locus-tag	class	description
GNY17_00005	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNY17_00010	COG0840	transmembrane signaling receptor activity
GNY17_00030	COG1448	Aminotransferase
GNY17_00055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNY17_00065	COG0017	Asparaginyl-tRNA synthetase
GNY17_00070	COG0840	transmembrane signaling receptor activity
GNY17_00075	COG0720	synthase
GNY17_00085	COG2200	EAL domain
GNY17_00090	COG1760	l-serine dehydratase
GNY17_00095	COG0814	amino acid
GNY17_00100	COG0494	nUDIX hydrolase
GNY17_00110	COG0784	Response regulator, receiver
GNY17_00110	COG2205	protein histidine kinase activity
GNY17_00115	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GNY17_00135	COG3106	COG3106 Predicted ATPase
GNY17_00140	COG3768	UPF0283 membrane protein
GNY17_00150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNY17_00255	COG0251	oxidation-reduction process
GNY17_00350	COG2732	(Barnase) inhibitor
GNY17_00575	COG0251	oxidation-reduction process
GNY17_00780	COG1335	isochorismatase
GNY17_00785	COG0456	acetyltransferase
GNY17_00805	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GNY17_00880	COG1192	Involved in chromosome partitioning
GNY17_00970	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
GNY17_01085	COG1280	lysine exporter protein (LysE YggA)
GNY17_01350	COG2801	Transposase and inactivated derivatives
GNY17_01400	COG1757	Na H antiporter
GNY17_01405	COG0174	glutamine synthetase
GNY17_01415	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
GNY17_01420	COG1917	Cupin 2, conserved barrel domain protein
GNY17_01420	COG1396	sequence-specific DNA binding
GNY17_01425	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_01430	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNY17_01440	COG2957	Belongs to the agmatine deiminase family
GNY17_01445	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_01450	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GNY17_01455	COG1227	inorganic diphosphatase activity
GNY17_01465	COG2200	EAL domain
GNY17_01465	COG2771	luxR family
GNY17_01475	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GNY17_01490	COG1846	Transcriptional regulator
GNY17_01495	COG2315	Protein conserved in bacteria
GNY17_01515	COG0110	maltose O-acetyltransferase activity
GNY17_01545	COG3063	Type IV pilus biogenesis stability protein PilW
GNY17_01550	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
GNY17_01565	COG0531	amino acid
GNY17_01575	COG1560	Kdo2-lipid A biosynthetic process
GNY17_01580	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
GNY17_01585	COG1280	lysine exporter protein (LysE YggA)
GNY17_01595	COG1115	amino acid carrier protein
GNY17_01620	COG1368	sulfuric ester hydrolase activity
GNY17_01625	COG0642	Histidine kinase
GNY17_01630	COG0745	RESPONSE REGULATOR receiver
GNY17_01640	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_01660	COG2113	Glycine betaine
GNY17_01665	COG4176	ABC-type proline glycine betaine transport system permease component
GNY17_01685	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNY17_01690	COG0456	acetyltransferase
GNY17_01695	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GNY17_01700	COG0662	Cupin 2, conserved barrel domain protein
GNY17_01705	COG0527	aspartate kinase activity
GNY17_01710	COG1858	cytochrome C peroxidase
GNY17_01725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_01740	COG3290	protein histidine kinase activity
GNY17_01745	COG4565	transcriptional regulatory protein
GNY17_01880	COG1475	DNA binding
GNY17_01900	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GNY17_01915	COG1783	phage Terminase large subunit
GNY17_02115	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GNY17_02120	COG0363	glucosamine-6-phosphate deaminase activity
GNY17_02125	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GNY17_02155	COG3284	Transcriptional regulator
GNY17_02160	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_02230	COG4669	(LipO)protein
GNY17_02260	COG3423	Transcriptional regulator
GNY17_02325	COG3012	SEC-C Motif Domain Protein
GNY17_02550	COG1073	alpha beta
GNY17_02555	COG1073	alpha beta
GNY17_02565	COG4792	protein secretion
GNY17_02570	COG4791	protein targeting
GNY17_02575	COG4794	Type iii secretion
GNY17_02580	COG4790	Type iii secretion
GNY17_02585	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNY17_02650	COG0457	Tetratricopeptide repeat
GNY17_02670	COG0730	response to heat
GNY17_02700	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
GNY17_02705	COG0372	Belongs to the citrate synthase family
GNY17_02715	COG2828	Protein conserved in bacteria
GNY17_02740	COG0561	phosphatase activity
GNY17_02745	COG0602	queuosine metabolic process
GNY17_02750	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GNY17_02755	COG3706	GGDEF domain
GNY17_02795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GNY17_02800	COG0840	transmembrane signaling receptor activity
GNY17_02805	COG1254	Belongs to the acylphosphatase family
GNY17_02810	COG2920	part of a sulfur-relay system
GNY17_02820	COG0670	Belongs to the BI1 family
GNY17_02825	COG1126	abc transporter atp-binding protein
GNY17_02830	COG0765	amino acid transport
GNY17_02835	COG4597	amino acid ABC transporter
GNY17_02840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_02855	COG1666	GTP binding
GNY17_02860	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GNY17_02880	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
GNY17_02880	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GNY17_02885	COG3008	intermembrane lipid transfer
GNY17_02890	COG2995	paraquat-inducible protein a
GNY17_02895	COG1132	(ABC) transporter
GNY17_02900	COG1956	GAF domain-containing protein
GNY17_02905	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
GNY17_02920	COG0308	aminopeptidase N
GNY17_02930	COG2902	Dehydrogenase
GNY17_02935	COG0167	dihydroorotate dehydrogenase activity
GNY17_02950	COG0116	Belongs to the methyltransferase superfamily
GNY17_02950	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GNY17_02975	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GNY17_02980	COG1067	ATP-dependent peptidase activity
GNY17_02985	COG3120	sequence-specific DNA binding
GNY17_03015	COG3278	Belongs to the heme-copper respiratory oxidase family
GNY17_03030	COG2010	Cytochrome c
GNY17_03040	COG2217	Heavy metal translocating P-type atpase
GNY17_03055	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNY17_03060	COG0589	response to stress
GNY17_03070	COG0037	tRNA processing
GNY17_03090	COG3842	ATPase activity
GNY17_03095	COG1176	ABC-type spermidine putrescine transport system, permease component I
GNY17_03100	COG1177	transmembrane transport
GNY17_03105	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GNY17_03110	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GNY17_03115	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GNY17_03125	COG0004	ammonium transporteR
GNY17_03150	COG0437	4 iron, 4 sulfur cluster binding
GNY17_03155	COG0243	molybdopterin cofactor binding
GNY17_03155	COG3383	formate dehydrogenase (NAD+) activity
GNY17_03165	COG3381	protein complex oligomerization
GNY17_03190	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GNY17_03195	COG0488	(ABC) transporter
GNY17_03205	COG4191	Histidine kinase
GNY17_03210	COG2204	response regulator
GNY17_03230	COG3842	ATPase activity
GNY17_03235	COG0746	molybdenum cofactor guanylyltransferase activity
GNY17_03240	COG0303	'Molybdopterin
GNY17_03250	COG1940	carbohydrate kinase activity
GNY17_03295	COG0791	NLP P60 protein
GNY17_03305	COG3706	GGDEF domain
GNY17_03310	COG2201	protein-glutamate methylesterase activity
GNY17_03325	COG0307	riboflavin synthase, alpha
GNY17_03330	COG0534	Mate efflux family protein
GNY17_03340	COG1793	dna ligase
GNY17_03375	COG2204	response regulator
GNY17_03420	COG0438	transferase activity, transferring glycosyl groups
GNY17_03425	COG1215	transferase activity, transferring glycosyl groups
GNY17_03430	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GNY17_03440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNY17_03455	COG1643	Atp-dependent helicase
GNY17_03460	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GNY17_03475	COG3302	dmso reductase anchor subunit
GNY17_03480	COG0437	4 iron, 4 sulfur cluster binding
GNY17_03485	COG0243	molybdopterin cofactor binding
GNY17_03525	COG0443	Heat shock 70 kDa protein
GNY17_03530	COG0443	Heat shock 70 kDa protein
GNY17_03560	COG1132	(ABC) transporter
GNY17_03565	COG1132	(ABC) transporter
GNY17_03590	COG0814	amino acid
GNY17_03605	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
GNY17_03685	COG1522	sequence-specific DNA binding
GNY17_03720	COG0515	serine threonine protein kinase
GNY17_03745	COG3501	Rhs element vgr protein
GNY17_03765	COG2885	chlorophyll binding
GNY17_03785	COG0739	heme binding
GNY17_03795	COG0861	Integral membrane protein TerC family
GNY17_03805	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNY17_03810	COG1328	CTP reductase activity
GNY17_03815	COG1280	lysine exporter protein (LysE YggA)
GNY17_03825	COG3300	MHYT domain
GNY17_03825	COG5001	Diguanylate cyclase
GNY17_03835	COG4191	Histidine kinase
GNY17_03835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_03840	COG0471	metal ion transport
GNY17_03875	COG0583	DNA-binding transcription factor activity
GNY17_03880	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
GNY17_03940	COG0625	glutathione transferase activity
GNY17_03950	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
GNY17_03960	COG2195	Cleaves the N-terminal amino acid of tripeptides
GNY17_03970	COG0601	transmembrane transport
GNY17_03975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNY17_03980	COG0444	Belongs to the ABC transporter superfamily
GNY17_04000	COG3291	Pkd domain containing protein
GNY17_04010	COG1177	transmembrane transport
GNY17_04015	COG1176	ABC-type spermidine putrescine transport system, permease component I
GNY17_04020	COG3842	ATPase activity
GNY17_04025	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GNY17_04030	COG2423	ornithine cyclodeaminase activity
GNY17_04050	COG3938	Belongs to the proline racemase family
GNY17_04080	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
GNY17_04085	COG1451	nucleotide metabolic process
GNY17_04095	COG0583	DNA-binding transcription factor activity
GNY17_04115	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
GNY17_04120	COG4139	cobalamin transport
GNY17_04125	COG2988	succinylglutamate desuccinylase activity
GNY17_04140	COG2062	phosphohistidine phosphatase, SixA
GNY17_04150	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
GNY17_04155	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
GNY17_04160	COG0702	epimerase
GNY17_04170	COG2925	Exonuclease
GNY17_04175	COG1380	Effector of murein hydrolase LrgA
GNY17_04180	COG1346	cytolysis
GNY17_04185	COG0295	cytidine deaminase activity
GNY17_04190	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GNY17_04195	COG0500	methyltransferase
GNY17_04205	COG0776	regulation of translation
GNY17_04220	COG0072	phenylalanine-tRNA ligase activity
GNY17_04220	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNY17_04225	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GNY17_04230	COG3706	GGDEF domain
GNY17_04260	COG0393	Putative heavy-metal-binding
GNY17_04270	COG0291	Belongs to the bacterial ribosomal protein bL35 family
GNY17_04280	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GNY17_04295	COG2188	Transcriptional regulator
GNY17_04300	COG1228	amidohydrolase
GNY17_04305	COG0010	Belongs to the arginase family
GNY17_04310	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
GNY17_04315	COG2986	histidine ammonia-lyase
GNY17_04330	COG0277	FAD linked oxidase domain protein
GNY17_04330	COG0247	lactate metabolic process
GNY17_04365	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GNY17_04380	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
GNY17_04385	COG1643	Atp-dependent helicase
GNY17_04390	COG0281	malic enzyme
GNY17_04395	COG2949	membrane
GNY17_04400	COG0471	metal ion transport
GNY17_04405	COG3706	GGDEF domain
GNY17_04405	COG0745	RESPONSE REGULATOR receiver
GNY17_04425	COG0492	ferredoxin-NADP+ reductase activity
GNY17_04430	COG4988	ABC transporter
GNY17_04435	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GNY17_04440	COG3048	D-serine ammonia-lyase activity
GNY17_04445	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GNY17_04455	COG4191	Histidine kinase
GNY17_04455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_04470	COG3070	regulator of competence-specific genes
GNY17_04485	COG2431	L-lysine efflux transmembrane transporter activity
GNY17_04495	COG0076	glutamate decarboxylase activity
GNY17_04500	COG1737	Transcriptional regulator
GNY17_04515	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GNY17_04520	COG2985	domain, Protein
GNY17_04520	COG3273	potassium ion transport
GNY17_04525	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
GNY17_04540	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GNY17_04555	COG4181	ATPase activity
GNY17_04560	COG0534	Mate efflux family protein
GNY17_04565	COG0702	epimerase
GNY17_04570	COG3005	denitrification pathway
GNY17_04600	COG2814	Major facilitator Superfamily
GNY17_04605	COG1187	pseudouridine synthase activity
GNY17_04610	COG1061	Type III restriction enzyme res subunit
GNY17_04620	COG0745	RESPONSE REGULATOR receiver
GNY17_04625	COG2205	protein histidine kinase activity
GNY17_04630	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GNY17_04660	COG3313	Fe-S protein
GNY17_04685	COG0493	'glutamate synthase
GNY17_04695	COG0398	Pfam SNARE associated Golgi protein
GNY17_04700	COG4134	Bacterial extracellular solute-binding protein
GNY17_04705	COG4135	transport system, permease component
GNY17_04710	COG4136	ATPase activity
GNY17_04715	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GNY17_04730	COG3604	Transcriptional regulator
GNY17_04735	COG1151	hydroxylamine reductase activity
GNY17_04740	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GNY17_04750	COG0564	pseudouridine synthase activity
GNY17_04760	COG0733	neurotransmitter:sodium symporter activity
GNY17_04770	COG0626	cystathionine gamma-synthase activity
GNY17_04775	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
GNY17_04780	COG5380	lipid catabolic process
GNY17_04785	COG2818	Glycosylase
GNY17_04800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_04805	COG1983	PspC domain protein
GNY17_04815	COG1842	Phage shock protein A
GNY17_04820	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
GNY17_04830	COG4168	peptide transport system, permease
GNY17_04835	COG4171	peptide transport system, permease
GNY17_04845	COG4172	Belongs to the ABC transporter superfamily
GNY17_04855	COG1227	inorganic diphosphatase activity
GNY17_04870	COG0243	molybdopterin cofactor binding
GNY17_04875	COG3005	denitrification pathway
GNY17_04880	COG4459	periplasmic nitrate reductase
GNY17_04885	COG0390	transport system, permease component
GNY17_04895	COG2116	formate transmembrane transporter activity
GNY17_04920	COG1434	Gram-negative-bacterium-type cell wall biogenesis
GNY17_04925	COG1435	thymidine kinase activity
GNY17_04930	COG0215	cysteine-tRNA ligase activity
GNY17_04935	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GNY17_04940	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GNY17_04945	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
GNY17_04955	COG3012	SEC-C Motif Domain Protein
GNY17_04960	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GNY17_04960	COG0140	phosphoribosyl-ATP diphosphatase activity
GNY17_04965	COG0107	imidazoleglycerol-phosphate synthase activity
GNY17_04970	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GNY17_04975	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GNY17_04980	COG0131	Imidazoleglycerol-phosphate dehydratase
GNY17_04980	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GNY17_04985	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GNY17_04990	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GNY17_04995	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
GNY17_05010	COG1757	Na H antiporter
GNY17_05020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNY17_05030	COG0482	sulfurtransferase activity
GNY17_05035	COG2915	High frequency lysogenization protein hflD homolog
GNY17_05040	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GNY17_05065	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GNY17_05080	COG0300	oxidoreductase activity
GNY17_05090	COG0501	Belongs to the peptidase M48B family
GNY17_05100	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
GNY17_05110	COG0156	8-amino-7-oxononanoate synthase activity
GNY17_05115	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
GNY17_05120	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GNY17_05125	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GNY17_05140	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GNY17_05145	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GNY17_05150	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GNY17_05155	COG1674	ftsk spoiiie
GNY17_05165	COG0686	Belongs to the AlaDH PNT family
GNY17_05175	COG0583	DNA-binding transcription factor activity
GNY17_05230	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNY17_05235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_05250	COG0840	transmembrane signaling receptor activity
GNY17_05325	COG0784	Response regulator, receiver
GNY17_05325	COG5002	protein histidine kinase activity
GNY17_05335	COG0754	glutathionylspermidine amidase activity
GNY17_05355	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GNY17_05360	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
GNY17_05365	COG2885	chlorophyll binding
GNY17_05370	COG0823	Involved in the tonB-independent uptake of proteins
GNY17_05385	COG0811	peptide transport
GNY17_05390	COG0824	Thioesterase
GNY17_05400	COG4890	Cyd operon protein YbgT
GNY17_05405	COG1294	oxidase, subunit
GNY17_05410	COG1271	oxidase subunit
GNY17_05415	COG2255	four-way junction helicase activity
GNY17_05420	COG0632	four-way junction helicase activity
GNY17_05425	COG0840	transmembrane signaling receptor activity
GNY17_05430	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GNY17_05435	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GNY17_05440	COG1801	Protein of unknown function DUF72
GNY17_05445	COG4106	trans-aconitate 2-methyltransferase activity
GNY17_05450	COG0500	methyltransferase
GNY17_05460	COG0189	ligase activity
GNY17_05460	COG4067	protein conserved in archaea
GNY17_05480	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
GNY17_05485	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
GNY17_05490	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
GNY17_05495	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GNY17_05500	COG1434	Gram-negative-bacterium-type cell wall biogenesis
GNY17_05505	COG0745	RESPONSE REGULATOR receiver
GNY17_05510	COG3381	protein complex oligomerization
GNY17_05515	COG1609	Transcriptional regulator
GNY17_05520	COG3070	regulator of competence-specific genes
GNY17_05540	COG0297	glycogen (starch) synthase activity
GNY17_05545	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GNY17_05550	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GNY17_05560	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
GNY17_05570	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
GNY17_05575	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
GNY17_05580	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GNY17_05590	COG0542	response to heat
GNY17_05595	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
GNY17_05600	COG1278	Cold shock
GNY17_05610	COG1187	pseudouridine synthase activity
GNY17_05615	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
GNY17_05625	COG1199	ATP-dependent helicase activity
GNY17_05630	COG0730	response to heat
GNY17_05635	COG3923	Primosomal replication protein n
GNY17_05645	COG0708	Exodeoxyribonuclease III
GNY17_05660	COG4215	(ABC) transporter
GNY17_05690	COG1882	Formate acetyltransferase
GNY17_05700	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNY17_05710	COG3013	Belongs to the UPF0304 family
GNY17_05720	COG2766	serine protein kinase
GNY17_05725	COG2718	Belongs to the UPF0229 family
GNY17_05730	COG2719	SpoVR family
GNY17_05735	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
GNY17_05745	COG1663	tetraacyldisaccharide 4'-kinase activity
GNY17_05750	COG1132	(ABC) transporter
GNY17_05755	COG2333	competence protein COMEC
GNY17_05755	COG0658	competence protein
GNY17_05765	COG4591	ABC-type transport system involved in lipoprotein release permease component
GNY17_05770	COG1136	(ABC) transporter
GNY17_05775	COG4591	ABC-type transport system involved in lipoprotein release permease component
GNY17_05785	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GNY17_05800	COG1252	NADH dehydrogenase
GNY17_05810	COG3150	esterase
GNY17_05835	COG0537	adenosine 5'-monophosphoramidase activity
GNY17_05865	COG0516	GMP reductase activity
GNY17_05865	COG0517	IMP dehydrogenase activity
GNY17_05875	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
GNY17_05880	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
GNY17_05885	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNY17_05940	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
GNY17_06005	COG2199	diguanylate cyclase activity
GNY17_06020	COG3126	Type III secretion system lipoprotein chaperone (YscW)
GNY17_06025	COG1946	Acyl-CoA thioesterase
GNY17_06035	COG1522	sequence-specific DNA binding
GNY17_06065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNY17_06115	COG0477	Major facilitator Superfamily
GNY17_06120	COG2855	membrane
GNY17_06135	COG1441	menaquinone biosynthetic process
GNY17_06140	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GNY17_06145	COG0596	Alpha beta hydrolase
GNY17_06150	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
GNY17_06155	COG1169	isochorismate synthase
GNY17_06160	COG0436	Aminotransferase
GNY17_06165	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
GNY17_06170	COG0232	Belongs to the dGTPase family. Type 2 subfamily
GNY17_06185	COG1555	photosystem II stabilization
GNY17_06190	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GNY17_06195	COG0776	regulation of translation
GNY17_06200	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GNY17_06205	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GNY17_06215	COG0544	peptidyl-prolyl cis-trans isomerase activity
GNY17_06225	COG2204	response regulator
GNY17_06235	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GNY17_06240	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GNY17_06245	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GNY17_06250	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
GNY17_06270	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNY17_06275	COG0569	domain protein
GNY17_06280	COG0513	Belongs to the DEAD box helicase family
GNY17_06285	COG1253	flavin adenine dinucleotide binding
GNY17_06320	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GNY17_06325	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GNY17_06340	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GNY17_06345	COG1216	Glycosyl transferase, family 2
GNY17_06350	COG2986	histidine ammonia-lyase
GNY17_06375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GNY17_06380	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GNY17_06385	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_06405	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GNY17_06410	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNY17_06415	COG0583	DNA-binding transcription factor activity
GNY17_06420	COG2951	lytic endotransglycosylase activity
GNY17_06425	COG3100	YcgL domain-containing protein
GNY17_06430	COG0850	regulation of cytokinetic process
GNY17_06435	COG2894	cell division
GNY17_06440	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
GNY17_06445	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
GNY17_06450	COG0318	PFAM AMP-dependent synthetase and ligase
GNY17_06455	COG2267	carboxylic ester hydrolase activity
GNY17_06470	COG1214	PFAM Peptidase M22, glycoprotease
GNY17_06475	COG1199	ATP-dependent helicase activity
GNY17_06480	COG0788	formyltetrahydrofolate deformylase activity
GNY17_06485	COG3102	Protein conserved in bacteria
GNY17_06495	COG0018	arginyl-trna synthetase
GNY17_06515	COG1918	ferrous iron import across plasma membrane
GNY17_06530	COG4977	sequence-specific DNA binding
GNY17_06535	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
GNY17_06540	COG1121	(ABC) transporter
GNY17_06545	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GNY17_06555	COG0045	succinate-CoA ligase (ADP-forming) activity
GNY17_06560	COG0508	dehydrogenase complex catalyzes the overall conversion of
GNY17_06565	COG0567	Dehydrogenase, E1 component
GNY17_06570	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GNY17_06575	COG1053	succinate dehydrogenase
GNY17_06580	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
GNY17_06585	COG2009	succinate dehydrogenase
GNY17_06595	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GNY17_06605	COG0033	Phosphoglucomutase
GNY17_06610	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
GNY17_06615	COG0596	Alpha beta hydrolase
GNY17_06625	COG0716	FMN binding
GNY17_06635	COG0735	belongs to the Fur family
GNY17_06640	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GNY17_06645	COG2190	(PTS) system
GNY17_06645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNY17_06645	COG1263	PTS System
GNY17_06655	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GNY17_06660	COG1846	Transcriptional regulator
GNY17_06660	COG1940	carbohydrate kinase activity
GNY17_06665	COG4651	solute:proton antiporter activity
GNY17_06665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GNY17_06670	COG0367	asparagine synthase
GNY17_06675	COG0250	Participates in transcription elongation, termination and antitermination
GNY17_06680	COG3104	oligopeptide transport
GNY17_06685	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
GNY17_06690	COG0563	adenylate kinase activity
GNY17_06695	COG0326	Molecular chaperone. Has ATPase activity
GNY17_06700	COG3710	Transcriptional regulator
GNY17_06720	COG0622	Phosphoesterase
GNY17_06750	COG1090	epimerase
GNY17_06755	COG0300	oxidoreductase activity
GNY17_06765	COG3118	belongs to the thioredoxin family
GNY17_06770	COG0330	HflC and HflK could
GNY17_06795	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GNY17_06800	COG3115	cell septum assembly
GNY17_06805	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
GNY17_06810	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GNY17_06820	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_06825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GNY17_06830	COG2190	(PTS) system
GNY17_06840	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_06845	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_06855	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_06865	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_06875	COG3951	Flagellar rod assembly protein muramidase FlgJ
GNY17_06875	COG1705	Flagellar rod assembly protein muramidase FlgJ
GNY17_06880	COG1706	bacterial-type flagellum-dependent cell motility
GNY17_06885	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GNY17_06890	COG4786	Flagellar basal body rod
GNY17_06895	COG4787	bacterial-type flagellum-dependent cell motility
GNY17_06905	COG1749	Flagellar hook protein flgE
GNY17_06910	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GNY17_06915	COG1558	bacterial-type flagellum-dependent cell motility
GNY17_06920	COG1815	bacterial-type flagellum-dependent cell motility
GNY17_06925	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GNY17_06930	COG0784	Response regulator, receiver
GNY17_06930	COG0835	chemotaxis
GNY17_06990	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GNY17_06995	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
GNY17_07010	COG2608	mercury ion transmembrane transporter activity
GNY17_07010	COG2217	Heavy metal translocating P-type atpase
GNY17_07050	COG2840	Smr protein MutS2
GNY17_07055	COG1187	pseudouridine synthase activity
GNY17_07065	COG0737	Belongs to the 5'-nucleotidase family
GNY17_07070	COG2877	3-deoxy-8-phosphooctulonate synthase activity
GNY17_07075	COG2912	Transglutaminase-like superfamily
GNY17_07080	COG3094	Invasion gene expression up-regulator, SirB
GNY17_07085	COG2890	protein-(glutamine-N5) methyltransferase activity
GNY17_07090	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GNY17_07095	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GNY17_07100	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
GNY17_07105	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GNY17_07110	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GNY17_07115	COG0193	aminoacyl-tRNA hydrolase activity
GNY17_07120	COG0012	GTP binding
GNY17_07235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GNY17_07245	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GNY17_07250	COG1702	phosphate starvation-inducible protein PhoH
GNY17_07255	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GNY17_07260	COG4535	Mg2 and Co2 transporter CorC
GNY17_07265	COG0815	Transfers the fatty acyl group on membrane lipoproteins
GNY17_07270	COG2888	peptidyl-tyrosine sulfation
GNY17_07275	COG0495	leucyl-tRNA aminoacylation
GNY17_07280	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
GNY17_07285	COG1466	dna polymerase III delta subunit
GNY17_07290	COG0799	negative regulation of ribosome biogenesis
GNY17_07295	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GNY17_07300	COG0768	penicillin binding
GNY17_07305	COG0772	Belongs to the SEDS family
GNY17_07310	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GNY17_07315	COG1686	Belongs to the peptidase S11 family
GNY17_07320	COG2921	Belongs to the UPF0250 family
GNY17_07325	COG0321	lipoyl(octanoyl) transferase activity
GNY17_07330	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GNY17_07335	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GNY17_07340	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNY17_07355	COG0366	Alpha amylase catalytic
GNY17_07360	COG1263	PTS System
GNY17_07360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNY17_07370	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GNY17_07380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GNY17_07385	COG2011	ABC-type metal ion transport system permease component
GNY17_07390	COG1464	Belongs to the NlpA lipoprotein family
GNY17_07395	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
GNY17_07405	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GNY17_07405	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GNY17_07415	COG3706	GGDEF domain
GNY17_07415	COG0745	RESPONSE REGULATOR receiver
GNY17_07420	COG1611	Belongs to the LOG family
GNY17_07425	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNY17_07435	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
GNY17_07440	COG2363	Small membrane protein
GNY17_07450	COG0583	DNA-binding transcription factor activity
GNY17_07455	COG0301	tRNA thio-modification
GNY17_07455	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNY17_07460	COG2885	chlorophyll binding
GNY17_07465	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GNY17_07470	COG1722	exodeoxyribonuclease VII activity
GNY17_07475	COG0142	geranyltranstransferase activity
GNY17_07480	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GNY17_07485	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GNY17_07490	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
GNY17_07495	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GNY17_07515	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GNY17_07515	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GNY17_07520	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GNY17_07525	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GNY17_07530	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GNY17_07545	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
GNY17_07550	COG2252	PERMEase
GNY17_07555	COG2195	Cleaves the N-terminal amino acid of tripeptides
GNY17_07580	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GNY17_07580	COG0047	phosphoribosylformylglycinamidine synthase activity
GNY17_07585	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
GNY17_07595	COG0590	tRNA wobble adenosine to inosine editing
GNY17_07600	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
GNY17_07640	COG0484	heat shock protein binding
GNY17_07645	COG0443	Heat shock 70 kDa protein
GNY17_07655	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GNY17_07660	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GNY17_07670	COG0497	DNA recombination
GNY17_07675	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GNY17_07680	COG2914	Belongs to the UPF0125 (RnfH) family
GNY17_07685	COG2867	negative regulation of translational initiation
GNY17_07690	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
GNY17_07700	COG0582	viral genome integration into host DNA
GNY17_07745	COG3501	Rhs element vgr protein
GNY17_07765	COG0582	viral genome integration into host DNA
GNY17_07790	COG4580	involved in the transport of maltose and maltodextrins
GNY17_07795	COG1874	Beta-galactosidase
GNY17_07805	COG3833	ABC-type maltose transport systems, permease component
GNY17_07810	COG1175	transmembrane transport
GNY17_07815	COG2182	Extracellular solute-binding protein
GNY17_07835	COG3293	Transposase
GNY17_07890	COG2003	Belongs to the UPF0758 family
GNY17_07930	COG0583	DNA-binding transcription factor activity
GNY17_07935	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GNY17_07935	COG3153	acetyltransferase
GNY17_07955	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GNY17_07960	COG2873	o-acetylhomoserine
GNY17_07995	COG1115	amino acid carrier protein
GNY17_08005	COG1584	GPR1 FUN34 yaaH family protein
GNY17_08015	COG1757	Na H antiporter
GNY17_08020	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GNY17_08020	COG0519	Catalyzes the synthesis of GMP from XMP
GNY17_08025	COG0517	IMP dehydrogenase activity
GNY17_08025	COG0516	GMP reductase activity
GNY17_08030	COG1570	exodeoxyribonuclease VII activity
GNY17_08045	COG1160	GTP binding
GNY17_08050	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GNY17_08055	COG2976	Protein conserved in bacteria
GNY17_08060	COG0124	histidyl-tRNA synthetase
GNY17_08065	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GNY17_08080	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GNY17_08085	COG0105	UTP biosynthetic process
GNY17_08090	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GNY17_08095	COG2975	iron-sulfur cluster assembly
GNY17_08100	COG0633	Ferredoxin
GNY17_08105	COG0443	Heat shock 70 kDa protein
GNY17_08110	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GNY17_08120	COG0822	iron-sulfur transferase activity
GNY17_08125	COG1104	cysteine desulfurase activity
GNY17_08140	COG0483	inositol monophosphate 1-phosphatase activity
GNY17_08150	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNY17_08155	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNY17_08160	COG1862	Preprotein translocase
GNY17_08165	COG0343	queuine tRNA-ribosyltransferase activity
GNY17_08170	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GNY17_08180	COG0517	IMP dehydrogenase activity
GNY17_08190	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GNY17_08200	COG0583	DNA-binding transcription factor activity
GNY17_08205	COG0450	alkyl hydroperoxide reductase
GNY17_08210	COG3142	Participates in the control of copper homeostasis
GNY17_08220	COG0704	Plays a role in the regulation of phosphate uptake
GNY17_08225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GNY17_08230	COG0581	inorganic phosphate transmembrane transporter activity
GNY17_08240	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GNY17_08245	COG0248	Ppx GppA phosphatase
GNY17_08255	COG5002	protein histidine kinase activity
GNY17_08260	COG0745	RESPONSE REGULATOR receiver
GNY17_08265	COG2974	May be involved in recombination
GNY17_08275	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GNY17_08335	COG0542	response to heat
GNY17_08345	COG0564	pseudouridine synthase activity
GNY17_08350	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GNY17_08355	COG0741	lytic transglycosylase activity
GNY17_08355	COG1196	nuclear chromosome segregation
GNY17_08355	COG0739	heme binding
GNY17_08360	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GNY17_08365	COG1605	Chorismate mutase
GNY17_08365	COG0077	Prephenate dehydratase
GNY17_08370	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
GNY17_08375	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
GNY17_08385	COG0488	(ABC) transporter
GNY17_08400	COG0739	heme binding
GNY17_08405	COG1605	Chorismate mutase
GNY17_08405	COG0287	Prephenate dehydrogenase
GNY17_08410	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GNY17_08415	COG1472	Belongs to the glycosyl hydrolase 3 family
GNY17_08420	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
GNY17_08425	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GNY17_08440	COG1966	Carbon starvation protein
GNY17_08445	COG3275	phosphorelay sensor kinase activity
GNY17_08450	COG3279	Response regulator of the LytR AlgR family
GNY17_08455	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GNY17_08460	COG1047	Peptidyl-prolyl cis-trans
GNY17_08465	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GNY17_08470	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GNY17_08475	COG0196	riboflavin kinase activity
GNY17_08480	COG0728	peptidoglycan biosynthetic process
GNY17_08485	COG0268	Binds directly to 16S ribosomal RNA
GNY17_08495	COG0640	Transcriptional regulator
GNY17_08505	COG0583	DNA-binding transcription factor activity
GNY17_08510	COG1283	sodium-dependent phosphate transmembrane transporter activity
GNY17_08520	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GNY17_08525	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GNY17_08530	COG0730	response to heat
GNY17_08540	COG0494	nUDIX hydrolase
GNY17_08550	COG3066	DNA modification
GNY17_08560	COG0667	Aldo Keto reductase
GNY17_08575	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
GNY17_08585	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GNY17_08590	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GNY17_08600	COG0716	FMN binding
GNY17_08610	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
GNY17_08615	COG0513	Belongs to the DEAD box helicase family
GNY17_08620	COG3022	response to hydroperoxide
GNY17_08625	COG1115	amino acid carrier protein
GNY17_08640	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GNY17_08650	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GNY17_08655	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
GNY17_08660	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GNY17_08665	COG0083	homoserine kinase activity
GNY17_08680	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GNY17_08695	COG0745	RESPONSE REGULATOR receiver
GNY17_08705	COG5002	protein histidine kinase activity
GNY17_08705	COG2198	Histidine kinase
GNY17_08705	COG0784	Response regulator, receiver
GNY17_08710	COG2203	Gaf domain
GNY17_08710	COG5001	Diguanylate cyclase
GNY17_08710	COG4251	negative regulation of phosphorylation
GNY17_08710	COG3706	GGDEF domain
GNY17_08715	COG1242	4 iron, 4 sulfur cluster binding
GNY17_08720	COG0069	glutamate synthase activity
GNY17_08720	COG0070	glutamate synthase
GNY17_08720	COG0067	glutamate synthase
GNY17_08730	COG0070	glutamate synthase
GNY17_08730	COG0067	glutamate synthase
GNY17_08730	COG0069	glutamate synthase activity
GNY17_08735	COG0493	'glutamate synthase
GNY17_08745	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GNY17_08755	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNY17_08760	COG2860	membrane
GNY17_08765	COG0583	DNA-binding transcription factor activity
GNY17_08770	COG0730	response to heat
GNY17_08785	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GNY17_08790	COG0505	Belongs to the CarA family
GNY17_08795	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
GNY17_08800	COG0494	nUDIX hydrolase
GNY17_08805	COG0653	protein targeting
GNY17_08815	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GNY17_08820	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GNY17_08825	COG0849	cell division
GNY17_08830	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
GNY17_08835	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GNY17_08840	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GNY17_08845	COG0772	Belongs to the SEDS family
GNY17_08850	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GNY17_08855	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GNY17_08860	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GNY17_08865	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GNY17_08870	COG0768	penicillin binding
GNY17_08875	COG3116	cell division
GNY17_08880	COG0275	rRNA processing
GNY17_08895	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GNY17_08905	COG0792	nuclease activity
GNY17_08910	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
GNY17_08915	COG2823	Periplasmic or secreted lipoprotein
GNY17_08920	COG2969	positive regulation of protein catabolic process
GNY17_08925	COG0625	glutathione transferase activity
GNY17_08930	COG2857	Cytochrome c1
GNY17_08935	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GNY17_08940	COG0723	plastoquinol--plastocyanin reductase activity
GNY17_08945	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GNY17_08950	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GNY17_08960	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GNY17_08970	COG3105	Protein conserved in bacteria
GNY17_08980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GNY17_08985	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GNY17_08990	COG0187	DNA topoisomerase II activity
GNY17_08995	COG3150	esterase
GNY17_09005	COG3151	Protein conserved in bacteria
GNY17_09010	COG0494	nUDIX hydrolase
GNY17_09015	COG1538	Outer membrane efflux protein
GNY17_09020	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
GNY17_09020	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
GNY17_09025	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
GNY17_09040	COG3025	triphosphatase activity
GNY17_09045	COG1392	Phosphate transport regulator
GNY17_09050	COG0306	phosphate transporter
GNY17_09055	COG4991	sh3 domain protein
GNY17_09065	COG3267	Type II secretory pathway component ExeA
GNY17_09065	COG3409	Peptidoglycan-binding domain 1 protein
GNY17_09070	COG0617	tRNA 3'-terminal CCA addition
GNY17_09075	COG1968	undecaprenyl-diphosphatase activity
GNY17_09080	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GNY17_09085	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GNY17_09090	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GNY17_09095	COG0596	Alpha beta hydrolase
GNY17_09100	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GNY17_09105	COG0828	Belongs to the bacterial ribosomal protein bS21 family
GNY17_09110	COG1610	YqeY-like protein
GNY17_09115	COG0358	DNA primase activity
GNY17_09120	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GNY17_09235	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
GNY17_09285	COG0732	type I restriction modification DNA specificity domain
GNY17_09335	COG1464	Belongs to the NlpA lipoprotein family
GNY17_09370	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_09370	COG2213	PTS system mannitol-specific
GNY17_09375	COG0246	Mannitol dehydrogenase
GNY17_09380	COG3722	fumarate hydratase activity
GNY17_09385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GNY17_09390	COG5002	protein histidine kinase activity
GNY17_09405	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GNY17_09410	COG1349	DNA-binding transcription factor activity
GNY17_09420	COG0469	pyruvate kinase activity
GNY17_09430	COG3706	GGDEF domain
GNY17_09435	COG0440	acetolactate synthase activity
GNY17_09440	COG0028	Belongs to the TPP enzyme family
GNY17_09445	COG1022	Amp-dependent synthetase and ligase
GNY17_09450	COG0583	DNA-binding transcription factor activity
GNY17_09470	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GNY17_09475	COG0473	3-isopropylmalate dehydrogenase activity
GNY17_09480	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GNY17_09485	COG0066	3-isopropylmalate dehydratase activity
GNY17_09495	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GNY17_09500	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
GNY17_09505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GNY17_09510	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GNY17_09515	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
GNY17_09520	COG2967	ApaG domain
GNY17_09525	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GNY17_09540	COG2966	Psort location CytoplasmicMembrane, score
GNY17_09545	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GNY17_09555	COG0261	This protein binds to 23S rRNA in the presence of protein L20
GNY17_09560	COG0142	geranyltranstransferase activity
GNY17_09570	COG0039	L-malate dehydrogenase activity
GNY17_09605	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
GNY17_09610	COG1178	ABC-type Fe3 transport system permease component
GNY17_09615	COG4143	(ABC) transporter
GNY17_09620	COG0163	prenyltransferase activity
GNY17_09625	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GNY17_09635	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
GNY17_09640	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GNY17_09650	COG2105	PFAM AIG2 family protein
GNY17_09660	COG0729	surface antigen
GNY17_09665	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNY17_09675	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
GNY17_09690	COG4181	ATPase activity
GNY17_09710	COG0529	Catalyzes the synthesis of activated sulfate
GNY17_09715	COG3273	potassium ion transport
GNY17_09715	COG0471	metal ion transport
GNY17_09725	COG2895	sulfate adenylyltransferase (ATP) activity
GNY17_09730	COG0175	sulfate reduction
GNY17_09735	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
GNY17_09735	COG1648	precorrin-2 dehydrogenase activity
GNY17_09740	COG0737	Belongs to the 5'-nucleotidase family
GNY17_09750	COG0513	Belongs to the DEAD box helicase family
GNY17_09755	COG2153	protein acetylation
GNY17_09765	COG0545	Peptidyl-prolyl cis-trans isomerase
GNY17_09775	COG0203	ribosomal protein L17
GNY17_09780	COG0202	RNA polymerase activity
GNY17_09790	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GNY17_09795	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GNY17_09805	COG0201	protein transport
GNY17_09810	COG0200	Binds to the 23S rRNA
GNY17_09815	COG1841	ribosomal large subunit assembly
GNY17_09830	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GNY17_09835	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GNY17_09840	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GNY17_09845	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GNY17_09850	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GNY17_09855	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GNY17_09860	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GNY17_09865	COG0255	Belongs to the universal ribosomal protein uL29 family
GNY17_09875	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GNY17_09880	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GNY17_09885	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GNY17_09890	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GNY17_09900	COG0088	Forms part of the polypeptide exit tunnel
GNY17_09905	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GNY17_09915	COG0254	rRNA binding
GNY17_09925	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GNY17_09930	COG1609	Transcriptional regulator
GNY17_09940	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GNY17_09945	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GNY17_09960	COG2003	Belongs to the UPF0758 family
GNY17_09990	COG1575	Belongs to the MenA family. Type 1 subfamily
GNY17_09995	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GNY17_10000	COG3074	FtsZ-dependent cytokinesis
GNY17_10010	COG1494	fructose-1,6-bisphosphatase
GNY17_10035	COG0149	triose-phosphate isomerase activity
GNY17_10045	COG2801	Transposase and inactivated derivatives
GNY17_10090	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GNY17_10110	COG0438	transferase activity, transferring glycosyl groups
GNY17_10130	COG1215	transferase activity, transferring glycosyl groups
GNY17_10135	COG0110	maltose O-acetyltransferase activity
GNY17_10145	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GNY17_10195	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GNY17_10205	COG1560	Kdo2-lipid A biosynthetic process
GNY17_10210	COG0859	PFAM glycosyl transferase family 9
GNY17_10215	COG1519	Transferase
GNY17_10225	COG0438	transferase activity, transferring glycosyl groups
GNY17_10225	COG0297	glycogen (starch) synthase activity
GNY17_10245	COG2030	dehydratase
GNY17_10250	COG0110	maltose O-acetyltransferase activity
GNY17_10270	COG3642	lipopolysaccharide core region biosynthetic process
GNY17_10275	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GNY17_10280	COG0859	PFAM glycosyl transferase family 9
GNY17_10285	COG0463	Glycosyl transferase, family 2
GNY17_10290	COG0438	transferase activity, transferring glycosyl groups
GNY17_10305	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
GNY17_10320	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GNY17_10325	COG2003	Belongs to the UPF0758 family
GNY17_10340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GNY17_10345	COG1309	transcriptional regulator
GNY17_10350	COG1560	Kdo2-lipid A biosynthetic process
GNY17_10355	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GNY17_10360	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GNY17_10365	COG1561	YicC-like family, N-terminal region
GNY17_10425	COG4608	Belongs to the ABC transporter superfamily
GNY17_10430	COG0444	Belongs to the ABC transporter superfamily
GNY17_10435	COG0747	negative chemotaxis
GNY17_10440	COG4239	(ABC) transporter, permease
GNY17_10445	COG4174	ABC transporter (Permease)
GNY17_10470	COG0811	peptide transport
GNY17_10475	COG0848	biopolymer transport protein
GNY17_10490	COG0194	GDP metabolic process
GNY17_10495	COG1758	RNA polymerase activity
GNY17_10500	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNY17_10505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNY17_10510	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GNY17_10515	COG2233	PERMEase
GNY17_10520	COG2205	protein histidine kinase activity
GNY17_10525	COG0745	RESPONSE REGULATOR receiver
GNY17_10535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GNY17_10545	COG2183	response to ionizing radiation
GNY17_10555	COG0596	Alpha beta hydrolase
GNY17_10560	COG1040	competence protein
GNY17_10565	COG0316	Belongs to the HesB IscA family
GNY17_10565	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
GNY17_10570	COG0494	nUDIX hydrolase
GNY17_10575	COG1218	3'(2'),5'-bisphosphate nucleotidase
GNY17_10585	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
GNY17_10590	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
GNY17_10595	COG3156	type II secretion system protein K
GNY17_10600	COG4795	General secretion pathway protein
GNY17_10605	COG2165	general secretion pathway protein
GNY17_10610	COG2165	general secretion pathway protein
GNY17_10615	COG2165	general secretion pathway protein
GNY17_10620	COG1459	type II secretion system
GNY17_10625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GNY17_10635	COG3031	protein transport across the cell outer membrane
GNY17_10640	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
GNY17_10645	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GNY17_10650	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
GNY17_10660	COG0456	acetyltransferase
GNY17_10665	COG1490	D-aminoacyl-tRNA deacylase activity
GNY17_10670	COG1295	ribonuclease BN
GNY17_10690	COG0174	glutamine synthetase
GNY17_10700	COG3852	Histidine kinase
GNY17_10705	COG2204	response regulator
GNY17_10715	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GNY17_10720	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GNY17_10750	COG0218	Necessary for normal cell division and for the maintenance of normal septation
GNY17_10760	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNY17_10760	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNY17_10785	COG0084	hydrolase, TatD family'
GNY17_10795	COG0805	protein transport
GNY17_10800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GNY17_10805	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GNY17_10810	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GNY17_10815	COG3165	ubiquinone biosynthetic process from chorismate
GNY17_10820	COG2226	methyltransferase
GNY17_10825	COG1322	Protein conserved in bacteria
GNY17_10840	COG0628	permease
GNY17_10890	COG2823	Periplasmic or secreted lipoprotein
GNY17_10900	COG2081	HI0933 family
GNY17_10910	COG1528	Iron-storage protein
GNY17_10915	COG0589	response to stress
GNY17_10920	COG0697	spore germination
GNY17_10930	COG0742	ribosomal rna small subunit methyltransferase
GNY17_10935	COG5001	Diguanylate cyclase
GNY17_10935	COG5002	protein histidine kinase activity
GNY17_10940	COG1522	sequence-specific DNA binding
GNY17_10945	COG0339	signal peptide processing
GNY17_10950	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
GNY17_10955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNY17_10960	COG0583	DNA-binding transcription factor activity
GNY17_10965	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
GNY17_10970	COG0800	Aldolase
GNY17_10975	COG2610	gluconate transmembrane transporter activity
GNY17_10980	COG3265	gluconokinase activity
GNY17_10985	COG0129	dihydroxy-acid dehydratase activity
GNY17_10990	COG2076	Multidrug Resistance protein
GNY17_11000	COG0583	DNA-binding transcription factor activity
GNY17_11005	COG1609	Transcriptional regulator
GNY17_11045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNY17_11055	COG0747	negative chemotaxis
GNY17_11060	COG4172	Belongs to the ABC transporter superfamily
GNY17_11125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_11130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNY17_11140	COG2960	long-chain fatty acid transporting porin activity
GNY17_11145	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GNY17_11150	COG0583	DNA-binding transcription factor activity
GNY17_11195	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNY17_11200	COG1739	Uncharacterized protein family UPF0029
GNY17_11205	COG1024	Enoyl-CoA hydratase
GNY17_11205	COG1250	3-hydroxyacyl-CoA dehydrogenase
GNY17_11210	COG0183	Belongs to the thiolase family
GNY17_11215	COG0604	alcohol dehydrogenase
GNY17_11230	COG0425	Belongs to the sulfur carrier protein TusA family
GNY17_11240	COG2119	membrane
GNY17_11245	COG0752	glycyl-tRNA synthetase alpha subunit
GNY17_11250	COG0751	glycine-tRNA ligase activity
GNY17_11255	COG0366	Alpha amylase catalytic
GNY17_11260	COG3977	Valine--pyruvate aminotransferase
GNY17_11265	COG0071	Belongs to the small heat shock protein (HSP20) family
GNY17_11285	COG0187	DNA topoisomerase II activity
GNY17_11290	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GNY17_11295	COG0592	DNA-directed DNA polymerase activity
GNY17_11300	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GNY17_11325	COG1126	abc transporter atp-binding protein
GNY17_11335	COG0594	ribonuclease P activity
GNY17_11340	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
GNY17_11345	COG0706	membrane insertase activity
GNY17_11350	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GNY17_11355	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GNY17_11360	COG0445	tRNA wobble uridine modification
GNY17_11365	COG0357	Ribosomal RNA small subunit methyltransferase G
GNY17_11370	COG1192	Involved in chromosome partitioning
GNY17_11375	COG1475	DNA binding
GNY17_11380	COG3312	ion transport
GNY17_11385	COG0356	it plays a direct role in the translocation of protons across the membrane
GNY17_11400	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GNY17_11405	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GNY17_11410	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GNY17_11415	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GNY17_11420	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GNY17_11425	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GNY17_11430	COG0765	amino acid transport
GNY17_11435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_11440	COG2814	Major facilitator Superfamily
GNY17_11445	COG0583	DNA-binding transcription factor activity
GNY17_11455	COG0129	dihydroxy-acid dehydratase activity
GNY17_11460	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GNY17_11465	COG3978	acetolactate synthase activity
GNY17_11475	COG0606	chelatase, subunit chli
GNY17_11485	COG0204	Acyl-transferase
GNY17_11490	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GNY17_11495	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GNY17_11505	COG3084	Protein conserved in bacteria
GNY17_11515	COG4326	sporulation control protein
GNY17_11520	COG1272	protein, Hemolysin III
GNY17_11530	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNY17_11535	COG0569	domain protein
GNY17_11540	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GNY17_11540	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GNY17_11545	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GNY17_11550	COG0242	peptide deformylase activity
GNY17_11560	COG0758	DNA mediated transformation
GNY17_11565	COG2922	Belongs to the Smg family
GNY17_11570	COG0551	DNA topoisomerase type I activity
GNY17_11575	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GNY17_11580	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GNY17_11585	COG0009	L-threonylcarbamoyladenylate synthase
GNY17_11590	COG0408	coproporphyrinogen oxidase activity
GNY17_11595	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GNY17_11605	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GNY17_11650	COG0582	viral genome integration into host DNA
GNY17_11705	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
GNY17_11760	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
GNY17_11820	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GNY17_11825	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GNY17_11830	COG0352	thiamine-phosphate diphosphorylase activity
GNY17_11835	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNY17_11840	COG2104	thiamine diphosphate biosynthetic process
GNY17_11845	COG2022	thiamine diphosphate biosynthetic process
GNY17_11855	COG0006	proline dipeptidase activity
GNY17_11885	COG3220	belongs to the UPF0276 family
GNY17_11895	COG0210	DNA helicase
GNY17_11905	COG0405	Gamma-glutamyltransferase
GNY17_11910	COG1280	lysine exporter protein (LysE YggA)
GNY17_11920	COG2962	Rard protein
GNY17_11925	COG0514	ATP-dependent DNA helicase (RecQ)
GNY17_11940	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
GNY17_11945	COG0248	Ppx GppA phosphatase
GNY17_11950	COG0513	Belongs to the DEAD box helicase family
GNY17_11955	COG3118	belongs to the thioredoxin family
GNY17_11960	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GNY17_11975	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GNY17_11980	COG0633	Ferredoxin
GNY17_12030	COG3071	HemY protein
GNY17_12035	COG2959	enzyme of heme biosynthesis
GNY17_12040	COG1587	Uroporphyrinogen-III synthase
GNY17_12045	COG0181	hydroxymethylbilane synthase activity
GNY17_12050	COG3072	Adenylate cyclase
GNY17_12055	COG1965	Belongs to the frataxin family
GNY17_12065	COG0019	diaminopimelate decarboxylase activity
GNY17_12070	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GNY17_12080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
GNY17_12085	COG1011	Hydrolase
GNY17_12090	COG2200	EAL domain
GNY17_12090	COG2199	diguanylate cyclase activity
GNY17_12090	COG3287	FIST C domain
GNY17_12110	COG0561	phosphatase activity
GNY17_12115	COG2267	carboxylic ester hydrolase activity
GNY17_12120	COG1280	lysine exporter protein (LysE YggA)
GNY17_12125	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
GNY17_12130	COG0640	Transcriptional regulator
GNY17_12135	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GNY17_12190	COG2095	MarC family integral membrane protein
GNY17_12200	COG0742	ribosomal rna small subunit methyltransferase
GNY17_12205	COG0552	protein localization to endoplasmic reticulum
GNY17_12210	COG2884	Cell division ATP-binding protein ftsE
GNY17_12215	COG2177	Part of the ABC transporter FtsEX involved in
GNY17_12225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNY17_12230	COG0705	Rhomboid family
GNY17_12235	COG1580	Controls the rotational direction of flagella during chemotaxis
GNY17_12240	COG3161	chorismate lyase activity
GNY17_12245	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
GNY17_12250	COG2937	Belongs to the GPAT DAPAT family
GNY17_12260	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GNY17_12265	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
GNY17_12270	COG0534	Mate efflux family protein
GNY17_12275	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNY17_12290	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GNY17_12295	COG4206	TonB-dependent receptor
GNY17_12305	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GNY17_12360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNY17_12370	COG0812	UDP-N-acetylmuramate dehydrogenase activity
GNY17_12405	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GNY17_12415	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GNY17_12420	COG0250	Participates in transcription elongation, termination and antitermination
GNY17_12425	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GNY17_12430	COG0081	regulation of translation
GNY17_12435	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GNY17_12440	COG0222	ribosome binding
GNY17_12445	COG0085	RNA polymerase activity
GNY17_12450	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GNY17_12455	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
GNY17_12460	COG2816	NAD+ diphosphatase activity
GNY17_12475	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GNY17_12480	COG1573	uracil-dna glycosylase
GNY17_12485	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GNY17_12490	COG3068	Protein conserved in bacteria
GNY17_12495	COG1253	flavin adenine dinucleotide binding
GNY17_12510	COG0151	Belongs to the GarS family
GNY17_12520	COG0138	bifunctional purine biosynthesis protein purh
GNY17_12530	COG0789	Transcriptional regulator
GNY17_12535	COG3710	Transcriptional regulator
GNY17_12545	COG0531	amino acid
GNY17_12550	COG1982	Orn Lys Arg decarboxylase major
GNY17_12615	COG3706	GGDEF domain
GNY17_12620	COG0488	(ABC) transporter
GNY17_12625	COG2814	Major facilitator Superfamily
GNY17_12630	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
GNY17_12635	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNY17_12640	COG2264	protein methyltransferase activity
GNY17_12650	COG0439	Biotin carboxylase
GNY17_12655	COG0511	ligase activity, forming carbon-carbon bonds
GNY17_12660	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GNY17_12665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GNY17_12680	COG2814	Major facilitator Superfamily
GNY17_12685	COG0784	Response regulator, receiver
GNY17_12685	COG2205	protein histidine kinase activity
GNY17_12710	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNY17_12720	COG3263	regulation of cellular component size
GNY17_12730	COG4232	protein-disulfide reductase activity
GNY17_12735	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GNY17_12740	COG1027	Aspartate ammonia-lyase
GNY17_12745	COG3030	protein affecting phage T7 exclusion by the F plasmid
GNY17_12750	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GNY17_12760	COG2205	protein histidine kinase activity
GNY17_12765	COG0745	RESPONSE REGULATOR receiver
GNY17_12770	COG3678	ATP-independent chaperone mediated protein folding
GNY17_12780	COG0205	6-phosphofructokinase activity
GNY17_12785	COG0534	Mate efflux family protein
GNY17_12790	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GNY17_12795	COG0459	protein refolding
GNY17_12810	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNY17_12820	COG1509	lysine 2,3-aminomutase activity
GNY17_12825	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GNY17_12835	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
GNY17_12840	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
GNY17_12845	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GNY17_12850	COG1053	succinate dehydrogenase
GNY17_12860	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
GNY17_12880	COG4942	peptidase
GNY17_12885	COG1045	serine acetyltransferase
GNY17_12890	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GNY17_12895	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
GNY17_12900	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNY17_12905	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GNY17_12955	COG0471	metal ion transport
GNY17_12960	COG0688	phosphatidylethanolamine metabolic process
GNY17_12965	COG1162	GTPase activity
GNY17_12970	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
GNY17_13040	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GNY17_13045	COG0802	atpase or kinase
GNY17_13050	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNY17_13055	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GNY17_13060	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GNY17_13070	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GNY17_13075	COG0330	HflC and HflK could
GNY17_13080	COG0330	HflC and HflK could
GNY17_13085	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
GNY17_13090	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GNY17_13100	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
GNY17_13105	COG1017	nitric oxide dioxygenase activity
GNY17_13105	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GNY17_13110	COG1959	2 iron, 2 sulfur cluster binding
GNY17_13115	COG0557	exoribonuclease II activity
GNY17_13120	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNY17_13125	COG0546	phosphoglycolate phosphatase activity
GNY17_13130	COG0180	Tryptophanyl-tRNA synthetase
GNY17_13160	COG0512	Glutamine amidotransferase of anthranilate synthase
GNY17_13165	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GNY17_13175	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_13185	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNY17_13190	COG3954	Phosphoribulokinase
GNY17_13195	COG3089	Belongs to the UPF0270 family
GNY17_13200	COG0429	hydrolase of the alpha beta-hydrolase fold
GNY17_13210	COG0488	(ABC) transporter
GNY17_13220	COG2249	NAD(P)H dehydrogenase (quinone) activity
GNY17_13235	COG1047	Peptidyl-prolyl cis-trans
GNY17_13245	COG1446	asparaginase
GNY17_13250	COG2900	Belongs to the SlyX family
GNY17_13260	COG0545	Peptidyl-prolyl cis-trans isomerase
GNY17_13265	COG2964	Protein conserved in bacteria
GNY17_13270	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
GNY17_13275	COG2923	Belongs to the DsrF TusC family
GNY17_13280	COG2168	tRNA wobble position uridine thiolation
GNY17_13290	COG0049	tRNA binding
GNY17_13295	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GNY17_13300	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GNY17_13305	COG2906	2 iron, 2 sulfur cluster binding
GNY17_13315	COG0281	malic enzyme
GNY17_13325	COG0626	cystathionine gamma-synthase activity
GNY17_13330	COG0527	aspartate kinase activity
GNY17_13330	COG0460	homoserine dehydrogenase
GNY17_13335	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
GNY17_13345	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GNY17_13350	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNY17_13355	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GNY17_13360	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GNY17_13365	COG0137	argininosuccinate synthase activity
GNY17_13370	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GNY17_13370	COG0165	Argininosuccinate lyase
GNY17_13385	COG0678	peroxiredoxin activity
GNY17_13385	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GNY17_13395	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
GNY17_13425	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GNY17_13430	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GNY17_13440	COG0338	D12 class N6 adenine-specific DNA methyltransferase
GNY17_13445	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GNY17_13450	COG0360	Binds together with S18 to 16S ribosomal RNA
GNY17_13455	COG2965	DNA replication, synthesis of RNA primer
GNY17_13465	COG0359	binds to the 23S rRNA
GNY17_13475	COG0305	Participates in initiation and elongation during chromosome replication
GNY17_13480	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNY17_13490	COG0432	Pfam Uncharacterised protein family UPF0047
GNY17_13495	COG0166	Belongs to the GPI family
GNY17_13505	COG0735	belongs to the Fur family
GNY17_13515	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNY17_13540	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GNY17_13545	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GNY17_13550	COG0175	sulfate reduction
GNY17_13605	COG3335	DDE superfamily endonuclease
GNY17_13620	COG1410	methionine synthase
GNY17_13620	COG0646	methionine synthase
GNY17_13625	COG0527	aspartate kinase activity
GNY17_13630	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
GNY17_13640	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GNY17_13655	COG0629	single-stranded DNA binding
GNY17_13660	COG2200	EAL domain
GNY17_13660	COG2199	diguanylate cyclase activity
GNY17_13685	COG3409	Peptidoglycan-binding domain 1 protein
GNY17_13685	COG3267	Type II secretory pathway component ExeA
GNY17_13695	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GNY17_13700	COG1459	type II secretion system
GNY17_13745	COG1077	Cell shape determining protein MreB Mrl
GNY17_13750	COG1792	Involved in formation and maintenance of cell shape
GNY17_13755	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
GNY17_13760	COG0424	maF-like protein
GNY17_13765	COG1530	ribonuclease E activity
GNY17_13770	COG3164	Protein of unknown function
GNY17_13775	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GNY17_13780	COG0312	modulator of DNA gyrase
GNY17_13785	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
GNY17_13790	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GNY17_13805	COG0564	pseudouridine synthase activity
GNY17_13810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GNY17_13815	COG3028	Belongs to the UPF0307 family
GNY17_13820	COG0312	modulator of DNA gyrase
GNY17_13825	COG2239	Acts as a magnesium transporter
GNY17_13830	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_13835	COG1660	Displays ATPase and GTPase activities
GNY17_13840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_13845	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GNY17_13855	COG1137	ATPase activity
GNY17_13860	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
GNY17_13870	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
GNY17_13870	COG0517	IMP dehydrogenase activity
GNY17_13880	COG1127	ABC transporter
GNY17_13885	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GNY17_13890	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GNY17_13895	COG2854	intermembrane phospholipid transfer
GNY17_13905	COG5007	Belongs to the BolA IbaG family
GNY17_13910	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GNY17_13915	COG0204	Acyl-transferase
GNY17_13920	COG0251	oxidation-reduction process
GNY17_13925	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
GNY17_13930	COG0540	Belongs to the ATCase OTCase family
GNY17_13940	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GNY17_13945	COG2235	arginine
GNY17_13975	COG0525	valine-tRNA ligase activity
GNY17_13980	COG2927	DNA polymerase III (CHI subunit)
GNY17_13985	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GNY17_13990	COG0795	lipopolysaccharide-transporting ATPase activity
GNY17_13995	COG0795	lipopolysaccharide-transporting ATPase activity
GNY17_14005	COG4325	translation initiation factor activity
GNY17_14010	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_14135	COG0582	viral genome integration into host DNA
GNY17_14175	COG0726	polysaccharide deacetylase
GNY17_14180	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GNY17_14185	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GNY17_14190	COG1447	Phosphotransferase system cellobiose-specific component IIA
GNY17_14195	COG1486	melibiose metabolic process
GNY17_14200	COG3394	polysaccharide catabolic process
GNY17_14210	COG3437	response regulator, receiver
GNY17_14260	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_14290	COG0840	transmembrane signaling receptor activity
GNY17_14330	COG0741	lytic transglycosylase activity
GNY17_14335	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
GNY17_14345	COG0220	tRNA (guanine-N7-)-methyltransferase activity
GNY17_14355	COG2066	Belongs to the glutaminase family
GNY17_14360	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GNY17_14365	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GNY17_14375	COG1872	DUF167
GNY17_14380	COG0762	integral membrane protein
GNY17_14385	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNY17_14390	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GNY17_14405	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GNY17_14410	COG1678	Uncharacterized ACR, COG1678
GNY17_14415	COG0189	ligase activity
GNY17_14420	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GNY17_14425	COG2356	endonuclease I
GNY17_14430	COG3091	SprT-like family
GNY17_14440	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GNY17_14450	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GNY17_14455	COG0583	DNA-binding transcription factor activity
GNY17_14460	COG4771	TonB-dependent receptor
GNY17_14465	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GNY17_14470	COG0126	phosphoglycerate kinase activity
GNY17_14475	COG0191	fructose-bisphosphate aldolase activity
GNY17_14480	COG0668	transmembrane transport
GNY17_14485	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GNY17_14490	COG1279	arginine transmembrane transporter activity
GNY17_14495	COG0583	DNA-binding transcription factor activity
GNY17_14505	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GNY17_14510	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GNY17_14515	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GNY17_14525	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GNY17_14535	COG3079	Belongs to the UPF0149 family
GNY17_14540	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GNY17_14545	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GNY17_14560	COG0354	folic acid binding
GNY17_14565	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
GNY17_14575	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GNY17_14585	COG1595	DNA-templated transcription, initiation
GNY17_14590	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
GNY17_14600	COG3086	response to oxidative stress
GNY17_14605	COG0481	GTPase activity
GNY17_14610	COG0681	Belongs to the peptidase S26 family
GNY17_14615	COG0571	ribonuclease III activity
GNY17_14620	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GNY17_14625	COG1381	Involved in DNA repair and RecF pathway recombination
GNY17_14630	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
GNY17_14635	COG0736	holo-[acyl-carrier-protein] synthase activity
GNY17_14645	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GNY17_14655	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNY17_14660	COG3956	TIGRFAM MazG family protein
GNY17_14665	COG0504	CTP synthase activity
GNY17_14670	COG0148	phosphopyruvate hydratase activity
GNY17_14675	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GNY17_14680	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GNY17_14685	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GNY17_14690	COG0585	pseudouridine synthase activity
GNY17_14695	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GNY17_14700	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GNY17_14715	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GNY17_14720	COG1546	Belongs to the CinA family
GNY17_14725	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GNY17_14730	COG2137	regulation of response to DNA damage stimulus
GNY17_14735	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GNY17_14740	COG0527	aspartate kinase activity
GNY17_14800	COG3630	sodium ion export across plasma membrane
GNY17_14805	COG0511	ligase activity, forming carbon-carbon bonds
GNY17_14805	COG5016	pyruvate
GNY17_14810	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
GNY17_14815	COG1063	alcohol dehydrogenase
GNY17_14820	COG1238	metal cluster binding
GNY17_14825	COG0612	Peptidase, M16
GNY17_14830	COG2918	glutathione biosynthetic process
GNY17_14840	COG1854	S-ribosylhomocysteine lyase activity
GNY17_14845	COG4536	flavin adenine dinucleotide binding
GNY17_14850	COG4137	Cytochrome C assembly protein
GNY17_14855	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GNY17_14860	COG0228	four-way junction DNA binding
GNY17_14865	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GNY17_14870	COG0336	Belongs to the RNA methyltransferase TrmD family
GNY17_14875	COG0335	large ribosomal subunit rRNA binding
GNY17_14880	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
GNY17_14885	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
GNY17_14890	COG0237	dephospho-CoA kinase activity
GNY17_14900	COG1459	type II secretion system
GNY17_14905	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GNY17_14915	COG0157	Belongs to the NadC ModD family
GNY17_14925	COG2186	Transcriptional regulator
GNY17_14930	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
GNY17_14935	COG0508	dehydrogenase complex catalyzes the overall conversion of
GNY17_14940	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNY17_14955	COG0288	reversible hydration of carbon dioxide
GNY17_14960	COG0659	secondary active sulfate transmembrane transporter activity
GNY17_14970	COG1131	(ABC) transporter
GNY17_14975	COG0842	Transport permease protein
GNY17_14980	COG1560	Kdo2-lipid A biosynthetic process
GNY17_14990	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
GNY17_14995	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
GNY17_15000	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GNY17_15015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GNY17_15025	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GNY17_15030	COG1489	DNA binding
GNY17_15035	COG1643	Atp-dependent helicase
GNY17_15040	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNY17_15045	COG1752	Esterase of the alpha-beta hydrolase superfamily
GNY17_15050	COG1049	propionate catabolic process, 2-methylcitrate cycle
GNY17_15055	COG3112	Uncharacterised protein family (UPF0231)
GNY17_15065	COG0004	ammonium transporteR
GNY17_15070	COG1840	ABC-type Fe3 transport system, periplasmic component
GNY17_15080	COG3842	ATPase activity
GNY17_15085	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GNY17_15100	COG2971	BadF BadG BcrA BcrD
GNY17_15110	COG4608	Belongs to the ABC transporter superfamily
GNY17_15115	COG0444	Belongs to the ABC transporter superfamily
GNY17_15120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNY17_15130	COG0747	negative chemotaxis
GNY17_15135	COG2205	protein histidine kinase activity
GNY17_15135	COG2198	Histidine kinase
GNY17_15135	COG0784	Response regulator, receiver
GNY17_15135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_15140	COG2813	Specifically methylates the guanine in position
GNY17_15145	COG0628	permease
GNY17_15150	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
GNY17_15155	COG0316	Belongs to the HesB IscA family
GNY17_15170	COG0739	heme binding
GNY17_15175	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GNY17_15185	COG2027	D-alanyl-D-alanine carboxypeptidase
GNY17_15190	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GNY17_15195	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GNY17_15200	COG1534	Rna-binding protein
GNY17_15205	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
GNY17_15210	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GNY17_15215	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GNY17_15220	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GNY17_15230	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GNY17_15245	COG0779	Required for maturation of 30S ribosomal subunits
GNY17_15250	COG0195	Participates in both transcription termination and antitermination
GNY17_15255	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GNY17_15260	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GNY17_15265	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GNY17_15270	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GNY17_15275	COG1185	polyribonucleotide nucleotidyltransferase activity
GNY17_15290	COG0534	Mate efflux family protein
GNY17_15315	COG3153	acetyltransferase
GNY17_15335	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GNY17_15345	COG0084	hydrolase, TatD family'
GNY17_15350	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNY17_15355	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GNY17_15360	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
GNY17_15365	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
GNY17_15370	COG0813	purine-nucleoside phosphorylase activity
GNY17_15380	COG0560	Phosphoserine phosphatase
GNY17_15390	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GNY17_15395	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GNY17_15400	COG0583	DNA-binding transcription factor activity
GNY17_15410	COG1022	Amp-dependent synthetase and ligase
GNY17_15415	COG2169	Transcriptional regulator
GNY17_15440	COG4964	Belongs to the GSP D family
GNY17_15500	COG0583	DNA-binding transcription factor activity
GNY17_15505	COG0531	amino acid
GNY17_15510	COG2731	YhcH YjgK YiaL family protein
GNY17_15515	COG3250	beta-galactosidase activity
GNY17_15520	COG1609	Transcriptional regulator
GNY17_15530	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GNY17_15540	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GNY17_15545	COG2017	converts alpha-aldose to the beta-anomer
GNY17_15560	COG2211	Major facilitator Superfamily
GNY17_15565	COG1609	Transcriptional regulator
GNY17_15570	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNY17_15585	COG0598	Magnesium transport protein CorA
GNY17_15590	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GNY17_15595	COG1349	DNA-binding transcription factor activity
GNY17_15600	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GNY17_15605	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GNY17_15620	COG2271	Major facilitator Superfamily
GNY17_15625	COG0584	glycerophosphoryl diester phosphodiesterase
GNY17_15630	COG2171	N-acyltransferase activity
GNY17_15635	COG3141	response to X-ray
GNY17_15655	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
GNY17_15660	COG1074	ATP-dependent DNA helicase activity
GNY17_15665	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GNY17_15675	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GNY17_15675	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GNY17_15685	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
GNY17_15690	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GNY17_15695	COG2166	iron-sulfur cluster assembly
GNY17_15700	COG3706	GGDEF domain
GNY17_15705	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GNY17_15710	COG0693	protein deglycase activity
GNY17_15715	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GNY17_15745	COG1595	DNA-templated transcription, initiation
GNY17_15765	COG3056	Lipoprotein
GNY17_15770	COG2813	Specifically methylates the guanine in position
GNY17_15775	COG0271	Belongs to the BolA IbaG family
GNY17_15780	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GNY17_15785	COG1805	sodium ion transport
GNY17_15790	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GNY17_15795	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GNY17_15800	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
GNY17_15805	COG2871	sodium ion transport
GNY17_15810	COG1477	protein flavinylation
GNY17_15825	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GNY17_15830	COG0514	ATP-dependent DNA helicase (RecQ)
GNY17_15835	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GNY17_15850	COG0733	neurotransmitter:sodium symporter activity
GNY17_15870	COG0442	prolyl-tRNA aminoacylation
GNY17_15875	COG1720	tRNA m6t6A37 methyltransferase activity
GNY17_15880	COG0254	rRNA binding
GNY17_15895	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
GNY17_15900	COG1671	Belongs to the UPF0178 family
GNY17_15925	COG3098	single-species biofilm formation
GNY17_15930	COG0564	pseudouridine synthase activity
GNY17_15940	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
GNY17_15945	COG0024	Methionine aminopeptidase
GNY17_15950	COG0052	Belongs to the universal ribosomal protein uS2 family
GNY17_15955	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GNY17_15960	COG0528	UMP kinase activity
GNY17_15965	COG0233	cytoplasmic translational termination
GNY17_15970	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GNY17_15975	COG0575	Belongs to the CDS family
GNY17_15980	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GNY17_15985	COG0750	zinc metalloprotease
GNY17_15995	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
GNY17_16000	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GNY17_16005	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GNY17_16010	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GNY17_16015	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GNY17_16020	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GNY17_16025	COG0587	DNA-directed DNA polymerase activity
GNY17_16030	COG0825	malonyl-CoA metabolic process
GNY17_16035	COG0037	tRNA processing
GNY17_16045	COG0347	Belongs to the P(II) protein family
GNY17_16050	COG3021	interspecies interaction between organisms
GNY17_16060	COG1388	LysM domain
GNY17_16060	COG0741	lytic transglycosylase activity
GNY17_16065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNY17_16070	COG2226	methyltransferase
GNY17_16075	COG0328	RNA-DNA hybrid ribonuclease activity
GNY17_16080	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GNY17_16095	COG1960	acyl-CoA dehydrogenase activity
GNY17_16100	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
GNY17_16105	COG0121	glutamine amidotransferase
GNY17_16110	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GNY17_16115	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
GNY17_16120	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GNY17_16125	COG2233	PERMEase
GNY17_16145	COG1393	Belongs to the ArsC family
GNY17_16150	COG4783	chaperone-mediated protein folding
GNY17_16165	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GNY17_16215	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GNY17_16245	COG2716	regulation of RNA biosynthetic process
GNY17_16250	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GNY17_16270	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNY17_16275	COG1393	Belongs to the ArsC family
GNY17_16305	COG2837	iron assimilation
GNY17_16310	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_16320	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_16325	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_16330	COG1334	flagellar protein FlaG
GNY17_16335	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GNY17_16345	COG1516	flagellar protein fliS
GNY17_16355	COG4191	Histidine kinase
GNY17_16360	COG2204	response regulator
GNY17_16365	COG1677	Flagellar hook-basal body complex protein FliE
GNY17_16375	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNY17_16425	COG1987	bacterial-type flagellum assembly
GNY17_16430	COG1684	flagellar biosynthetic protein fliR
GNY17_16450	COG0455	bacterial-type flagellum organization
GNY17_16465	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
GNY17_16470	COG2198	Histidine kinase
GNY17_16470	COG0643	Histidine kinase
GNY17_16475	COG2201	protein-glutamate methylesterase activity
GNY17_16480	COG1192	Involved in chromosome partitioning
GNY17_16490	COG0835	chemotaxis
GNY17_16500	COG4133	protoheme IX ABC transporter activity
GNY17_16505	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GNY17_16510	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GNY17_16515	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GNY17_16520	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
GNY17_16525	COG1138	Cytochrome C-type biogenesis protein
GNY17_16530	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNY17_16545	COG2853	Lipoprotein
GNY17_16550	COG2067	long-chain fatty acid transport protein
GNY17_16555	COG2067	long-chain fatty acid transport protein
GNY17_16570	COG0183	Belongs to the thiolase family
GNY17_16575	COG1250	3-hydroxyacyl-CoA dehydrogenase
GNY17_16575	COG1024	Enoyl-CoA hydratase
GNY17_16590	COG2062	phosphohistidine phosphatase, SixA
GNY17_16595	COG2840	Smr protein MutS2
GNY17_16600	COG2890	protein-(glutamine-N5) methyltransferase activity
GNY17_16605	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GNY17_16610	COG2860	membrane
GNY17_16620	COG3101	peptidyl-lysine hydroxylation
GNY17_16635	COG0431	NADPH-dependent FMN reductase
GNY17_16640	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GNY17_16640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNY17_16645	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GNY17_16650	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GNY17_16655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GNY17_16665	COG0101	tRNA pseudouridine synthase activity
GNY17_16670	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GNY17_16675	COG0285	dihydrofolate synthase activity
GNY17_16680	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
GNY17_16685	COG1286	toxin biosynthetic process
GNY17_16690	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GNY17_16695	COG0583	DNA-binding transcription factor activity
GNY17_16700	COG0745	RESPONSE REGULATOR receiver
GNY17_16710	COG2832	Protein of unknown function (DUF454)
GNY17_16715	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GNY17_16725	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GNY17_16730	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GNY17_16735	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GNY17_16740	COG0814	amino acid
GNY17_16745	COG0251	oxidation-reduction process
GNY17_16750	COG3681	Belongs to the UPF0597 family
GNY17_16765	COG2261	transglycosylase associated protein
GNY17_16770	COG2983	Belongs to the UPF0260 family
GNY17_16775	COG0668	transmembrane transport
GNY17_16780	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GNY17_16785	COG0346	lactoylglutathione lyase activity
GNY17_16795	COG1785	Belongs to the alkaline phosphatase family
GNY17_16815	COG2226	methyltransferase
GNY17_16830	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GNY17_16835	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNY17_16845	COG3139	Protein of unknown function (DUF1315)
GNY17_16850	COG0252	asparaginase activity
GNY17_16855	COG0616	signal peptide processing
GNY17_16860	COG0446	pyridine nucleotide-disulphide oxidoreductase
GNY17_16860	COG1902	pentaerythritol trinitrate reductase activity
GNY17_16865	COG0778	Nitroreductase
GNY17_16870	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GNY17_16890	COG0123	including yeast histone deacetylase and acetoin utilization protein
GNY17_16900	COG3083	sulfuric ester hydrolase activity
GNY17_16905	COG3082	Protein of unknown function (DUF1414)
GNY17_16910	COG3081	Nucleoid-associated protein
GNY17_16925	COG1757	Na H antiporter
GNY17_16930	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GNY17_16935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNY17_16940	COG2095	MarC family integral membrane protein
GNY17_16945	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_16945	COG1454	alcohol dehydrogenase
GNY17_16965	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GNY17_16975	COG2056	Na+-H+ antiporter family
GNY17_16980	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GNY17_16995	COG2885	chlorophyll binding
GNY17_17005	COG0346	lactoylglutathione lyase activity
GNY17_17010	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GNY17_17015	COG4660	Part of a membrane complex involved in electron transport
GNY17_17020	COG4659	FMN binding
GNY17_17025	COG4658	electron transport chain
GNY17_17030	COG4656	Part of a membrane complex involved in electron transport
GNY17_17035	COG2878	Part of a membrane complex involved in electron transport
GNY17_17040	COG4657	Part of a membrane complex involved in electron transport
GNY17_17055	COG0556	nucleotide-excision repair
GNY17_17060	COG2204	response regulator
GNY17_17065	COG2198	Histidine kinase
GNY17_17070	COG0391	Required for morphogenesis under gluconeogenic growth conditions
GNY17_17075	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GNY17_17080	COG0521	Mo-molybdopterin cofactor biosynthetic process
GNY17_17085	COG0315	cyclic pyranopterin monophosphate synthase activity
GNY17_17090	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GNY17_17095	COG0314	molybdopterin synthase activity
GNY17_17105	COG0601	transmembrane transport
GNY17_17110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNY17_17115	COG0444	Belongs to the ABC transporter superfamily
GNY17_17125	COG0435	Glutathione S-transferase
GNY17_17135	COG3174	membrane
GNY17_17140	COG0857	belongs to the CobB CobQ family
GNY17_17140	COG0280	phosphate acetyltransferase
GNY17_17145	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GNY17_17150	COG3092	negative regulation of chromosome organization
GNY17_17160	COG4120	Belongs to the binding-protein-dependent transport system permease family
GNY17_17165	COG1122	ATPase activity
GNY17_17170	COG0366	Alpha amylase catalytic
GNY17_17175	COG0745	RESPONSE REGULATOR receiver
GNY17_17175	COG3706	GGDEF domain
GNY17_17180	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNY17_17185	COG3012	SEC-C Motif Domain Protein
GNY17_17185	COG3318	Belongs to the UPF0149 family
GNY17_17190	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
GNY17_17195	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GNY17_17200	COG2186	Transcriptional regulator
GNY17_17210	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNY17_17210	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNY17_17215	COG0489	protein tyrosine kinase activity
GNY17_17220	COG0572	uridine kinase
GNY17_17230	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
GNY17_17235	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GNY17_17240	COG0659	secondary active sulfate transmembrane transporter activity
GNY17_17245	COG1530	ribonuclease E activity
GNY17_17250	COG0564	pseudouridine synthase activity
GNY17_17255	COG0424	maF-like protein
GNY17_17260	COG1399	metal-binding, possibly nucleic acid-binding protein
GNY17_17270	COG0416	fatty acid biosynthetic process
GNY17_17275	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GNY17_17305	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GNY17_17310	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GNY17_17320	COG0084	hydrolase, TatD family'
GNY17_17325	COG1263	PTS System
GNY17_17325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNY17_17345	COG0733	neurotransmitter:sodium symporter activity
GNY17_17360	COG4667	esterase of the alpha-beta hydrolase superfamily
GNY17_17365	COG0469	pyruvate kinase activity
GNY17_17370	COG1940	carbohydrate kinase activity
GNY17_17375	COG0784	Response regulator, receiver
GNY17_17375	COG0835	chemotaxis
GNY17_17380	COG0587	DNA-directed DNA polymerase activity
GNY17_17395	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_17400	COG0616	signal peptide processing
GNY17_17405	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
GNY17_17410	COG0539	negative regulation of cytoplasmic translation
GNY17_17420	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
GNY17_17425	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
GNY17_17430	COG0284	orotidine-5'-phosphate decarboxylase activity
GNY17_17435	COG4166	transmembrane transport
GNY17_17460	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GNY17_17470	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GNY17_17470	COG3008	intermembrane lipid transfer
GNY17_17475	COG2995	paraquat-inducible protein a
GNY17_17480	COG3258	Cytochrome c
GNY17_17485	COG2863	cytochrome
GNY17_17525	COG4232	protein-disulfide reductase activity
GNY17_17530	COG3118	belongs to the thioredoxin family
GNY17_17560	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_17570	COG0577	efflux transmembrane transporter activity
GNY17_17570	COG1136	(ABC) transporter
GNY17_17580	COG1136	(ABC) transporter
GNY17_17580	COG0577	efflux transmembrane transporter activity
GNY17_17585	COG1335	isochorismatase
GNY17_17600	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GNY17_17635	COG3850	Histidine kinase
GNY17_17635	COG5002	protein histidine kinase activity
GNY17_17640	COG0745	RESPONSE REGULATOR receiver
GNY17_17650	COG0840	transmembrane signaling receptor activity
GNY17_17655	COG1032	radical SAM domain protein
GNY17_17660	COG4251	negative regulation of phosphorylation
GNY17_17660	COG5001	Diguanylate cyclase
GNY17_17660	COG3706	GGDEF domain
GNY17_17660	COG2203	Gaf domain
GNY17_17675	COG0583	DNA-binding transcription factor activity
GNY17_17685	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GNY17_17695	COG2350	Protein conserved in bacteria
GNY17_17700	COG1607	acyl-coa hydrolase
GNY17_17705	COG2917	probably involved in intracellular septation
GNY17_17725	COG1301	dicarboxylic acid transport
GNY17_17735	COG0318	PFAM AMP-dependent synthetase and ligase
GNY17_17740	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNY17_17750	COG0159	tryptophan synthase activity
GNY17_17755	COG0133	tryptophan synthase activity
GNY17_17760	COG0135	phosphoribosylanthranilate isomerase activity
GNY17_17760	COG0134	indole-3-glycerol-phosphate synthase activity
GNY17_17765	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GNY17_17770	COG0512	Glutamine amidotransferase of anthranilate synthase
GNY17_17775	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GNY17_17785	COG0613	PHP domain protein
GNY17_17790	COG0009	L-threonylcarbamoyladenylate synthase
GNY17_17800	COG1187	pseudouridine synthase activity
GNY17_17810	COG3099	Belongs to the UPF0263 family
GNY17_17815	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GNY17_17825	COG0417	DNA replication proofreading
GNY17_17830	COG2197	response regulator
GNY17_17835	COG0322	excinuclease ABC activity
GNY17_17875	COG0019	diaminopimelate decarboxylase activity
GNY17_17900	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNY17_17905	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNY17_17910	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GNY17_17930	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
GNY17_17940	COG0437	4 iron, 4 sulfur cluster binding
GNY17_17945	COG3301	Polysulphide reductase, NrfD
GNY17_17950	COG1138	Cytochrome C-type biogenesis protein
GNY17_17960	COG4235	cytochrome complex assembly
GNY17_17960	COG3088	subunit of a heme lyase
GNY17_17970	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GNY17_17995	COG2989	Protein conserved in bacteria
GNY17_18000	COG3108	Peptidase M15
GNY17_18005	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNY17_18020	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
GNY17_18045	COG1846	Transcriptional regulator
GNY17_18060	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GNY17_18065	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
GNY17_18080	COG0745	RESPONSE REGULATOR receiver
GNY17_18080	COG3706	GGDEF domain
GNY17_18090	COG5001	Diguanylate cyclase
GNY17_18090	COG3706	GGDEF domain
GNY17_18090	COG4251	negative regulation of phosphorylation
GNY17_18090	COG2203	Gaf domain
GNY17_18100	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
GNY17_18105	COG4149	molybdate abc transporter
GNY17_18110	COG0725	ABC transporter, periplasmic molybdate-binding protein
GNY17_18115	COG1492	cobalamin metabolic process
GNY17_18120	COG3111	PFAM Bacterial OB fold (BOF) protein
GNY17_18130	COG4067	protein conserved in archaea
GNY17_18130	COG0189	ligase activity
GNY17_18150	COG0534	Mate efflux family protein
GNY17_18155	COG0602	queuosine metabolic process
GNY17_18160	COG1328	CTP reductase activity
GNY17_18175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNY17_18205	COG0243	molybdopterin cofactor binding
GNY17_18215	COG0583	DNA-binding transcription factor activity
GNY17_18220	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GNY17_18230	COG2197	response regulator
GNY17_18235	COG3851	Histidine kinase
GNY17_18240	COG2271	Major facilitator Superfamily
GNY17_18265	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GNY17_18270	COG3118	belongs to the thioredoxin family
GNY17_18275	COG2814	Major facilitator Superfamily
GNY17_18285	COG0534	Mate efflux family protein
GNY17_18315	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GNY17_18335	COG2116	formate transmembrane transporter activity
GNY17_18340	COG2146	nitrite reductase [NAD(P)H] activity
GNY17_18345	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GNY17_18350	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GNY17_18390	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GNY17_18390	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GNY17_18435	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNY17_18455	COG0277	FAD linked oxidase domain protein
GNY17_18460	COG0583	DNA-binding transcription factor activity
GNY17_18480	COG2425	protein containing a von Willebrand factor type A (vWA) domain
GNY17_18495	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
GNY17_18510	COG1288	antiporter activity
GNY17_18520	COG2814	Major facilitator Superfamily
GNY17_18530	COG3040	lipid binding
GNY17_18550	COG0419	ATPase involved in DNA repair
GNY17_18555	COG0420	3'-5' exonuclease activity
GNY17_18570	COG3501	Rhs element vgr protein
GNY17_18625	COG0631	protein serine/threonine phosphatase activity
GNY17_18660	COG0515	serine threonine protein kinase
GNY17_18660	COG2815	serine threonine protein kinase
GNY17_18715	COG2146	nitrite reductase [NAD(P)H] activity
GNY17_18715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GNY17_18720	COG1116	anion transmembrane transporter activity
GNY17_18725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNY17_18730	COG1116	anion transmembrane transporter activity
GNY17_18730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNY17_18740	COG3707	response regulator
GNY17_18765	COG0243	molybdopterin cofactor binding
GNY17_18775	COG0814	amino acid
GNY17_18785	COG0745	RESPONSE REGULATOR receiver
GNY17_18785	COG3706	GGDEF domain
GNY17_18805	COG1785	Belongs to the alkaline phosphatase family
GNY17_18820	COG0745	RESPONSE REGULATOR receiver
GNY17_18840	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
GNY17_18855	COG1609	Transcriptional regulator
GNY17_18860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNY17_18865	COG1879	ABC-type sugar transport system periplasmic component
GNY17_18870	COG1172	Belongs to the binding-protein-dependent transport system permease family
GNY17_18875	COG1129	ABC transporter
GNY17_18880	COG1869	D-ribose catabolic process
GNY17_18885	COG5001	Diguanylate cyclase
GNY17_18890	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GNY17_18950	COG2205	protein histidine kinase activity
GNY17_18950	COG0784	Response regulator, receiver
GNY17_18970	COG5001	Diguanylate cyclase
GNY17_18970	COG3300	MHYT domain
GNY17_18980	COG0330	HflC and HflK could
GNY17_18995	COG0517	IMP dehydrogenase activity
GNY17_18995	COG4175	Glycine betaine
GNY17_19000	COG4176	ABC-type proline glycine betaine transport system permease component
GNY17_19015	COG1012	belongs to the aldehyde dehydrogenase family
GNY17_19020	COG1309	transcriptional regulator
GNY17_19025	COG3706	GGDEF domain
GNY17_19035	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_19050	COG1024	Enoyl-CoA hydratase
GNY17_19055	COG1960	acyl-CoA dehydrogenase activity
GNY17_19065	COG0183	Belongs to the thiolase family
GNY17_19075	COG1960	acyl-CoA dehydrogenase activity
GNY17_19080	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GNY17_19100	COG4999	Histidine kinase
GNY17_19100	COG2205	protein histidine kinase activity
GNY17_19100	COG3437	response regulator, receiver
GNY17_19100	COG3850	Histidine kinase
GNY17_19115	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
GNY17_19115	COG3264	Mechanosensitive ion channel
GNY17_19125	COG0110	maltose O-acetyltransferase activity
GNY17_19130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNY17_19135	COG1271	oxidase subunit
GNY17_19140	COG1294	oxidase, subunit
GNY17_19150	COG0384	phenazine biosynthesis protein PhzF
GNY17_19155	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GNY17_19160	COG0789	Transcriptional regulator
GNY17_19170	COG3474	cytochrome
GNY17_19240	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GNY17_19245	COG0516	GMP reductase activity
GNY17_19250	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GNY17_19250	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GNY17_19265	COG4989	oxidoreductase activity
GNY17_19280	COG0038	chloride channel
GNY17_19290	COG1914	H( )-stimulated, divalent metal cation uptake system
GNY17_19295	COG0302	gtp cyclohydrolase
GNY17_19305	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNY17_19325	COG2897	thiosulfate sulfurtransferase activity
GNY17_19350	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GNY17_19355	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GNY17_19360	COG0840	transmembrane signaling receptor activity
GNY17_19370	COG2814	Major facilitator Superfamily
GNY17_19375	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GNY17_19385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GNY17_19395	COG0840	transmembrane signaling receptor activity
GNY17_19415	COG2195	Cleaves the N-terminal amino acid of tripeptides
GNY17_19430	COG2197	response regulator
GNY17_19435	COG3850	Histidine kinase
GNY17_19440	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GNY17_19450	COG0243	molybdopterin cofactor binding
GNY17_19460	COG3005	denitrification pathway
GNY17_19480	COG0183	Belongs to the thiolase family
GNY17_19500	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNY17_19505	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNY17_19530	COG1522	sequence-specific DNA binding
GNY17_19550	COG1566	PFAM secretion protein HlyD family protein
GNY17_19560	COG2205	protein histidine kinase activity
GNY17_19560	COG0784	Response regulator, receiver
GNY17_19565	COG1879	ABC-type sugar transport system periplasmic component
GNY17_19570	COG2827	Endonuclease containing a URI domain
GNY17_19575	COG3132	Protein of unknown function, DUF480
GNY17_19590	COG2926	Belongs to the UPF0265 family
GNY17_19595	COG0534	Mate efflux family protein
GNY17_19600	COG0673	inositol 2-dehydrogenase activity
GNY17_19605	COG0784	Response regulator, receiver
GNY17_19605	COG2205	protein histidine kinase activity
GNY17_19605	COG5002	protein histidine kinase activity
GNY17_19630	COG1522	sequence-specific DNA binding
GNY17_19640	COG0531	amino acid
GNY17_19655	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GNY17_19660	COG2239	Acts as a magnesium transporter
GNY17_19665	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GNY17_19670	COG0402	S-adenosylhomocysteine deaminase activity
GNY17_19680	COG1418	mRNA catabolic process
GNY17_19695	COG2814	Major facilitator Superfamily
GNY17_19705	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GNY17_19725	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GNY17_19745	COG4221	oxidoreductase activity
GNY17_19750	COG0745	RESPONSE REGULATOR receiver
GNY17_19755	COG2205	protein histidine kinase activity
GNY17_19765	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GNY17_19770	COG2194	sulfuric ester hydrolase activity
GNY17_19775	COG0673	inositol 2-dehydrogenase activity
GNY17_19800	COG1846	Transcriptional regulator
GNY17_19810	COG4667	esterase of the alpha-beta hydrolase superfamily
GNY17_19815	COG1741	Belongs to the pirin family
GNY17_19820	COG1278	Cold shock
GNY17_19840	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GNY17_19860	COG1686	Belongs to the peptidase S11 family
GNY17_19870	COG0625	glutathione transferase activity
GNY17_19880	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GNY17_19895	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_19910	COG3746	phosphate-selective porin O and P
GNY17_19930	COG3833	ABC-type maltose transport systems, permease component
GNY17_19935	COG1175	transmembrane transport
GNY17_19945	COG3842	ATPase activity
GNY17_19975	COG0438	transferase activity, transferring glycosyl groups
GNY17_20010	COG1309	transcriptional regulator
GNY17_20015	COG2130	NADP-dependent
GNY17_20025	COG0753	catalase activity
GNY17_20030	COG2084	Dehydrogenase
GNY17_20035	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_20040	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_20050	COG2207	Transcriptional regulator
GNY17_20055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_20055	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_20055	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_20070	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GNY17_20075	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
GNY17_20080	COG5001	Diguanylate cyclase
GNY17_20080	COG3300	MHYT domain
GNY17_20085	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNY17_20090	COG0569	domain protein
GNY17_20100	COG5002	protein histidine kinase activity
GNY17_20105	COG1132	(ABC) transporter
GNY17_20110	COG4774	siderophore transport
GNY17_20115	COG1120	ATPase activity
GNY17_20120	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
GNY17_20135	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GNY17_20135	COG2885	chlorophyll binding
GNY17_20150	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_20170	COG2197	response regulator
GNY17_20180	COG0840	transmembrane signaling receptor activity
GNY17_20190	COG0714	Associated with various cellular activities
GNY17_20210	COG2304	oxidoreductase activity
GNY17_20230	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GNY17_20235	COG0581	inorganic phosphate transmembrane transporter activity
GNY17_20240	COG0573	inorganic phosphate transmembrane transporter activity
GNY17_20245	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GNY17_20270	COG4771	TonB-dependent receptor
GNY17_20275	COG1770	oligopeptidase
GNY17_20280	COG0513	Belongs to the DEAD box helicase family
GNY17_20290	COG1388	LysM domain
GNY17_20290	COG1376	ErfK ybiS ycfS ynhG family protein
GNY17_20295	COG0415	Belongs to the DNA photolyase family
GNY17_20300	COG0789	Transcriptional regulator
GNY17_20305	COG3272	Protein of unknown function (DUF1722)
GNY17_20315	COG0813	purine-nucleoside phosphorylase activity
GNY17_20330	COG3706	GGDEF domain
GNY17_20340	COG1566	PFAM secretion protein HlyD family protein
GNY17_20345	COG4720	Psort location CytoplasmicMembrane, score
GNY17_20350	COG1122	ATPase activity
GNY17_20365	COG0348	domain, Protein
GNY17_20370	COG0437	4 iron, 4 sulfur cluster binding
GNY17_20375	COG1247	-acetyltransferase
GNY17_20405	COG1067	ATP-dependent peptidase activity
GNY17_20415	COG4172	Belongs to the ABC transporter superfamily
GNY17_20420	COG1505	serine-type exopeptidase activity
GNY17_20425	COG0583	DNA-binding transcription factor activity
GNY17_20430	COG1620	l-lactate permease
GNY17_20435	COG1304	FMN binding
GNY17_20445	COG0668	transmembrane transport
GNY17_20485	COG1063	alcohol dehydrogenase
GNY17_20490	COG0156	8-amino-7-oxononanoate synthase activity
GNY17_20500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_20520	COG0745	RESPONSE REGULATOR receiver
GNY17_20555	COG0346	lactoylglutathione lyase activity
GNY17_20575	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GNY17_20615	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNY17_20630	COG2204	response regulator
GNY17_20655	COG1987	bacterial-type flagellum assembly
GNY17_20665	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GNY17_20680	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_20690	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GNY17_20695	COG1516	flagellar protein fliS
GNY17_20710	COG1580	Controls the rotational direction of flagella during chemotaxis
GNY17_20715	COG1191	sigma factor activity
GNY17_20720	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GNY17_20725	COG1360	Flagellar Motor Protein
GNY17_20760	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNY17_20765	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GNY17_20775	COG0454	-acetyltransferase
GNY17_20785	COG2814	Major facilitator Superfamily
GNY17_20915	COG0628	permease
GNY17_20920	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
GNY17_20930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GNY17_20940	COG4628	conserved protein (DUF2132)
GNY17_20945	COG0583	DNA-binding transcription factor activity
GNY17_20970	COG1686	Belongs to the peptidase S11 family
GNY17_20990	COG3397	chitin binding
GNY17_20995	COG4667	esterase of the alpha-beta hydrolase superfamily
GNY17_21000	COG2095	MarC family integral membrane protein
GNY17_21020	COG3206	protein involved in exopolysaccharide biosynthesis
GNY17_21020	COG0489	protein tyrosine kinase activity
GNY17_21035	COG0583	DNA-binding transcription factor activity
GNY17_21045	COG1301	dicarboxylic acid transport
GNY17_21050	COG3339	Conserved Protein
GNY17_21055	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNY17_21060	COG0700	Nucleoside recognition
GNY17_21065	COG3366	ferrous iron transmembrane transporter activity
GNY17_21080	COG0366	Alpha amylase catalytic
GNY17_21085	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNY17_21090	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GNY17_21095	COG1640	4-alpha-glucanotransferase
GNY17_21100	COG0058	SHG alpha-glucan phosphorylase activity
GNY17_21115	COG2909	trisaccharide binding
GNY17_21130	COG1999	signal sequence binding
GNY17_21140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNY17_21140	COG1263	PTS System
GNY17_21145	COG1162	GTPase activity
GNY17_21150	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
GNY17_21160	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
GNY17_21170	COG0531	amino acid
GNY17_21175	COG1982	Orn Lys Arg decarboxylase major
GNY17_21195	COG2356	endonuclease I
GNY17_21220	COG4580	involved in the transport of maltose and maltodextrins
GNY17_21245	COG0739	heme binding
GNY17_21255	COG0612	Peptidase, M16
GNY17_21260	COG0840	transmembrane signaling receptor activity
GNY17_21265	COG1120	ATPase activity
GNY17_21270	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNY17_21275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNY17_21280	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
GNY17_21285	COG4772	TonB-dependent receptor
GNY17_21305	COG2814	Major facilitator Superfamily
GNY17_21310	COG4264	IucA IucC family
GNY17_21315	COG0019	diaminopimelate decarboxylase activity
GNY17_21320	COG1653	transport
GNY17_21330	COG0745	RESPONSE REGULATOR receiver
GNY17_21355	COG1172	Belongs to the binding-protein-dependent transport system permease family
GNY17_21360	COG1129	ABC transporter
GNY17_21365	COG1879	ABC-type sugar transport system periplasmic component
GNY17_21370	COG1069	ribulokinase activity
GNY17_21380	COG2160	L-arabinose isomerase activity
GNY17_21405	COG1764	response to oxidative stress
GNY17_21410	COG1846	Transcriptional regulator
GNY17_21415	COG0450	alkyl hydroperoxide reductase
GNY17_21420	COG3634	alkyl hydroperoxide reductase activity
GNY17_21450	COG1595	DNA-templated transcription, initiation
GNY17_21465	COG0840	transmembrane signaling receptor activity
GNY17_21470	COG0583	DNA-binding transcription factor activity
GNY17_21475	COG1486	melibiose metabolic process
GNY17_21490	COG2258	MOSC domain
GNY17_21495	COG0513	Belongs to the DEAD box helicase family
GNY17_21505	COG2186	Transcriptional regulator
GNY17_21515	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GNY17_21525	COG0246	Mannitol dehydrogenase
GNY17_21535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNY17_21540	COG0800	Aldolase
GNY17_21565	COG2207	Transcriptional regulator
GNY17_21575	COG1132	(ABC) transporter
GNY17_21620	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNY17_21650	COG0259	pyridoxamine-phosphate oxidase activity
GNY17_21695	COG4166	transmembrane transport
GNY17_21715	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GNY17_21720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNY17_21720	COG1263	PTS System
GNY17_21725	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GNY17_21730	COG3340	Belongs to the peptidase S51 family
GNY17_21750	COG1444	tRNA N-acetyltransferase activity
GNY17_21775	COG4608	Belongs to the ABC transporter superfamily
GNY17_21780	COG0444	Belongs to the ABC transporter superfamily
GNY17_21790	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
GNY17_21790	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GNY17_21815	COG0217	transcriptional regulatory protein
GNY17_21820	COG0772	Belongs to the SEDS family
GNY17_21855	COG3275	phosphorelay sensor kinase activity
GNY17_21860	COG3279	Response regulator of the LytR AlgR family
GNY17_21870	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GNY17_21905	COG0786	glutamate:sodium symporter activity
GNY17_21915	COG1131	(ABC) transporter
GNY17_21920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNY17_21925	COG0786	glutamate:sodium symporter activity
GNY17_21940	COG0363	glucosamine-6-phosphate deaminase activity
GNY17_21960	COG1741	Belongs to the pirin family
GNY17_21965	COG2259	Doxx family
GNY17_21980	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GNY17_21985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GNY17_21995	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNY17_22035	COG3123	guanosine phosphorylase activity
GNY17_22045	COG5001	Diguanylate cyclase
GNY17_22055	COG0534	Mate efflux family protein
GNY17_22060	COG0564	pseudouridine synthase activity
GNY17_22075	COG0583	DNA-binding transcription factor activity
GNY17_22080	COG0561	phosphatase activity
GNY17_22090	COG2199	diguanylate cyclase activity
GNY17_22105	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
GNY17_22110	COG2162	N-hydroxyarylamine O-acetyltransferase activity
GNY17_22115	COG0583	DNA-binding transcription factor activity
GNY17_22130	COG1414	Transcriptional regulator
GNY17_22135	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_22145	COG1917	Cupin 2, conserved barrel domain protein
GNY17_22160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNY17_22165	COG0800	Aldolase
GNY17_22185	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNY17_22190	COG0823	Involved in the tonB-independent uptake of proteins
GNY17_22195	COG2375	cellular response to nickel ion
GNY17_22225	COG1357	PFAM Pentapeptide repeats (8 copies)
GNY17_22230	COG3047	cAMP biosynthetic process
GNY17_22260	COG3408	Glycogen debranching enzyme
GNY17_22260	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
GNY17_22265	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
GNY17_22275	COG0583	DNA-binding transcription factor activity
GNY17_22285	COG0583	DNA-binding transcription factor activity
GNY17_22300	COG0546	phosphoglycolate phosphatase activity
GNY17_22325	COG3835	regulator
GNY17_22330	COG2610	gluconate transmembrane transporter activity
GNY17_22335	COG1929	Belongs to the glycerate kinase type-1 family
GNY17_22340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNY17_22360	COG0456	acetyltransferase
GNY17_22360	COG0454	-acetyltransferase
GNY17_22375	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_22385	COG3005	denitrification pathway
GNY17_22390	COG0243	molybdopterin cofactor binding
GNY17_22400	COG0352	thiamine-phosphate diphosphorylase activity
GNY17_22405	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GNY17_22410	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GNY17_22415	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNY17_22420	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNY17_22425	COG1116	anion transmembrane transporter activity
GNY17_22430	COG0351	phosphomethylpyrimidine kinase
GNY17_22440	COG0312	modulator of DNA gyrase
GNY17_22445	COG0312	modulator of DNA gyrase
GNY17_22450	COG1901	pseudouridine methyltransferase
GNY17_22510	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GNY17_22520	COG0584	glycerophosphoryl diester phosphodiesterase
GNY17_22530	COG0745	RESPONSE REGULATOR receiver
GNY17_22550	COG0811	peptide transport
GNY17_22555	COG0811	peptide transport
GNY17_22560	COG0848	biopolymer transport protein
GNY17_22600	COG0803	Belongs to the bacterial solute-binding protein 9 family
GNY17_22605	COG1121	(ABC) transporter
GNY17_22610	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GNY17_22625	COG1770	oligopeptidase
GNY17_22630	COG2814	Major facilitator Superfamily
GNY17_22635	COG0010	Belongs to the arginase family
GNY17_22640	COG1166	arginine decarboxylase activity
GNY17_22650	COG4067	protein conserved in archaea
GNY17_22650	COG0189	ligase activity
GNY17_22655	COG0189	ligase activity
GNY17_22665	COG0583	DNA-binding transcription factor activity
GNY17_22710	COG3706	GGDEF domain
GNY17_22740	COG0579	oxidoreductase
GNY17_22750	COG3033	Beta-eliminating lyase
GNY17_22770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNY17_22780	COG3145	DNA-N1-methyladenine dioxygenase activity
GNY17_22785	COG3706	GGDEF domain
GNY17_22790	COG0840	transmembrane signaling receptor activity
GNY17_22805	COG3706	GGDEF domain
GNY17_22810	COG0415	Belongs to the DNA photolyase family
GNY17_22815	COG3046	protein related to deoxyribodipyrimidine photolyase
GNY17_22830	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNY17_22830	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNY17_22835	COG1765	OsmC-like protein
GNY17_22840	COG0110	maltose O-acetyltransferase activity
GNY17_22880	COG1011	Hydrolase
GNY17_22895	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
GNY17_22905	COG2067	long-chain fatty acid transport protein
GNY17_22910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_22915	COG1136	(ABC) transporter
GNY17_22915	COG0577	efflux transmembrane transporter activity
GNY17_22925	COG3240	lipase activity
GNY17_22955	COG1609	Transcriptional regulator
GNY17_22960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GNY17_22975	COG1840	ABC-type Fe3 transport system, periplasmic component
GNY17_23005	COG2842	Transposition protein
GNY17_23030	COG3081	Nucleoid-associated protein
GNY17_23270	COG2990	Protein conserved in bacteria
GNY17_23280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNY17_23285	COG2866	Carboxypeptidase
GNY17_23300	COG0583	DNA-binding transcription factor activity
GNY17_23325	COG1760	l-serine dehydratase
GNY17_23345	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GNY17_23355	COG0741	lytic transglycosylase activity
GNY17_23375	COG1815	bacterial-type flagellum-dependent cell motility
GNY17_23380	COG1558	bacterial-type flagellum-dependent cell motility
GNY17_23385	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GNY17_23390	COG1749	Flagellar hook protein flgE
GNY17_23395	COG4787	bacterial-type flagellum-dependent cell motility
GNY17_23400	COG4786	Flagellar basal body rod
GNY17_23405	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GNY17_23410	COG1706	bacterial-type flagellum-dependent cell motility
GNY17_23420	COG1256	bacterial-type flagellum assembly
GNY17_23420	COG4786	Flagellar basal body rod
GNY17_23425	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNY17_23445	COG1304	FMN binding
GNY17_23475	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNY17_23485	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GNY17_23490	COG0459	protein refolding
GNY17_23505	COG1280	lysine exporter protein (LysE YggA)
GNY17_23525	COG1309	transcriptional regulator
GNY17_23535	COG0737	Belongs to the 5'-nucleotidase family
GNY17_23540	COG2070	2-Nitropropane dioxygenase
GNY17_23545	COG3537	Alpha-1,2-mannosidase
GNY17_23555	COG3537	Alpha-1,2-mannosidase
GNY17_23560	COG3537	Alpha-1,2-mannosidase
GNY17_23565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_23590	COG1349	DNA-binding transcription factor activity
GNY17_23600	COG0753	catalase activity
GNY17_23610	COG1335	isochorismatase
GNY17_23620	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GNY17_23650	COG0583	DNA-binding transcription factor activity
GNY17_23665	COG3713	MltA-interacting MipA family protein
GNY17_23675	COG3015	lipoprotein NlpE involved in copper resistance
GNY17_23685	COG1342	Belongs to the UPF0251 family
GNY17_23710	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GNY17_23720	COG4948	Mandelate Racemase Muconate Lactonizing
GNY17_23730	COG0583	DNA-binding transcription factor activity
GNY17_23780	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNY17_23825	COG3842	ATPase activity
GNY17_23855	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNY17_23875	COG3706	GGDEF domain
GNY17_23895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_23910	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GNY17_23915	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GNY17_23935	COG0574	Belongs to the PEP-utilizing enzyme family
GNY17_23935	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GNY17_23940	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
GNY17_23945	COG0252	asparaginase activity
GNY17_23955	COG0583	DNA-binding transcription factor activity
GNY17_23970	COG3122	Protein conserved in bacteria
GNY17_23985	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_23995	COG1063	alcohol dehydrogenase
GNY17_24000	COG1902	pentaerythritol trinitrate reductase activity
GNY17_24015	COG0583	DNA-binding transcription factor activity
GNY17_24025	COG0513	Belongs to the DEAD box helicase family
GNY17_24070	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNY17_24075	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNY17_24075	COG2207	Transcriptional regulator
GNY17_24105	COG2354	Protein conserved in bacteria
GNY17_24110	COG0418	dihydroorotase activity
GNY17_24120	COG0401	homolog of Blt101
GNY17_24130	COG0633	Ferredoxin
GNY17_24130	COG3217	Mosc domain protein beta barrel domain protein
GNY17_24130	COG0633	Ferredoxin
GNY17_24130	COG3217	Mosc domain protein beta barrel domain protein
GNY17_24135	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GNY17_24140	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GNY17_24180	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
GNY17_24185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNY17_24195	COG0848	biopolymer transport protein
GNY17_24200	COG0811	peptide transport
GNY17_24205	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GNY17_24215	COG3721	Heme iron utilization protein
GNY17_24220	COG0748	coenzyme F420 binding
GNY17_24230	COG0784	Response regulator, receiver
GNY17_24230	COG0835	chemotaxis
GNY17_24240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GNY17_24250	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNY17_24250	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
GNY17_24275	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
GNY17_24280	COG0783	Belongs to the Dps family
GNY17_24290	COG0583	DNA-binding transcription factor activity
GNY17_24305	COG4934	collagen metabolic process
GNY17_24315	COG0366	Alpha amylase catalytic
GNY17_24335	COG2249	NAD(P)H dehydrogenase (quinone) activity
GNY17_24340	COG0589	response to stress
GNY17_24345	COG0488	(ABC) transporter
GNY17_24350	COG1505	serine-type exopeptidase activity
GNY17_24360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GNY17_24370	COG2067	long-chain fatty acid transport protein
GNY17_24380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNY17_24390	COG2203	Gaf domain
GNY17_24390	COG2199	diguanylate cyclase activity
GNY17_24410	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNY17_24435	COG3383	formate dehydrogenase (NAD+) activity
GNY17_24450	COG0842	Transport permease protein
GNY17_24455	COG1131	(ABC) transporter
GNY17_24465	COG0840	transmembrane signaling receptor activity
GNY17_24470	COG2706	6-phosphogluconolactonase activity
GNY17_24480	COG1881	PFAM PEBP family protein
GNY17_24490	COG0798	PFAM Bile acid sodium symporter
GNY17_24510	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_24515	COG2213	PTS system mannitol-specific
GNY17_24520	COG1063	alcohol dehydrogenase
GNY17_24530	COG1072	(Pantothenic acid kinase))
GNY17_24535	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GNY17_24555	COG0814	amino acid
GNY17_24595	COG0739	heme binding
GNY17_24600	COG5001	Diguanylate cyclase
GNY17_24605	COG0583	DNA-binding transcription factor activity
GNY17_24610	COG2814	Major facilitator Superfamily
GNY17_24635	COG0697	spore germination
GNY17_24640	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GNY17_24665	COG2207	Transcriptional regulator
GNY17_24670	COG1280	lysine exporter protein (LysE YggA)
GNY17_24680	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GNY17_24685	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GNY17_24695	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
GNY17_24720	COG1612	heme a metabolic process
GNY17_24725	COG0109	protoheme IX farnesyltransferase activity
GNY17_24730	COG0545	Peptidyl-prolyl cis-trans isomerase
GNY17_24765	COG1278	Cold shock
GNY17_24770	COG3036	rescue of stalled ribosome
GNY17_24785	COG2199	diguanylate cyclase activity
GNY17_24805	COG0577	efflux transmembrane transporter activity
GNY17_24805	COG1136	(ABC) transporter
GNY17_24815	COG0840	transmembrane signaling receptor activity
GNY17_24820	COG0783	Belongs to the Dps family
GNY17_24830	COG2133	pyrroloquinoline quinone binding
GNY17_24835	COG1454	alcohol dehydrogenase
GNY17_24840	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
GNY17_24880	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GNY17_24885	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GNY17_24890	COG3186	Phenylalanine-4-hydroxylase
GNY17_24895	COG2154	pterin-4-alpha-carbinolamine dehydratase
GNY17_24920	COG3530	Putative quorum-sensing-regulated virulence factor
GNY17_24925	COG0513	Belongs to the DEAD box helicase family
GNY17_24930	COG4628	conserved protein (DUF2132)
GNY17_24935	COG0133	tryptophan synthase activity
GNY17_24945	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GNY17_24955	COG0523	cobalamin synthesis protein
GNY17_24960	COG0513	Belongs to the DEAD box helicase family
GNY17_24980	COG2200	EAL domain
GNY17_24985	COG1119	ATPase activity
GNY17_24990	COG0840	transmembrane signaling receptor activity
GNY17_25015	COG0641	radical SAM
GNY17_25035	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GNY17_25050	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
GNY17_25055	COG0513	Belongs to the DEAD box helicase family
GNY17_25060	COG5001	Diguanylate cyclase
GNY17_25070	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GNY17_25085	COG5413	integral membrane protein
GNY17_25095	COG1024	Enoyl-CoA hydratase
GNY17_25100	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GNY17_25105	COG1960	acyl-CoA dehydrogenase activity
GNY17_25115	COG0183	Belongs to the thiolase family
GNY17_25130	COG1024	Enoyl-CoA hydratase
GNY17_25135	COG1024	Enoyl-CoA hydratase
GNY17_25145	COG1028	Short-chain dehydrogenase reductase Sdr
GNY17_25150	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GNY17_25155	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GNY17_25160	COG1845	cytochrome c oxidase, subunit III
GNY17_25165	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GNY17_25170	COG0109	protoheme IX farnesyltransferase activity
GNY17_25185	COG1902	pentaerythritol trinitrate reductase activity
GNY17_25215	COG1126	abc transporter atp-binding protein
GNY17_25220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_25225	COG4215	(ABC) transporter
GNY17_25230	COG4160	amino acid transport
GNY17_25245	COG0625	glutathione transferase activity
GNY17_25285	COG0443	Heat shock 70 kDa protein
GNY17_25290	COG2847	Copper chaperone PCu(A)C
GNY17_25315	COG4607	ABC-type enterochelin transport system periplasmic component
GNY17_25320	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNY17_25325	COG4605	iron ion homeostasis
GNY17_25330	COG4604	ABC transporter, ATP-binding protein
GNY17_25335	COG0789	Transcriptional regulator
GNY17_25350	COG4771	TonB-dependent receptor
GNY17_25350	COG1629	transport
GNY17_25385	COG1289	transmembrane transporter activity
GNY17_25390	COG0210	DNA helicase
GNY17_25395	COG1803	Methylglyoxal synthase
GNY17_25400	COG1879	ABC-type sugar transport system periplasmic component
GNY17_25405	COG2205	protein histidine kinase activity
GNY17_25405	COG2198	Histidine kinase
GNY17_25405	COG0784	Response regulator, receiver
GNY17_25420	COG0745	RESPONSE REGULATOR receiver
GNY17_25425	COG3119	arylsulfatase activity
GNY17_25430	COG3119	arylsulfatase activity
GNY17_25445	COG3119	arylsulfatase activity
GNY17_25450	COG0641	radical SAM
GNY17_25455	COG0714	Associated with various cellular activities
GNY17_25485	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GNY17_25490	COG0583	DNA-binding transcription factor activity
GNY17_25495	COG1597	lipid kinase activity
GNY17_25500	COG3111	PFAM Bacterial OB fold (BOF) protein
GNY17_25520	COG0641	radical SAM
GNY17_25550	COG0501	Belongs to the peptidase M48B family
GNY17_25555	COG1704	LemA family
GNY17_25560	COG3069	C4-dicarboxylate transmembrane transporter activity
GNY17_25570	COG0456	acetyltransferase
GNY17_25570	COG1214	PFAM Peptidase M22, glycoprotease
GNY17_25590	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GNY17_25610	COG2207	Transcriptional regulator
GNY17_25635	COG4964	Belongs to the GSP D family
GNY17_25705	COG0583	DNA-binding transcription factor activity
GNY17_25710	COG0583	DNA-binding transcription factor activity
GNY17_25725	COG5001	Diguanylate cyclase
GNY17_25725	COG3300	MHYT domain
GNY17_25730	COG2197	response regulator
GNY17_25735	COG3706	GGDEF domain
GNY17_25745	COG2197	response regulator
GNY17_25770	COG0784	Response regulator, receiver
GNY17_25770	COG0835	chemotaxis
GNY17_25790	COG2962	Rard protein
GNY17_25805	COG0671	phosphoesterase, PA-phosphatase related
GNY17_25820	COG2076	Multidrug Resistance protein
GNY17_25850	COG0471	metal ion transport
GNY17_25855	COG3290	protein histidine kinase activity
GNY17_25860	COG4565	transcriptional regulatory protein
GNY17_25870	COG0069	glutamate synthase activity
GNY17_25870	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
GNY17_25880	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
GNY17_25905	COG1902	pentaerythritol trinitrate reductase activity
GNY17_25910	COG0346	lactoylglutathione lyase activity
GNY17_25930	COG2239	Acts as a magnesium transporter
GNY17_25960	COG0242	peptide deformylase activity
GNY17_26010	COG2176	DNA-directed DNA polymerase activity
GNY17_26015	COG0583	DNA-binding transcription factor activity
GNY17_26020	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GNY17_26070	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GNY17_26070	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GNY17_26075	COG0509	glycine decarboxylation via glycine cleavage system
GNY17_26080	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GNY17_26120	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_26120	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
GNY17_26120	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNY17_26125	COG1105	Belongs to the carbohydrate kinase PfkB family
GNY17_26130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_26130	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNY17_26135	COG1609	Transcriptional regulator
GNY17_26155	COG2199	diguanylate cyclase activity
GNY17_26155	COG2200	EAL domain
GNY17_26155	COG2203	Gaf domain
GNY17_26160	COG0765	amino acid transport
GNY17_26165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNY17_26170	COG0765	amino acid transport
GNY17_26175	COG1126	abc transporter atp-binding protein
GNY17_26180	COG0469	pyruvate kinase activity
GNY17_26185	COG2271	Major facilitator Superfamily
GNY17_26190	COG1840	ABC-type Fe3 transport system, periplasmic component
GNY17_26210	COG1979	alcohol dehydrogenase
GNY17_26215	COG2207	Transcriptional regulator
GNY17_26230	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GNY17_26235	COG2759	Belongs to the formate--tetrahydrofolate ligase family
GNY17_26240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNY17_26260	COG0784	Response regulator, receiver
GNY17_26260	COG3437	response regulator, receiver
GNY17_26270	COG0546	phosphoglycolate phosphatase activity
GNY17_26275	COG0840	transmembrane signaling receptor activity
GNY17_26285	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
GNY17_26290	COG0513	Belongs to the DEAD box helicase family
GNY17_26295	COG4943	cyclic-guanylate-specific phosphodiesterase activity
GNY17_26310	COG3038	cytochrome b561
GNY17_26315	COG2353	YceI-like domain
GNY17_26320	COG2116	formate transmembrane transporter activity
GNY17_26325	COG0583	DNA-binding transcription factor activity
GNY17_26335	COG3593	DNA synthesis involved in DNA repair
GNY17_26340	COG0737	Belongs to the 5'-nucleotidase family
GNY17_26345	COG0861	Integral membrane protein TerC family
GNY17_26360	COG2267	carboxylic ester hydrolase activity
GNY17_26365	COG2067	long-chain fatty acid transport protein
GNY17_26380	COG2050	protein possibly involved in aromatic compounds catabolism
GNY17_26390	COG4533	DNA binding
GNY17_26415	COG0484	heat shock protein binding
GNY17_26425	COG3300	MHYT domain
GNY17_26425	COG5001	Diguanylate cyclase
GNY17_26430	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
GNY17_26440	COG4181	ATPase activity
GNY17_26445	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
GNY17_26455	COG1984	allophanate hydrolase subunit 2
GNY17_26460	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GNY17_26465	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
GNY17_26470	COG5001	Diguanylate cyclase
GNY17_26470	COG5002	protein histidine kinase activity
GNY17_26470	COG3447	MASE1 domain protein
GNY17_26475	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GNY17_26490	COG0583	DNA-binding transcription factor activity
GNY17_26495	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNY17_26495	COG1042	CoA-binding domain protein
GNY17_26495	COG0045	succinate-CoA ligase (ADP-forming) activity
GNY17_26505	COG1181	Belongs to the D-alanine--D-alanine ligase family
GNY17_26515	COG0023	Translation Initiation Factor
GNY17_26520	COG4128	Pfam Zonular occludens toxin
GNY17_26565	COG4128	Pfam Zonular occludens toxin
GNY17_26755	COG0583	DNA-binding transcription factor activity
GNY17_26765	COG0589	response to stress
GNY17_26770	COG3140	Belongs to the UPF0181 family
GNY17_26800	COG2885	chlorophyll binding
GNY17_26840	COG5492	domain, Protein
GNY17_26840	COG4932	domain protein
GNY17_26880	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GNY17_26985	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GNY17_27020	COG3504	Conjugal transfer protein
GNY17_27040	COG4962	Type ii secretion system protein e
GNY17_27050	COG3451	type IV secretory pathway VirB4
GNY17_27055	COG5268	conjugation
GNY17_27090	COG1192	Involved in chromosome partitioning
GNY17_27285	COG0739	heme binding
GNY17_27300	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
GNY17_27320	COG5492	domain, Protein
GNY17_27320	COG4932	domain protein
GNY17_27340	COG4974	Belongs to the 'phage' integrase family
GNY17_27350	COG2337	Toxic component of a toxin-antitoxin (TA) module
GNY17_27540	COG0419	ATPase involved in DNA repair
GNY17_27565	COG1192	Involved in chromosome partitioning
GNY17_27595	COG5268	conjugation
GNY17_27600	COG3451	type IV secretory pathway VirB4
GNY17_27610	COG4962	Type ii secretion system protein e
GNY17_27625	COG3504	Conjugal transfer protein
GNY17_27660	COG4962	Type ii secretion system protein e