor G, domain II GNY17_23710 PF00679 Elongation factor G C-terminus GNY17_23710 PF00009 Elongation factor Tu GTP binding domain GNY17_23710 PF03144 Elongation factor Tu domain 2 GNY17_23710 PF03764 Elongation factor G, domain IV GNY17_23720 PF13378 Enolase C-terminal domain-like GNY17_23720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNY17_23730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23730 PF03466 LysR substrate binding domain GNY17_23750 PF00376 MerR family regulatory protein GNY17_23750 PF09278 MerR, DNA binding GNY17_23780 PF13091 PLD-like domain GNY17_23790 PF13533 Biotin-lipoyl like GNY17_23795 PF00873 AcrB/AcrD/AcrF family GNY17_23825 PF08402 TOBE domain GNY17_23825 PF00005 ABC transporter GNY17_23850 PF00392 Bacterial regulatory proteins, gntR family GNY17_23850 PF07702 UTRA domain GNY17_23855 PF02028 BCCT, betaine/carnitine/choline family transporter GNY17_23860 PF02837 Glycosyl hydrolases family 2, sugar binding domain GNY17_23860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GNY17_23860 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 GNY17_23860 PF00703 Glycosyl hydrolases family 2 GNY17_23865 PF00196 Bacterial regulatory proteins, luxR family GNY17_23875 PF07694 5TMR of 5TMR-LYT GNY17_23875 PF00990 Diguanylate cyclase, GGDEF domain GNY17_23890 PF00873 AcrB/AcrD/AcrF family GNY17_23895 PF13533 Biotin-lipoyl like GNY17_23900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23900 PF03466 LysR substrate binding domain GNY17_23910 PF13416 Bacterial extracellular solute-binding protein GNY17_23915 PF00579 tRNA synthetases class I (W and Y) GNY17_23935 PF02896 PEP-utilising enzyme, TIM barrel domain GNY17_23935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNY17_23935 PF00391 PEP-utilising enzyme, mobile domain GNY17_23940 PF03618 Kinase/pyrophosphorylase GNY17_23945 PF17763 Glutaminase/Asparaginase C-terminal domain GNY17_23945 PF00710 Asparaginase, N-terminal GNY17_23955 PF03466 LysR substrate binding domain GNY17_23955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_23970 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GNY17_23980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GNY17_23980 PF12833 Helix-turn-helix domain GNY17_23995 PF00107 Zinc-binding dehydrogenase GNY17_23995 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_24000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNY17_24010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_24010 PF03466 LysR substrate binding domain GNY17_24015 PF03466 LysR substrate binding domain GNY17_24015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_24025 PF00271 Helicase conserved C-terminal domain GNY17_24025 PF00270 DEAD/DEAH box helicase GNY17_24070 PF00155 Aminotransferase class I and II GNY17_24075 PF01497 Periplasmic binding protein GNY17_24075 PF12833 Helix-turn-helix domain GNY17_24105 PF05661 Protein of unknown function (DUF808) GNY17_24110 PF01979 Amidohydrolase family GNY17_24120 PF01679 Proteolipid membrane potential modulator GNY17_24130 PF03473 MOSC domain GNY17_24130 PF03476 MOSC N-terminal beta barrel domain GNY17_24130 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_24130 PF03473 MOSC domain GNY17_24130 PF03476 MOSC N-terminal beta barrel domain GNY17_24130 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_24135 PF02540 NAD synthase GNY17_24140 PF01467 Cytidylyltransferase-like GNY17_24180 PF00005 ABC transporter GNY17_24185 PF01032 FecCD transport family GNY17_24195 PF02472 Biopolymer transport protein ExbD/TolR GNY17_24200 PF01618 MotA/TolQ/ExbB proton channel family GNY17_24205 PF03544 Gram-negative bacterial TonB protein C-terminal GNY17_24210 PF04055 Radical SAM superfamily GNY17_24215 PF06228 Haem utilisation ChuX/HutX GNY17_24220 PF01243 Pyridoxamine 5'-phosphate oxidase GNY17_24230 PF00072 Response regulator receiver domain GNY17_24230 PF01584 CheW-like domain GNY17_24250 PF13087 AAA domain GNY17_24250 PF13091 PLD-like domain GNY17_24255 PF00082 Subtilase family GNY17_24275 PF00141 Peroxidase GNY17_24280 PF00210 Ferritin-like domain GNY17_24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_24290 PF03466 LysR substrate binding domain GNY17_24305 PF04151 Bacterial pre-peptidase C-terminal domain GNY17_24305 PF08453 Peptidase family M9 N-terminal GNY17_24305 PF01752 Collagenase GNY17_24315 PF00128 Alpha amylase, catalytic domain GNY17_24330 PF02254 TrkA-N domain GNY17_24330 PF00999 Sodium/hydrogen exchanger family GNY17_24335 PF02525 Flavodoxin-like fold GNY17_24340 PF00582 Universal stress protein family GNY17_24345 PF00005 ABC transporter GNY17_24345 PF12848 ABC transporter GNY17_24345 PF16326 ABC transporter C-terminal domain GNY17_24350 PF00326 Prolyl oligopeptidase family GNY17_24350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GNY17_24360 PF13533 Biotin-lipoyl like GNY17_24365 PF00873 AcrB/AcrD/AcrF family GNY17_24370 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GNY17_24380 PF13302 Acetyltransferase (GNAT) domain GNY17_24390 PF13185 GAF domain GNY17_24390 PF00990 Diguanylate cyclase, GGDEF domain GNY17_24400 PF00111 2Fe-2S iron-sulfur cluster binding domain GNY17_24400 PF00970 Oxidoreductase FAD-binding domain GNY17_24400 PF00175 Oxidoreductase NAD-binding domain GNY17_24410 PF00873 AcrB/AcrD/AcrF family GNY17_24435 PF12838 4Fe-4S dicluster domain GNY17_24435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNY17_24435 PF00384 Molybdopterin oxidoreductase GNY17_24435 PF01568 Molydopterin dinucleotide binding domain GNY17_24435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNY17_24455 PF00005 ABC transporter GNY17_24465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_24465 PF00672 HAMP domain GNY17_24465 PF17200 Single Cache domain 2 GNY17_24470 PF10282 Lactonase, 7-bladed beta-propeller GNY17_24475 PF02567 Phenazine biosynthesis-like protein GNY17_24480 PF01161 Phosphatidylethanolamine-binding protein GNY17_24490 PF01758 Sodium Bile acid symporter family GNY17_24510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_24515 PF02378 Phosphotransferase system, EIIC GNY17_24515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_24520 PF08240 Alcohol dehydrogenase GroES-like domain GNY17_24520 PF00107 Zinc-binding dehydrogenase GNY17_24555 PF03222 Tryptophan/tyrosine permease family GNY17_24565 PF02743 Cache domain GNY17_24565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_24565 PF00672 HAMP domain GNY17_24595 PF01476 LysM domain GNY17_24595 PF01551 Peptidase family M23 GNY17_24595 PF08525 Opacity-associated protein A N-terminal motif GNY17_24600 PF00563 EAL domain GNY17_24600 PF00990 Diguanylate cyclase, GGDEF domain GNY17_24600 PF08448 PAS fold GNY17_24600 PF08447 PAS fold GNY17_24605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_24605 PF03466 LysR substrate binding domain GNY17_24610 PF07690 Major Facilitator Superfamily GNY17_24630 PF00462 Glutaredoxin GNY17_24635 PF00892 EamA-like transporter family GNY17_24640 PF00267 Gram-negative porin GNY17_24650 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNY17_24665 PF12833 Helix-turn-helix domain GNY17_24670 PF01810 LysE type translocator GNY17_24680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNY17_24680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNY17_24680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNY17_24680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNY17_24685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNY17_24685 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNY17_24690 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNY17_24695 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GNY17_24700 PF00510 Cytochrome c oxidase subunit III GNY17_24720 PF02628 Cytochrome oxidase assembly protein GNY17_24725 PF01040 UbiA prenyltransferase family GNY17_24730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GNY17_24730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNY17_24765 PF00313 'Cold-shock' DNA-binding domain GNY17_24770 PF03889 Alternative ribosome-rescue factor A GNY17_24775 PF13426 PAS domain GNY17_24775 PF08447 PAS fold GNY17_24775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_24785 PF00990 Diguanylate cyclase, GGDEF domain GNY17_24800 PF02687 FtsX-like permease family GNY17_24800 PF00005 ABC transporter GNY17_24800 PF12704 MacB-like periplasmic core domain GNY17_24805 PF12704 MacB-like periplasmic core domain GNY17_24805 PF00005 ABC transporter GNY17_24805 PF02687 FtsX-like permease family GNY17_24815 PF17200 Single Cache domain 2 GNY17_24815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_24815 PF00672 HAMP domain GNY17_24820 PF00210 Ferritin-like domain GNY17_24830 PF07995 Glucose / Sorbosone dehydrogenase GNY17_24835 PF00465 Iron-containing alcohol dehydrogenase GNY17_24850 PF00892 EamA-like transporter family GNY17_24875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_24875 PF03466 LysR substrate binding domain GNY17_24885 PF00501 AMP-binding enzyme GNY17_24885 PF13193 AMP-binding enzyme C-terminal domain GNY17_24890 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GNY17_24895 PF01329 Pterin 4 alpha carbinolamine dehydratase GNY17_24920 PF12843 Putative quorum-sensing-regulated virulence factor GNY17_24925 PF00270 DEAD/DEAH box helicase GNY17_24925 PF00271 Helicase conserved C-terminal domain GNY17_24930 PF09905 DNA-binding protein VF530 GNY17_24935 PF00291 Pyridoxal-phosphate dependent enzyme GNY17_24945 PF01470 Pyroglutamyl peptidase GNY17_24955 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNY17_24955 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNY17_24960 PF00271 Helicase conserved C-terminal domain GNY17_24960 PF00270 DEAD/DEAH box helicase GNY17_24980 PF00563 EAL domain GNY17_24980 PF12792 CSS motif domain associated with EAL GNY17_24985 PF00005 ABC transporter GNY17_24990 PF00672 HAMP domain GNY17_24990 PF12729 Four helix bundle sensory module for signal transduction GNY17_24990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25005 PF03466 LysR substrate binding domain GNY17_25010 PF00884 Sulfatase GNY17_25015 PF13186 Iron-sulfur cluster-binding domain GNY17_25015 PF04055 Radical SAM superfamily GNY17_25020 PF03466 LysR substrate binding domain GNY17_25020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25035 PF12849 PBP superfamily domain GNY17_25045 PF12833 Helix-turn-helix domain GNY17_25050 PF00575 S1 RNA binding domain GNY17_25050 PF08206 Ribonuclease B OB domain GNY17_25050 PF00773 RNB domain GNY17_25055 PF00271 Helicase conserved C-terminal domain GNY17_25055 PF00270 DEAD/DEAH box helicase GNY17_25055 PF03880 DbpA RNA binding domain GNY17_25060 PF00563 EAL domain GNY17_25060 PF00990 Diguanylate cyclase, GGDEF domain GNY17_25060 PF13426 PAS domain GNY17_25070 PF00871 Acetokinase family GNY17_25075 PF13426 PAS domain GNY17_25075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_25075 PF08447 PAS fold GNY17_25085 PF10063 Uncharacterized integral membrane protein (DUF2301) GNY17_25090 PF00682 HMGL-like GNY17_25095 PF00378 Enoyl-CoA hydratase/isomerase GNY17_25100 PF01039 Carboxyl transferase domain GNY17_25105 PF02770 Acyl-CoA dehydrogenase, middle domain GNY17_25105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNY17_25105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNY17_25110 PF00376 MerR family regulatory protein GNY17_25110 PF09278 MerR, DNA binding GNY17_25115 PF02803 Thiolase, C-terminal domain GNY17_25115 PF00108 Thiolase, N-terminal domain GNY17_25120 PF00171 Aldehyde dehydrogenase family GNY17_25130 PF00378 Enoyl-CoA hydratase/isomerase GNY17_25135 PF00378 Enoyl-CoA hydratase/isomerase GNY17_25140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNY17_25140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNY17_25150 PF06481 COX Aromatic Rich Motif GNY17_25150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNY17_25155 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNY17_25160 PF00510 Cytochrome c oxidase subunit III GNY17_25170 PF01040 UbiA prenyltransferase family GNY17_25185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNY17_25190 PF01565 FAD binding domain GNY17_25190 PF08031 Berberine and berberine like GNY17_25195 PF03466 LysR substrate binding domain GNY17_25195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25210 PF03466 LysR substrate binding domain GNY17_25210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25215 PF00005 ABC transporter GNY17_25220 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_25225 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_25230 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_25240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25240 PF03466 LysR substrate binding domain GNY17_25245 PF00043 Glutathione S-transferase, C-terminal domain GNY17_25245 PF02798 Glutathione S-transferase, N-terminal domain GNY17_25260 PF00364 Biotin-requiring enzyme GNY17_25260 PF02817 e3 binding domain GNY17_25260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNY17_25265 PF02779 Transketolase, pyrimidine binding domain GNY17_25265 PF02780 Transketolase, C-terminal domain GNY17_25270 PF00676 Dehydrogenase E1 component GNY17_25285 PF00012 Hsp70 protein GNY17_25290 PF04314 Copper chaperone PCu(A)C GNY17_25315 PF01497 Periplasmic binding protein GNY17_25320 PF01032 FecCD transport family GNY17_25325 PF01032 FecCD transport family GNY17_25330 PF00005 ABC transporter GNY17_25335 PF13411 MerR HTH family regulatory protein GNY17_25350 PF00593 TonB dependent receptor GNY17_25350 PF07715 TonB-dependent Receptor Plug Domain GNY17_25385 PF12805 FUSC-like inner membrane protein yccS GNY17_25390 PF00580 UvrD/REP helicase N-terminal domain GNY17_25390 PF13361 UvrD-like helicase C-terminal domain GNY17_25390 PF12462 DNA helicase IV / RNA helicase N terminal GNY17_25395 PF02142 MGS-like domain GNY17_25400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNY17_25405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_25405 PF00512 His Kinase A (phospho-acceptor) domain GNY17_25405 PF01627 Hpt domain GNY17_25405 PF00072 Response regulator receiver domain GNY17_25405 PF00672 HAMP domain GNY17_25420 PF00486 Transcriptional regulatory protein, C terminal GNY17_25420 PF00072 Response regulator receiver domain GNY17_25425 PF00884 Sulfatase GNY17_25430 PF00884 Sulfatase GNY17_25440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25440 PF03466 LysR substrate binding domain GNY17_25445 PF00884 Sulfatase GNY17_25450 PF13186 Iron-sulfur cluster-binding domain GNY17_25450 PF04055 Radical SAM superfamily GNY17_25455 PF17863 AAA lid domain GNY17_25455 PF07726 ATPase family associated with various cellular activities (AAA) GNY17_25470 PF00092 von Willebrand factor type A domain GNY17_25485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNY17_25490 PF03466 LysR substrate binding domain GNY17_25490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25495 PF00781 Diacylglycerol kinase catalytic domain GNY17_25500 PF04076 Bacterial OB fold (BOF) protein GNY17_25520 PF13186 Iron-sulfur cluster-binding domain GNY17_25520 PF04055 Radical SAM superfamily GNY17_25530 PF18081 Fanconi anemia-associated nuclease SAP domain GNY17_25530 PF08774 VRR-NUC domain GNY17_25550 PF01435 Peptidase family M48 GNY17_25555 PF04011 LemA family GNY17_25560 PF03606 C4-dicarboxylate anaerobic carrier GNY17_25570 PF00583 Acetyltransferase (GNAT) family GNY17_25570 PF00814 Glycoprotease family GNY17_25580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_25580 PF00072 Response regulator receiver domain GNY17_25585 PF00155 Aminotransferase class I and II GNY17_25590 PF01926 50S ribosome-binding GTPase GNY17_25600 PF04151 Bacterial pre-peptidase C-terminal domain GNY17_25600 PF08453 Peptidase family M9 N-terminal GNY17_25600 PF01752 Collagenase GNY17_25610 PF12833 Helix-turn-helix domain GNY17_25615 PF03466 LysR substrate binding domain GNY17_25615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25635 PF04972 BON domain GNY17_25635 PF00263 Bacterial type II and III secretion system protein GNY17_25635 PF13629 Pilus formation protein N terminal region GNY17_25650 PF00437 Type II/IV secretion system protein GNY17_25670 PF13737 Transposase DDE domain GNY17_25695 PF05736 OprF membrane domain GNY17_25695 PF00691 OmpA family GNY17_25705 PF03466 LysR substrate binding domain GNY17_25705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25710 PF03466 LysR substrate binding domain GNY17_25710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_25720 PF09456 RcsC Alpha-Beta-Loop (ABL) GNY17_25720 PF00512 His Kinase A (phospho-acceptor) domain GNY17_25720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_25720 PF00072 Response regulator receiver domain GNY17_25725 PF03707 Bacterial signalling protein N terminal repeat GNY17_25725 PF00990 Diguanylate cyclase, GGDEF domain GNY17_25725 PF00563 EAL domain GNY17_25725 PF13188 PAS domain GNY17_25730 PF00196 Bacterial regulatory proteins, luxR family GNY17_25730 PF00072 Response regulator receiver domain GNY17_25735 PF00990 Diguanylate cyclase, GGDEF domain GNY17_25745 PF00072 Response regulator receiver domain GNY17_25745 PF00196 Bacterial regulatory proteins, luxR family GNY17_25770 PF01584 CheW-like domain GNY17_25770 PF00072 Response regulator receiver domain GNY17_25790 PF00892 EamA-like transporter family GNY17_25805 PF01569 PAP2 superfamily GNY17_25815 PF03413 Peptidase propeptide and YPEB domain GNY17_25815 PF07504 Fungalysin/Thermolysin Propeptide Motif GNY17_25815 PF01447 Thermolysin metallopeptidase, catalytic domain GNY17_25815 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNY17_25815 PF04151 Bacterial pre-peptidase C-terminal domain GNY17_25820 PF00893 Small Multidrug Resistance protein GNY17_25825 PF00892 EamA-like transporter family GNY17_25845 PF00171 Aldehyde dehydrogenase family GNY17_25850 PF00939 Sodium:sulfate symporter transmembrane region GNY17_25855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_25855 PF00989 PAS fold GNY17_25855 PF17203 Single cache domain 3 GNY17_25855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNY17_25860 PF00072 Response regulator receiver domain GNY17_25860 PF12431 Transcriptional regulator GNY17_25870 PF13187 4Fe-4S dicluster domain GNY17_25870 PF01645 Conserved region in glutamate synthase GNY17_25880 PF00141 Peroxidase GNY17_25895 PF01757 Acyltransferase family GNY17_25905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNY17_25910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNY17_25930 PF03448 MgtE intracellular N domain GNY17_25930 PF00571 CBS domain GNY17_25930 PF01769 Divalent cation transporter GNY17_25960 PF01327 Polypeptide deformylase GNY17_25965 PF00376 MerR family regulatory protein GNY17_25965 PF09278 MerR, DNA binding GNY17_25980 PF02253 Phospholipase A1 GNY17_26000 PF00664 ABC transporter transmembrane region GNY17_26000 PF00005 ABC transporter GNY17_26010 PF14480 DNA polymerase III polC-type N-terminus I GNY17_26010 PF02811 PHP domain GNY17_26010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNY17_26010 PF00929 Exonuclease GNY17_26010 PF14579 Helix-hairpin-helix motif GNY17_26010 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNY17_26010 PF11490 DNA polymerase III polC-type N-terminus II GNY17_26015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_26015 PF03466 LysR substrate binding domain GNY17_26020 PF17848 Acetyl-coA carboxylase zinc finger domain GNY17_26020 PF01039 Carboxyl transferase domain GNY17_26070 PF02347 Glycine cleavage system P-protein GNY17_26075 PF01597 Glycine cleavage H-protein GNY17_26080 PF00464 Serine hydroxymethyltransferase GNY17_26090 PF01571 Aminomethyltransferase folate-binding domain GNY17_26090 PF08669 Glycine cleavage T-protein C-terminal barrel domain GNY17_26110 PF00873 AcrB/AcrD/AcrF family GNY17_26120 PF02378 Phosphotransferase system, EIIC GNY17_26120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNY17_26125 PF00294 pfkB family carbohydrate kinase GNY17_26130 PF00381 PTS HPr component phosphorylation site GNY17_26130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNY17_26135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNY17_26135 PF00356 Bacterial regulatory proteins, lacI family GNY17_26155 PF01590 GAF domain GNY17_26155 PF00990 Diguanylate cyclase, GGDEF domain GNY17_26155 PF00989 PAS fold GNY17_26155 PF00563 EAL domain GNY17_26160 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_26165 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNY17_26170 PF00528 Binding-protein-dependent transport system inner membrane component GNY17_26175 PF00005 ABC transporter GNY17_26180 PF00224 Pyruvate kinase, barrel domain GNY17_26180 PF02887 Pyruvate kinase, alpha/beta domain GNY17_26185 PF07690 Major Facilitator Superfamily GNY17_26195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNY17_26195 PF00672 HAMP domain GNY17_26195 PF00512 His Kinase A (phospho-acceptor) domain GNY17_26200 PF02954 Bacterial regulatory protein, Fis family GNY17_26200 PF14532 Sigma-54 interaction domain GNY17_26200 PF00072 Response regulator receiver domain GNY17_26210 PF00465 Iron-containing alcohol dehydrogenase GNY17_26215 PF06719 AraC-type transcriptional regulator N-terminus GNY17_26215 PF12833 Helix-turn-helix domain GNY17_26225 PF06483 Chitinase C GNY17_26225 PF00704 Glycosyl hydrolases family 18 GNY17_26230 PF00483 Nucleotidyl transferase GNY17_26235 PF01268 Formate--tetrahydrofolate ligase GNY17_26240 PF00294 pfkB family carbohydrate kinase GNY17_26260 PF11849 Domain of unknown function (DUF3369) GNY17_26270 PF13419 Haloacid dehalogenase-like hydrolase GNY17_26275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNY17_26285 PF04336 Acyl carrier protein phosphodiesterase GNY17_26290 PF00270 DEAD/DEAH box helicase GNY17_26290 PF00271 Helicase conserved C-terminal domain GNY17_26295 PF12792 CSS motif domain associated with EAL GNY17_26295 PF00563 EAL domain GNY17_26310 PF01292 Prokaryotic cytochrome b561 GNY17_26315 PF04264 YceI-like domain GNY17_26320 PF01226 Formate/nitrite transporter GNY17_26325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_26325 PF03466 LysR substrate binding domain GNY17_26330 PF06496 Protein of unknown function (DUF1097) GNY17_26335 PF11398 Protein of unknown function (DUF2813) GNY17_26340 PF00149 Calcineurin-like phosphoesterase GNY17_26340 PF02872 5'-nucleotidase, C-terminal domain GNY17_26345 PF03741 Integral membrane protein TerC family GNY17_26360 PF12262 Bacterial virulence factor lipase N-terminal GNY17_26365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GNY17_26380 PF03061 Thioesterase superfamily GNY17_26390 PF12793 Sugar transport-related sRNA regulator N-term GNY17_26390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNY17_26415 PF00226 DnaJ domain GNY17_26415 PF00684 DnaJ central domain GNY17_26415 PF01556 DnaJ C terminal domain GNY17_26425 PF00990 Diguanylate cyclase, GGDEF domain GNY17_26425 PF03707 Bacterial signalling protein N terminal repeat GNY17_26425 PF13188 PAS domain GNY17_26425 PF00563 EAL domain GNY17_26430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GNY17_26430 PF07055 Enoyl reductase FAD binding domain GNY17_26430 PF12241 Trans-2-enoyl-CoA reductase catalytic region GNY17_26435 PF13472 GDSL-like Lipase/Acylhydrolase family GNY17_26440 PF00005 ABC transporter GNY17_26455 PF02626 Carboxyltransferase domain, subdomain A and B GNY17_26460 PF02682 Carboxyltransferase domain, subdomain C and D GNY17_26465 PF03746 LamB/YcsF family GNY17_26470 PF13426 PAS domain GNY17_26470 PF08448 PAS fold GNY17_26470 PF08447 PAS fold GNY17_26470 PF05231 MASE1 GNY17_26470 PF00990 Diguanylate cyclase, GGDEF domain GNY17_26470 PF00563 EAL domain GNY17_26475 PF16363 GDP-mannose 4,6 dehydratase GNY17_26485 PF04886 PT repeat GNY17_26485 PF07715 TonB-dependent Receptor Plug Domain GNY17_26485 PF00593 TonB dependent receptor GNY17_26490 PF03466 LysR substrate binding domain GNY17_26490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_26495 PF13380 CoA binding domain GNY17_26495 PF13607 Succinyl-CoA ligase like flavodoxin domain GNY17_26495 PF00583 Acetyltransferase (GNAT) family GNY17_26505 PF07478 D-ala D-ala ligase C-terminus GNY17_26505 PF01820 D-ala D-ala ligase N-terminus GNY17_26515 PF01253 Translation initiation factor SUI1 GNY17_26520 PF05707 Zonular occludens toxin (Zot) GNY17_26565 PF05707 Zonular occludens toxin (Zot) GNY17_26755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNY17_26755 PF03466 LysR substrate binding domain GNY17_26765 PF00582 Universal stress protein family GNY17_26770 PF03701 Uncharacterised protein family (UPF0181) GNY17_26800 PF00691 OmpA family GNY17_26835 PF01389 OmpA-like transmembrane domain GNY17_26835 PF00691 OmpA family GNY17_26840 PF02368 Bacterial Ig-like domain (group 2) GNY17_26840 PF11999 Protein of unknown function (DUF3494) GNY17_26865 PF02796 Helix-turn-helix domain of resolvase GNY17_26865 PF00239 Resolvase, N terminal domain GNY17_26880 PF01131 DNA topoisomerase GNY17_26880 PF01751 Toprim domain GNY17_26935 PF01464 Transglycosylase SLT domain GNY17_26940 PF10502 Signal peptidase, peptidase S26 GNY17_26945 PF01848 Hok/gef family GNY17_26985 PF00437 Type II/IV secretion system protein GNY17_27010 PF03743 Bacterial conjugation TrbI-like protein GNY17_27020 PF03524 Conjugal transfer protein GNY17_27040 PF00437 Type II/IV secretion system protein GNY17_27050 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GNY17_27055 PF05101 Type IV secretory pathway, VirB3-like protein GNY17_27060 PF04956 TrbC/VIRB2 family GNY17_27085 PF02796 Helix-turn-helix domain of resolvase GNY17_27085 PF00239 Resolvase, N terminal domain GNY17_27090 PF13614 AAA domain GNY17_27095 PF08775 ParB family GNY17_27095 PF02195 ParB-like nuclease domain GNY17_27120 PF00239 Resolvase, N terminal domain GNY17_27120 PF02796 Helix-turn-helix domain of resolvase GNY17_27160 PF13362 Toprim domain GNY17_27160 PF18818 Metallopeptidase superfamily domain GNY17_27160 PF08401 Domain of unknown function (DUF1738) GNY17_27180 PF02796 Helix-turn-helix domain of resolvase GNY17_27180 PF00239 Resolvase, N terminal domain GNY17_27235 PF00691 OmpA family GNY17_27235 PF01389 OmpA-like transmembrane domain GNY17_27285 PF08525 Opacity-associated protein A N-terminal motif GNY17_27285 PF01551 Peptidase family M23 GNY17_27285 PF01476 LysM domain GNY17_27300 PF02954 Bacterial regulatory protein, Fis family GNY17_27320 PF11999 Protein of unknown function (DUF3494) GNY17_27320 PF02368 Bacterial Ig-like domain (group 2) GNY17_27340 PF00589 Phage integrase family GNY17_27340 PF02899 Phage integrase, N-terminal SAM-like domain GNY17_27350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GNY17_27390 PF01131 DNA topoisomerase GNY17_27390 PF01751 Toprim domain GNY17_27420 PF13362 Toprim domain GNY17_27420 PF18818 Metallopeptidase superfamily domain GNY17_27420 PF08401 Domain of unknown function (DUF1738) GNY17_27450 PF01848 Hok/gef family GNY17_27475 PF07669 Eco57I restriction-modification methylase GNY17_27475 PF02384 N-6 DNA Methylase GNY17_27480 PF13737 Transposase DDE domain GNY17_27515 PF13737 Transposase DDE domain GNY17_27540 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system GNY17_27565 PF13614 AAA domain GNY17_27570 PF04754 Putative transposase, YhgA-like GNY17_27590 PF04956 TrbC/VIRB2 family GNY17_27595 PF05101 Type IV secretory pathway, VirB3-like protein GNY17_27600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GNY17_27610 PF00437 Type II/IV secretion system protein GNY17_27625 PF03524 Conjugal transfer protein GNY17_27635 PF03743 Bacterial conjugation TrbI-like protein GNY17_27660 PF00437 Type II/IV secretion system protein GNY17_27700 PF01848 Hok/gef family GNY17_27720 PF01464 Transglycosylase SLT domain