locus-tag class description IF561_00005 IPR003593 AAA+ ATPase domain IF561_00005 IPR013765 DNA recombination and repair protein RecA IF561_00005 IPR020584 DNA recombination/repair protein RecA, conserved site IF561_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00005 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IF561_00005 IPR023400 DNA recombination and repair protein RecA, C-terminal IF561_00005 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface IF561_00010 IPR003783 Regulatory protein RecX IF561_00010 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00015 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IF561_00015 IPR009000 Translation protein, beta-barrel domain superfamily IF561_00015 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IF561_00015 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IF561_00015 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IF561_00015 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IF561_00015 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IF561_00015 IPR003156 DHHA1 domain IF561_00015 IPR002318 Alanine-tRNA ligase, class IIc IF561_00020 IPR005260 Aspartate kinase, monofunctional class IF561_00020 IPR018042 Aspartate kinase, conserved site IF561_00020 IPR001341 Aspartate kinase IF561_00020 IPR001048 Aspartate/glutamate/uridylate kinase IF561_00020 IPR041740 Aspartokinase catalytic domain IF561_00020 IPR002912 ACT domain IF561_00020 IPR027795 CASTOR, ACT domain IF561_00020 IPR036393 Acetylglutamate kinase-like superfamily IF561_00025 IPR036107 Carbon storage regulator superfamily IF561_00025 IPR003751 Translational regulator CsrA IF561_00085 IPR005899 Sodium ion-translocating decarboxylase IF561_00085 IPR023424 Oxaloacetate decarboxylase gamma chain, probable IF561_00090 IPR013785 Aldolase-type TIM barrel IF561_00090 IPR001882 Biotin-binding site IF561_00090 IPR000089 Biotin/lipoyl attachment IF561_00090 IPR003379 Carboxylase, conserved domain IF561_00090 IPR011053 Single hybrid motif IF561_00090 IPR005776 Oxaloacetate decarboxylase, alpha subunit IF561_00090 IPR000891 Pyruvate carboxyltransferase IF561_00095 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit IF561_00100 IPR011032 GroES-like superfamily IF561_00100 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IF561_00100 IPR013154 Alcohol dehydrogenase, N-terminal IF561_00100 IPR013149 Alcohol dehydrogenase, C-terminal IF561_00100 IPR036291 NAD(P)-binding domain superfamily IF561_00100 IPR020843 Polyketide synthase, enoylreductase domain IF561_00105 IPR032816 SNARE associated Golgi protein IF561_00110 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IF561_00110 IPR007863 Peptidase M16, C-terminal IF561_00110 IPR001431 Peptidase M16, zinc-binding site IF561_00110 IPR011765 Peptidase M16, N-terminal IF561_00115 IPR006334 Glutamate--cysteine ligase, monofunctional IF561_00115 IPR007370 Glutamate--cysteine ligase IF561_00115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IF561_00125 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily IF561_00125 IPR003815 S-ribosylhomocysteinase (LuxS) IF561_00125 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IF561_00130 IPR000644 CBS domain IF561_00130 IPR002550 CNNM, transmembrane domain IF561_00130 IPR036318 FAD-binding, type PCMH-like superfamily IF561_00130 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_00130 IPR005170 Transporter-associated domain IF561_00135 IPR002541 Cytochrome c assembly protein IF561_00140 IPR004125 Signal recognition particle, SRP54 subunit, M-domain IF561_00140 IPR013822 Signal recognition particle SRP54, helical bundle IF561_00140 IPR004780 Signal recognition particle protein IF561_00140 IPR022941 Signal recognition particle, SRP54 subunit IF561_00140 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IF561_00140 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IF561_00140 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily IF561_00140 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00140 IPR003593 AAA+ ATPase domain IF561_00145 IPR000307 Ribosomal protein S16 IF561_00145 IPR020592 Ribosomal protein S16, conserved site IF561_00145 IPR023803 Ribosomal protein S16 domain superfamily IF561_00150 IPR027275 PRC-barrel domain IF561_00150 IPR009000 Translation protein, beta-barrel domain superfamily IF561_00150 IPR011961 16S rRNA processing protein RimM IF561_00150 IPR036976 RimM, N-terminal domain superfamily IF561_00150 IPR011033 PRC-barrel-like superfamily IF561_00150 IPR002676 RimM, N-terminal IF561_00155 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain IF561_00155 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_00155 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal IF561_00155 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria IF561_00155 IPR029028 Alpha/beta knot methyltransferases IF561_00160 IPR001857 Ribosomal protein L19 IF561_00160 IPR018257 Ribosomal protein L19, conserved site IF561_00160 IPR008991 Translation protein SH3-like domain superfamily IF561_00160 IPR038657 Ribosomal protein L19 superfamily IF561_00165 IPR013088 Zinc finger, NHR/GATA-type IF561_00165 IPR005584 DNA gyrase inhibitor YacG IF561_00170 IPR027462 Z ring-associated protein D, C-terminal IF561_00170 IPR009777 Cell division protein ZapD IF561_00170 IPR036268 ZapD domain superfamily IF561_00175 IPR001977 Dephospho-CoA kinase IF561_00175 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00180 IPR000045 Prepilin type IV endopeptidase, peptidase domain IF561_00180 IPR014032 Peptidase A24A, prepilin type IV, bacterial IF561_00180 IPR010627 Peptidase A24A, N-terminal IF561_00185 IPR018076 Type II secretion system F domain IF561_00185 IPR001992 Type II secretion system conserved site IF561_00185 IPR003004 GspF/PilC family IF561_00185 IPR042094 Type II secretion system F domain superfamily IF561_00190 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_00190 IPR013374 ATPase, type IV, pilus assembly, PilB IF561_00190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00190 IPR001482 Type II/IV secretion system protein IF561_00190 IPR042181 Type II secretion system, protein E, N-terminal IF561_00190 IPR007831 General secretory system II, protein E, N-terminal IF561_00195 IPR001082 Fimbrial protein pilin IF561_00195 IPR012902 Prokaryotic N-terminal methylation site IF561_00200 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IF561_00200 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD IF561_00200 IPR004393 Nicotinate-nucleotide pyrophosphorylase IF561_00200 IPR013785 Aldolase-type TIM barrel IF561_00200 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal IF561_00200 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily IF561_00200 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal IF561_00205 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily IF561_00205 IPR002502 N-acetylmuramoyl-L-alanine amidase domain IF561_00210 IPR011711 GntR, C-terminal IF561_00210 IPR000524 Transcription regulator HTH, GntR IF561_00210 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00210 IPR036390 Winged helix DNA-binding domain superfamily IF561_00210 IPR008920 Transcription regulator FadR/GntR, C-terminal IF561_00215 IPR041621 Pyruvate dehydrogenase E1 component, middle domain IF561_00215 IPR005474 Transketolase, N-terminal IF561_00215 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal IF561_00215 IPR004660 Pyruvate dehydrogenase E1 component IF561_00215 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IF561_00215 IPR029061 Thiamin diphosphate-binding fold IF561_00220 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_00220 IPR000089 Biotin/lipoyl attachment IF561_00220 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex IF561_00220 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IF561_00220 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IF561_00220 IPR004167 Peripheral subunit-binding domain IF561_00220 IPR011053 Single hybrid motif IF561_00220 IPR036625 E3-binding domain superfamily IF561_00225 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IF561_00225 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IF561_00225 IPR006258 Dihydrolipoamide dehydrogenase IF561_00225 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IF561_00225 IPR023753 FAD/NAD(P)-binding domain IF561_00225 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_00225 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IF561_00230 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_00230 IPR001647 DNA-binding HTH domain, TetR-type IF561_00230 IPR009057 Homeobox-like domain superfamily IF561_00235 IPR005904 Hypoxanthine phosphoribosyl transferase IF561_00235 IPR000836 Phosphoribosyltransferase domain IF561_00235 IPR029057 Phosphoribosyltransferase-like IF561_00240 IPR001765 Carbonic anhydrase IF561_00240 IPR036874 Carbonic anhydrase superfamily IF561_00240 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site IF561_00245 IPR011547 SLC26A/SulP transporter domain IF561_00245 IPR001902 SLC26A/SulP transporter IF561_00245 IPR002645 STAS domain IF561_00245 IPR036513 STAS domain superfamily IF561_00250 IPR003593 AAA+ ATPase domain IF561_00250 IPR003439 ABC transporter-like IF561_00250 IPR017871 ABC transporter, conserved site IF561_00250 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00255 IPR000412 ABC-2 transporter IF561_00255 IPR013525 ABC-2 type transporter IF561_00260 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase IF561_00260 IPR004960 Bacterial lipid A biosynthesis acyltransferase IF561_00265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_00265 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain IF561_00265 IPR003721 Pantoate-beta-alanine ligase IF561_00265 IPR004821 Cytidyltransferase-like domain IF561_00270 IPR040442 Pyruvate kinase-like domain superfamily IF561_00270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_00270 IPR003700 Ketopantoate hydroxymethyltransferase IF561_00275 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily IF561_00275 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK IF561_00280 IPR010206 Poly(A) polymerase I IF561_00280 IPR002646 Poly A polymerase, head domain IF561_00280 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain IF561_00280 IPR025866 Polymerase A arginine-rich C-terminal domain IF561_00285 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IF561_00285 IPR022380 Glutamyl-Q tRNA(Asp) synthetase IF561_00285 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IF561_00285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_00290 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IF561_00290 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria IF561_00290 IPR000962 Zinc finger, DksA/TraR C4-type IF561_00290 IPR012784 RNA polymerase-binding transcription factor DksA IF561_00290 IPR037187 DksA, N-terminal domain superfamily IF561_00295 IPR005224 Sugar fermentation stimulation protein IF561_00295 IPR041465 SfsA, N-terminal OB domain IF561_00295 IPR040452 Sugar fermentation stimulation protein, C-terminal IF561_00300 IPR011545 DEAD/DEAH box helicase domain IF561_00300 IPR007502 Helicase-associated domain IF561_00300 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_00300 IPR001650 Helicase, C-terminal IF561_00300 IPR010225 ATP-dependent helicase HrpB IF561_00300 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal IF561_00300 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00305 IPR023346 Lysozyme-like domain superfamily IF561_00305 IPR011813 Penicillin-binding protein 1B IF561_00305 IPR036950 Penicillin binding protein transglycosylase domain IF561_00305 IPR001460 Penicillin-binding protein, transpeptidase IF561_00305 IPR012338 Beta-lactamase/transpeptidase-like IF561_00305 IPR001264 Glycosyl transferase, family 51 IF561_00305 IPR028166 Bifunctional transglycosylase second domain IF561_00310 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_00310 IPR001423 Lysophospholipase patatin, conserved site IF561_00310 IPR002641 Patatin-like phospholipase domain IF561_00315 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IF561_00315 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IF561_00315 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IF561_00315 IPR015932 Aconitase, domain 2 IF561_00315 IPR015929 Aconitase B, swivel IF561_00315 IPR036288 Aconitase B, HEAT-like domain superfamily IF561_00315 IPR015933 Aconitase B, HEAT-like domain IF561_00315 IPR036008 Aconitase, iron-sulfur domain IF561_00315 IPR018136 Aconitase family, 4Fe-4S cluster binding site IF561_00315 IPR004406 Aconitase B IF561_00320 IPR008249 Uncharacterised protein family UPF0231 IF561_00325 IPR017918 Nitrogen regulatory protein PII, conserved site IF561_00325 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IF561_00325 IPR011322 Nitrogen regulatory PII-like, alpha/beta IF561_00325 IPR002187 Nitrogen regulatory protein PII IF561_00325 IPR002332 Nitrogen regulatory protein P-II, urydylation site IF561_00330 IPR024041 Ammonium transporter AmtB-like domain IF561_00330 IPR001905 Ammonium transporter IF561_00330 IPR018047 Ammonium transporter, conserved site IF561_00330 IPR029020 Ammonium/urea transporter IF561_00335 IPR026045 Ferric binding protein IF561_00335 IPR006059 Bacterial extracellular solute-binding protein IF561_00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00345 IPR013611 Transport-associated OB, type 2 IF561_00345 IPR003593 AAA+ ATPase domain IF561_00345 IPR003439 ABC transporter-like IF561_00345 IPR017871 ABC transporter, conserved site IF561_00345 IPR008995 Molybdate/tungstate binding, C-terminal IF561_00345 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA IF561_00350 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IF561_00350 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IF561_00350 IPR005843 Alpha-D-phosphohexomutase, C-terminal IF561_00350 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IF561_00350 IPR016066 Alpha-D-phosphohexomutase, conserved site IF561_00350 IPR005841 Alpha-D-phosphohexomutase superfamily IF561_00350 IPR006352 Phosphoglucosamine mutase, bacterial type IF561_00350 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IF561_00350 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IF561_00355 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily IF561_00355 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal IF561_00355 IPR033432 Glycosyl hydrolase 36, catalytic domain IF561_00355 IPR011013 Galactose mutarotase-like domain superfamily IF561_00355 IPR009342 Putative carbohydrate binding domain IF561_00355 IPR012341 Six-hairpin glycosidase-like superfamily IF561_00355 IPR008928 Six-hairpin glycosidase superfamily IF561_00355 IPR010383 Glycosyl hydrolase 94 IF561_00360 IPR029018 Beta-hexosaminidase-like, domain 2 IF561_00360 IPR017853 Glycoside hydrolase superfamily IF561_00360 IPR015883 Glycoside hydrolase family 20, catalytic domain IF561_00360 IPR025705 Beta-hexosaminidase IF561_00360 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal IF561_00365 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type IF561_00375 IPR003593 AAA+ ATPase domain IF561_00375 IPR003439 ABC transporter-like IF561_00375 IPR017871 ABC transporter, conserved site IF561_00375 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00380 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_00380 IPR017871 ABC transporter, conserved site IF561_00380 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00380 IPR003593 AAA+ ATPase domain IF561_00380 IPR003439 ABC transporter-like IF561_00385 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_00385 IPR035906 MetI-like superfamily IF561_00385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_00390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_00390 IPR035906 MetI-like superfamily IF561_00395 IPR039424 Solute-binding protein family 5 IF561_00395 IPR030678 Peptide/nickel binding protein, MppA-type IF561_00395 IPR000914 Solute-binding protein family 5 domain IF561_00395 IPR023765 Solute-binding protein family 5, conserved site IF561_00400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_00400 IPR011006 CheY-like superfamily IF561_00400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_00400 IPR005467 Histidine kinase domain IF561_00400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_00400 IPR003594 Histidine kinase/HSP90-like ATPase IF561_00400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_00400 IPR036641 HPT domain superfamily IF561_00400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_00400 IPR001789 Signal transduction response regulator, receiver domain IF561_00400 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_00405 IPR013675 Methyltransferase small, N-terminal IF561_00405 IPR023543 rRNA small subunit methyltransferase C IF561_00405 IPR007848 Methyltransferase small domain IF561_00405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_00405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_00410 IPR002549 Transmembrane protein TqsA-like IF561_00420 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase IF561_00420 IPR005814 Aminotransferase class-III IF561_00420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_00420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_00420 IPR015424 Pyridoxal phosphate-dependent transferase IF561_00425 IPR000361 FeS cluster biogenesis IF561_00425 IPR016092 FeS cluster insertion protein IF561_00425 IPR017870 FeS cluster insertion, C-terminal, conserved site IF561_00425 IPR023063 FeS cluster insertion protein ErpA IF561_00425 IPR035903 HesB-like domain superfamily IF561_00435 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_00435 IPR001036 Acriflavin resistance protein IF561_00435 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IF561_00440 IPR018392 LysM domain IF561_00440 IPR013731 Opacity-associated protein A, N-terminal IF561_00440 IPR016047 Peptidase M23 IF561_00440 IPR011055 Duplicated hybrid motif IF561_00445 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 IF561_00445 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_00445 IPR002305 Aminoacyl-tRNA synthetase, class Ic IF561_00445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_00445 IPR002942 RNA-binding S4 domain IF561_00445 IPR002307 Tyrosine-tRNA ligase IF561_00445 IPR036986 RNA-binding S4 domain superfamily IF561_00445 IPR024088 Tyrosine-tRNA ligase, bacterial-type IF561_00455 IPR012338 Beta-lactamase/transpeptidase-like IF561_00455 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C IF561_00460 IPR033900 Porin domain, Gram-negative type IF561_00460 IPR023614 Porin domain superfamily IF561_00465 IPR023459 Transcription elongation factor GreA/GreB family IF561_00465 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IF561_00465 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IF561_00465 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IF561_00465 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IF561_00465 IPR006359 Transcription elongation factor GreA IF561_00465 IPR028624 Transcription elongation factor GreA/GreB IF561_00465 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IF561_00470 IPR035920 YhbY-like superfamily IF561_00470 IPR001890 RNA-binding, CRM domain IF561_00470 IPR017924 RNA-binding protein YhbY IF561_00475 IPR015507 Ribosomal RNA large subunit methyltransferase E IF561_00475 IPR002877 Ribosomal RNA methyltransferase FtsJ domain IF561_00475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_00480 IPR003593 AAA+ ATPase domain IF561_00480 IPR041569 AAA ATPase, AAA+ lid domain IF561_00480 IPR003959 ATPase, AAA-type, core IF561_00480 IPR005936 Peptidase, FtsH IF561_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00480 IPR011546 Peptidase M41, FtsH extracellular IF561_00480 IPR003960 ATPase, AAA-type, conserved site IF561_00480 IPR000642 Peptidase M41 IF561_00480 IPR037219 Peptidase M41-like IF561_00485 IPR000489 Pterin-binding domain IF561_00485 IPR006390 Dihydropteroate synthase IF561_00485 IPR011005 Dihydropteroate synthase-like IF561_00490 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IF561_00490 IPR006352 Phosphoglucosamine mutase, bacterial type IF561_00490 IPR005841 Alpha-D-phosphohexomutase superfamily IF561_00490 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IF561_00490 IPR016066 Alpha-D-phosphohexomutase, conserved site IF561_00490 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IF561_00490 IPR005843 Alpha-D-phosphohexomutase, C-terminal IF561_00490 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IF561_00490 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IF561_00495 IPR004692 Preprotein translocase SecG subunit IF561_00510 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily IF561_00510 IPR028989 Ribosome maturation factor RimP, N-terminal IF561_00510 IPR035956 RimP, N-terminal domain superfamily IF561_00510 IPR003728 Ribosome maturation factor RimP IF561_00510 IPR028998 Ribosome maturation factor RimP, C-terminal IF561_00515 IPR015946 K homology domain-like, alpha/beta IF561_00515 IPR025249 KH domain, NusA-like IF561_00515 IPR009019 K homology domain superfamily, prokaryotic type IF561_00515 IPR012340 Nucleic acid-binding, OB-fold IF561_00515 IPR030842 Transcription termination/antitermination protein NusA, bacterial IF561_00515 IPR036555 NusA, N-terminal domain superfamily IF561_00515 IPR022967 RNA-binding domain, S1 IF561_00515 IPR003029 S1 domain IF561_00515 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical IF561_00515 IPR010214 Transcription termination factor NusA, C-terminal duplication IF561_00515 IPR010213 Transcription termination factor NusA IF561_00515 IPR013735 Transcription factor NusA, N-terminal IF561_00520 IPR009061 Putative DNA-binding domain superfamily IF561_00520 IPR013575 Initiation factor 2 associated domain, bacterial IF561_00520 IPR006847 Translation initiation factor IF-2, N-terminal IF561_00520 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00520 IPR005225 Small GTP-binding protein domain IF561_00520 IPR000795 Transcription factor, GTP-binding domain IF561_00520 IPR000178 Translation initiation factor aIF-2, bacterial-like IF561_00520 IPR015760 Translation initiation factor IF- 2 IF561_00520 IPR023115 Translation initiation factor IF- 2, domain 3 IF561_00520 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IF561_00520 IPR009000 Translation protein, beta-barrel domain superfamily IF561_00525 IPR023799 Ribosome-binding factor A domain superfamily IF561_00525 IPR000238 Ribosome-binding factor A IF561_00525 IPR015946 K homology domain-like, alpha/beta IF561_00525 IPR020053 Ribosome-binding factor A, conserved site IF561_00530 IPR002501 Pseudouridine synthase II, N-terminal IF561_00530 IPR015947 PUA-like superfamily IF561_00530 IPR036974 PUA domain superfamily IF561_00530 IPR014780 tRNA pseudouridine synthase II, TruB IF561_00530 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_00530 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal IF561_00530 IPR032819 tRNA pseudouridylate synthase B, C-terminal IF561_00535 IPR000589 Ribosomal protein S15 IF561_00535 IPR005290 Ribosomal protein S15, bacterial-type IF561_00535 IPR009068 S15/NS1, RNA-binding IF561_00540 IPR003029 S1 domain IF561_00540 IPR015847 Exoribonuclease, phosphorolytic domain 2 IF561_00540 IPR001247 Exoribonuclease, phosphorolytic domain 1 IF561_00540 IPR004087 K Homology domain IF561_00540 IPR004088 K Homology domain, type 1 IF561_00540 IPR036612 K Homology domain, type 1 superfamily IF561_00540 IPR012340 Nucleic acid-binding, OB-fold IF561_00540 IPR027408 PNPase/RNase PH domain superfamily IF561_00540 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain IF561_00540 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_00540 IPR022967 RNA-binding domain, S1 IF561_00540 IPR036345 Exoribonuclease, PH domain 2 superfamily IF561_00540 IPR012162 Polyribonucleotide nucleotidyltransferase IF561_00545 IPR023605 Lipoprotein NlpI IF561_00545 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_00545 IPR013026 Tetratricopeptide repeat-containing domain IF561_00545 IPR013105 Tetratricopeptide repeat 2 IF561_00545 IPR019734 Tetratricopeptide repeat IF561_00555 IPR002528 Multi antimicrobial extrusion protein IF561_00560 IPR001539 Peptidase U32 IF561_00565 IPR036206 Thiamin phosphate synthase superfamily IF561_00565 IPR001539 Peptidase U32 IF561_00570 IPR001633 EAL domain IF561_00570 IPR035919 EAL domain superfamily IF561_00570 IPR000160 GGDEF domain IF561_00570 IPR005330 MHYT domain IF561_00570 IPR029787 Nucleotide cyclase IF561_00575 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT IF561_00575 IPR036527 SCP2 sterol-binding domain superfamily IF561_00575 IPR003033 SCP2 sterol-binding domain IF561_00575 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 IF561_00580 IPR016181 Acyl-CoA N-acyltransferase IF561_00580 IPR000182 GNAT domain IF561_00600 IPR009000 Translation protein, beta-barrel domain superfamily IF561_00600 IPR005225 Small GTP-binding protein domain IF561_00600 IPR041732 Peptide chain release factor 3, GTP-binding domain IF561_00600 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily IF561_00600 IPR032090 Peptide chain release factor 3, C-terminal IF561_00600 IPR000795 Transcription factor, GTP-binding domain IF561_00600 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00600 IPR031157 Tr-type G domain, conserved site IF561_00600 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_00600 IPR035647 EF-G domain III/V-like IF561_00600 IPR004548 Peptide chain release factor 3 IF561_00610 IPR001130 TatD family IF561_00610 IPR032466 Metal-dependent hydrolase IF561_00610 IPR018228 Deoxyribonuclease, TatD-related, conserved site IF561_00615 IPR008276 Concentrative nucleoside transporter IF561_00615 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial IF561_00615 IPR011657 Concentrative nucleoside transporter C-terminal domain IF561_00615 IPR002668 Concentrative nucleoside transporter N-terminal domain IF561_00615 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_00620 IPR023649 Deoxyribose-phosphate aldolase type II IF561_00620 IPR013785 Aldolase-type TIM barrel IF561_00620 IPR011343 Deoxyribose-phosphate aldolase IF561_00620 IPR002915 DeoC/FbaB/ lacD aldolase IF561_00625 IPR013465 Thymidine phosphorylase IF561_00625 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IF561_00625 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily IF561_00625 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal IF561_00625 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic IF561_00625 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site IF561_00625 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase IF561_00625 IPR000312 Glycosyl transferase, family 3 IF561_00625 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IF561_00625 IPR017459 Glycosyl transferase family 3, N-terminal domain IF561_00630 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_00630 IPR010045 Phosphopentomutase IF561_00630 IPR006124 Metalloenzyme IF561_00630 IPR024052 Phosphopentomutase DeoB cap domain superfamily IF561_00635 IPR004402 Purine nucleoside phosphorylase DeoD-type IF561_00635 IPR000845 Nucleoside phosphorylase domain IF561_00635 IPR035994 Nucleoside phosphorylase superfamily IF561_00635 IPR018016 Nucleoside phosphorylase, conserved site IF561_00645 IPR036412 HAD-like superfamily IF561_00645 IPR023214 HAD superfamily IF561_00645 IPR041449 Phosphoserine phosphatase, N-terminal IF561_00645 IPR023190 Phosphoserine phosphatase, domain 2 IF561_00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00655 IPR004504 DNA repair protein RadA IF561_00655 IPR003593 AAA+ ATPase domain IF561_00655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_00655 IPR041166 LapB, rubredoxin metal binding domain IF561_00655 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_00655 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IF561_00660 IPR005225 Small GTP-binding protein domain IF561_00660 IPR000795 Transcription factor, GTP-binding domain IF561_00660 IPR009000 Translation protein, beta-barrel domain superfamily IF561_00660 IPR004540 Translation elongation factor EFG/EF2 IF561_00660 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_00660 IPR041095 Elongation Factor G, domain II IF561_00660 IPR009022 Elongation factor G, domain III IF561_00660 IPR035647 EF-G domain III/V-like IF561_00660 IPR035649 EFG, domain V IF561_00660 IPR000640 Elongation factor EFG, domain V-like IF561_00660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_00660 IPR031157 Tr-type G domain, conserved site IF561_00660 IPR005517 Translation elongation factor EFG/EF2, domain IV IF561_00660 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00660 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_00665 IPR000847 Transcription regulator HTH, LysR IF561_00665 IPR005119 LysR, substrate-binding IF561_00665 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00665 IPR036390 Winged helix DNA-binding domain superfamily IF561_00675 IPR020845 AMP-binding, conserved site IF561_00675 IPR000873 AMP-dependent synthetase/ligase IF561_00675 IPR042099 AMP-dependent synthetase-like superfamily IF561_00680 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA IF561_00680 IPR018062 HTH domain AraC-type, conserved site IF561_00680 IPR018060 DNA binding HTH domain, AraC-type IF561_00680 IPR004026 Ada DNA repair, metal-binding IF561_00680 IPR035451 Ada-like domain superfamily IF561_00680 IPR009057 Homeobox-like domain superfamily IF561_00705 IPR004846 Type II/III secretion system IF561_00705 IPR007055 BON domain IF561_00705 IPR001775 GspD/PilQ family IF561_00705 IPR032789 Pilus formation protein, N-terminal IF561_00705 IPR014004 Transport-associated and nodulation domain, bacteria IF561_00735 IPR022399 Helicase/secretion neighbourhood ATPase IF561_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00735 IPR001482 Type II/IV secretion system protein IF561_00765 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00765 IPR000847 Transcription regulator HTH, LysR IF561_00765 IPR005119 LysR, substrate-binding IF561_00765 IPR036390 Winged helix DNA-binding domain superfamily IF561_00770 IPR002293 Amino acid/polyamine transporter I IF561_00775 IPR004375 YhcH/YjgK/YiaL family IF561_00775 IPR037012 YhcH/YjgK/YiaL superfamily IF561_00780 IPR013783 Immunoglobulin-like fold IF561_00780 IPR023232 Glycoside hydrolase, family 2, active site IF561_00780 IPR006103 Glycoside hydrolase family 2, catalytic domain IF561_00780 IPR006104 Glycosyl hydrolases family 2, sugar binding domain IF561_00780 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich IF561_00780 IPR023230 Glycoside hydrolase, family 2, conserved site IF561_00780 IPR017853 Glycoside hydrolase superfamily IF561_00780 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase IF561_00780 IPR032312 Beta-galactosidase, domain 4 IF561_00780 IPR006101 Glycoside hydrolase, family 2 IF561_00780 IPR008979 Galactose-binding-like domain superfamily IF561_00780 IPR004199 Beta galactosidase small chain/ domain 5 IF561_00780 IPR014718 Glycoside hydrolase-type carbohydrate-binding IF561_00780 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily IF561_00780 IPR011013 Galactose mutarotase-like domain superfamily IF561_00785 IPR000843 LacI-type HTH domain IF561_00785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_00785 IPR028082 Periplasmic binding protein-like I IF561_00790 IPR016040 NAD(P)-binding domain IF561_00790 IPR036291 NAD(P)-binding domain superfamily IF561_00790 IPR005886 UDP-glucose 4-epimerase IF561_00795 IPR036265 HIT-like superfamily IF561_00795 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal IF561_00795 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal IF561_00795 IPR001937 Galactose-1-phosphate uridyl transferase, class I IF561_00795 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site IF561_00800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_00800 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_00800 IPR006206 Mevalonate/galactokinase IF561_00800 IPR006203 GHMP kinase, ATP-binding, conserved site IF561_00800 IPR006204 GHMP kinase N-terminal domain IF561_00800 IPR036554 GHMP kinase, C-terminal domain superfamily IF561_00800 IPR019539 Galactokinase galactose-binding domain IF561_00800 IPR019741 Galactokinase, conserved site IF561_00800 IPR022963 Galactokinase, bacterial IF561_00800 IPR000705 Galactokinase IF561_00800 IPR013750 GHMP kinase, C-terminal domain IF561_00805 IPR011013 Galactose mutarotase-like domain superfamily IF561_00805 IPR014718 Glycoside hydrolase-type carbohydrate-binding IF561_00805 IPR018052 Aldose 1-epimerase, conserved site IF561_00805 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase IF561_00805 IPR015443 Aldose 1-epimerase IF561_00805 IPR013458 Aldose 1-epimerase, bacterial IF561_00810 IPR028082 Periplasmic binding protein-like I IF561_00810 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_00810 IPR000843 LacI-type HTH domain IF561_00810 IPR023588 Transcription regulator HTH, PurR IF561_00820 IPR039672 Lactose permease-like IF561_00820 IPR020846 Major facilitator superfamily domain IF561_00820 IPR036259 MFS transporter superfamily IF561_00820 IPR001927 Sodium:galactoside symporter IF561_00820 IPR018043 Sodium:galactoside symporter, conserved site IF561_00825 IPR000843 LacI-type HTH domain IF561_00825 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_00825 IPR028082 Periplasmic binding protein-like I IF561_00830 IPR002547 tRNA-binding domain IF561_00830 IPR012340 Nucleic acid-binding, OB-fold IF561_00850 IPR023714 Zinc transport protein ZntB IF561_00850 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB IF561_00855 IPR031656 Alpha-glycerophosphate oxidase, C-terminal IF561_00855 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_00855 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase IF561_00855 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily IF561_00855 IPR006076 FAD dependent oxidoreductase IF561_00860 IPR036390 Winged helix DNA-binding domain superfamily IF561_00860 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00860 IPR018356 Transcription regulator, HTH DeoR-type, conserved site IF561_00860 IPR037171 NagB/RpiA transferase-like IF561_00860 IPR001034 DeoR-type HTH domain IF561_00860 IPR014036 DeoR C-terminal sensor domain IF561_00865 IPR018485 Carbohydrate kinase, FGGY, C-terminal IF561_00865 IPR018483 Carbohydrate kinase, FGGY, conserved site IF561_00865 IPR018484 Carbohydrate kinase, FGGY, N-terminal IF561_00865 IPR005999 Glycerol kinase IF561_00865 IPR000577 Carbohydrate kinase, FGGY IF561_00870 IPR023271 Aquaporin-like IF561_00870 IPR000425 Major intrinsic protein IF561_00870 IPR022357 Major intrinsic protein, conserved site IF561_00875 IPR005267 Glycerol-3-phosphate transporter IF561_00875 IPR000849 Sugar phosphate transporter IF561_00875 IPR021159 Glycerate/sugar phosphate transporter, conserved site IF561_00875 IPR036259 MFS transporter superfamily IF561_00875 IPR020846 Major facilitator superfamily domain IF561_00875 IPR011701 Major facilitator superfamily IF561_00880 IPR030395 Glycerophosphodiester phosphodiesterase domain IF561_00880 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily IF561_00885 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria IF561_00885 IPR011004 Trimeric LpxA-like superfamily IF561_00885 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family IF561_00885 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain IF561_00885 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily IF561_00885 IPR001451 Hexapeptide repeat IF561_00890 IPR009813 Uncharacterised protein family YebG IF561_00890 IPR038627 YebG-like superfamily IF561_00895 IPR005119 LysR, substrate-binding IF561_00895 IPR000847 Transcription regulator HTH, LysR IF561_00895 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_00895 IPR036390 Winged helix DNA-binding domain superfamily IF561_00905 IPR024588 Inner membrane protein YejM, N-terminal IF561_00905 IPR000917 Sulfatase, N-terminal IF561_00905 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_00905 IPR012159 Inner membrane protein YejM IF561_00910 IPR013986 DExx box DNA helicase domain superfamily IF561_00910 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00910 IPR006697 RecBCD enzyme subunit RecC IF561_00910 IPR041500 RecC, C-terminal IF561_00910 IPR011335 Restriction endonuclease type II-like IF561_00915 IPR014016 UvrD-like helicase, ATP-binding domain IF561_00915 IPR011335 Restriction endonuclease type II-like IF561_00915 IPR004586 RecBCD enzyme subunit RecB IF561_00915 IPR034739 UvrD/AddA helicase, N-terminal IF561_00915 IPR011604 Exonuclease, phage-type/RecB, C-terminal IF561_00915 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IF561_00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00915 IPR014017 UvrD-like DNA helicase, C-terminal IF561_00915 IPR000212 DNA helicase, UvrD/REP type IF561_00920 IPR003593 AAA+ ATPase domain IF561_00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_00920 IPR006344 RecBCD enzyme subunit RecD IF561_00920 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain IF561_00920 IPR027785 UvrD-like helicase C-terminal domain IF561_00930 IPR033719 N-acetylglutamate synthase, kinase-like domain IF561_00930 IPR010167 Amino-acid N-acetyltransferase IF561_00930 IPR001048 Aspartate/glutamate/uridylate kinase IF561_00930 IPR016181 Acyl-CoA N-acyltransferase IF561_00930 IPR036393 Acetylglutamate kinase-like superfamily IF561_00930 IPR000182 GNAT domain IF561_00940 IPR026044 Membrane-bound lytic murein transglycosylase A IF561_00940 IPR034654 MltA, 3D domain IF561_00940 IPR005300 Lytic transglycosylase MltA, domain B IF561_00940 IPR036908 RlpA-like domain superfamily IF561_00940 IPR010611 3D domain IF561_00945 IPR000594 THIF-type NAD/FAD binding fold IF561_00945 IPR035985 Ubiquitin-activating enzyme IF561_00950 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE IF561_00950 IPR003808 Fe-S metabolism associated domain, SufE-like IF561_00955 IPR000160 GGDEF domain IF561_00955 IPR033424 Membrane-associated sensor domain IF561_00955 IPR029787 Nucleotide cyclase IF561_00960 IPR000192 Aminotransferase class V domain IF561_00960 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA IF561_00960 IPR010970 Cysteine desulfurase, SufS IF561_00960 IPR016454 Cysteine desulfurase IF561_00960 IPR015424 Pyridoxal phosphate-dependent transferase IF561_00960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_00960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_00965 IPR029062 Class I glutamine amidotransferase-like IF561_00965 IPR006287 Protein/nucleic acid deglycase DJ-1 IF561_00965 IPR002818 DJ-1/PfpI IF561_00970 IPR013332 Ketopantoate reductase, N-terminal domain IF561_00970 IPR013752 Ketopantoate reductase, C-terminal domain IF561_00970 IPR036291 NAD(P)-binding domain superfamily IF561_00970 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_00970 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_00970 IPR003710 Ketopantoate reductase ApbA/PanE IF561_00975 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like IF561_00975 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily IF561_00995 IPR039425 RNA polymerase sigma-70 like IF561_00995 IPR014284 RNA polymerase sigma-70 like domain IF561_00995 IPR007627 RNA polymerase sigma-70 region 2 IF561_00995 IPR007630 RNA polymerase sigma-70 region 4 IF561_00995 IPR013325 RNA polymerase sigma factor, region 2 IF561_00995 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_00995 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_01005 IPR020846 Major facilitator superfamily domain IF561_01005 IPR036259 MFS transporter superfamily IF561_01005 IPR011701 Major facilitator superfamily IF561_01005 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 IF561_01010 IPR029000 Cyclophilin-like domain superfamily IF561_01010 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain IF561_01010 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site IF561_01015 IPR012640 Membrane lipoprotein, lipid attachment site IF561_01015 IPR005619 Uncharacterised protein family, YajG IF561_01020 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD IF561_01020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_01020 IPR007848 Methyltransferase small domain IF561_01025 IPR002634 BolA protein IF561_01025 IPR036065 BolA-like superfamily IF561_01030 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A IF561_01030 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain IF561_01035 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B IF561_01035 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD IF561_01040 IPR007329 FMN-binding IF561_01040 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C IF561_01045 IPR003667 NqrDE/RnfAE IF561_01045 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D IF561_01050 IPR003667 NqrDE/RnfAE IF561_01050 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E IF561_01055 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_01055 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_01055 IPR012675 Beta-grasp domain superfamily IF561_01055 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain IF561_01055 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_01055 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IF561_01055 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_01055 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F IF561_01055 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_01055 IPR017938 Riboflavin synthase-like beta-barrel IF561_01060 IPR003374 ApbE-like superfamily IF561_01060 IPR042159 Flavin-trafficking protein ApbE IF561_01060 IPR024932 Flavin transferase ApbE IF561_01075 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IF561_01075 IPR017961 DNA polymerase, Y-family, little finger domain IF561_01075 IPR022880 DNA polymerase IV IF561_01075 IPR024728 DNA polymerase type-Y, HhH motif IF561_01075 IPR001126 UmuC domain IF561_01080 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_01080 IPR018982 RQC domain IF561_01080 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain IF561_01080 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01080 IPR002121 HRDC domain IF561_01080 IPR010997 HRDC-like superfamily IF561_01080 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_01080 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial IF561_01080 IPR004589 DNA helicase, ATP-dependent, RecQ type IF561_01080 IPR011545 DEAD/DEAH box helicase domain IF561_01080 IPR001650 Helicase, C-terminal IF561_01085 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IF561_01085 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IF561_01085 IPR006359 Transcription elongation factor GreA IF561_01085 IPR028624 Transcription elongation factor GreA/GreB IF561_01085 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IF561_01085 IPR023459 Transcription elongation factor GreA/GreB family IF561_01085 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IF561_01085 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IF561_01100 IPR000175 Sodium:neurotransmitter symporter IF561_01100 IPR037272 Sodium:neurotransmitter symporter superfamily IF561_01110 IPR009624 Uncharacterised protein family UPF0253 IF561_01120 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain IF561_01120 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily IF561_01120 IPR033730 Prokaryote proline-tRNA ligase core domain IF561_01120 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type IF561_01120 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 IF561_01120 IPR036621 Anticodon-binding domain superfamily IF561_01120 IPR004154 Anticodon-binding IF561_01120 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_01120 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IF561_01120 IPR002316 Proline-tRNA ligase, class IIa IF561_01125 IPR023370 TrmO-like, N-terminal domain IF561_01125 IPR041369 TrmO, C-terminal IF561_01125 IPR023368 Uncharacterised protein family UPF0066, conserved site IF561_01125 IPR040372 YaeB-like IF561_01125 IPR036413 YaeB-like superfamily IF561_01125 IPR036414 YaeB, N-terminal domain superfamily IF561_01130 IPR027493 Ribosomal protein L31 type B IF561_01130 IPR002150 Ribosomal protein L31 IF561_01130 IPR042105 Ribosomal protein L31 superfamily IF561_01130 IPR034704 L28p-like IF561_01135 IPR035977 Ribosomal protein L36 superfamily IF561_01135 IPR000473 Ribosomal protein L36 IF561_01140 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT IF561_01140 IPR011540 AbgT, Proteobacteria IF561_01145 IPR003791 Protein of unknown function UPF0178 IF561_01170 IPR007384 Protein of unknown function UCP006257 IF561_01170 IPR036814 YqcC-like superfamily IF561_01170 IPR023376 YqcC-like domain IF561_01175 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_01175 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_01175 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_01180 IPR020911 Uncharacterised protein family UPF0325 IF561_01185 IPR003607 HD/PDEase domain IF561_01185 IPR006674 HD domain IF561_01185 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase IF561_01185 IPR002934 Polymerase, nucleotidyl transferase domain IF561_01185 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme IF561_01185 IPR002912 ACT domain IF561_01190 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 IF561_01190 IPR036005 Creatinase/aminopeptidase-like IF561_01190 IPR001714 Peptidase M24, methionine aminopeptidase IF561_01190 IPR000994 Peptidase M24 IF561_01195 IPR001865 Ribosomal protein S2 IF561_01195 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid IF561_01195 IPR018130 Ribosomal protein S2, conserved site IF561_01195 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IF561_01200 IPR009060 UBA-like superfamily IF561_01200 IPR018101 Translation elongation factor Ts, conserved site IF561_01200 IPR001816 Translation elongation factor EFTs/EF1B IF561_01200 IPR036402 Elongation factor Ts, dimerisation domain superfamily IF561_01200 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation IF561_01205 IPR036393 Acetylglutamate kinase-like superfamily IF561_01205 IPR001048 Aspartate/glutamate/uridylate kinase IF561_01205 IPR011817 Uridylate kinase IF561_01205 IPR015963 Uridylate kinase, bacteria IF561_01210 IPR002661 Ribosome recycling factor IF561_01210 IPR023584 Ribosome recycling factor domain IF561_01210 IPR036191 RRF superfamily IF561_01215 IPR001441 Decaprenyl diphosphate synthase-like IF561_01215 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site IF561_01215 IPR036424 Decaprenyl diphosphate synthase-like superfamily IF561_01220 IPR000374 Phosphatidate cytidylyltransferase IF561_01225 IPR036291 NAD(P)-binding domain superfamily IF561_01225 IPR036169 DXP reductoisomerase, C-terminal domain superfamily IF561_01225 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal IF561_01225 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase IF561_01225 IPR026877 DXP reductoisomerase C-terminal domain IF561_01225 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal IF561_01230 IPR001478 PDZ domain IF561_01230 IPR041489 PDZ domain 6 IF561_01230 IPR036034 PDZ superfamily IF561_01230 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IF561_01230 IPR008915 Peptidase M50 IF561_01235 IPR034746 POTRA domain IF561_01235 IPR023707 Outer membrane protein assembly factor BamA IF561_01235 IPR039910 Surface antigen D15-like IF561_01235 IPR010827 POTRA domain, BamA/TamA-like IF561_01235 IPR000184 Bacterial surface antigen (D15) IF561_01240 IPR005632 Chaperone protein Skp IF561_01240 IPR024930 Skp domain superfamily IF561_01245 IPR011004 Trimeric LpxA-like superfamily IF561_01245 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region IF561_01245 IPR001451 Hexapeptide repeat IF561_01245 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD IF561_01250 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IF561_01250 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IF561_01250 IPR029069 HotDog domain superfamily IF561_01255 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal IF561_01255 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily IF561_01255 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase IF561_01255 IPR001451 Hexapeptide repeat IF561_01255 IPR011004 Trimeric LpxA-like superfamily IF561_01260 IPR003835 Glycosyl transferase, family 19 IF561_01265 IPR022898 Ribonuclease HII IF561_01265 IPR001352 Ribonuclease HII/HIII IF561_01265 IPR024567 Ribonuclease HII/HIII domain IF561_01265 IPR012337 Ribonuclease H-like superfamily IF561_01265 IPR036397 Ribonuclease H superfamily IF561_01270 IPR029460 DNA polymerase, helix-hairpin-helix motif IF561_01270 IPR004805 DNA polymerase III, alpha subunit IF561_01270 IPR016195 Polymerase/histidinol phosphatase-like IF561_01270 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_01270 IPR004013 PHP domain IF561_01270 IPR040982 DNA polymerase III alpha subunit finger domain IF561_01270 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain IF561_01270 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IF561_01270 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_01275 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IF561_01275 IPR001095 Acetyl-CoA carboxylase, alpha subunit IF561_01275 IPR029045 ClpP/crotonase-like domain superfamily IF561_01280 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain IF561_01280 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal IF561_01280 IPR012094 tRNA(Ile)-lysidine synthase IF561_01280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_01280 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal IF561_01280 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal IF561_01285 IPR009056 Cytochrome c-like domain IF561_01285 IPR036909 Cytochrome c-like domain superfamily IF561_01285 IPR008168 Cytochrome c, class IC IF561_01290 IPR017918 Nitrogen regulatory protein PII, conserved site IF561_01290 IPR002187 Nitrogen regulatory protein PII IF561_01290 IPR011322 Nitrogen regulatory PII-like, alpha/beta IF561_01290 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IF561_01290 IPR002332 Nitrogen regulatory protein P-II, urydylation site IF561_01295 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IF561_01295 IPR005135 Endonuclease/exonuclease/phosphatase IF561_01295 IPR022958 Uncharacterised protein family UPF0294 IF561_01305 IPR023346 Lysozyme-like domain superfamily IF561_01305 IPR036779 LysM domain superfamily IF561_01305 IPR000189 Prokaryotic transglycosylase, active site IF561_01305 IPR018392 LysM domain IF561_01305 IPR008258 Transglycosylase SLT domain 1 IF561_01310 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IF561_01310 IPR001279 Metallo-beta-lactamase IF561_01310 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain IF561_01310 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain IF561_01310 IPR017782 Hydroxyacylglutathione hydrolase IF561_01315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_01315 IPR013216 Methyltransferase type 11 IF561_01315 IPR026669 Arsenite methyltransferase-like IF561_01320 IPR002156 Ribonuclease H domain IF561_01320 IPR012337 Ribonuclease H-like superfamily IF561_01320 IPR036397 Ribonuclease H superfamily IF561_01320 IPR022892 Ribonuclease HI IF561_01325 IPR006309 DNA polymerase 3, epsilon subunit IF561_01325 IPR036397 Ribonuclease H superfamily IF561_01325 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IF561_01325 IPR012337 Ribonuclease H-like superfamily IF561_01325 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_01340 IPR000182 GNAT domain IF561_01340 IPR016181 Acyl-CoA N-acyltransferase IF561_01340 IPR006464 N-acetyltransferase RimI/Ard1 IF561_01345 IPR011547 SLC26A/SulP transporter domain IF561_01345 IPR001902 SLC26A/SulP transporter IF561_01345 IPR002645 STAS domain IF561_01345 IPR036513 STAS domain superfamily IF561_01350 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_01350 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_01350 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_01350 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_01350 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type IF561_01350 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_01350 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_01355 IPR035461 GmhA/DiaA IF561_01355 IPR004515 Phosphoheptose isomerase IF561_01355 IPR001347 Sugar isomerase (SIS) IF561_01360 IPR017932 Glutamine amidotransferase type 2 domain IF561_01360 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_01360 IPR026869 Putative glutamine amidotransferase type 2 IF561_01365 IPR001555 Phosphoribosylglycinamide formyltransferase, active site IF561_01365 IPR002376 Formyl transferase, N-terminal IF561_01365 IPR036477 Formyl transferase, N-terminal domain superfamily IF561_01365 IPR004607 Phosphoribosylglycinamide formyltransferase IF561_01370 IPR010918 PurM-like, C-terminal domain IF561_01370 IPR036676 PurM-like, C-terminal domain superfamily IF561_01370 IPR016188 PurM-like, N-terminal domain IF561_01370 IPR036921 PurM-like, N-terminal domain superfamily IF561_01370 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase IF561_01375 IPR000836 Phosphoribosyltransferase domain IF561_01375 IPR034332 Uracil phosphoribosyltransferase, bacterial-type IF561_01375 IPR005765 Uracil phosphoribosyl transferase IF561_01375 IPR029057 Phosphoribosyltransferase-like IF561_01380 IPR029935 Uracil permease IF561_01380 IPR006042 Xanthine/uracil permease IF561_01380 IPR006043 Xanthine/uracil/vitamin C permease IF561_01395 IPR008254 Flavodoxin/nitric oxide synthase IF561_01395 IPR001226 Flavodoxin, conserved site IF561_01395 IPR029039 Flavoprotein-like superfamily IF561_01395 IPR005025 NADPH-dependent FMN reductase-like IF561_01395 IPR010089 Flavoprotein WrbA-like IF561_01400 IPR036249 Thioredoxin-like superfamily IF561_01400 IPR006660 Arsenate reductase-like IF561_01400 IPR006659 Arsenate reductase IF561_01405 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_01405 IPR013026 Tetratricopeptide repeat-containing domain IF561_01405 IPR030873 Beta-barrel assembly-enhancing protease IF561_01405 IPR001915 Peptidase M48 IF561_01405 IPR019734 Tetratricopeptide repeat IF561_01415 IPR002549 Transmembrane protein TqsA-like IF561_01420 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IF561_01420 IPR024706 Peroxiredoxin, AhpC-type IF561_01420 IPR036249 Thioredoxin-like superfamily IF561_01420 IPR013766 Thioredoxin domain IF561_01435 IPR000700 PAS-associated, C-terminal IF561_01435 IPR000014 PAS domain IF561_01435 IPR012226 Diguanylate cyclase/phosphodiesterase IF561_01435 IPR001633 EAL domain IF561_01435 IPR035919 EAL domain superfamily IF561_01435 IPR000160 GGDEF domain IF561_01435 IPR029787 Nucleotide cyclase IF561_01435 IPR035965 PAS domain superfamily IF561_01435 IPR001610 PAC motif IF561_01545 IPR042196 FHIPEP, domain 4 IF561_01545 IPR006302 Type III secretion protein HrcV IF561_01545 IPR001712 Type III secretion system FHIPEP IF561_01545 IPR025505 FHIPEP conserved site IF561_01545 IPR042193 FHIPEP, domain 3 IF561_01545 IPR042194 FHIPEP, domain 1 IF561_01550 IPR006307 Type III exporter system, secretion apparatus protein BsaZ IF561_01550 IPR006135 Type III secretion system substrate exporter IF561_01550 IPR029025 Type III secretion system substrate exporter, C-terminal IF561_01580 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_01580 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_01580 IPR039420 Transcriptional regulatory protein WalR-like IF561_01580 IPR016032 Signal transduction response regulator, C-terminal effector IF561_01595 IPR005773 Yop virulence translocation protein R IF561_01595 IPR005838 Type III secretion system inner membrane P protein IF561_01610 IPR038591 NolW-like superfamily IF561_01610 IPR005644 NolW-like IF561_01610 IPR004845 Type II secretion system GspD, conserved site IF561_01610 IPR003522 Type III secretion system outer membrane pore YscC/HrcC IF561_01610 IPR004846 Type II/III secretion system IF561_01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01615 IPR040627 T3SS EscN ATPase, C-terminal IF561_01615 IPR032463 ATPase, type III secretion system, FliI IF561_01615 IPR005714 ATPase, type III secretion system, FliI/YscN IF561_01615 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_01615 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_01615 IPR003593 AAA+ ATPase domain IF561_01615 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IF561_01670 IPR000620 EamA domain IF561_01685 IPR031161 Peptidase family M60 domain IF561_01685 IPR035423 M60-like domain, N-terminal IF561_01685 IPR025385 Domain of unknown function DUF4092 IF561_01685 IPR042279 Peptidase M60, enhancin-like domain 3 IF561_01690 IPR027454 Histone-like protein H-NS, N-terminal IF561_01690 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily IF561_01690 IPR027444 Histone-like protein H-NS, C-terminal domain IF561_01690 IPR001801 Histone-like protein H-NS IF561_01700 IPR038689 Thermostable direct haemolysin superfamily IF561_01700 IPR005015 Thermostable direct haemolysin, vibrio IF561_01705 IPR020449 Transcription regulator HTH, AraC- type IF561_01705 IPR009057 Homeobox-like domain superfamily IF561_01705 IPR018060 DNA binding HTH domain, AraC-type IF561_01705 IPR018062 HTH domain AraC-type, conserved site IF561_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01710 IPR003439 ABC transporter-like IF561_01710 IPR003593 AAA+ ATPase domain IF561_01715 IPR003593 AAA+ ATPase domain IF561_01715 IPR003439 ABC transporter-like IF561_01715 IPR017871 ABC transporter, conserved site IF561_01715 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_01715 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01720 IPR035906 MetI-like superfamily IF561_01720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_01720 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_01725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_01725 IPR035906 MetI-like superfamily IF561_01730 IPR000914 Solute-binding protein family 5 domain IF561_01730 IPR023765 Solute-binding protein family 5, conserved site IF561_01730 IPR039424 Solute-binding protein family 5 IF561_01730 IPR030678 Peptide/nickel binding protein, MppA-type IF561_01735 IPR002669 Urease accessory protein UreD IF561_01740 IPR012010 Urease, gamma subunit IF561_01740 IPR002026 Urease, gamma/gamma-beta subunit IF561_01740 IPR036463 Urease, gamma subunit superfamily IF561_01745 IPR002019 Urease, beta subunit IF561_01745 IPR036461 Urease, beta subunit superfamily IF561_01750 IPR005848 Urease, alpha subunit IF561_01750 IPR011059 Metal-dependent hydrolase, composite domain superfamily IF561_01750 IPR032466 Metal-dependent hydrolase IF561_01750 IPR011612 Urease alpha-subunit, N-terminal domain IF561_01750 IPR017950 Urease active site IF561_01750 IPR017951 Urease alpha subunit, C-terminal IF561_01750 IPR029754 Urease nickel binding site IF561_01750 IPR006680 Amidohydrolase-related IF561_01755 IPR012406 Urease accessory protein UreE IF561_01755 IPR007864 Urease accessory protein UreE, C-terminal domain IF561_01755 IPR036675 UreE, C-terminal domain superfamily IF561_01755 IPR004029 UreE urease accessory, N-terminal IF561_01755 IPR036118 UreE urease accessory, N-terminal domain superfamily IF561_01760 IPR002639 Urease accessory protein UreF IF561_01760 IPR038277 UreF domain superfamily IF561_01765 IPR004400 Urease accessory protein UreG IF561_01765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01765 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IF561_01820 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IF561_01820 IPR036249 Thioredoxin-like superfamily IF561_01820 IPR013766 Thioredoxin domain IF561_01850 IPR002912 ACT domain IF561_01850 IPR016867 Glycine cleavage system transcriptional repressor IF561_01855 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IF561_01855 IPR013785 Aldolase-type TIM barrel IF561_01855 IPR002220 DapA-like IF561_01855 IPR020625 Schiff base-forming aldolase, active site IF561_01855 IPR020624 Schiff base-forming aldolase, conserved site IF561_01860 IPR010653 NlpB/DapX lipoprotein IF561_01860 IPR014524 Outer membrane protein assembly factor BamC IF561_01860 IPR042268 Outer membrane protein assembly factor BamC, C-terminal IF561_01875 IPR002933 Peptidase M20 IF561_01875 IPR011650 Peptidase M20, dimerisation domain IF561_01875 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IF561_01875 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria IF561_01875 IPR036264 Bacterial exopeptidase dimerisation domain IF561_01880 IPR006504 Transcriptional regulator Spx/MgsR IF561_01880 IPR006660 Arsenate reductase-like IF561_01880 IPR036249 Thioredoxin-like superfamily IF561_01900 IPR021318 Protein of unknown function DUF2919 IF561_01905 IPR011008 Dimeric alpha-beta barrel IF561_01905 IPR006314 Dyp-type peroxidase IF561_01910 IPR001492 Flagellin IF561_01910 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_01910 IPR001029 Flagellin, D0/D1 domain IF561_01910 IPR010810 Flagellin hook, IN motif IF561_01915 IPR001029 Flagellin, D0/D1 domain IF561_01915 IPR010810 Flagellin hook, IN motif IF561_01915 IPR001492 Flagellin IF561_01915 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_01920 IPR001492 Flagellin IF561_01920 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_01920 IPR001029 Flagellin, D0/D1 domain IF561_01920 IPR010810 Flagellin hook, IN motif IF561_01925 IPR005186 FlaG protein IF561_01925 IPR035924 FlaG-like superfamily IF561_01930 IPR040026 Flagellar hook-associated protein 2 IF561_01930 IPR010810 Flagellin hook, IN motif IF561_01930 IPR003481 Flagellar hook-associated protein 2, N-terminal IF561_01930 IPR010809 Flagellar hook-associated protein 2, C-terminal IF561_01940 IPR036584 Flagellar protein FliS superfamily IF561_01940 IPR003713 Flagellar protein FliS IF561_01945 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_01945 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_01945 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_01945 IPR025944 Sigma-54 interaction domain, conserved site IF561_01945 IPR002197 DNA binding HTH domain, Fis-type IF561_01945 IPR009057 Homeobox-like domain superfamily IF561_01945 IPR010518 Flagellar regulatory FleQ IF561_01945 IPR011006 CheY-like superfamily IF561_01945 IPR003593 AAA+ ATPase domain IF561_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_01950 IPR035965 PAS domain superfamily IF561_01950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_01950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_01950 IPR003594 Histidine kinase/HSP90-like ATPase IF561_01950 IPR000014 PAS domain IF561_01950 IPR005467 Histidine kinase domain IF561_01950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_01955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01955 IPR001789 Signal transduction response regulator, receiver domain IF561_01955 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_01955 IPR009057 Homeobox-like domain superfamily IF561_01955 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_01955 IPR025944 Sigma-54 interaction domain, conserved site IF561_01955 IPR029995 Transcriptional activator SfnR/FlbD IF561_01955 IPR011006 CheY-like superfamily IF561_01955 IPR003593 AAA+ ATPase domain IF561_01955 IPR002197 DNA binding HTH domain, Fis-type IF561_01955 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_01960 IPR001624 Flagellar hook-basal body complex protein FliE IF561_01965 IPR013556 Flagellar M-ring C-terminal IF561_01965 IPR006182 Secretory protein YscJ/FliF IF561_01965 IPR000067 Flagellar M-ring protein FliF IF561_01970 IPR011002 Flagellar motor switch protein FliG, alpha-helical IF561_01970 IPR032779 Flagellar motor switch protein FliG, middle domain IF561_01970 IPR028263 Flagellar motor switch protein FliG, N-terminal domain IF561_01970 IPR000090 Flagellar motor switch protein FliG IF561_01970 IPR023087 Flagellar motor switch protein FliG, C-terminal IF561_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_01980 IPR040627 T3SS EscN ATPase, C-terminal IF561_01980 IPR020005 Flagellar export ATPase FliI, clade 1 IF561_01980 IPR003593 AAA+ ATPase domain IF561_01980 IPR032463 ATPase, type III secretion system, FliI IF561_01980 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_01980 IPR005714 ATPase, type III secretion system, FliI/YscN IF561_01980 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_02000 IPR028976 CheC-like superfamily IF561_02000 IPR001689 Flagellar motor switch protein FliM IF561_02000 IPR001543 Surface presentation of antigen (SpoA) IF561_02000 IPR036429 SpoA-like superfamily IF561_02005 IPR012826 Flagellar motor switch FliN IF561_02005 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb IF561_02005 IPR001543 Surface presentation of antigen (SpoA) IF561_02005 IPR036429 SpoA-like superfamily IF561_02010 IPR022781 Flagellar biosynthesis protein, FliO IF561_02015 IPR005837 Flagellar transport protein FliP IF561_02015 IPR005838 Type III secretion system inner membrane P protein IF561_02020 IPR006305 Flagellar biosynthesis protein FliQ IF561_02020 IPR002191 Bacterial export protein family 3 IF561_02025 IPR002010 Type III secretion system inner membrane R protein IF561_02025 IPR006303 Flagellar biosynthesis protein FliR IF561_02030 IPR006136 Flagellar biosynthetic protein FlhB IF561_02030 IPR006135 Type III secretion system substrate exporter IF561_02030 IPR029025 Type III secretion system substrate exporter, C-terminal IF561_02035 IPR042194 FHIPEP, domain 1 IF561_02035 IPR042193 FHIPEP, domain 3 IF561_02035 IPR042196 FHIPEP, domain 4 IF561_02035 IPR025505 FHIPEP conserved site IF561_02035 IPR006301 Flagellar biosynthesis protein FlhA IF561_02035 IPR001712 Type III secretion system FHIPEP IF561_02040 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IF561_02040 IPR020006 Flagellar biosynthesis protein FlhF IF561_02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02040 IPR003593 AAA+ ATPase domain IF561_02045 IPR025501 ATP binding protein MinD IF561_02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02045 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IF561_02050 IPR028617 RNA polymerase sigma factor FliA IF561_02050 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_02050 IPR013325 RNA polymerase sigma factor, region 2 IF561_02050 IPR007630 RNA polymerase sigma-70 region 4 IF561_02050 IPR007624 RNA polymerase sigma-70 region 3 IF561_02050 IPR007627 RNA polymerase sigma-70 region 2 IF561_02050 IPR000943 RNA polymerase sigma-70 IF561_02050 IPR012845 RNA polymerase sigma factor, FliA/WhiG IF561_02050 IPR014284 RNA polymerase sigma-70 like domain IF561_02055 IPR001789 Signal transduction response regulator, receiver domain IF561_02055 IPR011006 CheY-like superfamily IF561_02060 IPR007439 Chemotaxis phosphatase, CheZ IF561_02065 IPR004105 Histidine kinase CheA-like, homodimeric domain IF561_02065 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily IF561_02065 IPR036061 CheW-like domain superfamily IF561_02065 IPR011006 CheY-like superfamily IF561_02065 IPR003594 Histidine kinase/HSP90-like ATPase IF561_02065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_02065 IPR005467 Histidine kinase domain IF561_02065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_02065 IPR036641 HPT domain superfamily IF561_02065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_02065 IPR001789 Signal transduction response regulator, receiver domain IF561_02065 IPR002545 CheW-like domain IF561_02065 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_02070 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type IF561_02070 IPR035909 Methylesterase CheB, C-terminal IF561_02070 IPR011006 CheY-like superfamily IF561_02070 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase IF561_02070 IPR001789 Signal transduction response regulator, receiver domain IF561_02075 IPR025669 AAA domain IF561_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02085 IPR002545 CheW-like domain IF561_02085 IPR036061 CheW-like domain superfamily IF561_02085 IPR039315 Chemotaxis protein CheW IF561_02095 IPR017871 ABC transporter, conserved site IF561_02095 IPR005895 ABC transporter, haem export, CcmA IF561_02095 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02095 IPR003593 AAA+ ATPase domain IF561_02095 IPR003439 ABC transporter-like IF561_02100 IPR003544 Cytochrome c-type biogenesis protein CcmB IF561_02100 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria IF561_02105 IPR003557 Cytochrome c-type biogenesis protein CcmC IF561_02105 IPR002541 Cytochrome c assembly protein IF561_02110 IPR007078 Haem exporter protein D (CcmD) IF561_02115 IPR036127 CcmE-like superfamily IF561_02115 IPR004329 CcmE/CycJ protein IF561_02120 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal IF561_02120 IPR002541 Cytochrome c assembly protein IF561_02120 IPR003567 Cytochrome c-type biogenesis protein IF561_02120 IPR003568 Cytochrome c-type biogenesis protein CcmF IF561_02125 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE IF561_02125 IPR013740 Redoxin IF561_02125 IPR036249 Thioredoxin-like superfamily IF561_02125 IPR017937 Thioredoxin, conserved site IF561_02125 IPR013766 Thioredoxin domain IF561_02130 IPR019734 Tetratricopeptide repeat IF561_02130 IPR005616 CcmH/CycL/Ccl2/NrfF family IF561_02130 IPR013026 Tetratricopeptide repeat-containing domain IF561_02130 IPR017560 Cytochrome c-type biogenesis protein CcmI IF561_02130 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily IF561_02130 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_02140 IPR007428 MlaA lipoprotein IF561_02145 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IF561_02145 IPR042117 OMPP1/FadL/TodX superfamily IF561_02150 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IF561_02150 IPR042117 OMPP1/FadL/TodX superfamily IF561_02160 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_02160 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_02160 IPR013325 RNA polymerase sigma factor, region 2 IF561_02160 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IF561_02160 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IF561_02160 IPR014284 RNA polymerase sigma-70 like domain IF561_02160 IPR039425 RNA polymerase sigma-70 like IF561_02160 IPR007627 RNA polymerase sigma-70 region 2 IF561_02165 IPR012806 Acetyl-CoA C-acyltransferase FadI IF561_02165 IPR002155 Thiolase IF561_02165 IPR016039 Thiolase-like IF561_02165 IPR020617 Thiolase, C-terminal IF561_02165 IPR020613 Thiolase, conserved site IF561_02165 IPR020616 Thiolase, N-terminal IF561_02170 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IF561_02170 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IF561_02170 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_02170 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IF561_02170 IPR036291 NAD(P)-binding domain superfamily IF561_02170 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_02170 IPR001753 Enoyl-CoA hydratase/isomerase IF561_02170 IPR012802 Fatty oxidation complex, alpha subunit FadJ IF561_02170 IPR029045 ClpP/crotonase-like domain superfamily IF561_02180 IPR001431 Peptidase M16, zinc-binding site IF561_02180 IPR007863 Peptidase M16, C-terminal IF561_02180 IPR032632 Peptidase M16, middle/third domain IF561_02180 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IF561_02180 IPR011765 Peptidase M16, N-terminal IF561_02185 IPR013078 Histidine phosphatase superfamily, clade-1 IF561_02185 IPR029033 Histidine phosphatase superfamily IF561_02185 IPR004449 Phosphohistidine phosphatase SixA IF561_02190 IPR022990 Uncharacterised protein family UPF0115 IF561_02190 IPR036063 Smr domain superfamily IF561_02190 IPR002625 Smr domain IF561_02195 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_02195 IPR004556 Methyltransferase HemK-like IF561_02195 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific IF561_02195 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase IF561_02195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_02195 IPR007848 Methyltransferase small domain IF561_02200 IPR020541 Chorismate synthase, conserved site IF561_02200 IPR000453 Chorismate synthase IF561_02200 IPR035904 Chorismate synthase AroC superfamily IF561_02205 IPR005115 Uncharacterised domain UPF0126 IF561_02210 IPR007411 Elongation factor P hydroxylase IF561_02215 IPR014987 Uncharacterised protein family YfcL IF561_02220 IPR005025 NADPH-dependent FMN reductase-like IF561_02220 IPR029039 Flavoprotein-like superfamily IF561_02225 IPR006076 FAD dependent oxidoreductase IF561_02225 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_02225 IPR008471 MnmC-like methyltransferase IF561_02225 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC IF561_02225 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal IF561_02230 IPR016039 Thiolase-like IF561_02230 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IF561_02230 IPR018201 Beta-ketoacyl synthase, active site IF561_02230 IPR000794 Beta-ketoacyl synthase IF561_02230 IPR014030 Beta-ketoacyl synthase, N-terminal IF561_02230 IPR014031 Beta-ketoacyl synthase, C-terminal IF561_02235 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IF561_02235 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IF561_02235 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IF561_02235 IPR020921 Erythronate-4-phosphate dehydrogenase IF561_02235 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain IF561_02235 IPR036291 NAD(P)-binding domain superfamily IF561_02235 IPR038251 PdxB, dimerisation domain superfamily IF561_02240 IPR000534 Semialdehyde dehydrogenase, NAD-binding IF561_02240 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site IF561_02240 IPR012080 Aspartate-semialdehyde dehydrogenase IF561_02240 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type IF561_02240 IPR036291 NAD(P)-binding domain superfamily IF561_02240 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IF561_02250 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain IF561_02250 IPR020095 Pseudouridine synthase I, TruA, C-terminal IF561_02250 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_02250 IPR001406 Pseudouridine synthase I, TruA IF561_02255 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IF561_02255 IPR041010 Acetyl-coA carboxylase zinc finger domain IF561_02255 IPR029045 ClpP/crotonase-like domain superfamily IF561_02255 IPR034733 Acetyl-CoA carboxylase IF561_02255 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IF561_02260 IPR001645 Folylpolyglutamate synthetase IF561_02260 IPR018109 Folylpolyglutamate synthetase, conserved site IF561_02260 IPR036565 Mur-like, catalytic domain superfamily IF561_02260 IPR004101 Mur ligase, C-terminal IF561_02260 IPR036615 Mur ligase, C-terminal domain superfamily IF561_02260 IPR013221 Mur ligase, central IF561_02265 IPR036680 Sporulation-like domain superfamily IF561_02265 IPR007730 Sporulation-like domain IF561_02265 IPR032898 Cell division protein DedD IF561_02270 IPR003825 Colicin V production, CvpA IF561_02275 IPR017932 Glutamine amidotransferase type 2 domain IF561_02275 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_02275 IPR000836 Phosphoribosyltransferase domain IF561_02275 IPR029057 Phosphoribosyltransferase-like IF561_02275 IPR005854 Amidophosphoribosyltransferase IF561_02275 IPR035584 Amidophosphoribosyltransferase, N-terminal IF561_02280 IPR005119 LysR, substrate-binding IF561_02280 IPR000847 Transcription regulator HTH, LysR IF561_02280 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_02280 IPR036390 Winged helix DNA-binding domain superfamily IF561_02285 IPR036457 PPM-type phosphatase domain superfamily IF561_02285 IPR028616 Regulator of RpoS IF561_02285 IPR001789 Signal transduction response regulator, receiver domain IF561_02285 IPR039420 Transcriptional regulatory protein WalR-like IF561_02285 IPR011006 CheY-like superfamily IF561_02290 IPR007401 Protein of unknown function DUF454 IF561_02295 IPR005764 Adenine phosphoribosyl transferase IF561_02295 IPR000836 Phosphoribosyltransferase domain IF561_02295 IPR029057 Phosphoribosyltransferase-like IF561_02300 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily IF561_02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02300 IPR021029 DNA polymerase III, tau subunit, domain V IF561_02300 IPR012763 DNA polymerase III, subunit gamma/ tau IF561_02300 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IF561_02300 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV IF561_02300 IPR001270 ClpA/B family IF561_02300 IPR003593 AAA+ ATPase domain IF561_02300 IPR022754 DNA polymerase III, gamma subunit, domain III IF561_02305 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IF561_02305 IPR004401 Nucleoid-associated protein YbaB/EbfC family IF561_02310 IPR015967 Recombination protein RecR, conserved site IF561_02310 IPR034137 RecR, TOPRIM domain IF561_02310 IPR023628 Recombination protein RecR, C4-type zinc finger IF561_02310 IPR000093 DNA recombination protein RecR IF561_02310 IPR006171 TOPRIM domain IF561_02310 IPR023627 Recombination protein RecR IF561_02315 IPR022357 Major intrinsic protein, conserved site IF561_02315 IPR023271 Aquaporin-like IF561_02315 IPR034294 Aquaporin transporter IF561_02315 IPR023743 Aquaporin Z IF561_02315 IPR000425 Major intrinsic protein IF561_02325 IPR006056 RidA family IF561_02325 IPR019897 RidA, conserved site IF561_02325 IPR035959 RutC-like superfamily IF561_02325 IPR006175 YjgF/YER057c/UK114 family IF561_02330 IPR005130 Serine dehydratase-like, alpha subunit IF561_02330 IPR021144 Uncharacterised protein family UPF0597 IF561_02340 IPR005358 Putative zinc- or iron-chelating domain containing protein IF561_02345 IPR007341 Transglycosylase-associated protein IF561_02350 IPR005358 Putative zinc- or iron-chelating domain containing protein IF561_02350 IPR008228 Uncharacterised conserved protein UCP006173 IF561_02355 IPR008910 Conserved TM helix IF561_02355 IPR023408 Mechanosensitive ion channel MscS domain superfamily IF561_02355 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IF561_02355 IPR006685 Mechanosensitive ion channel MscS IF561_02355 IPR010920 LSM domain superfamily IF561_02355 IPR006686 Mechanosensitive ion channel MscS, conserved site IF561_02355 IPR011066 Mechanosensitive ion channel MscS, C-terminal IF561_02360 IPR007138 Antibiotic biosynthesis monooxygenase domain IF561_02360 IPR011008 Dimeric alpha-beta barrel IF561_02365 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_02365 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_02365 IPR004361 Glyoxalase I IF561_02365 IPR018146 Glyoxalase I, conserved site IF561_02365 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_02375 IPR001952 Alkaline phosphatase IF561_02375 IPR018299 Alkaline phosphatase, active site IF561_02375 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_02390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_02390 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted IF561_02390 IPR025714 Methyltransferase domain IF561_02395 IPR003660 HAMP domain IF561_02395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_02395 IPR029151 Periplasmic sensor-like domain superfamily IF561_02395 IPR033479 Double Cache domain 1 IF561_02400 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase IF561_02400 IPR025532 Glucose-6-phosphate 1-epimerase IF561_02400 IPR011013 Galactose mutarotase-like domain superfamily IF561_02400 IPR014718 Glycoside hydrolase-type carbohydrate-binding IF561_02405 IPR036291 NAD(P)-binding domain superfamily IF561_02405 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IF561_02405 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IF561_02405 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IF561_02405 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IF561_02405 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IF561_02410 IPR028427 Peptide methionine sulfoxide reductase IF561_02410 IPR002579 Peptide methionine sulphoxide reductase MrsB IF561_02410 IPR011057 Mss4-like superfamily IF561_02420 IPR009749 Protein of unknown function DUF1315 IF561_02425 IPR037152 L-asparaginase, N-terminal domain superfamily IF561_02425 IPR027474 L-asparaginase, N-terminal IF561_02425 IPR041725 Type I (cytosolic) L-asparaginase IF561_02425 IPR027473 L-asparaginase, C-terminal IF561_02425 IPR027475 Asparaginase/glutaminase, active site 2 IF561_02425 IPR020827 Asparaginase/glutaminase, active site 1 IF561_02425 IPR006034 Asparaginase/glutaminase-like IF561_02425 IPR036152 Asparaginase/glutaminase-like superfamily IF561_02425 IPR040919 Asparaginase/glutaminase, C-terminal IF561_02425 IPR006033 Type I L-asparaginase family IF561_02430 IPR029045 ClpP/crotonase-like domain superfamily IF561_02430 IPR004634 Peptidase S49, protease IV IF561_02430 IPR004635 Peptidase S49, SppA IF561_02430 IPR002142 Peptidase S49 IF561_02430 IPR033854 Signal peptide peptidase A IF561_02435 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IF561_02435 IPR023753 FAD/NAD(P)-binding domain IF561_02435 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_02435 IPR013785 Aldolase-type TIM barrel IF561_02440 IPR029479 Nitroreductase IF561_02440 IPR000415 Nitroreductase-like IF561_02440 IPR026021 Putative NAD(P)H nitroreductase YdjA-like IF561_02445 IPR034144 DNA topoisomerase 3-like, TOPRIM domain IF561_02445 IPR006171 TOPRIM domain IF561_02445 IPR005738 DNA topoisomerase III IF561_02445 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IF561_02445 IPR023405 DNA topoisomerase, type IA, core domain IF561_02445 IPR000380 DNA topoisomerase, type IA IF561_02445 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IF561_02445 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IF561_02445 IPR013497 DNA topoisomerase, type IA, central IF561_02445 IPR023406 DNA topoisomerase, type IA, active site IF561_02445 IPR003601 DNA topoisomerase, type IA, domain 2 IF561_02445 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IF561_02455 IPR036291 NAD(P)-binding domain superfamily IF561_02455 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_02460 IPR023801 Histone deacetylase domain IF561_02460 IPR037138 Histone deacetylase domain superfamily IF561_02460 IPR023696 Ureohydrolase domain superfamily IF561_02460 IPR000286 Histone deacetylase family IF561_02470 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_02470 IPR000917 Sulfatase, N-terminal IF561_02470 IPR012159 Inner membrane protein YejM IF561_02470 IPR024588 Inner membrane protein YejM, N-terminal IF561_02475 IPR009857 Uncharacterised protein family UPF0352 IF561_02475 IPR023202 YejL-like superfamily IF561_02480 IPR007358 Nucleoid-associated protein NdpA IF561_02490 IPR025668 Transposase DDE domain IF561_02500 IPR004770 Na+/H+ antiporter NhaC IF561_02500 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IF561_02505 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site IF561_02505 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type IF561_02505 IPR012080 Aspartate-semialdehyde dehydrogenase IF561_02505 IPR036291 NAD(P)-binding domain superfamily IF561_02505 IPR000534 Semialdehyde dehydrogenase, NAD-binding IF561_02505 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IF561_02510 IPR018490 Cyclic nucleotide-binding-like IF561_02510 IPR000595 Cyclic nucleotide-binding domain IF561_02510 IPR005821 Ion transport domain IF561_02510 IPR014710 RmlC-like jelly roll fold IF561_02510 IPR028325 Voltage-gated potassium channel IF561_02510 IPR018488 Cyclic nucleotide-binding, conserved site IF561_02515 IPR002771 Multiple antibiotic resistance (MarC)-related IF561_02520 IPR015590 Aldehyde dehydrogenase domain IF561_02520 IPR016161 Aldehyde/histidinol dehydrogenase IF561_02520 IPR039697 Iron-type alcohol dehydrogenase-like IF561_02520 IPR018211 Alcohol dehydrogenase, iron-type, conserved site IF561_02520 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IF561_02520 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain IF561_02520 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_02520 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase IF561_02520 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_02535 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IF561_02535 IPR019832 Manganese/iron superoxide dismutase, C-terminal IF561_02535 IPR019833 Manganese/iron superoxide dismutase, binding site IF561_02535 IPR001189 Manganese/iron superoxide dismutase IF561_02535 IPR019831 Manganese/iron superoxide dismutase, N-terminal IF561_02535 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IF561_02540 IPR036249 Thioredoxin-like superfamily IF561_02540 IPR004480 Monothiol glutaredoxin-related IF561_02540 IPR014434 Monothiol glutaredoxin IF561_02540 IPR033658 Glutaredoxin, PICOT-like IF561_02540 IPR002109 Glutaredoxin IF561_02550 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IF561_02550 IPR032813 Putative Na+/H+ antiporter, N-terminal IF561_02555 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_02555 IPR012337 Ribonuclease H-like superfamily IF561_02555 IPR036397 Ribonuclease H superfamily IF561_02555 IPR005987 Ribonuclease T IF561_02560 IPR036737 OmpA-like domain superfamily IF561_02560 IPR041544 MotY N-terminal domain IF561_02560 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_02560 IPR006665 OmpA-like domain IF561_02565 IPR020206 Uncharacterised protein family, VP2110 IF561_02570 IPR018146 Glyoxalase I, conserved site IF561_02570 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_02570 IPR004361 Glyoxalase I IF561_02570 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_02570 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_02575 IPR011257 DNA glycosylase IF561_02575 IPR004036 Endonuclease III-like, conserved site-2 IF561_02575 IPR004035 Endonuclease III, iron-sulphur binding site IF561_02575 IPR003265 HhH-GPD domain IF561_02575 IPR000445 Helix-hairpin-helix motif IF561_02575 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IF561_02575 IPR005759 Endonuclease III IF561_02575 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IF561_02580 IPR003667 NqrDE/RnfAE IF561_02580 IPR010968 Ion-translocating oxidoreductase complex subunit E IF561_02585 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG IF561_02585 IPR007329 FMN-binding IF561_02590 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D IF561_02590 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD IF561_02595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_02595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_02595 IPR019554 Soluble ligand binding domain IF561_02595 IPR026902 RnfC Barrel sandwich hybrid domain IF561_02595 IPR009051 Alpha-helical ferredoxin IF561_02595 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain IF561_02595 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily IF561_02595 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC IF561_02600 IPR007202 4Fe-4S domain IF561_02600 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_02600 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_02600 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB IF561_02600 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria IF561_02605 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA IF561_02605 IPR003667 NqrDE/RnfAE IF561_02615 IPR024759 UvrB, YAD/RRR-motif-containing domain IF561_02615 IPR041471 UvrB, interaction domain IF561_02615 IPR036876 UVR domain superfamily IF561_02615 IPR004807 UvrABC system, subunit B IF561_02615 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02615 IPR001650 Helicase, C-terminal IF561_02615 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_02615 IPR001943 UVR domain IF561_02615 IPR006935 Helicase/UvrB, N-terminal IF561_02620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_02620 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_02620 IPR001789 Signal transduction response regulator, receiver domain IF561_02620 IPR025944 Sigma-54 interaction domain, conserved site IF561_02620 IPR002197 DNA binding HTH domain, Fis-type IF561_02620 IPR009057 Homeobox-like domain superfamily IF561_02620 IPR003593 AAA+ ATPase domain IF561_02620 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02620 IPR011006 CheY-like superfamily IF561_02625 IPR036641 HPT domain superfamily IF561_02625 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_02630 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 IF561_02630 IPR010119 Gluconeogenesis factor IF561_02630 IPR038136 Gluconeogenesis factor superfamily IF561_02635 IPR013785 Aldolase-type TIM barrel IF561_02635 IPR006638 Elp3/MiaB/NifB IF561_02635 IPR013483 Molybdenum cofactor biosynthesis protein A IF561_02635 IPR010505 Molybdenum cofactor synthesis C-terminal IF561_02635 IPR007197 Radical SAM IF561_02640 IPR001453 MoaB/Mog domain IF561_02640 IPR036425 MoaB/Mog-like domain superfamily IF561_02640 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria IF561_02640 IPR008284 Molybdenum cofactor biosynthesis, conserved site IF561_02640 IPR012245 Molybdenum cofactor biosynthesis protein MoaB IF561_02645 IPR023045 Molybdenum cofactor biosynthesis C IF561_02645 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily IF561_02645 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain IF561_02650 IPR012675 Beta-grasp domain superfamily IF561_02650 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IF561_02650 IPR003749 Sulfur carrier ThiS/MoaD-like IF561_02655 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily IF561_02655 IPR003448 Molybdopterin biosynthesis MoaE IF561_02660 IPR023765 Solute-binding protein family 5, conserved site IF561_02660 IPR000914 Solute-binding protein family 5 domain IF561_02660 IPR039424 Solute-binding protein family 5 IF561_02660 IPR030678 Peptide/nickel binding protein, MppA-type IF561_02665 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_02665 IPR035906 MetI-like superfamily IF561_02670 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_02670 IPR035906 MetI-like superfamily IF561_02670 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_02675 IPR017871 ABC transporter, conserved site IF561_02675 IPR003593 AAA+ ATPase domain IF561_02675 IPR003439 ABC transporter-like IF561_02675 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_02675 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02680 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02680 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_02680 IPR017871 ABC transporter, conserved site IF561_02680 IPR003593 AAA+ ATPase domain IF561_02680 IPR003439 ABC transporter-like IF561_02685 IPR016639 Glutathione S-transferase Omega/GSH IF561_02685 IPR004045 Glutathione S-transferase, N-terminal IF561_02685 IPR036249 Thioredoxin-like superfamily IF561_02685 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_02685 IPR010987 Glutathione S-transferase, C-terminal-like IF561_02685 IPR040079 Glutathione Transferase family IF561_02695 IPR025105 Domain of unknown function DUF4010 IF561_02700 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily IF561_02700 IPR042112 Phosphate acetyltransferase, domain 2 IF561_02700 IPR042113 Phosphate acetyltransferase, domain 1 IF561_02700 IPR004614 Phosphate acetyltransferase IF561_02700 IPR002505 Phosphate acetyl/butaryl transferase IF561_02700 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02700 IPR016475 Phosphate acetyltransferase, bacteria IF561_02700 IPR010766 DRTGG IF561_02705 IPR004372 Acetate/propionate kinase IF561_02705 IPR000890 Aliphatic acid kinase, short-chain IF561_02705 IPR023865 Aliphatic acid kinase, short-chain, conserved site IF561_02710 IPR007334 Uncharacterised protein family UPF0208 IF561_02720 IPR001851 ABC transporter, permease IF561_02725 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 IF561_02725 IPR003593 AAA+ ATPase domain IF561_02725 IPR003439 ABC transporter-like IF561_02725 IPR017871 ABC transporter, conserved site IF561_02725 IPR015856 ABC transporter, CbiO/EcfA subunit IF561_02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02735 IPR000160 GGDEF domain IF561_02735 IPR001789 Signal transduction response regulator, receiver domain IF561_02735 IPR029787 Nucleotide cyclase IF561_02735 IPR011006 CheY-like superfamily IF561_02740 IPR013785 Aldolase-type TIM barrel IF561_02740 IPR035587 DUS-like, FMN-binding domain IF561_02740 IPR032886 tRNA-dihydrouridine(16) synthase IF561_02740 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal IF561_02740 IPR001269 tRNA-dihydrouridine synthase IF561_02740 IPR018517 tRNA-dihydrouridine synthase, conserved site IF561_02745 IPR036266 SecA, Wing/Scaffold superfamily IF561_02745 IPR011116 SecA Wing/Scaffold IF561_02745 IPR011130 SecA, preprotein cross-linking domain IF561_02745 IPR014018 SecA motor DEAD IF561_02745 IPR011115 SecA DEAD-like, N-terminal IF561_02745 IPR020937 SecA conserved site IF561_02745 IPR036670 SecA, preprotein cross-linking domain superfamily IF561_02745 IPR004027 SEC-C motif IF561_02745 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02745 IPR000185 Protein translocase subunit SecA IF561_02750 IPR023380 DsbB-like superfamily IF561_02750 IPR022920 Disulphide bond formation protein DsbB IF561_02750 IPR003752 Disulphide bond formation protein DsbB/BdbC IF561_02755 IPR004671 Na+/H+ antiporter NhaB IF561_02760 IPR014178 Fatty acid response transcription factor FadR IF561_02760 IPR028374 FadR, C-terminal domain IF561_02760 IPR008920 Transcription regulator FadR/GntR, C-terminal IF561_02760 IPR000524 Transcription regulator HTH, GntR IF561_02760 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_02760 IPR036390 Winged helix DNA-binding domain superfamily IF561_02770 IPR012340 Nucleic acid-binding, OB-fold IF561_02770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_02770 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain IF561_02770 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal IF561_02770 IPR023458 Methionine-tRNA ligase, type 1 IF561_02770 IPR014758 Methionyl-tRNA synthetase IF561_02770 IPR015413 Methionyl/Leucyl tRNA synthetase IF561_02770 IPR033911 Methioninyl-tRNA synthetase core domain IF561_02770 IPR029038 Methionyl-tRNA synthetase, Zn-domain IF561_02770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_02770 IPR002547 tRNA-binding domain IF561_02770 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_02775 IPR034904 Fe-S cluster assembly domain superfamily IF561_02775 IPR019591 Mrp/NBP35 ATP-binding protein IF561_02775 IPR000808 Mrp, conserved site IF561_02775 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02775 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IF561_02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02780 IPR006083 Phosphoribulokinase/uridine kinase IF561_02780 IPR026008 Uridine kinase IF561_02780 IPR000764 Uridine kinase-like IF561_02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02790 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain IF561_02790 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR IF561_02795 IPR023485 Phosphotyrosine protein phosphatase I IF561_02795 IPR036196 Phosphotyrosine protein phosphatase I superfamily IF561_02795 IPR017867 Protein-tyrosine phosphatase, low molecular weight IF561_02800 IPR018045 Sulphate anion transporter, conserved site IF561_02800 IPR011547 SLC26A/SulP transporter domain IF561_02800 IPR001902 SLC26A/SulP transporter IF561_02800 IPR002645 STAS domain IF561_02800 IPR036513 STAS domain superfamily IF561_02805 IPR003029 S1 domain IF561_02805 IPR022967 RNA-binding domain, S1 IF561_02805 IPR004659 Ribonuclease E/G IF561_02805 IPR028878 Ribonuclease E IF561_02805 IPR012340 Nucleic acid-binding, OB-fold IF561_02805 IPR021968 Polyribonucleotide phosphorylase C-terminal IF561_02805 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IF561_02810 IPR002942 RNA-binding S4 domain IF561_02810 IPR036986 RNA-binding S4 domain superfamily IF561_02810 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_02810 IPR006225 Pseudouridine synthase, RluC/RluD IF561_02810 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_02810 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_02815 IPR029001 Inosine triphosphate pyrophosphatase-like IF561_02815 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IF561_02820 IPR003772 Large ribosomal RNA subunit accumulation protein YceD IF561_02820 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria IF561_02825 IPR002677 Ribosomal protein L32p IF561_02825 IPR011332 Zinc-binding ribosomal protein IF561_02830 IPR003664 Fatty acid synthesis PlsX protein IF561_02830 IPR012281 Phospholipid biosynthesis protein, PlsX-like IF561_02835 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IF561_02835 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IF561_02835 IPR016039 Thiolase-like IF561_02835 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IF561_02840 IPR001227 Acyl transferase domain superfamily IF561_02840 IPR014043 Acyl transferase IF561_02840 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_02840 IPR024925 Malonyl CoA-acyl carrier protein transacylase IF561_02840 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type IF561_02840 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IF561_02845 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_02845 IPR036291 NAD(P)-binding domain superfamily IF561_02845 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_02845 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_02850 IPR036736 ACP-like superfamily IF561_02850 IPR003231 Acyl carrier protein (ACP) IF561_02850 IPR009081 Phosphopantetheine binding ACP domain IF561_02850 IPR006162 Phosphopantetheine attachment site IF561_02855 IPR016039 Thiolase-like IF561_02855 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IF561_02855 IPR014031 Beta-ketoacyl synthase, C-terminal IF561_02855 IPR014030 Beta-ketoacyl synthase, N-terminal IF561_02855 IPR000794 Beta-ketoacyl synthase IF561_02855 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IF561_02855 IPR018201 Beta-ketoacyl synthase, active site IF561_02860 IPR017824 Aminodeoxychorismate lyase, class IV IF561_02860 IPR001544 Aminotransferase class IV IF561_02860 IPR018300 Aminotransferase, class IV, conserved site IF561_02860 IPR036038 Aminotransferase-like, PLP-dependent enzymes IF561_02865 IPR003770 Endolytic murein transglycosylase IF561_02870 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02870 IPR039430 Thymidylate kinase-like domain IF561_02870 IPR018095 Thymidylate kinase, conserved site IF561_02870 IPR018094 Thymidylate kinase IF561_02875 IPR004622 DNA polymerase III, delta prime subunit IF561_02875 IPR015199 DNA polymerase III, delta subunit, C-terminal IF561_02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02880 IPR001130 TatD family IF561_02880 IPR018228 Deoxyribonuclease, TatD-related, conserved site IF561_02880 IPR015991 Uncharacterised hydrolase TatD-type IF561_02880 IPR032466 Metal-dependent hydrolase IF561_02885 IPR036878 Glucose permease domain IIB IF561_02885 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_02885 IPR003352 Phosphotransferase system, EIIC IF561_02885 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_02885 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_02885 IPR011299 PTS system glucose-specific IIBC component IF561_02885 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IF561_02900 IPR000175 Sodium:neurotransmitter symporter IF561_02900 IPR037272 Sodium:neurotransmitter symporter superfamily IF561_02915 IPR037483 YjjU-like IF561_02915 IPR002641 Patatin-like phospholipase domain IF561_02915 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_02920 IPR040442 Pyruvate kinase-like domain superfamily IF561_02920 IPR036918 Pyruvate kinase, C-terminal domain superfamily IF561_02920 IPR018209 Pyruvate kinase, active site IF561_02920 IPR015793 Pyruvate kinase, barrel IF561_02920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_02920 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_02920 IPR001697 Pyruvate kinase IF561_02920 IPR015795 Pyruvate kinase, C-terminal IF561_02920 IPR015806 Pyruvate kinase, insert domain superfamily IF561_02925 IPR000600 ROK family IF561_02925 IPR036390 Winged helix DNA-binding domain superfamily IF561_02925 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_02930 IPR001789 Signal transduction response regulator, receiver domain IF561_02930 IPR011006 CheY-like superfamily IF561_02930 IPR002545 CheW-like domain IF561_02930 IPR024181 Chemotaxis response regulator CheV IF561_02930 IPR036061 CheW-like domain superfamily IF561_02935 IPR040982 DNA polymerase III alpha subunit finger domain IF561_02935 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IF561_02935 IPR029460 DNA polymerase, helix-hairpin-helix motif IF561_02935 IPR023073 DNA polymerase, error-prone IF561_02935 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_02935 IPR004013 PHP domain IF561_02935 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_02935 IPR004805 DNA polymerase III, alpha subunit IF561_02950 IPR036291 NAD(P)-binding domain superfamily IF561_02950 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_02950 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_02955 IPR029045 ClpP/crotonase-like domain superfamily IF561_02955 IPR002142 Peptidase S49 IF561_02955 IPR013703 Peptidase S49, N-terminal proteobacteria IF561_02960 IPR003136 Cytidylate kinase IF561_02960 IPR011994 Cytidylate kinase domain IF561_02960 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_02965 IPR000110 Ribosomal protein S1 IF561_02965 IPR003029 S1 domain IF561_02965 IPR012340 Nucleic acid-binding, OB-fold IF561_02965 IPR022967 RNA-binding domain, S1 IF561_02970 IPR005685 Integration host factor, beta subunit IF561_02970 IPR020816 Histone-like DNA-binding protein, conserved site IF561_02970 IPR000119 Histone-like DNA-binding protein IF561_02970 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_02975 IPR010445 Lipopolysaccharide assembly protein A domain IF561_02975 IPR032906 Lipopolysaccharide assembly protein A IF561_02980 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_02980 IPR019734 Tetratricopeptide repeat IF561_02980 IPR013026 Tetratricopeptide repeat-containing domain IF561_02980 IPR041166 LapB, rubredoxin metal binding domain IF561_02980 IPR030865 Lipopolysaccharide assembly protein B IF561_02985 IPR013785 Aldolase-type TIM barrel IF561_02985 IPR001754 Orotidine 5'-phosphate decarboxylase domain IF561_02985 IPR011060 Ribulose-phosphate binding barrel IF561_02985 IPR014732 Orotidine 5'-phosphate decarboxylase IF561_02985 IPR018089 Orotidine 5'-phosphate decarboxylase, active site IF561_02990 IPR000914 Solute-binding protein family 5 domain IF561_02990 IPR030678 Peptide/nickel binding protein, MppA-type IF561_02990 IPR023765 Solute-binding protein family 5, conserved site IF561_02990 IPR039424 Solute-binding protein family 5 IF561_03000 IPR001509 NAD-dependent epimerase/dehydratase IF561_03000 IPR036291 NAD(P)-binding domain superfamily IF561_03005 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase IF561_03005 IPR001173 Glycosyltransferase 2-like IF561_03005 IPR029044 Nucleotide-diphospho-sugar transferases IF561_03015 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase IF561_03015 IPR003342 Glycosyl transferase family 39/83 IF561_03025 IPR003399 Mce/MlaD IF561_03030 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type IF561_03030 IPR007498 Intermembrane transport protein PqiA-like IF561_03035 IPR036909 Cytochrome c-like domain superfamily IF561_03035 IPR009056 Cytochrome c-like domain IF561_03040 IPR024167 Cytochrome c4-like IF561_03040 IPR036909 Cytochrome c-like domain superfamily IF561_03040 IPR009056 Cytochrome c-like domain IF561_03045 IPR006657 Molybdopterin dinucleotide-binding domain IF561_03045 IPR041929 Tetrathionate reductase subunit A, N-terminal IF561_03045 IPR037946 Tetrathionate reductase subunit A, MopB domain IF561_03045 IPR006656 Molybdopterin oxidoreductase IF561_03045 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_03045 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_03050 IPR005614 NrfD family IF561_03055 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_03055 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_03055 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_03060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_03060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_03060 IPR005467 Histidine kinase domain IF561_03060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_03060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_03060 IPR003594 Histidine kinase/HSP90-like ATPase IF561_03065 IPR011006 CheY-like superfamily IF561_03065 IPR001789 Signal transduction response regulator, receiver domain IF561_03065 IPR000792 Transcription regulator LuxR, C-terminal IF561_03065 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03070 IPR005119 LysR, substrate-binding IF561_03070 IPR000847 Transcription regulator HTH, LysR IF561_03070 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03070 IPR036390 Winged helix DNA-binding domain superfamily IF561_03080 IPR035671 DsbD gamma IF561_03080 IPR003834 Cytochrome C biogenesis protein, transmembrane domain IF561_03080 IPR036249 Thioredoxin-like superfamily IF561_03080 IPR017937 Thioredoxin, conserved site IF561_03080 IPR013766 Thioredoxin domain IF561_03080 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain IF561_03080 IPR022910 Thiol:disulphide interchange protein DsbD IF561_03080 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily IF561_03085 IPR005746 Thioredoxin IF561_03085 IPR036249 Thioredoxin-like superfamily IF561_03085 IPR017937 Thioredoxin, conserved site IF561_03085 IPR013766 Thioredoxin domain IF561_03100 IPR010280 (Uracil-5)-methyltransferase family IF561_03100 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD IF561_03100 IPR030390 RNA methyltransferase TrmA, active site IF561_03100 IPR012340 Nucleic acid-binding, OB-fold IF561_03100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_03100 IPR002792 TRAM domain IF561_03115 IPR006143 RND efflux pump, membrane fusion protein IF561_03115 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_03115 IPR030190 Macrolide export protein MacA IF561_03125 IPR003593 AAA+ ATPase domain IF561_03125 IPR003439 ABC transporter-like IF561_03125 IPR003838 ABC transporter permease protein domain IF561_03125 IPR017871 ABC transporter, conserved site IF561_03125 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_03125 IPR025857 MacB-like periplasmic core domain IF561_03125 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_03130 IPR025857 MacB-like periplasmic core domain IF561_03130 IPR017871 ABC transporter, conserved site IF561_03130 IPR003439 ABC transporter-like IF561_03130 IPR003838 ABC transporter permease protein domain IF561_03130 IPR003593 AAA+ ATPase domain IF561_03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_03130 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_03135 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_03135 IPR017871 ABC transporter, conserved site IF561_03135 IPR003439 ABC transporter-like IF561_03135 IPR003593 AAA+ ATPase domain IF561_03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_03135 IPR003838 ABC transporter permease protein domain IF561_03135 IPR025857 MacB-like periplasmic core domain IF561_03155 IPR011009 Protein kinase-like domain superfamily IF561_03155 IPR005543 PASTA domain IF561_03155 IPR000719 Protein kinase domain IF561_03155 IPR017441 Protein kinase, ATP binding site IF561_03155 IPR008271 Serine/threonine-protein kinase, active site IF561_03165 IPR001123 Amino acid exporter protein, LeuE-type IF561_03180 IPR038071 UROD/MetE-like superfamily IF561_03180 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal IF561_03180 IPR006276 Cobalamin-independent methionine synthase IF561_03180 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal IF561_03190 IPR005694 Efflux pump membrane protein IF561_03190 IPR030196 Multidrug resistance protein MdtN IF561_03190 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_03195 IPR036390 Winged helix DNA-binding domain superfamily IF561_03195 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03195 IPR000847 Transcription regulator HTH, LysR IF561_03195 IPR005119 LysR, substrate-binding IF561_03215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_03215 IPR005467 Histidine kinase domain IF561_03215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_03215 IPR003594 Histidine kinase/HSP90-like ATPase IF561_03215 IPR003660 HAMP domain IF561_03215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_03215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_03220 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03220 IPR011006 CheY-like superfamily IF561_03220 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_03220 IPR001789 Signal transduction response regulator, receiver domain IF561_03220 IPR039420 Transcriptional regulatory protein WalR-like IF561_03225 IPR003660 HAMP domain IF561_03225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_03230 IPR024560 Uncharacterised protein family UPF0313, C-terminal IF561_03230 IPR006638 Elp3/MiaB/NifB IF561_03230 IPR020612 Methylthiotransferase, conserved site IF561_03230 IPR022946 Uncharacterised protein family UPF0313 IF561_03230 IPR023404 Radical SAM, alpha/beta horseshoe IF561_03230 IPR007197 Radical SAM IF561_03230 IPR013704 Uncharacterised protein family UPF0313, N-terminal IF561_03235 IPR001294 Phytochrome IF561_03235 IPR029787 Nucleotide cyclase IF561_03235 IPR016132 Phytochrome chromophore attachment domain IF561_03235 IPR013515 Phytochrome, central region IF561_03235 IPR000160 GGDEF domain IF561_03235 IPR029016 GAF-like domain superfamily IF561_03235 IPR003018 GAF domain IF561_03235 IPR001633 EAL domain IF561_03235 IPR035919 EAL domain superfamily IF561_03250 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain IF561_03250 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03250 IPR036390 Winged helix DNA-binding domain superfamily IF561_03250 IPR000847 Transcription regulator HTH, LysR IF561_03250 IPR005119 LysR, substrate-binding IF561_03255 IPR006276 Cobalamin-independent methionine synthase IF561_03255 IPR038071 UROD/MetE-like superfamily IF561_03255 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal IF561_03255 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal IF561_03265 IPR011008 Dimeric alpha-beta barrel IF561_03265 IPR005545 YCII-related IF561_03270 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase IF561_03270 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain IF561_03270 IPR029069 HotDog domain superfamily IF561_03270 IPR006683 Thioesterase domain IF561_03275 IPR006008 Intracellular septation protein A IF561_03285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_03285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_03285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_03285 IPR001789 Signal transduction response regulator, receiver domain IF561_03285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_03285 IPR011006 CheY-like superfamily IF561_03285 IPR005467 Histidine kinase domain IF561_03285 IPR003594 Histidine kinase/HSP90-like ATPase IF561_03290 IPR035304 Acyl homoserine lactone synthase IF561_03295 IPR023954 C4-dicarboxylate transport protein IF561_03295 IPR001991 Sodium:dicarboxylate symporter IF561_03295 IPR018107 Sodium:dicarboxylate symporter, conserved site IF561_03295 IPR036458 Sodium:dicarboxylate symporter superfamily IF561_03300 IPR020845 AMP-binding, conserved site IF561_03300 IPR042099 AMP-dependent synthetase-like superfamily IF561_03300 IPR025110 AMP-binding enzyme, C-terminal domain IF561_03300 IPR020459 AMP-binding IF561_03300 IPR000873 AMP-dependent synthetase/ligase IF561_03305 IPR018490 Cyclic nucleotide-binding-like IF561_03305 IPR018488 Cyclic nucleotide-binding, conserved site IF561_03305 IPR000595 Cyclic nucleotide-binding domain IF561_03305 IPR012318 Crp-type HTH domain IF561_03305 IPR014710 RmlC-like jelly roll fold IF561_03305 IPR018335 Transcription regulator HTH, Crp-type, conserved site IF561_03305 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03305 IPR036390 Winged helix DNA-binding domain superfamily IF561_03310 IPR002028 Tryptophan synthase, alpha chain IF561_03310 IPR018204 Tryptophan synthase, alpha chain, active site IF561_03310 IPR013785 Aldolase-type TIM barrel IF561_03310 IPR011060 Ribulose-phosphate binding barrel IF561_03315 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_03315 IPR006653 Tryptophan synthase, beta chain, conserved site IF561_03315 IPR006654 Tryptophan synthase, beta chain IF561_03315 IPR023026 Tryptophan synthase beta chain/beta chain-like IF561_03315 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_03320 IPR013785 Aldolase-type TIM barrel IF561_03320 IPR013798 Indole-3-glycerol phosphate synthase IF561_03320 IPR001468 Indole-3-glycerol phosphate synthase, conserved site IF561_03320 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) IF561_03320 IPR011060 Ribulose-phosphate binding barrel IF561_03325 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IF561_03325 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IF561_03325 IPR005940 Anthranilate phosphoribosyl transferase IF561_03325 IPR000312 Glycosyl transferase, family 3 IF561_03325 IPR017459 Glycosyl transferase family 3, N-terminal domain IF561_03330 IPR029062 Class I glutamine amidotransferase-like IF561_03330 IPR017926 Glutamine amidotransferase IF561_03330 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain IF561_03335 IPR019999 Anthranilate synthase component I-like IF561_03335 IPR005801 ADC synthase IF561_03335 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial IF561_03335 IPR006805 Anthranilate synthase component I, N-terminal IF561_03335 IPR015890 Chorismate-utilising enzyme, C-terminal IF561_03340 IPR012639 Tryptophan operon leader peptide IF561_03345 IPR004013 PHP domain IF561_03345 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_03345 IPR016195 Polymerase/histidinol phosphatase-like IF561_03350 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IF561_03350 IPR006070 YrdC-like domain IF561_03360 IPR036986 RNA-binding S4 domain superfamily IF561_03360 IPR002942 RNA-binding S4 domain IF561_03360 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IF561_03360 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_03360 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_03360 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IF561_03360 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IF561_03365 IPR007376 dsDNA mimic, putative IF561_03365 IPR036763 Putative dsDNA mimic superfamily IF561_03370 IPR008991 Translation protein SH3-like domain superfamily IF561_03370 IPR001059 Translation elongation factor P/YeiP, central IF561_03370 IPR011897 Translation elongation factor P-like, YeiP IF561_03370 IPR013852 Translation elongation factor P/YeiP, conserved site IF561_03370 IPR020599 Translation elongation factor P/YeiP IF561_03370 IPR014722 Ribosomal protein L2, domain 2 IF561_03370 IPR015365 Elongation factor P, C-terminal IF561_03370 IPR013185 Translation elongation factor, KOW-like IF561_03370 IPR012340 Nucleic acid-binding, OB-fold IF561_03380 IPR006172 DNA-directed DNA polymerase, family B IF561_03380 IPR017964 DNA-directed DNA polymerase, family B, conserved site IF561_03380 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain IF561_03380 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain IF561_03380 IPR042087 DNA polymerase family B, C-terminal domain IF561_03380 IPR023211 DNA polymerase, palm domain superfamily IF561_03380 IPR012337 Ribonuclease H-like superfamily IF561_03380 IPR036397 Ribonuclease H superfamily IF561_03385 IPR000792 Transcription regulator LuxR, C-terminal IF561_03385 IPR001789 Signal transduction response regulator, receiver domain IF561_03385 IPR011006 CheY-like superfamily IF561_03385 IPR016032 Signal transduction response regulator, C-terminal effector IF561_03390 IPR000305 GIY-YIG endonuclease IF561_03390 IPR035901 GIY-YIG endonuclease superfamily IF561_03390 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IF561_03390 IPR010994 RuvA domain 2-like IF561_03390 IPR001943 UVR domain IF561_03390 IPR036876 UVR domain superfamily IF561_03390 IPR004791 UvrABC system, subunit C IF561_03390 IPR001162 UvrC family homology region IF561_03390 IPR038476 UvrC homology region 2 superfamily IF561_03395 IPR000462 CDP-alcohol phosphatidyltransferase IF561_03395 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial IF561_03395 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase IF561_03420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_03420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_03420 IPR004637 2,4-diaminobutyrate 4-transaminase IF561_03420 IPR005814 Aminotransferase class-III IF561_03420 IPR015424 Pyridoxal phosphate-dependent transferase IF561_03425 IPR036291 NAD(P)-binding domain superfamily IF561_03425 IPR032095 Saccharopine dehydrogenase, C-terminal IF561_03425 IPR005097 Saccharopine dehydrogenase, NADP binding domain IF561_03430 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_03430 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IF561_03430 IPR005730 Carboxynorspermidine decarboxylase IF561_03430 IPR029066 PLP-binding barrel IF561_03445 IPR001453 MoaB/Mog domain IF561_03445 IPR036653 CinA-like, C-terminal IF561_03445 IPR008135 Competence-induced protein CinA IF561_03445 IPR036425 MoaB/Mog-like domain superfamily IF561_03455 IPR009078 Ferritin-like superfamily IF561_03455 IPR012348 Ribonucleotide reductase-like IF561_03455 IPR033909 Ribonucleotide reductase small subunit IF561_03455 IPR030475 Ribonucleotide reductase small subunit, acitve site IF561_03455 IPR000358 Ribonucleotide reductase small subunit family IF561_03460 IPR005144 ATP-cone domain IF561_03460 IPR000788 Ribonucleotide reductase large subunit, C-terminal IF561_03460 IPR013346 Ribonucleotide reductase, class I , alpha subunit IF561_03460 IPR013509 Ribonucleotide reductase large subunit, N-terminal IF561_03460 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IF561_03460 IPR039718 Ribonucleoside-diphosphate reductase large subunit IF561_03465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_03465 IPR010233 Ubiquinone biosynthesis O-methyltransferase IF561_03470 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IF561_03470 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IF561_03470 IPR005743 DNA gyrase, subunit A IF561_03470 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IF561_03470 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IF561_03470 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IF561_03470 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IF561_03485 IPR036280 Multiheme cytochrome superfamily IF561_03485 IPR003321 Cytochrome c552 IF561_03485 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit IF561_03485 IPR011031 Multihaem cytochrome IF561_03495 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_03495 IPR017567 Cytochrome c nitrite reductase, Fe-S protein IF561_03495 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_03495 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_03500 IPR017566 NrfD IF561_03500 IPR005614 NrfD family IF561_03505 IPR003567 Cytochrome c-type biogenesis protein IF561_03505 IPR003570 Cytochrome c-type biogenesis protein NrfE IF561_03505 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE IF561_03505 IPR002541 Cytochrome c assembly protein IF561_03505 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal IF561_03505 IPR003568 Cytochrome c-type biogenesis protein CcmF IF561_03510 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE IF561_03510 IPR036249 Thioredoxin-like superfamily IF561_03510 IPR017937 Thioredoxin, conserved site IF561_03510 IPR013766 Thioredoxin domain IF561_03510 IPR013740 Redoxin IF561_03515 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF IF561_03515 IPR013026 Tetratricopeptide repeat-containing domain IF561_03515 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_03515 IPR019734 Tetratricopeptide repeat IF561_03515 IPR005616 CcmH/CycL/Ccl2/NrfF family IF561_03515 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily IF561_03525 IPR032677 GTP cyclohydrolase II IF561_03525 IPR000926 GTP cyclohydrolase II, RibA IF561_03525 IPR036144 RibA-like superfamily IF561_03550 IPR038063 L,D-transpeptidase catalytic domain-like IF561_03550 IPR005490 L,D-transpeptidase catalytic domain IF561_03550 IPR002477 Peptidoglycan binding-like IF561_03550 IPR036365 PGBD-like superfamily IF561_03555 IPR010275 Protein of unknown function DUF882 IF561_03555 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IF561_03555 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_03560 IPR001279 Metallo-beta-lactamase IF561_03560 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IF561_03575 IPR026289 Solute binding protein, TakP-like IF561_03575 IPR041722 Alpha-keto acid binding periplasmic protein IF561_03575 IPR018389 TRAP transporter solute receptor DctP/TeaA IF561_03575 IPR038404 TRAP transporter solute receptor DctP superfamily IF561_03585 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IF561_03585 IPR004681 TRAP transporter large membrane protein DctM IF561_03590 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IF561_03590 IPR003594 Histidine kinase/HSP90-like ATPase IF561_03590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_03590 IPR033480 Single Cache domain 2 IF561_03590 IPR017171 Signal transduction histidine kinase, MctS IF561_03595 IPR000792 Transcription regulator LuxR, C-terminal IF561_03595 IPR001789 Signal transduction response regulator, receiver domain IF561_03595 IPR016032 Signal transduction response regulator, C-terminal effector IF561_03595 IPR011006 CheY-like superfamily IF561_03600 IPR000835 MarR-type HTH domain IF561_03600 IPR036390 Winged helix DNA-binding domain superfamily IF561_03600 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03605 IPR018093 BCCT transporter, conserved site IF561_03605 IPR000060 BCCT transporter family IF561_03610 IPR003660 HAMP domain IF561_03610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_03630 IPR015424 Pyridoxal phosphate-dependent transferase IF561_03630 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IF561_03630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_03630 IPR004839 Aminotransferase, class I/classII IF561_03630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_03630 IPR000796 Aspartate/other aminotransferase IF561_03645 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_03645 IPR036390 Winged helix DNA-binding domain superfamily IF561_03645 IPR015424 Pyridoxal phosphate-dependent transferase IF561_03645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_03645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_03645 IPR004839 Aminotransferase, class I/classII IF561_03645 IPR000524 Transcription regulator HTH, GntR IF561_03655 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IF561_03655 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_03655 IPR004522 Asparagine-tRNA ligase IF561_03655 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IF561_03655 IPR012340 Nucleic acid-binding, OB-fold IF561_03655 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_03660 IPR004090 Chemotaxis methyl-accepting receptor IF561_03660 IPR003660 HAMP domain IF561_03660 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_03660 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_03660 IPR000727 Target SNARE coiled-coil homology domain IF561_03665 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily IF561_03665 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family IF561_03675 IPR007024 BLUF domain IF561_03675 IPR001633 EAL domain IF561_03675 IPR035919 EAL domain superfamily IF561_03675 IPR036046 Acylphosphatase-like domain superfamily IF561_03680 IPR029009 Allosteric substrate binding domain superfamily IF561_03680 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form IF561_03680 IPR005130 Serine dehydratase-like, alpha subunit IF561_03680 IPR005131 Serine dehydratase beta chain IF561_03685 IPR018227 Amino acid/polyamine transporter 2 IF561_03685 IPR004694 Hydroxy amino acid transporter IF561_03690 IPR000059 NUDIX hydrolase, NudL, conserved site IF561_03690 IPR015797 NUDIX hydrolase-like domain superfamily IF561_03690 IPR023735 Uncharacterised nudix hydrolase NudL IF561_03690 IPR000086 NUDIX hydrolase domain IF561_03700 IPR005467 Histidine kinase domain IF561_03700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_03700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_03700 IPR003594 Histidine kinase/HSP90-like ATPase IF561_03700 IPR011006 CheY-like superfamily IF561_03700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_03700 IPR015387 LuxQ, periplasmic IF561_03700 IPR035965 PAS domain superfamily IF561_03700 IPR029151 Periplasmic sensor-like domain superfamily IF561_03700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_03700 IPR001789 Signal transduction response regulator, receiver domain IF561_03705 IPR019999 Anthranilate synthase component I-like IF561_03705 IPR005801 ADC synthase IF561_03705 IPR006805 Anthranilate synthase component I, N-terminal IF561_03705 IPR015890 Chorismate-utilising enzyme, C-terminal IF561_03705 IPR005802 Aminodeoxychorismate synthase, component I IF561_03720 IPR007413 Protein of unknown function DUF463, YcjX-like protein IF561_03725 IPR021147 Protein of unknown function DUF697 IF561_03725 IPR006507 Uncharacterised protein family UPF0283 IF561_03730 IPR025944 Sigma-54 interaction domain, conserved site IF561_03730 IPR000014 PAS domain IF561_03730 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_03730 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_03730 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_03730 IPR035965 PAS domain superfamily IF561_03730 IPR030828 TyrR family, helix-turn-helix domain IF561_03730 IPR009057 Homeobox-like domain superfamily IF561_03730 IPR002912 ACT domain IF561_03730 IPR003593 AAA+ ATPase domain IF561_03730 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_03735 IPR016181 Acyl-CoA N-acyltransferase IF561_03735 IPR000182 GNAT domain IF561_03750 IPR010998 Integrase/recombinase, N-terminal IF561_03750 IPR011010 DNA breaking-rejoining enzyme, catalytic core IF561_03750 IPR013762 Integrase-like, catalytic domain superfamily IF561_03750 IPR002104 Integrase, catalytic domain IF561_03750 IPR004107 Integrase, SAM-like, N-terminal IF561_03750 IPR011946 Integrase, integron-type IF561_03840 IPR025948 HTH-like domain IF561_03840 IPR001584 Integrase, catalytic core IF561_03840 IPR012337 Ribonuclease H-like superfamily IF561_03840 IPR036397 Ribonuclease H superfamily IF561_03880 IPR001584 Integrase, catalytic core IF561_03880 IPR036397 Ribonuclease H superfamily IF561_03880 IPR012337 Ribonuclease H-like superfamily IF561_03880 IPR025948 HTH-like domain IF561_03965 IPR012337 Ribonuclease H-like superfamily IF561_03965 IPR025948 HTH-like domain IF561_03965 IPR036397 Ribonuclease H superfamily IF561_03965 IPR001584 Integrase, catalytic core IF561_04030 IPR025668 Transposase DDE domain IF561_04045 IPR036397 Ribonuclease H superfamily IF561_04045 IPR012337 Ribonuclease H-like superfamily IF561_04045 IPR025948 HTH-like domain IF561_04045 IPR001584 Integrase, catalytic core IF561_04100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_04100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_04100 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_04115 IPR012337 Ribonuclease H-like superfamily IF561_04115 IPR036397 Ribonuclease H superfamily IF561_04115 IPR001584 Integrase, catalytic core IF561_04115 IPR025948 HTH-like domain IF561_04150 IPR016181 Acyl-CoA N-acyltransferase IF561_04150 IPR000182 GNAT domain IF561_04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_04235 IPR025669 AAA domain IF561_04310 IPR001584 Integrase, catalytic core IF561_04310 IPR025948 HTH-like domain IF561_04310 IPR036397 Ribonuclease H superfamily IF561_04310 IPR012337 Ribonuclease H-like superfamily IF561_04365 IPR012337 Ribonuclease H-like superfamily IF561_04365 IPR001584 Integrase, catalytic core IF561_04365 IPR025948 HTH-like domain IF561_04365 IPR036397 Ribonuclease H superfamily IF561_04405 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IF561_04410 IPR036651 Glutamine synthetase, N-terminal domain superfamily IF561_04410 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IF561_04410 IPR008146 Glutamine synthetase, catalytic domain IF561_04410 IPR027303 Glutamine synthetase, glycine-rich site IF561_04415 IPR029062 Class I glutamine amidotransferase-like IF561_04415 IPR017926 Glutamine amidotransferase IF561_04415 IPR011697 Peptidase C26 IF561_04420 IPR011051 RmlC-like cupin domain superfamily IF561_04420 IPR013096 Cupin 2, conserved barrel IF561_04420 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_04420 IPR001387 Cro/C1-type helix-turn-helix domain IF561_04420 IPR014710 RmlC-like jelly roll fold IF561_04425 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_04425 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_04425 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_04425 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_04425 IPR015590 Aldehyde dehydrogenase domain IF561_04425 IPR016161 Aldehyde/histidinol dehydrogenase IF561_04430 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_04430 IPR006076 FAD dependent oxidoreductase IF561_04435 IPR036526 Carbon-nitrogen hydrolase superfamily IF561_04435 IPR003010 Carbon-nitrogen hydrolase IF561_04440 IPR017754 Agmatine deiminase IF561_04440 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type IF561_04445 IPR015590 Aldehyde dehydrogenase domain IF561_04445 IPR010102 Succinate semialdehyde dehydrogenase IF561_04445 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_04445 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_04445 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_04445 IPR016161 Aldehyde/histidinol dehydrogenase IF561_04445 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_04450 IPR004632 4-aminobutyrate aminotransferase, bacterial IF561_04450 IPR005814 Aminotransferase class-III IF561_04450 IPR015424 Pyridoxal phosphate-dependent transferase IF561_04450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_04450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_04455 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable IF561_04455 IPR001667 DDH domain IF561_04455 IPR004097 DHHA2 domain IF561_04455 IPR038763 DHH phosphoesterase superfamily IF561_04455 IPR038222 DHHA2 domain superfamily IF561_04460 IPR001633 EAL domain IF561_04460 IPR035919 EAL domain superfamily IF561_04460 IPR016032 Signal transduction response regulator, C-terminal effector IF561_04460 IPR000792 Transcription regulator LuxR, C-terminal IF561_04460 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_04475 IPR009000 Translation protein, beta-barrel domain superfamily IF561_04475 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IF561_04475 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IF561_04475 IPR002318 Alanine-tRNA ligase, class IIc IF561_04475 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IF561_04475 IPR003156 DHHA1 domain IF561_04475 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IF561_04475 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IF561_04475 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IF561_04480 IPR018062 HTH domain AraC-type, conserved site IF561_04480 IPR020449 Transcription regulator HTH, AraC- type IF561_04480 IPR018060 DNA binding HTH domain, AraC-type IF561_04480 IPR009057 Homeobox-like domain superfamily IF561_04490 IPR000835 MarR-type HTH domain IF561_04490 IPR023187 Transcriptional regulator MarR-type, conserved site IF561_04490 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_04490 IPR036390 Winged helix DNA-binding domain superfamily IF561_04495 IPR038056 YjbR-like superfamily IF561_04495 IPR007351 Uncharacterised protein YjbR IF561_04505 IPR008173 Adenylyl cyclase CyaB IF561_04505 IPR033469 CYTH-like domain superfamily IF561_04505 IPR023577 CYTH domain IF561_04515 IPR001451 Hexapeptide repeat IF561_04515 IPR018357 Hexapeptide transferase, conserved site IF561_04515 IPR039369 Galactoside O-acetyltransferase LacA-like IF561_04515 IPR024688 Maltose/galactoside acetyltransferase IF561_04515 IPR011004 Trimeric LpxA-like superfamily IF561_04530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_04530 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_04530 IPR001789 Signal transduction response regulator, receiver domain IF561_04530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_04530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_04530 IPR003660 HAMP domain IF561_04530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_04530 IPR003594 Histidine kinase/HSP90-like ATPase IF561_04530 IPR036641 HPT domain superfamily IF561_04530 IPR011006 CheY-like superfamily IF561_04530 IPR005467 Histidine kinase domain IF561_04530 IPR019247 Histidine kinase BarA, N-terminal IF561_04535 IPR001633 EAL domain IF561_04535 IPR005330 MHYT domain IF561_04535 IPR000160 GGDEF domain IF561_04535 IPR029787 Nucleotide cyclase IF561_04535 IPR035919 EAL domain superfamily IF561_04545 IPR013360 Pilus biogenesis/stability type IV, PilW IF561_04545 IPR019734 Tetratricopeptide repeat IF561_04545 IPR013026 Tetratricopeptide repeat-containing domain IF561_04545 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_04550 IPR033752 MetA family IF561_04550 IPR029062 Class I glutamine amidotransferase-like IF561_04550 IPR005697 Homoserine O-succinyltransferase MetA IF561_04560 IPR002293 Amino acid/polyamine transporter I IF561_04565 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase IF561_04565 IPR004960 Bacterial lipid A biosynthesis acyltransferase IF561_04570 IPR001333 Peptidase M32, carboxypeptidase Taq IF561_04575 IPR001123 Amino acid exporter protein, LeuE-type IF561_04585 IPR001463 Sodium:alanine symporter IF561_04610 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_04610 IPR012160 Lipoteichoic acid synthase-like IF561_04610 IPR000917 Sulfatase, N-terminal IF561_04615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_04615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_04615 IPR005467 Histidine kinase domain IF561_04615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_04615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_04615 IPR003594 Histidine kinase/HSP90-like ATPase IF561_04615 IPR013727 Two-component sensor kinase, N-terminal IF561_04620 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_04620 IPR039420 Transcriptional regulatory protein WalR-like IF561_04620 IPR001789 Signal transduction response regulator, receiver domain IF561_04620 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_04620 IPR011006 CheY-like superfamily IF561_04630 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_04630 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_04630 IPR036291 NAD(P)-binding domain superfamily IF561_04630 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_04640 IPR042099 AMP-dependent synthetase-like superfamily IF561_04640 IPR000873 AMP-dependent synthetase/ligase IF561_04640 IPR020845 AMP-binding, conserved site IF561_04650 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain IF561_04655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_04655 IPR035906 MetI-like superfamily IF561_04660 IPR003593 AAA+ ATPase domain IF561_04660 IPR003439 ABC transporter-like IF561_04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_04660 IPR017871 ABC transporter, conserved site IF561_04660 IPR005892 Glycine betaine transport ATP-binding subunit IF561_04660 IPR000644 CBS domain IF561_04675 IPR000060 BCCT transporter family IF561_04680 IPR016181 Acyl-CoA N-acyltransferase IF561_04680 IPR012772 L-2,4-diaminobutyric acid acetyltransferase IF561_04680 IPR000182 GNAT domain IF561_04685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_04685 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_04685 IPR015424 Pyridoxal phosphate-dependent transferase IF561_04685 IPR012773 Ectoine biosynthetic protein IF561_04685 IPR005814 Aminotransferase class-III IF561_04685 IPR004637 2,4-diaminobutyrate 4-transaminase IF561_04690 IPR010462 Ectoine synthase IF561_04690 IPR014710 RmlC-like jelly roll fold IF561_04690 IPR011051 RmlC-like cupin domain superfamily IF561_04695 IPR027795 CASTOR, ACT domain IF561_04695 IPR036393 Acetylglutamate kinase-like superfamily IF561_04695 IPR001048 Aspartate/glutamate/uridylate kinase IF561_04700 IPR009056 Cytochrome c-like domain IF561_04700 IPR036909 Cytochrome c-like domain superfamily IF561_04700 IPR004852 Di-haem cytochrome c peroxidase IF561_04700 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase IF561_04715 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_04730 IPR029151 Periplasmic sensor-like domain superfamily IF561_04730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_04730 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IF561_04730 IPR033463 Single cache domain 3 IF561_04730 IPR039506 SpoOB, alpha-helical domain IF561_04730 IPR035965 PAS domain superfamily IF561_04730 IPR013767 PAS fold IF561_04730 IPR005467 Histidine kinase domain IF561_04730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_04730 IPR003594 Histidine kinase/HSP90-like ATPase IF561_04730 IPR000014 PAS domain IF561_04735 IPR011006 CheY-like superfamily IF561_04735 IPR024187 Signal transduction response regulator, citrate/malate metabolism IF561_04735 IPR001789 Signal transduction response regulator, receiver domain IF561_04735 IPR028141 Transcriptional regulator IF561_04740 IPR001282 Glucose-6-phosphate dehydrogenase IF561_04740 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal IF561_04740 IPR019796 Glucose-6-phosphate dehydrogenase, active site IF561_04740 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding IF561_04740 IPR036291 NAD(P)-binding domain superfamily IF561_04745 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase IF561_04745 IPR037171 NagB/RpiA transferase-like IF561_04745 IPR039104 6-Phosphogluconolactonase IF561_04745 IPR005900 6-phosphogluconolactonase, DevB-type IF561_04750 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_04750 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_04750 IPR006114 6-phosphogluconate dehydrogenase, C-terminal IF561_04750 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating IF561_04750 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IF561_04750 IPR006184 6-phosphogluconate-binding site IF561_04750 IPR036291 NAD(P)-binding domain superfamily IF561_04750 IPR006183 6-phosphogluconate dehydrogenase IF561_04765 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_04765 IPR009057 Homeobox-like domain superfamily IF561_04765 IPR002197 DNA binding HTH domain, Fis-type IF561_04765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_04765 IPR029016 GAF-like domain superfamily IF561_04765 IPR003018 GAF domain IF561_04765 IPR003593 AAA+ ATPase domain IF561_04765 IPR025944 Sigma-54 interaction domain, conserved site IF561_04765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_04765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_04770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_04770 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_04770 IPR016161 Aldehyde/histidinol dehydrogenase IF561_04770 IPR015590 Aldehyde dehydrogenase domain IF561_04770 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_04770 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_04790 IPR009057 Homeobox-like domain superfamily IF561_04790 IPR020449 Transcription regulator HTH, AraC- type IF561_04790 IPR018062 HTH domain AraC-type, conserved site IF561_04790 IPR014710 RmlC-like jelly roll fold IF561_04790 IPR018060 DNA binding HTH domain, AraC-type IF561_04805 IPR003522 Type III secretion system outer membrane pore YscC/HrcC IF561_04805 IPR005644 NolW-like IF561_04805 IPR038591 NolW-like superfamily IF561_04805 IPR004846 Type II/III secretion system IF561_04805 IPR004845 Type II secretion system GspD, conserved site IF561_04810 IPR000253 Forkhead-associated (FHA) domain IF561_04810 IPR012843 Type III secretion system YscD/HrpQ IF561_04810 IPR032030 YscD, cytoplasmic domain IF561_04810 IPR032034 Yop protein translocation protein D, periplasmic domain IF561_04810 IPR008984 SMAD/FHA domain superfamily IF561_04820 IPR011841 Type III secretion system, needle protein IF561_04820 IPR021123 Type III secretion, needle-protein-like IF561_04820 IPR037203 Type III secretion, needle-protein-like superfamily IF561_04825 IPR013348 Type III secretion system YscG IF561_04825 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_04835 IPR012670 Type III secretion system, YscI/HrpB IF561_04840 IPR006182 Secretory protein YscJ/FliF IF561_04840 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ IF561_04850 IPR012842 Type III secretion system HrpE/YscL IF561_04850 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE IF561_04860 IPR003812 Fido domain IF561_04860 IPR036597 Fido-like domain superfamily IF561_04895 IPR000847 Transcription regulator HTH, LysR IF561_04895 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_04895 IPR036390 Winged helix DNA-binding domain superfamily IF561_04895 IPR005119 LysR, substrate-binding IF561_04905 IPR022742 Serine aminopeptidase, S33 IF561_04905 IPR029058 Alpha/Beta hydrolase fold IF561_04910 IPR029058 Alpha/Beta hydrolase fold IF561_04910 IPR022742 Serine aminopeptidase, S33 IF561_04915 IPR005119 LysR, substrate-binding IF561_04915 IPR000847 Transcription regulator HTH, LysR IF561_04915 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_04915 IPR036390 Winged helix DNA-binding domain superfamily IF561_04920 IPR006307 Type III exporter system, secretion apparatus protein BsaZ IF561_04920 IPR006135 Type III secretion system substrate exporter IF561_04920 IPR029025 Type III secretion system substrate exporter, C-terminal IF561_04925 IPR002010 Type III secretion system inner membrane R protein IF561_04925 IPR006304 Type III secretion protein SpaR/YscT IF561_04930 IPR002191 Bacterial export protein family 3 IF561_04930 IPR006306 Type III secretion protein HrpO IF561_04935 IPR005773 Yop virulence translocation protein R IF561_04935 IPR005838 Type III secretion system inner membrane P protein IF561_04940 IPR036429 SpoA-like superfamily IF561_04940 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO IF561_04940 IPR003283 Type III secretion system outer membrane, SpaO IF561_04940 IPR001543 Surface presentation of antigen (SpoA) IF561_04955 IPR003593 AAA+ ATPase domain IF561_04955 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IF561_04955 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_04955 IPR005714 ATPase, type III secretion system, FliI/YscN IF561_04955 IPR013380 ATPase, type III secretion system, H+-transporting IF561_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_04955 IPR040627 T3SS EscN ATPase, C-terminal IF561_04955 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_04960 IPR010812 Hypersensitivity response secretion-like, HrpJ IF561_04960 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC IF561_04965 IPR015144 Type III secretion system effector delivery regulator TyeA IF561_04965 IPR013351 Type III secretion system effector delivery regulator TyeA-related IF561_04965 IPR038347 TyeA superfamily IF561_04985 IPR042194 FHIPEP, domain 1 IF561_04985 IPR042193 FHIPEP, domain 3 IF561_04985 IPR042196 FHIPEP, domain 4 IF561_04985 IPR025505 FHIPEP conserved site IF561_04985 IPR001712 Type III secretion system FHIPEP IF561_04985 IPR006302 Type III secretion protein HrcV IF561_04990 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 IF561_04990 IPR013405 Type III secretion system regulator, LcrR IF561_04995 IPR009863 Type III secretion protein, LcrG IF561_05000 IPR005413 Low calcium response V antigen IF561_05000 IPR036139 Virulence-associated V antigen superfamily IF561_05005 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_05005 IPR013026 Tetratricopeptide repeat-containing domain IF561_05005 IPR011716 Tetratricopeptide TPR-3 IF561_05005 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup IF561_05005 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD IF561_05015 IPR008898 YopD-like IF561_05025 IPR002781 Transmembrane protein TauE-like IF561_05030 IPR002823 Protein of unknown function DUF112, transmembrane IF561_05055 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_05055 IPR040442 Pyruvate kinase-like domain superfamily IF561_05055 IPR012695 2-methylisocitrate lyase IF561_05055 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site IF561_05055 IPR039556 ICL/PEPM domain IF561_05060 IPR016142 Citrate synthase-like, large alpha subdomain IF561_05060 IPR016143 Citrate synthase-like, small alpha subdomain IF561_05060 IPR036969 Citrate synthase superfamily IF561_05060 IPR024176 Citrate synthase, bacterial-type IF561_05060 IPR011278 2-methylcitrate synthase/citrate synthase type I IF561_05060 IPR019810 Citrate synthase active site IF561_05060 IPR002020 Citrate synthase IF561_05065 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IF561_05065 IPR006249 Aconitase/Iron-responsive element-binding protein 2 IF561_05065 IPR036008 Aconitase, iron-sulfur domain IF561_05065 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IF561_05065 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IF561_05065 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IF561_05065 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent IF561_05070 IPR012709 2-methyl-aconitate isomerase PrpF IF561_05070 IPR007400 PrpF protein IF561_05075 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain IF561_05075 IPR025110 AMP-binding enzyme, C-terminal domain IF561_05075 IPR020845 AMP-binding, conserved site IF561_05075 IPR000873 AMP-dependent synthetase/ligase IF561_05075 IPR042099 AMP-dependent synthetase-like superfamily IF561_05085 IPR018114 Serine proteases, trypsin family, histidine active site IF561_05085 IPR033116 Serine proteases, trypsin family, serine active site IF561_05085 IPR009003 Peptidase S1, PA clan IF561_05085 IPR001314 Peptidase S1A, chymotrypsin family IF561_05085 IPR001254 Serine proteases, trypsin domain IF561_05095 IPR000150 Cof family IF561_05095 IPR006379 HAD-superfamily hydrolase, subfamily IIB IF561_05095 IPR036412 HAD-like superfamily IF561_05095 IPR023214 HAD superfamily IF561_05100 IPR013785 Aldolase-type TIM barrel IF561_05100 IPR007197 Radical SAM IF561_05100 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria IF561_05100 IPR024924 7-carboxy-7-deazaguanine synthase-like IF561_05105 IPR018317 Queuosine biosynthesis protein QueC IF561_05105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_05110 IPR033424 Membrane-associated sensor domain IF561_05110 IPR000160 GGDEF domain IF561_05110 IPR029787 Nucleotide cyclase IF561_05120 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_05120 IPR006664 Outer membrane protein, bacterial IF561_05120 IPR006665 OmpA-like domain IF561_05120 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_05120 IPR028974 TSP type-3 repeat IF561_05120 IPR008722 Outer membrane porin F, N-terminal IF561_05120 IPR036737 OmpA-like domain superfamily IF561_05135 IPR006665 OmpA-like domain IF561_05135 IPR006664 Outer membrane protein, bacterial IF561_05135 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_05135 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_05135 IPR028974 TSP type-3 repeat IF561_05135 IPR008722 Outer membrane porin F, N-terminal IF561_05135 IPR036737 OmpA-like domain superfamily IF561_05150 IPR002478 PUA domain IF561_05150 IPR036974 PUA domain superfamily IF561_05150 IPR041532 RlmI, PUA-like domain IF561_05150 IPR023542 rRNA large subunit methyltransferase I IF561_05150 IPR019614 S-adenosylmethionine-dependent methyltransferase IF561_05150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_05150 IPR015947 PUA-like superfamily IF561_05155 IPR029151 Periplasmic sensor-like domain superfamily IF561_05155 IPR033479 Double Cache domain 1 IF561_05155 IPR003660 HAMP domain IF561_05155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_05160 IPR020456 Acylphosphatase IF561_05160 IPR001792 Acylphosphatase-like domain IF561_05160 IPR036046 Acylphosphatase-like domain superfamily IF561_05160 IPR017968 Acylphosphatase, conserved site IF561_05165 IPR007453 Sulphur transfer protein DsrC/TusE IF561_05165 IPR042072 DsrC-like protein, C-terminal domain IF561_05165 IPR025526 DsrC-like domain superfamily IF561_05175 IPR006214 Bax inhibitor 1-related IF561_05180 IPR017871 ABC transporter, conserved site IF561_05180 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IF561_05180 IPR003593 AAA+ ATPase domain IF561_05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05180 IPR003439 ABC transporter-like IF561_05185 IPR035906 MetI-like superfamily IF561_05185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_05185 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_05190 IPR035906 MetI-like superfamily IF561_05190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_05190 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_05195 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter IF561_05195 IPR018313 Solute-binding protein family 3, conserved site IF561_05195 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_05200 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IF561_05200 IPR019478 Sirohaem synthase, dimerisation domain IF561_05200 IPR028281 Siroheme synthase, central domain IF561_05200 IPR012409 Sirohaem synthase IF561_05200 IPR037115 Sirohaem synthase, dimerisation domain superfamily IF561_05200 IPR006367 Sirohaem synthase, N-terminal IF561_05200 IPR006366 Uroporphyrin-III C-methyltransferase IF561_05200 IPR014776 Tetrapyrrole methylase, subdomain 2 IF561_05200 IPR014777 Tetrapyrrole methylase, subdomain 1 IF561_05200 IPR035996 Tetrapyrrole methylase superfamily IF561_05200 IPR000878 Tetrapyrrole methylase IF561_05200 IPR036291 NAD(P)-binding domain superfamily IF561_05205 IPR036183 YajQ-like superfamily IF561_05205 IPR035570 UPF0234, N-terminal IF561_05205 IPR035571 UPF0234-like, C-terminal IF561_05205 IPR007551 Protein of unknown function DUF520 IF561_05210 IPR006218 DAHP synthetase I/KDSA IF561_05210 IPR013785 Aldolase-type TIM barrel IF561_05210 IPR006219 DHAP synthase, class 1 IF561_05230 IPR011023 Nop2p IF561_05230 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain IF561_05230 IPR023267 RNA (C5-cytosine) methyltransferase IF561_05230 IPR023545 rRNA small subunit methyltransferase F IF561_05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_05230 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal IF561_05230 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IF561_05230 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IF561_05235 IPR003399 Mce/MlaD IF561_05240 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type IF561_05240 IPR007498 Intermembrane transport protein PqiA-like IF561_05240 IPR011031 Multihaem cytochrome IF561_05245 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_05245 IPR017871 ABC transporter, conserved site IF561_05245 IPR003439 ABC transporter-like IF561_05245 IPR011527 ABC transporter type 1, transmembrane domain IF561_05245 IPR003593 AAA+ ATPase domain IF561_05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05245 IPR039421 Type I protein exporter IF561_05250 IPR000614 Free Met sulfoxide reductase conserved site IF561_05250 IPR029016 GAF-like domain superfamily IF561_05250 IPR003018 GAF domain IF561_05255 IPR023529 RNA chaperone ProQ IF561_05255 IPR016103 ProQ/FinO domain IF561_05255 IPR036442 ProQ/FinO domain superfamily IF561_05255 IPR035236 RNA chaperone ProQ, C-terminal IF561_05260 IPR029045 ClpP/crotonase-like domain superfamily IF561_05260 IPR001478 PDZ domain IF561_05260 IPR036034 PDZ superfamily IF561_05260 IPR004447 C-terminal-processing peptidase S41A IF561_05260 IPR005151 Tail specific protease IF561_05260 IPR040573 Tail specific protease, N-terminal domain IF561_05260 IPR020992 Tail specific protease, C-terminal IF561_05270 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal IF561_05270 IPR012779 Peptidase M1, alanyl aminopeptidase IF561_05270 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily IF561_05270 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold IF561_05270 IPR042097 Aminopeptidase N-like , N-terminal IF561_05270 IPR027268 Peptidase M4/M1, CTD superfamily IF561_05270 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily IF561_05270 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase IF561_05270 IPR014782 Peptidase M1, membrane alanine aminopeptidase IF561_05280 IPR007780 NAD-glutamate dehydrogenase, bacteria IF561_05280 IPR036291 NAD(P)-binding domain superfamily IF561_05280 IPR028971 NAD-glutamate dehydrogenase IF561_05285 IPR013785 Aldolase-type TIM barrel IF561_05285 IPR005720 Dihydroorotate dehydrogenase domain IF561_05285 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 IF561_05285 IPR005719 Dihydroorotate dehydrogenase, class 2 IF561_05285 IPR001295 Dihydroorotate dehydrogenase, conserved site IF561_05290 IPR009809 Cell division protein ZapC IF561_05295 IPR017244 Ribosomal RNA large subunit methyltransferase K/L IF561_05295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_05295 IPR000241 Putative RNA methylase domain IF561_05295 IPR019614 S-adenosylmethionine-dependent methyltransferase IF561_05295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_05295 IPR004114 THUMP domain IF561_05305 IPR032781 ABC-transporter extension domain IF561_05305 IPR032524 ABC transporter Uup, C-terminal IF561_05305 IPR003593 AAA+ ATPase domain IF561_05305 IPR017871 ABC transporter, conserved site IF561_05305 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IF561_05305 IPR003439 ABC transporter-like IF561_05305 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05315 IPR007040 Ribosome modulation factor IF561_05315 IPR023200 Ribosome modulation factor domain superfamily IF561_05320 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA IF561_05320 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IF561_05320 IPR029069 HotDog domain superfamily IF561_05325 IPR027065 Lon protease IF561_05325 IPR041699 Lon protease, AAA domain IF561_05325 IPR008269 Peptidase S16, Lon proteolytic domain IF561_05325 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_05325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_05330 IPR038339 MatP, N-terminal domain superfamily IF561_05330 IPR035087 MatP, N-terminal IF561_05330 IPR035375 MatP, C-terminal ribbon-helix-helix domain IF561_05330 IPR013321 Arc-type ribbon-helix-helix IF561_05330 IPR009390 Macrodomain Ter protein, MatP IF561_05485 IPR035965 PAS domain superfamily IF561_05485 IPR015387 LuxQ, periplasmic IF561_05485 IPR029151 Periplasmic sensor-like domain superfamily IF561_05485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_05485 IPR005467 Histidine kinase domain IF561_05485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_05485 IPR003594 Histidine kinase/HSP90-like ATPase IF561_05485 IPR011006 CheY-like superfamily IF561_05485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_05485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_05485 IPR001789 Signal transduction response regulator, receiver domain IF561_05500 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IF561_05500 IPR000883 Cytochrome c oxidase subunit I IF561_05500 IPR004677 Cytochrome c oxidase cbb3-type, subunit I IF561_05500 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IF561_05500 IPR023616 Cytochrome c oxidase-like, subunit I domain IF561_05515 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal IF561_05515 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily IF561_05515 IPR009056 Cytochrome c-like domain IF561_05515 IPR036909 Cytochrome c-like domain superfamily IF561_05515 IPR008168 Cytochrome c, class IC IF561_05515 IPR004678 Cytochrome c oxidase cbb3-type, subunit III IF561_05525 IPR006121 Heavy metal-associated domain, HMA IF561_05525 IPR001757 P-type ATPase IF561_05525 IPR027256 P-type ATPase, subfamily IB IF561_05525 IPR036163 Heavy metal-associated domain superfamily IF561_05525 IPR017969 Heavy-metal-associated, conserved site IF561_05525 IPR023214 HAD superfamily IF561_05525 IPR036412 HAD-like superfamily IF561_05525 IPR023298 P-type ATPase, transmembrane domain superfamily IF561_05525 IPR018303 P-type ATPase, phosphorylation site IF561_05525 IPR023299 P-type ATPase, cytoplasmic domain N IF561_05525 IPR008250 P-type ATPase, A domain superfamily IF561_05540 IPR018490 Cyclic nucleotide-binding-like IF561_05540 IPR000595 Cyclic nucleotide-binding domain IF561_05540 IPR012318 Crp-type HTH domain IF561_05540 IPR014710 RmlC-like jelly roll fold IF561_05540 IPR018335 Transcription regulator HTH, Crp-type, conserved site IF561_05540 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_05540 IPR036390 Winged helix DNA-binding domain superfamily IF561_05545 IPR006016 UspA IF561_05550 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal IF561_05550 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase IF561_05550 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type IF561_05550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_05570 IPR017871 ABC transporter, conserved site IF561_05570 IPR008995 Molybdate/tungstate binding, C-terminal IF561_05570 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit IF561_05570 IPR013611 Transport-associated OB, type 2 IF561_05570 IPR003439 ABC transporter-like IF561_05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05570 IPR003593 AAA+ ATPase domain IF561_05570 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA IF561_05575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_05575 IPR035906 MetI-like superfamily IF561_05580 IPR035906 MetI-like superfamily IF561_05580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_05585 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein IF561_05585 IPR006059 Bacterial extracellular solute-binding protein IF561_05590 IPR006059 Bacterial extracellular solute-binding protein IF561_05590 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein IF561_05595 IPR026590 Sirtuin family, catalytic core domain IF561_05595 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_05595 IPR003000 Sirtuin family IF561_05595 IPR026591 Sirtuin, catalytic core small domain superfamily IF561_05595 IPR027546 Sirtuin, class III IF561_05605 IPR029020 Ammonium/urea transporter IF561_05605 IPR001905 Ammonium transporter IF561_05605 IPR018047 Ammonium transporter, conserved site IF561_05605 IPR024041 Ammonium transporter AmtB-like domain IF561_05615 IPR022385 Rhs repeat-associated core IF561_05615 IPR006530 YD repeat IF561_05615 IPR031325 RHS repeat IF561_05615 IPR001826 RHS protein IF561_05630 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_05630 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_05630 IPR000813 7Fe ferredoxin IF561_05635 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_05635 IPR006443 Formate dehydrogenase-N, alpha subunit IF561_05635 IPR006657 Molybdopterin dinucleotide-binding domain IF561_05635 IPR006656 Molybdopterin oxidoreductase IF561_05635 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_05635 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IF561_05635 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IF561_05635 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_05645 IPR036411 TorD-like superfamily IF561_05645 IPR036386 HscB, C-terminal domain superfamily IF561_05645 IPR023069 Chaperone TorD IF561_05645 IPR020945 DMSO/Nitrate reductase chaperone IF561_05665 IPR016193 Cytidine deaminase-like IF561_05665 IPR003786 Sulfur carrier protein FdhD IF561_05670 IPR003593 AAA+ ATPase domain IF561_05670 IPR032781 ABC-transporter extension domain IF561_05670 IPR003439 ABC transporter-like IF561_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05675 IPR029151 Periplasmic sensor-like domain superfamily IF561_05675 IPR003594 Histidine kinase/HSP90-like ATPase IF561_05675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_05675 IPR005467 Histidine kinase domain IF561_05675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_05675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_05675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_05680 IPR011006 CheY-like superfamily IF561_05680 IPR003593 AAA+ ATPase domain IF561_05680 IPR009057 Homeobox-like domain superfamily IF561_05680 IPR002197 DNA binding HTH domain, Fis-type IF561_05680 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05680 IPR001789 Signal transduction response regulator, receiver domain IF561_05680 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_05680 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_05680 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_05680 IPR025944 Sigma-54 interaction domain, conserved site IF561_05685 IPR024370 PBP domain IF561_05690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_05690 IPR035906 MetI-like superfamily IF561_05695 IPR013611 Transport-associated OB, type 2 IF561_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05695 IPR015853 ABC transporter, ferric cation import, FbpC IF561_05695 IPR008995 Molybdate/tungstate binding, C-terminal IF561_05695 IPR003439 ABC transporter-like IF561_05695 IPR003593 AAA+ ATPase domain IF561_05695 IPR017871 ABC transporter, conserved site IF561_05700 IPR025877 MobA-like NTP transferase IF561_05700 IPR013482 Molybdenum cofactor guanylyltransferase IF561_05700 IPR029044 Nucleotide-diphospho-sugar transferases IF561_05705 IPR036425 MoaB/Mog-like domain superfamily IF561_05705 IPR001453 MoaB/Mog domain IF561_05705 IPR008284 Molybdenum cofactor biosynthesis, conserved site IF561_05705 IPR038987 Molybdopterin biosynthesis protein MoeA-like IF561_05705 IPR005111 MoeA, C-terminal, domain IV IF561_05705 IPR036688 MoeA, C-terminal, domain IV superfamily IF561_05705 IPR005110 MoeA, N-terminal and linker domain IF561_05705 IPR036135 MoeA, N-terminal and linker domain superfamily IF561_05715 IPR000600 ROK family IF561_05715 IPR023505 N-acetyl-D-glucosamine kinase IF561_05720 IPR039262 DTW domain-containing protein 2 IF561_05720 IPR005636 DTW IF561_05750 IPR003660 HAMP domain IF561_05750 IPR029151 Periplasmic sensor-like domain superfamily IF561_05750 IPR004090 Chemotaxis methyl-accepting receptor IF561_05750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_05750 IPR033463 Single cache domain 3 IF561_05755 IPR000064 Endopeptidase, NLPC/P60 domain IF561_05755 IPR038765 Papain-like cysteine peptidase superfamily IF561_05765 IPR000160 GGDEF domain IF561_05765 IPR007894 MASE2 IF561_05765 IPR029787 Nucleotide cyclase IF561_05770 IPR035909 Methylesterase CheB, C-terminal IF561_05770 IPR011006 CheY-like superfamily IF561_05770 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase IF561_05770 IPR001789 Signal transduction response regulator, receiver domain IF561_05770 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type IF561_05775 IPR016477 Fructosamine/Ketosamine-3-kinase IF561_05775 IPR011009 Protein kinase-like domain superfamily IF561_05785 IPR017938 Riboflavin synthase-like beta-barrel IF561_05785 IPR026017 Lumazine-binding domain IF561_05785 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IF561_05785 IPR001783 Lumazine-binding protein IF561_05790 IPR002528 Multi antimicrobial extrusion protein IF561_05800 IPR029319 DNA ligase, OB-like domain IF561_05800 IPR012340 Nucleic acid-binding, OB-fold IF561_05800 IPR016059 DNA ligase, ATP-dependent, conserved site IF561_05800 IPR012310 DNA ligase, ATP-dependent, central IF561_05805 IPR003658 Anti-sigma factor antagonist IF561_05805 IPR014237 Anti-sigma F factor antagonist IF561_05805 IPR002645 STAS domain IF561_05805 IPR036513 STAS domain superfamily IF561_05815 IPR003715 Polysaccharide export protein IF561_05815 IPR019554 Soluble ligand binding domain IF561_05830 IPR025944 Sigma-54 interaction domain, conserved site IF561_05830 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_05830 IPR001789 Signal transduction response regulator, receiver domain IF561_05830 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_05830 IPR009057 Homeobox-like domain superfamily IF561_05830 IPR011006 CheY-like superfamily IF561_05830 IPR003593 AAA+ ATPase domain IF561_05830 IPR002197 DNA binding HTH domain, Fis-type IF561_05830 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05835 IPR001296 Glycosyl transferase, family 1 IF561_05835 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IF561_05840 IPR001296 Glycosyl transferase, family 1 IF561_05840 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IF561_05870 IPR001296 Glycosyl transferase, family 1 IF561_05870 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IF561_05870 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA IF561_05875 IPR001173 Glycosyltransferase 2-like IF561_05875 IPR029044 Nucleotide-diphospho-sugar transferases IF561_05875 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA IF561_05880 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IF561_05880 IPR003362 Bacterial sugar transferase IF561_05890 IPR000060 BCCT transporter family IF561_05890 IPR018093 BCCT transporter, conserved site IF561_05905 IPR010222 RNA helicase HrpA IF561_05905 IPR024590 RNA helicase HrpA, C-terminal IF561_05905 IPR001650 Helicase, C-terminal IF561_05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_05905 IPR007502 Helicase-associated domain IF561_05905 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_05905 IPR003593 AAA+ ATPase domain IF561_05905 IPR011709 Domain of unknown function DUF1605 IF561_05905 IPR011545 DEAD/DEAH box helicase domain IF561_05910 IPR003680 Flavodoxin-like fold IF561_05910 IPR029039 Flavoprotein-like superfamily IF561_05910 IPR023048 NADH-azoreductase, FMN-dependent IF561_05920 IPR026269 Tat proofreading chaperone DmsD-type IF561_05920 IPR028611 Tat proofreading chaperone DmsD IF561_05920 IPR020945 DMSO/Nitrate reductase chaperone IF561_05920 IPR036411 TorD-like superfamily IF561_05925 IPR007059 DMSO reductase anchor subunit (DmsC) IF561_05930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_05930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_05930 IPR014297 Dimethylsulphoxide reductase, chain B IF561_05935 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IF561_05935 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IF561_05935 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IF561_05935 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_05935 IPR006657 Molybdopterin dinucleotide-binding domain IF561_05935 IPR006656 Molybdopterin oxidoreductase IF561_05935 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_05935 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_05935 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE IF561_05965 IPR033416 Periplasmic sensor domain CHASE7 IF561_05965 IPR000160 GGDEF domain IF561_05965 IPR029787 Nucleotide cyclase IF561_05975 IPR012725 Chaperone DnaK IF561_05975 IPR018181 Heat shock protein 70, conserved site IF561_05975 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IF561_05975 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IF561_05975 IPR013126 Heat shock protein 70 family IF561_05980 IPR013126 Heat shock protein 70 family IF561_05980 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IF561_05980 IPR018181 Heat shock protein 70, conserved site IF561_05980 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IF561_05980 IPR012725 Chaperone DnaK IF561_06005 IPR011527 ABC transporter type 1, transmembrane domain IF561_06005 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_06005 IPR003439 ABC transporter-like IF561_06005 IPR017871 ABC transporter, conserved site IF561_06005 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06005 IPR039421 Type I protein exporter IF561_06005 IPR003593 AAA+ ATPase domain IF561_06010 IPR011527 ABC transporter type 1, transmembrane domain IF561_06010 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_06010 IPR003439 ABC transporter-like IF561_06010 IPR017871 ABC transporter, conserved site IF561_06010 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06010 IPR039421 Type I protein exporter IF561_06010 IPR003593 AAA+ ATPase domain IF561_06030 IPR018227 Amino acid/polyamine transporter 2 IF561_06030 IPR013061 Tryptophan/tryrosine permease, conserved site IF561_06030 IPR013059 Tryptophan/tyrosine transporter IF561_06035 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IF561_06035 IPR018211 Alcohol dehydrogenase, iron-type, conserved site IF561_06035 IPR039697 Iron-type alcohol dehydrogenase-like IF561_06040 IPR006675 HDIG domain IF561_06040 IPR037522 HD-GYP domain IF561_06040 IPR003607 HD/PDEase domain IF561_06040 IPR006674 HD domain IF561_06090 IPR010263 Type VI secretion protein, VC_A0114 IF561_06120 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_06120 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_06120 IPR019888 Transcription regulator AsnC-type IF561_06120 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_06120 IPR000485 AsnC-type HTH domain IF561_06120 IPR011991 ArsR-like helix-turn-helix domain IF561_06120 IPR036390 Winged helix DNA-binding domain superfamily IF561_06120 IPR011008 Dimeric alpha-beta barrel IF561_06130 IPR010272 Type VI secretion system, TssF-like IF561_06140 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath IF561_06155 IPR011009 Protein kinase-like domain superfamily IF561_06155 IPR000719 Protein kinase domain IF561_06155 IPR017441 Protein kinase, ATP binding site IF561_06155 IPR008271 Serine/threonine-protein kinase, active site IF561_06155 IPR023507 Serine/threonine protein kinase PknD IF561_06155 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_06180 IPR037026 Vgr protein, OB-fold domain superfamily IF561_06180 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IF561_06180 IPR006531 Gp5 N-terminal IF561_06180 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IF561_06185 IPR036624 Hcp1-like superfamily IF561_06185 IPR008514 Type VI secretion system effector, Hcp IF561_06190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06190 IPR041546 ClpA/ClpB, AAA lid domain IF561_06190 IPR018368 ClpA/B, conserved site 1 IF561_06190 IPR001270 ClpA/B family IF561_06190 IPR004176 Clp, N-terminal IF561_06190 IPR017729 Type VI secretion system, ATPase ClpV1 IF561_06190 IPR019489 Clp ATPase, C-terminal IF561_06190 IPR003959 ATPase, AAA-type, core IF561_06190 IPR003593 AAA+ ATPase domain IF561_06190 IPR036628 Clp, N-terminal domain superfamily IF561_06195 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_06195 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_06195 IPR001789 Signal transduction response regulator, receiver domain IF561_06195 IPR025944 Sigma-54 interaction domain, conserved site IF561_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06195 IPR002197 DNA binding HTH domain, Fis-type IF561_06195 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_06195 IPR011006 CheY-like superfamily IF561_06195 IPR003593 AAA+ ATPase domain IF561_06195 IPR009057 Homeobox-like domain superfamily IF561_06220 IPR011055 Duplicated hybrid motif IF561_06220 IPR018392 LysM domain IF561_06220 IPR013731 Opacity-associated protein A, N-terminal IF561_06220 IPR016047 Peptidase M23 IF561_06225 IPR005496 Integral membrane protein TerC IF561_06235 IPR007197 Radical SAM IF561_06235 IPR001989 Radical-activating enzyme, conserved site IF561_06235 IPR012839 Organic radical enzyme activase IF561_06235 IPR034457 Organic radical-activating enzymes IF561_06235 IPR013785 Aldolase-type TIM barrel IF561_06235 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_06235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_06235 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW IF561_06240 IPR016905 Glycyl radical enzyme, HI0521, predicted IF561_06245 IPR001123 Amino acid exporter protein, LeuE-type IF561_06245 IPR004778 Homoserine/Threonine efflux protein IF561_06250 IPR021812 Protein of unknown function DUF3391 IF561_06250 IPR006674 HD domain IF561_06250 IPR037522 HD-GYP domain IF561_06250 IPR006675 HDIG domain IF561_06250 IPR003607 HD/PDEase domain IF561_06255 IPR035965 PAS domain superfamily IF561_06255 IPR029787 Nucleotide cyclase IF561_06255 IPR001633 EAL domain IF561_06255 IPR035919 EAL domain superfamily IF561_06255 IPR000160 GGDEF domain IF561_06255 IPR005330 MHYT domain IF561_06260 IPR011006 CheY-like superfamily IF561_06260 IPR009057 Homeobox-like domain superfamily IF561_06260 IPR002197 DNA binding HTH domain, Fis-type IF561_06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06260 IPR001789 Signal transduction response regulator, receiver domain IF561_06260 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_06260 IPR025944 Sigma-54 interaction domain, conserved site IF561_06265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_06265 IPR005467 Histidine kinase domain IF561_06265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_06265 IPR003594 Histidine kinase/HSP90-like ATPase IF561_06265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_06265 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_06265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_06270 IPR031312 Sodium/sulphate symporter, conserved site IF561_06270 IPR001898 Solute carrier family 13 IF561_06285 IPR023086 Phosphoglycerate mutase, GpmB, probable IF561_06285 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site IF561_06285 IPR029033 Histidine phosphatase superfamily IF561_06285 IPR013078 Histidine phosphatase superfamily, clade-1 IF561_06305 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_06305 IPR000847 Transcription regulator HTH, LysR IF561_06305 IPR036390 Winged helix DNA-binding domain superfamily IF561_06305 IPR005119 LysR, substrate-binding IF561_06310 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IF561_06310 IPR029056 Ribokinase-like IF561_06310 IPR023685 Pyridoxal kinase PdxY IF561_06310 IPR004625 Pyridoxine kinase IF561_06325 IPR006143 RND efflux pump, membrane fusion protein IF561_06325 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA IF561_06325 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_06380 IPR003488 DNA recombination-mediator protein A IF561_06380 IPR041104 DNA processing protein A, sterile alpha motif domain IF561_06510 IPR035412 Phage terminase large subunit, N-terminal IF561_06510 IPR006437 Bacteriophage terminase, large subunit IF561_06510 IPR035413 Phage terminase large subunit, C-terminal IF561_06520 IPR003115 ParB/Sulfiredoxin IF561_06520 IPR036086 ParB/Sulfiredoxin superfamily IF561_06535 IPR036913 YegP-like superfamily IF561_06535 IPR010879 Domain of unknown function DUF1508 IF561_06565 IPR013668 Ribonuclease R winged-helix domain IF561_06565 IPR022967 RNA-binding domain, S1 IF561_06565 IPR003029 S1 domain IF561_06565 IPR022966 Ribonuclease II/R, conserved site IF561_06565 IPR001900 Ribonuclease II/R IF561_06565 IPR013223 Ribonuclease B, N-terminal OB domain IF561_06565 IPR012340 Nucleic acid-binding, OB-fold IF561_06565 IPR040476 RNase II/RNase R, cold shock domain IF561_06565 IPR011805 Ribonuclease R IF561_06565 IPR011129 Cold shock domain IF561_06565 IPR004476 Ribonuclease II/ribonuclease R IF561_06570 IPR012156 Cold shock, CspA IF561_06570 IPR011129 Cold shock domain IF561_06570 IPR019844 Cold-shock (CSD) domain IF561_06570 IPR002059 Cold-shock protein, DNA-binding IF561_06570 IPR012340 Nucleic acid-binding, OB-fold IF561_06675 IPR005955 Glutathione S-transferases, class Zeta IF561_06675 IPR004046 Glutathione S-transferase, C-terminal IF561_06675 IPR010987 Glutathione S-transferase, C-terminal-like IF561_06675 IPR004045 Glutathione S-transferase, N-terminal IF561_06675 IPR040079 Glutathione Transferase family IF561_06675 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_06675 IPR034333 Glutathione S-transferases, class Zeta , N-terminal IF561_06675 IPR036249 Thioredoxin-like superfamily IF561_06675 IPR034330 Glutathione S-transferases, class Zeta , C-terminal IF561_06685 IPR005708 Homogentisate 1,2-dioxygenase IF561_06685 IPR011051 RmlC-like cupin domain superfamily IF561_06685 IPR014710 RmlC-like jelly roll fold IF561_06690 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal IF561_06690 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_06690 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_06690 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_06690 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal IF561_06690 IPR005956 4-hydroxyphenylpyruvate dioxygenase IF561_06700 IPR036264 Bacterial exopeptidase dimerisation domain IF561_06700 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IF561_06700 IPR008007 Peptidase M42 IF561_06700 IPR011650 Peptidase M20, dimerisation domain IF561_06700 IPR002933 Peptidase M20 IF561_06700 IPR010162 Peptidase M20B, peptidase T-like IF561_06705 IPR039424 Solute-binding protein family 5 IF561_06705 IPR000914 Solute-binding protein family 5 domain IF561_06705 IPR023765 Solute-binding protein family 5, conserved site IF561_06705 IPR030678 Peptide/nickel binding protein, MppA-type IF561_06710 IPR035906 MetI-like superfamily IF561_06710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_06715 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_06715 IPR035906 MetI-like superfamily IF561_06715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_06720 IPR017871 ABC transporter, conserved site IF561_06720 IPR003439 ABC transporter-like IF561_06720 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_06720 IPR003593 AAA+ ATPase domain IF561_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06725 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06725 IPR017871 ABC transporter, conserved site IF561_06725 IPR003439 ABC transporter-like IF561_06725 IPR003593 AAA+ ATPase domain IF561_06725 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_06735 IPR022409 PKD/Chitinase domain IF561_06735 IPR000601 PKD domain IF561_06735 IPR013783 Immunoglobulin-like fold IF561_06735 IPR035986 PKD domain superfamily IF561_06735 IPR013661 Peptidase M9, collagenase, N-terminal domain IF561_06735 IPR002169 Peptidase M9A/M9B, collagenase, bacterial IF561_06745 IPR035906 MetI-like superfamily IF561_06745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_06750 IPR035906 MetI-like superfamily IF561_06750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_06755 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA IF561_06755 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit IF561_06755 IPR003439 ABC transporter-like IF561_06755 IPR013611 Transport-associated OB, type 2 IF561_06755 IPR017871 ABC transporter, conserved site IF561_06755 IPR003593 AAA+ ATPase domain IF561_06755 IPR008995 Molybdate/tungstate binding, C-terminal IF561_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06760 IPR013785 Aldolase-type TIM barrel IF561_06760 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IF561_06760 IPR002220 DapA-like IF561_06760 IPR020625 Schiff base-forming aldolase, active site IF561_06760 IPR020624 Schiff base-forming aldolase, conserved site IF561_06765 IPR036291 NAD(P)-binding domain superfamily IF561_06765 IPR003462 Ornithine cyclodeaminase/mu-crystallin IF561_06765 IPR023401 Ornithine cyclodeaminase, N-terminal IF561_06780 IPR008794 Proline racemase family IF561_06785 IPR015590 Aldehyde dehydrogenase domain IF561_06785 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_06785 IPR016161 Aldehyde/histidinol dehydrogenase IF561_06785 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_06790 IPR036390 Winged helix DNA-binding domain superfamily IF561_06790 IPR008920 Transcription regulator FadR/GntR, C-terminal IF561_06790 IPR000524 Transcription regulator HTH, GntR IF561_06790 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_06810 IPR010286 METTL16/RlmF family IF561_06810 IPR016909 Ribosomal RNA large subunit methyltransferase F IF561_06810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_06815 IPR002725 Protein of unknown function DUF45 IF561_06820 IPR007074 LicD family IF561_06825 IPR016040 NAD(P)-binding domain IF561_06825 IPR036291 NAD(P)-binding domain superfamily IF561_06830 IPR034683 Cytidylyltransferase IspD/TarI IF561_06830 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site IF561_06830 IPR029044 Nucleotide-diphospho-sugar transferases IF561_06830 IPR034709 Ribitol-5-phosphate cytidylyltransferase IF561_06850 IPR000847 Transcription regulator HTH, LysR IF561_06850 IPR005119 LysR, substrate-binding IF561_06850 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_06850 IPR036390 Winged helix DNA-binding domain superfamily IF561_06870 IPR023693 ABC transporter, vitamin B12, BtuD IF561_06870 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06870 IPR003439 ABC transporter-like IF561_06870 IPR003593 AAA+ ATPase domain IF561_06875 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC IF561_06875 IPR037294 ABC transporter, BtuC-like IF561_06875 IPR000522 ABC transporter, permease protein, BtuC-like IF561_06880 IPR016681 Succinylglutamate desuccinylase IF561_06880 IPR007036 Succinylglutamate desuccinylase/aspartoacylase IF561_06895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_06895 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase IF561_06900 IPR003805 Adenosylcobinamide-GDP ribazoletransferase IF561_06905 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal IF561_06905 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like IF561_06905 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily IF561_06905 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic IF561_06910 IPR016040 NAD(P)-binding domain IF561_06910 IPR036291 NAD(P)-binding domain superfamily IF561_06910 IPR000534 Semialdehyde dehydrogenase, NAD-binding IF561_06915 IPR001991 Sodium:dicarboxylate symporter IF561_06915 IPR036458 Sodium:dicarboxylate symporter superfamily IF561_06925 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_06925 IPR036397 Ribonuclease H superfamily IF561_06925 IPR013620 Exodeoxyribonuclease I, C-terminal IF561_06925 IPR038649 Exonuclease I, SH3-like domain superfamily IF561_06925 IPR034748 Exonuclease I, C-terminal alpha-helical domain IF561_06925 IPR012337 Ribonuclease H-like superfamily IF561_06925 IPR034747 Exonuclease I, SH3-like domain IF561_06925 IPR023607 Exodeoxyribonuclease I IF561_06930 IPR022957 Uncharacterised protein family UPF0299 IF561_06930 IPR005538 LrgA/CidA family IF561_06935 IPR005261 Conserved hypothetical protein CHP00659 IF561_06935 IPR007300 CidB/LrgB family IF561_06940 IPR016192 APOBEC/CMP deaminase, zinc-binding IF561_06940 IPR002125 Cytidine and deoxycytidylate deaminase domain IF561_06940 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain IF561_06940 IPR006263 Cytidine deaminase, homodimeric IF561_06940 IPR016193 Cytidine deaminase-like IF561_06940 IPR020797 Cytidine deaminase, bacteria IF561_06945 IPR016185 Pre-ATP-grasp domain superfamily IF561_06945 IPR011761 ATP-grasp fold IF561_06945 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IF561_06945 IPR011054 Rudiment single hybrid motif IF561_06945 IPR013815 ATP-grasp fold, subdomain 1 IF561_06945 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase IF561_06950 IPR008854 TPMT family IF561_06950 IPR025835 Thiopurine S-methyltransferase IF561_06950 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification IF561_06950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_06960 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_06960 IPR000119 Histone-like DNA-binding protein IF561_06960 IPR020816 Histone-like DNA-binding protein, conserved site IF561_06960 IPR005684 Integration host factor, alpha subunit IF561_06970 IPR005146 B3/B4 tRNA-binding domain IF561_06970 IPR009061 Putative DNA-binding domain superfamily IF561_06970 IPR002547 tRNA-binding domain IF561_06970 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily IF561_06970 IPR012340 Nucleic acid-binding, OB-fold IF561_06970 IPR005121 Ferrodoxin-fold anticodon-binding domain IF561_06970 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit IF561_06970 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain IF561_06970 IPR005147 tRNA synthetase, B5-domain IF561_06970 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain IF561_06970 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 IF561_06975 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_06975 IPR002319 Phenylalanyl-tRNA synthetase IF561_06975 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial IF561_06975 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal IF561_06975 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit IF561_06975 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IF561_06980 IPR000160 GGDEF domain IF561_06980 IPR033424 Membrane-associated sensor domain IF561_06980 IPR029787 Nucleotide cyclase IF561_07010 IPR002765 Uncharacterised protein family UPF0145 IF561_07010 IPR035439 UPF0145 domain superfamily IF561_07015 IPR035566 Ribosomal protein L20, C-terminal IF561_07015 IPR005813 Ribosomal protein L20 IF561_07020 IPR018265 Ribosomal protein L35, conserved site IF561_07020 IPR021137 Ribosomal protein L35 IF561_07020 IPR001706 Ribosomal protein L35, non-mitochondrial IF561_07020 IPR037229 Ribosomal protein L35 superfamily IF561_07025 IPR019814 Translation initiation factor 3, N-terminal IF561_07025 IPR001288 Translation initiation factor 3 IF561_07025 IPR019813 Translation initiation factor 3, conserved site IF561_07025 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily IF561_07025 IPR019815 Translation initiation factor 3, C-terminal IF561_07025 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily IF561_07030 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IF561_07030 IPR033728 Threonine-tRNA ligase catalytic core domain IF561_07030 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IF561_07030 IPR036621 Anticodon-binding domain superfamily IF561_07030 IPR012676 TGS-like IF561_07030 IPR004095 TGS IF561_07030 IPR012675 Beta-grasp domain superfamily IF561_07030 IPR004154 Anticodon-binding IF561_07030 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IF561_07030 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_07030 IPR002320 Threonine-tRNA ligase, class IIa IF561_07045 IPR036390 Winged helix DNA-binding domain superfamily IF561_07045 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IF561_07045 IPR011663 UbiC transcription regulator-associated IF561_07045 IPR000524 Transcription regulator HTH, GntR IF561_07045 IPR010248 Histidine utilization repressor IF561_07045 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07050 IPR006680 Amidohydrolase-related IF561_07050 IPR011059 Metal-dependent hydrolase, composite domain superfamily IF561_07050 IPR032466 Metal-dependent hydrolase IF561_07050 IPR005920 Imidazolonepropionase IF561_07055 IPR005923 Formiminoglutamase IF561_07055 IPR006035 Ureohydrolase IF561_07055 IPR023696 Ureohydrolase domain superfamily IF561_07055 IPR020855 Ureohydrolase, manganese-binding site IF561_07060 IPR038364 Urocanase, central domain superfamily IF561_07060 IPR023636 Urocanase conserved site IF561_07060 IPR035401 Urocanase, C-terminal domain IF561_07060 IPR023637 Urocanase IF561_07060 IPR035400 Urocanase, N-terminal domain IF561_07060 IPR035085 Urocanase, Rossmann-like domain IF561_07060 IPR036190 Urocanase superfamily IF561_07065 IPR024083 Fumarase/histidase, N-terminal IF561_07065 IPR022313 Phenylalanine/histidine ammonia-lyases, active site IF561_07065 IPR008948 L-Aspartase-like IF561_07065 IPR001106 Aromatic amino acid lyase IF561_07065 IPR005921 Histidine ammonia-lyase IF561_07075 IPR007318 Phospholipid methyltransferase IF561_07080 IPR016166 FAD-binding domain, PCMH-type IF561_07080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_07080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_07080 IPR016164 FAD-linked oxidase-like, C-terminal IF561_07080 IPR036318 FAD-binding, type PCMH-like superfamily IF561_07080 IPR009051 Alpha-helical ferredoxin IF561_07080 IPR004113 FAD-linked oxidase, C-terminal IF561_07080 IPR006094 FAD linked oxidase, N-terminal IF561_07095 IPR008722 Outer membrane porin F, N-terminal IF561_07095 IPR036737 OmpA-like domain superfamily IF561_07095 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_07095 IPR006664 Outer membrane protein, bacterial IF561_07095 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_07095 IPR028974 TSP type-3 repeat IF561_07095 IPR006665 OmpA-like domain IF561_07115 IPR028923 SAICAR synthetase/ADE2, N-terminal IF561_07115 IPR018236 SAICAR synthetase, conserved site IF561_07115 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type IF561_07120 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_07120 IPR008963 Purple acid phosphatase-like, N-terminal IF561_07120 IPR032093 Phospholipase D, N-terminal IF561_07120 IPR038607 PhoD-like superfamily IF561_07120 IPR018946 Alkaline phosphatase D-related IF561_07130 IPR003187 Phospholipase A1 IF561_07130 IPR036541 Phospholipase A1 superfamily IF561_07135 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal IF561_07135 IPR007502 Helicase-associated domain IF561_07135 IPR001650 Helicase, C-terminal IF561_07135 IPR011545 DEAD/DEAH box helicase domain IF561_07135 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07135 IPR010225 ATP-dependent helicase HrpB IF561_07140 IPR015884 Malic enzyme, conserved site IF561_07140 IPR012301 Malic enzyme, N-terminal domain IF561_07140 IPR012302 Malic enzyme, NAD-binding IF561_07140 IPR001891 Malic oxidoreductase IF561_07140 IPR036291 NAD(P)-binding domain superfamily IF561_07140 IPR023667 NAD-dependent malic enzyme, proteobacteria IF561_07140 IPR037062 Malic enzyme, N-terminal domain superfamily IF561_07145 IPR003848 Domain of unknown function DUF218 IF561_07145 IPR023604 Uncharacterised protein family SanA IF561_07150 IPR031312 Sodium/sulphate symporter, conserved site IF561_07150 IPR001898 Solute carrier family 13 IF561_07155 IPR029787 Nucleotide cyclase IF561_07155 IPR001789 Signal transduction response regulator, receiver domain IF561_07155 IPR011006 CheY-like superfamily IF561_07155 IPR000160 GGDEF domain IF561_07165 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07165 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07165 IPR010970 Cysteine desulfurase, SufS IF561_07165 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_07165 IPR000192 Aminotransferase class V domain IF561_07165 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07175 IPR023753 FAD/NAD(P)-binding domain IF561_07175 IPR005982 Thioredoxin reductase IF561_07175 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IF561_07175 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_07180 IPR017871 ABC transporter, conserved site IF561_07180 IPR011527 ABC transporter type 1, transmembrane domain IF561_07180 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_07180 IPR003593 AAA+ ATPase domain IF561_07180 IPR003439 ABC transporter-like IF561_07180 IPR039421 Type I protein exporter IF561_07180 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD IF561_07180 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07185 IPR003593 AAA+ ATPase domain IF561_07185 IPR003439 ABC transporter-like IF561_07185 IPR011527 ABC transporter type 1, transmembrane domain IF561_07185 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_07185 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC IF561_07185 IPR017871 ABC transporter, conserved site IF561_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07190 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IF561_07190 IPR011780 D-serine ammonia-lyase IF561_07190 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_07190 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_07195 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_07195 IPR022278 Phosphoserine aminotransferase IF561_07195 IPR000192 Aminotransferase class V domain IF561_07195 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07205 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_07205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_07205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_07205 IPR005467 Histidine kinase domain IF561_07205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_07205 IPR003594 Histidine kinase/HSP90-like ATPase IF561_07205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_07220 IPR026256 Transcriptional regulator, TfoX/Sxy-type IF561_07220 IPR007076 TfoX, N-terminal IF561_07220 IPR007077 TfoX, C-terminal IF561_07230 IPR005642 Lysine exporter LysO IF561_07240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07240 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07240 IPR002129 Pyridoxal phosphate-dependent decarboxylase IF561_07240 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent IF561_07245 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07245 IPR001347 Sugar isomerase (SIS) IF561_07245 IPR035472 RpiR-like, SIS domain IF561_07245 IPR000281 Helix-turn-helix protein RpiR IF561_07245 IPR009057 Homeobox-like domain superfamily IF561_07250 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IF561_07250 IPR018211 Alcohol dehydrogenase, iron-type, conserved site IF561_07250 IPR039697 Iron-type alcohol dehydrogenase-like IF561_07255 IPR002109 Glutaredoxin IF561_07255 IPR014025 Glutaredoxin subgroup IF561_07255 IPR011902 Glutaredoxin, GrxA IF561_07255 IPR036249 Thioredoxin-like superfamily IF561_07260 IPR023017 Transport protein YbjL, putative IF561_07260 IPR006512 YidE/YbjL duplication IF561_07260 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_07260 IPR006037 Regulator of K+ conductance, C-terminal IF561_07265 IPR010758 Trans-2-enoyl-CoA reductase IF561_07265 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative IF561_07265 IPR024906 Enoyl reductase FAD binding domain IF561_07270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_07270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_07270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_07270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_07270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_07270 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type IF561_07270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_07275 IPR032551 HTH-type transcriptional repressor, C-terminal IF561_07275 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_07275 IPR009057 Homeobox-like domain superfamily IF561_07275 IPR001647 DNA-binding HTH domain, TetR-type IF561_07275 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_07280 IPR023171 Na/H antiporter domain superfamily IF561_07280 IPR004670 Na+/H+ antiporter NhaA IF561_07295 IPR003593 AAA+ ATPase domain IF561_07295 IPR003439 ABC transporter-like IF561_07295 IPR017871 ABC transporter, conserved site IF561_07295 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07300 IPR002528 Multi antimicrobial extrusion protein IF561_07305 IPR036291 NAD(P)-binding domain superfamily IF561_07305 IPR021295 Protein of unknown function DUF2867 IF561_07305 IPR016040 NAD(P)-binding domain IF561_07310 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK IF561_07310 IPR011031 Multihaem cytochrome IF561_07310 IPR036280 Multiheme cytochrome superfamily IF561_07310 IPR005126 NapC/NirT cytochrome c, N-terminal IF561_07310 IPR038266 NapC/NirT cytochrome c superfamily IF561_07325 IPR020015 Decaheme cytochrome, c-type, DmsE IF561_07325 IPR036280 Multiheme cytochrome superfamily IF561_07325 IPR011031 Multihaem cytochrome IF561_07325 IPR010177 Doubled CXXCH motif IF561_07340 IPR020846 Major facilitator superfamily domain IF561_07340 IPR004734 Multidrug resistance protein IF561_07340 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IF561_07340 IPR011701 Major facilitator superfamily IF561_07340 IPR036259 MFS transporter superfamily IF561_07345 IPR036986 RNA-binding S4 domain superfamily IF561_07345 IPR002942 RNA-binding S4 domain IF561_07345 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IF561_07345 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_07345 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_07345 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IF561_07345 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IF561_07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07350 IPR011332 Zinc-binding ribosomal protein IF561_07350 IPR001650 Helicase, C-terminal IF561_07350 IPR006935 Helicase/UvrB, N-terminal IF561_07350 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_07360 IPR011006 CheY-like superfamily IF561_07360 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_07360 IPR001789 Signal transduction response regulator, receiver domain IF561_07360 IPR039420 Transcriptional regulatory protein WalR-like IF561_07360 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07360 IPR016032 Signal transduction response regulator, C-terminal effector IF561_07365 IPR003660 HAMP domain IF561_07365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_07365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_07365 IPR005467 Histidine kinase domain IF561_07365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_07365 IPR003594 Histidine kinase/HSP90-like ATPase IF561_07370 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal IF561_07370 IPR029751 Ribosomal protein L25 IF561_07370 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily IF561_07370 IPR020055 Ribosomal protein L25, short-form IF561_07385 IPR036907 5'-Nucleotidase, C-terminal domain superfamily IF561_07385 IPR006146 5'-Nucleotidase, conserved site IF561_07385 IPR006179 5'-Nucleotidase/apyrase IF561_07385 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_07385 IPR029052 Metallo-dependent phosphatase-like IF561_07385 IPR008334 5'-Nucleotidase, C-terminal IF561_07395 IPR010710 Protein of unknown function DUF1289 IF561_07405 IPR011006 CheY-like superfamily IF561_07405 IPR001789 Signal transduction response regulator, receiver domain IF561_07405 IPR000792 Transcription regulator LuxR, C-terminal IF561_07405 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_07410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_07410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_07410 IPR005467 Histidine kinase domain IF561_07410 IPR003594 Histidine kinase/HSP90-like ATPase IF561_07410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_07420 IPR028261 Dihydroprymidine dehydrogenase domain II IF561_07420 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_07420 IPR023753 FAD/NAD(P)-binding domain IF561_07420 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 IF561_07420 IPR009051 Alpha-helical ferredoxin IF561_07430 IPR032816 SNARE associated Golgi protein IF561_07435 IPR006059 Bacterial extracellular solute-binding protein IF561_07435 IPR027020 Protein ynjB IF561_07440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_07440 IPR035906 MetI-like superfamily IF561_07445 IPR003593 AAA+ ATPase domain IF561_07445 IPR003439 ABC transporter-like IF561_07445 IPR017871 ABC transporter, conserved site IF561_07445 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07450 IPR000462 CDP-alcohol phosphatidyltransferase IF561_07460 IPR009057 Homeobox-like domain superfamily IF561_07460 IPR025944 Sigma-54 interaction domain, conserved site IF561_07460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_07460 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_07460 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_07460 IPR003593 AAA+ ATPase domain IF561_07460 IPR029016 GAF-like domain superfamily IF561_07460 IPR003018 GAF domain IF561_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07465 IPR016100 Prismane, alpha-bundle IF561_07465 IPR011254 Prismane-like superfamily IF561_07465 IPR016099 Prismane-like, alpha/beta-sandwich IF561_07465 IPR010048 Hydroxylamine reductase IF561_07465 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase IF561_07470 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_07470 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_07470 IPR017938 Riboflavin synthase-like beta-barrel IF561_07470 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_07470 IPR000951 Phthalate dioxygenase reductase IF561_07470 IPR012675 Beta-grasp domain superfamily IF561_07470 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_07470 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_07470 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain IF561_07480 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_07480 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_07480 IPR006508 Pseudouridine synthase, RluA-like IF561_07480 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_07485 IPR000727 Target SNARE coiled-coil homology domain IF561_07485 IPR003660 HAMP domain IF561_07485 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_07485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_07485 IPR004090 Chemotaxis methyl-accepting receptor IF561_07490 IPR000175 Sodium:neurotransmitter symporter IF561_07490 IPR037272 Sodium:neurotransmitter symporter superfamily IF561_07495 IPR022924 Cardiolipin synthase IF561_07495 IPR001736 Phospholipase D/Transphosphatidylase IF561_07495 IPR025202 Phospholipase D-like domain IF561_07495 IPR027379 Cardiolipin synthase N-terminal IF561_07495 IPR030840 Cardiolipin synthase A IF561_07500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07500 IPR006233 Cystathionine beta-lyase, bacterial IF561_07500 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07500 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IF561_07505 IPR029058 Alpha/Beta hydrolase fold IF561_07505 IPR000073 Alpha/beta hydrolase fold-1 IF561_07510 IPR004961 Lipase chaperone IF561_07515 IPR011257 DNA glycosylase IF561_07515 IPR017926 Glutamine amidotransferase IF561_07515 IPR001674 GMP synthase, C-terminal IF561_07515 IPR025777 GMP synthetase ATP pyrophosphatase domain IF561_07515 IPR000182 GNAT domain IF561_07515 IPR016181 Acyl-CoA N-acyltransferase IF561_07515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_07515 IPR029062 Class I glutamine amidotransferase-like IF561_07515 IPR005019 Methyladenine glycosylase IF561_07520 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_07520 IPR001036 Acriflavin resistance protein IF561_07530 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_07530 IPR006143 RND efflux pump, membrane fusion protein IF561_07535 IPR014320 Phage shock protein, PspC IF561_07535 IPR007168 Phage shock protein, PspC, N-terminal IF561_07540 IPR009554 Phage shock protein B IF561_07545 IPR007157 PspA/IM30 IF561_07545 IPR014319 Phage shock protein, PspA IF561_07550 IPR003593 AAA+ ATPase domain IF561_07550 IPR002197 DNA binding HTH domain, Fis-type IF561_07550 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07550 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_07550 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_07550 IPR025944 Sigma-54 interaction domain, conserved site IF561_07550 IPR009057 Homeobox-like domain superfamily IF561_07550 IPR014317 Transcription activator PspF IF561_07555 IPR030678 Peptide/nickel binding protein, MppA-type IF561_07555 IPR023765 Solute-binding protein family 5, conserved site IF561_07555 IPR039424 Solute-binding protein family 5 IF561_07555 IPR000914 Solute-binding protein family 5 domain IF561_07560 IPR035906 MetI-like superfamily IF561_07560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_07565 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_07565 IPR035906 MetI-like superfamily IF561_07565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_07570 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_07570 IPR003439 ABC transporter-like IF561_07570 IPR003593 AAA+ ATPase domain IF561_07575 IPR003439 ABC transporter-like IF561_07575 IPR003593 AAA+ ATPase domain IF561_07575 IPR017871 ABC transporter, conserved site IF561_07575 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07585 IPR004097 DHHA2 domain IF561_07585 IPR001667 DDH domain IF561_07585 IPR038763 DHH phosphoesterase superfamily IF561_07585 IPR038222 DHHA2 domain superfamily IF561_07585 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable IF561_07595 IPR002252 Glycoside hydrolase family 36 IF561_07595 IPR031705 Glycosyl hydrolase family 36, C-terminal IF561_07595 IPR038417 Alpha-galactosidase, N-terminal domain superfamily IF561_07595 IPR017853 Glycoside hydrolase superfamily IF561_07595 IPR013785 Aldolase-type TIM barrel IF561_07595 IPR000111 Glycoside hydrolase family 27/36, conserved site IF561_07595 IPR031704 Glycosyl hydrolase family 36, N-terminal IF561_07600 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_07600 IPR011887 Trimethylamine-N-oxide reductase TorA IF561_07600 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IF561_07600 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IF561_07600 IPR006657 Molybdopterin dinucleotide-binding domain IF561_07600 IPR041460 Molybdopterin oxidoreductase, N-terminal IF561_07600 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_07600 IPR006656 Molybdopterin oxidoreductase IF561_07600 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain IF561_07605 IPR038266 NapC/NirT cytochrome c superfamily IF561_07605 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT IF561_07605 IPR024717 Denitrification system component NapC/NirT/NrfH IF561_07605 IPR005126 NapC/NirT cytochrome c, N-terminal IF561_07605 IPR011031 Multihaem cytochrome IF561_07605 IPR036280 Multiheme cytochrome superfamily IF561_07610 IPR004448 Nitrate reductas, NapE, periplasmic IF561_07610 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE IF561_07615 IPR005226 UPF0014 family IF561_07625 IPR023271 Aquaporin-like IF561_07625 IPR000292 Formate/nitrite transporter IF561_07625 IPR024002 Formate/nitrite transporter, conserved site IF561_07625 IPR023999 Formate transporter FocA, putative IF561_07650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_07650 IPR003848 Domain of unknown function DUF218 IF561_07655 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07655 IPR001267 Thymidine kinase IF561_07655 IPR020633 Thymidine kinase, conserved site IF561_07660 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_07660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_07660 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase IF561_07660 IPR015803 Cysteine-tRNA ligase IF561_07660 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR IF561_07660 IPR032678 tRNA synthetases class I, catalytic domain IF561_07665 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase IF561_07665 IPR029000 Cyclophilin-like domain superfamily IF561_07665 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain IF561_07665 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site IF561_07670 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_07670 IPR029052 Metallo-dependent phosphatase-like IF561_07670 IPR010138 UDP-2,3-diacylglucosamine hydrolase IF561_07675 IPR013976 Metal-dependent hydrolase HDOD IF561_07675 IPR001633 EAL domain IF561_07675 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing IF561_07675 IPR035919 EAL domain superfamily IF561_07680 IPR032710 NTF2-like domain superfamily IF561_07680 IPR023006 Uncharacterised protein family UPF0225 IF561_07680 IPR004027 SEC-C motif IF561_07685 IPR023019 Histidine biosynthesis bifunctional protein HisIE IF561_07685 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase IF561_07685 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like IF561_07685 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain IF561_07685 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily IF561_07690 IPR011060 Ribulose-phosphate binding barrel IF561_07690 IPR013785 Aldolase-type TIM barrel IF561_07690 IPR004651 Histidine biosynthesis, HisF IF561_07690 IPR006062 Histidine biosynthesis IF561_07735 IPR006062 Histidine biosynthesis IF561_07735 IPR013785 Aldolase-type TIM barrel IF561_07735 IPR011060 Ribulose-phosphate binding barrel IF561_07735 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA IF561_07735 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase IF561_07740 IPR017926 Glutamine amidotransferase IF561_07740 IPR010139 Imidazole glycerol phosphate synthase, subunit H IF561_07740 IPR029062 Class I glutamine amidotransferase-like IF561_07745 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_07745 IPR013954 Polynucleotide kinase 3 phosphatase IF561_07745 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site IF561_07745 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily IF561_07745 IPR006543 Histidinol-phosphate phosphatase IF561_07745 IPR005954 Histidinol-phosphatase IF561_07745 IPR020566 Histidine biosynthesis bifunctional protein HisB IF561_07745 IPR023214 HAD superfamily IF561_07745 IPR006549 HAD-superfamily hydrolase,subfamily IIIA IF561_07745 IPR036412 HAD-like superfamily IF561_07745 IPR000807 Imidazoleglycerol-phosphate dehydratase IF561_07750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07750 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IF561_07750 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07750 IPR005861 Histidinol-phosphate aminotransferase family IF561_07750 IPR004839 Aminotransferase, class I/classII IF561_07750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07755 IPR016161 Aldehyde/histidinol dehydrogenase IF561_07755 IPR001692 Histidinol dehydrogenase, conserved site IF561_07755 IPR022695 Histidinol dehydrogenase, monofunctional IF561_07755 IPR012131 Histidinol dehydrogenase IF561_07760 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IF561_07760 IPR011322 Nitrogen regulatory PII-like, alpha/beta IF561_07760 IPR013115 Histidine biosynthesis HisG, C-terminal IF561_07760 IPR013820 ATP phosphoribosyltransferase, catalytic domain IF561_07760 IPR018198 ATP phosphoribosyltransferase, conserved site IF561_07760 IPR001348 ATP phosphoribosyltransferase HisG IF561_07760 IPR020621 ATP phosphoribosyltransferase HisG, long form IF561_07765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_07765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_07765 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_07765 IPR001789 Signal transduction response regulator, receiver domain IF561_07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07765 IPR025944 Sigma-54 interaction domain, conserved site IF561_07765 IPR003593 AAA+ ATPase domain IF561_07765 IPR011006 CheY-like superfamily IF561_07765 IPR002197 DNA binding HTH domain, Fis-type IF561_07765 IPR009057 Homeobox-like domain superfamily IF561_07775 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IF561_07780 IPR027444 Histone-like protein H-NS, C-terminal domain IF561_07780 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily IF561_07780 IPR001801 Histone-like protein H-NS IF561_07780 IPR027454 Histone-like protein H-NS, N-terminal IF561_07785 IPR029056 Ribokinase-like IF561_07785 IPR011611 Carbohydrate kinase PfkB IF561_07785 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_07795 IPR004506 tRNA-specific 2-thiouridylase IF561_07795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_07795 IPR023382 Adenine nucleotide alpha hydrolase-like domains IF561_07800 IPR035932 HflD-like superfamily IF561_07800 IPR007451 High frequency lysogenization protein HflD IF561_07805 IPR013539 Adenylosuccinate lyase PurB, C-terminal IF561_07805 IPR022761 Fumarate lyase, N-terminal IF561_07805 IPR024083 Fumarase/histidase, N-terminal IF561_07805 IPR020557 Fumarate lyase, conserved site IF561_07805 IPR000362 Fumarate lyase family IF561_07805 IPR008948 L-Aspartase-like IF561_07805 IPR004769 Adenylosuccinate lyase IF561_07825 IPR003333 Mycolic acid cyclopropane synthase IF561_07825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_07840 IPR036291 NAD(P)-binding domain superfamily IF561_07840 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_07840 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_07850 IPR022919 Peptidase M48, protease HtpX, putative IF561_07850 IPR001915 Peptidase M48 IF561_07860 IPR004472 Dethiobiotin synthase BioD IF561_07860 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07865 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IF561_07865 IPR013216 Methyltransferase type 11 IF561_07865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_07870 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IF561_07870 IPR004839 Aminotransferase, class I/classII IF561_07870 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type IF561_07870 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria IF561_07870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07870 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07875 IPR013785 Aldolase-type TIM barrel IF561_07875 IPR006638 Elp3/MiaB/NifB IF561_07875 IPR024177 Biotin synthase IF561_07875 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB IF561_07875 IPR010722 Biotin and thiamin synthesis-associated domain IF561_07875 IPR007197 Radical SAM IF561_07880 IPR005814 Aminotransferase class-III IF561_07880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_07880 IPR015424 Pyridoxal phosphate-dependent transferase IF561_07880 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA IF561_07880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_07885 IPR000962 Zinc finger, DksA/TraR C4-type IF561_07885 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria IF561_07885 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IF561_07900 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IF561_07900 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_07900 IPR015866 Serine-tRNA synthetase, type1, N-terminal IF561_07900 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily IF561_07900 IPR033729 Serine-tRNA ligase catalytic core domain IF561_07900 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IF561_07900 IPR002317 Serine-tRNA ligase, type1 IF561_07905 IPR003593 AAA+ ATPase domain IF561_07905 IPR032423 AAA C-terminal domain IF561_07905 IPR003959 ATPase, AAA-type, core IF561_07905 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IF561_07905 IPR021886 MgsA AAA+ ATPase C-terminal IF561_07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07910 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria IF561_07910 IPR029046 Lipoprotein localisation LolA/LolB/LppX IF561_07910 IPR004564 Outer membrane lipoprotein carrier protein LolA-like IF561_07915 IPR025199 DNA translocase FtsK, 4TM region IF561_07915 IPR002543 FtsK domain IF561_07915 IPR036390 Winged helix DNA-binding domain superfamily IF561_07915 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07915 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_07915 IPR018541 FtsK gamma domain IF561_07915 IPR041027 FtsK alpha domain IF561_07920 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_07920 IPR019888 Transcription regulator AsnC-type IF561_07920 IPR011008 Dimeric alpha-beta barrel IF561_07920 IPR000485 AsnC-type HTH domain IF561_07920 IPR011991 ArsR-like helix-turn-helix domain IF561_07920 IPR036390 Winged helix DNA-binding domain superfamily IF561_07920 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_07920 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07925 IPR036291 NAD(P)-binding domain superfamily IF561_07925 IPR008141 Alanine dehydrogenase IF561_07925 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IF561_07925 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IF561_07925 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IF561_07935 IPR036390 Winged helix DNA-binding domain superfamily IF561_07935 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_07935 IPR000847 Transcription regulator HTH, LysR IF561_07935 IPR005119 LysR, substrate-binding IF561_07945 IPR010386 tRNA-hydroxylase MiaE IF561_07945 IPR009078 Ferritin-like superfamily IF561_07945 IPR012347 Ferritin-like IF561_07950 IPR017766 Sphingomyelinase C/phospholipase C IF561_07950 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IF561_07950 IPR005135 Endonuclease/exonuclease/phosphatase IF561_07960 IPR024109 Tryptophan-tRNA ligase, bacterial-type IF561_07960 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_07960 IPR002305 Aminoacyl-tRNA synthetase, class Ic IF561_07960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_07960 IPR002306 Tryptophan-tRNA ligase IF561_07975 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IF561_07975 IPR001036 Acriflavin resistance protein IF561_07975 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_07980 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_07980 IPR006143 RND efflux pump, membrane fusion protein IF561_07985 IPR003660 HAMP domain IF561_07985 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_07985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_07985 IPR000727 Target SNARE coiled-coil homology domain IF561_07985 IPR004090 Chemotaxis methyl-accepting receptor IF561_08000 IPR009057 Homeobox-like domain superfamily IF561_08000 IPR006120 Resolvase, HTH domain IF561_08000 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IF561_08000 IPR006119 Resolvase, N-terminal catalytic domain IF561_08000 IPR006118 Recombinase, conserved site IF561_08005 IPR022892 Ribonuclease HI IF561_08005 IPR012337 Ribonuclease H-like superfamily IF561_08005 IPR036397 Ribonuclease H superfamily IF561_08005 IPR002156 Ribonuclease H domain IF561_08030 IPR010574 L-alanine exporter AlaE IF561_08035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_08035 IPR001789 Signal transduction response regulator, receiver domain IF561_08035 IPR011006 CheY-like superfamily IF561_08035 IPR015387 LuxQ, periplasmic IF561_08035 IPR003594 Histidine kinase/HSP90-like ATPase IF561_08035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_08035 IPR005467 Histidine kinase domain IF561_08035 IPR029151 Periplasmic sensor-like domain superfamily IF561_08035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_08035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_08045 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain IF561_08045 IPR016185 Pre-ATP-grasp domain superfamily IF561_08055 IPR007140 Protein of unknown function DUF350 IF561_08065 IPR003473 Quinolinate synthetase A IF561_08065 IPR036094 Quinolinate synthetase A superfamily IF561_08065 IPR023513 Quinolinate synthase A, type 1 IF561_08070 IPR032519 YbgF, trimerisation domain IF561_08070 IPR019734 Tetratricopeptide repeat IF561_08070 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_08070 IPR013026 Tetratricopeptide repeat-containing domain IF561_08070 IPR034706 Cell division coordinator CpoB IF561_08070 IPR014162 Cell division coordinator CpoB, C-terminal IF561_08075 IPR036737 OmpA-like domain superfamily IF561_08075 IPR039001 Peptidoglycan-associated lipoprotein IF561_08075 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal IF561_08075 IPR006665 OmpA-like domain IF561_08075 IPR006664 Outer membrane protein, bacterial IF561_08075 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_08080 IPR011659 WD40-like Beta Propeller IF561_08080 IPR036752 TolB, N-terminal domain superfamily IF561_08080 IPR007195 TolB, N-terminal IF561_08080 IPR014167 Tol-Pal system protein TolB IF561_08080 IPR011042 Six-bladed beta-propeller, TolB-like IF561_08090 IPR014168 Tol-Pal system protein TolR IF561_08090 IPR003400 Biopolymer transport protein ExbD/TolR IF561_08095 IPR014163 Tol-Pal system, TolQ IF561_08095 IPR002898 MotA/TolQ/ExbB proton channel IF561_08100 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site IF561_08100 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family IF561_08100 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase IF561_08100 IPR006683 Thioesterase domain IF561_08100 IPR029069 HotDog domain superfamily IF561_08110 IPR012994 Membrane bound YbgT-like IF561_08110 IPR011724 Cyd operon protein YbgT IF561_08115 IPR003317 Cytochrome ubiquinol oxidase subunit 2 IF561_08120 IPR002585 Cytochrome ubiquinol oxidase subunit 1 IF561_08125 IPR003593 AAA+ ATPase domain IF561_08125 IPR041445 RuvB, AAA lid domain IF561_08125 IPR004605 DNA helicase, Holliday junction RuvB-type IF561_08125 IPR008824 RuvB-like P-loop domain IF561_08125 IPR008823 RuvB C-terminal winged helix domain IF561_08125 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_08125 IPR036390 Winged helix DNA-binding domain superfamily IF561_08125 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08130 IPR036267 RuvA, C-terminal domain superfamily IF561_08130 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial IF561_08130 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IF561_08130 IPR011114 Holliday junction DNA helicase RuvA, C-terminal IF561_08130 IPR010994 RuvA domain 2-like IF561_08130 IPR000085 Bacterial DNA recombination protein RuvA IF561_08130 IPR012340 Nucleic acid-binding, OB-fold IF561_08135 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site IF561_08135 IPR004090 Chemotaxis methyl-accepting receptor IF561_08135 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding IF561_08135 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_08135 IPR003660 HAMP domain IF561_08135 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily IF561_08140 IPR012337 Ribonuclease H-like superfamily IF561_08140 IPR036397 Ribonuclease H superfamily IF561_08140 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site IF561_08140 IPR002176 Crossover junction endodeoxyribonuclease RuvC IF561_08145 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_08145 IPR012340 Nucleic acid-binding, OB-fold IF561_08145 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IF561_08145 IPR004115 GAD-like domain superfamily IF561_08145 IPR004524 Aspartate-tRNA ligase, type 1 IF561_08145 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_08145 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IF561_08145 IPR029351 GAD domain IF561_08150 IPR002763 Protein of unknown function DUF72 IF561_08150 IPR036520 UPF0759 superfamily IF561_08155 IPR005271 Carboxy-S-adenosyl-L-methionine synthase IF561_08155 IPR041698 Methyltransferase domain 25 IF561_08155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_08160 IPR010017 tRNA U34 carboxymethyltransferase IF561_08160 IPR027555 tRNA (mo5U34)-methyltransferase-like IF561_08160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_08165 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX IF561_08165 IPR041107 RimK, PreATP-grasp domain IF561_08165 IPR011761 ATP-grasp fold IF561_08165 IPR021109 Aspartic peptidase domain superfamily IF561_08165 IPR013651 ATP-grasp fold, RimK-type IF561_08165 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK IF561_08165 IPR013815 ATP-grasp fold, subdomain 1 IF561_08175 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX IF561_08175 IPR013815 ATP-grasp fold, subdomain 1 IF561_08175 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK IF561_08175 IPR041107 RimK, PreATP-grasp domain IF561_08175 IPR013651 ATP-grasp fold, RimK-type IF561_08175 IPR011761 ATP-grasp fold IF561_08185 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08185 IPR032520 MukB, hinge domain IF561_08185 IPR012090 Chromosome partition protein MukB IF561_08185 IPR007406 MukB, N-terminal domain IF561_08190 IPR042038 MukE, N-terminal domain IF561_08190 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE IF561_08190 IPR042037 MukE, C-terminal domain IF561_08195 IPR005582 Chromosome partition protein MukF IF561_08195 IPR033441 Chromosome partition protein MukF, C-terminal domain IF561_08195 IPR038198 MukF, C-terminal domain superfamily IF561_08195 IPR033440 Chromosome partition protein MukF, middle domain IF561_08195 IPR036141 MukF, middle domain superfamily IF561_08195 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_08195 IPR036390 Winged helix DNA-binding domain superfamily IF561_08195 IPR033439 Chromosome partition protein MukF, winged-helix domain IF561_08200 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase IF561_08200 IPR025714 Methyltransferase domain IF561_08200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_08205 IPR003848 Domain of unknown function DUF218 IF561_08210 IPR011006 CheY-like superfamily IF561_08210 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_08210 IPR001789 Signal transduction response regulator, receiver domain IF561_08210 IPR039420 Transcriptional regulatory protein WalR-like IF561_08210 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_08215 IPR036386 HscB, C-terminal domain superfamily IF561_08215 IPR036411 TorD-like superfamily IF561_08215 IPR023069 Chaperone TorD IF561_08215 IPR020945 DMSO/Nitrate reductase chaperone IF561_08220 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_08220 IPR000843 LacI-type HTH domain IF561_08220 IPR023588 Transcription regulator HTH, PurR IF561_08220 IPR028082 Periplasmic binding protein-like I IF561_08225 IPR007077 TfoX, C-terminal IF561_08225 IPR007076 TfoX, N-terminal IF561_08225 IPR026256 Transcriptional regulator, TfoX/Sxy-type IF561_08245 IPR013534 Starch synthase, catalytic domain IF561_08245 IPR011835 Bacterial/plant glycogen synthase IF561_08245 IPR001296 Glycosyl transferase, family 1 IF561_08250 IPR005835 Nucleotidyl transferase domain IF561_08250 IPR029044 Nucleotide-diphospho-sugar transferases IF561_08250 IPR011004 Trimeric LpxA-like superfamily IF561_08250 IPR005836 ADP-glucose pyrophosphorylase, conserved site IF561_08250 IPR011831 Glucose-1-phosphate adenylyltransferase IF561_08250 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial IF561_08255 IPR005733 DNA topoisomerase I, bacterial-type IF561_08255 IPR034149 DNA topoisomerase 1, TOPRIM domain IF561_08255 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type IF561_08255 IPR013498 DNA topoisomerase, type IA, zn finger IF561_08255 IPR006171 TOPRIM domain IF561_08255 IPR023405 DNA topoisomerase, type IA, core domain IF561_08255 IPR000380 DNA topoisomerase, type IA IF561_08255 IPR003601 DNA topoisomerase, type IA, domain 2 IF561_08255 IPR023406 DNA topoisomerase, type IA, active site IF561_08255 IPR013497 DNA topoisomerase, type IA, central IF561_08255 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IF561_08255 IPR028612 DNA topoisomerase I, type IA IF561_08255 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IF561_08255 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IF561_08255 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IF561_08260 IPR038191 YciN superfamily IF561_08260 IPR019633 Protein of unknown function DUF2498 IF561_08265 IPR001986 Enolpyruvate transferase domain IF561_08265 IPR036968 Enolpyruvate transferase domain superfamily IF561_08265 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase IF561_08265 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site IF561_08265 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IF561_08275 IPR016181 Acyl-CoA N-acyltransferase IF561_08275 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase IF561_08275 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal IF561_08280 IPR007471 N-end aminoacyl transferase, N-terminal IF561_08280 IPR007472 N-end rule aminoacyl transferase, C-terminal IF561_08280 IPR016181 Acyl-CoA N-acyltransferase IF561_08280 IPR017138 Aspartate/glutamate leucyltransferase IF561_08280 IPR030700 N-end rule aminoacyl transferase IF561_08285 IPR006196 RNA-binding domain, S1, IF1 type IF561_08285 IPR012340 Nucleic acid-binding, OB-fold IF561_08285 IPR022967 RNA-binding domain, S1 IF561_08285 IPR004368 Translation initiation factor IF-1 IF561_08295 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA IF561_08295 IPR019489 Clp ATPase, C-terminal IF561_08295 IPR018368 ClpA/B, conserved site 1 IF561_08295 IPR003959 ATPase, AAA-type, core IF561_08295 IPR003593 AAA+ ATPase domain IF561_08295 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08295 IPR028299 ClpA/B, conserved site 2 IF561_08295 IPR041546 ClpA/ClpB, AAA lid domain IF561_08295 IPR004176 Clp, N-terminal IF561_08295 IPR001270 ClpA/B family IF561_08295 IPR036628 Clp, N-terminal domain superfamily IF561_08300 IPR022935 ATP-dependent Clp protease adaptor protein ClpS IF561_08300 IPR003769 Adaptor protein ClpS, core IF561_08300 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IF561_08305 IPR012340 Nucleic acid-binding, OB-fold IF561_08305 IPR012156 Cold shock, CspA IF561_08305 IPR011129 Cold shock domain IF561_08305 IPR019844 Cold-shock (CSD) domain IF561_08305 IPR002059 Cold-shock protein, DNA-binding IF561_08305 IPR012751 CspD, cold shock IF561_08310 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric IF561_08315 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IF561_08315 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_08315 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_08315 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IF561_08315 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IF561_08320 IPR018635 Uncharacterised protein family UPF0319 IF561_08330 IPR001650 Helicase, C-terminal IF561_08330 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08330 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IF561_08330 IPR039000 ATP-dependent DNA helicase DinG IF561_08330 IPR010614 DEAD2 IF561_08330 IPR006555 ATP-dependent helicase, C-terminal IF561_08335 IPR002781 Transmembrane protein TauE-like IF561_08340 IPR038338 PriB/PriC superfamily IF561_08340 IPR010890 Primosomal replication PriB/PriC IF561_08345 IPR019630 Protein of unknown function DUF2496, YbaM-related IF561_08350 IPR037493 Exodeoxyribonuclease III-like IF561_08350 IPR005135 Endonuclease/exonuclease/phosphatase IF561_08350 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IF561_08350 IPR020848 AP endonuclease 1, conserved site IF561_08350 IPR020847 AP endonuclease 1, binding site IF561_08350 IPR004808 AP endonuclease 1 IF561_08360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_08360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_08360 IPR035906 MetI-like superfamily IF561_08365 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_08365 IPR030199 Histidine transport system permease protein HisQ IF561_08365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_08365 IPR035906 MetI-like superfamily IF561_08370 IPR018313 Solute-binding protein family 3, conserved site IF561_08370 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter IF561_08370 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_08375 IPR017871 ABC transporter, conserved site IF561_08375 IPR003439 ABC transporter-like IF561_08375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08375 IPR003593 AAA+ ATPase domain IF561_08375 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IF561_08390 IPR005949 Formate acetyltransferase IF561_08390 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_08390 IPR001150 Glycine radical domain IF561_08390 IPR004184 Pyruvate formate lyase domain IF561_08400 IPR013785 Aldolase-type TIM barrel IF561_08400 IPR034457 Organic radical-activating enzymes IF561_08400 IPR012838 Pyruvate formate-lyase 1 activating enzyme IF561_08400 IPR034465 Pyruvate formate-lyase activase IF561_08400 IPR001989 Radical-activating enzyme, conserved site IF561_08400 IPR007197 Radical SAM IF561_08400 IPR012839 Organic radical enzyme activase IF561_08410 IPR005587 Uncharacterised protein family UPF0304, YfbU IF561_08410 IPR023146 YfbU, alpha-helical bundle domain superfamily IF561_08410 IPR023145 YfbU, helix-hairpin domain superfamily IF561_08415 IPR010650 PrkA C-terminal domain IF561_08415 IPR016230 Serine-protein kinase, PrkA IF561_08415 IPR013153 PrkA AAA domain IF561_08415 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08420 IPR006698 Uncharacterised protein family UPF0229 IF561_08425 IPR007390 Sporulation stage V, protein R IF561_08430 IPR003329 Acylneuraminate cytidylyltransferase IF561_08430 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase IF561_08430 IPR029044 Nucleotide-diphospho-sugar transferases IF561_08435 IPR005651 Trm112-like IF561_08440 IPR003758 Tetraacyldisaccharide 4'-kinase IF561_08440 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08445 IPR011917 ABC transporter, lipid A export, MsbA IF561_08445 IPR017871 ABC transporter, conserved site IF561_08445 IPR003439 ABC transporter-like IF561_08445 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08445 IPR011527 ABC transporter type 1, transmembrane domain IF561_08445 IPR003593 AAA+ ATPase domain IF561_08445 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_08445 IPR039421 Type I protein exporter IF561_08450 IPR004797 Competence protein ComEC/Rec2 IF561_08450 IPR004477 ComEC/Rec2-related protein IF561_08450 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IF561_08450 IPR001279 Metallo-beta-lactamase IF561_08450 IPR035681 ComA-like, MBL domain IF561_08450 IPR025405 Domain of unknown function DUF4131 IF561_08460 IPR003838 ABC transporter permease protein domain IF561_08460 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E IF561_08460 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type IF561_08460 IPR025857 MacB-like periplasmic core domain IF561_08465 IPR011924 Lipoprotein releasing system, ATP-binding protein IF561_08465 IPR003593 AAA+ ATPase domain IF561_08465 IPR003439 ABC transporter-like IF561_08465 IPR017871 ABC transporter, conserved site IF561_08465 IPR015854 ABC transporter, lipoprotein release, LolD IF561_08465 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08470 IPR003838 ABC transporter permease protein domain IF561_08470 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E IF561_08470 IPR025857 MacB-like periplasmic core domain IF561_08480 IPR005118 Transcription-repair-coupling factor, C-terminal domain IF561_08480 IPR011545 DEAD/DEAH box helicase domain IF561_08480 IPR037235 TRCF-like, C-terminal domain IF561_08480 IPR041471 UvrB, interaction domain IF561_08480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08480 IPR003711 CarD-like/TRCF domain IF561_08480 IPR001650 Helicase, C-terminal IF561_08480 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_08480 IPR036101 CarD-like/TRCF domain superfamily IF561_08480 IPR004576 Transcription-repair coupling factor IF561_08495 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_08495 IPR023753 FAD/NAD(P)-binding domain IF561_08500 IPR029058 Alpha/Beta hydrolase fold IF561_08500 IPR022987 Uncharacterised protein family UPF0227 IF561_08500 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA IF561_08510 IPR012640 Membrane lipoprotein, lipid attachment site IF561_08510 IPR014094 Penicillin-binding protein activator LpoB IF561_08525 IPR036265 HIT-like superfamily IF561_08525 IPR011146 HIT-like domain IF561_08525 IPR001310 Histidine triad (HIT) protein IF561_08525 IPR019808 Histidine triad, conserved site IF561_08530 IPR004090 Chemotaxis methyl-accepting receptor IF561_08530 IPR003660 HAMP domain IF561_08530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_08540 IPR018016 Nucleoside phosphorylase, conserved site IF561_08540 IPR000845 Nucleoside phosphorylase domain IF561_08540 IPR035994 Nucleoside phosphorylase superfamily IF561_08540 IPR010058 Uridine phosphorylase IF561_08545 IPR001757 P-type ATPase IF561_08545 IPR036163 Heavy metal-associated domain superfamily IF561_08545 IPR006121 Heavy metal-associated domain, HMA IF561_08545 IPR017969 Heavy-metal-associated, conserved site IF561_08545 IPR023214 HAD superfamily IF561_08545 IPR027256 P-type ATPase, subfamily IB IF561_08545 IPR008250 P-type ATPase, A domain superfamily IF561_08545 IPR023298 P-type ATPase, transmembrane domain superfamily IF561_08545 IPR018303 P-type ATPase, phosphorylation site IF561_08545 IPR023299 P-type ATPase, cytoplasmic domain N IF561_08545 IPR036412 HAD-like superfamily IF561_08550 IPR013785 Aldolase-type TIM barrel IF561_08550 IPR000644 CBS domain IF561_08550 IPR005990 Inosine-5'-monophosphate dehydrogenase IF561_08550 IPR015875 IMP dehydrogenase / GMP reductase, conserved site IF561_08550 IPR001093 IMP dehydrogenase/GMP reductase IF561_08555 IPR028348 FAD dependent protein IF561_08555 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_08560 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_08560 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_08560 IPR000813 7Fe ferredoxin IF561_08560 IPR022569 Ferredoxin, C-terminal IF561_08565 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_08565 IPR029028 Alpha/beta knot methyltransferases IF561_08565 IPR029064 50S ribosomal protein L30e-like IF561_08565 IPR001537 tRNA/rRNA methyltransferase, SpoU type IF561_08565 IPR013123 RNA 2-O ribose methyltransferase, substrate binding IF561_08575 IPR003660 HAMP domain IF561_08575 IPR029787 Nucleotide cyclase IF561_08575 IPR033417 Periplasmic sensor domain CHASE8 IF561_08575 IPR000160 GGDEF domain IF561_08585 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_08585 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IF561_08585 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IF561_08590 IPR039366 YscW/ExsB IF561_08595 IPR029069 HotDog domain superfamily IF561_08595 IPR003703 Acyl-CoA thioesterase IF561_08605 IPR036390 Winged helix DNA-binding domain superfamily IF561_08605 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_08605 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_08605 IPR011991 ArsR-like helix-turn-helix domain IF561_08605 IPR019888 Transcription regulator AsnC-type IF561_08605 IPR011008 Dimeric alpha-beta barrel IF561_08605 IPR000485 AsnC-type HTH domain IF561_08605 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_08610 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site IF561_08610 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_08610 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA IF561_08610 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_08630 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_08630 IPR001036 Acriflavin resistance protein IF561_08635 IPR006143 RND efflux pump, membrane fusion protein IF561_08635 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_08635 IPR022824 Multidrug resistance protein MdtA IF561_08680 IPR023727 Lysophospholipid transporter LplT IF561_08680 IPR036259 MFS transporter superfamily IF561_08680 IPR011701 Major facilitator superfamily IF561_08685 IPR018383 Uncharacterised protein family UPF0324, prokaryote IF561_08695 IPR025110 AMP-binding enzyme, C-terminal domain IF561_08695 IPR020845 AMP-binding, conserved site IF561_08695 IPR000873 AMP-dependent synthetase/ligase IF561_08695 IPR042099 AMP-dependent synthetase-like superfamily IF561_08695 IPR010192 2-succinylbenzoate--CoA ligase IF561_08700 IPR036849 Enolase-like, C-terminal domain superfamily IF561_08700 IPR029017 Enolase-like, N-terminal IF561_08700 IPR029065 Enolase C-terminal domain-like IF561_08700 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IF561_08700 IPR010196 o-Succinylbenzoate synthase, MenC type1 IF561_08705 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_08705 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_08705 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB IF561_08705 IPR001753 Enoyl-CoA hydratase/isomerase IF561_08705 IPR029045 ClpP/crotonase-like domain superfamily IF561_08710 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase IF561_08710 IPR000073 Alpha/beta hydrolase fold-1 IF561_08710 IPR029058 Alpha/Beta hydrolase fold IF561_08715 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_08715 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase IF561_08715 IPR032264 Menaquinone biosynthesis protein MenD, middle domain IF561_08715 IPR029061 Thiamin diphosphate-binding fold IF561_08715 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IF561_08715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IF561_08720 IPR005801 ADC synthase IF561_08720 IPR015890 Chorismate-utilising enzyme, C-terminal IF561_08720 IPR004561 Isochorismate synthase IF561_08720 IPR034681 Isochorismate synthase MenF IF561_08725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_08725 IPR004839 Aminotransferase, class I/classII IF561_08725 IPR015424 Pyridoxal phosphate-dependent transferase IF561_08725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_08730 IPR003607 HD/PDEase domain IF561_08730 IPR022971 5'-deoxynucleotidase YfbR IF561_08730 IPR039356 Metal-dependent nucleoside 5'-monophosphatase IF561_08735 IPR006261 dNTP triphosphohydrolase IF561_08735 IPR023023 dNTP triphosphohydrolase, type 2 IF561_08735 IPR003607 HD/PDEase domain IF561_08735 IPR006674 HD domain IF561_08735 IPR026875 Phosphohydrolase-associated domain IF561_08750 IPR004509 Competence protein ComEA, helix-hairpin-helix domain IF561_08750 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IF561_08750 IPR010994 RuvA domain 2-like IF561_08755 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IF561_08755 IPR027304 Trigger factor/SurA domain superfamily IF561_08755 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site IF561_08760 IPR020816 Histone-like DNA-binding protein, conserved site IF561_08760 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_08760 IPR000119 Histone-like DNA-binding protein IF561_08765 IPR027543 Lon protease, bacterial IF561_08765 IPR004815 Lon protease, bacterial/eukaryotic-type IF561_08765 IPR008269 Peptidase S16, Lon proteolytic domain IF561_08765 IPR027065 Lon protease IF561_08765 IPR003111 Lon, substrate-binding domain IF561_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08765 IPR015947 PUA-like superfamily IF561_08765 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_08765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_08765 IPR003593 AAA+ ATPase domain IF561_08765 IPR003959 ATPase, AAA-type, core IF561_08770 IPR010603 Zinc finger, ClpX C4-type IF561_08770 IPR038366 Zinc finger, ClpX C4-type superfamily IF561_08770 IPR004487 Clp protease, ATP-binding subunit ClpX IF561_08770 IPR003593 AAA+ ATPase domain IF561_08770 IPR019489 Clp ATPase, C-terminal IF561_08770 IPR003959 ATPase, AAA-type, core IF561_08770 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08775 IPR029045 ClpP/crotonase-like domain superfamily IF561_08775 IPR033135 ClpP, histidine active site IF561_08775 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IF561_08775 IPR001907 ATP-dependent Clp protease proteolytic subunit IF561_08775 IPR018215 ClpP, Ser active site IF561_08780 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_08780 IPR005215 Trigger factor IF561_08780 IPR037041 Trigger factor, C-terminal domain superfamily IF561_08780 IPR008881 Trigger factor, ribosome-binding, bacterial IF561_08780 IPR036611 Trigger factor ribosome-binding domain superfamily IF561_08780 IPR027304 Trigger factor/SurA domain superfamily IF561_08780 IPR008880 Trigger factor, C-terminal IF561_08790 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) IF561_08790 IPR033479 Double Cache domain 1 IF561_08790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_08790 IPR005467 Histidine kinase domain IF561_08790 IPR003594 Histidine kinase/HSP90-like ATPase IF561_08790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_08790 IPR029151 Periplasmic sensor-like domain superfamily IF561_08790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_08790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_08795 IPR003593 AAA+ ATPase domain IF561_08795 IPR011006 CheY-like superfamily IF561_08795 IPR009057 Homeobox-like domain superfamily IF561_08795 IPR002197 DNA binding HTH domain, Fis-type IF561_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08795 IPR001789 Signal transduction response regulator, receiver domain IF561_08795 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_08795 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_08795 IPR025944 Sigma-54 interaction domain, conserved site IF561_08795 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_08805 IPR004681 TRAP transporter large membrane protein DctM IF561_08805 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IF561_08810 IPR007387 TRAP transporter, small membrane protein DctQ IF561_08815 IPR018389 TRAP transporter solute receptor DctP/TeaA IF561_08815 IPR004682 TRAP transporter solute receptor, DctP family IF561_08815 IPR038404 TRAP transporter solute receptor DctP superfamily IF561_08820 IPR003846 Protein adenylyltransferase SelO IF561_08840 IPR036291 NAD(P)-binding domain superfamily IF561_08840 IPR006037 Regulator of K+ conductance, C-terminal IF561_08840 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_08840 IPR003148 Regulator of K+ conductance, N-terminal IF561_08845 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_08845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_08845 IPR001650 Helicase, C-terminal IF561_08845 IPR028622 ATP-dependent RNA helicase RhlE IF561_08845 IPR011545 DEAD/DEAH box helicase domain IF561_08845 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_08845 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_08850 IPR000644 CBS domain IF561_08850 IPR002550 CNNM, transmembrane domain IF561_08850 IPR036318 FAD-binding, type PCMH-like superfamily IF561_08850 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_08850 IPR005170 Transporter-associated domain IF561_08860 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_08860 IPR006905 Flavin-dependent halogenase IF561_08885 IPR009081 Phosphopantetheine binding ACP domain IF561_08885 IPR036736 ACP-like superfamily IF561_08885 IPR003231 Acyl carrier protein (ACP) IF561_08885 IPR006162 Phosphopantetheine attachment site IF561_08890 IPR003231 Acyl carrier protein (ACP) IF561_08890 IPR036736 ACP-like superfamily IF561_08890 IPR009081 Phosphopantetheine binding ACP domain IF561_08905 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IF561_08905 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IF561_08905 IPR029069 HotDog domain superfamily IF561_08910 IPR039528 DPM1-like IF561_08910 IPR001173 Glycosyltransferase 2-like IF561_08910 IPR029044 Nucleotide-diphospho-sugar transferases IF561_08915 IPR008948 L-Aspartase-like IF561_08915 IPR022313 Phenylalanine/histidine ammonia-lyases, active site IF561_08915 IPR024083 Fumarase/histidase, N-terminal IF561_08915 IPR001106 Aromatic amino acid lyase IF561_08915 IPR005921 Histidine ammonia-lyase IF561_08940 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IF561_08940 IPR000794 Beta-ketoacyl synthase IF561_08940 IPR018201 Beta-ketoacyl synthase, active site IF561_08940 IPR014031 Beta-ketoacyl synthase, C-terminal IF561_08940 IPR014030 Beta-ketoacyl synthase, N-terminal IF561_08940 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IF561_08940 IPR016039 Thiolase-like IF561_08945 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IF561_08945 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IF561_08945 IPR029069 HotDog domain superfamily IF561_08950 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_08950 IPR036291 NAD(P)-binding domain superfamily IF561_08950 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative IF561_08955 IPR016039 Thiolase-like IF561_08955 IPR014030 Beta-ketoacyl synthase, N-terminal IF561_08955 IPR014031 Beta-ketoacyl synthase, C-terminal IF561_08955 IPR018201 Beta-ketoacyl synthase, active site IF561_08955 IPR000794 Beta-ketoacyl synthase IF561_08955 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IF561_08955 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IF561_08965 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA IF561_08965 IPR000477 Reverse transcriptase domain IF561_08975 IPR006120 Resolvase, HTH domain IF561_08975 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IF561_08975 IPR006119 Resolvase, N-terminal catalytic domain IF561_08975 IPR006118 Recombinase, conserved site IF561_08975 IPR009057 Homeobox-like domain superfamily IF561_09000 IPR002104 Integrase, catalytic domain IF561_09000 IPR010998 Integrase/recombinase, N-terminal IF561_09000 IPR011010 DNA breaking-rejoining enzyme, catalytic core IF561_09000 IPR013762 Integrase-like, catalytic domain superfamily IF561_09010 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase IF561_09010 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IF561_09010 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site IF561_09010 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IF561_09010 IPR036291 NAD(P)-binding domain superfamily IF561_09015 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_09015 IPR002668 Concentrative nucleoside transporter N-terminal domain IF561_09015 IPR008276 Concentrative nucleoside transporter IF561_09015 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial IF561_09015 IPR011657 Concentrative nucleoside transporter C-terminal domain IF561_09020 IPR005119 LysR, substrate-binding IF561_09020 IPR000847 Transcription regulator HTH, LysR IF561_09020 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_09020 IPR036390 Winged helix DNA-binding domain superfamily IF561_09025 IPR023346 Lysozyme-like domain superfamily IF561_09025 IPR031304 Transglycosylase SLT domain 2 IF561_09025 IPR011757 Lytic transglycosylase MltB IF561_09030 IPR038068 YcgL-like superfamily IF561_09030 IPR027354 YcgL domain IF561_09035 IPR007874 Septum formation inhibitor MinC, N-terminal IF561_09035 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal IF561_09035 IPR013033 Septum formation inhibitor MinC IF561_09035 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily IF561_09035 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily IF561_09035 IPR005526 Septum formation inhibitor MinC, C-terminal IF561_09040 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09040 IPR025501 ATP binding protein MinD IF561_09040 IPR010223 ATP binding protein MinD, bacterial-type IF561_09040 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IF561_09045 IPR005527 Cell division topological specificity factor MinE IF561_09045 IPR036707 Cell division topological specificity factor MinE superfamily IF561_09050 IPR036397 Ribonuclease H superfamily IF561_09050 IPR012337 Ribonuclease H-like superfamily IF561_09050 IPR002121 HRDC domain IF561_09050 IPR010997 HRDC-like superfamily IF561_09050 IPR006292 Ribonuclease D IF561_09050 IPR002562 3'-5' exonuclease domain IF561_09055 IPR025110 AMP-binding enzyme, C-terminal domain IF561_09055 IPR020845 AMP-binding, conserved site IF561_09055 IPR000873 AMP-dependent synthetase/ligase IF561_09055 IPR042099 AMP-dependent synthetase-like superfamily IF561_09060 IPR029058 Alpha/Beta hydrolase fold IF561_09060 IPR000073 Alpha/beta hydrolase fold-1 IF561_09060 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase IF561_09075 IPR000905 Gcp-like domain IF561_09075 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IF561_09080 IPR006555 ATP-dependent helicase, C-terminal IF561_09080 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IF561_09080 IPR006935 Helicase/UvrB, N-terminal IF561_09080 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_09080 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09085 IPR002912 ACT domain IF561_09085 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain IF561_09085 IPR002376 Formyl transferase, N-terminal IF561_09085 IPR036477 Formyl transferase, N-terminal domain superfamily IF561_09085 IPR004810 Formyltetrahydrofolate deformylase IF561_09090 IPR010393 Protein of unknown function DUF991 IF561_09090 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_09095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09095 IPR001278 Arginine-tRNA ligase IF561_09095 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_09095 IPR008909 DALR anticodon binding IF561_09095 IPR035684 Arginyl-tRNA synthetase, catalytic core domain IF561_09095 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_09095 IPR005148 Arginyl tRNA synthetase N-terminal domain IF561_09095 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IF561_09110 IPR005225 Small GTP-binding protein domain IF561_09110 IPR003373 Ferrous iron transport protein B IF561_09110 IPR011640 Ferrous iron transport protein B, C-terminal IF561_09110 IPR041069 FeoB, cytosolic helical domain IF561_09110 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09110 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_09110 IPR030389 FeoB-type guanine nucleotide-binding (G) domain IF561_09115 IPR008988 Transcriptional repressor, C-terminal IF561_09115 IPR038157 Ferrous iron transporter, core domain IF561_09115 IPR007167 Ferrous iron transporter FeoA domain IF561_09120 IPR020449 Transcription regulator HTH, AraC- type IF561_09120 IPR009057 Homeobox-like domain superfamily IF561_09120 IPR018060 DNA binding HTH domain, AraC-type IF561_09120 IPR014710 RmlC-like jelly roll fold IF561_09120 IPR011051 RmlC-like cupin domain superfamily IF561_09120 IPR003313 AraC-type arabinose-binding/dimerisation domain IF561_09120 IPR023609 Transcription regulator HTH, RhaS IF561_09125 IPR006128 Adhesion lipoprotein IF561_09125 IPR006127 Periplasmic solute binding protein, ZnuA-like IF561_09125 IPR035520 High-affinity zinc uptake system protein ZnuA IF561_09130 IPR003593 AAA+ ATPase domain IF561_09130 IPR003439 ABC transporter-like IF561_09130 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09130 IPR017882 Zinc import ATP-binding protein ZnuC IF561_09135 IPR001626 ABC transporter, TroCD-like IF561_09135 IPR037294 ABC transporter, BtuC-like IF561_09140 IPR016102 Succinyl-CoA synthetase-like IF561_09140 IPR036291 NAD(P)-binding domain superfamily IF561_09140 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IF561_09140 IPR005810 Succinyl-CoA ligase, alpha subunit IF561_09140 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IF561_09140 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IF561_09140 IPR003781 CoA-binding IF561_09145 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IF561_09145 IPR013815 ATP-grasp fold, subdomain 1 IF561_09145 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IF561_09145 IPR011761 ATP-grasp fold IF561_09145 IPR005809 Succinate--CoA synthetase, beta subunit IF561_09145 IPR016102 Succinyl-CoA synthetase-like IF561_09145 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IF561_09150 IPR006255 Dihydrolipoamide succinyltransferase IF561_09150 IPR036625 E3-binding domain superfamily IF561_09150 IPR004167 Peripheral subunit-binding domain IF561_09150 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_09150 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IF561_09150 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IF561_09150 IPR000089 Biotin/lipoyl attachment IF561_09150 IPR011053 Single hybrid motif IF561_09155 IPR005475 Transketolase-like, pyrimidine-binding domain IF561_09155 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain IF561_09155 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily IF561_09155 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal IF561_09155 IPR001017 Dehydrogenase, E1 component IF561_09155 IPR011603 2-oxoglutarate dehydrogenase E1 component IF561_09155 IPR029061 Thiamin diphosphate-binding fold IF561_09160 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_09160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_09160 IPR012675 Beta-grasp domain superfamily IF561_09160 IPR009051 Alpha-helical ferredoxin IF561_09160 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein IF561_09160 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal IF561_09160 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_09160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_09165 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IF561_09165 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IF561_09165 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_09165 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IF561_09165 IPR011281 Succinate dehydrogenase, flavoprotein subunit IF561_09165 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IF561_09165 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IF561_09165 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit IF561_09170 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IF561_09170 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor IF561_09170 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IF561_09175 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IF561_09175 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit IF561_09175 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site IF561_09175 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IF561_09180 IPR010953 Citrate synthase, type I IF561_09180 IPR036969 Citrate synthase superfamily IF561_09180 IPR024176 Citrate synthase, bacterial-type IF561_09180 IPR019810 Citrate synthase active site IF561_09180 IPR002020 Citrate synthase IF561_09180 IPR016142 Citrate synthase-like, large alpha subdomain IF561_09180 IPR016143 Citrate synthase-like, small alpha subdomain IF561_09185 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 IF561_09185 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily IF561_09195 IPR016066 Alpha-D-phosphohexomutase, conserved site IF561_09195 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IF561_09195 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IF561_09195 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IF561_09195 IPR005843 Alpha-D-phosphohexomutase, C-terminal IF561_09195 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IF561_09195 IPR005852 Phosphoglucomutase, alpha-D-glucose specific IF561_09195 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IF561_09200 IPR005621 Negative modulator of initiation of replication SeqA IF561_09200 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain IF561_09200 IPR013321 Arc-type ribbon-helix-helix IF561_09200 IPR010985 Ribbon-helix-helix IF561_09200 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily IF561_09200 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal IF561_09205 IPR000073 Alpha/beta hydrolase fold-1 IF561_09205 IPR029058 Alpha/Beta hydrolase fold IF561_09215 IPR001226 Flavodoxin, conserved site IF561_09215 IPR010086 Flavodoxin, long chain IF561_09215 IPR029039 Flavoprotein-like superfamily IF561_09215 IPR008254 Flavodoxin/nitric oxide synthase IF561_09225 IPR002481 Ferric-uptake regulator IF561_09225 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_09225 IPR036390 Winged helix DNA-binding domain superfamily IF561_09230 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal IF561_09230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09230 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain IF561_09230 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IF561_09230 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_09230 IPR022861 Glutamine-tRNA ligase, bacterial IF561_09230 IPR004514 Glutamine-tRNA synthetase IF561_09230 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily IF561_09230 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IF561_09230 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily IF561_09235 IPR003352 Phosphotransferase system, EIIC IF561_09235 IPR036878 Glucose permease domain IIB IF561_09235 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_09235 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component IF561_09235 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_09235 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_09240 IPR032466 Metal-dependent hydrolase IF561_09240 IPR011059 Metal-dependent hydrolase, composite domain superfamily IF561_09240 IPR003764 N-acetylglucosamine-6-phosphate deacetylase IF561_09240 IPR006680 Amidohydrolase-related IF561_09245 IPR036390 Winged helix DNA-binding domain superfamily IF561_09245 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_09245 IPR000600 ROK family IF561_09245 IPR000835 MarR-type HTH domain IF561_09250 IPR006153 Cation/H+ exchanger IF561_09250 IPR004771 K+/H+ exchanger IF561_09250 IPR036291 NAD(P)-binding domain superfamily IF561_09250 IPR003148 Regulator of K+ conductance, N-terminal IF561_09250 IPR038770 Sodium/solute symporter superfamily IF561_09255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09255 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_09255 IPR017932 Glutamine amidotransferase type 2 domain IF561_09255 IPR001962 Asparagine synthase IF561_09255 IPR033738 Asparagine synthase, N-terminal domain IF561_09255 IPR006426 Asparagine synthase, glutamine-hydrolyzing IF561_09260 IPR006645 NusG, N-terminal IF561_09260 IPR036735 NusG, N-terminal domain superfamily IF561_09260 IPR010215 Transcription antitermination protein RfaH IF561_09265 IPR005279 Dipeptide/tripeptide permease IF561_09265 IPR020846 Major facilitator superfamily domain IF561_09265 IPR036259 MFS transporter superfamily IF561_09265 IPR000109 Proton-dependent oligopeptide transporter family IF561_09265 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site IF561_09270 IPR033659 Ferrochelatase, N-terminal IF561_09270 IPR019772 Ferrochelatase, active site IF561_09270 IPR001015 Ferrochelatase IF561_09270 IPR033644 Ferrochelatase, C-terminal IF561_09275 IPR000850 Adenylate kinase/UMP-CMP kinase IF561_09275 IPR033690 Adenylate kinase, conserved site IF561_09275 IPR007862 Adenylate kinase, active site lid domain IF561_09275 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09275 IPR006259 Adenylate kinase subfamily IF561_09280 IPR003594 Histidine kinase/HSP90-like ATPase IF561_09280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_09280 IPR019805 Heat shock protein Hsp90, conserved site IF561_09280 IPR037196 HSP90, C-terminal domain IF561_09280 IPR001404 Heat shock protein Hsp90 family IF561_09280 IPR020575 Heat shock protein Hsp90, N-terminal IF561_09280 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_09285 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_09285 IPR039420 Transcriptional regulatory protein WalR-like IF561_09285 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_09285 IPR016032 Signal transduction response regulator, C-terminal effector IF561_09290 IPR035288 Trans-membrane regulatory protein ToxS IF561_09305 IPR029052 Metallo-dependent phosphatase-like IF561_09305 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type IF561_09305 IPR041802 YfcE-like, metallophosphatase domain IF561_09305 IPR020935 Phosphodiesterase YfcE, conserved site IF561_09305 IPR000979 Phosphodiesterase MJ0936/Vps29 IF561_09320 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B IF561_09325 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B IF561_09330 IPR010099 Epimerase family protein SDR39U1 IF561_09330 IPR001509 NAD-dependent epimerase/dehydratase IF561_09330 IPR036291 NAD(P)-binding domain superfamily IF561_09330 IPR013549 Domain of unknown function DUF1731 IF561_09335 IPR036291 NAD(P)-binding domain superfamily IF561_09335 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_09335 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_09340 IPR013766 Thioredoxin domain IF561_09340 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_09340 IPR036249 Thioredoxin-like superfamily IF561_09345 IPR001107 Band 7 domain IF561_09345 IPR036013 Band 7/SPFH domain superfamily IF561_09345 IPR018080 Band 7/stomatin-like, conserved site IF561_09345 IPR032435 Band 7, C-terminal extension IF561_09345 IPR001972 Stomatin family IF561_09360 IPR005318 Outer membrane porin, bacterial IF561_09360 IPR023614 Porin domain superfamily IF561_09365 IPR010994 RuvA domain 2-like IF561_09365 IPR033136 NAD-dependent DNA ligase, conserved site IF561_09365 IPR041663 DisA/LigA, helix-hairpin-helix motif IF561_09365 IPR018239 NAD-dependent DNA ligase, active site IF561_09365 IPR001679 NAD-dependent DNA ligase IF561_09365 IPR013839 NAD-dependent DNA ligase, adenylation IF561_09365 IPR036420 BRCT domain superfamily IF561_09365 IPR001357 BRCT domain IF561_09365 IPR013840 NAD-dependent DNA ligase, N-terminal IF561_09365 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IF561_09365 IPR012340 Nucleic acid-binding, OB-fold IF561_09365 IPR004150 NAD-dependent DNA ligase, OB-fold IF561_09365 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type IF561_09370 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily IF561_09370 IPR007449 ZipA, C-terminal FtsZ-binding domain IF561_09370 IPR011919 Cell division protein ZipA IF561_09375 IPR022985 Sulfate transporter CysZ IF561_09380 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_09380 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site IF561_09380 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_09380 IPR005859 Cysteine synthase CysK IF561_09380 IPR005856 Cysteine synthase IF561_09385 IPR000032 Phosphocarrier protein HPr-like IF561_09385 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site IF561_09385 IPR002114 Phosphotransferase system, HPr serine phosphorylation site IF561_09385 IPR035895 HPr-like superfamily IF561_09390 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_09390 IPR006318 Phosphotransferase system, enzyme I-like IF561_09390 IPR008279 PEP-utilising enzyme, mobile domain IF561_09390 IPR024692 Phosphotransferase system, enzyme I IF561_09390 IPR040442 Pyruvate kinase-like domain superfamily IF561_09390 IPR018274 PEP-utilising enzyme, active site IF561_09390 IPR036618 PtsI, HPr-binding domain superfamily IF561_09390 IPR000121 PEP-utilising enzyme, C-terminal IF561_09390 IPR036637 Phosphohistidine domain superfamily IF561_09390 IPR023151 PEP-utilising enzyme, conserved site IF561_09390 IPR008731 Phosphotransferase system, enzyme I N-terminal IF561_09395 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 IF561_09395 IPR011055 Duplicated hybrid motif IF561_09400 IPR010810 Flagellin hook, IN motif IF561_09400 IPR001029 Flagellin, D0/D1 domain IF561_09400 IPR001492 Flagellin IF561_09405 IPR001492 Flagellin IF561_09405 IPR010810 Flagellin hook, IN motif IF561_09405 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_09405 IPR001029 Flagellin, D0/D1 domain IF561_09410 IPR001029 Flagellin, D0/D1 domain IF561_09410 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_09410 IPR010810 Flagellin hook, IN motif IF561_09410 IPR001492 Flagellin IF561_09415 IPR001029 Flagellin, D0/D1 domain IF561_09415 IPR013384 Flagellar hook-associated protein 3 IF561_09420 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_09420 IPR010810 Flagellin hook, IN motif IF561_09420 IPR002371 Flagellar hook-associated protein 1 IF561_09425 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain IF561_09425 IPR013377 Peptidoglycan hydrolase FlgJ IF561_09425 IPR019301 Flagellar protein FlgJ, N-terminal IF561_09430 IPR001782 Flagellar P-ring protein IF561_09435 IPR000527 Flagellar L-ring protein IF561_09440 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_09440 IPR012834 Flagellar basal-body rod FlgG IF561_09440 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_09440 IPR019776 Flagellar basal body rod protein, conserved site IF561_09440 IPR001444 Flagellar basal body rod protein, N-terminal IF561_09440 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_09445 IPR001444 Flagellar basal body rod protein, N-terminal IF561_09445 IPR019776 Flagellar basal body rod protein, conserved site IF561_09445 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_09445 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_09445 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_09450 IPR011491 Flagellar hook protein FlgE IF561_09450 IPR037058 Flagellar hook protein FlgE superfamily IF561_09450 IPR001444 Flagellar basal body rod protein, N-terminal IF561_09450 IPR019776 Flagellar basal body rod protein, conserved site IF561_09450 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_09450 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_09450 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_09455 IPR025965 FlgD Ig-like domain IF561_09455 IPR025963 FlgD Tudor-like domain IF561_09455 IPR005648 Flagellar hook capping protein IF561_09460 IPR001444 Flagellar basal body rod protein, N-terminal IF561_09460 IPR019776 Flagellar basal body rod protein, conserved site IF561_09460 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_09460 IPR006299 Flagellar basal-body rod protein FlgC IF561_09465 IPR001444 Flagellar basal body rod protein, N-terminal IF561_09465 IPR019776 Flagellar basal body rod protein, conserved site IF561_09465 IPR006300 Flagellar basal-body rod protein FlgB IF561_09470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_09470 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily IF561_09470 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal IF561_09470 IPR000780 MCP methyltransferase, CheR-type IF561_09470 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal IF561_09475 IPR036061 CheW-like domain superfamily IF561_09475 IPR011006 CheY-like superfamily IF561_09475 IPR001789 Signal transduction response regulator, receiver domain IF561_09475 IPR002545 CheW-like domain IF561_09475 IPR024181 Chemotaxis response regulator CheV IF561_09520 IPR006665 OmpA-like domain IF561_09520 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_09520 IPR006664 Outer membrane protein, bacterial IF561_09520 IPR002368 Outer membrane protein, OmpA IF561_09520 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_09520 IPR036737 OmpA-like domain superfamily IF561_09520 IPR000498 Outer membrane protein OmpA-like, transmembrane domain IF561_09525 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IF561_09525 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IF561_09525 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_09525 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IF561_09525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09525 IPR033910 Glutamyl-tRNA synthetase IF561_09525 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IF561_09525 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IF561_09530 IPR018635 Uncharacterised protein family UPF0319 IF561_09535 IPR023614 Porin domain superfamily IF561_09535 IPR033900 Porin domain, Gram-negative type IF561_09535 IPR002299 Porin, Neisseria sp. type IF561_09535 IPR001702 Porin, Gram-negative type IF561_09540 IPR017969 Heavy-metal-associated, conserved site IF561_09540 IPR023214 HAD superfamily IF561_09540 IPR006121 Heavy metal-associated domain, HMA IF561_09540 IPR036163 Heavy metal-associated domain superfamily IF561_09540 IPR027256 P-type ATPase, subfamily IB IF561_09540 IPR001757 P-type ATPase IF561_09540 IPR023299 P-type ATPase, cytoplasmic domain N IF561_09540 IPR018303 P-type ATPase, phosphorylation site IF561_09540 IPR023298 P-type ATPase, transmembrane domain superfamily IF561_09540 IPR008250 P-type ATPase, A domain superfamily IF561_09540 IPR036412 HAD-like superfamily IF561_09555 IPR015883 Glycoside hydrolase family 20, catalytic domain IF561_09555 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain IF561_09555 IPR012291 CBM2, carbohydrate-binding domain superfamily IF561_09555 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily IF561_09555 IPR025705 Beta-hexosaminidase IF561_09555 IPR004867 Chitobiase C-terminal domain IF561_09555 IPR017853 Glycoside hydrolase superfamily IF561_09555 IPR014756 Immunoglobulin E-set IF561_09555 IPR013783 Immunoglobulin-like fold IF561_09555 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal IF561_09555 IPR029018 Beta-hexosaminidase-like, domain 2 IF561_09575 IPR036063 Smr domain superfamily IF561_09575 IPR002625 Smr domain IF561_09580 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IF561_09580 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_09580 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IF561_09580 IPR036986 RNA-binding S4 domain superfamily IF561_09580 IPR002942 RNA-binding S4 domain IF561_09580 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IF561_09580 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_09585 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain IF561_09585 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily IF561_09585 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC IF561_09590 IPR029052 Metallo-dependent phosphatase-like IF561_09590 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_09590 IPR006179 5'-Nucleotidase/apyrase IF561_09590 IPR006146 5'-Nucleotidase, conserved site IF561_09590 IPR036907 5'-Nucleotidase, C-terminal domain superfamily IF561_09590 IPR008334 5'-Nucleotidase, C-terminal IF561_09595 IPR006269 3-deoxy-8-phosphooctulonate synthase IF561_09595 IPR013785 Aldolase-type TIM barrel IF561_09595 IPR006218 DAHP synthetase I/KDSA IF561_09600 IPR032698 Protein SirB1, N-terminal IF561_09600 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_09605 IPR007360 Invasion gene expression up-regulator, SirB IF561_09610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_09610 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific IF561_09610 IPR004556 Methyltransferase HemK-like IF561_09610 IPR025714 Methyltransferase domain IF561_09610 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_09610 IPR040758 Release factor glutamine methyltransferase, N-terminal domain IF561_09615 IPR005139 Peptide chain release factor IF561_09615 IPR000352 Peptide chain release factor class I IF561_09615 IPR004373 Peptide chain release factor 1 IF561_09620 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IF561_09620 IPR036291 NAD(P)-binding domain superfamily IF561_09620 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily IF561_09620 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase IF561_09620 IPR018214 Glutamyl-tRNA reductase, conserved site IF561_09620 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal IF561_09620 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain IF561_09620 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily IF561_09625 IPR029046 Lipoprotein localisation LolA/LolB/LppX IF561_09625 IPR004565 Outer membrane lipoprotein LolB IF561_09630 IPR013750 GHMP kinase, C-terminal domain IF561_09630 IPR036554 GHMP kinase, C-terminal domain superfamily IF561_09630 IPR006204 GHMP kinase N-terminal domain IF561_09630 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase IF561_09630 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_09630 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_09635 IPR005946 Ribose-phosphate pyrophosphokinase IF561_09635 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type IF561_09635 IPR000836 Phosphoribosyltransferase domain IF561_09635 IPR029057 Phosphoribosyltransferase-like IF561_09635 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site IF561_09635 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain IF561_09640 IPR018171 Peptidyl-tRNA hydrolase, conserved site IF561_09640 IPR036416 Peptidyl-tRNA hydrolase superfamily IF561_09640 IPR001328 Peptidyl-tRNA hydrolase IF561_09645 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 IF561_09645 IPR012675 Beta-grasp domain superfamily IF561_09645 IPR031167 OBG-type guanine nucleotide-binding (G) domain IF561_09645 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09645 IPR004095 TGS IF561_09645 IPR012676 TGS-like IF561_09645 IPR023192 TGS-like domain superfamily IF561_09645 IPR013029 YchF, C-terminal domain IF561_09645 IPR041706 YchF, N-terminal IF561_09645 IPR006073 GTP binding domain IF561_09760 IPR002938 FAD-binding domain IF561_09760 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_09760 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IF561_09760 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IF561_09765 IPR002792 TRAM domain IF561_09765 IPR023404 Radical SAM, alpha/beta horseshoe IF561_09765 IPR007197 Radical SAM IF561_09765 IPR020612 Methylthiotransferase, conserved site IF561_09765 IPR038135 Methylthiotransferase, N-terminal domain superfamily IF561_09765 IPR006638 Elp3/MiaB/NifB IF561_09765 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB IF561_09765 IPR013848 Methylthiotransferase, N-terminal IF561_09765 IPR005839 Methylthiotransferase IF561_09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09770 IPR003714 PhoH-like protein IF561_09775 IPR023091 Metalloprotease catalytic domain superfamily, predicted IF561_09775 IPR002036 Endoribonuclease YbeY IF561_09775 IPR020549 Endoribonuclease YbeY, conserved site IF561_09780 IPR005170 Transporter-associated domain IF561_09780 IPR036318 FAD-binding, type PCMH-like superfamily IF561_09780 IPR000644 CBS domain IF561_09780 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_09785 IPR004563 Apolipoprotein N-acyltransferase IF561_09785 IPR003010 Carbon-nitrogen hydrolase IF561_09785 IPR036526 Carbon-nitrogen hydrolase superfamily IF561_09790 IPR009912 Zinc-ribbon containing domain IF561_09795 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IF561_09795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_09795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09795 IPR025709 Leucyl-tRNA synthetase, editing domain IF561_09795 IPR002300 Aminoacyl-tRNA synthetase, class Ia IF561_09795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_09795 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IF561_09795 IPR002302 Leucine-tRNA ligase IF561_09800 IPR007485 LPS-assembly lipoprotein LptE IF561_09805 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IF561_09805 IPR032780 DNA polymerase III subunit delta, C-terminal IF561_09805 IPR010372 DNA polymerase III delta, N-terminal IF561_09805 IPR005790 DNA polymerase III, delta subunit IF561_09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09810 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IF561_09815 IPR029028 Alpha/beta knot methyltransferases IF561_09815 IPR003742 RNA methyltransferase RlmH IF561_09815 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_09820 IPR017790 Penicillin-binding protein 2 IF561_09820 IPR001460 Penicillin-binding protein, transpeptidase IF561_09820 IPR005311 Penicillin-binding protein, dimerisation domain IF561_09820 IPR036138 Penicillin-binding protein, dimerisation domain superfamily IF561_09820 IPR012338 Beta-lactamase/transpeptidase-like IF561_09825 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB IF561_09825 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IF561_09825 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IF561_09830 IPR036908 RlpA-like domain superfamily IF561_09830 IPR012997 Rare lipoprotein A IF561_09830 IPR007730 Sporulation-like domain IF561_09830 IPR036680 Sporulation-like domain superfamily IF561_09830 IPR034718 Endolytic peptidoglycan transglycosylase RlpA IF561_09830 IPR009009 RlpA-like protein, double-psi beta-barrel domain IF561_09835 IPR012338 Beta-lactamase/transpeptidase-like IF561_09835 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IF561_09835 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IF561_09835 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IF561_09835 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IF561_09835 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IF561_09840 IPR007454 Uncharacterised protein family UPF0250 IF561_09840 IPR027471 YbeD-like domain superfamily IF561_09845 IPR000544 Octanoyltransferase IF561_09845 IPR020605 Octanoyltransferase, conserved site IF561_09845 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IF561_09850 IPR013785 Aldolase-type TIM barrel IF561_09850 IPR006638 Elp3/MiaB/NifB IF561_09850 IPR031691 Lipoyl synthase, N-terminal IF561_09850 IPR003698 Lipoyl synthase IF561_09850 IPR007197 Radical SAM IF561_09855 IPR015424 Pyridoxal phosphate-dependent transferase IF561_09855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_09855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_09855 IPR001085 Serine hydroxymethyltransferase IF561_09855 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IF561_09855 IPR039429 Serine hydroxymethyltransferase-like domain IF561_09860 IPR019264 Domain of unknown function DUF2179 IF561_09860 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IF561_09860 IPR003740 Uncharacterised membrane protein YitT IF561_09875 IPR012769 Trehalose-6-phosphate hydrolase IF561_09875 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_09875 IPR013780 Glycosyl hydrolase, all-beta IF561_09875 IPR017853 Glycoside hydrolase superfamily IF561_09875 IPR032091 Maltogenic Amylase, C-terminal IF561_09880 IPR011296 Phosphotransferase system, trehalose-specific IIBC component IF561_09880 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_09880 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_09880 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IF561_09880 IPR036878 Glucose permease domain IIB IF561_09880 IPR003352 Phosphotransferase system, EIIC IF561_09880 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_09885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_09885 IPR028082 Periplasmic binding protein-like I IF561_09885 IPR012771 Trehalose operon repressor IF561_09885 IPR000843 LacI-type HTH domain IF561_09890 IPR006543 Histidinol-phosphate phosphatase IF561_09890 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase IF561_09890 IPR023214 HAD superfamily IF561_09890 IPR006549 HAD-superfamily hydrolase,subfamily IIIA IF561_09890 IPR036412 HAD-like superfamily IF561_09895 IPR003439 ABC transporter-like IF561_09895 IPR017871 ABC transporter, conserved site IF561_09895 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain IF561_09895 IPR018449 NIL domain IF561_09895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_09895 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal IF561_09895 IPR003593 AAA+ ATPase domain IF561_09895 IPR026253 Methionine import ATP-binding protein MetN IF561_09895 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria IF561_09900 IPR035906 MetI-like superfamily IF561_09900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_09905 IPR004872 Lipoprotein NlpA family IF561_09910 IPR016908 Uncharacterised conserved protein UCP029037 IF561_09915 IPR038228 Syd superfamily IF561_09915 IPR009948 Syd IF561_09920 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal IF561_09920 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 IF561_09920 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF IF561_09930 IPR000160 GGDEF domain IF561_09930 IPR029787 Nucleotide cyclase IF561_09935 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily IF561_09935 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal IF561_09935 IPR031100 LOG family IF561_09935 IPR021826 Domain of unknown function DUF3412 IF561_09940 IPR008918 Helix-hairpin-helix motif, class 2 IF561_09940 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IF561_09940 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IF561_09940 IPR020045 DNA polymerase I-like, H3TH domain IF561_09940 IPR038969 Flap endonuclease IF561_09940 IPR029060 PIN-like domain superfamily IF561_09940 IPR002421 5'-3' exonuclease, N-terminal IF561_09940 IPR022895 Flap endonuclease Xni IF561_09945 IPR018524 DNA/RNA non-specific endonuclease, active site IF561_09945 IPR001604 DNA/RNA non-specific endonuclease IF561_09945 IPR020821 Extracellular Endonuclease, subunit A IF561_09945 IPR040255 Non-specific endonuclease IF561_09950 IPR040739 RlmM ferredoxin-like domain IF561_09950 IPR002877 Ribosomal RNA methyltransferase FtsJ domain IF561_09950 IPR011224 Ribosomal RNA large subunit methyltransferase M IF561_09950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_09955 IPR006696 Protein of unknown function DUF423 IF561_09965 IPR005119 LysR, substrate-binding IF561_09965 IPR000847 Transcription regulator HTH, LysR IF561_09965 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_09965 IPR036390 Winged helix DNA-binding domain superfamily IF561_09970 IPR003720 tRNA sulfurtransferase ThiI IF561_09970 IPR004114 THUMP domain IF561_09970 IPR026340 Thiazole biosynthesis domain IF561_09970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_09970 IPR036873 Rhodanese-like domain superfamily IF561_09970 IPR001763 Rhodanese-like domain IF561_09970 IPR020536 Thil, AANH domain IF561_09975 IPR006664 Outer membrane protein, bacterial IF561_09975 IPR006665 OmpA-like domain IF561_09975 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_09975 IPR036737 OmpA-like domain superfamily IF561_09980 IPR000540 Flagellar motor protein MotA, conserved site IF561_09980 IPR002898 MotA/TolQ/ExbB proton channel IF561_09985 IPR003761 Exonuclease VII, small subunit IF561_09985 IPR037004 Exonuclease VII, small subunit superfamily IF561_09990 IPR008949 Isoprenoid synthase domain superfamily IF561_09990 IPR000092 Polyprenyl synthetase IF561_09990 IPR033749 Polyprenyl synthetase, conserved site IF561_09995 IPR033248 Transketolase, C-terminal domain IF561_09995 IPR005477 Deoxyxylulose-5-phosphate synthase IF561_09995 IPR029061 Thiamin diphosphate-binding fold IF561_09995 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IF561_09995 IPR005475 Transketolase-like, pyrimidine-binding domain IF561_09995 IPR020826 Transketolase binding site IF561_09995 IPR005474 Transketolase, N-terminal IF561_10000 IPR026037 Phosphatidylglycerophosphatase A IF561_10000 IPR007686 YutG/PgpA domain IF561_10000 IPR036681 PgpA-like superfamily IF561_10005 IPR006283 Thiamine-monophosphate kinase IF561_10005 IPR010918 PurM-like, C-terminal domain IF561_10005 IPR036921 PurM-like, N-terminal domain superfamily IF561_10005 IPR016188 PurM-like, N-terminal domain IF561_10005 IPR036676 PurM-like, C-terminal domain superfamily IF561_10010 IPR035926 NusB-like superfamily IF561_10010 IPR011605 NusB antitermination factor IF561_10010 IPR006027 NusB/RsmB/TIM44 IF561_10015 IPR034964 Lumazine synthase IF561_10015 IPR002180 Lumazine/riboflavin synthase IF561_10015 IPR036467 Lumazine/riboflavin synthase superfamily IF561_10020 IPR036144 RibA-like superfamily IF561_10020 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB IF561_10020 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IF561_10020 IPR032677 GTP cyclohydrolase II IF561_10025 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IF561_10025 IPR001783 Lumazine-binding protein IF561_10025 IPR026017 Lumazine-binding domain IF561_10025 IPR017938 Riboflavin synthase-like beta-barrel IF561_10030 IPR016192 APOBEC/CMP deaminase, zinc-binding IF561_10030 IPR002125 Cytidine and deoxycytidylate deaminase domain IF561_10030 IPR016193 Cytidine deaminase-like IF561_10030 IPR024072 Dihydrofolate reductase-like domain superfamily IF561_10030 IPR004794 Riboflavin biosynthesis protein RibD IF561_10030 IPR011549 Riboflavin-specific deaminase, C-terminal IF561_10030 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal IF561_10035 IPR005144 ATP-cone domain IF561_10035 IPR003796 Ribonucleotide reductase regulator NrdR-like IF561_10040 IPR016161 Aldehyde/histidinol dehydrogenase IF561_10040 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_10040 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_10040 IPR015590 Aldehyde dehydrogenase domain IF561_10040 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site IF561_10040 IPR012134 Glutamate-5-semialdehyde dehydrogenase IF561_10040 IPR000965 GPR domain IF561_10045 IPR015947 PUA-like superfamily IF561_10045 IPR002478 PUA domain IF561_10045 IPR019797 Glutamate 5-kinase, conserved site IF561_10045 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase IF561_10045 IPR036393 Acetylglutamate kinase-like superfamily IF561_10045 IPR001057 Glutamate/acetylglutamate kinase IF561_10045 IPR041739 Glutamate-5-kinase domain IF561_10045 IPR001048 Aspartate/glutamate/uridylate kinase IF561_10045 IPR011529 Glutamate 5-kinase IF561_10045 IPR036974 PUA domain superfamily IF561_10050 IPR038208 Sigma factor-binding protein Crl superfamily IF561_10050 IPR009986 Sigma factor-binding transcriptional regulator Crl IF561_10055 IPR029058 Alpha/Beta hydrolase fold IF561_10055 IPR010520 UPF0255 family IF561_10060 IPR000836 Phosphoribosyltransferase domain IF561_10060 IPR029057 Phosphoribosyltransferase-like IF561_10060 IPR023747 Xanthine-guanine phosphoribosyltransferase IF561_10065 IPR026033 Azaguanine-like transporters IF561_10065 IPR006043 Xanthine/uracil/vitamin C permease IF561_10070 IPR011650 Peptidase M20, dimerisation domain IF561_10070 IPR002933 Peptidase M20 IF561_10070 IPR001160 Peptidase M20C, Xaa-His dipeptidase IF561_10095 IPR010073 Phosphoribosylformylglycinamidine synthase PurL IF561_10095 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain IF561_10095 IPR010918 PurM-like, C-terminal domain IF561_10095 IPR036676 PurM-like, C-terminal domain superfamily IF561_10095 IPR029062 Class I glutamine amidotransferase-like IF561_10095 IPR036921 PurM-like, N-terminal domain superfamily IF561_10095 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily IF561_10095 IPR017926 Glutamine amidotransferase IF561_10095 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal IF561_10100 IPR000189 Prokaryotic transglycosylase, active site IF561_10100 IPR008258 Transglycosylase SLT domain 1 IF561_10100 IPR023346 Lysozyme-like domain superfamily IF561_10100 IPR023703 Membrane-bound lytic murein transglycosylase F IF561_10100 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_10105 IPR016192 APOBEC/CMP deaminase, zinc-binding IF561_10105 IPR002125 Cytidine and deoxycytidylate deaminase domain IF561_10105 IPR016193 Cytidine deaminase-like IF561_10105 IPR028883 tRNA-specific adenosine deaminase IF561_10110 IPR011540 AbgT, Proteobacteria IF561_10110 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT IF561_10130 IPR001082 Fimbrial protein pilin IF561_10130 IPR012902 Prokaryotic N-terminal methylation site IF561_10130 IPR000983 Bacterial general secretion pathway protein G-type pilin IF561_10135 IPR001082 Fimbrial protein pilin IF561_10135 IPR012902 Prokaryotic N-terminal methylation site IF561_10140 IPR002939 Chaperone DnaJ, C-terminal IF561_10140 IPR001623 DnaJ domain IF561_10140 IPR008971 HSP40/DnaJ peptide-binding IF561_10140 IPR001305 Heat shock protein DnaJ, cysteine-rich domain IF561_10140 IPR036869 Chaperone J-domain superfamily IF561_10140 IPR012724 Chaperone DnaJ IF561_10140 IPR018253 DnaJ domain, conserved site IF561_10140 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IF561_10145 IPR013126 Heat shock protein 70 family IF561_10145 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IF561_10145 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IF561_10145 IPR018181 Heat shock protein 70, conserved site IF561_10145 IPR012725 Chaperone DnaK IF561_10150 IPR018107 Sodium:dicarboxylate symporter, conserved site IF561_10150 IPR036458 Sodium:dicarboxylate symporter superfamily IF561_10150 IPR023954 C4-dicarboxylate transport protein IF561_10150 IPR001991 Sodium:dicarboxylate symporter IF561_10155 IPR000740 GrpE nucleotide exchange factor IF561_10155 IPR013805 GrpE nucleotide exchange factor, coiled-coil IF561_10155 IPR009012 GrpE nucleotide exchange factor, head IF561_10160 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IF561_10160 IPR002504 NAD kinase IF561_10160 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IF561_10160 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal IF561_10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10170 IPR003395 RecF/RecN/SMC, N-terminal IF561_10170 IPR004604 DNA recombination/repair protein RecN IF561_10175 IPR026592 Outer membrane protein assembly factor BamE IF561_10175 IPR037873 BamE-like IF561_10175 IPR007450 Lipoprotein SmpA/OmlA IF561_10180 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IF561_10180 IPR005346 RnfH protein IF561_10180 IPR037021 RnfH superfamily IF561_10185 IPR023393 START-like domain superfamily IF561_10185 IPR005031 Coenzyme Q-binding protein COQ10, START domain IF561_10190 IPR000037 SsrA-binding protein IF561_10190 IPR023620 Small protein B IF561_10190 IPR020081 SsrA-binding protein, conserved site IF561_10215 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal IF561_10215 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_10215 IPR021810 Protein of unknown function DUF3387 IF561_10215 IPR040980 SWI2/SNF2 ATPase IF561_10215 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10215 IPR004473 Restriction endonuclease, type I, HsdR IF561_10225 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily IF561_10225 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain IF561_10225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_10225 IPR004546 Restriction endonuclease, type I, HsdM IF561_10225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_10225 IPR003356 DNA methylase, adenine-specific IF561_10250 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10250 IPR005119 LysR, substrate-binding IF561_10250 IPR036390 Winged helix DNA-binding domain superfamily IF561_10250 IPR000847 Transcription regulator HTH, LysR IF561_10255 IPR000182 GNAT domain IF561_10255 IPR036526 Carbon-nitrogen hydrolase superfamily IF561_10255 IPR003010 Carbon-nitrogen hydrolase IF561_10255 IPR016181 Acyl-CoA N-acyltransferase IF561_10255 IPR001110 Uncharacterised protein family UPF0012, conserved site IF561_10275 IPR005814 Aminotransferase class-III IF561_10275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_10275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_10275 IPR015424 Pyridoxal phosphate-dependent transferase IF561_10280 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IF561_10280 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase IF561_10280 IPR015424 Pyridoxal phosphate-dependent transferase IF561_10280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_10280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_10285 IPR011059 Metal-dependent hydrolase, composite domain superfamily IF561_10285 IPR032466 Metal-dependent hydrolase IF561_10285 IPR033932 YtcJ like IF561_10285 IPR013108 Amidohydrolase 3 IF561_10300 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 IF561_10300 IPR036390 Winged helix DNA-binding domain superfamily IF561_10300 IPR005119 LysR, substrate-binding IF561_10300 IPR000847 Transcription regulator HTH, LysR IF561_10300 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10305 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_10305 IPR006076 FAD dependent oxidoreductase IF561_10305 IPR023080 D-amino acid dehydrogenase DadA IF561_10310 IPR001463 Sodium:alanine symporter IF561_10320 IPR000791 Acetate transporter GPR1/FUN34/SatP family IF561_10325 IPR036573 Carbohydrate-binding module superfamily 5/12 IF561_10325 IPR009470 Chitinase, C-terminal IF561_10325 IPR011583 Chitinase II IF561_10325 IPR029070 Chitinase insertion domain superfamily IF561_10325 IPR001223 Glycoside hydrolase family 18, catalytic domain IF561_10325 IPR017853 Glycoside hydrolase superfamily IF561_10325 IPR013783 Immunoglobulin-like fold IF561_10325 IPR003610 Carbohydrate-binding module family 5/12 IF561_10330 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IF561_10335 IPR025777 GMP synthetase ATP pyrophosphatase domain IF561_10335 IPR029062 Class I glutamine amidotransferase-like IF561_10335 IPR017926 Glutamine amidotransferase IF561_10335 IPR001674 GMP synthase, C-terminal IF561_10335 IPR004739 GMP synthase, glutamine amidotransferase IF561_10335 IPR022955 GMP synthase IF561_10335 IPR022310 NAD/GMP synthase IF561_10335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_10340 IPR013785 Aldolase-type TIM barrel IF561_10340 IPR000644 CBS domain IF561_10340 IPR005990 Inosine-5'-monophosphate dehydrogenase IF561_10340 IPR015875 IMP dehydrogenase / GMP reductase, conserved site IF561_10340 IPR001093 IMP dehydrogenase/GMP reductase IF561_10345 IPR020579 Exonuclease VII, large subunit, C-terminal IF561_10345 IPR003753 Exonuclease VII, large subunit IF561_10345 IPR025824 OB-fold nucleic acid binding domain IF561_10360 IPR005225 Small GTP-binding protein domain IF561_10360 IPR003593 AAA+ ATPase domain IF561_10360 IPR031166 EngA-type guanine nucleotide-binding (G) domain IF561_10360 IPR016484 GTP-binding protein EngA IF561_10360 IPR006073 GTP binding domain IF561_10360 IPR032859 GTPase Der, C-terminal KH-domain-like IF561_10360 IPR015946 K homology domain-like, alpha/beta IF561_10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10365 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IF561_10365 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IF561_10365 IPR002372 Pyrrolo-quinoline quinone repeat IF561_10365 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IF561_10365 IPR017687 Outer membrane protein assembly factor BamB IF561_10370 IPR026039 Uncharacterised protein family UPF0070 IF561_10370 IPR018704 Tetratricopeptide repeat-like domain IF561_10370 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_10375 IPR004154 Anticodon-binding IF561_10375 IPR036621 Anticodon-binding domain superfamily IF561_10375 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_10375 IPR033656 Histidyl-anticodon-binding IF561_10375 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IF561_10375 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IF561_10375 IPR015807 Histidine-tRNA ligase IF561_10380 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type IF561_10380 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial IF561_10380 IPR011005 Dihydropteroate synthase-like IF561_10385 IPR023690 Cytoskeleton protein RodZ IF561_10385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_10385 IPR025194 Domain of unknown function DUF4115 IF561_10385 IPR001387 Cro/C1-type helix-turn-helix domain IF561_10390 IPR027492 Dual-specificity RNA methyltransferase RlmN IF561_10390 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr IF561_10390 IPR007197 Radical SAM IF561_10390 IPR040072 Methyltransferase (Class A) IF561_10390 IPR013785 Aldolase-type TIM barrel IF561_10395 IPR023005 Nucleoside diphosphate kinase, active site IF561_10395 IPR001564 Nucleoside diphosphate kinase IF561_10395 IPR036850 Nucleoside diphosphate kinase-like domain superfamily IF561_10395 IPR034907 Nucleoside diphosphate kinase-like domain IF561_10400 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IF561_10400 IPR008330 Peptidase M17, peptidase B IF561_10400 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IF561_10400 IPR001346 Interferon regulatory factor DNA-binding domain IF561_10405 IPR036762 IscX-like superfamily IF561_10405 IPR007479 ISC system FeS cluster assembly, IscX IF561_10410 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_10410 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_10410 IPR001055 Adrenodoxin IF561_10410 IPR018298 Adrenodoxin, iron-sulphur binding site IF561_10410 IPR012675 Beta-grasp domain superfamily IF561_10410 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria IF561_10415 IPR010236 ISC system FeS cluster assembly, HscA chaperone IF561_10415 IPR013126 Heat shock protein 70 family IF561_10415 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IF561_10415 IPR042039 HscA chaperone, nucleotide-binding domain IF561_10415 IPR018181 Heat shock protein 70, conserved site IF561_10415 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IF561_10420 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain IF561_10420 IPR036869 Chaperone J-domain superfamily IF561_10420 IPR004640 Co-chaperone Hsc20 IF561_10420 IPR001623 DnaJ domain IF561_10420 IPR036386 HscB, C-terminal domain superfamily IF561_10425 IPR000361 FeS cluster biogenesis IF561_10425 IPR016092 FeS cluster insertion protein IF561_10425 IPR035903 HesB-like domain superfamily IF561_10425 IPR011302 Iron-binding protein IscA, proteobacteria IF561_10425 IPR017870 FeS cluster insertion, C-terminal, conserved site IF561_10430 IPR011339 ISC system FeS cluster assembly, IscU scaffold IF561_10430 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal IF561_10435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_10435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_10435 IPR015424 Pyridoxal phosphate-dependent transferase IF561_10435 IPR010240 Cysteine desulfurase IscS IF561_10435 IPR016454 Cysteine desulfurase IF561_10435 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_10435 IPR000192 Aminotransferase class V domain IF561_10440 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10440 IPR000944 Transcription regulator Rrf2-type IF561_10440 IPR036390 Winged helix DNA-binding domain superfamily IF561_10440 IPR010242 Transcription factor HTH, IscR IF561_10440 IPR030489 Transcription regulator Rrf2-type, conserved site IF561_10445 IPR029028 Alpha/beta knot methyltransferases IF561_10445 IPR004384 RNA methyltransferase TrmJ/LasT IF561_10445 IPR001537 tRNA/rRNA methyltransferase, SpoU type IF561_10445 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_10450 IPR000760 Inositol monophosphatase-like IF561_10450 IPR033942 Inositol monophosphatase IF561_10450 IPR020583 Inositol monophosphatase, metal-binding site IF561_10450 IPR020550 Inositol monophosphatase, conserved site IF561_10450 IPR022337 Inositol monophosphatase, SuhB IF561_10455 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IF561_10455 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IF561_10455 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IF561_10455 IPR005665 Protein-export membrane protein SecF, bacterial IF561_10460 IPR001036 Acriflavin resistance protein IF561_10460 IPR005791 Protein translocase subunit SecD IF561_10460 IPR027398 SecD export protein N-terminal TM domain IF561_10460 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IF561_10460 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IF561_10460 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IF561_10465 IPR003849 Preprotein translocase YajC IF561_10470 IPR036511 Queuine tRNA-ribosyltransferase-like IF561_10470 IPR002616 tRNA-guanine(15) transglycosylase-like IF561_10470 IPR004803 tRNA-guanine transglycosylase IF561_10475 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA IF561_10475 IPR042118 QueA, domain 1 IF561_10475 IPR042119 QueA, domain 2 IF561_10475 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily IF561_10485 IPR000644 CBS domain IF561_10490 IPR040442 Pyruvate kinase-like domain superfamily IF561_10490 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_10490 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site IF561_10490 IPR006254 Isocitrate lyase IF561_10490 IPR039556 ICL/PEPM domain IF561_10495 IPR001465 Malate synthase IF561_10495 IPR011076 Malate synthase-like superfamily IF561_10495 IPR019830 Malate synthase, conserved site IF561_10495 IPR006252 Malate synthase A IF561_10500 IPR005119 LysR, substrate-binding IF561_10500 IPR000847 Transcription regulator HTH, LysR IF561_10500 IPR036390 Winged helix DNA-binding domain superfamily IF561_10500 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10505 IPR024706 Peroxiredoxin, AhpC-type IF561_10505 IPR013766 Thioredoxin domain IF561_10505 IPR036249 Thioredoxin-like superfamily IF561_10505 IPR019479 Peroxiredoxin, C-terminal IF561_10505 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IF561_10510 IPR036822 Copper homeostasis (CutC) domain superfamily IF561_10510 IPR023648 Copper homeostasis CutC domain IF561_10510 IPR005627 Copper homeostasis protein CutC IF561_10515 IPR016898 Polyphosphate kinase 2 IF561_10515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10515 IPR022486 Polyphosphate kinase 2, PA0141 IF561_10515 IPR022488 Polyphosphate kinase-2-related IF561_10520 IPR028366 Phosphate transport system protein PhoU IF561_10520 IPR038078 PhoU-like domain superfamily IF561_10520 IPR026022 PhoU domain IF561_10525 IPR003439 ABC transporter-like IF561_10525 IPR005670 Phosphate transport system permease protein 1 IF561_10525 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10525 IPR015850 ABC transporter, phosphate import, PstB IF561_10525 IPR017871 ABC transporter, conserved site IF561_10525 IPR003593 AAA+ ATPase domain IF561_10530 IPR035906 MetI-like superfamily IF561_10530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_10530 IPR005672 Phosphate transport system permease protein PstA IF561_10535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_10535 IPR011864 Phosphate ABC transporter, permease protein PstC IF561_10535 IPR035906 MetI-like superfamily IF561_10540 IPR025198 Polyphosphate kinase N-terminal domain IF561_10540 IPR025200 Polyphosphate kinase C-terminal domain 2 IF561_10540 IPR003414 Polyphosphate kinase IF561_10540 IPR036830 Polyphosphate kinase middle domain superfamily IF561_10540 IPR024953 Polyphosphate kinase middle domain IF561_10540 IPR036832 Polyphosphate kinase N-terminal domain superfamily IF561_10540 IPR041108 Polyphosphate kinase, C-terminal domain 1 IF561_10540 IPR001736 Phospholipase D/Transphosphatidylase IF561_10545 IPR003695 Ppx/GppA phosphatase IF561_10545 IPR030673 Pyrophosphatase, GppA/Ppx-type IF561_10545 IPR022371 Exopolyphosphatase IF561_10550 IPR024370 PBP domain IF561_10550 IPR011862 Phosphate binding protein IF561_10555 IPR013767 PAS fold IF561_10555 IPR003594 Histidine kinase/HSP90-like ATPase IF561_10555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_10555 IPR005467 Histidine kinase domain IF561_10555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_10555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_10555 IPR000014 PAS domain IF561_10555 IPR035965 PAS domain superfamily IF561_10555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_10555 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR IF561_10555 IPR021766 Phosphate regulon sensor protein PhoR IF561_10560 IPR011006 CheY-like superfamily IF561_10560 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_10560 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB IF561_10560 IPR001789 Signal transduction response regulator, receiver domain IF561_10560 IPR039420 Transcriptional regulatory protein WalR-like IF561_10560 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10565 IPR007476 Putative exonuclease, RdgC IF561_10570 IPR032525 Peptidase family U32, C-terminal IF561_10570 IPR001539 Peptidase U32 IF561_10575 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_10575 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_10585 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IF561_10585 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase IF561_10630 IPR018368 ClpA/B, conserved site 1 IF561_10630 IPR003593 AAA+ ATPase domain IF561_10630 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10630 IPR041546 ClpA/ClpB, AAA lid domain IF561_10630 IPR028299 ClpA/B, conserved site 2 IF561_10630 IPR003959 ATPase, AAA-type, core IF561_10630 IPR017730 Chaperonin ClpB IF561_10630 IPR019489 Clp ATPase, C-terminal IF561_10630 IPR036628 Clp, N-terminal domain superfamily IF561_10630 IPR001270 ClpA/B family IF561_10630 IPR004176 Clp, N-terminal IF561_10635 IPR011324 Cytotoxic necrotizing factor-like, catalytic IF561_10635 IPR003730 Multi-copper polyphenol oxidoreductase IF561_10635 IPR038371 Multi-copper polyphenol oxidoreductase superfamily IF561_10640 IPR006225 Pseudouridine synthase, RluC/RluD IF561_10640 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_10640 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_10640 IPR002942 RNA-binding S4 domain IF561_10640 IPR036986 RNA-binding S4 domain superfamily IF561_10640 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_10645 IPR017689 Outer membrane protein assembly factor BamD IF561_10645 IPR039565 Outer membrane lipoprotein BamD-like IF561_10645 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_10650 IPR008258 Transglycosylase SLT domain 1 IF561_10650 IPR000189 Prokaryotic transglycosylase, active site IF561_10650 IPR023346 Lysozyme-like domain superfamily IF561_10655 IPR036567 Ribosome hibernation promotion factor-like IF561_10655 IPR003489 Ribosome hibernation promoting factor/RaiA IF561_10660 IPR018528 Prephenate dehydratase, conserved site IF561_10660 IPR002912 ACT domain IF561_10660 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase IF561_10660 IPR036263 Chorismate mutase type II superfamily IF561_10660 IPR036979 Chorismate mutase domain superfamily IF561_10660 IPR002701 Chorismate mutase II, prokaryotic-type IF561_10660 IPR010952 Chorismate mutase, gammaproteobacteria IF561_10660 IPR001086 Prephenate dehydratase IF561_10665 IPR002786 Inosine/xanthosine triphosphatase IF561_10665 IPR029001 Inosine triphosphate pyrophosphatase-like IF561_10665 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 IF561_10670 IPR013335 Trp repressor, bacterial IF561_10670 IPR038116 TrpR-like superfamily IF561_10670 IPR010921 Trp repressor/replication initiator IF561_10670 IPR000831 Trp repressor IF561_10675 IPR008258 Transglycosylase SLT domain 1 IF561_10675 IPR000189 Prokaryotic transglycosylase, active site IF561_10675 IPR008939 Lytic transglycosylase, superhelical U-shaped IF561_10675 IPR012289 Lytic transglycosylase, superhelical linker IF561_10675 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily IF561_10675 IPR023346 Lysozyme-like domain superfamily IF561_10680 IPR017871 ABC transporter, conserved site IF561_10680 IPR003593 AAA+ ATPase domain IF561_10680 IPR032781 ABC-transporter extension domain IF561_10680 IPR022374 Energy-dependent translational throttle protein EttA IF561_10680 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10680 IPR003439 ABC transporter-like IF561_10685 IPR027021 Cyclic di-GMP binding protein, PA4608 type IF561_10685 IPR009875 PilZ domain IF561_10690 IPR007340 Opacity-associated protein A IF561_10690 IPR011055 Duplicated hybrid motif IF561_10690 IPR016047 Peptidase M23 IF561_10695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_10695 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein IF561_10695 IPR036263 Chorismate mutase type II superfamily IF561_10695 IPR036979 Chorismate mutase domain superfamily IF561_10695 IPR036291 NAD(P)-binding domain superfamily IF561_10695 IPR011277 Chorismate mutase, T-protein IF561_10695 IPR003099 Prephenate dehydrogenase IF561_10695 IPR002701 Chorismate mutase II, prokaryotic-type IF561_10700 IPR013785 Aldolase-type TIM barrel IF561_10700 IPR006218 DAHP synthetase I/KDSA IF561_10700 IPR006219 DHAP synthase, class 1 IF561_10705 IPR001764 Glycoside hydrolase, family 3, N-terminal IF561_10705 IPR022956 Beta-hexosaminidase, bacterial IF561_10705 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily IF561_10705 IPR019800 Glycoside hydrolase, family 3, active site IF561_10705 IPR017853 Glycoside hydrolase superfamily IF561_10710 IPR005338 Anhydro-N-acetylmuramic acid kinase IF561_10715 IPR001347 Sugar isomerase (SIS) IF561_10715 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ IF561_10715 IPR005486 Glucokinase regulatory protein, conserved site IF561_10715 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein IF561_10730 IPR003706 CstA, N-terminal domain IF561_10735 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region IF561_10735 IPR010559 Signal transduction histidine kinase, internal region IF561_10735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_10735 IPR003018 GAF domain IF561_10740 IPR007492 LytTR DNA-binding domain IF561_10740 IPR011006 CheY-like superfamily IF561_10740 IPR001789 Signal transduction response regulator, receiver domain IF561_10745 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IF561_10750 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_10755 IPR001872 Peptidase A8, signal peptidase II IF561_10760 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain IF561_10760 IPR002301 Isoleucine-tRNA ligase IF561_10760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_10760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_10760 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IF561_10760 IPR023585 Isoleucine-tRNA ligase, type 1 IF561_10760 IPR002300 Aminoacyl-tRNA synthetase, class Ia IF561_10760 IPR010663 Zinc finger, FPG/IleRS-type IF561_10760 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IF561_10760 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_10765 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic IF561_10765 IPR023465 Riboflavin kinase domain superfamily IF561_10765 IPR015864 FAD synthetase IF561_10765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_10765 IPR023468 Riboflavin kinase IF561_10765 IPR002606 Riboflavin kinase, bacterial IF561_10770 IPR004268 Peptidoglycan biosynthesis protein MurJ IF561_10775 IPR002583 Ribosomal protein S20 IF561_10775 IPR036510 Ribosomal protein S20 superfamily IF561_10780 IPR011991 ArsR-like helix-turn-helix domain IF561_10780 IPR001845 HTH ArsR-type DNA-binding domain IF561_10780 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10780 IPR036390 Winged helix DNA-binding domain superfamily IF561_10785 IPR036390 Winged helix DNA-binding domain superfamily IF561_10785 IPR005119 LysR, substrate-binding IF561_10785 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10785 IPR000847 Transcription regulator HTH, LysR IF561_10790 IPR003841 Sodium-dependent phosphate transport protein IF561_10790 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein IF561_10800 IPR020940 Thymidylate synthase, active site IF561_10800 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily IF561_10800 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain IF561_10800 IPR000398 Thymidylate synthase IF561_10805 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt IF561_10810 IPR002781 Transmembrane protein TauE-like IF561_10815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_10815 IPR036618 PtsI, HPr-binding domain superfamily IF561_10815 IPR008731 Phosphotransferase system, enzyme I N-terminal IF561_10815 IPR006318 Phosphotransferase system, enzyme I-like IF561_10815 IPR000121 PEP-utilising enzyme, C-terminal IF561_10815 IPR023151 PEP-utilising enzyme, conserved site IF561_10815 IPR018274 PEP-utilising enzyme, active site IF561_10815 IPR008279 PEP-utilising enzyme, mobile domain IF561_10815 IPR029016 GAF-like domain superfamily IF561_10815 IPR003018 GAF domain IF561_10815 IPR036637 Phosphohistidine domain superfamily IF561_10815 IPR040442 Pyruvate kinase-like domain superfamily IF561_10820 IPR020476 NUDIX hydrolase IF561_10820 IPR000086 NUDIX hydrolase domain IF561_10820 IPR020084 NUDIX hydrolase, conserved site IF561_10820 IPR022927 RNA pyrophosphohydrolase RppH IF561_10820 IPR015797 NUDIX hydrolase-like domain superfamily IF561_10825 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II IF561_10825 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily IF561_10825 IPR004230 DNA mismatch repair protein MutH IF561_10825 IPR011335 Restriction endonuclease type II-like IF561_10835 IPR036812 NADP-dependent oxidoreductase domain superfamily IF561_10835 IPR020471 Aldo/keto reductase IF561_10835 IPR023210 NADP-dependent oxidoreductase domain IF561_10845 IPR011006 CheY-like superfamily IF561_10845 IPR009057 Homeobox-like domain superfamily IF561_10845 IPR025944 Sigma-54 interaction domain, conserved site IF561_10845 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_10845 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_10845 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_10845 IPR001789 Signal transduction response regulator, receiver domain IF561_10845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10845 IPR002197 DNA binding HTH domain, Fis-type IF561_10845 IPR003593 AAA+ ATPase domain IF561_10850 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IF561_10850 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_10850 IPR002313 Lysine-tRNA ligase, class II IF561_10850 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IF561_10850 IPR012340 Nucleic acid-binding, OB-fold IF561_10850 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_10860 IPR001667 DDH domain IF561_10860 IPR003156 DHHA1 domain IF561_10860 IPR004610 Bacterial RecJ exonuclease IF561_10860 IPR041122 RecJ, OB domain IF561_10860 IPR038763 DHH phosphoesterase superfamily IF561_10865 IPR033954 Disulphide bond isomerase, DsbC/G IF561_10865 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal IF561_10865 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily IF561_10865 IPR012336 Thioredoxin-like fold IF561_10865 IPR036249 Thioredoxin-like superfamily IF561_10865 IPR017937 Thioredoxin, conserved site IF561_10865 IPR013766 Thioredoxin domain IF561_10870 IPR013762 Integrase-like, catalytic domain superfamily IF561_10870 IPR023009 Tyrosine recombinase XerC/XerD IF561_10870 IPR004107 Integrase, SAM-like, N-terminal IF561_10870 IPR010998 Integrase/recombinase, N-terminal IF561_10870 IPR002104 Integrase, catalytic domain IF561_10870 IPR011932 Tyrosine recombinase XerD IF561_10870 IPR011010 DNA breaking-rejoining enzyme, catalytic core IF561_10875 IPR008254 Flavodoxin/nitric oxide synthase IF561_10875 IPR001226 Flavodoxin, conserved site IF561_10875 IPR010086 Flavodoxin, long chain IF561_10875 IPR029039 Flavoprotein-like superfamily IF561_10880 IPR004685 Branched-chain amino acid transport system II carrier protein IF561_10885 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_10885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_10885 IPR007848 Methyltransferase small domain IF561_10885 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase IF561_10890 IPR001650 Helicase, C-terminal IF561_10890 IPR011545 DEAD/DEAH box helicase domain IF561_10890 IPR028621 ATP-dependent RNA helicase SrmB IF561_10890 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_10890 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_10890 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_10890 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_10895 IPR005583 Peroxide stress protein YaaA IF561_10900 IPR001463 Sodium:alanine symporter IF561_10915 IPR002043 Uracil-DNA glycosylase family 1 IF561_10915 IPR018085 Uracil-DNA glycosylase, active site IF561_10915 IPR005122 Uracil-DNA glycosylase-like IF561_10915 IPR036895 Uracil-DNA glycosylase-like domain superfamily IF561_10920 IPR001719 AP endonuclease 2 IF561_10920 IPR018246 AP endonuclease 2, zinc binding site IF561_10920 IPR036237 Xylose isomerase-like superfamily IF561_10920 IPR013022 Xylose isomerase-like, TIM barrel domain IF561_10925 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_10925 IPR001150 Glycine radical domain IF561_10925 IPR011140 Autonomous glycyl radical cofactor GrcA IF561_10930 IPR004450 Threonine synthase-like IF561_10930 IPR037158 Threonine synthase, N-terminal domain superfamily IF561_10930 IPR029144 Threonine synthase, N-terminal IF561_10930 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_10930 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_10930 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IF561_10935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_10935 IPR013750 GHMP kinase, C-terminal domain IF561_10935 IPR036554 GHMP kinase, C-terminal domain superfamily IF561_10935 IPR006204 GHMP kinase N-terminal domain IF561_10935 IPR006203 GHMP kinase, ATP-binding, conserved site IF561_10935 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_10935 IPR000870 Homoserine kinase IF561_10940 IPR036393 Acetylglutamate kinase-like superfamily IF561_10940 IPR002912 ACT domain IF561_10940 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain IF561_10940 IPR001048 Aspartate/glutamate/uridylate kinase IF561_10940 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IF561_10940 IPR001341 Aspartate kinase IF561_10940 IPR018042 Aspartate kinase, conserved site IF561_10940 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I IF561_10940 IPR027795 CASTOR, ACT domain IF561_10940 IPR036291 NAD(P)-binding domain superfamily IF561_10940 IPR019811 Homoserine dehydrogenase, conserved site IF561_10940 IPR001342 Homoserine dehydrogenase, catalytic IF561_10950 IPR010203 Regulator of ribonuclease activity A IF561_10950 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein IF561_10950 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily IF561_10960 IPR011006 CheY-like superfamily IF561_10960 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_10960 IPR016032 Signal transduction response regulator, C-terminal effector IF561_10960 IPR001789 Signal transduction response regulator, receiver domain IF561_10960 IPR039420 Transcriptional regulatory protein WalR-like IF561_10960 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_10970 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily IF561_10970 IPR001789 Signal transduction response regulator, receiver domain IF561_10970 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB IF561_10970 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_10970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_10970 IPR013767 PAS fold IF561_10970 IPR035965 PAS domain superfamily IF561_10970 IPR000014 PAS domain IF561_10970 IPR036641 HPT domain superfamily IF561_10970 IPR000700 PAS-associated, C-terminal IF561_10970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_10970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_10970 IPR005467 Histidine kinase domain IF561_10970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_10970 IPR003594 Histidine kinase/HSP90-like ATPase IF561_10970 IPR011006 CheY-like superfamily IF561_10970 IPR040642 Histidine kinase receptor ArcB, transmembrane domain IF561_10975 IPR001294 Phytochrome IF561_10975 IPR029016 GAF-like domain superfamily IF561_10975 IPR000160 GGDEF domain IF561_10975 IPR029787 Nucleotide cyclase IF561_10975 IPR016132 Phytochrome chromophore attachment domain IF561_10975 IPR013515 Phytochrome, central region IF561_10975 IPR035919 EAL domain superfamily IF561_10975 IPR003018 GAF domain IF561_10975 IPR001633 EAL domain IF561_10980 IPR023404 Radical SAM, alpha/beta horseshoe IF561_10980 IPR007197 Radical SAM IF561_10980 IPR032432 Radical SAM, C-terminal extension IF561_10980 IPR006638 Elp3/MiaB/NifB IF561_10980 IPR039661 ELP3/YhcC IF561_10980 IPR005911 Protein YhcC-like IF561_10985 IPR017932 Glutamine amidotransferase type 2 domain IF561_10985 IPR002489 Glutamate synthase, alpha subunit, C-terminal IF561_10985 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily IF561_10985 IPR013785 Aldolase-type TIM barrel IF561_10985 IPR006982 Glutamate synthase, central-N IF561_10985 IPR002932 Glutamate synthase domain IF561_10985 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_10990 IPR028261 Dihydroprymidine dehydrogenase domain II IF561_10990 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_10990 IPR023753 FAD/NAD(P)-binding domain IF561_10990 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 IF561_10990 IPR009051 Alpha-helical ferredoxin IF561_10995 IPR017932 Glutamine amidotransferase type 2 domain IF561_10995 IPR002489 Glutamate synthase, alpha subunit, C-terminal IF561_10995 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_10995 IPR002932 Glutamate synthase domain IF561_10995 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily IF561_10995 IPR013785 Aldolase-type TIM barrel IF561_10995 IPR006982 Glutamate synthase, central-N IF561_11000 IPR023753 FAD/NAD(P)-binding domain IF561_11000 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_11000 IPR028261 Dihydroprymidine dehydrogenase domain II IF561_11000 IPR009051 Alpha-helical ferredoxin IF561_11000 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 IF561_11000 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_11010 IPR035994 Nucleoside phosphorylase superfamily IF561_11010 IPR000845 Nucleoside phosphorylase domain IF561_11010 IPR010049 MTA/SAH nucleosidase IF561_11015 IPR004485 Cobalamin biosynthesis CobD/CbiB IF561_11015 IPR031347 Protein AmpE IF561_11020 IPR002491 ABC transporter periplasmic binding domain IF561_11020 IPR023544 ABC transporter, vitamin B12-binding protein IF561_11025 IPR005115 Uncharacterised domain UPF0126 IF561_11030 IPR005119 LysR, substrate-binding IF561_11030 IPR000847 Transcription regulator HTH, LysR IF561_11030 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11030 IPR036390 Winged helix DNA-binding domain superfamily IF561_11035 IPR002781 Transmembrane protein TauE-like IF561_11050 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IF561_11050 IPR011607 Methylglyoxal synthase-like domain IF561_11050 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain IF561_11050 IPR016185 Pre-ATP-grasp domain superfamily IF561_11050 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily IF561_11050 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain IF561_11050 IPR036914 Methylglyoxal synthase-like domain superfamily IF561_11050 IPR006275 Carbamoyl-phosphate synthase, large subunit IF561_11050 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain IF561_11050 IPR011761 ATP-grasp fold IF561_11055 IPR017926 Glutamine amidotransferase IF561_11055 IPR029062 Class I glutamine amidotransferase-like IF561_11055 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily IF561_11055 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain IF561_11055 IPR006274 Carbamoyl-phosphate synthase, small subunit IF561_11055 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain IF561_11060 IPR000846 Dihydrodipicolinate reductase, N-terminal IF561_11060 IPR022664 Dihydrodipicolinate reductase, conserved site IF561_11060 IPR023940 Dihydrodipicolinate reductase IF561_11060 IPR036291 NAD(P)-binding domain superfamily IF561_11060 IPR022663 Dihydrodipicolinate reductase, C-terminal IF561_11065 IPR003561 Mutator MutT IF561_11065 IPR000086 NUDIX hydrolase domain IF561_11065 IPR015797 NUDIX hydrolase-like domain superfamily IF561_11065 IPR020476 NUDIX hydrolase IF561_11065 IPR020084 NUDIX hydrolase, conserved site IF561_11070 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11070 IPR004027 SEC-C motif IF561_11070 IPR000185 Protein translocase subunit SecA IF561_11070 IPR020937 SecA conserved site IF561_11070 IPR011116 SecA Wing/Scaffold IF561_11070 IPR036670 SecA, preprotein cross-linking domain superfamily IF561_11070 IPR036266 SecA, Wing/Scaffold superfamily IF561_11070 IPR014018 SecA motor DEAD IF561_11070 IPR011130 SecA, preprotein cross-linking domain IF561_11070 IPR011115 SecA DEAD-like, N-terminal IF561_11080 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal IF561_11080 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase IF561_11080 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_11080 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal IF561_11085 IPR008280 Tubulin/FtsZ, C-terminal IF561_11085 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IF561_11085 IPR036525 Tubulin/FtsZ, GTPase domain superfamily IF561_11085 IPR003008 Tubulin/FtsZ, GTPase domain IF561_11085 IPR024757 Cell division protein FtsZ, C-terminal IF561_11085 IPR020805 Cell division protein FtsZ, conserved site IF561_11085 IPR000158 Cell division protein FtsZ IF561_11090 IPR020823 Cell division protein FtsA IF561_11090 IPR003494 SHS2 domain inserted in FtsA IF561_11095 IPR005548 Cell division protein FtsQ/DivIB IF561_11095 IPR013685 POTRA domain, FtsQ-type IF561_11095 IPR026579 Cell division protein FtsQ IF561_11095 IPR034746 POTRA domain IF561_11100 IPR036565 Mur-like, catalytic domain superfamily IF561_11100 IPR036615 Mur ligase, C-terminal domain superfamily IF561_11100 IPR005758 UDP-N-acetylmuramate--L-alanine ligase IF561_11100 IPR000713 Mur ligase, N-terminal catalytic domain IF561_11100 IPR004101 Mur ligase, C-terminal IF561_11100 IPR013221 Mur ligase, central IF561_11105 IPR007235 Glycosyl transferase, family 28, C-terminal IF561_11105 IPR006009 N-acetylglucosaminyltransferase, MurG IF561_11105 IPR004276 Glycosyltransferase family 28, N-terminal domain IF561_11110 IPR013437 Probable peptidoglycan glycosyltransferase FtsW IF561_11110 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IF561_11110 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IF561_11115 IPR036565 Mur-like, catalytic domain superfamily IF561_11115 IPR013221 Mur ligase, central IF561_11115 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase IF561_11115 IPR036615 Mur ligase, C-terminal domain superfamily IF561_11115 IPR004101 Mur ligase, C-terminal IF561_11120 IPR000715 Glycosyl transferase, family 4 IF561_11120 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase IF561_11120 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site IF561_11125 IPR013221 Mur ligase, central IF561_11125 IPR036565 Mur-like, catalytic domain superfamily IF561_11125 IPR000713 Mur ligase, N-terminal catalytic domain IF561_11125 IPR035911 MurE/MurF, N-terminal IF561_11125 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase IF561_11125 IPR004101 Mur ligase, C-terminal IF561_11125 IPR036615 Mur ligase, C-terminal domain superfamily IF561_11130 IPR004101 Mur ligase, C-terminal IF561_11130 IPR036615 Mur ligase, C-terminal domain superfamily IF561_11130 IPR013221 Mur ligase, central IF561_11130 IPR036565 Mur-like, catalytic domain superfamily IF561_11130 IPR035911 MurE/MurF, N-terminal IF561_11130 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase IF561_11130 IPR000713 Mur ligase, N-terminal catalytic domain IF561_11135 IPR012338 Beta-lactamase/transpeptidase-like IF561_11135 IPR037532 Peptidoglycan D,D-transpeptidase FtsI IF561_11135 IPR005311 Penicillin-binding protein, dimerisation domain IF561_11135 IPR036138 Penicillin-binding protein, dimerisation domain superfamily IF561_11135 IPR001460 Penicillin-binding protein, transpeptidase IF561_11140 IPR011922 Cell division protein FtsL IF561_11145 IPR002903 Ribosomal RNA small subunit methyltransferase H IF561_11145 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IF561_11145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_11155 IPR035996 Tetrapyrrole methylase superfamily IF561_11155 IPR000878 Tetrapyrrole methylase IF561_11155 IPR014777 Tetrapyrrole methylase, subdomain 1 IF561_11155 IPR014776 Tetrapyrrole methylase, subdomain 2 IF561_11155 IPR008189 rRNA small subunit methyltransferase I IF561_11155 IPR018063 SAM-dependent methyltransferase RsmI, conserved site IF561_11160 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_11160 IPR028082 Periplasmic binding protein-like I IF561_11160 IPR007443 Penicillin-binding protein activator LpoA IF561_11165 IPR003509 Uncharacterised protein family UPF0102 IF561_11165 IPR011856 tRNA endonuclease-like domain superfamily IF561_11165 IPR011335 Restriction endonuclease type II-like IF561_11170 IPR035461 GmhA/DiaA IF561_11170 IPR023070 DnaA initiator-associating protein IF561_11170 IPR001347 Sugar isomerase (SIS) IF561_11175 IPR007055 BON domain IF561_11175 IPR014004 Transport-associated and nodulation domain, bacteria IF561_11180 IPR007481 Stringent starvation protein B IF561_11180 IPR036760 SspB-like superfamily IF561_11185 IPR004045 Glutathione S-transferase, N-terminal IF561_11185 IPR004046 Glutathione S-transferase, C-terminal IF561_11185 IPR036249 Thioredoxin-like superfamily IF561_11185 IPR034341 Stringent starvation protein A, N-terminal IF561_11185 IPR010987 Glutathione S-transferase, C-terminal-like IF561_11185 IPR040079 Glutathione Transferase family IF561_11185 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_11190 IPR036909 Cytochrome c-like domain superfamily IF561_11190 IPR002326 Cytochrome c1 IF561_11190 IPR009056 Cytochrome c-like domain IF561_11195 IPR016174 Di-haem cytochrome, transmembrane IF561_11195 IPR005797 Cytochrome b/b6, N-terminal IF561_11195 IPR036150 Cytochrome b/b6, C-terminal domain superfamily IF561_11195 IPR005798 Cytochrome b/b6, C-terminal IF561_11195 IPR027387 Cytochrome b/b6-like domain superfamily IF561_11195 IPR030689 Cytochrome b IF561_11200 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IF561_11200 IPR017941 Rieske [2Fe-2S] iron-sulphur domain IF561_11200 IPR014349 Rieske iron-sulphur protein IF561_11200 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit IF561_11200 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal IF561_11200 IPR005805 Rieske iron-sulphur protein, C-terminal IF561_11205 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_11205 IPR020574 Ribosomal protein S9, conserved site IF561_11205 IPR023035 Ribosomal protein S9, bacterial/plastid IF561_11205 IPR000754 Ribosomal protein S9 IF561_11205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_11210 IPR036899 Ribosomal protein L13 superfamily IF561_11210 IPR023563 Ribosomal protein L13, conserved site IF561_11210 IPR005823 Ribosomal protein L13, bacterial-type IF561_11210 IPR005822 Ribosomal protein L13 IF561_11215 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11215 IPR030870 Cell division protein ZapE IF561_11215 IPR005654 ATPase, AFG1-like IF561_11220 IPR009386 Protein of unknown function DUF1043 IF561_11225 IPR001478 PDZ domain IF561_11225 IPR011782 Peptidase S1C, Do IF561_11225 IPR001940 Peptidase S1C IF561_11225 IPR009003 Peptidase S1, PA clan IF561_11225 IPR036034 PDZ superfamily IF561_11230 IPR011783 Peptidase S1C, DegS IF561_11230 IPR001940 Peptidase S1C IF561_11230 IPR036034 PDZ superfamily IF561_11230 IPR001478 PDZ domain IF561_11230 IPR009003 Peptidase S1, PA clan IF561_11235 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IF561_11235 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IF561_11235 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IF561_11235 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IF561_11235 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IF561_11235 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IF561_11235 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative IF561_11240 IPR002288 DNA gyrase B subunit, C-terminal IF561_11240 IPR003594 Histidine kinase/HSP90-like ATPase IF561_11240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_11240 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_11240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_11240 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IF561_11240 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IF561_11240 IPR018522 DNA topoisomerase, type IIA, conserved site IF561_11240 IPR006171 TOPRIM domain IF561_11240 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IF561_11240 IPR001241 DNA topoisomerase, type IIA IF561_11240 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative IF561_11245 IPR029058 Alpha/Beta hydrolase fold IF561_11245 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA IF561_11250 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_11250 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA IF561_11250 IPR029052 Metallo-dependent phosphatase-like IF561_11255 IPR009659 Protein of unknown function DUF1249 IF561_11260 IPR004385 Nucleoside diphosphate pyrophosphatase IF561_11260 IPR015797 NUDIX hydrolase-like domain superfamily IF561_11260 IPR020084 NUDIX hydrolase, conserved site IF561_11260 IPR000086 NUDIX hydrolase domain IF561_11265 IPR003423 Outer membrane efflux protein IF561_11265 IPR010130 Type I secretion outer membrane protein, TolC IF561_11270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_11270 IPR029056 Ribokinase-like IF561_11270 IPR011914 RfaE bifunctional protein, domain II IF561_11270 IPR011913 RfaE bifunctional protein, domain I IF561_11270 IPR023030 Bifunctional protein HldE IF561_11270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_11270 IPR004821 Cytidyltransferase-like domain IF561_11270 IPR011611 Carbohydrate kinase PfkB IF561_11275 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain IF561_11275 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme IF561_11275 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase IF561_11280 IPR004090 Chemotaxis methyl-accepting receptor IF561_11280 IPR003660 HAMP domain IF561_11280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_11290 IPR039013 Inorganic triphosphatase YgiF IF561_11290 IPR023577 CYTH domain IF561_11290 IPR033469 CYTH-like domain superfamily IF561_11290 IPR007899 CHAD domain IF561_11295 IPR038078 PhoU-like domain superfamily IF561_11295 IPR002727 Protein of unknown function DUF47 IF561_11295 IPR018445 Putative phosphate transport regulator IF561_11300 IPR001204 Phosphate transporter IF561_11305 IPR016476 SH3 domain protein IF561_11305 IPR003646 SH3-like domain, bacterial-type IF561_11315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11315 IPR002477 Peptidoglycan binding-like IF561_11315 IPR036365 PGBD-like superfamily IF561_11315 IPR036366 PGBD superfamily IF561_11315 IPR003593 AAA+ ATPase domain IF561_11320 IPR006674 HD domain IF561_11320 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain IF561_11320 IPR002646 Poly A polymerase, head domain IF561_11320 IPR003607 HD/PDEase domain IF561_11320 IPR012006 tRNA nucleotidyltransferase, proteobacteria IF561_11325 IPR003824 Undecaprenyl-diphosphatase UppP IF561_11330 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily IF561_11330 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK IF561_11335 IPR006156 Dihydroneopterin aldolase IF561_11335 IPR006157 Dihydroneopterin aldolase/epimerase domain IF561_11340 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY IF561_11345 IPR029058 Alpha/Beta hydrolase fold IF561_11345 IPR000073 Alpha/beta hydrolase fold-1 IF561_11350 IPR017861 Kae1/TsaD family IF561_11350 IPR017860 Peptidase M22, conserved site IF561_11350 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD IF561_11350 IPR000905 Gcp-like domain IF561_11355 IPR018278 Ribosomal protein S21, conserved site IF561_11355 IPR038380 Ribosomal protein S21 superfamily IF561_11355 IPR001911 Ribosomal protein S21 IF561_11360 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IF561_11360 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IF561_11360 IPR019004 Uncharacterised protein YqeY/Aim41 IF561_11360 IPR042184 YqeY/Aim41, N-terminal domain IF561_11365 IPR030846 DNA primase DnaG, bacteria IF561_11365 IPR034151 Bacterial DnaG primase, TOPRIM domain IF561_11365 IPR002694 Zinc finger, CHC2-type IF561_11365 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IF561_11365 IPR013264 DNA primase, catalytic core, N-terminal IF561_11365 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily IF561_11365 IPR019475 DNA primase, DnaB-helicase binding domain IF561_11365 IPR006295 DNA primase, DnaG IF561_11365 IPR013173 DNA primase DnaG, DnaB-binding domain IF561_11365 IPR036977 DNA Primase, CHC2-type zinc finger IF561_11365 IPR006171 TOPRIM domain IF561_11370 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_11370 IPR012760 RNA polymerase sigma factor RpoD, C-terminal IF561_11370 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11370 IPR013325 RNA polymerase sigma factor, region 2 IF561_11370 IPR028630 RNA polymerase sigma factor RpoD IF561_11370 IPR042189 Sigma-70 factor, region 1.1 superfamily IF561_11370 IPR014284 RNA polymerase sigma-70 like domain IF561_11370 IPR007631 RNA polymerase sigma factor 70, non-essential domain IF561_11370 IPR007630 RNA polymerase sigma-70 region 4 IF561_11370 IPR007624 RNA polymerase sigma-70 region 3 IF561_11370 IPR007627 RNA polymerase sigma-70 region 2 IF561_11370 IPR009042 RNA polymerase sigma-70 region 1.2 IF561_11370 IPR000943 RNA polymerase sigma-70 IF561_11370 IPR007127 RNA polymerase sigma factor 70, region 1.1 IF561_11380 IPR004872 Lipoprotein NlpA family IF561_11410 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC IF561_11410 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_11410 IPR003352 Phosphotransferase system, EIIC IF561_11410 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_11410 IPR013011 Phosphotransferase system, EIIB component, type 2 IF561_11410 IPR036095 PTS system IIB component-like superfamily IF561_11410 IPR002178 PTS EIIA type-2 domain IF561_11410 IPR016152 Phosphotransferase/anion transporter IF561_11410 IPR029503 Phosphotransferase system EIIB component, mannitol-specific IF561_11415 IPR013131 Mannitol dehydrogenase, N-terminal IF561_11415 IPR023027 Mannitol dehydrogenase, conserved site IF561_11415 IPR036291 NAD(P)-binding domain superfamily IF561_11415 IPR000669 Mannitol dehydrogenase IF561_11415 IPR023028 Mannitol-1-phosphate 5-dehydrogenase IF561_11415 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_11415 IPR013118 Mannitol dehydrogenase, C-terminal IF561_11415 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_11420 IPR007761 Mannitol repressor MtlR-like IF561_11420 IPR038026 MtlR-like superfamily IF561_11425 IPR036412 HAD-like superfamily IF561_11425 IPR006439 HAD hydrolase, subfamily IA IF561_11425 IPR041492 Haloacid dehalogenase-like hydrolase IF561_11425 IPR023214 HAD superfamily IF561_11425 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_11430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_11430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_11430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_11430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_11430 IPR006290 Heavy metal sensor kinase IF561_11430 IPR005467 Histidine kinase domain IF561_11430 IPR003594 Histidine kinase/HSP90-like ATPase IF561_11430 IPR003660 HAMP domain IF561_11435 IPR039420 Transcriptional regulatory protein WalR-like IF561_11435 IPR001789 Signal transduction response regulator, receiver domain IF561_11435 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11435 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_11435 IPR011006 CheY-like superfamily IF561_11435 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response IF561_11445 IPR017932 Glutamine amidotransferase type 2 domain IF561_11445 IPR035466 GlmS/AgaS, SIS domain 1 IF561_11445 IPR035490 GlmS/FrlB, SIS domain 2 IF561_11445 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising IF561_11445 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_11445 IPR001347 Sugar isomerase (SIS) IF561_11450 IPR036390 Winged helix DNA-binding domain superfamily IF561_11450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site IF561_11450 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11450 IPR001034 DeoR-type HTH domain IF561_11450 IPR037171 NagB/RpiA transferase-like IF561_11450 IPR014036 DeoR C-terminal sensor domain IF561_11455 IPR001697 Pyruvate kinase IF561_11455 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_11455 IPR040442 Pyruvate kinase-like domain superfamily IF561_11455 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_11455 IPR018209 Pyruvate kinase, active site IF561_11455 IPR015793 Pyruvate kinase, barrel IF561_11455 IPR015795 Pyruvate kinase, C-terminal IF561_11455 IPR036918 Pyruvate kinase, C-terminal domain superfamily IF561_11455 IPR015806 Pyruvate kinase, insert domain superfamily IF561_11465 IPR000160 GGDEF domain IF561_11465 IPR029787 Nucleotide cyclase IF561_11470 IPR019455 Acetolactate synthase, small subunit, C-terminal IF561_11470 IPR004789 Acetolactate synthase, small subunit IF561_11470 IPR002912 ACT domain IF561_11470 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal IF561_11470 IPR039557 AHAS, ACT domain IF561_11475 IPR029061 Thiamin diphosphate-binding fold IF561_11475 IPR012000 Thiamine pyrophosphate enzyme, central domain IF561_11475 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IF561_11475 IPR000399 TPP-binding enzyme, conserved site IF561_11475 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IF561_11475 IPR012846 Acetolactate synthase, large subunit, biosynthetic IF561_11475 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_11475 IPR039368 Acetolactate synthase large subunit, TPP binding domain IF561_11480 IPR042099 AMP-dependent synthetase-like superfamily IF561_11480 IPR000873 AMP-dependent synthetase/ligase IF561_11480 IPR020845 AMP-binding, conserved site IF561_11485 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11485 IPR036390 Winged helix DNA-binding domain superfamily IF561_11485 IPR005119 LysR, substrate-binding IF561_11485 IPR000847 Transcription regulator HTH, LysR IF561_11495 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IF561_11495 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IF561_11505 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain IF561_11505 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site IF561_11505 IPR013785 Aldolase-type TIM barrel IF561_11505 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily IF561_11505 IPR000891 Pyruvate carboxyltransferase IF561_11505 IPR005671 2-isopropylmalate synthase, bacterial-type IF561_11510 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IF561_11510 IPR004429 Isopropylmalate dehydrogenase IF561_11510 IPR024084 Isopropylmalate dehydrogenase-like domain IF561_11515 IPR004430 3-isopropylmalate dehydratase, large subunit IF561_11515 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IF561_11515 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IF561_11515 IPR018136 Aconitase family, 4Fe-4S cluster binding site IF561_11515 IPR036008 Aconitase, iron-sulfur domain IF561_11515 IPR033941 3-Isopropylmalate dehydratase, catalytic domain IF561_11520 IPR033940 3-isopropylmalate dehydratase, swivel domain IF561_11520 IPR004431 3-isopropylmalate dehydratase, small subunit IF561_11520 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IF561_11520 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IF561_11530 IPR023749 Co-chaperone DjlA IF561_11530 IPR007791 Co-chaperone DjlA, N-terminal IF561_11530 IPR001623 DnaJ domain IF561_11530 IPR036869 Chaperone J-domain superfamily IF561_11530 IPR029024 TerB-like IF561_11535 IPR020889 LPS-assembly protein LptD IF561_11535 IPR007543 LptD, C-terminal IF561_11535 IPR005653 Organic solvent tolerance-like, N-terminal IF561_11540 IPR023034 Peptidyl-prolyl isomerase SurA IF561_11540 IPR027304 Trigger factor/SurA domain superfamily IF561_11540 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IF561_11540 IPR015391 SurA N-terminal IF561_11545 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase IF561_11545 IPR005255 PdxA family IF561_11550 IPR011530 Ribosomal RNA adenine dimethylase IF561_11550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_11550 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IF561_11550 IPR023165 rRNA adenine dimethylase-like IF561_11550 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site IF561_11550 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal IF561_11555 IPR023065 Uncharacterised protein family ApaG IF561_11555 IPR036767 ApaG domain superfamily IF561_11555 IPR007474 ApaG domain IF561_11560 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) IF561_11560 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_11560 IPR029052 Metallo-dependent phosphatase-like IF561_11565 IPR012259 Dihydrofolate reductase IF561_11565 IPR024072 Dihydrofolate reductase-like domain superfamily IF561_11565 IPR001796 Dihydrofolate reductase domain IF561_11565 IPR017925 Dihydrofolate reductase conserved site IF561_11570 IPR020914 Uncharacterised protein family UPF0442 IF561_11570 IPR024528 Threonine/Serine exporter, ThrE IF561_11575 IPR010619 Putative threonine/serine exporter IF561_11580 IPR031167 OBG-type guanine nucleotide-binding (G) domain IF561_11580 IPR035101 GTP-binding protein, Obg-type IF561_11580 IPR006073 GTP binding domain IF561_11580 IPR036726 GTP1/OBG domain superfamily IF561_11580 IPR006169 GTP1/OBG domain IF561_11580 IPR006074 GTP1/OBG, conserved site IF561_11580 IPR014100 GTP-binding protein Obg/CgtA IF561_11580 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11585 IPR001684 Ribosomal protein L27 IF561_11585 IPR018261 Ribosomal protein L27, conserved site IF561_11590 IPR018258 Ribosomal protein L21, conserved site IF561_11590 IPR001787 Ribosomal protein L21 IF561_11590 IPR028909 Ribosomal protein L21-like IF561_11590 IPR036164 L21-like superfamily IF561_11595 IPR000092 Polyprenyl synthetase IF561_11595 IPR008949 Isoprenoid synthase domain superfamily IF561_11595 IPR033749 Polyprenyl synthetase, conserved site IF561_11605 IPR023958 Malate dehydrogenase, type 1, bacterial IF561_11605 IPR010097 Malate dehydrogenase, type 1 IF561_11605 IPR001252 Malate dehydrogenase, active site IF561_11605 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IF561_11605 IPR001236 Lactate/malate dehydrogenase, N-terminal IF561_11605 IPR022383 Lactate/malate dehydrogenase, C-terminal IF561_11605 IPR001557 L-lactate/malate dehydrogenase IF561_11605 IPR036291 NAD(P)-binding domain superfamily IF561_11610 IPR036390 Winged helix DNA-binding domain superfamily IF561_11610 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11610 IPR020900 Arginine repressor, DNA-binding domain IF561_11610 IPR036251 Arginine repressor, C-terminal domain superfamily IF561_11610 IPR020899 Arginine repressor, C-terminal IF561_11610 IPR001669 Arginine repressor IF561_11615 IPR011852 TRAP transporter solute receptor, TAXI family IF561_11630 IPR003593 AAA+ ATPase domain IF561_11630 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ IF561_11630 IPR003439 ABC transporter-like IF561_11630 IPR017871 ABC transporter, conserved site IF561_11630 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11635 IPR005947 Thiamine ABC transporter, permease protein IF561_11635 IPR035906 MetI-like superfamily IF561_11635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_11640 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter IF561_11640 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria IF561_11640 IPR006061 Solute-binding family 1, conserved site IF561_11645 IPR004507 Flavin prenyltransferase UbiX-like IF561_11645 IPR003382 Flavoprotein IF561_11645 IPR036551 Flavin prenyltransferase-like IF561_11650 IPR036565 Mur-like, catalytic domain superfamily IF561_11650 IPR013221 Mur ligase, central IF561_11650 IPR004101 Mur ligase, C-terminal IF561_11650 IPR000713 Mur ligase, N-terminal catalytic domain IF561_11650 IPR036615 Mur ligase, C-terminal domain superfamily IF561_11650 IPR005757 Murein peptide ligase IF561_11655 IPR020548 Fructose-1,6-bisphosphatase, active site IF561_11655 IPR028343 Fructose-1,6-bisphosphatase IF561_11655 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal IF561_11655 IPR000146 Fructose-1,6-bisphosphatase class 1 IF561_11660 IPR036649 Inorganic pyrophosphatase superfamily IF561_11660 IPR008162 Inorganic pyrophosphatase IF561_11670 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily IF561_11670 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like IF561_11670 IPR039126 Gamma-glutamylaminecyclotransferase IF561_11670 IPR013024 Gamma-glutamyl cyclotransferase-like IF561_11675 IPR007452 Translocation and assembly module TamB IF561_11680 IPR039910 Surface antigen D15-like IF561_11680 IPR035243 TamA, POTRA domain 1 IF561_11680 IPR000184 Bacterial surface antigen (D15) IF561_11685 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IF561_11685 IPR002569 Peptide methionine sulphoxide reductase MsrA IF561_11690 IPR009491 Protein of unknown function DUF1107 IF561_11695 IPR006513 Conserved hypothetical protein CHP01626, YtfJ IF561_11700 IPR019731 Protein of unknown function DUF2607 IF561_11710 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11710 IPR017871 ABC transporter, conserved site IF561_11710 IPR003439 ABC transporter-like IF561_11710 IPR003593 AAA+ ATPase domain IF561_11730 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11730 IPR002891 Adenylyl-sulfate kinase IF561_11735 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_11735 IPR004680 Citrate transporter-like domain IF561_11735 IPR031312 Sodium/sulphate symporter, conserved site IF561_11735 IPR006037 Regulator of K+ conductance, C-terminal IF561_11740 IPR000795 Transcription factor, GTP-binding domain IF561_11740 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain IF561_11740 IPR031157 Tr-type G domain, conserved site IF561_11740 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11740 IPR005225 Small GTP-binding protein domain IF561_11740 IPR011779 Sulphate adenylyltransferase, large subunit IF561_11740 IPR009000 Translation protein, beta-barrel domain superfamily IF561_11740 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IF561_11745 IPR002500 Phosphoadenosine phosphosulphate reductase IF561_11745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_11745 IPR011784 Sulphate adenylyltransferase, small subunit IF561_11750 IPR014777 Tetrapyrrole methylase, subdomain 1 IF561_11750 IPR035996 Tetrapyrrole methylase superfamily IF561_11750 IPR019478 Sirohaem synthase, dimerisation domain IF561_11750 IPR028281 Siroheme synthase, central domain IF561_11750 IPR037115 Sirohaem synthase, dimerisation domain superfamily IF561_11750 IPR036291 NAD(P)-binding domain superfamily IF561_11750 IPR006366 Uroporphyrin-III C-methyltransferase IF561_11750 IPR014776 Tetrapyrrole methylase, subdomain 2 IF561_11750 IPR000878 Tetrapyrrole methylase IF561_11750 IPR006367 Sirohaem synthase, N-terminal IF561_11750 IPR012409 Sirohaem synthase IF561_11750 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IF561_11755 IPR006179 5'-Nucleotidase/apyrase IF561_11755 IPR008334 5'-Nucleotidase, C-terminal IF561_11755 IPR006146 5'-Nucleotidase, conserved site IF561_11755 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_11755 IPR041827 CpdB, N-terminal metallophosphatase domain IF561_11755 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase IF561_11755 IPR029052 Metallo-dependent phosphatase-like IF561_11755 IPR036907 5'-Nucleotidase, C-terminal domain superfamily IF561_11765 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IF561_11765 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain IF561_11765 IPR011545 DEAD/DEAH box helicase domain IF561_11765 IPR028619 ATP-dependent RNA helicase DbpA IF561_11765 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_11765 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_11765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11765 IPR001650 Helicase, C-terminal IF561_11765 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_11770 IPR000182 GNAT domain IF561_11770 IPR016181 Acyl-CoA N-acyltransferase IF561_11780 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily IF561_11780 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_11780 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal IF561_11790 IPR000456 Ribosomal protein L17 IF561_11790 IPR036373 Ribosomal protein L17 superfamily IF561_11795 IPR036603 RNA polymerase, RBP11-like subunit IF561_11795 IPR011262 DNA-directed RNA polymerase, insert domain IF561_11795 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type IF561_11795 IPR036643 DNA-directed RNA polymerase, insert domain superfamily IF561_11795 IPR011773 DNA-directed RNA polymerase, alpha subunit IF561_11795 IPR011260 RNA polymerase, alpha subunit, C-terminal IF561_11800 IPR001912 Ribosomal protein S4/S9, N-terminal IF561_11800 IPR022801 Ribosomal protein S4/S9 IF561_11800 IPR002942 RNA-binding S4 domain IF561_11800 IPR036986 RNA-binding S4 domain superfamily IF561_11800 IPR018079 Ribosomal protein S4, conserved site IF561_11800 IPR005709 Ribosomal protein S4, bacterial-type IF561_11805 IPR036967 Ribosomal protein S11 superfamily IF561_11805 IPR019981 Ribosomal protein S11, bacterial-type IF561_11805 IPR018102 Ribosomal S11, conserved site IF561_11805 IPR001971 Ribosomal protein S11 IF561_11810 IPR018269 Ribosomal protein S13, conserved site IF561_11810 IPR019980 Ribosomal protein S13, bacterial-type IF561_11810 IPR010979 Ribosomal protein S13-like, H2TH IF561_11810 IPR001892 Ribosomal protein S13 IF561_11810 IPR027437 30s ribosomal protein S13, C-terminal IF561_11815 IPR035977 Ribosomal protein L36 superfamily IF561_11815 IPR000473 Ribosomal protein L36 IF561_11820 IPR002208 SecY/SEC61-alpha family IF561_11820 IPR030659 SecY conserved site IF561_11820 IPR023201 SecY domain superfamily IF561_11820 IPR026593 Protein translocase subunit SecY IF561_11825 IPR021131 Ribosomal protein L18e/L15P IF561_11825 IPR001196 Ribosomal protein L15, conserved site IF561_11825 IPR005749 Ribosomal protein L15, bacterial-type IF561_11825 IPR030878 Ribosomal protein L15 IF561_11825 IPR036227 Ribosomal L18e/L15P superfamily IF561_11830 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IF561_11830 IPR018038 Ribosomal protein L30, conserved site IF561_11830 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IF561_11830 IPR005996 Ribosomal protein L30, bacterial-type IF561_11835 IPR018192 Ribosomal protein S5, N-terminal, conserved site IF561_11835 IPR005712 Ribosomal protein S5, bacterial-type IF561_11835 IPR005324 Ribosomal protein S5, C-terminal IF561_11835 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_11835 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_11835 IPR013810 Ribosomal protein S5, N-terminal IF561_11835 IPR000851 Ribosomal protein S5 IF561_11840 IPR005484 Ribosomal protein L18 IF561_11840 IPR004389 Ribosomal protein L18, bacterial-type IF561_11845 IPR020040 Ribosomal protein L6, alpha-beta domain IF561_11845 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily IF561_11845 IPR019906 Ribosomal protein L6, bacterial-type IF561_11845 IPR002358 Ribosomal protein L6, conserved site IF561_11845 IPR000702 Ribosomal protein L6 IF561_11850 IPR000630 Ribosomal protein S8 IF561_11850 IPR035987 Ribosomal protein S8 superfamily IF561_11855 IPR001209 Ribosomal protein S14 IF561_11855 IPR023036 Ribosomal protein S14, bacterial/plastid IF561_11855 IPR018271 Ribosomal protein S14, conserved site IF561_11860 IPR020929 Ribosomal protein L5, conserved site IF561_11860 IPR031310 Ribosomal protein L5, N-terminal IF561_11860 IPR020930 Ribosomal protein L5, bacterial-type IF561_11860 IPR031309 Ribosomal protein L5, C-terminal IF561_11860 IPR022803 Ribosomal protein L5 domain superfamily IF561_11860 IPR002132 Ribosomal protein L5 IF561_11865 IPR005824 KOW IF561_11865 IPR041988 Ribosomal Protein L26/L24, KOW domain IF561_11865 IPR014722 Ribosomal protein L2, domain 2 IF561_11865 IPR003256 Ribosomal protein L24 IF561_11865 IPR005825 Ribosomal protein L24/L26, conserved site IF561_11865 IPR008991 Translation protein SH3-like domain superfamily IF561_11870 IPR036853 Ribosomal protein L14 superfamily IF561_11870 IPR000218 Ribosomal protein L14P IF561_11870 IPR005745 Ribosomal protein L14P, bacterial-type IF561_11870 IPR019972 Ribosomal protein L14P, conserved site IF561_11875 IPR019979 Ribosomal protein S17, conserved site IF561_11875 IPR012340 Nucleic acid-binding, OB-fold IF561_11875 IPR019984 30S ribosomal protein S17 IF561_11875 IPR000266 Ribosomal protein S17/S11 IF561_11880 IPR001854 Ribosomal protein L29/L35 IF561_11880 IPR018254 Ribosomal protein L29, conserved site IF561_11880 IPR036049 Ribosomal protein L29/L35 superfamily IF561_11885 IPR016180 Ribosomal protein L10e/L16 IF561_11885 IPR036920 Ribosomal protein L10e/L16 superfamily IF561_11885 IPR000114 Ribosomal protein L16 IF561_11885 IPR020798 Ribosomal protein L16, conserved site IF561_11890 IPR018280 Ribosomal protein S3, conserved site IF561_11890 IPR036419 Ribosomal protein S3, C-terminal domain superfamily IF561_11890 IPR005704 Ribosomal protein S3, bacterial-type IF561_11890 IPR001351 Ribosomal protein S3, C-terminal IF561_11890 IPR004044 K Homology domain, type 2 IF561_11890 IPR015946 K homology domain-like, alpha/beta IF561_11890 IPR004087 K Homology domain IF561_11890 IPR009019 K homology domain superfamily, prokaryotic type IF561_11895 IPR036394 Ribosomal protein L22/L17 superfamily IF561_11895 IPR001063 Ribosomal protein L22/L17 IF561_11895 IPR018260 Ribosomal protein L22/L17, conserved site IF561_11895 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type IF561_11900 IPR020934 Ribosomal protein S19 conserved site IF561_11900 IPR023575 Ribosomal protein S19, superfamily IF561_11900 IPR002222 Ribosomal protein S19/S15 IF561_11900 IPR005732 Ribosomal protein S19, bacterial-type IF561_11905 IPR012340 Nucleic acid-binding, OB-fold IF561_11905 IPR022666 Ribosomal Proteins L2, RNA binding domain IF561_11905 IPR014722 Ribosomal protein L2, domain 2 IF561_11905 IPR002171 Ribosomal protein L2 IF561_11905 IPR005880 Ribosomal protein L2, bacterial/organellar-type IF561_11905 IPR022669 Ribosomal protein L2, C-terminal IF561_11905 IPR022671 Ribosomal protein L2, conserved site IF561_11905 IPR014726 Ribosomal protein L2, domain 3 IF561_11905 IPR008991 Translation protein SH3-like domain superfamily IF561_11910 IPR012678 Ribosomal protein L23/L15e core domain superfamily IF561_11910 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IF561_11910 IPR001014 Ribosomal protein L23/L25, conserved site IF561_11910 IPR013025 Ribosomal protein L25/L23 IF561_11915 IPR002136 Ribosomal protein L4/L1e IF561_11915 IPR023574 Ribosomal protein L4 domain superfamily IF561_11915 IPR013005 50S ribosomal protein uL4 IF561_11920 IPR000597 Ribosomal protein L3 IF561_11920 IPR019927 Ribosomal protein L3, bacterial/organelle-type IF561_11920 IPR019926 Ribosomal protein L3, conserved site IF561_11920 IPR009000 Translation protein, beta-barrel domain superfamily IF561_11925 IPR036838 Ribosomal protein S10 domain superfamily IF561_11925 IPR027486 Ribosomal protein S10 domain IF561_11925 IPR018268 Ribosomal protein S10, conserved site IF561_11925 IPR001848 Ribosomal protein S10 IF561_11930 IPR034704 L28p-like IF561_11930 IPR002150 Ribosomal protein L31 IF561_11930 IPR027491 Ribosomal protein L31 type A IF561_11930 IPR042105 Ribosomal protein L31 superfamily IF561_11935 IPR041236 Primosomal protein N, C-terminal domain IF561_11935 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily IF561_11935 IPR041222 Primosomal protein N', 3' DNA-binding domain IF561_11935 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain IF561_11935 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11935 IPR001650 Helicase, C-terminal IF561_11935 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_11935 IPR011545 DEAD/DEAH box helicase domain IF561_11935 IPR005259 Primosomal protein N' IF561_11940 IPR000843 LacI-type HTH domain IF561_11940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_11940 IPR028082 Periplasmic binding protein-like I IF561_11950 IPR022281 ATP-dependent protease, HslV subunit IF561_11950 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_11950 IPR001353 Proteasome, subunit alpha/beta IF561_11950 IPR023333 Proteasome B-type subunit IF561_11955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_11955 IPR004491 Heat shock protein HslU IF561_11955 IPR003959 ATPase, AAA-type, core IF561_11955 IPR003593 AAA+ ATPase domain IF561_11955 IPR019489 Clp ATPase, C-terminal IF561_11960 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase IF561_11960 IPR000537 UbiA prenyltransferase family IF561_11960 IPR026046 UbiA prenyltransferase domain containing protein 1 IF561_11965 IPR010203 Regulator of ribonuclease activity A IF561_11965 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein IF561_11965 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily IF561_11965 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria IF561_11970 IPR009252 Cell division protein ZapB IF561_11975 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase IF561_11980 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_11980 IPR036390 Winged helix DNA-binding domain superfamily IF561_11980 IPR037171 NagB/RpiA transferase-like IF561_11980 IPR018356 Transcription regulator, HTH DeoR-type, conserved site IF561_11980 IPR014036 DeoR C-terminal sensor domain IF561_11980 IPR001034 DeoR-type HTH domain IF561_12000 IPR035990 Triosephosphate isomerase superfamily IF561_12000 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic IF561_12000 IPR000652 Triosephosphate isomerase IF561_12000 IPR020861 Triosephosphate isomerase, active site IF561_12000 IPR013785 Aldolase-type TIM barrel IF561_12010 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IF561_12010 IPR005835 Nucleotidyl transferase domain IF561_12010 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12015 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IF561_12015 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IF561_12015 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type IF561_12015 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IF561_12015 IPR017476 UDP-glucose/GDP-mannose dehydrogenase IF561_12015 IPR036291 NAD(P)-binding domain superfamily IF561_12015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_12015 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IF561_12020 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase IF561_12020 IPR000715 Glycosyl transferase, family 4 IF561_12025 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12025 IPR001173 Glycosyltransferase 2-like IF561_12060 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain IF561_12060 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB IF561_12060 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like IF561_12095 IPR010344 Exopolysaccharide biosynthesis protein YbjH IF561_12100 IPR001509 NAD-dependent epimerase/dehydratase IF561_12100 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase IF561_12100 IPR036291 NAD(P)-binding domain superfamily IF561_12105 IPR004960 Bacterial lipid A biosynthesis acyltransferase IF561_12105 IPR011921 Lipid A biosynthesis myristoyltransferase IF561_12110 IPR002201 Glycosyl transferase, family 9 IF561_12110 IPR011910 ADP-heptose--LPS heptosyltransferase 2 IF561_12115 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily IF561_12115 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal IF561_12115 IPR039901 3-deoxy-D-manno-octulosonic acid transferase IF561_12130 IPR001173 Glycosyltransferase 2-like IF561_12130 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12140 IPR005793 Formyl transferase, C-terminal IF561_12140 IPR002376 Formyl transferase, N-terminal IF561_12140 IPR036477 Formyl transferase, N-terminal domain superfamily IF561_12140 IPR011034 Formyl transferase-like, C-terminal domain superfamily IF561_12140 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain IF561_12140 IPR005794 Methionyl-tRNA formyltransferase IF561_12145 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_12145 IPR036291 NAD(P)-binding domain superfamily IF561_12145 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_12145 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_12155 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IF561_12155 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IF561_12155 IPR016039 Thiolase-like IF561_12155 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IF561_12165 IPR001242 Condensation domain IF561_12165 IPR001031 Thioesterase IF561_12165 IPR006162 Phosphopantetheine attachment site IF561_12165 IPR009081 Phosphopantetheine binding ACP domain IF561_12165 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IF561_12165 IPR042099 AMP-dependent synthetase-like superfamily IF561_12165 IPR000873 AMP-dependent synthetase/ligase IF561_12165 IPR020845 AMP-binding, conserved site IF561_12165 IPR025110 AMP-binding enzyme, C-terminal domain IF561_12165 IPR036736 ACP-like superfamily IF561_12165 IPR029058 Alpha/Beta hydrolase fold IF561_12165 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_12165 IPR010071 Amino acid adenylation domain IF561_12170 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase IF561_12170 IPR015424 Pyridoxal phosphate-dependent transferase IF561_12170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_12175 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form IF561_12175 IPR005835 Nucleotidyl transferase domain IF561_12175 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12180 IPR005888 dTDP-glucose 4,6-dehydratase IF561_12180 IPR016040 NAD(P)-binding domain IF561_12180 IPR036291 NAD(P)-binding domain superfamily IF561_12185 IPR000719 Protein kinase domain IF561_12185 IPR011009 Protein kinase-like domain superfamily IF561_12185 IPR022826 3-deoxy-D-manno-octulosonic acid kinase IF561_12190 IPR000829 DAGK family IF561_12190 IPR033718 Diacylglycerol kinase, prokaryotic IF561_12190 IPR036945 Diacylglycerol kinase (DAGK) superfamily IF561_12195 IPR002201 Glycosyl transferase, family 9 IF561_12200 IPR001173 Glycosyltransferase 2-like IF561_12200 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12205 IPR001173 Glycosyltransferase 2-like IF561_12205 IPR029044 Nucleotide-diphospho-sugar transferases IF561_12210 IPR006598 Glycosyl transferase CAP10 domain IF561_12215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_12215 IPR004821 Cytidyltransferase-like domain IF561_12215 IPR001980 Phosphopantetheine adenylyltransferase IF561_12220 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding IF561_12220 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site IF561_12220 IPR020629 Formamidopyrimidine-DNA glycosylase IF561_12220 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain IF561_12220 IPR035937 MutM-like, N-terminal IF561_12220 IPR010979 Ribosomal protein S13-like, H2TH IF561_12220 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type IF561_12220 IPR010663 Zinc finger, FPG/IleRS-type IF561_12230 IPR011332 Zinc-binding ribosomal protein IF561_12230 IPR038584 Ribosomal protein L33 superfamily IF561_12230 IPR018264 Ribosomal protein L33, conserved site IF561_12230 IPR001705 Ribosomal protein L33 IF561_12235 IPR034704 L28p-like IF561_12235 IPR037147 Ribosomal protein L28/L24 superfamily IF561_12235 IPR026569 Ribosomal protein L28/L24 IF561_12235 IPR001383 Ribosomal protein L28 IF561_12240 IPR037518 MPN domain IF561_12240 IPR025657 RadC-like JAB domain IF561_12240 IPR010994 RuvA domain 2-like IF561_12240 IPR001405 Uncharacterised protein family UPF0758 IF561_12240 IPR020891 Uncharacterised protein family UPF0758, conserved site IF561_12245 IPR004090 Chemotaxis methyl-accepting receptor IF561_12245 IPR003660 HAMP domain IF561_12245 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_12245 IPR033480 Single Cache domain 2 IF561_12245 IPR000727 Target SNARE coiled-coil homology domain IF561_12250 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC IF561_12250 IPR035929 CoaB-like superfamily IF561_12250 IPR003382 Flavoprotein IF561_12250 IPR036551 Flavin prenyltransferase-like IF561_12250 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal IF561_12255 IPR009057 Homeobox-like domain superfamily IF561_12255 IPR001647 DNA-binding HTH domain, TetR-type IF561_12255 IPR023769 Nucleoid occlusion factor SlmA IF561_12255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_12260 IPR004960 Bacterial lipid A biosynthesis acyltransferase IF561_12260 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase IF561_12265 IPR000836 Phosphoribosyltransferase domain IF561_12265 IPR029057 Phosphoribosyltransferase-like IF561_12265 IPR004467 Orotate phosphoribosyl transferase domain IF561_12265 IPR023031 Orotate phosphoribosyltransferase IF561_12270 IPR018336 Ribonuclease PH, conserved site IF561_12270 IPR002381 Ribonuclease PH, bacterial-type IF561_12270 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_12270 IPR027408 PNPase/RNase PH domain superfamily IF561_12270 IPR036345 Exoribonuclease, PH domain 2 superfamily IF561_12270 IPR015847 Exoribonuclease, phosphorolytic domain 2 IF561_12270 IPR001247 Exoribonuclease, phosphorolytic domain 1 IF561_12275 IPR013551 Domain of unknown function DUF1732 IF561_12275 IPR005229 Conserved hypothetical protein CHP00255 IF561_12275 IPR013527 YicC-like, N-terminal IF561_12285 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12285 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_12285 IPR017871 ABC transporter, conserved site IF561_12285 IPR003439 ABC transporter-like IF561_12285 IPR003593 AAA+ ATPase domain IF561_12290 IPR017871 ABC transporter, conserved site IF561_12290 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_12290 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12290 IPR003593 AAA+ ATPase domain IF561_12290 IPR003439 ABC transporter-like IF561_12295 IPR000914 Solute-binding protein family 5 domain IF561_12295 IPR023765 Solute-binding protein family 5, conserved site IF561_12295 IPR039424 Solute-binding protein family 5 IF561_12295 IPR030678 Peptide/nickel binding protein, MppA-type IF561_12300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_12300 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_12300 IPR035906 MetI-like superfamily IF561_12305 IPR035906 MetI-like superfamily IF561_12305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_12310 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_12310 IPR012910 TonB-dependent receptor, plug domain IF561_12310 IPR039426 Vitamin B12 transporter BtuB-like IF561_12310 IPR010101 TonB-dependent vitamin B12 transporter BtuB IF561_12310 IPR010916 TonB box, conserved site IF561_12310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_12310 IPR010917 TonB-dependent receptor, conserved site IF561_12310 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_12325 IPR002898 MotA/TolQ/ExbB proton channel IF561_12330 IPR003400 Biopolymer transport protein ExbD/TolR IF561_12345 IPR008144 Guanylate kinase-like domain IF561_12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12345 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IF561_12345 IPR017665 Guanylate kinase IF561_12345 IPR020590 Guanylate kinase, conserved site IF561_12350 IPR003716 DNA-directed RNA polymerase, omega subunit IF561_12350 IPR006110 RNA polymerase, subunit omega/K/RPB6 IF561_12350 IPR012293 RNA polymerase subunit, RPB6/omega IF561_12350 IPR036161 RPB6/omega subunit-like superfamily IF561_12355 IPR033655 RelA, TGS domain IF561_12355 IPR012676 TGS-like IF561_12355 IPR004095 TGS IF561_12355 IPR003607 HD/PDEase domain IF561_12355 IPR012675 Beta-grasp domain superfamily IF561_12355 IPR002912 ACT domain IF561_12355 IPR004811 RelA/SpoT family IF561_12355 IPR007685 RelA/SpoT IF561_12360 IPR029028 Alpha/beta knot methyltransferases IF561_12360 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal IF561_12360 IPR001537 tRNA/rRNA methyltransferase, SpoU type IF561_12360 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase IF561_12360 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_12365 IPR012340 Nucleic acid-binding, OB-fold IF561_12365 IPR033454 RecG, wedge domain IF561_12365 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12365 IPR001650 Helicase, C-terminal IF561_12365 IPR011545 DEAD/DEAH box helicase domain IF561_12365 IPR004609 ATP-dependent DNA helicase RecG IF561_12365 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_12370 IPR006042 Xanthine/uracil permease IF561_12370 IPR006043 Xanthine/uracil/vitamin C permease IF561_12375 IPR003660 HAMP domain IF561_12375 IPR003594 Histidine kinase/HSP90-like ATPase IF561_12375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_12375 IPR005467 Histidine kinase domain IF561_12375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_12375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_12375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_12380 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_12380 IPR039420 Transcriptional regulatory protein WalR-like IF561_12380 IPR011006 CheY-like superfamily IF561_12380 IPR016032 Signal transduction response regulator, C-terminal effector IF561_12380 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_12380 IPR001789 Signal transduction response regulator, receiver domain IF561_12390 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IF561_12390 IPR023459 Transcription elongation factor GreA/GreB family IF561_12390 IPR028624 Transcription elongation factor GreA/GreB IF561_12390 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IF561_12390 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IF561_12390 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IF561_12390 IPR006358 Transcription elongation factor GreB IF561_12390 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IF561_12400 IPR012340 Nucleic acid-binding, OB-fold IF561_12400 IPR037027 YqgF/RNase H-like domain superfamily IF561_12400 IPR041692 HHH domain 9 IF561_12400 IPR032639 Tex protein, YqgF-like domain IF561_12400 IPR018974 Tex-like protein, N-terminal IF561_12400 IPR023319 Tex-like protein, HTH domain superfamily IF561_12400 IPR006641 YqgF/RNase H-like domain IF561_12400 IPR003029 S1 domain IF561_12400 IPR022967 RNA-binding domain, S1 IF561_12400 IPR010994 RuvA domain 2-like IF561_12400 IPR012337 Ribonuclease H-like superfamily IF561_12400 IPR023323 Tex-like domain superfamily IF561_12410 IPR029058 Alpha/Beta hydrolase fold IF561_12410 IPR000073 Alpha/beta hydrolase fold-1 IF561_12410 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase IF561_12415 IPR005222 Competence protein ComF IF561_12415 IPR000836 Phosphoribosyltransferase domain IF561_12415 IPR029057 Phosphoribosyltransferase-like IF561_12420 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal IF561_12420 IPR035903 HesB-like domain superfamily IF561_12420 IPR000361 FeS cluster biogenesis IF561_12420 IPR034904 Fe-S cluster assembly domain superfamily IF561_12420 IPR017726 Fe/S biogenesis protein NfuA IF561_12425 IPR015797 NUDIX hydrolase-like domain superfamily IF561_12425 IPR020084 NUDIX hydrolase, conserved site IF561_12425 IPR000086 NUDIX hydrolase domain IF561_12430 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ IF561_12430 IPR020583 Inositol monophosphatase, metal-binding site IF561_12430 IPR000760 Inositol monophosphatase-like IF561_12430 IPR020550 Inositol monophosphatase, conserved site IF561_12435 IPR000645 Type II secretion system protein N, conserved site IF561_12435 IPR022792 Type II secretion system, protein N IF561_12440 IPR007690 Type II secretion system, protein M IF561_12440 IPR023229 Type II secretion system protein M, periplasmic domain superfamily IF561_12445 IPR007812 Type II secretion system protein L IF561_12445 IPR024230 GspL, cytoplasmic actin-ATPase-like domain IF561_12445 IPR025691 GspL periplasmic domain IF561_12450 IPR038072 GspK, central domain superfamily IF561_12450 IPR005628 General secretion pathway protein K IF561_12455 IPR012902 Prokaryotic N-terminal methylation site IF561_12455 IPR010055 Type II secretion system protein J IF561_12460 IPR012902 Prokaryotic N-terminal methylation site IF561_12460 IPR003413 Type II secretion system protein I domain IF561_12460 IPR010052 Type II secretion system protein I IF561_12465 IPR002416 Type II secretion system protein H IF561_12465 IPR012902 Prokaryotic N-terminal methylation site IF561_12465 IPR022346 General secretion pathway, GspH IF561_12470 IPR000983 Bacterial general secretion pathway protein G-type pilin IF561_12470 IPR010054 General secretion pathway protein G IF561_12470 IPR013545 Type II secretion system protein G IF561_12470 IPR012902 Prokaryotic N-terminal methylation site IF561_12475 IPR018076 Type II secretion system F domain IF561_12475 IPR001992 Type II secretion system conserved site IF561_12475 IPR011850 General secretion pathway protein F IF561_12475 IPR003004 GspF/PilC family IF561_12475 IPR042094 Type II secretion system F domain superfamily IF561_12480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12480 IPR003593 AAA+ ATPase domain IF561_12480 IPR013369 Type II secretion system GspE IF561_12480 IPR042181 Type II secretion system, protein E, N-terminal IF561_12480 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_12480 IPR001482 Type II/IV secretion system protein IF561_12485 IPR013356 Type II secretion system GspD IF561_12485 IPR004845 Type II secretion system GspD, conserved site IF561_12485 IPR005644 NolW-like IF561_12485 IPR001775 GspD/PilQ family IF561_12485 IPR038591 NolW-like superfamily IF561_12485 IPR004846 Type II/III secretion system IF561_12490 IPR036034 PDZ superfamily IF561_12490 IPR024961 Type II secretion system protein C, N-terminal IF561_12490 IPR001639 Type II secretion system protein C IF561_12495 IPR025708 Heat shock protein 15 IF561_12495 IPR002942 RNA-binding S4 domain IF561_12495 IPR036986 RNA-binding S4 domain superfamily IF561_12500 IPR000397 Heat shock protein Hsp33 IF561_12500 IPR016153 Heat shock protein Hsp33, N-terminal IF561_12500 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily IF561_12500 IPR016154 Heat shock protein Hsp33, C-terminal IF561_12505 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal IF561_12505 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising IF561_12505 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal IF561_12505 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site IF561_12515 IPR012660 Thioesterase, putative IF561_12515 IPR029069 HotDog domain superfamily IF561_12515 IPR000182 GNAT domain IF561_12515 IPR016181 Acyl-CoA N-acyltransferase IF561_12520 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily IF561_12520 IPR003732 D-aminoacyl-tRNA deacylase DTD IF561_12525 IPR023679 Uncharacterised protein family UPF0761, bacterial IF561_12525 IPR017039 Virulence factor BrkB IF561_12540 IPR031157 Tr-type G domain, conserved site IF561_12540 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_12540 IPR000640 Elongation factor EFG, domain V-like IF561_12540 IPR035647 EF-G domain III/V-like IF561_12540 IPR035651 BipA, domain V IF561_12540 IPR005225 Small GTP-binding protein domain IF561_12540 IPR000795 Transcription factor, GTP-binding domain IF561_12540 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12540 IPR042116 GTP-binding protein TypA/BipA, C-terminal IF561_12540 IPR006298 GTP-binding protein TypA IF561_12540 IPR009000 Translation protein, beta-barrel domain superfamily IF561_12545 IPR027302 Glutamine synthetase, N-terminal conserved site IF561_12545 IPR001637 Glutamine synthetase class-I, adenylation site IF561_12545 IPR027303 Glutamine synthetase, glycine-rich site IF561_12545 IPR004809 Glutamine synthetase type I IF561_12545 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IF561_12545 IPR036651 Glutamine synthetase, N-terminal domain superfamily IF561_12545 IPR008147 Glutamine synthetase, beta-Grasp domain IF561_12545 IPR008146 Glutamine synthetase, catalytic domain IF561_12555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_12555 IPR005467 Histidine kinase domain IF561_12555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_12555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_12555 IPR000014 PAS domain IF561_12555 IPR013767 PAS fold IF561_12555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_12555 IPR003594 Histidine kinase/HSP90-like ATPase IF561_12555 IPR035965 PAS domain superfamily IF561_12560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_12560 IPR010114 DNA-binding transcriptional regulator NtrC IF561_12560 IPR025944 Sigma-54 interaction domain, conserved site IF561_12560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_12560 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_12560 IPR001789 Signal transduction response regulator, receiver domain IF561_12560 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12560 IPR002197 DNA binding HTH domain, Fis-type IF561_12560 IPR009057 Homeobox-like domain superfamily IF561_12560 IPR003593 AAA+ ATPase domain IF561_12560 IPR011006 CheY-like superfamily IF561_12565 IPR000160 GGDEF domain IF561_12565 IPR035919 EAL domain superfamily IF561_12565 IPR001633 EAL domain IF561_12565 IPR029787 Nucleotide cyclase IF561_12565 IPR005330 MHYT domain IF561_12570 IPR032466 Metal-dependent hydrolase IF561_12570 IPR006330 Adenosine/adenine deaminase IF561_12570 IPR028893 Adenosine deaminase IF561_12570 IPR001365 Adenosine/AMP deaminase domain IF561_12575 IPR006638 Elp3/MiaB/NifB IF561_12575 IPR034505 Anaerobic coproporphyrinogen-III oxidase IF561_12575 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN IF561_12575 IPR023404 Radical SAM, alpha/beta horseshoe IF561_12575 IPR007197 Radical SAM IF561_12575 IPR010723 HemN, C-terminal IF561_12580 IPR019617 Domain of unknown function DUF2489 IF561_12585 IPR007336 Der GTPase activator IF561_12595 IPR024167 Cytochrome c4-like IF561_12595 IPR036909 Cytochrome c-like domain superfamily IF561_12595 IPR009056 Cytochrome c-like domain IF561_12600 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC IF561_12600 IPR030393 EngB-type guanine nucleotide-binding (G) domain IF561_12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12600 IPR006073 GTP binding domain IF561_12605 IPR002562 3'-5' exonuclease domain IF561_12605 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IF561_12605 IPR020045 DNA polymerase I-like, H3TH domain IF561_12605 IPR019760 DNA-directed DNA polymerase, family A, conserved site IF561_12605 IPR036397 Ribonuclease H superfamily IF561_12605 IPR012337 Ribonuclease H-like superfamily IF561_12605 IPR002421 5'-3' exonuclease, N-terminal IF561_12605 IPR029060 PIN-like domain superfamily IF561_12605 IPR008918 Helix-hairpin-helix motif, class 2 IF561_12605 IPR002298 DNA polymerase A IF561_12605 IPR018320 DNA polymerase 1 IF561_12605 IPR001098 DNA-directed DNA polymerase, family A, palm domain IF561_12605 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IF561_12620 IPR013785 Aldolase-type TIM barrel IF561_12620 IPR030656 Delta-aminolevulinic acid dehydratase, active site IF561_12620 IPR001731 Delta-aminolevulinic acid dehydratase IF561_12625 IPR032466 Metal-dependent hydrolase IF561_12625 IPR015991 Uncharacterised hydrolase TatD-type IF561_12625 IPR018228 Deoxyribonuclease, TatD-related, conserved site IF561_12625 IPR001130 TatD family IF561_12630 IPR002033 Sec-independent periplasmic protein translocase TatC IF561_12630 IPR019820 Sec-independent periplasmic protein translocase, conserved site IF561_12635 IPR018448 Twin-arginine translocation protein TatB IF561_12635 IPR003369 Sec-independent protein translocase protein TatA/B/E IF561_12640 IPR006312 Sec-independent protein translocase protein TatA/E IF561_12640 IPR003369 Sec-independent protein translocase protein TatA/B/E IF561_12645 IPR011009 Protein kinase-like domain superfamily IF561_12645 IPR004147 UbiB domain IF561_12645 IPR010232 Probable protein kinase UbiB IF561_12650 IPR003033 SCP2 sterol-binding domain IF561_12650 IPR036527 SCP2 sterol-binding domain superfamily IF561_12650 IPR038989 Ubiquinone biosynthesis protein UbiJ IF561_12655 IPR004033 UbiE/COQ5 methyltransferase IF561_12655 IPR023576 UbiE/COQ5 methyltransferase, conserved site IF561_12655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_12660 IPR003798 DNA recombination RmuC IF561_12670 IPR029787 Nucleotide cyclase IF561_12670 IPR001633 EAL domain IF561_12670 IPR035919 EAL domain superfamily IF561_12670 IPR000160 GGDEF domain IF561_12670 IPR005330 MHYT domain IF561_12675 IPR002549 Transmembrane protein TqsA-like IF561_12725 IPR007055 BON domain IF561_12725 IPR014004 Transport-associated and nodulation domain, bacteria IF561_12730 IPR025944 Sigma-54 interaction domain, conserved site IF561_12730 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_12730 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_12730 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12730 IPR002197 DNA binding HTH domain, Fis-type IF561_12730 IPR003018 GAF domain IF561_12730 IPR029016 GAF-like domain superfamily IF561_12730 IPR003593 AAA+ ATPase domain IF561_12730 IPR009057 Homeobox-like domain superfamily IF561_12735 IPR023166 HI0933-like insert domain superfamily IF561_12735 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like IF561_12735 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_12740 IPR019598 Universal stress protein B IF561_12750 IPR006016 UspA IF561_12750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_12750 IPR006015 Universal stress protein A family IF561_12755 IPR004779 Carboxylate/Amino Acid/Amine Transporter IF561_12755 IPR000620 EamA domain IF561_12765 IPR007536 Ribosomal RNA small subunit methyltransferase J IF561_12765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_12770 IPR001633 EAL domain IF561_12770 IPR035919 EAL domain superfamily IF561_12770 IPR000160 GGDEF domain IF561_12770 IPR029787 Nucleotide cyclase IF561_12770 IPR000014 PAS domain IF561_12770 IPR035965 PAS domain superfamily IF561_12770 IPR013656 PAS fold-4 IF561_12775 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_12775 IPR036390 Winged helix DNA-binding domain superfamily IF561_12775 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_12775 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_12775 IPR019888 Transcription regulator AsnC-type IF561_12775 IPR011008 Dimeric alpha-beta barrel IF561_12775 IPR000485 AsnC-type HTH domain IF561_12775 IPR011991 ArsR-like helix-turn-helix domain IF561_12780 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 IF561_12780 IPR001567 Peptidase M3A/M3B catalytic domain IF561_12785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_12785 IPR007473 Ribosomal RNA large subunit methyltransferase J IF561_12785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_12790 IPR006322 Glutathione reductase, eukaryote/bacterial IF561_12790 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IF561_12790 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IF561_12790 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IF561_12790 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IF561_12790 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_12790 IPR023753 FAD/NAD(P)-binding domain IF561_12860 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain IF561_12860 IPR005119 LysR, substrate-binding IF561_12860 IPR000847 Transcription regulator HTH, LysR IF561_12860 IPR036390 Winged helix DNA-binding domain superfamily IF561_12860 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_12865 IPR010943 Xanthosine phosphorylase IF561_12865 IPR018099 Purine phosphorylase, family 2, conserved site IF561_12865 IPR011268 Purine nucleoside phosphorylase IF561_12865 IPR035994 Nucleoside phosphorylase superfamily IF561_12865 IPR000845 Nucleoside phosphorylase domain IF561_12870 IPR013785 Aldolase-type TIM barrel IF561_12870 IPR031337 KDPG/KHG aldolase, active site 1 IF561_12870 IPR000887 KDPG/KHG aldolase IF561_12870 IPR031338 KDPG/KHG aldolase, active site 2 IF561_12875 IPR003474 Gluconate transporter IF561_12880 IPR006001 Carbohydrate kinase, thermoresistant glucokinase IF561_12880 IPR031322 Shikimate kinase/gluconokinase IF561_12880 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12885 IPR037237 IlvD/EDD, N-terminal domain IF561_12885 IPR042096 Dihydroxy-acid dehydratase, C-terminal IF561_12885 IPR004786 6-phosphogluconate dehydratase IF561_12885 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site IF561_12885 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase IF561_12890 IPR000390 Small multidrug resistance protein family IF561_12890 IPR023737 Spermidine export protein MdtI IF561_12895 IPR000390 Small multidrug resistance protein family IF561_12895 IPR023740 Spermidine export protein MdtJ IF561_12900 IPR036390 Winged helix DNA-binding domain superfamily IF561_12900 IPR005119 LysR, substrate-binding IF561_12900 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_12900 IPR000847 Transcription regulator HTH, LysR IF561_12905 IPR001761 Periplasmic binding protein/LacI sugar binding domain IF561_12905 IPR000843 LacI-type HTH domain IF561_12905 IPR028082 Periplasmic binding protein-like I IF561_12905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_12910 IPR008271 Serine/threonine-protein kinase, active site IF561_12910 IPR017441 Protein kinase, ATP binding site IF561_12910 IPR000719 Protein kinase domain IF561_12910 IPR011009 Protein kinase-like domain superfamily IF561_12940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_12940 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IF561_12940 IPR035906 MetI-like superfamily IF561_12945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_12945 IPR035906 MetI-like superfamily IF561_12950 IPR030678 Peptide/nickel binding protein, MppA-type IF561_12950 IPR039424 Solute-binding protein family 5 IF561_12950 IPR000914 Solute-binding protein family 5 domain IF561_12950 IPR023765 Solute-binding protein family 5, conserved site IF561_12955 IPR003593 AAA+ ATPase domain IF561_12955 IPR003439 ABC transporter-like IF561_12955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12955 IPR017871 ABC transporter, conserved site IF561_12955 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_12960 IPR023214 HAD superfamily IF561_12960 IPR041492 Haloacid dehalogenase-like hydrolase IF561_12960 IPR006549 HAD-superfamily hydrolase,subfamily IIIA IF561_12960 IPR006439 HAD hydrolase, subfamily IA IF561_12960 IPR036412 HAD-like superfamily IF561_12960 IPR023733 Pyrophosphatase PpaX IF561_12960 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_12990 IPR036909 Cytochrome c-like domain superfamily IF561_12990 IPR002323 Cytochrome c, class IE IF561_12990 IPR009056 Cytochrome c-like domain IF561_12995 IPR013986 DExx box DNA helicase domain superfamily IF561_12995 IPR014017 UvrD-like DNA helicase, C-terminal IF561_12995 IPR000212 DNA helicase, UvrD/REP type IF561_12995 IPR005752 ATP-dependent DNA helicase Rep IF561_12995 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_12995 IPR014016 UvrD-like helicase, ATP-binding domain IF561_12995 IPR034739 UvrD/AddA helicase, N-terminal IF561_13000 IPR009057 Homeobox-like domain superfamily IF561_13000 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_13000 IPR001647 DNA-binding HTH domain, TetR-type IF561_13000 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_13000 IPR032551 HTH-type transcriptional repressor, C-terminal IF561_13005 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_13005 IPR006143 RND efflux pump, membrane fusion protein IF561_13010 IPR001036 Acriflavin resistance protein IF561_13010 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_13015 IPR007475 Ubiquinone biosynthesis accessory factor UbiK IF561_13020 IPR036291 NAD(P)-binding domain superfamily IF561_13020 IPR013116 Ketol-acid reductoisomerase, N-terminal IF561_13020 IPR000506 Ketol-acid reductoisomerase, C-terminal IF561_13020 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_13020 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_13020 IPR013023 Ketol-acid reductoisomerase IF561_13025 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13025 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain IF561_13025 IPR005119 LysR, substrate-binding IF561_13025 IPR000847 Transcription regulator HTH, LysR IF561_13025 IPR036390 Winged helix DNA-binding domain superfamily IF561_13060 IPR011004 Trimeric LpxA-like superfamily IF561_13060 IPR001451 Hexapeptide repeat IF561_13065 IPR009962 Protein of unknown function DUF1488 IF561_13065 IPR036692 Shew3726-like superfamily IF561_13070 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IF561_13070 IPR036291 NAD(P)-binding domain superfamily IF561_13070 IPR041121 SDH, C-terminal IF561_13070 IPR011342 Shikimate dehydrogenase IF561_13070 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal IF561_13070 IPR022893 Shikimate dehydrogenase family IF561_13075 IPR018375 Coproporphyrinogen III oxidase, conserved site IF561_13075 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily IF561_13075 IPR001260 Coproporphyrinogen III oxidase, aerobic IF561_13080 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IF561_13080 IPR023535 Threonylcarbamoyl-AMP synthase IF561_13080 IPR006070 YrdC-like domain IF561_13085 IPR035893 PurE domain superfamily IF561_13085 IPR000031 PurE domain IF561_13085 IPR033747 Class I PurE IF561_13085 IPR024694 PurE, prokaryotic type IF561_13090 IPR011054 Rudiment single hybrid motif IF561_13090 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain IF561_13090 IPR016185 Pre-ATP-grasp domain superfamily IF561_13090 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit IF561_13090 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IF561_13090 IPR013815 ATP-grasp fold, subdomain 1 IF561_13090 IPR011761 ATP-grasp fold IF561_13095 IPR000380 DNA topoisomerase, type IA IF561_13095 IPR013498 DNA topoisomerase, type IA, zn finger IF561_13100 IPR007456 Smg IF561_13105 IPR003488 DNA recombination-mediator protein A IF561_13105 IPR041614 DprA, winged helix domain IF561_13105 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13115 IPR023635 Peptide deformylase IF561_13115 IPR036821 Peptide deformylase superfamily IF561_13120 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain IF561_13120 IPR001555 Phosphoribosylglycinamide formyltransferase, active site IF561_13120 IPR011034 Formyl transferase-like, C-terminal domain superfamily IF561_13120 IPR002376 Formyl transferase, N-terminal IF561_13120 IPR037022 Formyl transferase, C-terminal domain superfamily IF561_13120 IPR036477 Formyl transferase, N-terminal domain superfamily IF561_13120 IPR005794 Methionyl-tRNA formyltransferase IF561_13120 IPR005793 Formyl transferase, C-terminal IF561_13125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_13125 IPR004573 rRNA small subunit methyltransferase B IF561_13125 IPR006027 NusB/RsmB/TIM44 IF561_13125 IPR035926 NusB-like superfamily IF561_13125 IPR023267 RNA (C5-cytosine) methyltransferase IF561_13125 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IF561_13125 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IF561_13130 IPR006036 Potassium uptake protein TrkA IF561_13130 IPR036291 NAD(P)-binding domain superfamily IF561_13130 IPR006037 Regulator of K+ conductance, C-terminal IF561_13130 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_13130 IPR003148 Regulator of K+ conductance, N-terminal IF561_13135 IPR004772 TrkH potassium transport family IF561_13135 IPR003445 Cation transporter IF561_13145 IPR005744 Hly-III IF561_13145 IPR004254 AdipoR/Haemolysin-III-related IF561_13150 IPR009776 Sporulation stage 0, protein M IF561_13150 IPR014756 Immunoglobulin E-set IF561_13150 IPR014752 Arrestin, C-terminal IF561_13160 IPR009383 Protein of unknown function DUF1040 IF561_13160 IPR038134 YihD-like superfamily IF561_13165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_13165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_13165 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG IF561_13165 IPR032879 FixG, C-terminal immunoglobulin-like domain IF561_13165 IPR013783 Immunoglobulin-like fold IF561_13170 IPR002575 Aminoglycoside phosphotransferase IF561_13170 IPR011009 Protein kinase-like domain superfamily IF561_13170 IPR032882 SrkA/RdoA protein kinase IF561_13175 IPR013766 Thioredoxin domain IF561_13175 IPR036249 Thioredoxin-like superfamily IF561_13175 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL IF561_13175 IPR001853 DSBA-like thioredoxin domain IF561_13180 IPR002123 Phospholipid/glycerol acyltransferase IF561_13215 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13225 IPR011129 Cold shock domain IF561_13225 IPR019844 Cold-shock (CSD) domain IF561_13225 IPR012340 Nucleic acid-binding, OB-fold IF561_13225 IPR002059 Cold-shock protein, DNA-binding IF561_13225 IPR012156 Cold shock, CspA IF561_13250 IPR012340 Nucleic acid-binding, OB-fold IF561_13250 IPR012156 Cold shock, CspA IF561_13250 IPR019844 Cold-shock (CSD) domain IF561_13250 IPR011129 Cold shock domain IF561_13250 IPR002059 Cold-shock protein, DNA-binding IF561_13260 IPR001972 Stomatin family IF561_13260 IPR001107 Band 7 domain IF561_13260 IPR036013 Band 7/SPFH domain superfamily IF561_13260 IPR010201 HflK IF561_13260 IPR020980 Menbrane protein HflK, N-terminal IF561_13270 IPR004670 Na+/H+ antiporter NhaA IF561_13270 IPR023171 Na/H antiporter domain superfamily IF561_13275 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IF561_13275 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IF561_13275 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IF561_13275 IPR036008 Aconitase, iron-sulfur domain IF561_13275 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IF561_13275 IPR018136 Aconitase family, 4Fe-4S cluster binding site IF561_13275 IPR006249 Aconitase/Iron-responsive element-binding protein 2 IF561_13280 IPR002059 Cold-shock protein, DNA-binding IF561_13280 IPR019844 Cold-shock (CSD) domain IF561_13280 IPR011129 Cold shock domain IF561_13280 IPR012340 Nucleic acid-binding, OB-fold IF561_13280 IPR012156 Cold shock, CspA IF561_13315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_13315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13315 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_13315 IPR025158 Mg chelatase-related protein, C-terminal domain IF561_13315 IPR003593 AAA+ ATPase domain IF561_13315 IPR000523 Magnesium chelatase ChlI domain IF561_13315 IPR001208 MCM domain IF561_13315 IPR004482 Mg chelatase-related protein IF561_13320 IPR012846 Acetolactate synthase, large subunit, biosynthetic IF561_13320 IPR039368 Acetolactate synthase large subunit, TPP binding domain IF561_13320 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_13320 IPR029061 Thiamin diphosphate-binding fold IF561_13320 IPR012000 Thiamine pyrophosphate enzyme, central domain IF561_13320 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IF561_13320 IPR000399 TPP-binding enzyme, conserved site IF561_13320 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IF561_13325 IPR002912 ACT domain IF561_13330 IPR033939 Branched-chain aminotransferase IF561_13330 IPR036038 Aminotransferase-like, PLP-dependent enzymes IF561_13330 IPR018300 Aminotransferase, class IV, conserved site IF561_13330 IPR001544 Aminotransferase class IV IF561_13330 IPR005785 Branched-chain amino acid aminotransferase I IF561_13335 IPR042096 Dihydroxy-acid dehydratase, C-terminal IF561_13335 IPR004404 Dihydroxy-acid dehydratase IF561_13335 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase IF561_13335 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site IF561_13335 IPR037237 IlvD/EDD, N-terminal domain IF561_13340 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_13340 IPR005787 Threonine dehydratase, biosynthetic IF561_13340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IF561_13340 IPR001721 Threonine dehydratase, ACT-like domain IF561_13340 IPR038110 Threonine dehydratase, ACT-like domain superfamily IF561_13340 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_13345 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13345 IPR036390 Winged helix DNA-binding domain superfamily IF561_13345 IPR005119 LysR, substrate-binding IF561_13345 IPR000847 Transcription regulator HTH, LysR IF561_13350 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IF561_13350 IPR011701 Major facilitator superfamily IF561_13350 IPR020846 Major facilitator superfamily domain IF561_13350 IPR036259 MFS transporter superfamily IF561_13355 IPR018313 Solute-binding protein family 3, conserved site IF561_13355 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_13360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_13360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_13360 IPR035906 MetI-like superfamily IF561_13365 IPR029044 Nucleotide-diphospho-sugar transferases IF561_13365 IPR011004 Trimeric LpxA-like superfamily IF561_13365 IPR018357 Hexapeptide transferase, conserved site IF561_13365 IPR001451 Hexapeptide repeat IF561_13365 IPR025877 MobA-like NTP transferase IF561_13365 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase IF561_13365 IPR038009 GlmU, C-terminal LbH domain IF561_13370 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit IF561_13370 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal IF561_13370 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily IF561_13370 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain IF561_13370 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal IF561_13375 IPR003593 AAA+ ATPase domain IF561_13375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13375 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_13375 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal IF561_13375 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IF561_13375 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_13375 IPR005722 ATP synthase, F1 complex, beta subunit IF561_13375 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IF561_13380 IPR000131 ATP synthase, F1 complex, gamma subunit IF561_13380 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site IF561_13380 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily IF561_13385 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IF561_13385 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13385 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_13385 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IF561_13385 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_13385 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily IF561_13385 IPR005294 ATP synthase, F1 complex, alpha subunit IF561_13385 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain IF561_13385 IPR000793 ATP synthase, alpha subunit, C-terminal IF561_13385 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IF561_13390 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily IF561_13390 IPR020781 ATPase, OSCP/delta subunit, conserved site IF561_13390 IPR000711 ATPase, OSCP/delta subunit IF561_13395 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily IF561_13395 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IF561_13395 IPR005864 ATP synthase, F0 complex, subunit b, bacterial IF561_13400 IPR000454 ATP synthase, F0 complex, subunit C IF561_13400 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site IF561_13400 IPR038662 F1F0 ATP synthase subunit C superfamily IF561_13400 IPR002379 V-ATPase proteolipid subunit C-like domain IF561_13400 IPR035921 F/V-ATP synthase subunit C superfamily IF561_13400 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast IF561_13405 IPR000568 ATP synthase, F0 complex, subunit A IF561_13405 IPR035908 ATP synthase, F0 complex, subunit A superfamily IF561_13405 IPR023011 ATP synthase, F0 complex, subunit A, active site IF561_13410 IPR005598 ATP synthase protein I IF561_13415 IPR041468 ParB/Spo0J, HTH domain IF561_13415 IPR004437 ParB/RepB/Spo0J partition protein IF561_13415 IPR003115 ParB/Sulfiredoxin IF561_13415 IPR036086 ParB/Sulfiredoxin superfamily IF561_13420 IPR025669 AAA domain IF561_13420 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13425 IPR003682 rRNA small subunit methyltransferase G IF561_13425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_13430 IPR020595 MnmG-related, conserved site IF561_13430 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related IF561_13430 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG IF561_13430 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_13430 IPR026904 GidA associated domain 3 IF561_13435 IPR008254 Flavodoxin/nitric oxide synthase IF561_13435 IPR029039 Flavoprotein-like superfamily IF561_13440 IPR005225 Small GTP-binding protein domain IF561_13440 IPR027368 tRNA modification GTPase MnmE domain 2 IF561_13440 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13440 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IF561_13440 IPR025867 MnmE, helical domain IF561_13440 IPR006073 GTP binding domain IF561_13440 IPR004520 tRNA modification GTPase MnmE IF561_13440 IPR018948 GTP-binding protein TrmE, N-terminal IF561_13440 IPR031168 TrmE-type guanine nucleotide-binding domain IF561_13445 IPR038221 YidC, periplasmic domain superfamily IF561_13445 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 IF561_13445 IPR028053 Membrane insertase YidC, N-terminal IF561_13445 IPR038210 Membrane insertase YidC, periplasmic domain IF561_13445 IPR019998 Membrane insertase YidC IF561_13445 IPR028055 Membrane insertase YidC/Oxa1, C-terminal IF561_13450 IPR002696 Putative membrane protein insertion efficiency factor IF561_13455 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_13455 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_13455 IPR000100 Ribonuclease P IF561_13455 IPR020539 Ribonuclease P, conserved site IF561_13460 IPR020939 Ribosomal protein L34, conserved site IF561_13460 IPR000271 Ribosomal protein L34 IF561_13465 IPR003439 ABC transporter-like IF561_13465 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IF561_13465 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13465 IPR017871 ABC transporter, conserved site IF561_13465 IPR003593 AAA+ ATPase domain IF561_13470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_13470 IPR035906 MetI-like superfamily IF561_13470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_13475 IPR001320 Ionotropic glutamate receptor IF561_13475 IPR018313 Solute-binding protein family 3, conserved site IF561_13475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_13480 IPR010921 Trp repressor/replication initiator IF561_13480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13480 IPR038454 DnaA, N-terminal domain superfamily IF561_13480 IPR024633 DnaA N-terminal domain IF561_13480 IPR013317 Chromosomal replication initiator protein DnaA IF561_13480 IPR013159 Chromosomal replication initiator, DnaA C-terminal IF561_13480 IPR020591 Chromosomal replication control, initiator DnaA-like IF561_13480 IPR001957 Chromosomal replication control, initiator DnaA IF561_13480 IPR003593 AAA+ ATPase domain IF561_13480 IPR018312 Chromosomal replication control, initiator DnaA, conserved site IF561_13485 IPR001001 DNA polymerase III, beta sliding clamp IF561_13485 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal IF561_13485 IPR022637 DNA polymerase III, beta sliding clamp, central IF561_13485 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal IF561_13490 IPR003395 RecF/RecN/SMC, N-terminal IF561_13490 IPR042174 DNA-binding RecF, domain 2 IF561_13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13490 IPR001238 DNA-binding, RecF IF561_13490 IPR018078 DNA-binding, RecF, conserved site IF561_13495 IPR034160 DNA gyrase subunit B, TOPRIM domain IF561_13495 IPR006171 TOPRIM domain IF561_13495 IPR018522 DNA topoisomerase, type IIA, conserved site IF561_13495 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IF561_13495 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IF561_13495 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IF561_13495 IPR001241 DNA topoisomerase, type IIA IF561_13495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_13495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_13495 IPR003594 Histidine kinase/HSP90-like ATPase IF561_13495 IPR041423 DNA gyrase subunit B insert domain IF561_13495 IPR011557 DNA gyrase, subunit B IF561_13495 IPR002288 DNA gyrase B subunit, C-terminal IF561_13495 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_13505 IPR008978 HSP20-like chaperone IF561_13505 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain IF561_13505 IPR023728 Small heat shock protein IbpA IF561_13505 IPR002068 Alpha crystallin/Hsp20 domain IF561_13510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_13510 IPR015424 Pyridoxal phosphate-dependent transferase IF561_13510 IPR004839 Aminotransferase, class I/classII IF561_13515 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_13515 IPR014635 Alpha-amylase, MalS type IF561_13515 IPR017853 Glycoside hydrolase superfamily IF561_13520 IPR006194 Glycine-tRNA synthetase, heterodimeric IF561_13520 IPR015944 Glycine-tRNA ligase, beta subunit IF561_13520 IPR008909 DALR anticodon binding IF561_13525 IPR006194 Glycine-tRNA synthetase, heterodimeric IF561_13525 IPR002310 Glycine-tRNA ligase, alpha subunit IF561_13530 IPR001727 Gdt1 family IF561_13540 IPR022931 Sulfur carrier protein TusA IF561_13540 IPR001455 TusA-like domain IF561_13540 IPR036868 TusA-like domain superfamily IF561_13550 IPR005119 LysR, substrate-binding IF561_13550 IPR000847 Transcription regulator HTH, LysR IF561_13550 IPR023746 Transcription regulator HTH, YidZ IF561_13550 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13550 IPR036390 Winged helix DNA-binding domain superfamily IF561_13550 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain IF561_13555 IPR036291 NAD(P)-binding domain superfamily IF561_13555 IPR011032 GroES-like superfamily IF561_13555 IPR013154 Alcohol dehydrogenase, N-terminal IF561_13555 IPR020843 Polyketide synthase, enoylreductase domain IF561_13555 IPR014188 Acrylyl-CoA reductase AcuI IF561_13555 IPR013149 Alcohol dehydrogenase, C-terminal IF561_13560 IPR020613 Thiolase, conserved site IF561_13560 IPR020617 Thiolase, C-terminal IF561_13560 IPR020610 Thiolase, active site IF561_13560 IPR020615 Thiolase, acyl-enzyme intermediate active site IF561_13560 IPR020616 Thiolase, N-terminal IF561_13560 IPR002155 Thiolase IF561_13560 IPR012805 Acetyl-CoA C-acyltransferase FadA IF561_13560 IPR016039 Thiolase-like IF561_13565 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IF561_13565 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IF561_13565 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IF561_13565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_13565 IPR029045 ClpP/crotonase-like domain superfamily IF561_13565 IPR001753 Enoyl-CoA hydratase/isomerase IF561_13565 IPR012799 Fatty oxidation complex, alpha subunit FadB IF561_13565 IPR036291 NAD(P)-binding domain superfamily IF561_13570 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_13570 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site IF561_13570 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal IF561_13570 IPR036956 Impact, N-terminal domain superfamily IF561_13570 IPR023582 Impact family IF561_13570 IPR015796 Impact family, bacterial/archaeal IF561_13570 IPR035647 EF-G domain III/V-like IF561_13570 IPR001498 Impact, N-terminal IF561_13575 IPR003445 Cation transporter IF561_13575 IPR004772 TrkH potassium transport family IF561_13580 IPR008254 Flavodoxin/nitric oxide synthase IF561_13580 IPR001226 Flavodoxin, conserved site IF561_13580 IPR026816 Flavodoxin domain IF561_13580 IPR029039 Flavoprotein-like superfamily IF561_13625 IPR003691 Putative fluoride ion transporter CrcB IF561_13630 IPR037509 Phosphomethylpyrimidine synthase IF561_13630 IPR025747 ThiC-associated domain IF561_13630 IPR038521 ThiC/Bza superfamily IF561_13630 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B IF561_13635 IPR034291 Thiamine phosphate synthase IF561_13635 IPR036206 Thiamin phosphate synthase superfamily IF561_13635 IPR022998 Thiamine phosphate synthase/TenI IF561_13635 IPR013785 Aldolase-type TIM barrel IF561_13640 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF IF561_13640 IPR000594 THIF-type NAD/FAD binding fold IF561_13640 IPR035985 Ubiquitin-activating enzyme IF561_13645 IPR012675 Beta-grasp domain superfamily IF561_13645 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IF561_13645 IPR010035 ThiS, thiamine-biosynthesis IF561_13645 IPR003749 Sulfur carrier ThiS/MoaD-like IF561_13650 IPR013785 Aldolase-type TIM barrel IF561_13650 IPR033983 Thiazole synthase ThiG IF561_13650 IPR008867 Thiazole synthase IF561_13655 IPR034428 ThiH/NocL/HydG-like IF561_13655 IPR013785 Aldolase-type TIM barrel IF561_13655 IPR010722 Biotin and thiamin synthesis-associated domain IF561_13655 IPR007197 Radical SAM IF561_13655 IPR012726 Thiazole biosynthesis ThiH IF561_13660 IPR000994 Peptidase M24 IF561_13660 IPR000587 Creatinase, N-terminal IF561_13660 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IF561_13660 IPR000587 Creatinase, N-terminal IF561_13660 IPR001714 Peptidase M24, methionine aminopeptidase IF561_13660 IPR000994 Peptidase M24 IF561_13660 IPR001714 Peptidase M24, methionine aminopeptidase IF561_13660 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IF561_13660 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IF561_13660 IPR036005 Creatinase/aminopeptidase-like IF561_13660 IPR036005 Creatinase/aminopeptidase-like IF561_13660 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IF561_13665 IPR000847 Transcription regulator HTH, LysR IF561_13665 IPR023746 Transcription regulator HTH, YidZ IF561_13665 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13665 IPR036390 Winged helix DNA-binding domain superfamily IF561_13665 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain IF561_13665 IPR005119 LysR, substrate-binding IF561_13670 IPR011701 Major facilitator superfamily IF561_13670 IPR020846 Major facilitator superfamily domain IF561_13670 IPR036259 MFS transporter superfamily IF561_13670 IPR023697 Multidrug resistance protein MdtL IF561_13690 IPR036237 Xylose isomerase-like superfamily IF561_13690 IPR007801 Uncharacterised protein family UPF0276 IF561_13700 IPR013986 DExx box DNA helicase domain superfamily IF561_13700 IPR005753 DNA helicase, ATP-dependent, UvrD type IF561_13700 IPR014017 UvrD-like DNA helicase, C-terminal IF561_13700 IPR000212 DNA helicase, UvrD/REP type IF561_13700 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13700 IPR014016 UvrD-like helicase, ATP-binding domain IF561_13700 IPR034739 UvrD/AddA helicase, N-terminal IF561_13705 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_13705 IPR000101 Gamma-glutamyltranspeptidase IF561_13710 IPR004778 Homoserine/Threonine efflux protein IF561_13710 IPR001123 Amino acid exporter protein, LeuE-type IF561_13720 IPR000620 EamA domain IF561_13720 IPR004626 RarD protein IF561_13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13725 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13725 IPR018982 RQC domain IF561_13725 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain IF561_13725 IPR002121 HRDC domain IF561_13725 IPR001650 Helicase, C-terminal IF561_13725 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_13725 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial IF561_13725 IPR004589 DNA helicase, ATP-dependent, RecQ type IF561_13725 IPR011545 DEAD/DEAH box helicase domain IF561_13725 IPR010997 HRDC-like superfamily IF561_13735 IPR003744 Queuosine precursor transporter IF561_13740 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase IF561_13740 IPR003695 Ppx/GppA phosphatase IF561_13740 IPR030673 Pyrophosphatase, GppA/Ppx-type IF561_13745 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_13745 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13745 IPR001650 Helicase, C-terminal IF561_13745 IPR023554 ATP-dependent RNA helicase RhlB type IF561_13745 IPR011545 DEAD/DEAH box helicase domain IF561_13745 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_13745 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_13750 IPR036249 Thioredoxin-like superfamily IF561_13750 IPR017937 Thioredoxin, conserved site IF561_13750 IPR013766 Thioredoxin domain IF561_13750 IPR005746 Thioredoxin IF561_13755 IPR036269 Rho termination factor, N-terminal domain superfamily IF561_13755 IPR004665 Transcription termination factor Rho IF561_13755 IPR011113 Rho termination factor, RNA-binding domain IF561_13755 IPR011112 Rho termination factor, N-terminal IF561_13755 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13755 IPR041703 Transcription termination factor Rho, ATP binding domain IF561_13755 IPR011129 Cold shock domain IF561_13755 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_13755 IPR003593 AAA+ ATPase domain IF561_13755 IPR012340 Nucleic acid-binding, OB-fold IF561_13765 IPR002830 UbiD decarboxylyase family IF561_13770 IPR001055 Adrenodoxin IF561_13770 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria IF561_13770 IPR012675 Beta-grasp domain superfamily IF561_13770 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_13770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_13770 IPR018298 Adrenodoxin, iron-sulphur binding site IF561_13775 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_13775 IPR017938 Riboflavin synthase-like beta-barrel IF561_13775 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_13775 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_13815 IPR005254 Heme biosynthesis-associated TPR protein IF561_13815 IPR010817 HemY, N-terminal IF561_13815 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_13820 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX IF561_13825 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily IF561_13825 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase IF561_13825 IPR039793 Uroporphyrinogen-III synthase IF561_13830 IPR000860 Porphobilinogen deaminase IF561_13830 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site IF561_13830 IPR022417 Porphobilinogen deaminase, N-terminal IF561_13830 IPR022418 Porphobilinogen deaminase, C-terminal IF561_13830 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily IF561_13835 IPR024685 Adenylate cyclase class-I, N-terminal domain IF561_13835 IPR024686 Adenylate cyclase class-I, conserved site IF561_13835 IPR000274 Adenylate cyclase, class-I IF561_13840 IPR036524 Frataxin/CyaY superfamily IF561_13840 IPR020895 Frataxin conserved site IF561_13840 IPR002908 Frataxin/CyaY IF561_13850 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site IF561_13850 IPR000183 Ornithine/DAP/Arg decarboxylase IF561_13850 IPR029066 PLP-binding barrel IF561_13850 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site IF561_13850 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IF561_13850 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IF561_13850 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_13850 IPR002986 Diaminopimelate decarboxylase, LysA IF561_13855 IPR018510 Diaminopimelate epimerase, active site IF561_13855 IPR001653 Diaminopimelate epimerase, DapF IF561_13860 IPR007435 Protein of unknown function DUF484 IF561_13860 IPR029016 GAF-like domain superfamily IF561_13865 IPR023009 Tyrosine recombinase XerC/XerD IF561_13865 IPR011931 Tyrosine recombinase XerC IF561_13865 IPR004107 Integrase, SAM-like, N-terminal IF561_13865 IPR010998 Integrase/recombinase, N-terminal IF561_13865 IPR002104 Integrase, catalytic domain IF561_13865 IPR011010 DNA breaking-rejoining enzyme, catalytic core IF561_13865 IPR013762 Integrase-like, catalytic domain superfamily IF561_13870 IPR036412 HAD-like superfamily IF561_13870 IPR006439 HAD hydrolase, subfamily IA IF561_13870 IPR041492 Haloacid dehalogenase-like hydrolase IF561_13870 IPR023214 HAD superfamily IF561_13875 IPR019494 FIST, C-domain IF561_13875 IPR000160 GGDEF domain IF561_13875 IPR029787 Nucleotide cyclase IF561_13875 IPR001633 EAL domain IF561_13875 IPR035919 EAL domain superfamily IF561_13875 IPR013702 FIST domain, N-terminal IF561_13880 IPR039262 DTW domain-containing protein 2 IF561_13880 IPR005636 DTW IF561_13895 IPR000150 Cof family IF561_13895 IPR036412 HAD-like superfamily IF561_13895 IPR006379 HAD-superfamily hydrolase, subfamily IIB IF561_13895 IPR023214 HAD superfamily IF561_13900 IPR029058 Alpha/Beta hydrolase fold IF561_13900 IPR022742 Serine aminopeptidase, S33 IF561_13905 IPR001123 Amino acid exporter protein, LeuE-type IF561_13910 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing IF561_13910 IPR035919 EAL domain superfamily IF561_13910 IPR001633 EAL domain IF561_13910 IPR013976 Metal-dependent hydrolase HDOD IF561_13915 IPR011991 ArsR-like helix-turn-helix domain IF561_13915 IPR001845 HTH ArsR-type DNA-binding domain IF561_13915 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_13915 IPR036390 Winged helix DNA-binding domain superfamily IF561_13920 IPR036291 NAD(P)-binding domain superfamily IF561_13920 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IF561_13920 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IF561_13920 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IF561_13920 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IF561_13920 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IF561_13970 IPR002771 Multiple antibiotic resistance (MarC)-related IF561_13980 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_13980 IPR004398 RNA methyltransferase, RsmD IF561_13980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_13985 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IF561_13985 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IF561_13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13985 IPR004390 Signal-recognition particle receptor FtsY IF561_13985 IPR013822 Signal recognition particle SRP54, helical bundle IF561_13985 IPR003593 AAA+ ATPase domain IF561_13985 IPR036225 SRP/SRP receptor, N-terminal IF561_13990 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_13990 IPR003439 ABC transporter-like IF561_13990 IPR017871 ABC transporter, conserved site IF561_13990 IPR005286 Cell division protein FtsE, ATP-binding IF561_13990 IPR003593 AAA+ ATPase domain IF561_13995 IPR004513 Cell division protein FtsX IF561_13995 IPR040690 FtsX, extracellular domain IF561_14000 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria IF561_14000 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_14000 IPR013325 RNA polymerase sigma factor, region 2 IF561_14000 IPR007627 RNA polymerase sigma-70 region 2 IF561_14000 IPR009042 RNA polymerase sigma-70 region 1.2 IF561_14000 IPR000943 RNA polymerase sigma-70 IF561_14000 IPR014284 RNA polymerase sigma-70 like domain IF561_14000 IPR007630 RNA polymerase sigma-70 region 4 IF561_14005 IPR001763 Rhodanese-like domain IF561_14005 IPR036873 Rhodanese-like domain superfamily IF561_14005 IPR023695 Thiosulfate sulfurtransferase, bacterial IF561_14010 IPR023662 Rhomboid protease GlpG IF561_14010 IPR038236 GlpG peptidase, N-terminal domain superfamily IF561_14010 IPR022764 Peptidase S54, rhomboid domain IF561_14010 IPR022732 Peptidase S54, GlpG peptidase, N-terminal IF561_14010 IPR035952 Rhomboid-like superfamily IF561_14015 IPR005503 Flagellar basal body-associated protein FliL IF561_14020 IPR007440 Chorismate--pyruvate lyase IF561_14020 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IF561_14025 IPR006370 4-hydroxybenzoate polyprenyltransferase-like IF561_14025 IPR039653 Prenyltransferase IF561_14025 IPR000537 UbiA prenyltransferase family IF561_14030 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase IF561_14030 IPR002123 Phospholipid/glycerol acyltransferase IF561_14030 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB IF561_14030 IPR041728 GPAT/DHAPAT, acyltransferase domain IF561_14035 IPR015927 Peptidase S24/S26A/S26B/S26C IF561_14035 IPR006200 Transcription regulator LexA IF561_14035 IPR039418 LexA-like IF561_14035 IPR036286 LexA/Signal peptidase-like superfamily IF561_14035 IPR006199 LexA repressor, DNA-binding domain IF561_14035 IPR006197 Peptidase S24, LexA-like IF561_14035 IPR036390 Winged helix DNA-binding domain superfamily IF561_14035 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14040 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp IF561_14040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_14040 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP IF561_14045 IPR002528 Multi antimicrobial extrusion protein IF561_14050 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IF561_14050 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IF561_14050 IPR022962 Soluble pyridine nucleotide transhydrogenase IF561_14050 IPR023753 FAD/NAD(P)-binding domain IF561_14050 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IF561_14050 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_14055 IPR023764 Transcriptional repressor HTH, FabR IF561_14055 IPR009057 Homeobox-like domain superfamily IF561_14055 IPR001647 DNA-binding HTH domain, TetR-type IF561_14065 IPR030390 RNA methyltransferase TrmA, active site IF561_14065 IPR030391 RNA methyltransferase TrmA, conserved site IF561_14065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_14065 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA IF561_14065 IPR010280 (Uracil-5)-methyltransferase family IF561_14070 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_14070 IPR010916 TonB box, conserved site IF561_14070 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_14070 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_14070 IPR010917 TonB-dependent receptor, conserved site IF561_14070 IPR010101 TonB-dependent vitamin B12 transporter BtuB IF561_14070 IPR039426 Vitamin B12 transporter BtuB-like IF561_14070 IPR012910 TonB-dependent receptor, plug domain IF561_14080 IPR015942 Asp/Glu/hydantoin racemase IF561_14080 IPR001920 Asp/Glu racemase IF561_14080 IPR004391 Glutamate racemase IF561_14080 IPR018187 Asp/Glu racemase, active site 1 IF561_14145 IPR001736 Phospholipase D/Transphosphatidylase IF561_14145 IPR025202 Phospholipase D-like domain IF561_14145 IPR016270 CDP-alcohol phosphatidyltransferase class-II family IF561_14155 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily IF561_14155 IPR016167 FAD-binding, type PCMH, subdomain 1 IF561_14155 IPR036318 FAD-binding, type PCMH-like superfamily IF561_14155 IPR016166 FAD-binding domain, PCMH-type IF561_14155 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal IF561_14155 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_14155 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase IF561_14155 IPR006094 FAD linked oxidase, N-terminal IF561_14160 IPR036390 Winged helix DNA-binding domain superfamily IF561_14160 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14160 IPR008988 Transcriptional repressor, C-terminal IF561_14160 IPR013196 Helix-turn-helix, type 11 IF561_14160 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IF561_14160 IPR003142 Biotin protein ligase, C-terminal IF561_14160 IPR004409 Biotin operon repressor, helix-turn-helix domain IF561_14160 IPR004408 Biotin--acetyl-CoA-carboxylase ligase IF561_14160 IPR030855 Bifunctional ligase/repressor BirA IF561_14165 IPR006083 Phosphoribulokinase/uridine kinase IF561_14165 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14165 IPR004566 Pantothenate kinase IF561_14190 IPR000795 Transcription factor, GTP-binding domain IF561_14190 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IF561_14190 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IF561_14190 IPR009000 Translation protein, beta-barrel domain superfamily IF561_14190 IPR005225 Small GTP-binding protein domain IF561_14190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14190 IPR031157 Tr-type G domain, conserved site IF561_14190 IPR033720 Elongation factor Tu, domain 2 IF561_14190 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_14190 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IF561_14190 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IF561_14195 IPR005807 SecE subunit of protein translocation complex, bacterial-like IF561_14195 IPR038379 SecE superfamily IF561_14195 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit IF561_14200 IPR008991 Translation protein SH3-like domain superfamily IF561_14200 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site IF561_14200 IPR005824 KOW IF561_14200 IPR014722 Ribosomal protein L2, domain 2 IF561_14200 IPR036735 NusG, N-terminal domain superfamily IF561_14200 IPR001062 Transcription antitermination protein, NusG IF561_14200 IPR006645 NusG, N-terminal IF561_14205 IPR020784 Ribosomal protein L11, N-terminal IF561_14205 IPR020785 Ribosomal protein L11, conserved site IF561_14205 IPR006519 Ribosomal protein L11, bacterial-type IF561_14205 IPR020783 Ribosomal protein L11, C-terminal IF561_14205 IPR000911 Ribosomal protein L11/L12 IF561_14205 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IF561_14205 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IF561_14210 IPR002143 Ribosomal protein L1 IF561_14210 IPR023674 Ribosomal protein L1-like IF561_14210 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IF561_14210 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IF561_14210 IPR023673 Ribosomal protein L1, conserved site IF561_14210 IPR005878 Ribosomal protein L1, bacterial-type IF561_14215 IPR022973 Ribosomal protein L10 IF561_14215 IPR001790 Ribosomal protein L10P IF561_14220 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily IF561_14220 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IF561_14220 IPR013823 Ribosomal protein L7/L12, C-terminal IF561_14220 IPR008932 Ribosomal protein L7/L12, oligomerisation IF561_14220 IPR000206 Ribosomal protein L7/L12 IF561_14225 IPR014724 RNA polymerase Rpb2, OB-fold IF561_14225 IPR007641 RNA polymerase Rpb2, domain 7 IF561_14225 IPR007645 RNA polymerase Rpb2, domain 3 IF561_14225 IPR037034 RNA polymerase Rpb2, domain 2 superfamily IF561_14225 IPR007642 RNA polymerase Rpb2, domain 2 IF561_14225 IPR007121 RNA polymerase, beta subunit, conserved site IF561_14225 IPR007644 RNA polymerase, beta subunit, protrusion IF561_14225 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain IF561_14225 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IF561_14225 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain IF561_14225 IPR015712 DNA-directed RNA polymerase, subunit 2 IF561_14225 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type IF561_14230 IPR007081 RNA polymerase Rpb1, domain 5 IF561_14230 IPR042102 RNA polymerase Rpb1, domain 3 superfamily IF561_14230 IPR038120 RNA polymerase Rpb1, funnel domain superfamily IF561_14230 IPR007080 RNA polymerase Rpb1, domain 1 IF561_14230 IPR006592 RNA polymerase, N-terminal IF561_14230 IPR000722 RNA polymerase, alpha subunit IF561_14230 IPR012754 DNA-directed RNA polymerase, subunit beta-prime IF561_14230 IPR007066 RNA polymerase Rpb1, domain 3 IF561_14230 IPR007083 RNA polymerase Rpb1, domain 4 IF561_14235 IPR038309 Rsd/AlgQ superfamily IF561_14235 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd IF561_14235 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IF561_14240 IPR022925 NADH pyrophosphatase NudC IF561_14240 IPR015797 NUDIX hydrolase-like domain superfamily IF561_14240 IPR000086 NUDIX hydrolase domain IF561_14240 IPR020084 NUDIX hydrolase, conserved site IF561_14240 IPR015376 Zinc ribbon, NADH pyrophosphatase IF561_14255 IPR038071 UROD/MetE-like superfamily IF561_14255 IPR000257 Uroporphyrinogen decarboxylase (URO-D) IF561_14255 IPR006361 Uroporphyrinogen decarboxylase HemE IF561_14260 IPR005122 Uracil-DNA glycosylase-like IF561_14260 IPR036895 Uracil-DNA glycosylase-like domain superfamily IF561_14265 IPR036291 NAD(P)-binding domain superfamily IF561_14265 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IF561_14265 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IF561_14265 IPR023514 Glyoxylate/hydroxypyruvate reductase A IF561_14270 IPR007338 Protein of unknown function DUF416 IF561_14270 IPR023381 YP001051499.1-like domain superfamily IF561_14275 IPR002550 CNNM, transmembrane domain IF561_14275 IPR000644 CBS domain IF561_14280 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_14280 IPR020816 Histone-like DNA-binding protein, conserved site IF561_14280 IPR000119 Histone-like DNA-binding protein IF561_14290 IPR011054 Rudiment single hybrid motif IF561_14290 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal IF561_14290 IPR020560 Phosphoribosylglycinamide synthetase, C-domain IF561_14290 IPR020559 Phosphoribosylglycinamide synthetase, conserved site IF561_14290 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IF561_14290 IPR016185 Pre-ATP-grasp domain superfamily IF561_14290 IPR013815 ATP-grasp fold, subdomain 1 IF561_14290 IPR011761 ATP-grasp fold IF561_14290 IPR000115 Phosphoribosylglycinamide synthetase IF561_14290 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily IF561_14295 IPR024051 AICAR transformylase, duplicated domain superfamily IF561_14295 IPR016193 Cytidine deaminase-like IF561_14295 IPR011607 Methylglyoxal synthase-like domain IF561_14295 IPR036914 Methylglyoxal synthase-like domain superfamily IF561_14295 IPR002695 Bifunctional purine biosynthesis protein PurH-like IF561_14300 IPR000551 MerR-type HTH domain IF561_14300 IPR009061 Putative DNA-binding domain superfamily IF561_14300 IPR011788 Zn(II)-responsive transcriptional regulator IF561_14310 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14310 IPR039420 Transcriptional regulatory protein WalR-like IF561_14310 IPR040970 CadC C-terminal domain 1 IF561_14310 IPR016032 Signal transduction response regulator, C-terminal effector IF561_14310 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_14310 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_14315 IPR002293 Amino acid/polyamine transporter I IF561_14315 IPR004754 Amino acid antiporter IF561_14320 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal IF561_14320 IPR000310 Orn/Lys/Arg decarboxylase, major domain IF561_14320 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal IF561_14320 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily IF561_14320 IPR015424 Pyridoxal phosphate-dependent transferase IF561_14320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_14320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_14320 IPR011193 Ornithine/lysine/arginine decarboxylase IF561_14375 IPR007894 MASE2 IF561_14375 IPR029787 Nucleotide cyclase IF561_14375 IPR000160 GGDEF domain IF561_14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14380 IPR017871 ABC transporter, conserved site IF561_14380 IPR003439 ABC transporter-like IF561_14380 IPR032781 ABC-transporter extension domain IF561_14380 IPR003593 AAA+ ATPase domain IF561_14385 IPR011701 Major facilitator superfamily IF561_14385 IPR020846 Major facilitator superfamily domain IF561_14385 IPR036259 MFS transporter superfamily IF561_14385 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IF561_14390 IPR005412 DNA-binding protein Fis IF561_14390 IPR009057 Homeobox-like domain superfamily IF561_14390 IPR002197 DNA binding HTH domain, Fis-type IF561_14395 IPR018517 tRNA-dihydrouridine synthase, conserved site IF561_14395 IPR001269 tRNA-dihydrouridine synthase IF561_14395 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 IF561_14395 IPR013785 Aldolase-type TIM barrel IF561_14395 IPR032887 tRNA-dihydrouridine synthase B IF561_14395 IPR035587 DUS-like, FMN-binding domain IF561_14395 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal IF561_14400 IPR004498 Ribosomal protein L11 methyltransferase IF561_14400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_14405 IPR011054 Rudiment single hybrid motif IF561_14405 IPR016185 Pre-ATP-grasp domain superfamily IF561_14405 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IF561_14405 IPR005482 Biotin carboxylase, C-terminal IF561_14405 IPR005481 Biotin carboxylase-like, N-terminal domain IF561_14405 IPR013815 ATP-grasp fold, subdomain 1 IF561_14405 IPR011761 ATP-grasp fold IF561_14405 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase IF561_14405 IPR011764 Biotin carboxylation domain IF561_14410 IPR001249 Acetyl-CoA biotin carboxyl carrier IF561_14410 IPR001882 Biotin-binding site IF561_14410 IPR000089 Biotin/lipoyl attachment IF561_14410 IPR011053 Single hybrid motif IF561_14415 IPR036441 Dehydroquinase, class II superfamily IF561_14415 IPR018509 Dehydroquinase, class II, conserved site IF561_14415 IPR001874 Dehydroquinase, class II IF561_14420 IPR011904 Acetate-CoA ligase IF561_14420 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain IF561_14420 IPR025110 AMP-binding enzyme, C-terminal domain IF561_14420 IPR020845 AMP-binding, conserved site IF561_14420 IPR000873 AMP-dependent synthetase/ligase IF561_14420 IPR042099 AMP-dependent synthetase-like superfamily IF561_14435 IPR036259 MFS transporter superfamily IF561_14435 IPR026032 Probable 3-phenylpropionic acid transporter IF561_14435 IPR024989 Major facilitator superfamily associated domain IF561_14440 IPR011006 CheY-like superfamily IF561_14440 IPR001789 Signal transduction response regulator, receiver domain IF561_14440 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_14440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_14440 IPR037952 Sensor histidine kinase TorS, sensor domain IF561_14440 IPR038188 TorS, sensor domain superfamily IF561_14440 IPR036641 HPT domain superfamily IF561_14440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_14440 IPR005467 Histidine kinase domain IF561_14440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_14440 IPR003594 Histidine kinase/HSP90-like ATPase IF561_14440 IPR003660 HAMP domain IF561_14440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_14445 IPR008948 L-Aspartase-like IF561_14445 IPR022761 Fumarate lyase, N-terminal IF561_14445 IPR000362 Fumarate lyase family IF561_14445 IPR018951 Fumarase C, C-terminal IF561_14445 IPR024083 Fumarase/histidase, N-terminal IF561_14445 IPR005677 Fumarate hydratase, class II IF561_14445 IPR020557 Fumarate lyase, conserved site IF561_14460 IPR038377 Sodium/glucose symporter superfamily IF561_14460 IPR001734 Sodium/solute symporter IF561_14460 IPR019899 Sodium/solute symporter, VC2705 subfamily IF561_14470 IPR006037 Regulator of K+ conductance, C-terminal IF561_14470 IPR023729 K(+)/H(+) antiporter NhaP2 IF561_14470 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_14470 IPR006153 Cation/H+ exchanger IF561_14470 IPR036318 FAD-binding, type PCMH-like superfamily IF561_14470 IPR005170 Transporter-associated domain IF561_14470 IPR038770 Sodium/solute symporter superfamily IF561_14470 IPR030151 K(+)/H(+) antiporter NhaP IF561_14470 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_14475 IPR000792 Transcription regulator LuxR, C-terminal IF561_14475 IPR001789 Signal transduction response regulator, receiver domain IF561_14475 IPR011006 CheY-like superfamily IF561_14475 IPR016032 Signal transduction response regulator, C-terminal effector IF561_14480 IPR013766 Thioredoxin domain IF561_14480 IPR017937 Thioredoxin, conserved site IF561_14480 IPR036249 Thioredoxin-like superfamily IF561_14480 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain IF561_14480 IPR035671 DsbD gamma IF561_14480 IPR003834 Cytochrome C biogenesis protein, transmembrane domain IF561_14480 IPR022910 Thiol:disulphide interchange protein DsbD IF561_14480 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily IF561_14485 IPR004668 Anaerobic c4-dicarboxylate membrane transporter IF561_14490 IPR008948 L-Aspartase-like IF561_14490 IPR000362 Fumarate lyase family IF561_14490 IPR020557 Fumarate lyase, conserved site IF561_14490 IPR018951 Fumarase C, C-terminal IF561_14490 IPR024083 Fumarase/histidase, N-terminal IF561_14490 IPR004708 Aspartate ammonia-lyase IF561_14490 IPR022761 Fumarate lyase, N-terminal IF561_14495 IPR007313 FxsA cytoplasmic membrane protein IF561_14500 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_14500 IPR001537 tRNA/rRNA methyltransferase, SpoU type IF561_14500 IPR029028 Alpha/beta knot methyltransferases IF561_14500 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase IF561_14505 IPR001189 Manganese/iron superoxide dismutase IF561_14505 IPR019832 Manganese/iron superoxide dismutase, C-terminal IF561_14505 IPR019831 Manganese/iron superoxide dismutase, N-terminal IF561_14505 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IF561_14505 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IF561_14505 IPR019833 Manganese/iron superoxide dismutase, binding site IF561_14510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_14510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_14510 IPR005467 Histidine kinase domain IF561_14510 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_14510 IPR003594 Histidine kinase/HSP90-like ATPase IF561_14510 IPR003660 HAMP domain IF561_14510 IPR038515 CpxA, periplasmic domain superfamily IF561_14510 IPR032404 Two-component sensor protein CpxA, periplasmic domain IF561_14510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_14515 IPR011006 CheY-like superfamily IF561_14515 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_14515 IPR001789 Signal transduction response regulator, receiver domain IF561_14515 IPR039420 Transcriptional regulatory protein WalR-like IF561_14515 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14520 IPR012899 LTXXQ motif family protein IF561_14525 IPR036837 Cation efflux protein, cytoplasmic domain superfamily IF561_14525 IPR027470 Cation efflux protein, cytoplasmic domain IF561_14525 IPR023783 Cation efflux pump FieF IF561_14525 IPR027469 Cation efflux transmembrane domain superfamily IF561_14525 IPR002524 Cation efflux protein IF561_14530 IPR022953 ATP-dependent 6-phosphofructokinase IF561_14530 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type IF561_14530 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic IF561_14530 IPR015912 Phosphofructokinase, conserved site IF561_14530 IPR000023 Phosphofructokinase domain IF561_14530 IPR035966 Phosphofructokinase superfamily IF561_14535 IPR002528 Multi antimicrobial extrusion protein IF561_14540 IPR011032 GroES-like superfamily IF561_14540 IPR020818 GroES chaperonin family IF561_14540 IPR037124 GroES chaperonin superfamily IF561_14540 IPR018369 Chaperonin GroES, conserved site IF561_14545 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IF561_14545 IPR027413 GroEL-like equatorial domain superfamily IF561_14545 IPR027409 GroEL-like apical domain superfamily IF561_14545 IPR001844 Chaperonin Cpn60 IF561_14545 IPR002423 Chaperonin Cpn60/TCP-1 family IF561_14545 IPR018370 Chaperonin Cpn60, conserved site IF561_14555 IPR003416 MgtC/SapB/SrpB/YhiD family IF561_14560 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site IF561_14560 IPR000821 Alanine racemase IF561_14560 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_14560 IPR011079 Alanine racemase, C-terminal IF561_14560 IPR001608 Alanine racemase, N-terminal IF561_14560 IPR029066 PLP-binding barrel IF561_14565 IPR022462 Lysine-2,3-aminomutase-like IF561_14565 IPR013785 Aldolase-type TIM barrel IF561_14565 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IF561_14565 IPR007197 Radical SAM IF561_14570 IPR011768 Translation elongation factor P IF561_14570 IPR013852 Translation elongation factor P/YeiP, conserved site IF561_14570 IPR008991 Translation protein SH3-like domain superfamily IF561_14570 IPR013185 Translation elongation factor, KOW-like IF561_14570 IPR001059 Translation elongation factor P/YeiP, central IF561_14570 IPR020599 Translation elongation factor P/YeiP IF561_14570 IPR014722 Ribosomal protein L2, domain 2 IF561_14570 IPR012340 Nucleic acid-binding, OB-fold IF561_14570 IPR015365 Elongation factor P, C-terminal IF561_14580 IPR003418 Fumarate reductase, subunit D IF561_14580 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IF561_14585 IPR003510 Fumarate reductase, subunit C IF561_14585 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IF561_14590 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein IF561_14590 IPR009051 Alpha-helical ferredoxin IF561_14590 IPR012675 Beta-grasp domain superfamily IF561_14590 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_14590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_14590 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IF561_14590 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_14590 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal IF561_14590 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_14595 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IF561_14595 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit IF561_14595 IPR005884 Fumarate reductase, flavoprotein subunit IF561_14595 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IF561_14595 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IF561_14595 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_14595 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IF561_14595 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IF561_14600 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IF561_14600 IPR006195 Aminoacyl-tRNA synthetase, class II IF561_14600 IPR004525 Elongation factor P--(R)-beta-lysine ligase IF561_14610 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_14610 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_14610 IPR013571 Transcription regulator QacR, C-terminal IF561_14610 IPR001647 DNA-binding HTH domain, TetR-type IF561_14610 IPR009057 Homeobox-like domain superfamily IF561_14620 IPR011055 Duplicated hybrid motif IF561_14620 IPR016047 Peptidase M23 IF561_14625 IPR001451 Hexapeptide repeat IF561_14625 IPR018357 Hexapeptide transferase, conserved site IF561_14625 IPR005881 Serine O-acetyltransferase IF561_14625 IPR011004 Trimeric LpxA-like superfamily IF561_14625 IPR010493 Serine acetyltransferase, N-terminal IF561_14625 IPR042122 Serine acetyltransferase, N-terminal domain superfamily IF561_14630 IPR036291 NAD(P)-binding domain superfamily IF561_14630 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal IF561_14630 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal IF561_14630 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent IF561_14630 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_14630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_14635 IPR003708 Bacterial protein export chaperone SecB IF561_14635 IPR035958 SecB-like superfamily IF561_14640 IPR036873 Rhodanese-like domain superfamily IF561_14640 IPR001763 Rhodanese-like domain IF561_14645 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_14645 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent IF561_14645 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily IF561_14645 IPR006124 Metalloenzyme IF561_14645 IPR011258 BPG-independent PGAM, N-terminal IF561_14655 IPR003660 HAMP domain IF561_14655 IPR004090 Chemotaxis methyl-accepting receptor IF561_14655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_14660 IPR031312 Sodium/sulphate symporter, conserved site IF561_14660 IPR001898 Solute carrier family 13 IF561_14665 IPR003817 Phosphatidylserine decarboxylase-related IF561_14665 IPR033177 Phosphatidylserine decarboxylase IF561_14665 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 IF561_14670 IPR010914 RsgA GTPase domain IF561_14670 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IF561_14670 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14670 IPR004881 Ribosome biogenesis GTPase RsgA IF561_14675 IPR012337 Ribonuclease H-like superfamily IF561_14675 IPR036397 Ribonuclease H superfamily IF561_14675 IPR022894 Oligoribonuclease IF561_14675 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_14745 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_14745 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_14745 IPR013542 Domain of unknown function DUF1730 IF561_14745 IPR004453 Epoxyqueuosine reductase QueG IF561_14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14750 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE IF561_14755 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IF561_14760 IPR002099 DNA mismatch repair protein family, N-terminal IF561_14760 IPR042120 MutL, C-terminal domain, dimerisation subdomain IF561_14760 IPR014790 MutL, C-terminal, dimerisation IF561_14760 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms IF561_14760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_14760 IPR014762 DNA mismatch repair, conserved site IF561_14760 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_14760 IPR020667 DNA mismatch repair protein, MutL IF561_14760 IPR042121 MutL, C-terminal domain, regulatory subdomain IF561_14760 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_14760 IPR013507 DNA mismatch repair protein, S5 domain 2-like IF561_14760 IPR037198 MutL, C-terminal domain superfamily IF561_14765 IPR018022 IPP transferase IF561_14765 IPR039657 Dimethylallyltransferase IF561_14765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14770 IPR010920 LSM domain superfamily IF561_14770 IPR005001 RNA-binding protein Hfq IF561_14775 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14775 IPR035647 EF-G domain III/V-like IF561_14775 IPR030394 HflX-type guanine nucleotide-binding (G) domain IF561_14775 IPR032305 GTP-binding protein, middle domain IF561_14775 IPR006073 GTP binding domain IF561_14775 IPR016496 GTPase HflX IF561_14775 IPR025121 GTPase HflX, N-terminal IF561_14775 IPR042108 GTPase HflX, N-terminal domain superfamily IF561_14780 IPR020980 Menbrane protein HflK, N-terminal IF561_14780 IPR010201 HflK IF561_14780 IPR036013 Band 7/SPFH domain superfamily IF561_14780 IPR001972 Stomatin family IF561_14780 IPR001107 Band 7 domain IF561_14785 IPR010200 HflC IF561_14785 IPR001107 Band 7 domain IF561_14785 IPR036013 Band 7/SPFH domain superfamily IF561_14790 IPR019201 Protein of unknown function DUF2065 IF561_14795 IPR033128 Adenylosuccinate synthase, active site IF561_14795 IPR042109 Adenylosuccinate synthetase, domain 1 IF561_14795 IPR018220 Adenylosuccinate synthase, GTP-binding site IF561_14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14795 IPR042110 Adenylosuccinate synthetase, domain 2 IF561_14795 IPR001114 Adenylosuccinate synthetase IF561_14795 IPR042111 Adenylosuccinate synthetase, domain 3 IF561_14800 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_14800 IPR006597 Sel1-like repeat IF561_14805 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_14805 IPR023950 Flavohemoprotein IF561_14805 IPR017938 Riboflavin synthase-like beta-barrel IF561_14805 IPR012292 Globin/Protoglobin IF561_14805 IPR000971 Globin IF561_14805 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_14805 IPR009050 Globin-like superfamily IF561_14805 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_14805 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain IF561_14805 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IF561_14810 IPR036390 Winged helix DNA-binding domain superfamily IF561_14810 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14810 IPR023761 Transcriptional repressor HTH, NsrR IF561_14810 IPR000944 Transcription regulator Rrf2-type IF561_14810 IPR030489 Transcription regulator Rrf2-type, conserved site IF561_14815 IPR012340 Nucleic acid-binding, OB-fold IF561_14815 IPR013223 Ribonuclease B, N-terminal OB domain IF561_14815 IPR001900 Ribonuclease II/R IF561_14815 IPR004476 Ribonuclease II/ribonuclease R IF561_14815 IPR011805 Ribonuclease R IF561_14815 IPR013668 Ribonuclease R winged-helix domain IF561_14815 IPR022967 RNA-binding domain, S1 IF561_14815 IPR003029 S1 domain IF561_14815 IPR011129 Cold shock domain IF561_14815 IPR022966 Ribonuclease II/R, conserved site IF561_14815 IPR040476 RNase II/RNase R, cold shock domain IF561_14820 IPR029028 Alpha/beta knot methyltransferases IF561_14820 IPR029064 50S ribosomal protein L30e-like IF561_14820 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB IF561_14820 IPR001537 tRNA/rRNA methyltransferase, SpoU type IF561_14820 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_14820 IPR004441 RNA methyltransferase TrmH family IF561_14820 IPR013123 RNA 2-O ribose methyltransferase, substrate binding IF561_14825 IPR036412 HAD-like superfamily IF561_14825 IPR006439 HAD hydrolase, subfamily IA IF561_14825 IPR006549 HAD-superfamily hydrolase,subfamily IIIA IF561_14825 IPR041492 Haloacid dehalogenase-like hydrolase IF561_14825 IPR023214 HAD superfamily IF561_14825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_14825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic IF561_14825 IPR037512 Phosphoglycolate phosphatase, prokaryotic IF561_14830 IPR002305 Aminoacyl-tRNA synthetase, class Ic IF561_14830 IPR002306 Tryptophan-tRNA ligase IF561_14830 IPR024109 Tryptophan-tRNA ligase, bacterial-type IF561_14830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_14845 IPR017926 Glutamine amidotransferase IF561_14845 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain IF561_14845 IPR029062 Class I glutamine amidotransferase-like IF561_14850 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria IF561_14850 IPR004636 Acetylornithine/Succinylornithine transaminase family IF561_14850 IPR015424 Pyridoxal phosphate-dependent transferase IF561_14850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_14850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_14850 IPR005814 Aminotransferase class-III IF561_14855 IPR016181 Acyl-CoA N-acyltransferase IF561_14855 IPR007041 Arginine N-succinyltransferase AstA/AruG IF561_14855 IPR017650 Arginine N-succinyltransferase IF561_14860 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_14860 IPR017649 Succinylglutamate-semialdehyde dehydrogenase IF561_14860 IPR015590 Aldehyde dehydrogenase domain IF561_14860 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_14860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_14860 IPR016161 Aldehyde/histidinol dehydrogenase IF561_14860 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_14870 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_14870 IPR018335 Transcription regulator HTH, Crp-type, conserved site IF561_14870 IPR014710 RmlC-like jelly roll fold IF561_14870 IPR012318 Crp-type HTH domain IF561_14870 IPR000595 Cyclic nucleotide-binding domain IF561_14870 IPR018488 Cyclic nucleotide-binding, conserved site IF561_14870 IPR018490 Cyclic nucleotide-binding-like IF561_14870 IPR036390 Winged helix DNA-binding domain superfamily IF561_14875 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14875 IPR006083 Phosphoribulokinase/uridine kinase IF561_14875 IPR006082 Phosphoribulokinase IF561_14880 IPR010648 Uncharacterised protein family UPF0270 IF561_14880 IPR036685 YehU-like superfamily IF561_14885 IPR000073 Alpha/beta hydrolase fold-1 IF561_14885 IPR000952 AB hydrolase 4, conserved site IF561_14885 IPR012020 AB hydrolase 4 family IF561_14885 IPR029058 Alpha/Beta hydrolase fold IF561_14895 IPR003593 AAA+ ATPase domain IF561_14895 IPR032781 ABC-transporter extension domain IF561_14895 IPR003439 ABC transporter-like IF561_14895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14895 IPR017871 ABC transporter, conserved site IF561_14900 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG IF561_14900 IPR029039 Flavoprotein-like superfamily IF561_14900 IPR003680 Flavodoxin-like fold IF561_14905 IPR038770 Sodium/solute symporter superfamily IF561_14905 IPR003148 Regulator of K+ conductance, N-terminal IF561_14905 IPR036291 NAD(P)-binding domain superfamily IF561_14905 IPR020884 Glutathione-regulated potassium-efflux system protein KefB IF561_14905 IPR004771 K+/H+ exchanger IF561_14905 IPR006153 Cation/H+ exchanger IF561_14915 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_14920 IPR000246 Peptidase T2, asparaginase 2 IF561_14920 IPR029055 Nucleophile aminohydrolases, N-terminal IF561_14925 IPR007236 SlyX IF561_14935 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal IF561_14935 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily IF561_14935 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_14940 IPR039446 Transcriptional regulator DauR-like IF561_14940 IPR039445 Transcriptional regulator DauR-like, HTH domain IF561_14940 IPR013559 YheO-like IF561_14945 IPR027396 DsrEFH-like IF561_14945 IPR003787 Sulphur relay, DsrE/F-like protein IF561_14945 IPR017463 Sulphur relay, TusD/DsrE IF561_14950 IPR027396 DsrEFH-like IF561_14950 IPR017462 Sulphur relay, TusC/DsrF IF561_14950 IPR003787 Sulphur relay, DsrE/F-like protein IF561_14955 IPR027396 DsrEFH-like IF561_14955 IPR023526 Sulphur relay, TusB IF561_14955 IPR007215 Sulphur relay, TusB/DsrH IF561_14960 IPR005679 Ribosomal protein S12, bacterial-type IF561_14960 IPR006032 Ribosomal protein S12/S23 IF561_14960 IPR012340 Nucleic acid-binding, OB-fold IF561_14965 IPR036823 Ribosomal protein S7 domain superfamily IF561_14965 IPR023798 Ribosomal protein S7 domain IF561_14965 IPR020606 Ribosomal protein S7, conserved site IF561_14965 IPR005717 Ribosomal protein S7, bacterial/organellar-type IF561_14965 IPR000235 Ribosomal protein S5/S7 IF561_14970 IPR041095 Elongation Factor G, domain II IF561_14970 IPR000640 Elongation factor EFG, domain V-like IF561_14970 IPR035649 EFG, domain V IF561_14970 IPR005517 Translation elongation factor EFG/EF2, domain IV IF561_14970 IPR004540 Translation elongation factor EFG/EF2 IF561_14970 IPR009000 Translation protein, beta-barrel domain superfamily IF561_14970 IPR000795 Transcription factor, GTP-binding domain IF561_14970 IPR005225 Small GTP-binding protein domain IF561_14970 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_14970 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_14970 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14970 IPR031157 Tr-type G domain, conserved site IF561_14970 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_14970 IPR009022 Elongation factor G, domain III IF561_14970 IPR035647 EF-G domain III/V-like IF561_14975 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IF561_14975 IPR033720 Elongation factor Tu, domain 2 IF561_14975 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IF561_14975 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IF561_14975 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IF561_14975 IPR009000 Translation protein, beta-barrel domain superfamily IF561_14975 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_14975 IPR005225 Small GTP-binding protein domain IF561_14975 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_14975 IPR000795 Transcription factor, GTP-binding domain IF561_14975 IPR031157 Tr-type G domain, conserved site IF561_14980 IPR007419 BFD-like [2Fe-2S]-binding domain IF561_14980 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily IF561_14985 IPR002024 Bacterioferritin IF561_14985 IPR012347 Ferritin-like IF561_14985 IPR009078 Ferritin-like superfamily IF561_14985 IPR008331 Ferritin/DPS protein domain IF561_14985 IPR009040 Ferritin-like diiron domain IF561_14990 IPR036291 NAD(P)-binding domain superfamily IF561_14990 IPR015884 Malic enzyme, conserved site IF561_14990 IPR012301 Malic enzyme, N-terminal domain IF561_14990 IPR037062 Malic enzyme, N-terminal domain superfamily IF561_14990 IPR012302 Malic enzyme, NAD-binding IF561_14990 IPR001891 Malic oxidoreductase IF561_14995 IPR010985 Ribbon-helix-helix IF561_14995 IPR023453 Methionine repressor MetJ domain superfamily IF561_14995 IPR002084 Methionine repressor MetJ IF561_15000 IPR015424 Pyridoxal phosphate-dependent transferase IF561_15000 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IF561_15000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_15000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_15000 IPR011821 O-succinylhomoserine (thiol)-lyase IF561_15005 IPR036393 Acetylglutamate kinase-like superfamily IF561_15005 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain IF561_15005 IPR001048 Aspartate/glutamate/uridylate kinase IF561_15005 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IF561_15005 IPR001341 Aspartate kinase IF561_15005 IPR018042 Aspartate kinase, conserved site IF561_15005 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I IF561_15005 IPR001342 Homoserine dehydrogenase, catalytic IF561_15005 IPR019811 Homoserine dehydrogenase, conserved site IF561_15005 IPR036291 NAD(P)-binding domain superfamily IF561_15010 IPR029041 FAD-linked oxidoreductase-like IF561_15010 IPR003171 Methylenetetrahydrofolate reductase IF561_15010 IPR004620 5,10-methylenetetrahydrofolate reductase IF561_15020 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type IF561_15020 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site IF561_15020 IPR021135 Phosphoenolpyruvate carboxylase IF561_15020 IPR033129 Phosphoenolpyruvate carboxylase, His active site IF561_15020 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_15025 IPR010169 Acetylornithine deacetylase ArgE IF561_15025 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IF561_15025 IPR036264 Bacterial exopeptidase dimerisation domain IF561_15025 IPR011650 Peptidase M20, dimerisation domain IF561_15025 IPR002933 Peptidase M20 IF561_15030 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site IF561_15030 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 IF561_15030 IPR036291 NAD(P)-binding domain superfamily IF561_15030 IPR000534 Semialdehyde dehydrogenase, NAD-binding IF561_15030 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IF561_15035 IPR037528 Acetylglutamate kinase ArgB IF561_15035 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic IF561_15035 IPR001048 Aspartate/glutamate/uridylate kinase IF561_15035 IPR036393 Acetylglutamate kinase-like superfamily IF561_15035 IPR004662 Acetylglutamate kinase family IF561_15040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_15040 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body IF561_15040 IPR023434 Argininosuccinate synthase, type 1 subfamily IF561_15040 IPR018223 Argininosuccinate synthase, conserved site IF561_15040 IPR001518 Argininosuccinate synthase IF561_15045 IPR008948 L-Aspartase-like IF561_15045 IPR016181 Acyl-CoA N-acyltransferase IF561_15045 IPR022761 Fumarate lyase, N-terminal IF561_15045 IPR000362 Fumarate lyase family IF561_15045 IPR000182 GNAT domain IF561_15045 IPR024083 Fumarase/histidase, N-terminal IF561_15045 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase IF561_15045 IPR029419 Argininosuccinate lyase, C-terminal IF561_15045 IPR020557 Fumarate lyase, conserved site IF561_15045 IPR009049 Argininosuccinate lyase IF561_15055 IPR011767 Glutaredoxin active site IF561_15055 IPR002109 Glutaredoxin IF561_15055 IPR011906 Glutaredoxin domain IF561_15055 IPR014025 Glutaredoxin subgroup IF561_15055 IPR037944 Peroxiredoxin-5-like IF561_15055 IPR013740 Redoxin IF561_15055 IPR036249 Thioredoxin-like superfamily IF561_15060 IPR036390 Winged helix DNA-binding domain superfamily IF561_15060 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_15060 IPR000847 Transcription regulator HTH, LysR IF561_15060 IPR005119 LysR, substrate-binding IF561_15065 IPR012338 Beta-lactamase/transpeptidase-like IF561_15065 IPR001264 Glycosyl transferase, family 51 IF561_15065 IPR023346 Lysozyme-like domain superfamily IF561_15065 IPR036950 Penicillin binding protein transglycosylase domain IF561_15065 IPR031376 Penicillin-binding protein, OB-like domain IF561_15065 IPR001460 Penicillin-binding protein, transpeptidase IF561_15075 IPR007813 Fimbrial assembly PilN IF561_15085 IPR007446 Pilus assembly protein PilP IF561_15090 IPR004846 Type II/III secretion system IF561_15090 IPR004845 Type II secretion system GspD, conserved site IF561_15090 IPR011662 Secretin/TonB, short N-terminal domain IF561_15090 IPR013355 Type IV pilus secretin PilQ IF561_15090 IPR005644 NolW-like IF561_15090 IPR001775 GspD/PilQ family IF561_15090 IPR021731 AMIN domain IF561_15090 IPR038591 NolW-like superfamily IF561_15095 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15095 IPR023000 Shikimate kinase, conserved site IF561_15095 IPR000623 Shikimate kinase/Threonine synthase-like 1 IF561_15095 IPR031322 Shikimate kinase/gluconokinase IF561_15100 IPR030960 3-dehydroquinate synthase domain IF561_15100 IPR030963 3-dehydroquinate synthase family IF561_15100 IPR016037 3-dehydroquinate synthase AroB IF561_15110 IPR012263 Adenine modification methylase, M.EcoRV-type IF561_15110 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_15110 IPR012327 D12 class N6 adenine-specific DNA methyltransferase IF561_15110 IPR023095 Adenine-specific methyltransferase, domain 2 IF561_15110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_15115 IPR000056 Ribulose-phosphate 3-epimerase-like IF561_15115 IPR013785 Aldolase-type TIM barrel IF561_15115 IPR026019 Ribulose-phosphate 3-epimerase IF561_15115 IPR011060 Ribulose-phosphate binding barrel IF561_15120 IPR020815 Ribosomal protein S6, conserved site IF561_15120 IPR000529 Ribosomal protein S6 IF561_15120 IPR035980 Ribosomal protein S6 superfamily IF561_15120 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IF561_15120 IPR020814 Ribosomal protein S6, plastid/chloroplast IF561_15125 IPR012340 Nucleic acid-binding, OB-fold IF561_15125 IPR000424 Primosome PriB/single-strand DNA-binding IF561_15125 IPR023646 Primosomal replication protein PriB IF561_15130 IPR001648 Ribosomal protein S18 IF561_15130 IPR018275 Ribosomal protein S18, conserved site IF561_15130 IPR036870 Ribosomal protein S18 superfamily IF561_15135 IPR020069 Ribosomal protein L9, C-terminal IF561_15135 IPR009027 Ribosomal protein L9/RNase H1, N-terminal IF561_15135 IPR036791 Ribosomal protein L9, C-terminal domain superfamily IF561_15135 IPR020070 Ribosomal protein L9, N-terminal IF561_15135 IPR036935 Ribosomal protein L9, N-terminal domain superfamily IF561_15135 IPR020594 Ribosomal protein L9, bacteria/chloroplast IF561_15135 IPR000244 Ribosomal protein L9 IF561_15145 IPR003593 AAA+ ATPase domain IF561_15145 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IF561_15145 IPR007692 DNA helicase, DnaB type IF561_15145 IPR007693 DNA helicase, DnaB-like, N-terminal IF561_15145 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IF561_15145 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15145 IPR007694 DNA helicase, DnaB-like, C-terminal IF561_15150 IPR029066 PLP-binding barrel IF561_15150 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site IF561_15150 IPR001608 Alanine racemase, N-terminal IF561_15150 IPR011079 Alanine racemase, C-terminal IF561_15150 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_15150 IPR000821 Alanine racemase IF561_15160 IPR035917 YjbQ-like superfamily IF561_15160 IPR001602 Uncharacterised protein family UPF0047 IF561_15165 IPR001672 Phosphoglucose isomerase (PGI) IF561_15165 IPR023096 Phosphoglucose isomerase, C-terminal IF561_15165 IPR035476 Phosphoglucose isomerase, SIS domain 1 IF561_15165 IPR035482 Phosphoglucose isomerase, SIS domain 2 IF561_15165 IPR018189 Phosphoglucose isomerase, conserved site IF561_15175 IPR002481 Ferric-uptake regulator IF561_15175 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_15175 IPR036390 Winged helix DNA-binding domain superfamily IF561_15180 IPR013785 Aldolase-type TIM barrel IF561_15180 IPR035587 DUS-like, FMN-binding domain IF561_15180 IPR001269 tRNA-dihydrouridine synthase IF561_15180 IPR018517 tRNA-dihydrouridine synthase, conserved site IF561_15180 IPR004653 tRNA-dihydrouridine(20/20a) synthase IF561_15200 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain IF561_15200 IPR017938 Riboflavin synthase-like beta-barrel IF561_15200 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_15200 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily IF561_15200 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_15200 IPR029039 Flavoprotein-like superfamily IF561_15200 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IF561_15200 IPR008254 Flavodoxin/nitric oxide synthase IF561_15200 IPR001094 Flavodoxin-like IF561_15200 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_15200 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria IF561_15200 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding IF561_15205 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IF561_15205 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IF561_15205 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit IF561_15205 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IF561_15205 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IF561_15210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_15210 IPR011800 Phosphoadenosine phosphosulphate reductase CysH IF561_15210 IPR002500 Phosphoadenosine phosphosulphate reductase IF561_15210 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase IF561_15270 IPR038770 Sodium/solute symporter superfamily IF561_15270 IPR018422 Cation/H+ exchanger, CPA1 family IF561_15270 IPR006153 Cation/H+ exchanger IF561_15275 IPR006158 Cobalamin (vitamin B12)-binding domain IF561_15275 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain IF561_15275 IPR033706 Methionine synthase, B12-binding domain IF561_15275 IPR003726 Homocysteine-binding domain IF561_15275 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily IF561_15275 IPR004223 Vitamin B12-dependent methionine synthase, activation domain IF561_15275 IPR000489 Pterin-binding domain IF561_15275 IPR036594 Methionine synthase domain IF561_15275 IPR011822 Cobalamin-dependent methionine synthase IF561_15275 IPR036724 Cobalamin-binding domain superfamily IF561_15275 IPR036589 Homocysteine-binding domain superfamily IF561_15275 IPR011005 Dihydropteroate synthase-like IF561_15280 IPR001048 Aspartate/glutamate/uridylate kinase IF561_15280 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain IF561_15280 IPR002912 ACT domain IF561_15280 IPR036393 Acetylglutamate kinase-like superfamily IF561_15280 IPR001341 Aspartate kinase IF561_15280 IPR005260 Aspartate kinase, monofunctional class IF561_15280 IPR018042 Aspartate kinase, conserved site IF561_15285 IPR000192 Aminotransferase class V domain IF561_15285 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_15285 IPR015424 Pyridoxal phosphate-dependent transferase IF561_15285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_15285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_15285 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase IF561_15295 IPR003439 ABC transporter-like IF561_15295 IPR017871 ABC transporter, conserved site IF561_15295 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15295 IPR004602 UvrABC system subunit A IF561_15295 IPR041552 UvrA DNA-binding domain IF561_15295 IPR041102 UvrA, interaction domain IF561_15300 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IF561_15300 IPR005835 Nucleotidyl transferase domain IF561_15300 IPR029044 Nucleotide-diphospho-sugar transferases IF561_15305 IPR016032 Signal transduction response regulator, C-terminal effector IF561_15305 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_15305 IPR000792 Transcription regulator LuxR, C-terminal IF561_15310 IPR011344 Single-stranded DNA-binding protein IF561_15310 IPR000424 Primosome PriB/single-strand DNA-binding IF561_15310 IPR012340 Nucleic acid-binding, OB-fold IF561_15315 IPR029787 Nucleotide cyclase IF561_15315 IPR000160 GGDEF domain IF561_15315 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 IF561_15315 IPR035919 EAL domain superfamily IF561_15315 IPR001633 EAL domain IF561_15335 IPR004845 Type II secretion system GspD, conserved site IF561_15335 IPR021731 AMIN domain IF561_15335 IPR001775 GspD/PilQ family IF561_15335 IPR005644 NolW-like IF561_15335 IPR038591 NolW-like superfamily IF561_15335 IPR013355 Type IV pilus secretin PilQ IF561_15335 IPR011662 Secretin/TonB, short N-terminal domain IF561_15335 IPR004846 Type II/III secretion system IF561_15340 IPR003593 AAA+ ATPase domain IF561_15340 IPR002477 Peptidoglycan binding-like IF561_15340 IPR036365 PGBD-like superfamily IF561_15340 IPR036366 PGBD superfamily IF561_15340 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15350 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_15350 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15350 IPR013374 ATPase, type IV, pilus assembly, PilB IF561_15350 IPR003593 AAA+ ATPase domain IF561_15350 IPR001482 Type II/IV secretion system protein IF561_15350 IPR007831 General secretory system II, protein E, N-terminal IF561_15350 IPR042181 Type II secretion system, protein E, N-terminal IF561_15355 IPR003004 GspF/PilC family IF561_15355 IPR018076 Type II secretion system F domain IF561_15355 IPR042094 Type II secretion system F domain superfamily IF561_15365 IPR012902 Prokaryotic N-terminal methylation site IF561_15400 IPR004753 Cell shape determining protein MreB IF561_15405 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 IF561_15405 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 IF561_15405 IPR007221 Rod shape-determining protein MreC IF561_15410 IPR007227 Cell shape-determining protein MreD IF561_15410 IPR026034 Cell shape-determining protein MreD, proteobacterial type IF561_15415 IPR029001 Inosine triphosphate pyrophosphatase-like IF561_15415 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IF561_15420 IPR012340 Nucleic acid-binding, OB-fold IF561_15420 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IF561_15420 IPR004659 Ribonuclease E/G IF561_15420 IPR022967 RNA-binding domain, S1 IF561_15420 IPR003029 S1 domain IF561_15425 IPR011836 Conserved hypothetical protein CHP02099 IF561_15425 IPR032712 AsmA-like, C-terminal IF561_15425 IPR025263 Domain of unknown function DUF3971 IF561_15430 IPR003010 Carbon-nitrogen hydrolase IF561_15430 IPR036526 Carbon-nitrogen hydrolase superfamily IF561_15430 IPR001110 Uncharacterised protein family UPF0012, conserved site IF561_15435 IPR035068 Metalloprotease TldD/PmbA, N-terminal IF561_15435 IPR002510 Metalloprotease TldD/PmbA IF561_15435 IPR036059 Metalloprotease TldD/PmbA superfamily IF561_15435 IPR025502 TldD IF561_15440 IPR029060 PIN-like domain superfamily IF561_15440 IPR003714 PhoH-like protein IF561_15440 IPR002716 PIN domain IF561_15440 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15445 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_15445 IPR001650 Helicase, C-terminal IF561_15445 IPR023949 RNA polymerase-associated protein RapA IF561_15445 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15445 IPR022737 RNA polymerase recycling, bacterial, C-terminal IF561_15445 IPR038718 SNF2-like, N-terminal domain superfamily IF561_15445 IPR000330 SNF2-related, N-terminal domain IF561_15445 IPR040765 RapA, N-terminal Tudor like domain 1 IF561_15445 IPR040766 RapA, N-terminal Tudor-like domain 2 IF561_15455 IPR006225 Pseudouridine synthase, RluC/RluD IF561_15455 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_15455 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_15455 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_15460 IPR036291 NAD(P)-binding domain superfamily IF561_15460 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IF561_15460 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IF561_15460 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IF561_15465 IPR023153 PSPTO4464-like domain superfamily IF561_15465 IPR006839 Ribosome-associated, YjgA IF561_15470 IPR002510 Metalloprotease TldD/PmbA IF561_15470 IPR035068 Metalloprotease TldD/PmbA, N-terminal IF561_15470 IPR036059 Metalloprotease TldD/PmbA superfamily IF561_15475 IPR006669 Magnesium transporter MgtE IF561_15475 IPR006667 SLC41 divalent cation transporters, integral membrane domain IF561_15475 IPR038048 Magnesium transporter MgtE, transmembrane domain IF561_15475 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IF561_15475 IPR006668 Magnesium transporter, MgtE intracellular domain IF561_15475 IPR000644 CBS domain IF561_15475 IPR038076 MgtE, N-terminal domain superfamily IF561_15480 IPR002114 Phosphotransferase system, HPr serine phosphorylation site IF561_15480 IPR035895 HPr-like superfamily IF561_15480 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site IF561_15480 IPR000032 Phosphocarrier protein HPr-like IF561_15485 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15485 IPR005337 RapZ-like family IF561_15490 IPR016152 Phosphotransferase/anion transporter IF561_15490 IPR002178 PTS EIIA type-2 domain IF561_15490 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN IF561_15495 IPR036567 Ribosome hibernation promotion factor-like IF561_15495 IPR003489 Ribosome hibernation promoting factor/RaiA IF561_15500 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily IF561_15500 IPR000394 RNA polymerase sigma factor 54 IF561_15500 IPR007046 RNA polymerase sigma factor 54, core-binding domain IF561_15500 IPR007634 RNA polymerase sigma factor 54, DNA-binding IF561_15505 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15505 IPR030921 LPS export ABC transporter, ATP-binding protein LptB IF561_15505 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal IF561_15505 IPR003593 AAA+ ATPase domain IF561_15505 IPR003439 ABC transporter-like IF561_15505 IPR017871 ABC transporter, conserved site IF561_15510 IPR014340 Lipopolysaccharide export system protein LptA IF561_15510 IPR005653 Organic solvent tolerance-like, N-terminal IF561_15520 IPR001347 Sugar isomerase (SIS) IF561_15520 IPR000644 CBS domain IF561_15520 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type IF561_15520 IPR035474 KpsF-like, SIS domain IF561_15525 IPR004481 Sodium/potassium/calcium exchanger IF561_15525 IPR004837 Sodium/calcium exchanger membrane region IF561_15530 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15530 IPR003439 ABC transporter-like IF561_15530 IPR017871 ABC transporter, conserved site IF561_15530 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl IF561_15530 IPR003593 AAA+ ATPase domain IF561_15535 IPR030802 ABC transporter permease MalE IF561_15535 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IF561_15540 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD IF561_15540 IPR003399 Mce/MlaD IF561_15545 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC IF561_15545 IPR042245 Tgt2/MlaC superfamily IF561_15555 IPR002634 BolA protein IF561_15555 IPR036065 BolA-like superfamily IF561_15560 IPR001986 Enolpyruvate transferase domain IF561_15560 IPR036968 Enolpyruvate transferase domain superfamily IF561_15560 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IF561_15560 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IF561_15565 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase IF561_15565 IPR002123 Phospholipid/glycerol acyltransferase IF561_15570 IPR006056 RidA family IF561_15570 IPR019897 RidA, conserved site IF561_15570 IPR035959 RutC-like superfamily IF561_15570 IPR006175 YjgF/YER057c/UK114 family IF561_15575 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal IF561_15575 IPR002801 Aspartate transcarbamylase regulatory subunit IF561_15575 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal IF561_15575 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily IF561_15575 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily IF561_15580 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IF561_15580 IPR002082 Aspartate carbamoyltransferase IF561_15580 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IF561_15580 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IF561_15580 IPR006130 Aspartate/ornithine carbamoyltransferase IF561_15590 IPR006130 Aspartate/ornithine carbamoyltransferase IF561_15590 IPR024904 Ornithine carbamoyltransferase IF561_15590 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IF561_15590 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IF561_15590 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IF561_15590 IPR002292 Ornithine/putrescine carbamoyltransferase IF561_15595 IPR003876 Arginine deiminase IF561_15600 IPR009671 Regulator of ribonuclease activity B domain IF561_15600 IPR036701 RraB-like superfamily IF561_15600 IPR016716 Regulator of ribonuclease activity B IF561_15610 IPR000182 GNAT domain IF561_15610 IPR016181 Acyl-CoA N-acyltransferase IF561_15620 IPR033705 Valyl tRNA synthetase, anticodon-binding domain IF561_15620 IPR002300 Aminoacyl-tRNA synthetase, class Ia IF561_15620 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_15620 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IF561_15620 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_15620 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IF561_15620 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm IF561_15620 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IF561_15620 IPR002303 Valine-tRNA ligase IF561_15620 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IF561_15620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_15625 IPR036768 DNA polymerase III subunit chi superfamily IF561_15625 IPR007459 DNA polymerase III chi subunit, HolC IF561_15630 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IF561_15630 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IF561_15630 IPR023042 Peptidase M17, leucine aminopeptidase IF561_15630 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal IF561_15635 IPR030922 LPS export ABC transporter permease LptF IF561_15635 IPR005495 Permease LptG/LptF-related IF561_15640 IPR030923 LPS export ABC transporter permease LptG IF561_15640 IPR005495 Permease LptG/LptF-related IF561_15650 IPR018723 Protein of unknown function DUF2254, membrane IF561_15655 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_15655 IPR036291 NAD(P)-binding domain superfamily IF561_15655 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_15665 IPR036573 Carbohydrate-binding module superfamily 5/12 IF561_15665 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IF561_15665 IPR002509 NodB homology domain IF561_15665 IPR003610 Carbohydrate-binding module family 5/12 IF561_15670 IPR013012 Phosphotransferase system, EIIB component, type 3 IF561_15670 IPR036095 PTS system IIB component-like superfamily IF561_15670 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_15675 IPR004796 Phosphotransferase system, cellobiose-type IIC component IF561_15675 IPR004501 Phosphotransferase system, EIIC component, type 3 IF561_15675 IPR003352 Phosphotransferase system, EIIC IF561_15680 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit IF561_15680 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily IF561_15685 IPR001088 Glycoside hydrolase, family 4 IF561_15685 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IF561_15685 IPR036291 NAD(P)-binding domain superfamily IF561_15685 IPR022616 Glycosyl hydrolase, family 4, C-terminal IF561_15685 IPR019802 Glycoside hydrolase, family 4, conserved site IF561_15690 IPR006879 Carbohydrate deacetylase YdjC-like IF561_15690 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria IF561_15690 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IF561_15695 IPR023588 Transcription regulator HTH, PurR IF561_15695 IPR028082 Periplasmic binding protein-like I IF561_15695 IPR001761 Periplasmic binding protein/LacI sugar binding domain IF561_15695 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_15695 IPR000843 LacI-type HTH domain IF561_15700 IPR011006 CheY-like superfamily IF561_15700 IPR003607 HD/PDEase domain IF561_15700 IPR037522 HD-GYP domain IF561_15700 IPR001789 Signal transduction response regulator, receiver domain IF561_15745 IPR015590 Aldehyde dehydrogenase domain IF561_15745 IPR010102 Succinate semialdehyde dehydrogenase IF561_15745 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_15745 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_15745 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_15745 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_15745 IPR016161 Aldehyde/histidinol dehydrogenase IF561_15775 IPR004090 Chemotaxis methyl-accepting receptor IF561_15775 IPR003660 HAMP domain IF561_15775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_15775 IPR033480 Single Cache domain 2 IF561_15775 IPR000727 Target SNARE coiled-coil homology domain IF561_15815 IPR023346 Lysozyme-like domain superfamily IF561_15815 IPR000189 Prokaryotic transglycosylase, active site IF561_15815 IPR008258 Transglycosylase SLT domain 1 IF561_15815 IPR024570 Murein transglycosylase-C, N-terminal IF561_15815 IPR023664 Murein transglycosylase-C IF561_15820 IPR007457 Fe(II) trafficking protein YggX IF561_15820 IPR036766 Fe(II) trafficking protein YggX superfamily IF561_15825 IPR015797 NUDIX hydrolase-like domain superfamily IF561_15825 IPR029119 MutY, C-terminal IF561_15825 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IF561_15825 IPR000445 Helix-hairpin-helix motif IF561_15825 IPR003265 HhH-GPD domain IF561_15825 IPR004035 Endonuclease III, iron-sulphur binding site IF561_15825 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IF561_15825 IPR004036 Endonuclease III-like, conserved site-2 IF561_15825 IPR011257 DNA glycosylase IF561_15825 IPR005760 A/G-specific adenine glycosylase MutY IF561_15830 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type IF561_15830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_15835 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site IF561_15835 IPR012327 D12 class N6 adenine-specific DNA methyltransferase IF561_15835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_15840 IPR012338 Beta-lactamase/transpeptidase-like IF561_15840 IPR015868 Glutaminase IF561_15845 IPR004559 Heme chaperone HemW-like IF561_15845 IPR010723 HemN, C-terminal IF561_15845 IPR034505 Anaerobic coproporphyrinogen-III oxidase IF561_15845 IPR007197 Radical SAM IF561_15845 IPR023404 Radical SAM, alpha/beta horseshoe IF561_15845 IPR006638 Elp3/MiaB/NifB IF561_15850 IPR020922 dITP/XTP pyrophosphatase IF561_15850 IPR002637 Ham1-like protein IF561_15850 IPR029001 Inosine triphosphate pyrophosphatase-like IF561_15860 IPR003746 Protein of unknown function DUF167 IF561_15860 IPR036591 YggU-like superfamily IF561_15860 IPR005228 Conserved hypothetical protein CHP00251 IF561_15865 IPR003425 CCB3/YggT IF561_15870 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_15870 IPR036291 NAD(P)-binding domain superfamily IF561_15870 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IF561_15870 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain IF561_15870 IPR000304 Pyrroline-5-carboxylate reductase IF561_15875 IPR011078 Pyridoxal phosphate homeostasis protein IF561_15875 IPR029066 PLP-binding barrel IF561_15875 IPR001608 Alanine racemase, N-terminal IF561_15880 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15880 IPR006321 Pilus retraction protein PilT IF561_15880 IPR001482 Type II/IV secretion system protein IF561_15880 IPR003593 AAA+ ATPase domain IF561_15885 IPR001482 Type II/IV secretion system protein IF561_15885 IPR006321 Pilus retraction protein PilT IF561_15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_15890 IPR005227 Putative pre-16S rRNA nuclease IF561_15890 IPR037027 YqgF/RNase H-like domain superfamily IF561_15890 IPR006641 YqgF/RNase H-like domain IF561_15890 IPR012337 Ribonuclease H-like superfamily IF561_15895 IPR003774 Protein of unknown function UPF0301 IF561_15900 IPR016185 Pre-ATP-grasp domain superfamily IF561_15900 IPR004218 Prokaryotic glutathione synthetase, ATP-binding IF561_15900 IPR006284 Glutathione synthetase, prokaryotic IF561_15900 IPR004215 Prokaryotic glutathione synthetase, N-terminal IF561_15900 IPR011761 ATP-grasp fold IF561_15900 IPR013815 ATP-grasp fold, subdomain 1 IF561_15905 IPR029028 Alpha/beta knot methyltransferases IF561_15905 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_15905 IPR006700 Ribosomal RNA small subunit methyltransferase E IF561_15905 IPR015947 PUA-like superfamily IF561_15910 IPR007346 Endonuclease I IF561_15915 IPR023483 Uncharacterised protein family SprT IF561_15915 IPR035240 SprT-like, zinc ribbon domain IF561_15915 IPR006640 SprT-like IF561_15925 IPR002133 S-adenosylmethionine synthetase IF561_15925 IPR022630 S-adenosylmethionine synthetase, C-terminal IF561_15925 IPR022629 S-adenosylmethionine synthetase, central domain IF561_15925 IPR022628 S-adenosylmethionine synthetase, N-terminal IF561_15925 IPR022636 S-adenosylmethionine synthetase superfamily IF561_15925 IPR022631 S-adenosylmethionine synthetase, conserved site IF561_15930 IPR005474 Transketolase, N-terminal IF561_15930 IPR033247 Transketolase family IF561_15930 IPR033248 Transketolase, C-terminal domain IF561_15930 IPR005475 Transketolase-like, pyrimidine-binding domain IF561_15930 IPR005478 Transketolase, bacterial-like IF561_15930 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IF561_15930 IPR029061 Thiamin diphosphate-binding fold IF561_15930 IPR020826 Transketolase binding site IF561_15935 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_15935 IPR036390 Winged helix DNA-binding domain superfamily IF561_15935 IPR005119 LysR, substrate-binding IF561_15935 IPR000847 Transcription regulator HTH, LysR IF561_15940 IPR010916 TonB box, conserved site IF561_15940 IPR039426 Vitamin B12 transporter BtuB-like IF561_15940 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_15940 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_15940 IPR010917 TonB-dependent receptor, conserved site IF561_15940 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_15940 IPR012910 TonB-dependent receptor, plug domain IF561_15945 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IF561_15945 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IF561_15945 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IF561_15945 IPR036291 NAD(P)-binding domain superfamily IF561_15945 IPR006422 D-erythrose-4-phosphate dehydrogenase IF561_15950 IPR015824 Phosphoglycerate kinase, N-terminal IF561_15950 IPR001576 Phosphoglycerate kinase IF561_15950 IPR015911 Phosphoglycerate kinase, conserved site IF561_15950 IPR036043 Phosphoglycerate kinase superfamily IF561_15955 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype IF561_15955 IPR000771 Fructose-bisphosphate aldolase, class-II IF561_15955 IPR013785 Aldolase-type TIM barrel IF561_15960 IPR010920 LSM domain superfamily IF561_15960 IPR006685 Mechanosensitive ion channel MscS IF561_15960 IPR011066 Mechanosensitive ion channel MscS, C-terminal IF561_15960 IPR006686 Mechanosensitive ion channel MscS, conserved site IF561_15960 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IF561_15960 IPR023408 Mechanosensitive ion channel MscS domain superfamily IF561_15960 IPR008910 Conserved TM helix IF561_15965 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily IF561_15965 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain IF561_15970 IPR004777 L-lysine exporter/arginine exporter IF561_15970 IPR001123 Amino acid exporter protein, LeuE-type IF561_15970 IPR023445 Arginine exporter protein ArgO, enterobacteria IF561_15975 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_15975 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria IF561_15975 IPR005119 LysR, substrate-binding IF561_15975 IPR017685 HTH-type transcriptional regulator ArgP IF561_15975 IPR000847 Transcription regulator HTH, LysR IF561_15975 IPR036390 Winged helix DNA-binding domain superfamily IF561_15980 IPR007497 Protein of unknown function DUF541 IF561_15985 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IF561_15985 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IF561_15985 IPR002912 ACT domain IF561_15985 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IF561_15985 IPR036291 NAD(P)-binding domain superfamily IF561_15985 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IF561_15990 IPR037171 NagB/RpiA transferase-like IF561_15990 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup IF561_15990 IPR004788 Ribose 5-phosphate isomerase, type A IF561_15995 IPR002698 5-formyltetrahydrofolate cyclo-ligase IF561_15995 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IF561_15995 IPR037171 NagB/RpiA transferase-like IF561_16005 IPR036192 Cell division protein ZapA-like superfamily IF561_16005 IPR007838 Cell division protein ZapA-like IF561_16005 IPR023771 Cell division protein ZapA, eubacteria IF561_16010 IPR011978 Uncharacterised protein family UPF0149 IF561_16010 IPR036255 YgfB-like superfamily IF561_16015 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_16015 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IF561_16015 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase IF561_16015 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IF561_16015 IPR002938 FAD-binding domain IF561_16020 IPR002938 FAD-binding domain IF561_16020 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_16020 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IF561_16020 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IF561_16035 IPR006222 Aminomethyltransferase, folate-binding domain IF561_16035 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal IF561_16035 IPR023758 tRNA-modifying protein YgfZ IF561_16035 IPR017703 YgfZ/GcvT conserved site IF561_16040 IPR005631 Flavinator of succinate dehydrogenase IF561_16040 IPR036714 Flavinator of succinate dehydrogenase superfamily IF561_16050 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IF561_16050 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IF561_16050 IPR005288 L-aspartate oxidase IF561_16050 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IF561_16050 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IF561_16050 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_16055 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16055 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_16055 IPR013325 RNA polymerase sigma factor, region 2 IF561_16055 IPR014286 RNA polymerase sigma-70 RpoE type IF561_16055 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IF561_16055 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IF561_16055 IPR014284 RNA polymerase sigma-70 like domain IF561_16055 IPR007627 RNA polymerase sigma-70 region 2 IF561_16055 IPR039425 RNA polymerase sigma-70 like IF561_16060 IPR005572 Anti sigma-E protein RseA, N-terminal IF561_16060 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily IF561_16060 IPR026279 Sigma-E factor negative regulatory protein RseA IF561_16060 IPR005573 Anti sigma-E protein RseA, C-terminal IF561_16065 IPR005588 MucB/RseB IF561_16065 IPR033434 MucB/RseB, N-terminal IF561_16065 IPR038484 MucB/RseB, C-terminal domain superfamily IF561_16065 IPR033436 MucB/RseB, C-terminal IF561_16070 IPR007359 Positive regulator of sigma(E), RseC/MucC IF561_16070 IPR026268 Protein RseC IF561_16075 IPR035647 EF-G domain III/V-like IF561_16075 IPR006297 Elongation factor 4 IF561_16075 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_16075 IPR031157 Tr-type G domain, conserved site IF561_16075 IPR038363 LepA, C-terminal domain superfamily IF561_16075 IPR000640 Elongation factor EFG, domain V-like IF561_16075 IPR013842 GTP-binding protein LepA, C-terminal IF561_16075 IPR009000 Translation protein, beta-barrel domain superfamily IF561_16075 IPR000795 Transcription factor, GTP-binding domain IF561_16075 IPR005225 Small GTP-binding protein domain IF561_16075 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16075 IPR035654 Elongation factor 4, domain IV IF561_16080 IPR019758 Peptidase S26A, signal peptidase I, conserved site IF561_16080 IPR036286 LexA/Signal peptidase-like superfamily IF561_16080 IPR019533 Peptidase S26 IF561_16080 IPR019756 Peptidase S26A, signal peptidase I, serine active site IF561_16080 IPR019757 Peptidase S26A, signal peptidase I, lysine active site IF561_16080 IPR000223 Peptidase S26A, signal peptidase I IF561_16085 IPR036389 Ribonuclease III, endonuclease domain superfamily IF561_16085 IPR000999 Ribonuclease III domain IF561_16085 IPR014720 Double-stranded RNA-binding domain IF561_16085 IPR011907 Ribonuclease III IF561_16090 IPR005225 Small GTP-binding protein domain IF561_16090 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16090 IPR009019 K homology domain superfamily, prokaryotic type IF561_16090 IPR030388 Era-type guanine nucleotide-binding (G) domain IF561_16090 IPR005662 GTP-binding protein Era IF561_16090 IPR006073 GTP binding domain IF561_16090 IPR004044 K Homology domain, type 2 IF561_16090 IPR015946 K homology domain-like, alpha/beta IF561_16095 IPR022572 DNA replication/recombination mediator RecO, N-terminal IF561_16095 IPR003717 Recombination protein O, RecO IF561_16095 IPR037278 ARFGAP/RecO-like zinc finger IF561_16095 IPR012340 Nucleic acid-binding, OB-fold IF561_16100 IPR013785 Aldolase-type TIM barrel IF561_16100 IPR036130 Pyridoxine 5'-phosphate synthase IF561_16100 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ IF561_16105 IPR008278 4'-phosphopantetheinyl transferase domain IF561_16105 IPR037143 4'-phosphopantetheinyl transferase domain superfamily IF561_16105 IPR002582 Holo-[acyl carrier protein] synthase IF561_16105 IPR004568 Phosphopantetheine-protein transferase domain IF561_16110 IPR019247 Histidine kinase BarA, N-terminal IF561_16110 IPR001789 Signal transduction response regulator, receiver domain IF561_16110 IPR003594 Histidine kinase/HSP90-like ATPase IF561_16110 IPR003660 HAMP domain IF561_16110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_16110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_16110 IPR011006 CheY-like superfamily IF561_16110 IPR036641 HPT domain superfamily IF561_16110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_16110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_16110 IPR005467 Histidine kinase domain IF561_16110 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_16115 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD IF561_16115 IPR030391 RNA methyltransferase TrmA, conserved site IF561_16115 IPR030390 RNA methyltransferase TrmA, active site IF561_16115 IPR010280 (Uracil-5)-methyltransferase family IF561_16115 IPR002792 TRAM domain IF561_16115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_16115 IPR012340 Nucleic acid-binding, OB-fold IF561_16120 IPR012676 TGS-like IF561_16120 IPR033655 RelA, TGS domain IF561_16120 IPR007685 RelA/SpoT IF561_16120 IPR003607 HD/PDEase domain IF561_16120 IPR012675 Beta-grasp domain superfamily IF561_16120 IPR002912 ACT domain IF561_16120 IPR004095 TGS IF561_16120 IPR004811 RelA/SpoT family IF561_16125 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IF561_16125 IPR011551 NTP pyrophosphohydrolase MazG IF561_16130 IPR033828 CTP synthase GATase domain IF561_16130 IPR017456 CTP synthase, N-terminal IF561_16130 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16130 IPR004468 CTP synthase IF561_16130 IPR017926 Glutamine amidotransferase IF561_16130 IPR029062 Class I glutamine amidotransferase-like IF561_16135 IPR020811 Enolase, N-terminal IF561_16135 IPR020809 Enolase, conserved site IF561_16135 IPR020810 Enolase, C-terminal TIM barrel domain IF561_16135 IPR029017 Enolase-like, N-terminal IF561_16135 IPR036849 Enolase-like, C-terminal domain superfamily IF561_16135 IPR000941 Enolase IF561_16140 IPR007060 Septum formation initiator FtsL/DivIC IF561_16140 IPR023081 Cell division protein FtsB IF561_16145 IPR029044 Nucleotide-diphospho-sugar transferases IF561_16145 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site IF561_16145 IPR034683 Cytidylyltransferase IspD/TarI IF561_16145 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IF561_16150 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IF561_16150 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily IF561_16150 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site IF561_16155 IPR001656 Pseudouridine synthase, TruD IF561_16155 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_16155 IPR011760 Pseudouridine synthase, TruD, insertion domain IF561_16155 IPR042214 Pseudouridine synthase, TruD, catalytic domain IF561_16155 IPR020119 Pseudouridine synthase TruD, conserved site IF561_16160 IPR030048 Survival protein SurE IF561_16160 IPR002828 Survival protein SurE-like phosphatase/nucleotidase IF561_16160 IPR036523 SurE-like phosphatase/nucleotidase superfamily IF561_16165 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase IF561_16165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_16170 IPR016047 Peptidase M23 IF561_16170 IPR018392 LysM domain IF561_16170 IPR036779 LysM domain superfamily IF561_16170 IPR011055 Duplicated hybrid motif IF561_16175 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16175 IPR012761 RNA polymerase sigma factor RpoS IF561_16175 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_16175 IPR013325 RNA polymerase sigma factor, region 2 IF561_16175 IPR007630 RNA polymerase sigma-70 region 4 IF561_16175 IPR007624 RNA polymerase sigma-70 region 3 IF561_16175 IPR007627 RNA polymerase sigma-70 region 2 IF561_16175 IPR009042 RNA polymerase sigma-70 region 1.2 IF561_16175 IPR000943 RNA polymerase sigma-70 IF561_16175 IPR014284 RNA polymerase sigma-70 like domain IF561_16180 IPR007860 DNA mismatch repair protein MutS, connector domain IF561_16180 IPR000432 DNA mismatch repair protein MutS, C-terminal IF561_16180 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16180 IPR036678 MutS, connector domain superfamily IF561_16180 IPR036187 DNA mismatch repair protein MutS, core domain superfamily IF561_16180 IPR016151 DNA mismatch repair protein MutS, N-terminal IF561_16180 IPR007696 DNA mismatch repair protein MutS, core IF561_16180 IPR007861 DNA mismatch repair protein MutS, clamp IF561_16180 IPR005748 DNA mismatch repair protein MutS IF561_16180 IPR007695 DNA mismatch repair protein MutS-like, N-terminal IF561_16180 IPR017261 DNA mismatch repair protein MutS/MSH IF561_16185 IPR036653 CinA-like, C-terminal IF561_16185 IPR008136 CinA, C-terminal IF561_16235 IPR029028 Alpha/beta knot methyltransferases IF561_16235 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IF561_16235 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY IF561_16240 IPR002510 Metalloprotease TldD/PmbA IF561_16240 IPR036059 Metalloprotease TldD/PmbA superfamily IF561_16240 IPR025502 TldD IF561_16240 IPR035068 Metalloprotease TldD/PmbA, N-terminal IF561_16245 IPR036059 Metalloprotease TldD/PmbA superfamily IF561_16245 IPR035068 Metalloprotease TldD/PmbA, N-terminal IF561_16245 IPR002510 Metalloprotease TldD/PmbA IF561_16250 IPR029056 Ribokinase-like IF561_16250 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IF561_16250 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase IF561_16255 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16255 IPR003593 AAA+ ATPase domain IF561_16255 IPR003439 ABC transporter-like IF561_16255 IPR017871 ABC transporter, conserved site IF561_16260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_16260 IPR035906 MetI-like superfamily IF561_16265 IPR027939 NMT1/THI5 family IF561_16265 IPR015168 SsuA/THI5-like IF561_16270 IPR016084 Haem oxygenase-like, multi-helical IF561_16270 IPR004305 Thiaminase-2/PQQC IF561_16270 IPR027574 Thiaminase II IF561_16275 IPR000417 Hydroxyethylthiazole kinase IF561_16275 IPR029056 Ribokinase-like IF561_16280 IPR013785 Aldolase-type TIM barrel IF561_16280 IPR036206 Thiamin phosphate synthase superfamily IF561_16280 IPR022998 Thiamine phosphate synthase/TenI IF561_16280 IPR034291 Thiamine phosphate synthase IF561_16290 IPR006657 Molybdopterin dinucleotide-binding domain IF561_16290 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_16290 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase IF561_16290 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain IF561_16290 IPR041460 Molybdopterin oxidoreductase, N-terminal IF561_16290 IPR006656 Molybdopterin oxidoreductase IF561_16290 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IF561_16290 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_16290 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IF561_16295 IPR038266 NapC/NirT cytochrome c superfamily IF561_16295 IPR036280 Multiheme cytochrome superfamily IF561_16295 IPR005126 NapC/NirT cytochrome c, N-terminal IF561_16295 IPR011031 Multihaem cytochrome IF561_16295 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK IF561_16305 IPR036291 NAD(P)-binding domain superfamily IF561_16305 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_16305 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_16320 IPR016181 Acyl-CoA N-acyltransferase IF561_16320 IPR027455 Spermine/spermidine acetyltransferase, N-terminal IF561_16320 IPR000182 GNAT domain IF561_16340 IPR000524 Transcription regulator HTH, GntR IF561_16340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_16340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_16340 IPR015424 Pyridoxal phosphate-dependent transferase IF561_16340 IPR004839 Aminotransferase, class I/classII IF561_16340 IPR036390 Winged helix DNA-binding domain superfamily IF561_16340 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16345 IPR036129 Glycerate kinase superfamily IF561_16345 IPR004381 Glycerate kinase IF561_16345 IPR018193 Glycerate kinase, flavodoxin-like fold IF561_16345 IPR018197 Glycerate kinase, restriction-enzyme-like fold IF561_16350 IPR003474 Gluconate transporter IF561_16355 IPR041522 CdaR, GGDEF-like domain IF561_16355 IPR008599 Putative sugar diacid recognition IF561_16355 IPR042070 PucR C-terminal helix-turn-helix domain superfamily IF561_16355 IPR025736 PucR C-terminal helix-turn-helix domain IF561_16380 IPR023214 HAD superfamily IF561_16380 IPR006439 HAD hydrolase, subfamily IA IF561_16380 IPR036412 HAD-like superfamily IF561_16380 IPR041492 Haloacid dehalogenase-like hydrolase IF561_16380 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_16395 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16395 IPR000847 Transcription regulator HTH, LysR IF561_16395 IPR005119 LysR, substrate-binding IF561_16395 IPR036390 Winged helix DNA-binding domain superfamily IF561_16405 IPR005119 LysR, substrate-binding IF561_16405 IPR000847 Transcription regulator HTH, LysR IF561_16405 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16405 IPR036390 Winged helix DNA-binding domain superfamily IF561_16410 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_16410 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_16410 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_16415 IPR002589 Macro domain IF561_16420 IPR008928 Six-hairpin glycosidase superfamily IF561_16420 IPR012341 Six-hairpin glycosidase-like superfamily IF561_16420 IPR001661 Glycoside hydrolase, family 37 IF561_16430 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D IF561_16430 IPR001279 Metallo-beta-lactamase IF561_16430 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IF561_16440 IPR036259 MFS transporter superfamily IF561_16440 IPR004638 Drug resistance transporter EmrB-like IF561_16440 IPR020846 Major facilitator superfamily domain IF561_16440 IPR011701 Major facilitator superfamily IF561_16445 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_16450 IPR005618 Outer membrane protein, OmpW IF561_16450 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_16455 IPR001646 Pentapeptide repeat IF561_16470 IPR041029 N-acetylglucosamine binding protein A domain 2 IF561_16470 IPR014756 Immunoglobulin E-set IF561_16470 IPR004302 Cellulose/chitin-binding protein, N-terminal IF561_16475 IPR036390 Winged helix DNA-binding domain superfamily IF561_16475 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_16475 IPR019888 Transcription regulator AsnC-type IF561_16475 IPR011008 Dimeric alpha-beta barrel IF561_16475 IPR000485 AsnC-type HTH domain IF561_16475 IPR011991 ArsR-like helix-turn-helix domain IF561_16475 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16475 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_16480 IPR001123 Amino acid exporter protein, LeuE-type IF561_16485 IPR039374 Siderophore-interacting protein IF561_16485 IPR017938 Riboflavin synthase-like beta-barrel IF561_16485 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_16485 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_16485 IPR013113 FAD-binding 9, siderophore-interacting IF561_16485 IPR007037 Siderophore-interacting protein, C-terminal domain IF561_16490 IPR027946 Oligogalacturonate lyase domain IF561_16490 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IF561_16495 IPR018212 Sodium/solute symporter, conserved site IF561_16495 IPR001734 Sodium/solute symporter IF561_16495 IPR038377 Sodium/glucose symporter superfamily IF561_16500 IPR011050 Pectin lyase fold/virulence factor IF561_16500 IPR012334 Pectin lyase fold IF561_16500 IPR039448 Right handed beta helix domain IF561_16515 IPR013785 Aldolase-type TIM barrel IF561_16515 IPR000887 KDPG/KHG aldolase IF561_16515 IPR031337 KDPG/KHG aldolase, active site 1 IF561_16515 IPR031338 KDPG/KHG aldolase, active site 2 IF561_16520 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_16520 IPR011611 Carbohydrate kinase PfkB IF561_16520 IPR029056 Ribokinase-like IF561_16535 IPR011051 RmlC-like cupin domain superfamily IF561_16535 IPR014710 RmlC-like jelly roll fold IF561_16535 IPR025499 Pectin degradation protein KdgF IF561_16535 IPR013096 Cupin 2, conserved barrel IF561_16540 IPR019629 Uncharacterised protein family HI1736/YgjV IF561_16540 IPR026267 Inner membrane protein YgjV IF561_16545 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase IF561_16545 IPR036291 NAD(P)-binding domain superfamily IF561_16545 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_16545 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_16550 IPR036390 Winged helix DNA-binding domain superfamily IF561_16550 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16550 IPR014757 Transcription regulator IclR, C-terminal IF561_16550 IPR029016 GAF-like domain superfamily IF561_16550 IPR011991 ArsR-like helix-turn-helix domain IF561_16550 IPR005471 Transcription regulator IclR, N-terminal IF561_16565 IPR005119 LysR, substrate-binding IF561_16565 IPR000847 Transcription regulator HTH, LysR IF561_16565 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16565 IPR036390 Winged helix DNA-binding domain superfamily IF561_16570 IPR001447 Arylamine N-acetyltransferase IF561_16570 IPR038765 Papain-like cysteine peptidase superfamily IF561_16575 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IF561_16575 IPR013154 Alcohol dehydrogenase, N-terminal IF561_16575 IPR011032 GroES-like superfamily IF561_16575 IPR036291 NAD(P)-binding domain superfamily IF561_16575 IPR014183 Alcohol dehydrogenase class III IF561_16575 IPR020843 Polyketide synthase, enoylreductase domain IF561_16575 IPR013149 Alcohol dehydrogenase, C-terminal IF561_16580 IPR014186 S-formylglutathione hydrolase IF561_16580 IPR000801 Putative esterase IF561_16580 IPR029058 Alpha/Beta hydrolase fold IF561_16590 IPR003660 HAMP domain IF561_16590 IPR029787 Nucleotide cyclase IF561_16590 IPR033417 Periplasmic sensor domain CHASE8 IF561_16590 IPR000160 GGDEF domain IF561_16600 IPR023214 HAD superfamily IF561_16600 IPR000150 Cof family IF561_16600 IPR036412 HAD-like superfamily IF561_16600 IPR006379 HAD-superfamily hydrolase, subfamily IIB IF561_16605 IPR000847 Transcription regulator HTH, LysR IF561_16605 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16605 IPR005119 LysR, substrate-binding IF561_16605 IPR036390 Winged helix DNA-binding domain superfamily IF561_16620 IPR020103 Pseudouridine synthase, catalytic domain superfamily IF561_16620 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IF561_16620 IPR006145 Pseudouridine synthase, RsuA/RluA IF561_16620 IPR006225 Pseudouridine synthase, RluC/RluD IF561_16625 IPR002528 Multi antimicrobial extrusion protein IF561_16630 IPR001633 EAL domain IF561_16630 IPR035919 EAL domain superfamily IF561_16630 IPR000160 GGDEF domain IF561_16630 IPR003660 HAMP domain IF561_16630 IPR029787 Nucleotide cyclase IF561_16640 IPR011051 RmlC-like cupin domain superfamily IF561_16640 IPR014710 RmlC-like jelly roll fold IF561_16640 IPR009664 Pyrimidine/purine nucleoside phosphorylase IF561_16650 IPR002126 Cadherin-like IF561_16650 IPR003610 Carbohydrate-binding module family 5/12 IF561_16650 IPR036573 Carbohydrate-binding module superfamily 5/12 IF561_16650 IPR011583 Chitinase II IF561_16650 IPR029070 Chitinase insertion domain superfamily IF561_16650 IPR013540 Chitinase A N-terminal IF561_16650 IPR001223 Glycoside hydrolase family 18, catalytic domain IF561_16650 IPR001579 Glycoside hydrolase, chitinase active site IF561_16650 IPR017853 Glycoside hydrolase superfamily IF561_16650 IPR013783 Immunoglobulin-like fold IF561_16650 IPR014756 Immunoglobulin E-set IF561_16650 IPR022409 PKD/Chitinase domain IF561_16670 IPR004680 Citrate transporter-like domain IF561_16670 IPR004672 Na+/H+ antiporter NhaD IF561_16680 IPR003740 Uncharacterised membrane protein YitT IF561_16690 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IF561_16690 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IF561_16690 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IF561_16690 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IF561_16690 IPR023546 Methylated-DNA--protein-cysteine methyltransferase IF561_16690 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IF561_16690 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16695 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IF561_16695 IPR003265 HhH-GPD domain IF561_16695 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily IF561_16695 IPR000035 Alkylbase DNA glycosidase, conserved site IF561_16695 IPR011257 DNA glycosylase IF561_16695 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal IF561_16705 IPR032808 DoxX family IF561_16710 IPR011051 RmlC-like cupin domain superfamily IF561_16710 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain IF561_16710 IPR014710 RmlC-like jelly roll fold IF561_16710 IPR003829 Pirin, N-terminal domain IF561_16710 IPR012093 Pirin IF561_16715 IPR000847 Transcription regulator HTH, LysR IF561_16715 IPR005119 LysR, substrate-binding IF561_16715 IPR020890 Transcription regulator HTH, HdfR IF561_16715 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16715 IPR036390 Winged helix DNA-binding domain superfamily IF561_16730 IPR037171 NagB/RpiA transferase-like IF561_16730 IPR018321 Glucosamine-6-phosphate isomerase, conserved site IF561_16730 IPR004547 Glucosamine-6-phosphate isomerase IF561_16730 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase IF561_16740 IPR004445 Sodium/glutamate symport carrier protein GltS IF561_16745 IPR015424 Pyridoxal phosphate-dependent transferase IF561_16745 IPR000524 Transcription regulator HTH, GntR IF561_16745 IPR036390 Winged helix DNA-binding domain superfamily IF561_16745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_16745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_16745 IPR004839 Aminotransferase, class I/classII IF561_16745 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16750 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16750 IPR003593 AAA+ ATPase domain IF561_16750 IPR003439 ABC transporter-like IF561_16760 IPR004445 Sodium/glutamate symport carrier protein GltS IF561_16765 IPR001451 Hexapeptide repeat IF561_16765 IPR018357 Hexapeptide transferase, conserved site IF561_16765 IPR011004 Trimeric LpxA-like superfamily IF561_16780 IPR004090 Chemotaxis methyl-accepting receptor IF561_16780 IPR003660 HAMP domain IF561_16780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_16780 IPR000727 Target SNARE coiled-coil homology domain IF561_16780 IPR033480 Single Cache domain 2 IF561_16785 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site IF561_16785 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain IF561_16785 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase IF561_16785 IPR029000 Cyclophilin-like domain superfamily IF561_16795 IPR001789 Signal transduction response regulator, receiver domain IF561_16795 IPR007492 LytTR DNA-binding domain IF561_16795 IPR011006 CheY-like superfamily IF561_16800 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region IF561_16800 IPR010559 Signal transduction histidine kinase, internal region IF561_16800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_16800 IPR003594 Histidine kinase/HSP90-like ATPase IF561_16800 IPR003018 GAF domain IF561_16820 IPR015854 ABC transporter, lipoprotein release, LolD IF561_16820 IPR003439 ABC transporter-like IF561_16820 IPR017871 ABC transporter, conserved site IF561_16820 IPR003593 AAA+ ATPase domain IF561_16820 IPR011924 Lipoprotein releasing system, ATP-binding protein IF561_16820 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16830 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IF561_16830 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB IF561_16830 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IF561_16835 IPR017856 Integrase-like, N-terminal IF561_16835 IPR002876 Transcriptional regulator TACO1-like IF561_16835 IPR026564 Transcriptional regulator TACO1-like, domain 3 IF561_16835 IPR029072 YebC-like IF561_16845 IPR011006 CheY-like superfamily IF561_16845 IPR003660 HAMP domain IF561_16845 IPR036641 HPT domain superfamily IF561_16845 IPR001789 Signal transduction response regulator, receiver domain IF561_16845 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_16845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_16845 IPR033414 Periplasmic sensor domain IF561_16845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_16845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_16845 IPR005467 Histidine kinase domain IF561_16845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_16845 IPR003594 Histidine kinase/HSP90-like ATPase IF561_16855 IPR000926 GTP cyclohydrolase II, RibA IF561_16855 IPR036144 RibA-like superfamily IF561_16855 IPR037238 YbiA-like superfamily IF561_16855 IPR032677 GTP cyclohydrolase II IF561_16855 IPR012816 NADAR IF561_16865 IPR003439 ABC transporter-like IF561_16865 IPR003593 AAA+ ATPase domain IF561_16865 IPR017871 ABC transporter, conserved site IF561_16865 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_16865 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16870 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_16870 IPR003593 AAA+ ATPase domain IF561_16870 IPR003439 ABC transporter-like IF561_16870 IPR017871 ABC transporter, conserved site IF561_16870 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16885 IPR025669 AAA domain IF561_16885 IPR041250 ParA helix turn helix domain IF561_16885 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16890 IPR004437 ParB/RepB/Spo0J partition protein IF561_16890 IPR003115 ParB/Sulfiredoxin IF561_16890 IPR036086 ParB/Sulfiredoxin superfamily IF561_16890 IPR014884 ParB protein family, C-terminal IF561_16895 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA IF561_16895 IPR016181 Acyl-CoA N-acyltransferase IF561_16895 IPR032672 TmcA/NAT10/Kre33 IF561_16895 IPR007807 Helicase domain IF561_16895 IPR000182 GNAT domain IF561_16895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16905 IPR011004 Trimeric LpxA-like superfamily IF561_16905 IPR018357 Hexapeptide transferase, conserved site IF561_16905 IPR001451 Hexapeptide repeat IF561_16910 IPR036390 Winged helix DNA-binding domain superfamily IF561_16910 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16910 IPR000847 Transcription regulator HTH, LysR IF561_16910 IPR005119 LysR, substrate-binding IF561_16915 IPR005320 Peptidase S51 IF561_16915 IPR029062 Class I glutamine amidotransferase-like IF561_16920 IPR001897 Porin, gammaproteobacterial IF561_16920 IPR023614 Porin domain superfamily IF561_16920 IPR001702 Porin, Gram-negative type IF561_16920 IPR033900 Porin domain, Gram-negative type IF561_16925 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_16925 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_16925 IPR036878 Glucose permease domain IIB IF561_16925 IPR003352 Phosphotransferase system, EIIC IF561_16925 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_16930 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ IF561_16930 IPR005486 Glucokinase regulatory protein, conserved site IF561_16930 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein IF561_16930 IPR001347 Sugar isomerase (SIS) IF561_16935 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_16935 IPR022821 Transcription regulator HTH, MurR IF561_16935 IPR001347 Sugar isomerase (SIS) IF561_16935 IPR035472 RpiR-like, SIS domain IF561_16935 IPR000281 Helix-turn-helix protein RpiR IF561_16935 IPR009057 Homeobox-like domain superfamily IF561_16940 IPR000834 Peptidase M14, carboxypeptidase A IF561_16945 IPR030678 Peptide/nickel binding protein, MppA-type IF561_16945 IPR039424 Solute-binding protein family 5 IF561_16945 IPR023765 Solute-binding protein family 5, conserved site IF561_16945 IPR000914 Solute-binding protein family 5 domain IF561_16950 IPR029039 Flavoprotein-like superfamily IF561_16950 IPR008254 Flavodoxin/nitric oxide synthase IF561_16950 IPR005025 NADPH-dependent FMN reductase-like IF561_16950 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic IF561_16950 IPR010089 Flavoprotein WrbA-like IF561_16960 IPR003593 AAA+ ATPase domain IF561_16960 IPR011527 ABC transporter type 1, transmembrane domain IF561_16960 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_16960 IPR003439 ABC transporter-like IF561_16960 IPR017871 ABC transporter, conserved site IF561_16960 IPR039395 Peptidase C39-like A IF561_16960 IPR005074 Peptidase C39, bacteriocin processing IF561_16960 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16960 IPR010132 ATPase, type I secretion system, HlyB IF561_16960 IPR039421 Type I protein exporter IF561_16975 IPR010129 Type I secretion membrane fusion protein, HlyD family IF561_16975 IPR006144 Secretion protein HlyD, conserved site IF561_16980 IPR009057 Homeobox-like domain superfamily IF561_16980 IPR011006 CheY-like superfamily IF561_16980 IPR003593 AAA+ ATPase domain IF561_16980 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_16980 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_16980 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_16980 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_16980 IPR025944 Sigma-54 interaction domain, conserved site IF561_16980 IPR002197 DNA binding HTH domain, Fis-type IF561_16980 IPR001789 Signal transduction response regulator, receiver domain IF561_16985 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) IF561_16985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_16985 IPR033479 Double Cache domain 1 IF561_16985 IPR003594 Histidine kinase/HSP90-like ATPase IF561_16985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_16985 IPR005467 Histidine kinase domain IF561_16985 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_16985 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_16985 IPR029151 Periplasmic sensor-like domain superfamily IF561_16990 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site IF561_16990 IPR012349 FMN-binding split barrel IF561_16990 IPR000659 Pyridoxamine 5'-phosphate oxidase IF561_16990 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal IF561_16990 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative IF561_17000 IPR020449 Transcription regulator HTH, AraC- type IF561_17000 IPR011051 RmlC-like cupin domain superfamily IF561_17000 IPR018062 HTH domain AraC-type, conserved site IF561_17000 IPR014710 RmlC-like jelly roll fold IF561_17000 IPR009057 Homeobox-like domain superfamily IF561_17000 IPR018060 DNA binding HTH domain, AraC-type IF561_17005 IPR010985 Ribbon-helix-helix IF561_17005 IPR002872 Proline dehydrogenase domain IF561_17005 IPR024082 Proline dehydrogenase PutA, domain II IF561_17005 IPR024089 Proline dehydrogenase PutA, domain I/II IF561_17005 IPR024090 Proline dehydrogenase PutA, domain I IF561_17005 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain IF561_17005 IPR029041 FAD-linked oxidoreductase-like IF561_17005 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 IF561_17005 IPR025703 Bifunctional protein PutA IF561_17005 IPR015590 Aldehyde dehydrogenase domain IF561_17005 IPR013321 Arc-type ribbon-helix-helix IF561_17005 IPR016161 Aldehyde/histidinol dehydrogenase IF561_17005 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_17005 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_17005 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_17005 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_17015 IPR011851 Sodium/proline symporter IF561_17015 IPR001734 Sodium/solute symporter IF561_17015 IPR038377 Sodium/glucose symporter superfamily IF561_17015 IPR018212 Sodium/solute symporter, conserved site IF561_17050 IPR011991 ArsR-like helix-turn-helix domain IF561_17050 IPR011008 Dimeric alpha-beta barrel IF561_17050 IPR000485 AsnC-type HTH domain IF561_17050 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17050 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_17050 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_17050 IPR019888 Transcription regulator AsnC-type IF561_17050 IPR036390 Winged helix DNA-binding domain superfamily IF561_17060 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17060 IPR003593 AAA+ ATPase domain IF561_17060 IPR011527 ABC transporter type 1, transmembrane domain IF561_17060 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_17060 IPR003439 ABC transporter-like IF561_17060 IPR017871 ABC transporter, conserved site IF561_17060 IPR039421 Type I protein exporter IF561_17070 IPR018060 DNA binding HTH domain, AraC-type IF561_17070 IPR009057 Homeobox-like domain superfamily IF561_17070 IPR009594 Transcription regulator HTH, AraC, N-terminal IF561_17085 IPR011545 DEAD/DEAH box helicase domain IF561_17085 IPR028622 ATP-dependent RNA helicase RhlE IF561_17085 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_17085 IPR001650 Helicase, C-terminal IF561_17085 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17085 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_17085 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_17090 IPR005302 Molybdenum cofactor sulfurase, C-terminal IF561_17090 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_17090 IPR005163 3-alpha domain IF561_17105 IPR036291 NAD(P)-binding domain superfamily IF561_17105 IPR019802 Glycoside hydrolase, family 4, conserved site IF561_17105 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IF561_17105 IPR022616 Glycosyl hydrolase, family 4, C-terminal IF561_17105 IPR001088 Glycoside hydrolase, family 4 IF561_17110 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17110 IPR005119 LysR, substrate-binding IF561_17110 IPR036390 Winged helix DNA-binding domain superfamily IF561_17110 IPR011781 D-serine deaminase transcriptional activator IF561_17110 IPR000847 Transcription regulator HTH, LysR IF561_17115 IPR004090 Chemotaxis methyl-accepting receptor IF561_17115 IPR033479 Double Cache domain 1 IF561_17115 IPR003660 HAMP domain IF561_17115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_17115 IPR029151 Periplasmic sensor-like domain superfamily IF561_17115 IPR000727 Target SNARE coiled-coil homology domain IF561_17125 IPR013325 RNA polymerase sigma factor, region 2 IF561_17125 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IF561_17125 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_17125 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17125 IPR007627 RNA polymerase sigma-70 region 2 IF561_17125 IPR039425 RNA polymerase sigma-70 like IF561_17125 IPR014284 RNA polymerase sigma-70 like domain IF561_17130 IPR029062 Class I glutamine amidotransferase-like IF561_17130 IPR002818 DJ-1/PfpI IF561_17130 IPR009057 Homeobox-like domain superfamily IF561_17130 IPR018060 DNA binding HTH domain, AraC-type IF561_17130 IPR018062 HTH domain AraC-type, conserved site IF561_17135 IPR036390 Winged helix DNA-binding domain superfamily IF561_17135 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17135 IPR005119 LysR, substrate-binding IF561_17135 IPR000847 Transcription regulator HTH, LysR IF561_17150 IPR012336 Thioredoxin-like fold IF561_17150 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IF561_17150 IPR036249 Thioredoxin-like superfamily IF561_17150 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_17150 IPR023753 FAD/NAD(P)-binding domain IF561_17150 IPR012081 Alkyl hydroperoxide reductase subunit F IF561_17150 IPR002109 Glutaredoxin IF561_17155 IPR024706 Peroxiredoxin, AhpC-type IF561_17155 IPR019479 Peroxiredoxin, C-terminal IF561_17155 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IF561_17155 IPR017559 Alkyl hydroperoxide reductase subunit C IF561_17155 IPR036249 Thioredoxin-like superfamily IF561_17155 IPR013766 Thioredoxin domain IF561_17160 IPR036390 Winged helix DNA-binding domain superfamily IF561_17160 IPR000835 MarR-type HTH domain IF561_17160 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17165 IPR015946 K homology domain-like, alpha/beta IF561_17165 IPR019953 Organic hydroperoxide resistance protein famiy IF561_17165 IPR003718 OsmC/Ohr family IF561_17165 IPR036102 OsmC/Ohr superfamily IF561_17185 IPR001173 Glycosyltransferase 2-like IF561_17185 IPR029044 Nucleotide-diphospho-sugar transferases IF561_17195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_17195 IPR013216 Methyltransferase type 11 IF561_17195 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IF561_17205 IPR001539 Peptidase U32 IF561_17205 IPR009000 Translation protein, beta-barrel domain superfamily IF561_17215 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IF561_17215 IPR011299 PTS system glucose-specific IIBC component IF561_17215 IPR036878 Glucose permease domain IIB IF561_17215 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_17215 IPR003352 Phosphotransferase system, EIIC IF561_17215 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_17215 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_17220 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_17220 IPR016032 Signal transduction response regulator, C-terminal effector IF561_17220 IPR001789 Signal transduction response regulator, receiver domain IF561_17220 IPR039420 Transcriptional regulatory protein WalR-like IF561_17220 IPR011006 CheY-like superfamily IF561_17220 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_17225 IPR005467 Histidine kinase domain IF561_17225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_17225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_17225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_17225 IPR003660 HAMP domain IF561_17225 IPR013727 Two-component sensor kinase, N-terminal IF561_17225 IPR003594 Histidine kinase/HSP90-like ATPase IF561_17230 IPR006059 Bacterial extracellular solute-binding protein IF561_17235 IPR029066 PLP-binding barrel IF561_17235 IPR002433 Ornithine decarboxylase IF561_17235 IPR000183 Ornithine/DAP/Arg decarboxylase IF561_17235 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IF561_17235 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IF561_17235 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_17235 IPR022272 Lipocalin family conserved site IF561_17240 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal IF561_17240 IPR022770 Ferric iron reductase FhuF domain IF561_17240 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like IF561_17250 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like IF561_17250 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal IF561_17250 IPR022770 Ferric iron reductase FhuF domain IF561_17255 IPR009049 Argininosuccinate lyase IF561_17255 IPR011761 ATP-grasp fold IF561_17255 IPR003806 ATP-grasp fold, PylC-type IF561_17255 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IF561_17255 IPR024083 Fumarase/histidase, N-terminal IF561_17255 IPR000362 Fumarate lyase family IF561_17255 IPR022761 Fumarate lyase, N-terminal IF561_17255 IPR008948 L-Aspartase-like IF561_17260 IPR010105 TonB-dependent siderophore receptor IF561_17260 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_17260 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_17260 IPR039423 TonB-dependent receptor-like IF561_17260 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_17260 IPR012910 TonB-dependent receptor, plug domain IF561_17265 IPR010105 TonB-dependent siderophore receptor IF561_17265 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_17265 IPR010916 TonB box, conserved site IF561_17265 IPR010917 TonB-dependent receptor, conserved site IF561_17265 IPR011662 Secretin/TonB, short N-terminal domain IF561_17265 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_17265 IPR012910 TonB-dependent receptor, plug domain IF561_17265 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_17270 IPR002491 ABC transporter periplasmic binding domain IF561_17275 IPR037294 ABC transporter, BtuC-like IF561_17275 IPR000522 ABC transporter, permease protein, BtuC-like IF561_17280 IPR000522 ABC transporter, permease protein, BtuC-like IF561_17280 IPR037294 ABC transporter, BtuC-like IF561_17285 IPR003593 AAA+ ATPase domain IF561_17285 IPR003439 ABC transporter-like IF561_17285 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17285 IPR017871 ABC transporter, conserved site IF561_17290 IPR004090 Chemotaxis methyl-accepting receptor IF561_17290 IPR003660 HAMP domain IF561_17290 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_17290 IPR033480 Single Cache domain 2 IF561_17295 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IF561_17295 IPR011765 Peptidase M16, N-terminal IF561_17295 IPR001431 Peptidase M16, zinc-binding site IF561_17295 IPR007863 Peptidase M16, C-terminal IF561_17305 IPR016047 Peptidase M23 IF561_17305 IPR007340 Opacity-associated protein A IF561_17305 IPR011055 Duplicated hybrid motif IF561_17315 IPR036259 MFS transporter superfamily IF561_17315 IPR011701 Major facilitator superfamily IF561_17315 IPR020846 Major facilitator superfamily domain IF561_17315 IPR004734 Multidrug resistance protein IF561_17325 IPR014756 Immunoglobulin E-set IF561_17325 IPR013783 Immunoglobulin-like fold IF561_17325 IPR017853 Glycoside hydrolase superfamily IF561_17325 IPR011837 Glycogen debranching enzyme, GlgX type IF561_17325 IPR013780 Glycosyl hydrolase, all-beta IF561_17325 IPR004193 Glycoside hydrolase, family 13, N-terminal IF561_17325 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17330 IPR003192 Porin, LamB-type IF561_17330 IPR023738 Maltoporin IF561_17330 IPR036998 Porin, LamB-type superfamily IF561_17345 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17345 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain IF561_17345 IPR013780 Glycosyl hydrolase, all-beta IF561_17345 IPR017853 Glycoside hydrolase superfamily IF561_17345 IPR013783 Immunoglobulin-like fold IF561_17345 IPR032091 Maltogenic Amylase, C-terminal IF561_17350 IPR007346 Endonuclease I IF561_17355 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17355 IPR041111 Pullulanase, Ins domain IF561_17355 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal IF561_17355 IPR011839 Alpha-1,6-glucosidases, pullulanase-type IF561_17355 IPR014756 Immunoglobulin E-set IF561_17355 IPR013783 Immunoglobulin-like fold IF561_17355 IPR017853 Glycoside hydrolase superfamily IF561_17355 IPR013784 Carbohydrate-binding-like fold IF561_17355 IPR005323 Pullulanase, carbohydrate-binding module 41 IF561_17355 IPR040671 Pullulanase, N2 domain IF561_17355 IPR004193 Glycoside hydrolase, family 13, N-terminal IF561_17355 IPR013780 Glycosyl hydrolase, all-beta IF561_17370 IPR000310 Orn/Lys/Arg decarboxylase, major domain IF561_17370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_17370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_17370 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily IF561_17370 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal IF561_17370 IPR027464 Ornithine decarboxylase, N-terminal IF561_17370 IPR011193 Ornithine/lysine/arginine decarboxylase IF561_17370 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal IF561_17370 IPR015424 Pyridoxal phosphate-dependent transferase IF561_17370 IPR011006 CheY-like superfamily IF561_17370 IPR027568 Ornithine decarboxylase SpeF IF561_17375 IPR002293 Amino acid/polyamine transporter I IF561_17375 IPR004754 Amino acid antiporter IF561_17375 IPR027566 Putrescine transporter PotE IF561_17385 IPR004625 Pyridoxine kinase IF561_17385 IPR029056 Ribokinase-like IF561_17385 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IF561_17385 IPR023685 Pyridoxal kinase PdxY IF561_17395 IPR001991 Sodium:dicarboxylate symporter IF561_17395 IPR036458 Sodium:dicarboxylate symporter superfamily IF561_17395 IPR023025 Serine/threonine transporter SstT IF561_17400 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IF561_17400 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17400 IPR004881 Ribosome biogenesis GTPase RsgA IF561_17400 IPR010914 RsgA GTPase domain IF561_17405 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component IF561_17405 IPR001996 Phosphotransferase system, IIB component, type 1 IF561_17405 IPR013013 Phosphotransferase system, EIIC component, type 1 IF561_17405 IPR003352 Phosphotransferase system, EIIC IF561_17405 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IF561_17405 IPR036878 Glucose permease domain IIB IF561_17415 IPR003782 Copper chaperone SCO1/SenC IF561_17415 IPR036249 Thioredoxin-like superfamily IF561_17430 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17430 IPR041617 MalT-like TPR region IF561_17430 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17430 IPR016032 Signal transduction response regulator, C-terminal effector IF561_17430 IPR023768 Transcriptional regulator HTH-type, MalT IF561_17430 IPR011990 Tetratricopeptide-like helical domain superfamily IF561_17430 IPR000792 Transcription regulator LuxR, C-terminal IF561_17435 IPR000811 Glycosyl transferase, family 35 IF561_17435 IPR011833 Glycogen/starch/alpha-glucan phosphorylase IF561_17435 IPR035090 Phosphorylase pyridoxal-phosphate attachment site IF561_17440 IPR003385 Glycoside hydrolase, family 77 IF561_17440 IPR017853 Glycoside hydrolase superfamily IF561_17445 IPR017853 Glycoside hydrolase superfamily IF561_17445 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta IF561_17445 IPR037439 1,4-alpha-glucan-branching enzyme IF561_17445 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB IF561_17445 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17445 IPR004193 Glycoside hydrolase, family 13, N-terminal IF561_17445 IPR013780 Glycosyl hydrolase, all-beta IF561_17445 IPR013783 Immunoglobulin-like fold IF561_17445 IPR014756 Immunoglobulin E-set IF561_17450 IPR011812 Biosynthetic peptidoglycan transglycosylase IF561_17450 IPR036950 Penicillin binding protein transglycosylase domain IF561_17450 IPR023346 Lysozyme-like domain superfamily IF561_17450 IPR001264 Glycosyl transferase, family 51 IF561_17455 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17455 IPR017853 Glycoside hydrolase superfamily IF561_17455 IPR014635 Alpha-amylase, MalS type IF561_17470 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_17475 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_17480 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria IF561_17480 IPR036264 Bacterial exopeptidase dimerisation domain IF561_17480 IPR002933 Peptidase M20 IF561_17480 IPR011650 Peptidase M20, dimerisation domain IF561_17485 IPR010652 Domain of unknown function DUF1232 IF561_17490 IPR033380 Glutamate-aspartate symport protein GltP/GltT IF561_17490 IPR034703 Proton/glutamate-aspartate symporter GltP IF561_17490 IPR018107 Sodium:dicarboxylate symporter, conserved site IF561_17490 IPR036458 Sodium:dicarboxylate symporter superfamily IF561_17490 IPR001991 Sodium:dicarboxylate symporter IF561_17500 IPR005119 LysR, substrate-binding IF561_17500 IPR000847 Transcription regulator HTH, LysR IF561_17500 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17500 IPR036390 Winged helix DNA-binding domain superfamily IF561_17505 IPR011008 Dimeric alpha-beta barrel IF561_17505 IPR014910 Putative monooxygenase YdhR IF561_17515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17515 IPR003856 Polysaccharide chain length determinant N-terminal domain IF561_17515 IPR005702 Exopolysaccharide synthesis protein IF561_17515 IPR025669 AAA domain IF561_17515 IPR032807 Tyrosine kinase, G-rich domain IF561_17520 IPR023485 Phosphotyrosine protein phosphatase I IF561_17520 IPR036196 Phosphotyrosine protein phosphatase I superfamily IF561_17520 IPR017867 Protein-tyrosine phosphatase, low molecular weight IF561_17525 IPR003715 Polysaccharide export protein IF561_17525 IPR019554 Soluble ligand binding domain IF561_17525 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain IF561_17530 IPR000415 Nitroreductase-like IF561_17530 IPR016446 Flavin oxidoreductase Frp family IF561_17530 IPR029479 Nitroreductase IF561_17535 IPR002771 Multiple antibiotic resistance (MarC)-related IF561_17540 IPR037483 YjjU-like IF561_17540 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_17540 IPR002641 Patatin-like phospholipase domain IF561_17545 IPR041029 N-acetylglucosamine binding protein A domain 2 IF561_17545 IPR020879 N-acetylglucosamine-binding protein A IF561_17545 IPR014756 Immunoglobulin E-set IF561_17545 IPR004302 Cellulose/chitin-binding protein, N-terminal IF561_17550 IPR001763 Rhodanese-like domain IF561_17550 IPR036873 Rhodanese-like domain superfamily IF561_17550 IPR020936 Uncharacterised protein family UPF0176 IF561_17550 IPR040503 UPF0176, acylphosphatase-like domain IF561_17555 IPR016181 Acyl-CoA N-acyltransferase IF561_17555 IPR000182 GNAT domain IF561_17560 IPR029058 Alpha/Beta hydrolase fold IF561_17560 IPR000073 Alpha/beta hydrolase fold-1 IF561_17560 IPR002410 Peptidase S33 IF561_17565 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IF561_17565 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IF561_17565 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IF561_17565 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IF561_17565 IPR012338 Beta-lactamase/transpeptidase-like IF561_17565 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IF561_17570 IPR031319 Alpha-amylase, C-terminal domain IF561_17570 IPR013784 Carbohydrate-binding-like fold IF561_17570 IPR002044 Carbohydrate binding module family 20 IF561_17570 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_17570 IPR013780 Glycosyl hydrolase, all-beta IF561_17570 IPR017853 Glycoside hydrolase superfamily IF561_17570 IPR013783 Immunoglobulin-like fold IF561_17575 IPR020449 Transcription regulator HTH, AraC- type IF561_17575 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IF561_17575 IPR018060 DNA binding HTH domain, AraC-type IF561_17575 IPR009057 Homeobox-like domain superfamily IF561_17580 IPR033878 Nitroreductase NfsB-like IF561_17580 IPR029479 Nitroreductase IF561_17580 IPR000415 Nitroreductase-like IF561_17590 IPR005119 LysR, substrate-binding IF561_17590 IPR000847 Transcription regulator HTH, LysR IF561_17590 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17590 IPR036390 Winged helix DNA-binding domain superfamily IF561_17595 IPR018668 DNA-binding protein VF530-like IF561_17595 IPR036361 SAP domain superfamily IF561_17605 IPR017938 Riboflavin synthase-like beta-barrel IF561_17605 IPR033892 Ferredoxin--NADP reductase, bacteria IF561_17605 IPR017927 FAD-binding domain, ferredoxin reductase-type IF561_17605 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain IF561_17605 IPR001433 Oxidoreductase FAD/NAD(P)-binding IF561_17605 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IF561_17615 IPR018635 Uncharacterised protein family UPF0319 IF561_17620 IPR002549 Transmembrane protein TqsA-like IF561_17630 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_17630 IPR006143 RND efflux pump, membrane fusion protein IF561_17630 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA IF561_17650 IPR000620 EamA domain IF561_17655 IPR036390 Winged helix DNA-binding domain superfamily IF561_17655 IPR023746 Transcription regulator HTH, YidZ IF561_17655 IPR000847 Transcription regulator HTH, LysR IF561_17655 IPR005119 LysR, substrate-binding IF561_17655 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17655 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain IF561_17675 IPR016181 Acyl-CoA N-acyltransferase IF561_17675 IPR000182 GNAT domain IF561_17685 IPR013785 Aldolase-type TIM barrel IF561_17685 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial IF561_17685 IPR023001 Fructose-6-phosphate aldolase IF561_17685 IPR001585 Transaldolase/Fructose-6-phosphate aldolase IF561_17685 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase IF561_17685 IPR018225 Transaldolase, active site IF561_17690 IPR034457 Organic radical-activating enzymes IF561_17690 IPR013785 Aldolase-type TIM barrel IF561_17690 IPR001989 Radical-activating enzyme, conserved site IF561_17690 IPR034465 Pyruvate formate-lyase activase IF561_17690 IPR012839 Organic radical enzyme activase IF561_17690 IPR007197 Radical SAM IF561_17695 IPR001150 Glycine radical domain IF561_17695 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family IF561_17695 IPR004184 Pyruvate formate lyase domain IF561_17695 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_17715 IPR012544 Bacterial Pleckstrin homology domain IF561_17715 IPR037063 Bacterial Pleckstrin homology domain superfamily IF561_17725 IPR025713 Motility protein B, N-terminal domain IF561_17725 IPR036737 OmpA-like domain superfamily IF561_17725 IPR006665 OmpA-like domain IF561_17730 IPR000540 Flagellar motor protein MotA, conserved site IF561_17730 IPR022522 Flagellar motor stator, MotA IF561_17730 IPR002898 MotA/TolQ/ExbB proton channel IF561_17735 IPR014284 RNA polymerase sigma-70 like domain IF561_17735 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_17735 IPR013325 RNA polymerase sigma factor, region 2 IF561_17735 IPR000943 RNA polymerase sigma-70 IF561_17735 IPR007627 RNA polymerase sigma-70 region 2 IF561_17735 IPR007630 RNA polymerase sigma-70 region 4 IF561_17735 IPR012845 RNA polymerase sigma factor, FliA/WhiG IF561_17740 IPR005503 Flagellar basal body-associated protein FliL IF561_17755 IPR036584 Flagellar protein FliS superfamily IF561_17755 IPR003713 Flagellar protein FliS IF561_17760 IPR040026 Flagellar hook-associated protein 2 IF561_17760 IPR003481 Flagellar hook-associated protein 2, N-terminal IF561_17760 IPR010810 Flagellin hook, IN motif IF561_17760 IPR010809 Flagellar hook-associated protein 2, C-terminal IF561_17770 IPR001029 Flagellin, D0/D1 domain IF561_17770 IPR042187 Flagellin, C-terminal domain, subdomain 2 IF561_17770 IPR001492 Flagellin IF561_17780 IPR006301 Flagellar biosynthesis protein FlhA IF561_17780 IPR042194 FHIPEP, domain 1 IF561_17780 IPR042193 FHIPEP, domain 3 IF561_17780 IPR001712 Type III secretion system FHIPEP IF561_17780 IPR042196 FHIPEP, domain 4 IF561_17780 IPR025505 FHIPEP conserved site IF561_17785 IPR029025 Type III secretion system substrate exporter, C-terminal IF561_17785 IPR006135 Type III secretion system substrate exporter IF561_17785 IPR006136 Flagellar biosynthetic protein FlhB IF561_17790 IPR006303 Flagellar biosynthesis protein FliR IF561_17790 IPR002010 Type III secretion system inner membrane R protein IF561_17795 IPR002191 Bacterial export protein family 3 IF561_17795 IPR006305 Flagellar biosynthesis protein FliQ IF561_17800 IPR005838 Type III secretion system inner membrane P protein IF561_17800 IPR005837 Flagellar transport protein FliP IF561_17805 IPR036429 SpoA-like superfamily IF561_17805 IPR001543 Surface presentation of antigen (SpoA) IF561_17805 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb IF561_17805 IPR012826 Flagellar motor switch FliN IF561_17820 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_17820 IPR011006 CheY-like superfamily IF561_17820 IPR009057 Homeobox-like domain superfamily IF561_17820 IPR002197 DNA binding HTH domain, Fis-type IF561_17820 IPR029995 Transcriptional activator SfnR/FlbD IF561_17820 IPR025944 Sigma-54 interaction domain, conserved site IF561_17820 IPR003593 AAA+ ATPase domain IF561_17820 IPR001789 Signal transduction response regulator, receiver domain IF561_17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17820 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_17820 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_17825 IPR001624 Flagellar hook-basal body complex protein FliE IF561_17830 IPR013556 Flagellar M-ring C-terminal IF561_17830 IPR006182 Secretory protein YscJ/FliF IF561_17830 IPR000067 Flagellar M-ring protein FliF IF561_17835 IPR023087 Flagellar motor switch protein FliG, C-terminal IF561_17835 IPR011002 Flagellar motor switch protein FliG, alpha-helical IF561_17835 IPR032779 Flagellar motor switch protein FliG, middle domain IF561_17835 IPR028263 Flagellar motor switch protein FliG, N-terminal domain IF561_17835 IPR000090 Flagellar motor switch protein FliG IF561_17845 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IF561_17845 IPR020005 Flagellar export ATPase FliI, clade 1 IF561_17845 IPR032463 ATPase, type III secretion system, FliI IF561_17845 IPR005714 ATPase, type III secretion system, FliI/YscN IF561_17845 IPR003593 AAA+ ATPase domain IF561_17845 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IF561_17845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_17845 IPR040627 T3SS EscN ATPase, C-terminal IF561_17860 IPR005119 LysR, substrate-binding IF561_17860 IPR000847 Transcription regulator HTH, LysR IF561_17860 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17860 IPR036390 Winged helix DNA-binding domain superfamily IF561_17875 IPR016195 Polymerase/histidinol phosphatase-like IF561_17875 IPR023710 Probable phosphatase YcdX IF561_17875 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_17895 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_17895 IPR037478 YwkD-like domain IF561_17895 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_17895 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_17900 IPR036390 Winged helix DNA-binding domain superfamily IF561_17900 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17900 IPR000847 Transcription regulator HTH, LysR IF561_17900 IPR005119 LysR, substrate-binding IF561_17920 IPR039420 Transcriptional regulatory protein WalR-like IF561_17920 IPR001789 Signal transduction response regulator, receiver domain IF561_17920 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_17920 IPR016032 Signal transduction response regulator, C-terminal effector IF561_17920 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_17920 IPR011006 CheY-like superfamily IF561_17925 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_17925 IPR011006 CheY-like superfamily IF561_17925 IPR003594 Histidine kinase/HSP90-like ATPase IF561_17925 IPR005467 Histidine kinase domain IF561_17925 IPR035965 PAS domain superfamily IF561_17925 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_17925 IPR013656 PAS fold-4 IF561_17925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_17925 IPR000700 PAS-associated, C-terminal IF561_17925 IPR000014 PAS domain IF561_17925 IPR001610 PAC motif IF561_17925 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_17925 IPR001789 Signal transduction response regulator, receiver domain IF561_17930 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily IF561_17930 IPR018152 Superoxide dismutase, copper/zinc, binding site IF561_17930 IPR001424 Superoxide dismutase, copper/zinc binding domain IF561_17930 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone IF561_17935 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_17935 IPR000192 Aminotransferase class V domain IF561_17935 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_17935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_17935 IPR015424 Pyridoxal phosphate-dependent transferase IF561_17940 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_17940 IPR018313 Solute-binding protein family 3, conserved site IF561_17940 IPR001320 Ionotropic glutamate receptor IF561_17945 IPR001633 EAL domain IF561_17945 IPR035919 EAL domain superfamily IF561_17945 IPR005330 MHYT domain IF561_17945 IPR029787 Nucleotide cyclase IF561_17945 IPR000160 GGDEF domain IF561_17950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_17950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_17950 IPR004839 Aminotransferase, class I/classII IF561_17950 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IF561_17950 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase IF561_17950 IPR015424 Pyridoxal phosphate-dependent transferase IF561_17955 IPR013149 Alcohol dehydrogenase, C-terminal IF561_17955 IPR013154 Alcohol dehydrogenase, N-terminal IF561_17955 IPR011032 GroES-like superfamily IF561_17955 IPR004627 L-threonine 3-dehydrogenase IF561_17955 IPR036291 NAD(P)-binding domain superfamily IF561_17955 IPR020843 Polyketide synthase, enoylreductase domain IF561_17955 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IF561_17985 IPR041891 Carbonic anhydrase, prokaryotic-like IF561_17985 IPR001148 Alpha carbonic anhydrase domain IF561_17985 IPR036398 Alpha carbonic anhydrase domain superfamily IF561_17985 IPR023561 Carbonic anhydrase, alpha-class IF561_17985 IPR018338 Carbonic anhydrase, alpha-class, conserved site IF561_17990 IPR011066 Mechanosensitive ion channel MscS, C-terminal IF561_17990 IPR010920 LSM domain superfamily IF561_17990 IPR006686 Mechanosensitive ion channel MscS, conserved site IF561_17990 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IF561_17990 IPR023408 Mechanosensitive ion channel MscS domain superfamily IF561_17990 IPR006685 Mechanosensitive ion channel MscS IF561_18000 IPR013785 Aldolase-type TIM barrel IF561_18000 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent IF561_18000 IPR000262 FMN-dependent dehydrogenase IF561_18000 IPR037396 FMN hydroxy acid dehydrogenase domain IF561_18000 IPR020920 L-lactate dehydrogenase, bacterial IF561_18000 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site IF561_18005 IPR003804 L-lactate permease IF561_18010 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18010 IPR000847 Transcription regulator HTH, LysR IF561_18010 IPR005119 LysR, substrate-binding IF561_18010 IPR036390 Winged helix DNA-binding domain superfamily IF561_18015 IPR029058 Alpha/Beta hydrolase fold IF561_18015 IPR023302 Peptidase S9A, N-terminal domain IF561_18015 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IF561_18015 IPR002470 Peptidase S9A, prolyl oligopeptidase IF561_18015 IPR002471 Peptidase S9, serine active site IF561_18020 IPR003439 ABC transporter-like IF561_18020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IF561_18020 IPR017871 ABC transporter, conserved site IF561_18020 IPR003593 AAA+ ATPase domain IF561_18020 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18030 IPR008269 Peptidase S16, Lon proteolytic domain IF561_18030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_18030 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_18030 IPR027065 Lon protease IF561_18030 IPR041699 Lon protease, AAA domain IF561_18035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_18035 IPR003660 HAMP domain IF561_18035 IPR004090 Chemotaxis methyl-accepting receptor IF561_18040 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal IF561_18040 IPR012349 FMN-binding split barrel IF561_18040 IPR009875 PilZ domain IF561_18055 IPR016181 Acyl-CoA N-acyltransferase IF561_18055 IPR000182 GNAT domain IF561_18060 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IF561_18060 IPR004494 MauM/NapG ferredoxin-type protein IF561_18060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_18060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_18065 IPR011886 Ferredoxin-type protein, NapH/MauN family IF561_18065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_18065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_18080 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18080 IPR003439 ABC transporter-like IF561_18080 IPR022216 Putative ABC cobalt transporter IF561_18080 IPR003593 AAA+ ATPase domain IF561_18080 IPR017871 ABC transporter, conserved site IF561_18085 IPR009825 ECF transporter, substrate-specific component-like IF561_18085 IPR022914 Protein of unknown function UPF0397 IF561_18090 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_18095 IPR011223 Uncharacterised conserved protein UCP028770 IF561_18100 IPR029787 Nucleotide cyclase IF561_18100 IPR000160 GGDEF domain IF561_18115 IPR000845 Nucleoside phosphorylase domain IF561_18115 IPR004402 Purine nucleoside phosphorylase DeoD-type IF561_18115 IPR035994 Nucleoside phosphorylase superfamily IF561_18120 IPR013560 Domain of unknown function DUF1722 IF561_18125 IPR009061 Putative DNA-binding domain superfamily IF561_18125 IPR000551 MerR-type HTH domain IF561_18130 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain IF561_18130 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily IF561_18130 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IF561_18130 IPR006050 DNA photolyase, N-terminal IF561_18130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_18130 IPR002081 Cryptochrome/DNA photolyase class 1 IF561_18130 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily IF561_18135 IPR041597 L,D-transpeptidase C-terminal domain IF561_18135 IPR038063 L,D-transpeptidase catalytic domain-like IF561_18135 IPR018392 LysM domain IF561_18135 IPR005490 L,D-transpeptidase catalytic domain IF561_18145 IPR011545 DEAD/DEAH box helicase domain IF561_18145 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_18145 IPR028621 ATP-dependent RNA helicase SrmB IF561_18145 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_18145 IPR001650 Helicase, C-terminal IF561_18145 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18145 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_18150 IPR029058 Alpha/Beta hydrolase fold IF561_18150 IPR002471 Peptidase S9, serine active site IF561_18150 IPR023302 Peptidase S9A, N-terminal domain IF561_18150 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IF561_18150 IPR002470 Peptidase S9A, prolyl oligopeptidase IF561_18155 IPR010917 TonB-dependent receptor, conserved site IF561_18155 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_18155 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_18155 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_18155 IPR039426 Vitamin B12 transporter BtuB-like IF561_18155 IPR012910 TonB-dependent receptor, plug domain IF561_18155 IPR010916 TonB box, conserved site IF561_18175 IPR004090 Chemotaxis methyl-accepting receptor IF561_18175 IPR003660 HAMP domain IF561_18175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_18180 IPR024370 PBP domain IF561_18185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_18185 IPR011864 Phosphate ABC transporter, permease protein PstC IF561_18185 IPR035906 MetI-like superfamily IF561_18190 IPR035906 MetI-like superfamily IF561_18190 IPR005672 Phosphate transport system permease protein PstA IF561_18190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_18195 IPR005670 Phosphate transport system permease protein 1 IF561_18195 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18195 IPR003593 AAA+ ATPase domain IF561_18195 IPR017871 ABC transporter, conserved site IF561_18195 IPR015850 ABC transporter, phosphate import, PstB IF561_18195 IPR003439 ABC transporter-like IF561_18215 IPR022933 Uncharacterised protein family UPF0353 IF561_18215 IPR002035 von Willebrand factor, type A IF561_18215 IPR036465 von Willebrand factor A-like domain superfamily IF561_18220 IPR002035 von Willebrand factor, type A IF561_18220 IPR022933 Uncharacterised protein family UPF0353 IF561_18220 IPR036465 von Willebrand factor A-like domain superfamily IF561_18230 IPR002881 Domain of unknown function DUF58 IF561_18230 IPR036465 von Willebrand factor A-like domain superfamily IF561_18235 IPR011703 ATPase, AAA-3 IF561_18235 IPR041628 ChlI/MoxR, AAA lid domain IF561_18235 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18240 IPR033479 Double Cache domain 1 IF561_18240 IPR003660 HAMP domain IF561_18240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_18250 IPR000792 Transcription regulator LuxR, C-terminal IF561_18250 IPR016032 Signal transduction response regulator, C-terminal effector IF561_18250 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18255 IPR016032 Signal transduction response regulator, C-terminal effector IF561_18255 IPR000792 Transcription regulator LuxR, C-terminal IF561_18255 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18265 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18265 IPR003593 AAA+ ATPase domain IF561_18265 IPR017871 ABC transporter, conserved site IF561_18265 IPR003439 ABC transporter-like IF561_18265 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_18265 IPR011527 ABC transporter type 1, transmembrane domain IF561_18265 IPR010128 ATPase, type I secretion system, PrtD IF561_18270 IPR006144 Secretion protein HlyD, conserved site IF561_18270 IPR010129 Type I secretion membrane fusion protein, HlyD family IF561_18285 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_18285 IPR002368 Outer membrane protein, OmpA IF561_18285 IPR006665 OmpA-like domain IF561_18285 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_18285 IPR036737 OmpA-like domain superfamily IF561_18285 IPR000498 Outer membrane protein OmpA-like, transmembrane domain IF561_18285 IPR006664 Outer membrane protein, bacterial IF561_18295 IPR000522 ABC transporter, permease protein, BtuC-like IF561_18295 IPR037294 ABC transporter, BtuC-like IF561_18300 IPR002491 ABC transporter periplasmic binding domain IF561_18305 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18305 IPR003439 ABC transporter-like IF561_18305 IPR017871 ABC transporter, conserved site IF561_18305 IPR003593 AAA+ ATPase domain IF561_18310 IPR010917 TonB-dependent receptor, conserved site IF561_18310 IPR010105 TonB-dependent siderophore receptor IF561_18310 IPR012910 TonB-dependent receptor, plug domain IF561_18310 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_18310 IPR039423 TonB-dependent receptor-like IF561_18310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_18310 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_18315 IPR039421 Type I protein exporter IF561_18315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18315 IPR003439 ABC transporter-like IF561_18315 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_18315 IPR017871 ABC transporter, conserved site IF561_18315 IPR003593 AAA+ ATPase domain IF561_18315 IPR011527 ABC transporter type 1, transmembrane domain IF561_18320 IPR029016 GAF-like domain superfamily IF561_18320 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18320 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal IF561_18320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_18320 IPR025201 Sensor protein KdpD, transmembrane domain IF561_18320 IPR038318 KdpD, transmembrane domain superfamily IF561_18320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_18320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_18320 IPR005467 Histidine kinase domain IF561_18320 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18320 IPR029016 GAF-like domain superfamily IF561_18320 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal IF561_18320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_18320 IPR005467 Histidine kinase domain IF561_18320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_18320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_18320 IPR038318 KdpD, transmembrane domain superfamily IF561_18320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18320 IPR025201 Sensor protein KdpD, transmembrane domain IF561_18325 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18325 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_18325 IPR001789 Signal transduction response regulator, receiver domain IF561_18325 IPR039420 Transcriptional regulatory protein WalR-like IF561_18325 IPR011006 CheY-like superfamily IF561_18330 IPR003148 Regulator of K+ conductance, N-terminal IF561_18330 IPR036291 NAD(P)-binding domain superfamily IF561_18330 IPR006037 Regulator of K+ conductance, C-terminal IF561_18330 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IF561_18335 IPR004772 TrkH potassium transport family IF561_18335 IPR003445 Cation transporter IF561_18340 IPR000160 GGDEF domain IF561_18340 IPR005330 MHYT domain IF561_18340 IPR001633 EAL domain IF561_18340 IPR029787 Nucleotide cyclase IF561_18340 IPR035919 EAL domain superfamily IF561_18345 IPR014068 Azurin IF561_18345 IPR000923 Blue (type 1) copper domain IF561_18345 IPR028871 Blue (type 1) copper protein, binding site IF561_18345 IPR008972 Cupredoxin IF561_18350 IPR036412 HAD-like superfamily IF561_18350 IPR041492 Haloacid dehalogenase-like hydrolase IF561_18350 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_18350 IPR023214 HAD superfamily IF561_18350 IPR006439 HAD hydrolase, subfamily IA IF561_18360 IPR011051 RmlC-like cupin domain superfamily IF561_18360 IPR014710 RmlC-like jelly roll fold IF561_18360 IPR016305 Mannose-6-phosphate isomerase IF561_18360 IPR001250 Mannose-6-phosphate isomerase, type I IF561_18360 IPR018050 Phosphomannose isomerase, type I, conserved site IF561_18365 IPR006327 Phosphotransferase system, fructose IIC component IF561_18365 IPR016152 Phosphotransferase/anion transporter IF561_18365 IPR002178 PTS EIIA type-2 domain IF561_18365 IPR013011 Phosphotransferase system, EIIB component, type 2 IF561_18365 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_18365 IPR004715 Phosphotransferase system, IIA component fructose subfamily IF561_18365 IPR036095 PTS system IIB component-like superfamily IF561_18365 IPR003353 Phosphotransferase system, fructose-specific IIB subunit IF561_18365 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_18370 IPR018060 DNA binding HTH domain, AraC-type IF561_18370 IPR018062 HTH domain AraC-type, conserved site IF561_18370 IPR020449 Transcription regulator HTH, AraC- type IF561_18370 IPR009057 Homeobox-like domain superfamily IF561_18380 IPR013011 Phosphotransferase system, EIIB component, type 2 IF561_18380 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_18380 IPR003353 Phosphotransferase system, fructose-specific IIB subunit IF561_18380 IPR036095 PTS system IIB component-like superfamily IF561_18385 IPR006327 Phosphotransferase system, fructose IIC component IF561_18385 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_18390 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site IF561_18390 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_18390 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_18390 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IF561_18390 IPR015815 3-hydroxyisobutyrate dehydrogenase-related IF561_18390 IPR036291 NAD(P)-binding domain superfamily IF561_18390 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain IF561_18395 IPR020835 Catalase superfamily IF561_18395 IPR010582 Catalase immune-responsive domain IF561_18395 IPR002226 Catalase haem-binding site IF561_18395 IPR037060 Catalase core domain superfamily IF561_18395 IPR011614 Catalase core domain IF561_18395 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 IF561_18395 IPR024708 Catalase active site IF561_18395 IPR040333 Catalase, clade 3 IF561_18395 IPR018028 Catalase, mono-functional, haem-containing IF561_18400 IPR040079 Glutathione Transferase family IF561_18400 IPR010987 Glutathione S-transferase, C-terminal-like IF561_18400 IPR005955 Glutathione S-transferases, class Zeta IF561_18400 IPR034330 Glutathione S-transferases, class Zeta , C-terminal IF561_18400 IPR034333 Glutathione S-transferases, class Zeta , N-terminal IF561_18400 IPR036249 Thioredoxin-like superfamily IF561_18400 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_18400 IPR004045 Glutathione S-transferase, N-terminal IF561_18405 IPR013149 Alcohol dehydrogenase, C-terminal IF561_18405 IPR011032 GroES-like superfamily IF561_18405 IPR041694 Oxidoreductase, N-terminal domain IF561_18405 IPR036291 NAD(P)-binding domain superfamily IF561_18405 IPR020843 Polyketide synthase, enoylreductase domain IF561_18410 IPR009057 Homeobox-like domain superfamily IF561_18410 IPR001647 DNA-binding HTH domain, TetR-type IF561_18410 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_18410 IPR011075 Tetracyclin repressor-like, C-terminal domain IF561_18415 IPR008314 Uncharacterised conserved protein UCP029143 IF561_18415 IPR015947 PUA-like superfamily IF561_18415 IPR007374 ASCH domain IF561_18445 IPR001296 Glycosyl transferase, family 1 IF561_18445 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IF561_18455 IPR025669 AAA domain IF561_18455 IPR005702 Exopolysaccharide synthesis protein IF561_18455 IPR032807 Tyrosine kinase, G-rich domain IF561_18455 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18455 IPR003856 Polysaccharide chain length determinant N-terminal domain IF561_18470 IPR003362 Bacterial sugar transferase IF561_18470 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IF561_18470 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ IF561_18475 IPR008995 Molybdate/tungstate binding, C-terminal IF561_18475 IPR003439 ABC transporter-like IF561_18475 IPR017871 ABC transporter, conserved site IF561_18475 IPR015855 ABC transporter, maltose/maltodextrin import, MalK IF561_18475 IPR003593 AAA+ ATPase domain IF561_18475 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_18475 IPR013611 Transport-associated OB, type 2 IF561_18480 IPR006061 Solute-binding family 1, conserved site IF561_18480 IPR006059 Bacterial extracellular solute-binding protein IF561_18480 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein IF561_18485 IPR035906 MetI-like superfamily IF561_18485 IPR029345 Maltose transport system permease protein MalF, P2 domain IF561_18485 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like IF561_18485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_18485 IPR035277 MalF, N-terminal IF561_18490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_18490 IPR035906 MetI-like superfamily IF561_18525 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_18525 IPR036291 NAD(P)-binding domain superfamily IF561_18525 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_18525 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_18545 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal IF561_18545 IPR024072 Dihydrofolate reductase-like domain superfamily IF561_18550 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_18550 IPR003012 Tetracycline transcriptional regulator, TetR IF561_18550 IPR004111 Tetracycline repressor TetR, C-terminal IF561_18550 IPR001647 DNA-binding HTH domain, TetR-type IF561_18550 IPR009057 Homeobox-like domain superfamily IF561_18550 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_18555 IPR036249 Thioredoxin-like superfamily IF561_18555 IPR010987 Glutathione S-transferase, C-terminal-like IF561_18555 IPR004045 Glutathione S-transferase, N-terminal IF561_18555 IPR040079 Glutathione Transferase family IF561_18555 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_18560 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IF561_18560 IPR012338 Beta-lactamase/transpeptidase-like IF561_18560 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IF561_18560 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IF561_18560 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IF561_18560 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IF561_18570 IPR013766 Thioredoxin domain IF561_18570 IPR036249 Thioredoxin-like superfamily IF561_18570 IPR013740 Redoxin IF561_18570 IPR037944 Peroxiredoxin-5-like IF561_18570 IPR002109 Glutaredoxin IF561_18570 IPR011767 Glutaredoxin active site IF561_18575 IPR006330 Adenosine/adenine deaminase IF561_18575 IPR032466 Metal-dependent hydrolase IF561_18575 IPR001365 Adenosine/AMP deaminase domain IF561_18575 IPR028892 Adenine deaminase type 2 IF561_18590 IPR012340 Nucleic acid-binding, OB-fold IF561_18590 IPR012156 Cold shock, CspA IF561_18590 IPR011129 Cold shock domain IF561_18590 IPR019844 Cold-shock (CSD) domain IF561_18590 IPR002059 Cold-shock protein, DNA-binding IF561_18595 IPR012093 Pirin IF561_18595 IPR011051 RmlC-like cupin domain superfamily IF561_18595 IPR014710 RmlC-like jelly roll fold IF561_18595 IPR008778 Pirin, C-terminal domain IF561_18595 IPR003829 Pirin, N-terminal domain IF561_18600 IPR037483 YjjU-like IF561_18600 IPR002641 Patatin-like phospholipase domain IF561_18600 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_18610 IPR036390 Winged helix DNA-binding domain superfamily IF561_18610 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18610 IPR023187 Transcriptional regulator MarR-type, conserved site IF561_18610 IPR000835 MarR-type HTH domain IF561_18635 IPR036291 NAD(P)-binding domain superfamily IF561_18635 IPR000683 Oxidoreductase, N-terminal IF561_18640 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_18640 IPR012549 Phosphoethanolamine transferase, N-terminal IF561_18640 IPR040423 Phosphoethanolamine transferase IF561_18640 IPR000917 Sulfatase, N-terminal IF561_18645 IPR000829 DAGK family IF561_18645 IPR036945 Diacylglycerol kinase (DAGK) superfamily IF561_18645 IPR033718 Diacylglycerol kinase, prokaryotic IF561_18655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_18655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_18655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_18655 IPR005467 Histidine kinase domain IF561_18655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18655 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18655 IPR003660 HAMP domain IF561_18660 IPR011006 CheY-like superfamily IF561_18660 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_18660 IPR016032 Signal transduction response regulator, C-terminal effector IF561_18660 IPR001789 Signal transduction response regulator, receiver domain IF561_18660 IPR039420 Transcriptional regulatory protein WalR-like IF561_18660 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18665 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_18665 IPR036291 NAD(P)-binding domain superfamily IF561_18665 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_18680 IPR013766 Thioredoxin domain IF561_18680 IPR036249 Thioredoxin-like superfamily IF561_18680 IPR001853 DSBA-like thioredoxin domain IF561_18680 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL IF561_18695 IPR000889 Glutathione peroxidase IF561_18695 IPR029759 Glutathione peroxidase active site IF561_18695 IPR036249 Thioredoxin-like superfamily IF561_18700 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IF561_18700 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB IF561_18710 IPR023727 Lysophospholipid transporter LplT IF561_18710 IPR011701 Major facilitator superfamily IF561_18710 IPR036259 MFS transporter superfamily IF561_18720 IPR006674 HD domain IF561_18720 IPR003607 HD/PDEase domain IF561_18730 IPR013108 Amidohydrolase 3 IF561_18730 IPR011059 Metal-dependent hydrolase, composite domain superfamily IF561_18730 IPR032466 Metal-dependent hydrolase IF561_18735 IPR030191 Cytosine permease IF561_18735 IPR001248 Purine-cytosine permease IF561_18735 IPR038271 Purine-cytosine permease superfamily IF561_18740 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IF561_18740 IPR006667 SLC41 divalent cation transporters, integral membrane domain IF561_18740 IPR006669 Magnesium transporter MgtE IF561_18740 IPR038048 Magnesium transporter MgtE, transmembrane domain IF561_18740 IPR006668 Magnesium transporter, MgtE intracellular domain IF561_18740 IPR038076 MgtE, N-terminal domain superfamily IF561_18740 IPR000644 CBS domain IF561_18745 IPR010232 Probable protein kinase UbiB IF561_18745 IPR011009 Protein kinase-like domain superfamily IF561_18745 IPR000719 Protein kinase domain IF561_18745 IPR004147 UbiB domain IF561_18755 IPR004839 Aminotransferase, class I/classII IF561_18755 IPR036390 Winged helix DNA-binding domain superfamily IF561_18755 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18755 IPR000524 Transcription regulator HTH, GntR IF561_18755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_18755 IPR015424 Pyridoxal phosphate-dependent transferase IF561_18760 IPR002293 Amino acid/polyamine transporter I IF561_18765 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_18765 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_18765 IPR011008 Dimeric alpha-beta barrel IF561_18765 IPR000485 AsnC-type HTH domain IF561_18765 IPR011991 ArsR-like helix-turn-helix domain IF561_18765 IPR019888 Transcription regulator AsnC-type IF561_18765 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18765 IPR036390 Winged helix DNA-binding domain superfamily IF561_18770 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria IF561_18770 IPR036390 Winged helix DNA-binding domain superfamily IF561_18770 IPR005119 LysR, substrate-binding IF561_18770 IPR000847 Transcription regulator HTH, LysR IF561_18770 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18770 IPR017685 HTH-type transcriptional regulator ArgP IF561_18785 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IF561_18785 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IF561_18785 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IF561_18785 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IF561_18785 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IF561_18785 IPR036291 NAD(P)-binding domain superfamily IF561_18790 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18790 IPR011006 CheY-like superfamily IF561_18790 IPR001789 Signal transduction response regulator, receiver domain IF561_18790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18790 IPR003660 HAMP domain IF561_18790 IPR036641 HPT domain superfamily IF561_18790 IPR019247 Histidine kinase BarA, N-terminal IF561_18790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_18790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_18790 IPR005467 Histidine kinase domain IF561_18790 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_18790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_18795 IPR036291 NAD(P)-binding domain superfamily IF561_18795 IPR000683 Oxidoreductase, N-terminal IF561_18800 IPR002528 Multi antimicrobial extrusion protein IF561_18805 IPR007458 Protein of unknown function DUF496 IF561_18815 IPR007432 Protein of unknown function DUF480 IF561_18815 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18815 IPR036390 Winged helix DNA-binding domain superfamily IF561_18820 IPR000305 GIY-YIG endonuclease IF561_18820 IPR035901 GIY-YIG endonuclease superfamily IF561_18825 IPR028082 Periplasmic binding protein-like I IF561_18825 IPR025997 Periplasmic binding protein IF561_18830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_18830 IPR015387 LuxQ, periplasmic IF561_18830 IPR035965 PAS domain superfamily IF561_18830 IPR029151 Periplasmic sensor-like domain superfamily IF561_18830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_18830 IPR005467 Histidine kinase domain IF561_18830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18830 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18830 IPR011006 CheY-like superfamily IF561_18830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_18830 IPR001789 Signal transduction response regulator, receiver domain IF561_18840 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_18860 IPR036390 Winged helix DNA-binding domain superfamily IF561_18860 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_18860 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IF561_18860 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IF561_18860 IPR019888 Transcription regulator AsnC-type IF561_18860 IPR011008 Dimeric alpha-beta barrel IF561_18860 IPR000485 AsnC-type HTH domain IF561_18860 IPR011991 ArsR-like helix-turn-helix domain IF561_18885 IPR001036 Acriflavin resistance protein IF561_18885 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IF561_18885 IPR027398 SecD export protein N-terminal TM domain IF561_18885 IPR005791 Protein translocase subunit SecD IF561_18885 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IF561_18885 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IF561_18890 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IF561_18890 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IF561_18890 IPR005665 Protein-export membrane protein SecF, bacterial IF561_18890 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IF561_18900 IPR001123 Amino acid exporter protein, LeuE-type IF561_18905 IPR036291 NAD(P)-binding domain superfamily IF561_18905 IPR011283 Acetoacetyl-CoA reductase IF561_18905 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_18905 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_18910 IPR002155 Thiolase IF561_18910 IPR016039 Thiolase-like IF561_18910 IPR020615 Thiolase, acyl-enzyme intermediate active site IF561_18910 IPR020610 Thiolase, active site IF561_18910 IPR020613 Thiolase, conserved site IF561_18910 IPR020617 Thiolase, C-terminal IF561_18910 IPR020616 Thiolase, N-terminal IF561_18920 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain IF561_18920 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I IF561_18920 IPR029058 Alpha/Beta hydrolase fold IF561_18930 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT IF561_18930 IPR036280 Multiheme cytochrome superfamily IF561_18930 IPR038266 NapC/NirT cytochrome c superfamily IF561_18930 IPR005126 NapC/NirT cytochrome c, N-terminal IF561_18930 IPR024717 Denitrification system component NapC/NirT/NrfH IF561_18930 IPR011031 Multihaem cytochrome IF561_18935 IPR011031 Multihaem cytochrome IF561_18935 IPR036280 Multiheme cytochrome superfamily IF561_18935 IPR005591 Nitrate reductase cytochrome c-type subunit NapB IF561_18940 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_18940 IPR010051 Periplasmic nitrate reductase, large subunit IF561_18940 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IF561_18940 IPR006657 Molybdopterin dinucleotide-binding domain IF561_18940 IPR006656 Molybdopterin oxidoreductase IF561_18940 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain IF561_18940 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_18940 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_18950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_18950 IPR004496 Ferredoxin-type protein NapF IF561_18950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_18955 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing IF561_18955 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IF561_18955 IPR003594 Histidine kinase/HSP90-like ATPase IF561_18955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_18955 IPR005467 Histidine kinase domain IF561_18955 IPR029095 NarX-like, N-terminal IF561_18955 IPR042295 NarX-like, N-terminal domain superfamily IF561_18955 IPR003660 HAMP domain IF561_18960 IPR000792 Transcription regulator LuxR, C-terminal IF561_18960 IPR001789 Signal transduction response regulator, receiver domain IF561_18960 IPR016032 Signal transduction response regulator, C-terminal effector IF561_18960 IPR011006 CheY-like superfamily IF561_18975 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IF561_18975 IPR002933 Peptidase M20 IF561_18975 IPR011650 Peptidase M20, dimerisation domain IF561_18975 IPR010161 Peptidase M20B, tripeptide aminopeptidase IF561_18975 IPR036264 Bacterial exopeptidase dimerisation domain IF561_18980 IPR016473 Deoxycytidylate deaminase IF561_18980 IPR016192 APOBEC/CMP deaminase, zinc-binding IF561_18980 IPR035105 Deoxycytidylate deaminase domain IF561_18980 IPR016193 Cytidine deaminase-like IF561_18980 IPR002125 Cytidine and deoxycytidylate deaminase domain IF561_18980 IPR015517 Deoxycytidylate deaminase-related IF561_18985 IPR006143 RND efflux pump, membrane fusion protein IF561_18985 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_18990 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IF561_18990 IPR001036 Acriflavin resistance protein IF561_18990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_18995 IPR000727 Target SNARE coiled-coil homology domain IF561_18995 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_18995 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_18995 IPR003660 HAMP domain IF561_18995 IPR004090 Chemotaxis methyl-accepting receptor IF561_19000 IPR000352 Peptide chain release factor class I IF561_19005 IPR010976 Beta-phosphoglucomutase hydrolase IF561_19005 IPR036412 HAD-like superfamily IF561_19005 IPR006439 HAD hydrolase, subfamily IA IF561_19005 IPR041492 Haloacid dehalogenase-like hydrolase IF561_19005 IPR023214 HAD superfamily IF561_19005 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_19010 IPR006664 Outer membrane protein, bacterial IF561_19010 IPR002368 Outer membrane protein, OmpA IF561_19010 IPR006665 OmpA-like domain IF561_19010 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_19010 IPR036737 OmpA-like domain superfamily IF561_19010 IPR000498 Outer membrane protein OmpA-like, transmembrane domain IF561_19010 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_19015 IPR006218 DAHP synthetase I/KDSA IF561_19015 IPR013785 Aldolase-type TIM barrel IF561_19015 IPR006219 DHAP synthase, class 1 IF561_19020 IPR020846 Major facilitator superfamily domain IF561_19020 IPR011701 Major facilitator superfamily IF561_19020 IPR036259 MFS transporter superfamily IF561_19025 IPR001610 PAC motif IF561_19025 IPR003660 HAMP domain IF561_19025 IPR000014 PAS domain IF561_19025 IPR035965 PAS domain superfamily IF561_19025 IPR013655 PAS fold-3 IF561_19025 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_19025 IPR004090 Chemotaxis methyl-accepting receptor IF561_19030 IPR029061 Thiamin diphosphate-binding fold IF561_19030 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IF561_19030 IPR005475 Transketolase-like, pyrimidine-binding domain IF561_19030 IPR005478 Transketolase, bacterial-like IF561_19030 IPR020826 Transketolase binding site IF561_19030 IPR033248 Transketolase, C-terminal domain IF561_19030 IPR033247 Transketolase family IF561_19030 IPR005474 Transketolase, N-terminal IF561_19035 IPR013785 Aldolase-type TIM barrel IF561_19035 IPR001585 Transaldolase/Fructose-6-phosphate aldolase IF561_19035 IPR018225 Transaldolase, active site IF561_19035 IPR004730 Transaldolase type 1 IF561_19045 IPR014756 Immunoglobulin E-set IF561_19045 IPR013783 Immunoglobulin-like fold IF561_19045 IPR017853 Glycoside hydrolase superfamily IF561_19045 IPR001579 Glycoside hydrolase, chitinase active site IF561_19045 IPR001223 Glycoside hydrolase family 18, catalytic domain IF561_19045 IPR013540 Chitinase A N-terminal IF561_19045 IPR029070 Chitinase insertion domain superfamily IF561_19045 IPR011583 Chitinase II IF561_19045 IPR036573 Carbohydrate-binding module superfamily 5/12 IF561_19045 IPR003610 Carbohydrate-binding module family 5/12 IF561_19045 IPR002126 Cadherin-like IF561_19045 IPR022409 PKD/Chitinase domain IF561_19050 IPR001633 EAL domain IF561_19050 IPR035919 EAL domain superfamily IF561_19050 IPR000160 GGDEF domain IF561_19050 IPR005330 MHYT domain IF561_19050 IPR029787 Nucleotide cyclase IF561_19055 IPR001763 Rhodanese-like domain IF561_19055 IPR036873 Rhodanese-like domain superfamily IF561_19055 IPR001307 Thiosulphate sulfurtransferase, conserved site IF561_19075 IPR035985 Ubiquitin-activating enzyme IF561_19075 IPR012730 Molybdopterin synthase sulfurylase MoeB IF561_19075 IPR000594 THIF-type NAD/FAD binding fold IF561_19080 IPR036425 MoaB/Mog-like domain superfamily IF561_19080 IPR001453 MoaB/Mog domain IF561_19080 IPR005111 MoeA, C-terminal, domain IV IF561_19080 IPR008284 Molybdenum cofactor biosynthesis, conserved site IF561_19080 IPR038987 Molybdopterin biosynthesis protein MoeA-like IF561_19080 IPR005110 MoeA, N-terminal and linker domain IF561_19080 IPR036688 MoeA, C-terminal, domain IV superfamily IF561_19080 IPR036135 MoeA, N-terminal and linker domain superfamily IF561_19085 IPR018234 GTP cyclohydrolase I, conserved site IF561_19085 IPR001474 GTP cyclohydrolase I IF561_19085 IPR020602 GTP cyclohydrolase I domain IF561_19090 IPR001046 NRAMP family IF561_19100 IPR023861 Chloride channel, ClcA IF561_19100 IPR014743 Chloride channel, core IF561_19100 IPR001807 Chloride channel, voltage gated IF561_19115 IPR023210 NADP-dependent oxidoreductase domain IF561_19115 IPR020471 Aldo/keto reductase IF561_19115 IPR036812 NADP-dependent oxidoreductase domain superfamily IF561_19120 IPR011006 CheY-like superfamily IF561_19120 IPR001789 Signal transduction response regulator, receiver domain IF561_19130 IPR017953 Carbohydrate kinase, predicted, conserved site IF561_19130 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase IF561_19130 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr IF561_19130 IPR029056 Ribokinase-like IF561_19130 IPR004443 YjeF N-terminal domain IF561_19130 IPR036652 YjeF N-terminal domain superfamily IF561_19135 IPR013785 Aldolase-type TIM barrel IF561_19135 IPR005993 GMP reductase IF561_19135 IPR015875 IMP dehydrogenase / GMP reductase, conserved site IF561_19135 IPR001093 IMP dehydrogenase/GMP reductase IF561_19145 IPR036397 Ribonuclease H superfamily IF561_19145 IPR001584 Integrase, catalytic core IF561_19145 IPR009004 Transposase, Mu, C-terminal IF561_19145 IPR015378 Transposase-like, Mu, C-terminal IF561_19145 IPR009057 Homeobox-like domain superfamily IF561_19145 IPR012337 Ribonuclease H-like superfamily IF561_19145 IPR038965 Transposase InsF-like IF561_19175 IPR024474 Zinc-finger binding domain of transposase IS66 IF561_19175 IPR024463 Transposase TnpC, homeodomain IF561_19175 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19175 IPR039552 Transposase IS66, C-terminal IF561_19175 IPR004291 Transposase, IS66 IF561_19190 IPR006935 Helicase/UvrB, N-terminal IF561_19190 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_19190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19200 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_19200 IPR001387 Cro/C1-type helix-turn-helix domain IF561_19225 IPR018201 Beta-ketoacyl synthase, active site IF561_19225 IPR014031 Beta-ketoacyl synthase, C-terminal IF561_19225 IPR014043 Acyl transferase IF561_19225 IPR014030 Beta-ketoacyl synthase, N-terminal IF561_19225 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IF561_19225 IPR001227 Acyl transferase domain superfamily IF561_19225 IPR032821 Ketoacyl-synthetase, C-terminal extension IF561_19225 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IF561_19225 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IF561_19225 IPR009081 Phosphopantetheine binding ACP domain IF561_19225 IPR036736 ACP-like superfamily IF561_19225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IF561_19225 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_19225 IPR001242 Condensation domain IF561_19225 IPR016039 Thiolase-like IF561_19230 IPR006162 Phosphopantetheine attachment site IF561_19230 IPR009081 Phosphopantetheine binding ACP domain IF561_19230 IPR000873 AMP-dependent synthetase/ligase IF561_19230 IPR010060 Non-ribosomal peptide synthase IF561_19230 IPR010080 Thioester reductase-like domain IF561_19230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IF561_19230 IPR001242 Condensation domain IF561_19230 IPR013120 Male sterility, NAD-binding IF561_19230 IPR010071 Amino acid adenylation domain IF561_19230 IPR036736 ACP-like superfamily IF561_19230 IPR025110 AMP-binding enzyme, C-terminal domain IF561_19230 IPR020845 AMP-binding, conserved site IF561_19230 IPR036291 NAD(P)-binding domain superfamily IF561_19230 IPR042099 AMP-dependent synthetase-like superfamily IF561_19230 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_19240 IPR018235 Bacterial luciferase, conserved site IF561_19240 IPR033924 Alkanal monooxygenase IF561_19240 IPR036661 Luciferase-like domain superfamily IF561_19240 IPR002103 Bacterial luciferase/NFP IF561_19240 IPR011251 Luciferase-like domain IF561_19245 IPR011701 Major facilitator superfamily IF561_19245 IPR020846 Major facilitator superfamily domain IF561_19245 IPR036259 MFS transporter superfamily IF561_19245 IPR004734 Multidrug resistance protein IF561_19245 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IF561_19250 IPR009081 Phosphopantetheine binding ACP domain IF561_19250 IPR010071 Amino acid adenylation domain IF561_19250 IPR036736 ACP-like superfamily IF561_19250 IPR025110 AMP-binding enzyme, C-terminal domain IF561_19250 IPR020845 AMP-binding, conserved site IF561_19250 IPR000873 AMP-dependent synthetase/ligase IF561_19250 IPR042099 AMP-dependent synthetase-like superfamily IF561_19250 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_19250 IPR001242 Condensation domain IF561_19250 IPR010060 Non-ribosomal peptide synthase IF561_19250 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IF561_19250 IPR006162 Phosphopantetheine attachment site IF561_19260 IPR001031 Thioesterase IF561_19260 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS IF561_19260 IPR029058 Alpha/Beta hydrolase fold IF561_19265 IPR000182 GNAT domain IF561_19265 IPR016181 Acyl-CoA N-acyltransferase IF561_19270 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain IF561_19270 IPR008278 4'-phosphopantetheinyl transferase domain IF561_19270 IPR037143 4'-phosphopantetheinyl transferase domain superfamily IF561_19270 IPR003542 Enterobactin synthetase-like, component D IF561_19275 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IF561_19275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_19275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_19275 IPR015424 Pyridoxal phosphate-dependent transferase IF561_19275 IPR005861 Histidinol-phosphate aminotransferase family IF561_19275 IPR004839 Aminotransferase, class I/classII IF561_19280 IPR025110 AMP-binding enzyme, C-terminal domain IF561_19280 IPR005914 Acetoacetyl-CoA synthase IF561_19280 IPR020845 AMP-binding, conserved site IF561_19280 IPR000873 AMP-dependent synthetase/ligase IF561_19280 IPR042099 AMP-dependent synthetase-like superfamily IF561_19285 IPR001308 Electron transfer flavoprotein alpha subunit/FixB IF561_19285 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal IF561_19285 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal IF561_19285 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site IF561_19285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_19285 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_19285 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IF561_19290 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site IF561_19290 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IF561_19290 IPR012255 Electron transfer flavoprotein, beta subunit IF561_19290 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal IF561_19290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_19295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_19295 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase IF561_19295 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_19300 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal IF561_19300 IPR003439 ABC transporter-like IF561_19300 IPR017871 ABC transporter, conserved site IF561_19300 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19300 IPR003593 AAA+ ATPase domain IF561_19325 IPR003439 ABC transporter-like IF561_19325 IPR003593 AAA+ ATPase domain IF561_19325 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein IF561_19325 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19325 IPR017871 ABC transporter, conserved site IF561_19330 IPR028154 AMP-dependent ligase, C-terminal IF561_19330 IPR000873 AMP-dependent synthetase/ligase IF561_19330 IPR042099 AMP-dependent synthetase-like superfamily IF561_19330 IPR011880 Phenylacetate-CoA ligase IF561_19335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_19335 IPR025835 Thiopurine S-methyltransferase IF561_19335 IPR008854 TPMT family IF561_19335 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification IF561_19345 IPR009056 Cytochrome c-like domain IF561_19345 IPR036909 Cytochrome c-like domain superfamily IF561_19345 IPR002327 Cytochrome c, class IA/ IB IF561_19355 IPR000551 MerR-type HTH domain IF561_19355 IPR009061 Putative DNA-binding domain superfamily IF561_19360 IPR003779 Carboxymuconolactone decarboxylase-like IF561_19360 IPR012788 4-carboxymuconolactone decarboxylase IF561_19360 IPR029032 AhpD-like IF561_19365 IPR003719 Phenazine biosynthesis PhzF protein IF561_19375 IPR003317 Cytochrome ubiquinol oxidase subunit 2 IF561_19380 IPR002585 Cytochrome ubiquinol oxidase subunit 1 IF561_19385 IPR036390 Winged helix DNA-binding domain superfamily IF561_19385 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_19385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_19385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_19385 IPR015424 Pyridoxal phosphate-dependent transferase IF561_19385 IPR004839 Aminotransferase, class I/classII IF561_19385 IPR000524 Transcription regulator HTH, GntR IF561_19390 IPR011004 Trimeric LpxA-like superfamily IF561_19390 IPR024688 Maltose/galactoside acetyltransferase IF561_19390 IPR018357 Hexapeptide transferase, conserved site IF561_19390 IPR001451 Hexapeptide repeat IF561_19395 IPR010920 LSM domain superfamily IF561_19395 IPR006685 Mechanosensitive ion channel MscS IF561_19395 IPR023408 Mechanosensitive ion channel MscS domain superfamily IF561_19395 IPR006686 Mechanosensitive ion channel MscS, conserved site IF561_19395 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IF561_19395 IPR025692 Mechanosensitive ion channel inner membrane domain 1 IF561_19395 IPR024393 Mechanosensitive ion channel MscS, porin domain IF561_19395 IPR011066 Mechanosensitive ion channel MscS, C-terminal IF561_19410 IPR036641 HPT domain superfamily IF561_19410 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_19410 IPR001789 Signal transduction response regulator, receiver domain IF561_19410 IPR019247 Histidine kinase BarA, N-terminal IF561_19410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_19410 IPR005467 Histidine kinase domain IF561_19410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_19410 IPR003594 Histidine kinase/HSP90-like ATPase IF561_19410 IPR003660 HAMP domain IF561_19410 IPR011006 CheY-like superfamily IF561_19410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_19410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_19415 IPR000891 Pyruvate carboxyltransferase IF561_19415 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site IF561_19415 IPR013785 Aldolase-type TIM barrel IF561_19420 IPR005481 Biotin carboxylase-like, N-terminal domain IF561_19420 IPR011054 Rudiment single hybrid motif IF561_19420 IPR016185 Pre-ATP-grasp domain superfamily IF561_19420 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IF561_19420 IPR000089 Biotin/lipoyl attachment IF561_19420 IPR005482 Biotin carboxylase, C-terminal IF561_19420 IPR011764 Biotin carboxylation domain IF561_19420 IPR001882 Biotin-binding site IF561_19420 IPR011053 Single hybrid motif IF561_19420 IPR011761 ATP-grasp fold IF561_19425 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB IF561_19425 IPR029045 ClpP/crotonase-like domain superfamily IF561_19425 IPR001753 Enoyl-CoA hydratase/isomerase IF561_19425 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_19430 IPR034733 Acetyl-CoA carboxylase IF561_19430 IPR029045 ClpP/crotonase-like domain superfamily IF561_19430 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IF561_19430 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IF561_19435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_19435 IPR006089 Acyl-CoA dehydrogenase, conserved site IF561_19435 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_19435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_19435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_19435 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_19435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_19440 IPR015358 Transcription regulator MerR, DNA binding IF561_19440 IPR000551 MerR-type HTH domain IF561_19440 IPR011789 Cu(I)-responsive transcriptional regulator IF561_19440 IPR009061 Putative DNA-binding domain superfamily IF561_19445 IPR016039 Thiolase-like IF561_19445 IPR020610 Thiolase, active site IF561_19445 IPR002155 Thiolase IF561_19445 IPR020615 Thiolase, acyl-enzyme intermediate active site IF561_19445 IPR020617 Thiolase, C-terminal IF561_19445 IPR020616 Thiolase, N-terminal IF561_19445 IPR020613 Thiolase, conserved site IF561_19450 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_19450 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_19450 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_19450 IPR015590 Aldehyde dehydrogenase domain IF561_19450 IPR010061 Methylmalonate-semialdehyde dehydrogenase IF561_19450 IPR016161 Aldehyde/histidinol dehydrogenase IF561_19455 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_19455 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_19455 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_19455 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_19455 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_19455 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_19455 IPR006089 Acyl-CoA dehydrogenase, conserved site IF561_19460 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_19460 IPR001753 Enoyl-CoA hydratase/isomerase IF561_19460 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_19460 IPR029045 ClpP/crotonase-like domain superfamily IF561_19470 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_19470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_19470 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site IF561_19470 IPR011548 3-hydroxyisobutyrate dehydrogenase IF561_19470 IPR036291 NAD(P)-binding domain superfamily IF561_19470 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain IF561_19470 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IF561_19470 IPR015815 3-hydroxyisobutyrate dehydrogenase-related IF561_19475 IPR036291 NAD(P)-binding domain superfamily IF561_19475 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_19475 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_19475 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_19480 IPR033416 Periplasmic sensor domain CHASE7 IF561_19480 IPR000160 GGDEF domain IF561_19480 IPR029787 Nucleotide cyclase IF561_19485 IPR039538 BetI-type transcriptional repressor, C-terminal IF561_19485 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_19485 IPR001647 DNA-binding HTH domain, TetR-type IF561_19485 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_19485 IPR017757 Transcriptional repressor BetI IF561_19485 IPR009057 Homeobox-like domain superfamily IF561_19490 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_19490 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_19490 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_19490 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_19490 IPR015590 Aldehyde dehydrogenase domain IF561_19490 IPR011264 Betaine aldehyde dehydrogenase IF561_19490 IPR016161 Aldehyde/histidinol dehydrogenase IF561_19495 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IF561_19495 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IF561_19495 IPR012132 Glucose-methanol-choline oxidoreductase IF561_19495 IPR011533 Oxygen-dependent choline dehydrogenase IF561_19495 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_19495 IPR027424 Glucose Oxidase, domain 2 IF561_19500 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain IF561_19505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_19505 IPR035906 MetI-like superfamily IF561_19510 IPR003593 AAA+ ATPase domain IF561_19510 IPR003439 ABC transporter-like IF561_19510 IPR017871 ABC transporter, conserved site IF561_19510 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19510 IPR000644 CBS domain IF561_19510 IPR005892 Glycine betaine transport ATP-binding subunit IF561_19515 IPR033878 Nitroreductase NfsB-like IF561_19515 IPR029479 Nitroreductase IF561_19515 IPR000415 Nitroreductase-like IF561_19525 IPR001972 Stomatin family IF561_19525 IPR032435 Band 7, C-terminal extension IF561_19525 IPR018080 Band 7/stomatin-like, conserved site IF561_19525 IPR036013 Band 7/SPFH domain superfamily IF561_19525 IPR001107 Band 7 domain IF561_19535 IPR000160 GGDEF domain IF561_19535 IPR001633 EAL domain IF561_19535 IPR035919 EAL domain superfamily IF561_19535 IPR005330 MHYT domain IF561_19535 IPR029787 Nucleotide cyclase IF561_19535 IPR000014 PAS domain IF561_19535 IPR035965 PAS domain superfamily IF561_19540 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase IF561_19540 IPR004852 Di-haem cytochrome c peroxidase IF561_19540 IPR009056 Cytochrome c-like domain IF561_19540 IPR036909 Cytochrome c-like domain superfamily IF561_19545 IPR005467 Histidine kinase domain IF561_19545 IPR003594 Histidine kinase/HSP90-like ATPase IF561_19545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_19545 IPR001789 Signal transduction response regulator, receiver domain IF561_19545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_19545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_19545 IPR015387 LuxQ, periplasmic IF561_19545 IPR035965 PAS domain superfamily IF561_19545 IPR029151 Periplasmic sensor-like domain superfamily IF561_19545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_19545 IPR011006 CheY-like superfamily IF561_19560 IPR006694 Fatty acid hydroxylase IF561_19570 IPR013762 Integrase-like, catalytic domain superfamily IF561_19570 IPR010998 Integrase/recombinase, N-terminal IF561_19570 IPR022000 Min27-like integrase, DNA-binding domain IF561_19570 IPR002104 Integrase, catalytic domain IF561_19570 IPR011010 DNA breaking-rejoining enzyme, catalytic core IF561_19580 IPR039430 Thymidylate kinase-like domain IF561_19580 IPR018095 Thymidylate kinase, conserved site IF561_19580 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19580 IPR018094 Thymidylate kinase IF561_19655 IPR010049 MTA/SAH nucleosidase IF561_19655 IPR000845 Nucleoside phosphorylase domain IF561_19655 IPR035994 Nucleoside phosphorylase superfamily IF561_19660 IPR001633 EAL domain IF561_19660 IPR035919 EAL domain superfamily IF561_19660 IPR003660 HAMP domain IF561_19660 IPR029787 Nucleotide cyclase IF561_19660 IPR000160 GGDEF domain IF561_19665 IPR023064 D-ribose pyranase IF561_19665 IPR023750 RbsD-like superfamily IF561_19665 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU IF561_19670 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19670 IPR015861 ABC transporter, ribose import, RbsA IF561_19670 IPR017871 ABC transporter, conserved site IF561_19670 IPR003439 ABC transporter-like IF561_19670 IPR003593 AAA+ ATPase domain IF561_19675 IPR001851 ABC transporter, permease IF561_19680 IPR025997 Periplasmic binding protein IF561_19680 IPR028082 Periplasmic binding protein-like I IF561_19685 IPR011611 Carbohydrate kinase PfkB IF561_19685 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_19685 IPR029056 Ribokinase-like IF561_19685 IPR002139 Ribokinase/fructokinase IF561_19685 IPR011877 Ribokinase IF561_19690 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_19690 IPR028082 Periplasmic binding protein-like I IF561_19690 IPR000843 LacI-type HTH domain IF561_19700 IPR006419 Nicotinamide mononucleotide transporter PnuC IF561_19705 IPR018016 Nucleoside phosphorylase, conserved site IF561_19705 IPR000845 Nucleoside phosphorylase domain IF561_19705 IPR035994 Nucleoside phosphorylase superfamily IF561_19705 IPR010058 Uridine phosphorylase IF561_19720 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_19720 IPR039420 Transcriptional regulatory protein WalR-like IF561_19720 IPR001789 Signal transduction response regulator, receiver domain IF561_19720 IPR011006 CheY-like superfamily IF561_19720 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_19735 IPR018299 Alkaline phosphatase, active site IF561_19735 IPR001952 Alkaline phosphatase IF561_19735 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_19745 IPR002884 P domain IF561_19745 IPR000209 Peptidase S8/S53 domain IF561_19745 IPR036852 Peptidase S8/S53 domain superfamily IF561_19745 IPR023827 Peptidase S8, subtilisin, Asp-active site IF561_19745 IPR023828 Peptidase S8, subtilisin, Ser-active site IF561_19745 IPR015500 Peptidase S8, subtilisin-related IF561_19745 IPR008979 Galactose-binding-like domain superfamily IF561_19755 IPR001789 Signal transduction response regulator, receiver domain IF561_19755 IPR029787 Nucleotide cyclase IF561_19755 IPR000160 GGDEF domain IF561_19755 IPR011006 CheY-like superfamily IF561_19760 IPR018227 Amino acid/polyamine transporter 2 IF561_19760 IPR004694 Hydroxy amino acid transporter IF561_19770 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IF561_19770 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_19770 IPR006656 Molybdopterin oxidoreductase IF561_19770 IPR006657 Molybdopterin dinucleotide-binding domain IF561_19770 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_19775 IPR035996 Tetrapyrrole methylase superfamily IF561_19775 IPR006366 Uroporphyrin-III C-methyltransferase IF561_19775 IPR000878 Tetrapyrrole methylase IF561_19775 IPR036291 NAD(P)-binding domain superfamily IF561_19775 IPR014777 Tetrapyrrole methylase, subdomain 1 IF561_19775 IPR037115 Sirohaem synthase, dimerisation domain superfamily IF561_19775 IPR028281 Siroheme synthase, central domain IF561_19775 IPR019478 Sirohaem synthase, dimerisation domain IF561_19775 IPR006367 Sirohaem synthase, N-terminal IF561_19775 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IF561_19775 IPR012409 Sirohaem synthase IF561_19775 IPR014776 Tetrapyrrole methylase, subdomain 2 IF561_19780 IPR000312 Glycosyl transferase, family 3 IF561_19780 IPR017459 Glycosyl transferase family 3, N-terminal domain IF561_19780 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IF561_19780 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IF561_19780 IPR005940 Anthranilate phosphoribosyl transferase IF561_19785 IPR029058 Alpha/Beta hydrolase fold IF561_19785 IPR002925 Dienelactone hydrolase IF561_19790 IPR010910 Nitrate/nitrite sensing protein, bacterial IF561_19790 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_19790 IPR013587 Nitrate/nitrite sensing protein IF561_19790 IPR005561 ANTAR domain IF561_19790 IPR011006 CheY-like superfamily IF561_19795 IPR029070 Chitinase insertion domain superfamily IF561_19795 IPR006311 Twin-arginine translocation pathway, signal sequence IF561_19800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_19800 IPR035906 MetI-like superfamily IF561_19800 IPR005889 Nitrate transport permease IF561_19805 IPR003593 AAA+ ATPase domain IF561_19805 IPR003439 ABC transporter-like IF561_19805 IPR017871 ABC transporter, conserved site IF561_19805 IPR005890 Nitrate transport ATP-binding subunit C/D IF561_19805 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19810 IPR007419 BFD-like [2Fe-2S]-binding domain IF561_19810 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal IF561_19810 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IF561_19810 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type IF561_19810 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IF561_19810 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IF561_19810 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB IF561_19810 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IF561_19810 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IF561_19810 IPR023753 FAD/NAD(P)-binding domain IF561_19810 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_19810 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily IF561_19825 IPR009057 Homeobox-like domain superfamily IF561_19825 IPR001647 DNA-binding HTH domain, TetR-type IF561_19825 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_19825 IPR013572 Transcription regulator MAATS, C-terminal IF561_19825 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IF561_19840 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase IF561_19840 IPR011006 CheY-like superfamily IF561_19840 IPR001789 Signal transduction response regulator, receiver domain IF561_19840 IPR029787 Nucleotide cyclase IF561_19865 IPR011009 Protein kinase-like domain superfamily IF561_19865 IPR005543 PASTA domain IF561_19865 IPR000719 Protein kinase domain IF561_19865 IPR017441 Protein kinase, ATP binding site IF561_19865 IPR008271 Serine/threonine-protein kinase, active site IF561_19880 IPR010263 Type VI secretion protein, VC_A0114 IF561_19885 IPR036737 OmpA-like domain superfamily IF561_19885 IPR006665 OmpA-like domain IF561_19885 IPR025713 Motility protein B, N-terminal domain IF561_19890 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19890 IPR017731 Type VI secretion system, IcmF IF561_19890 IPR010623 Type VI secretion system IcmF, C-terminal IF561_19890 IPR025743 IcmF-related, N-terminal domain IF561_19890 IPR009612 IcmF-related IF561_19900 IPR001932 PPM-type phosphatase domain IF561_19900 IPR036457 PPM-type phosphatase domain superfamily IF561_19900 IPR015655 Protein phosphatase 2C family IF561_19910 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 IF561_19915 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath IF561_19920 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath IF561_19935 IPR010272 Type VI secretion system, TssF-like IF561_19945 IPR017729 Type VI secretion system, ATPase ClpV1 IF561_19945 IPR019489 Clp ATPase, C-terminal IF561_19945 IPR003593 AAA+ ATPase domain IF561_19945 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19945 IPR036628 Clp, N-terminal domain superfamily IF561_19945 IPR041546 ClpA/ClpB, AAA lid domain IF561_19945 IPR018368 ClpA/B, conserved site 1 IF561_19945 IPR001270 ClpA/B family IF561_19945 IPR003959 ATPase, AAA-type, core IF561_19945 IPR004176 Clp, N-terminal IF561_19955 IPR006531 Gp5 N-terminal IF561_19955 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IF561_19955 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IF561_19955 IPR037026 Vgr protein, OB-fold domain superfamily IF561_19955 IPR010609 Gp5, C-terminal IF561_19970 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_19970 IPR029052 Metallo-dependent phosphatase-like IF561_19970 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain IF561_19970 IPR004593 Nuclease SbcCD subunit D IF561_19970 IPR026843 Nuclease SbcCD subunit D, C-terminal domain IF561_19975 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_19975 IPR038729 Rad50/SbcC-type AAA domain IF561_19995 IPR022272 Lipocalin family conserved site IF561_19995 IPR002446 Lipocalin, bacterial IF561_19995 IPR022271 Lipocalin, ApoD type IF561_19995 IPR012674 Calycin IF561_19995 IPR000566 Lipocalin/cytosolic fatty-acid binding domain IF561_20005 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IF561_20005 IPR011701 Major facilitator superfamily IF561_20005 IPR020846 Major facilitator superfamily domain IF561_20005 IPR036259 MFS transporter superfamily IF561_20005 IPR005829 Sugar transporter, conserved site IF561_20015 IPR018385 C4-dicarboxylate anaerobic carrier-like IF561_20020 IPR024167 Cytochrome c4-like IF561_20020 IPR036909 Cytochrome c-like domain superfamily IF561_20020 IPR009056 Cytochrome c-like domain IF561_20025 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase IF561_20025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_20025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_20025 IPR023603 Threonine aldolase IF561_20025 IPR015424 Pyridoxal phosphate-dependent transferase IF561_20035 IPR003593 AAA+ ATPase domain IF561_20035 IPR011704 ATPase, dynein-related, AAA domain IF561_20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20035 IPR022547 ATPase, RavA, C-terminal IF561_20035 IPR023671 ATPase RavA IF561_20035 IPR041538 ATPase RavA-like, AAA lid domain IF561_20040 IPR008912 Uncharacterised protein family CoxE-like IF561_20040 IPR023481 Uncharacterised protein family ViaA IF561_20040 IPR002035 von Willebrand factor, type A IF561_20040 IPR036465 von Willebrand factor A-like domain superfamily IF561_20055 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20055 IPR000847 Transcription regulator HTH, LysR IF561_20055 IPR005119 LysR, substrate-binding IF561_20055 IPR036390 Winged helix DNA-binding domain superfamily IF561_20060 IPR016164 FAD-linked oxidase-like, C-terminal IF561_20060 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 IF561_20060 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 IF561_20060 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_20060 IPR016166 FAD-binding domain, PCMH-type IF561_20060 IPR036318 FAD-binding, type PCMH-like superfamily IF561_20060 IPR012256 D-lactate dehydrogenase IF561_20060 IPR006094 FAD linked oxidase, N-terminal IF561_20060 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal IF561_20060 IPR016167 FAD-binding, type PCMH, subdomain 1 IF561_20075 IPR000821 Alanine racemase IF561_20075 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_20075 IPR011079 Alanine racemase, C-terminal IF561_20075 IPR001608 Alanine racemase, N-terminal IF561_20075 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site IF561_20075 IPR029066 PLP-binding barrel IF561_20080 IPR003660 HAMP domain IF561_20080 IPR004090 Chemotaxis methyl-accepting receptor IF561_20080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_20095 IPR015237 Alpha-amylase C-terminal, prokaryotic IF561_20095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_20095 IPR013780 Glycosyl hydrolase, all-beta IF561_20095 IPR017853 Glycoside hydrolase superfamily IF561_20095 IPR013776 Alpha-amylase, thermostable IF561_20115 IPR004670 Na+/H+ antiporter NhaA IF561_20115 IPR013766 Thioredoxin domain IF561_20115 IPR036249 Thioredoxin-like superfamily IF561_20115 IPR012336 Thioredoxin-like fold IF561_20115 IPR023171 Na/H antiporter domain superfamily IF561_20150 IPR023459 Transcription elongation factor GreA/GreB family IF561_20150 IPR028625 Regulator of nucleoside diphosphate kinase IF561_20150 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain IF561_20150 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IF561_20150 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IF561_20155 IPR007419 BFD-like [2Fe-2S]-binding domain IF561_20155 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IF561_20155 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal IF561_20155 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily IF561_20155 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IF561_20155 IPR017121 Nitrite reductase [NAD(P)H], large subunit IF561_20155 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB IF561_20155 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IF561_20155 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IF561_20155 IPR023753 FAD/NAD(P)-binding domain IF561_20155 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_20160 IPR017881 Nitrite reductase (NADH) small subunit IF561_20160 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type IF561_20160 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IF561_20165 IPR000292 Formate/nitrite transporter IF561_20165 IPR023271 Aquaporin-like IF561_20165 IPR023999 Formate transporter FocA, putative IF561_20165 IPR024002 Formate/nitrite transporter, conserved site IF561_20170 IPR000878 Tetrapyrrole methylase IF561_20170 IPR035996 Tetrapyrrole methylase superfamily IF561_20170 IPR037115 Sirohaem synthase, dimerisation domain superfamily IF561_20170 IPR014777 Tetrapyrrole methylase, subdomain 1 IF561_20170 IPR014776 Tetrapyrrole methylase, subdomain 2 IF561_20170 IPR012409 Sirohaem synthase IF561_20170 IPR028281 Siroheme synthase, central domain IF561_20170 IPR019478 Sirohaem synthase, dimerisation domain IF561_20170 IPR006367 Sirohaem synthase, N-terminal IF561_20170 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IF561_20170 IPR006366 Uroporphyrin-III C-methyltransferase IF561_20170 IPR036291 NAD(P)-binding domain superfamily IF561_20185 IPR004668 Anaerobic c4-dicarboxylate membrane transporter IF561_20195 IPR039426 Vitamin B12 transporter BtuB-like IF561_20195 IPR012910 TonB-dependent receptor, plug domain IF561_20195 IPR010916 TonB box, conserved site IF561_20195 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_20195 IPR010917 TonB-dependent receptor, conserved site IF561_20195 IPR010105 TonB-dependent siderophore receptor IF561_20195 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_20195 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_20210 IPR020483 Uncharacterised protein family YgbA IF561_20215 IPR002528 Multi antimicrobial extrusion protein IF561_20220 IPR018062 HTH domain AraC-type, conserved site IF561_20220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_20220 IPR003594 Histidine kinase/HSP90-like ATPase IF561_20220 IPR011123 Two component regulator three Y IF561_20220 IPR005467 Histidine kinase domain IF561_20220 IPR011006 CheY-like superfamily IF561_20220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_20220 IPR009057 Homeobox-like domain superfamily IF561_20220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_20220 IPR013783 Immunoglobulin-like fold IF561_20220 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IF561_20220 IPR011110 Two component regulator propeller IF561_20220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_20220 IPR001789 Signal transduction response regulator, receiver domain IF561_20220 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IF561_20220 IPR018060 DNA binding HTH domain, AraC-type IF561_20225 IPR011701 Major facilitator superfamily IF561_20225 IPR023745 MSF-type transporter, YcaD IF561_20225 IPR036259 MFS transporter superfamily IF561_20225 IPR020846 Major facilitator superfamily domain IF561_20230 IPR017937 Thioredoxin, conserved site IF561_20230 IPR013766 Thioredoxin domain IF561_20230 IPR005746 Thioredoxin IF561_20230 IPR036249 Thioredoxin-like superfamily IF561_20235 IPR016039 Thiolase-like IF561_20235 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IF561_20235 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IF561_20235 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IF561_20255 IPR011051 RmlC-like cupin domain superfamily IF561_20255 IPR014710 RmlC-like jelly roll fold IF561_20255 IPR018050 Phosphomannose isomerase, type I, conserved site IF561_20255 IPR016305 Mannose-6-phosphate isomerase IF561_20255 IPR001250 Mannose-6-phosphate isomerase, type I IF561_20260 IPR020846 Major facilitator superfamily domain IF561_20260 IPR000849 Sugar phosphate transporter IF561_20260 IPR011701 Major facilitator superfamily IF561_20260 IPR036259 MFS transporter superfamily IF561_20260 IPR021159 Glycerate/sugar phosphate transporter, conserved site IF561_20265 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IF561_20265 IPR007895 MASE1 IF561_20265 IPR003594 Histidine kinase/HSP90-like ATPase IF561_20265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_20265 IPR005467 Histidine kinase domain IF561_20270 IPR001789 Signal transduction response regulator, receiver domain IF561_20270 IPR000792 Transcription regulator LuxR, C-terminal IF561_20270 IPR011006 CheY-like superfamily IF561_20270 IPR016032 Signal transduction response regulator, C-terminal effector IF561_20275 IPR011701 Major facilitator superfamily IF561_20275 IPR020846 Major facilitator superfamily domain IF561_20275 IPR000849 Sugar phosphate transporter IF561_20275 IPR036259 MFS transporter superfamily IF561_20275 IPR021159 Glycerate/sugar phosphate transporter, conserved site IF561_20280 IPR003786 Sulfur carrier protein FdhD IF561_20280 IPR016193 Cytidine deaminase-like IF561_20285 IPR036390 Winged helix DNA-binding domain superfamily IF561_20285 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20285 IPR000847 Transcription regulator HTH, LysR IF561_20285 IPR005119 LysR, substrate-binding IF561_20290 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_20290 IPR037951 YdeP-like, MopB domain IF561_20290 IPR006656 Molybdopterin oxidoreductase IF561_20290 IPR010046 Oxidoreductase alpha (molybdopterin) subunit IF561_20290 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain IF561_20295 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IF561_20295 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IF561_20295 IPR017758 Coenzyme A disulphide reductase IF561_20295 IPR023536 Coenzyme A disulphide reductase, staphyolococci IF561_20295 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_20295 IPR023753 FAD/NAD(P)-binding domain IF561_20310 IPR007272 Sulphur transport domain IF561_20320 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IF561_20320 IPR001036 Acriflavin resistance protein IF561_20320 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_20325 IPR006143 RND efflux pump, membrane fusion protein IF561_20325 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_20335 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic IF561_20335 IPR001150 Glycine radical domain IF561_20335 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_20335 IPR005144 ATP-cone domain IF561_20340 IPR001989 Radical-activating enzyme, conserved site IF561_20340 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic IF561_20340 IPR007197 Radical SAM IF561_20340 IPR034457 Organic radical-activating enzymes IF561_20340 IPR013785 Aldolase-type TIM barrel IF561_20345 IPR002528 Multi antimicrobial extrusion protein IF561_20350 IPR009057 Homeobox-like domain superfamily IF561_20350 IPR020449 Transcription regulator HTH, AraC- type IF561_20350 IPR029062 Class I glutamine amidotransferase-like IF561_20350 IPR018060 DNA binding HTH domain, AraC-type IF561_20350 IPR018062 HTH domain AraC-type, conserved site IF561_20355 IPR004839 Aminotransferase, class I/classII IF561_20355 IPR000796 Aspartate/other aminotransferase IF561_20355 IPR015424 Pyridoxal phosphate-dependent transferase IF561_20355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_20355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_20360 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX IF561_20360 IPR013651 ATP-grasp fold, RimK-type IF561_20360 IPR013815 ATP-grasp fold, subdomain 1 IF561_20360 IPR021109 Aspartic peptidase domain superfamily IF561_20360 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK IF561_20360 IPR041107 RimK, PreATP-grasp domain IF561_20360 IPR011761 ATP-grasp fold IF561_20370 IPR005220 Bacterial OB-fold IF561_20370 IPR036700 Bacterial OB-fold superfamily IF561_20370 IPR016052 Bacteriophage 933W, L0136 IF561_20375 IPR029062 Class I glutamine amidotransferase-like IF561_20375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20375 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 IF561_20375 IPR004459 Cobyric acid synthase CobQ IF561_20375 IPR011698 CobB/CobQ-like glutamine amidotransferase IF561_20375 IPR017929 CobB/CobQ glutamine amidotransferase IF561_20380 IPR005950 Molybdate ABC transporter, substrate-binding protein IF561_20385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_20385 IPR035906 MetI-like superfamily IF561_20385 IPR011867 Molybdate ABC transporter, permease protein IF561_20390 IPR005116 Transport-associated OB, type 1 IF561_20390 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20390 IPR004606 Molybdenum-pterin binding IF561_20390 IPR011868 Molybdate ABC transporter, ATP-binding protein IF561_20390 IPR008995 Molybdate/tungstate binding, C-terminal IF561_20390 IPR015852 ABC transporter, molybdenum import, ModC IF561_20390 IPR017871 ABC transporter, conserved site IF561_20390 IPR003439 ABC transporter-like IF561_20390 IPR003593 AAA+ ATPase domain IF561_20400 IPR001294 Phytochrome IF561_20400 IPR000160 GGDEF domain IF561_20400 IPR013515 Phytochrome, central region IF561_20400 IPR029016 GAF-like domain superfamily IF561_20400 IPR003018 GAF domain IF561_20400 IPR035919 EAL domain superfamily IF561_20400 IPR001633 EAL domain IF561_20400 IPR016132 Phytochrome chromophore attachment domain IF561_20400 IPR029787 Nucleotide cyclase IF561_20410 IPR029787 Nucleotide cyclase IF561_20410 IPR000160 GGDEF domain IF561_20425 IPR036291 NAD(P)-binding domain superfamily IF561_20425 IPR026255 NAD(P) transhydrogenase, alpha subunit IF561_20425 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal IF561_20425 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IF561_20425 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 IF561_20425 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IF561_20425 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IF561_20430 IPR034300 NADP transhydrogenase beta-like domain IF561_20430 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_20430 IPR012136 NADP transhydrogenase, beta subunit IF561_20440 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20440 IPR039420 Transcriptional regulatory protein WalR-like IF561_20440 IPR001789 Signal transduction response regulator, receiver domain IF561_20440 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_20440 IPR011006 CheY-like superfamily IF561_20455 IPR005371 Uncharacterised protein family UPF0181 IF561_20460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_20460 IPR006015 Universal stress protein A family IF561_20460 IPR006016 UspA IF561_20470 IPR005119 LysR, substrate-binding IF561_20470 IPR000847 Transcription regulator HTH, LysR IF561_20470 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20470 IPR036390 Winged helix DNA-binding domain superfamily IF561_20510 IPR004845 Type II secretion system GspD, conserved site IF561_20510 IPR013356 Type II secretion system GspD IF561_20510 IPR004846 Type II/III secretion system IF561_20510 IPR038591 NolW-like superfamily IF561_20510 IPR005644 NolW-like IF561_20510 IPR001775 GspD/PilQ family IF561_20540 IPR008766 Replication gene A protein IF561_20555 IPR005872 Archaeal/bacterial translation initiation factor SUI1 IF561_20555 IPR001950 SUI1 domain IF561_20555 IPR036877 SUI1 domain superfamily IF561_20565 IPR013815 ATP-grasp fold, subdomain 1 IF561_20565 IPR005905 D-alanine--D-alanine ligase IF561_20565 IPR011095 D-alanine--D-alanine ligase, C-terminal IF561_20565 IPR011127 D-alanine--D-alanine ligase, N-terminal domain IF561_20565 IPR016185 Pre-ATP-grasp domain superfamily IF561_20565 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site IF561_20565 IPR011761 ATP-grasp fold IF561_20575 IPR016181 Acyl-CoA N-acyltransferase IF561_20575 IPR011761 ATP-grasp fold IF561_20575 IPR003781 CoA-binding IF561_20575 IPR036291 NAD(P)-binding domain superfamily IF561_20575 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain IF561_20575 IPR016102 Succinyl-CoA synthetase-like IF561_20575 IPR013815 ATP-grasp fold, subdomain 1 IF561_20575 IPR000182 GNAT domain IF561_20580 IPR036390 Winged helix DNA-binding domain superfamily IF561_20580 IPR005119 LysR, substrate-binding IF561_20580 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20580 IPR000847 Transcription regulator HTH, LysR IF561_20585 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor IF561_20585 IPR012910 TonB-dependent receptor, plug domain IF561_20585 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_20585 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_20585 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_20585 IPR039426 Vitamin B12 transporter BtuB-like IF561_20590 IPR016040 NAD(P)-binding domain IF561_20590 IPR036291 NAD(P)-binding domain superfamily IF561_20590 IPR005886 UDP-glucose 4-epimerase IF561_20595 IPR000160 GGDEF domain IF561_20595 IPR029787 Nucleotide cyclase IF561_20595 IPR001610 PAC motif IF561_20595 IPR000014 PAS domain IF561_20595 IPR000700 PAS-associated, C-terminal IF561_20595 IPR035965 PAS domain superfamily IF561_20595 IPR013655 PAS fold-3 IF561_20595 IPR007895 MASE1 IF561_20595 IPR035919 EAL domain superfamily IF561_20595 IPR013656 PAS fold-4 IF561_20595 IPR001633 EAL domain IF561_20600 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IF561_20600 IPR005501 LamB/YcsF/PxpA-like IF561_20605 IPR010016 KipI family IF561_20605 IPR029000 Cyclophilin-like domain superfamily IF561_20605 IPR003833 Carboxyltransferase domain, subdomain C and D IF561_20610 IPR003778 Carboxyltransferase domain, subdomain A and B IF561_20610 IPR029000 Cyclophilin-like domain superfamily IF561_20620 IPR038766 Membrane component of ABC transporter, predicted IF561_20625 IPR003439 ABC transporter-like IF561_20625 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20625 IPR003593 AAA+ ATPase domain IF561_20625 IPR017871 ABC transporter, conserved site IF561_20630 IPR036514 SGNH hydrolase superfamily IF561_20630 IPR008265 Lipase, GDSL, active site IF561_20630 IPR013830 SGNH hydrolase-type esterase domain IF561_20635 IPR010758 Trans-2-enoyl-CoA reductase IF561_20635 IPR036291 NAD(P)-binding domain superfamily IF561_20635 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative IF561_20635 IPR024906 Enoyl reductase FAD binding domain IF561_20640 IPR001633 EAL domain IF561_20640 IPR000160 GGDEF domain IF561_20640 IPR029787 Nucleotide cyclase IF561_20640 IPR035919 EAL domain superfamily IF561_20640 IPR000014 PAS domain IF561_20640 IPR035965 PAS domain superfamily IF561_20640 IPR005330 MHYT domain IF561_20650 IPR036869 Chaperone J-domain superfamily IF561_20650 IPR001305 Heat shock protein DnaJ, cysteine-rich domain IF561_20650 IPR008971 HSP40/DnaJ peptide-binding IF561_20650 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IF561_20650 IPR001623 DnaJ domain IF561_20650 IPR018253 DnaJ domain, conserved site IF561_20650 IPR002939 Chaperone DnaJ, C-terminal IF561_20650 IPR012724 Chaperone DnaJ IF561_20675 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain IF561_20675 IPR039424 Solute-binding protein family 5 IF561_20675 IPR000914 Solute-binding protein family 5 domain IF561_20675 IPR023767 Transcriptional regulator SgrR IF561_20685 IPR006683 Thioesterase domain IF561_20685 IPR003736 Phenylacetic acid degradation-related domain IF561_20685 IPR029069 HotDog domain superfamily IF561_20700 IPR042117 OMPP1/FadL/TodX superfamily IF561_20700 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IF561_20705 IPR029058 Alpha/Beta hydrolase fold IF561_20705 IPR020009 Extracellular lipase, Pla-1/cef family IF561_20705 IPR025920 Bacterial virulence factor lipase, N-terminal domain IF561_20720 IPR005496 Integral membrane protein TerC IF561_20720 IPR022369 Integral membrane protein TerC, riboswitch-linked IF561_20725 IPR029052 Metallo-dependent phosphatase-like IF561_20725 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_20725 IPR008334 5'-Nucleotidase, C-terminal IF561_20725 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN IF561_20725 IPR006146 5'-Nucleotidase, conserved site IF561_20725 IPR036907 5'-Nucleotidase, C-terminal domain superfamily IF561_20725 IPR006179 5'-Nucleotidase/apyrase IF561_20730 IPR006171 TOPRIM domain IF561_20730 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20730 IPR022602 Protein of unknown function DUF2813 IF561_20730 IPR034139 OLD protein-like, TOPRIM domain IF561_20735 IPR009476 Protein of unknown function DUF1097 IF561_20740 IPR005119 LysR, substrate-binding IF561_20740 IPR036390 Winged helix DNA-binding domain superfamily IF561_20740 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_20740 IPR000847 Transcription regulator HTH, LysR IF561_20745 IPR023999 Formate transporter FocA, putative IF561_20745 IPR024002 Formate/nitrite transporter, conserved site IF561_20745 IPR000292 Formate/nitrite transporter IF561_20745 IPR023271 Aquaporin-like IF561_20750 IPR023480 Uncharacterised protein family UPF0312/YceI IF561_20750 IPR007372 Lipid/polyisoprenoid-binding, YceI-like IF561_20750 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily IF561_20755 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase IF561_20755 IPR016174 Di-haem cytochrome, transmembrane IF561_20770 IPR001633 EAL domain IF561_20770 IPR035919 EAL domain superfamily IF561_20770 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain IF561_20775 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_20775 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20775 IPR011545 DEAD/DEAH box helicase domain IF561_20775 IPR001650 Helicase, C-terminal IF561_20775 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_20775 IPR028622 ATP-dependent RNA helicase RhlE IF561_20775 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_20780 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria IF561_20780 IPR007431 Acyl carrier protein phosphodiesterase IF561_20785 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_20785 IPR029151 Periplasmic sensor-like domain superfamily IF561_20790 IPR036412 HAD-like superfamily IF561_20790 IPR041492 Haloacid dehalogenase-like hydrolase IF561_20790 IPR023214 HAD superfamily IF561_20790 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_20790 IPR037512 Phosphoglycolate phosphatase, prokaryotic IF561_20790 IPR006439 HAD hydrolase, subfamily IA IF561_20795 IPR021800 Domain of unknown function DUF3369 IF561_20795 IPR003607 HD/PDEase domain IF561_20795 IPR037522 HD-GYP domain IF561_20795 IPR001789 Signal transduction response regulator, receiver domain IF561_20795 IPR011006 CheY-like superfamily IF561_20810 IPR029056 Ribokinase-like IF561_20810 IPR011611 Carbohydrate kinase PfkB IF561_20810 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_20815 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20815 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site IF561_20815 IPR000559 Formate-tetrahydrofolate ligase, FTHFS IF561_20820 IPR005835 Nucleotidyl transferase domain IF561_20820 IPR011004 Trimeric LpxA-like superfamily IF561_20820 IPR029044 Nucleotide-diphospho-sugar transferases IF561_20820 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial IF561_20820 IPR005836 ADP-glucose pyrophosphorylase, conserved site IF561_20820 IPR011831 Glucose-1-phosphate adenylyltransferase IF561_20825 IPR009470 Chitinase, C-terminal IF561_20825 IPR017853 Glycoside hydrolase superfamily IF561_20825 IPR001223 Glycoside hydrolase family 18, catalytic domain IF561_20825 IPR029070 Chitinase insertion domain superfamily IF561_20825 IPR011583 Chitinase II IF561_20825 IPR036573 Carbohydrate-binding module superfamily 5/12 IF561_20825 IPR003610 Carbohydrate-binding module family 5/12 IF561_20825 IPR013783 Immunoglobulin-like fold IF561_20830 IPR009057 Homeobox-like domain superfamily IF561_20830 IPR018060 DNA binding HTH domain, AraC-type IF561_20830 IPR009594 Transcription regulator HTH, AraC, N-terminal IF561_20835 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IF561_20835 IPR018211 Alcohol dehydrogenase, iron-type, conserved site IF561_20845 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_20845 IPR001789 Signal transduction response regulator, receiver domain IF561_20845 IPR025944 Sigma-54 interaction domain, conserved site IF561_20845 IPR002197 DNA binding HTH domain, Fis-type IF561_20845 IPR011006 CheY-like superfamily IF561_20845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20845 IPR009057 Homeobox-like domain superfamily IF561_20850 IPR017116 Signal transduction histidine kinase, PgtB IF561_20850 IPR003660 HAMP domain IF561_20850 IPR003594 Histidine kinase/HSP90-like ATPase IF561_20850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_20850 IPR005467 Histidine kinase domain IF561_20850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_20850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_20860 IPR011701 Major facilitator superfamily IF561_20860 IPR021159 Glycerate/sugar phosphate transporter, conserved site IF561_20860 IPR000849 Sugar phosphate transporter IF561_20860 IPR036259 MFS transporter superfamily IF561_20860 IPR020846 Major facilitator superfamily domain IF561_20865 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_20865 IPR040442 Pyruvate kinase-like domain superfamily IF561_20865 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_20865 IPR018209 Pyruvate kinase, active site IF561_20865 IPR015793 Pyruvate kinase, barrel IF561_20865 IPR015795 Pyruvate kinase, C-terminal IF561_20865 IPR036918 Pyruvate kinase, C-terminal domain superfamily IF561_20865 IPR015806 Pyruvate kinase, insert domain superfamily IF561_20865 IPR001697 Pyruvate kinase IF561_20870 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IF561_20870 IPR017871 ABC transporter, conserved site IF561_20870 IPR003439 ABC transporter-like IF561_20870 IPR003593 AAA+ ATPase domain IF561_20870 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_20875 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_20875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_20875 IPR035906 MetI-like superfamily IF561_20880 IPR001320 Ionotropic glutamate receptor IF561_20880 IPR018313 Solute-binding protein family 3, conserved site IF561_20880 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_20880 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter IF561_20885 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_20885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_20885 IPR035906 MetI-like superfamily IF561_20890 IPR035965 PAS domain superfamily IF561_20890 IPR013767 PAS fold IF561_20890 IPR001610 PAC motif IF561_20890 IPR000014 PAS domain IF561_20890 IPR000700 PAS-associated, C-terminal IF561_20890 IPR029787 Nucleotide cyclase IF561_20890 IPR035919 EAL domain superfamily IF561_20890 IPR029016 GAF-like domain superfamily IF561_20890 IPR003018 GAF domain IF561_20890 IPR001633 EAL domain IF561_20890 IPR000160 GGDEF domain IF561_20905 IPR012781 D-fructose-responsive transcription factor IF561_20905 IPR000843 LacI-type HTH domain IF561_20905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_20905 IPR001761 Periplasmic binding protein/LacI sugar binding domain IF561_20905 IPR028082 Periplasmic binding protein-like I IF561_20910 IPR002114 Phosphotransferase system, HPr serine phosphorylation site IF561_20910 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site IF561_20910 IPR016152 Phosphotransferase/anion transporter IF561_20910 IPR002178 PTS EIIA type-2 domain IF561_20910 IPR000032 Phosphocarrier protein HPr-like IF561_20910 IPR035895 HPr-like superfamily IF561_20915 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IF561_20915 IPR017583 Tagatose/fructose phosphokinase IF561_20915 IPR029056 Ribokinase-like IF561_20915 IPR022463 Fructose 1-phosphate kinase IF561_20915 IPR011611 Carbohydrate kinase PfkB IF561_20920 IPR006327 Phosphotransferase system, fructose IIC component IF561_20920 IPR003353 Phosphotransferase system, fructose-specific IIB subunit IF561_20920 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_20920 IPR003352 Phosphotransferase system, EIIC IF561_20920 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_20920 IPR013011 Phosphotransferase system, EIIB component, type 2 IF561_20920 IPR036095 PTS system IIB component-like superfamily IF561_20930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_20930 IPR001036 Acriflavin resistance protein IF561_20950 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal IF561_20950 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IF561_20950 IPR006222 Aminomethyltransferase, folate-binding domain IF561_20950 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain IF561_20950 IPR028896 Aminomethyltransferase-like IF561_20950 IPR022903 Glycine cleavage system T protein, bacteria IF561_20950 IPR006223 Glycine cleavage system T protein IF561_20960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_20960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_20960 IPR001085 Serine hydroxymethyltransferase IF561_20960 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IF561_20960 IPR039429 Serine hydroxymethyltransferase-like domain IF561_20960 IPR015424 Pyridoxal phosphate-dependent transferase IF561_20965 IPR000089 Biotin/lipoyl attachment IF561_20965 IPR011053 Single hybrid motif IF561_20965 IPR017453 Glycine cleavage system H-protein, subgroup IF561_20965 IPR033753 Glycine cleavage system H-protein/Simiate IF561_20965 IPR002930 Glycine cleavage system H-protein IF561_20970 IPR003437 Glycine dehydrogenase (decarboxylating) IF561_20970 IPR020581 Glycine cleavage system P protein IF561_20970 IPR015424 Pyridoxal phosphate-dependent transferase IF561_20970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_20970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_21000 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IF561_21000 IPR029045 ClpP/crotonase-like domain superfamily IF561_21000 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IF561_21000 IPR041010 Acetyl-coA carboxylase zinc finger domain IF561_21000 IPR034733 Acetyl-CoA carboxylase IF561_21005 IPR036390 Winged helix DNA-binding domain superfamily IF561_21005 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21005 IPR000847 Transcription regulator HTH, LysR IF561_21005 IPR005119 LysR, substrate-binding IF561_21010 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IF561_21010 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IF561_21010 IPR029460 DNA polymerase, helix-hairpin-helix motif IF561_21010 IPR024754 DNA polymerase III polC-like, N-terminal domain II IF561_21010 IPR040982 DNA polymerase III alpha subunit finger domain IF561_21010 IPR004013 PHP domain IF561_21010 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_21010 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_21010 IPR012340 Nucleic acid-binding, OB-fold IF561_21010 IPR012337 Ribonuclease H-like superfamily IF561_21010 IPR036397 Ribonuclease H superfamily IF561_21010 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type IF561_21015 IPR003593 AAA+ ATPase domain IF561_21015 IPR011527 ABC transporter type 1, transmembrane domain IF561_21015 IPR036640 ABC transporter type 1, transmembrane domain superfamily IF561_21015 IPR003439 ABC transporter-like IF561_21015 IPR017871 ABC transporter, conserved site IF561_21015 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21035 IPR003187 Phospholipase A1 IF561_21035 IPR036541 Phospholipase A1 superfamily IF561_21045 IPR000551 MerR-type HTH domain IF561_21045 IPR009061 Putative DNA-binding domain superfamily IF561_21045 IPR011789 Cu(I)-responsive transcriptional regulator IF561_21045 IPR015358 Transcription regulator MerR, DNA binding IF561_21050 IPR023635 Peptide deformylase IF561_21050 IPR036821 Peptide deformylase superfamily IF561_21080 IPR000644 CBS domain IF561_21080 IPR006668 Magnesium transporter, MgtE intracellular domain IF561_21080 IPR038076 MgtE, N-terminal domain superfamily IF561_21080 IPR038048 Magnesium transporter MgtE, transmembrane domain IF561_21080 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IF561_21080 IPR006669 Magnesium transporter MgtE IF561_21080 IPR006667 SLC41 divalent cation transporters, integral membrane domain IF561_21100 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_21100 IPR018146 Glyoxalase I, conserved site IF561_21100 IPR004361 Glyoxalase I IF561_21100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_21100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_21105 IPR013785 Aldolase-type TIM barrel IF561_21105 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IF561_21115 IPR002656 Acyltransferase 3 IF561_21115 IPR036514 SGNH hydrolase superfamily IF561_21125 IPR011979 Conserved hypothetical protein CHP02293 IF561_21125 IPR024467 Domain of unknown function DUF2384 IF561_21130 IPR000763 Catalase-peroxidase haem IF561_21130 IPR002016 Haem peroxidase IF561_21130 IPR010255 Haem peroxidase superfamily IF561_21130 IPR019794 Peroxidase, active site IF561_21135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_21135 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_21135 IPR024188 Glutamate synthase large subunit-like protein IF561_21135 IPR002932 Glutamate synthase domain IF561_21135 IPR013785 Aldolase-type TIM barrel IF561_21145 IPR011006 CheY-like superfamily IF561_21145 IPR001789 Signal transduction response regulator, receiver domain IF561_21145 IPR028141 Transcriptional regulator IF561_21145 IPR024187 Signal transduction response regulator, citrate/malate metabolism IF561_21150 IPR039506 SpoOB, alpha-helical domain IF561_21150 IPR005467 Histidine kinase domain IF561_21150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_21150 IPR003594 Histidine kinase/HSP90-like ATPase IF561_21150 IPR000014 PAS domain IF561_21150 IPR035965 PAS domain superfamily IF561_21150 IPR013767 PAS fold IF561_21150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_21150 IPR033463 Single cache domain 3 IF561_21150 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IF561_21150 IPR029151 Periplasmic sensor-like domain superfamily IF561_21155 IPR030676 Citrate carrier CitT-related IF561_21155 IPR001898 Solute carrier family 13 IF561_21160 IPR016161 Aldehyde/histidinol dehydrogenase IF561_21160 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_21160 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IF561_21160 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_21160 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent IF561_21160 IPR015590 Aldehyde dehydrogenase domain IF561_21180 IPR000620 EamA domain IF561_21185 IPR000390 Small multidrug resistance protein family IF561_21190 IPR011096 FTP domain IF561_21190 IPR025711 PepSY domain IF561_21190 IPR007280 Peptidase, C-terminal, archaeal/bacterial IF561_21190 IPR023612 Peptidase M4 IF561_21190 IPR001570 Peptidase M4, C-terminal IF561_21190 IPR013856 Peptidase M4 domain IF561_21190 IPR027268 Peptidase M4/M1, CTD superfamily IF561_21200 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IF561_21200 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IF561_21210 IPR000620 EamA domain IF561_21210 IPR004626 RarD protein IF561_21225 IPR001789 Signal transduction response regulator, receiver domain IF561_21225 IPR024181 Chemotaxis response regulator CheV IF561_21225 IPR002545 CheW-like domain IF561_21225 IPR036061 CheW-like domain superfamily IF561_21225 IPR011006 CheY-like superfamily IF561_21245 IPR000792 Transcription regulator LuxR, C-terminal IF561_21245 IPR001789 Signal transduction response regulator, receiver domain IF561_21245 IPR011006 CheY-like superfamily IF561_21255 IPR029787 Nucleotide cyclase IF561_21255 IPR012292 Globin/Protoglobin IF561_21255 IPR009050 Globin-like superfamily IF561_21255 IPR000160 GGDEF domain IF561_21255 IPR039435 Diguanylate cyclase DosC, globin sensor domain IF561_21260 IPR011006 CheY-like superfamily IF561_21260 IPR016032 Signal transduction response regulator, C-terminal effector IF561_21260 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21260 IPR000792 Transcription regulator LuxR, C-terminal IF561_21260 IPR001789 Signal transduction response regulator, receiver domain IF561_21265 IPR035965 PAS domain superfamily IF561_21265 IPR000014 PAS domain IF561_21265 IPR029787 Nucleotide cyclase IF561_21265 IPR005330 MHYT domain IF561_21265 IPR035919 EAL domain superfamily IF561_21265 IPR001633 EAL domain IF561_21265 IPR000160 GGDEF domain IF561_21270 IPR030856 Sensor histidine kinase RcsC IF561_21270 IPR003594 Histidine kinase/HSP90-like ATPase IF561_21270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_21270 IPR005467 Histidine kinase domain IF561_21270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_21270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_21270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_21270 IPR011006 CheY-like superfamily IF561_21270 IPR038388 RcsC, C-terminal domain superfamily IF561_21270 IPR001789 Signal transduction response regulator, receiver domain IF561_21270 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal IF561_21280 IPR000847 Transcription regulator HTH, LysR IF561_21280 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21280 IPR005119 LysR, substrate-binding IF561_21280 IPR036390 Winged helix DNA-binding domain superfamily IF561_21285 IPR005119 LysR, substrate-binding IF561_21285 IPR000847 Transcription regulator HTH, LysR IF561_21285 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21285 IPR036390 Winged helix DNA-binding domain superfamily IF561_21295 IPR006665 OmpA-like domain IF561_21295 IPR006664 Outer membrane protein, bacterial IF561_21295 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_21295 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_21295 IPR008722 Outer membrane porin F, N-terminal IF561_21295 IPR028974 TSP type-3 repeat IF561_21295 IPR036737 OmpA-like domain superfamily IF561_21330 IPR001482 Type II/IV secretion system protein IF561_21330 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21330 IPR022399 Helicase/secretion neighbourhood ATPase IF561_21345 IPR032789 Pilus formation protein, N-terminal IF561_21345 IPR007055 BON domain IF561_21345 IPR001775 GspD/PilQ family IF561_21345 IPR014004 Transport-associated and nodulation domain, bacteria IF561_21345 IPR004846 Type II/III secretion system IF561_21365 IPR000847 Transcription regulator HTH, LysR IF561_21365 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21365 IPR036390 Winged helix DNA-binding domain superfamily IF561_21365 IPR005119 LysR, substrate-binding IF561_21365 IPR020890 Transcription regulator HTH, HdfR IF561_21370 IPR020449 Transcription regulator HTH, AraC- type IF561_21370 IPR018062 HTH domain AraC-type, conserved site IF561_21370 IPR018060 DNA binding HTH domain, AraC-type IF561_21370 IPR009057 Homeobox-like domain superfamily IF561_21380 IPR007280 Peptidase, C-terminal, archaeal/bacterial IF561_21380 IPR002169 Peptidase M9A/M9B, collagenase, bacterial IF561_21380 IPR013661 Peptidase M9, collagenase, N-terminal domain IF561_21390 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IF561_21390 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily IF561_21390 IPR019991 GTP-binding protein, ribosome biogenesis IF561_21390 IPR006073 GTP binding domain IF561_21390 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21390 IPR016478 GTPase, MTG1 IF561_21395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_21395 IPR015424 Pyridoxal phosphate-dependent transferase IF561_21395 IPR004839 Aminotransferase, class I/classII IF561_21395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_21400 IPR003594 Histidine kinase/HSP90-like ATPase IF561_21400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_21400 IPR005467 Histidine kinase domain IF561_21400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_21400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_21400 IPR001789 Signal transduction response regulator, receiver domain IF561_21400 IPR011006 CheY-like superfamily IF561_21400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_21410 IPR016181 Acyl-CoA N-acyltransferase IF561_21410 IPR000905 Gcp-like domain IF561_21410 IPR000182 GNAT domain IF561_21410 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IF561_21410 IPR006464 N-acetyltransferase RimI/Ard1 IF561_21420 IPR004669 C4-dicarboxylate anaerobic carrier IF561_21420 IPR018385 C4-dicarboxylate anaerobic carrier-like IF561_21425 IPR023353 LemA-like domain superfamily IF561_21425 IPR007156 LemA IF561_21430 IPR022919 Peptidase M48, protease HtpX, putative IF561_21430 IPR001915 Peptidase M48 IF561_21445 IPR033315 Fanconi-associated nuclease 1-like IF561_21445 IPR040603 Fanconi-associated nuclease 1, SAP domain IF561_21445 IPR014883 VRR-NUC domain IF561_21445 IPR011856 tRNA endonuclease-like domain superfamily IF561_21455 IPR023885 4Fe4S-binding SPASM domain IF561_21455 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme IF561_21455 IPR007197 Radical SAM IF561_21455 IPR013785 Aldolase-type TIM barrel IF561_21470 IPR036700 Bacterial OB-fold superfamily IF561_21470 IPR005220 Bacterial OB-fold IF561_21470 IPR016052 Bacteriophage 933W, L0136 IF561_21475 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IF561_21475 IPR022433 Lipid kinase YegS IF561_21475 IPR001206 Diacylglycerol kinase, catalytic domain IF561_21475 IPR005218 Diacylglycerol/lipid kinase IF561_21475 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IF561_21480 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21480 IPR000847 Transcription regulator HTH, LysR IF561_21480 IPR005119 LysR, substrate-binding IF561_21480 IPR036390 Winged helix DNA-binding domain superfamily IF561_21485 IPR016192 APOBEC/CMP deaminase, zinc-binding IF561_21485 IPR016193 Cytidine deaminase-like IF561_21485 IPR004794 Riboflavin biosynthesis protein RibD IF561_21485 IPR002125 Cytidine and deoxycytidylate deaminase domain IF561_21500 IPR033881 von Willebrand factor domain BatA-type IF561_21500 IPR002035 von Willebrand factor, type A IF561_21500 IPR036465 von Willebrand factor A-like domain superfamily IF561_21515 IPR041628 ChlI/MoxR, AAA lid domain IF561_21515 IPR011703 ATPase, AAA-3 IF561_21515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21520 IPR007197 Radical SAM IF561_21520 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme IF561_21520 IPR013785 Aldolase-type TIM barrel IF561_21520 IPR023885 4Fe4S-binding SPASM domain IF561_21525 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_21525 IPR024607 Sulfatase, conserved site IF561_21525 IPR000917 Sulfatase, N-terminal IF561_21530 IPR036390 Winged helix DNA-binding domain superfamily IF561_21530 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21530 IPR000847 Transcription regulator HTH, LysR IF561_21530 IPR005119 LysR, substrate-binding IF561_21540 IPR024607 Sulfatase, conserved site IF561_21540 IPR000917 Sulfatase, N-terminal IF561_21540 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_21545 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_21545 IPR032158 Domain of unknown function DUF4994 IF561_21545 IPR024607 Sulfatase, conserved site IF561_21545 IPR000917 Sulfatase, N-terminal IF561_21550 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_21550 IPR011006 CheY-like superfamily IF561_21550 IPR001789 Signal transduction response regulator, receiver domain IF561_21550 IPR039420 Transcriptional regulatory protein WalR-like IF561_21550 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_21565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_21565 IPR005467 Histidine kinase domain IF561_21565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_21565 IPR003594 Histidine kinase/HSP90-like ATPase IF561_21565 IPR003660 HAMP domain IF561_21565 IPR011006 CheY-like superfamily IF561_21565 IPR036641 HPT domain superfamily IF561_21565 IPR037952 Sensor histidine kinase TorS, sensor domain IF561_21565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_21565 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IF561_21565 IPR001789 Signal transduction response regulator, receiver domain IF561_21565 IPR038188 TorS, sensor domain superfamily IF561_21570 IPR014301 TMAO reductase system, periplasmic protein TorT IF561_21570 IPR001761 Periplasmic binding protein/LacI sugar binding domain IF561_21570 IPR028082 Periplasmic binding protein-like I IF561_21575 IPR036914 Methylglyoxal synthase-like domain superfamily IF561_21575 IPR011607 Methylglyoxal synthase-like domain IF561_21575 IPR018148 Methylglyoxal synthase, active site IF561_21575 IPR004363 Methylglyoxal synthase IF561_21580 IPR014016 UvrD-like helicase, ATP-binding domain IF561_21580 IPR022161 DNA helicase IV, N-terminal domain IF561_21580 IPR014017 UvrD-like DNA helicase, C-terminal IF561_21580 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21580 IPR000212 DNA helicase, UvrD/REP type IF561_21580 IPR034739 UvrD/AddA helicase, N-terminal IF561_21585 IPR032692 Integral membrane protein YccS, N-terminal IF561_21585 IPR010019 Integral membrane protein, YccS IF561_21585 IPR010020 Integral membrane protein, YccS/YhfK IF561_21615 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_21615 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_21615 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor IF561_21615 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_21615 IPR039426 Vitamin B12 transporter BtuB-like IF561_21615 IPR012910 TonB-dependent receptor, plug domain IF561_21625 IPR000551 MerR-type HTH domain IF561_21625 IPR009061 Putative DNA-binding domain superfamily IF561_21625 IPR011789 Cu(I)-responsive transcriptional regulator IF561_21630 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21630 IPR017871 ABC transporter, conserved site IF561_21630 IPR003593 AAA+ ATPase domain IF561_21630 IPR003439 ABC transporter-like IF561_21635 IPR037294 ABC transporter, BtuC-like IF561_21635 IPR000522 ABC transporter, permease protein, BtuC-like IF561_21640 IPR037294 ABC transporter, BtuC-like IF561_21640 IPR000522 ABC transporter, permease protein, BtuC-like IF561_21645 IPR033870 FatB domain IF561_21645 IPR002491 ABC transporter periplasmic binding domain IF561_21665 IPR007410 Copper chaperone PCuAC IF561_21665 IPR036182 Copper chaperone PCuAC superfamily IF561_21670 IPR018181 Heat shock protein 70, conserved site IF561_21670 IPR013126 Heat shock protein 70 family IF561_21670 IPR042054 YegD-like IF561_21685 IPR001017 Dehydrogenase, E1 component IF561_21685 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha IF561_21685 IPR029061 Thiamin diphosphate-binding fold IF561_21690 IPR033248 Transketolase, C-terminal domain IF561_21690 IPR029061 Thiamin diphosphate-binding fold IF561_21690 IPR005475 Transketolase-like, pyrimidine-binding domain IF561_21690 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IF561_21695 IPR036625 E3-binding domain superfamily IF561_21695 IPR004167 Peripheral subunit-binding domain IF561_21695 IPR011053 Single hybrid motif IF561_21695 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IF561_21695 IPR000089 Biotin/lipoyl attachment IF561_21695 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IF561_21695 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IF561_21700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_21700 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_21700 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase IF561_21705 IPR010987 Glutathione S-transferase, C-terminal-like IF561_21705 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IF561_21705 IPR040079 Glutathione Transferase family IF561_21705 IPR004045 Glutathione S-transferase, N-terminal IF561_21705 IPR004046 Glutathione S-transferase, C-terminal IF561_21705 IPR036249 Thioredoxin-like superfamily IF561_21705 IPR034341 Stringent starvation protein A, N-terminal IF561_21710 IPR005119 LysR, substrate-binding IF561_21710 IPR000847 Transcription regulator HTH, LysR IF561_21710 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21710 IPR036390 Winged helix DNA-binding domain superfamily IF561_21720 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_21720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_21720 IPR035906 MetI-like superfamily IF561_21725 IPR035906 MetI-like superfamily IF561_21725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_21725 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IF561_21730 IPR001320 Ionotropic glutamate receptor IF561_21730 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IF561_21730 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter IF561_21730 IPR018313 Solute-binding protein family 3, conserved site IF561_21735 IPR003593 AAA+ ATPase domain IF561_21735 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IF561_21735 IPR003439 ABC transporter-like IF561_21735 IPR017871 ABC transporter, conserved site IF561_21735 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21740 IPR012951 Berberine/berberine-like IF561_21740 IPR006093 Oxygen oxidoreductase covalent FAD-binding site IF561_21740 IPR006094 FAD linked oxidase, N-terminal IF561_21740 IPR016164 FAD-linked oxidase-like, C-terminal IF561_21740 IPR016166 FAD-binding domain, PCMH-type IF561_21740 IPR036318 FAD-binding, type PCMH-like superfamily IF561_21740 IPR016167 FAD-binding, type PCMH, subdomain 1 IF561_21740 IPR016169 FAD-binding, type PCMH, subdomain 2 IF561_21745 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IF561_21745 IPR023663 NADPH dehydrogenase IF561_21745 IPR013785 Aldolase-type TIM barrel IF561_21755 IPR000537 UbiA prenyltransferase family IF561_21755 IPR006369 Protohaem IX farnesyltransferase IF561_21755 IPR030470 UbiA prenyltransferase conserved site IF561_21765 IPR033946 Ubiquinol oxidase subunit III domain IF561_21765 IPR014206 Cytochrome o ubiquinol oxidase, subunit III IF561_21765 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IF561_21765 IPR024791 Cytochrome c oxidase subunit III IF561_21765 IPR000298 Cytochrome c oxidase subunit III-like IF561_21765 IPR035973 Cytochrome c oxidase subunit III-like superfamily IF561_21770 IPR014207 Cytochrome o ubiquinol oxidase, subunit I IF561_21770 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IF561_21770 IPR000883 Cytochrome c oxidase subunit I IF561_21770 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IF561_21770 IPR023616 Cytochrome c oxidase-like, subunit I domain IF561_21775 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IF561_21775 IPR002429 Cytochrome c oxidase subunit II-like C-terminal IF561_21775 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain IF561_21775 IPR008972 Cupredoxin IF561_21775 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IF561_21775 IPR006333 Cytochrome o ubiquinol oxidase subunit II IF561_21775 IPR010514 COX aromatic rich motif IF561_21780 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_21780 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_21780 IPR036291 NAD(P)-binding domain superfamily IF561_21780 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IF561_21785 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain IF561_21785 IPR036291 NAD(P)-binding domain superfamily IF561_21785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IF561_21785 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IF561_21785 IPR011548 3-hydroxyisobutyrate dehydrogenase IF561_21785 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site IF561_21785 IPR015815 3-hydroxyisobutyrate dehydrogenase-related IF561_21785 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IF561_21790 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_21790 IPR029045 ClpP/crotonase-like domain superfamily IF561_21790 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_21790 IPR001753 Enoyl-CoA hydratase/isomerase IF561_21795 IPR001753 Enoyl-CoA hydratase/isomerase IF561_21795 IPR029045 ClpP/crotonase-like domain superfamily IF561_21795 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_21795 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_21800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_21800 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_21800 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_21800 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_21800 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_21800 IPR006089 Acyl-CoA dehydrogenase, conserved site IF561_21800 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_21805 IPR016161 Aldehyde/histidinol dehydrogenase IF561_21805 IPR016160 Aldehyde dehydrogenase, cysteine active site IF561_21805 IPR016162 Aldehyde dehydrogenase, N-terminal IF561_21805 IPR015590 Aldehyde dehydrogenase domain IF561_21805 IPR010061 Methylmalonate-semialdehyde dehydrogenase IF561_21805 IPR016163 Aldehyde dehydrogenase, C-terminal IF561_21810 IPR020616 Thiolase, N-terminal IF561_21810 IPR020613 Thiolase, conserved site IF561_21810 IPR020610 Thiolase, active site IF561_21810 IPR016039 Thiolase-like IF561_21810 IPR002155 Thiolase IF561_21810 IPR020617 Thiolase, C-terminal IF561_21810 IPR020615 Thiolase, acyl-enzyme intermediate active site IF561_21815 IPR015358 Transcription regulator MerR, DNA binding IF561_21815 IPR000551 MerR-type HTH domain IF561_21815 IPR009061 Putative DNA-binding domain superfamily IF561_21815 IPR011789 Cu(I)-responsive transcriptional regulator IF561_21820 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IF561_21820 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IF561_21820 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IF561_21820 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IF561_21820 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IF561_21820 IPR006089 Acyl-CoA dehydrogenase, conserved site IF561_21820 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IF561_21825 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IF561_21825 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IF561_21825 IPR029045 ClpP/crotonase-like domain superfamily IF561_21825 IPR034733 Acetyl-CoA carboxylase IF561_21830 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IF561_21830 IPR001753 Enoyl-CoA hydratase/isomerase IF561_21830 IPR014748 Enoyl-CoA hydratase, C-terminal IF561_21830 IPR029045 ClpP/crotonase-like domain superfamily IF561_21835 IPR000891 Pyruvate carboxyltransferase IF561_21835 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site IF561_21835 IPR013785 Aldolase-type TIM barrel IF561_21840 IPR019275 Protein of unknown function DUF2301 IF561_21850 IPR013655 PAS fold-3 IF561_21850 IPR035965 PAS domain superfamily IF561_21850 IPR000700 PAS-associated, C-terminal IF561_21850 IPR000014 PAS domain IF561_21850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_21850 IPR004090 Chemotaxis methyl-accepting receptor IF561_21850 IPR001610 PAC motif IF561_21855 IPR004372 Acetate/propionate kinase IF561_21855 IPR000890 Aliphatic acid kinase, short-chain IF561_21855 IPR023865 Aliphatic acid kinase, short-chain, conserved site IF561_21860 IPR001633 EAL domain IF561_21860 IPR035919 EAL domain superfamily IF561_21860 IPR000160 GGDEF domain IF561_21860 IPR029787 Nucleotide cyclase IF561_21860 IPR000014 PAS domain IF561_21860 IPR035965 PAS domain superfamily IF561_21865 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_21865 IPR001650 Helicase, C-terminal IF561_21865 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_21865 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IF561_21865 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_21865 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21865 IPR011545 DEAD/DEAH box helicase domain IF561_21865 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain IF561_21865 IPR034415 CsdA, RNA recognition motif IF561_21865 IPR028618 ATP-dependent RNA helicase DeaD IF561_21870 IPR004476 Ribonuclease II/ribonuclease R IF561_21870 IPR011129 Cold shock domain IF561_21870 IPR013223 Ribonuclease B, N-terminal OB domain IF561_21870 IPR011804 Ribonuclease II IF561_21870 IPR001900 Ribonuclease II/R IF561_21870 IPR022966 Ribonuclease II/R, conserved site IF561_21870 IPR003029 S1 domain IF561_21870 IPR012340 Nucleic acid-binding, OB-fold IF561_21875 IPR018062 HTH domain AraC-type, conserved site IF561_21875 IPR018060 DNA binding HTH domain, AraC-type IF561_21875 IPR009057 Homeobox-like domain superfamily IF561_21875 IPR020449 Transcription regulator HTH, AraC- type IF561_21885 IPR024370 PBP domain IF561_21890 IPR029069 HotDog domain superfamily IF561_21890 IPR002539 MaoC-like dehydratase domain IF561_21890 IPR039375 Nodulation protein N-like IF561_21900 IPR005119 LysR, substrate-binding IF561_21900 IPR000847 Transcription regulator HTH, LysR IF561_21900 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21900 IPR036390 Winged helix DNA-binding domain superfamily IF561_21905 IPR023885 4Fe4S-binding SPASM domain IF561_21905 IPR013785 Aldolase-type TIM barrel IF561_21905 IPR007197 Radical SAM IF561_21905 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme IF561_21910 IPR000917 Sulfatase, N-terminal IF561_21910 IPR024607 Sulfatase, conserved site IF561_21910 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_21915 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_21915 IPR036390 Winged helix DNA-binding domain superfamily IF561_21915 IPR005119 LysR, substrate-binding IF561_21915 IPR000847 Transcription regulator HTH, LysR IF561_21925 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_21925 IPR003660 HAMP domain IF561_21925 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_21925 IPR000727 Target SNARE coiled-coil homology domain IF561_21925 IPR004090 Chemotaxis methyl-accepting receptor IF561_21930 IPR003593 AAA+ ATPase domain IF561_21930 IPR003439 ABC transporter-like IF561_21930 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21935 IPR035919 EAL domain superfamily IF561_21935 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain IF561_21935 IPR001633 EAL domain IF561_21955 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_21955 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21955 IPR001650 Helicase, C-terminal IF561_21955 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_21955 IPR028622 ATP-dependent RNA helicase RhlE IF561_21955 IPR011545 DEAD/DEAH box helicase domain IF561_21955 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_21960 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IF561_21960 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21960 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IF561_21970 IPR033693 Pyroglutamyl peptidase I, Glu active site IF561_21970 IPR000816 Peptidase C15, pyroglutamyl peptidase I IF561_21970 IPR029762 Pyroglutamyl peptidase I, bacterial-type IF561_21970 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily IF561_21970 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like IF561_21970 IPR033694 Pyroglutamyl peptidase I, Cys active site IF561_21980 IPR001926 Pyridoxal-phosphate dependent enzyme IF561_21980 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IF561_21980 IPR023026 Tryptophan synthase beta chain/beta chain-like IF561_21980 IPR006653 Tryptophan synthase, beta chain, conserved site IF561_21980 IPR006654 Tryptophan synthase, beta chain IF561_21985 IPR018668 DNA-binding protein VF530-like IF561_21985 IPR036361 SAP domain superfamily IF561_21990 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_21990 IPR001650 Helicase, C-terminal IF561_21990 IPR011545 DEAD/DEAH box helicase domain IF561_21990 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_21990 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_21990 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_21990 IPR028622 ATP-dependent RNA helicase RhlE IF561_21995 IPR024530 Putative quorum-sensing-regulated virulence factor IF561_22015 IPR001533 Pterin 4 alpha carbinolamine dehydratase IF561_22015 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily IF561_22020 IPR019774 Aromatic amino acid hydroxylase, C-terminal IF561_22020 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily IF561_22020 IPR036951 Aromatic amino acid hydroxylase superfamily IF561_22020 IPR001273 Aromatic amino acid hydroxylase IF561_22020 IPR005960 Phenylalanine-4-hydroxylase, monomeric form IF561_22020 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site IF561_22025 IPR005914 Acetoacetyl-CoA synthase IF561_22025 IPR025110 AMP-binding enzyme, C-terminal domain IF561_22025 IPR020845 AMP-binding, conserved site IF561_22025 IPR042099 AMP-dependent synthetase-like superfamily IF561_22025 IPR000873 AMP-dependent synthetase/ligase IF561_22030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_22030 IPR010233 Ubiquinone biosynthesis O-methyltransferase IF561_22035 IPR036390 Winged helix DNA-binding domain superfamily IF561_22035 IPR005119 LysR, substrate-binding IF561_22035 IPR000847 Transcription regulator HTH, LysR IF561_22035 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22060 IPR000620 EamA domain IF561_22070 IPR026041 Glyoxalase ElbB IF561_22070 IPR029062 Class I glutamine amidotransferase-like IF561_22075 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IF561_22075 IPR018211 Alcohol dehydrogenase, iron-type, conserved site IF561_22075 IPR039697 Iron-type alcohol dehydrogenase-like IF561_22080 IPR012938 Glucose/Sorbosone dehydrogenase IF561_22080 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase IF561_22080 IPR011042 Six-bladed beta-propeller, TolB-like IF561_22090 IPR008331 Ferritin/DPS protein domain IF561_22090 IPR009078 Ferritin-like superfamily IF561_22090 IPR012347 Ferritin-like IF561_22090 IPR002177 DNA-binding protein Dps IF561_22090 IPR023188 DNA-binding protein Dps, conserved site IF561_22095 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_22095 IPR003660 HAMP domain IF561_22095 IPR004090 Chemotaxis methyl-accepting receptor IF561_22095 IPR033480 Single Cache domain 2 IF561_22105 IPR003439 ABC transporter-like IF561_22105 IPR003838 ABC transporter permease protein domain IF561_22105 IPR017871 ABC transporter, conserved site IF561_22105 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_22105 IPR025857 MacB-like periplasmic core domain IF561_22105 IPR003593 AAA+ ATPase domain IF561_22105 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22110 IPR003593 AAA+ ATPase domain IF561_22110 IPR003838 ABC transporter permease protein domain IF561_22110 IPR003439 ABC transporter-like IF561_22110 IPR017871 ABC transporter, conserved site IF561_22110 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_22110 IPR025857 MacB-like periplasmic core domain IF561_22110 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22125 IPR000160 GGDEF domain IF561_22125 IPR029787 Nucleotide cyclase IF561_22130 IPR035965 PAS domain superfamily IF561_22130 IPR013655 PAS fold-3 IF561_22130 IPR004090 Chemotaxis methyl-accepting receptor IF561_22130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_22130 IPR001610 PAC motif IF561_22130 IPR000014 PAS domain IF561_22130 IPR000700 PAS-associated, C-terminal IF561_22135 IPR005589 Alternative ribosome-rescue factor A IF561_22140 IPR012340 Nucleic acid-binding, OB-fold IF561_22140 IPR012156 Cold shock, CspA IF561_22140 IPR011129 Cold shock domain IF561_22140 IPR019844 Cold-shock (CSD) domain IF561_22140 IPR002059 Cold-shock protein, DNA-binding IF561_22170 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily IF561_22170 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal IF561_22170 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IF561_22175 IPR006369 Protohaem IX farnesyltransferase IF561_22175 IPR030470 UbiA prenyltransferase conserved site IF561_22175 IPR000537 UbiA prenyltransferase family IF561_22180 IPR023754 Heme A synthase, type 2 IF561_22180 IPR003780 COX15/CtaA family IF561_22200 IPR000298 Cytochrome c oxidase subunit III-like IF561_22200 IPR035973 Cytochrome c oxidase subunit III-like superfamily IF561_22200 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IF561_22200 IPR024791 Cytochrome c oxidase subunit III IF561_22200 IPR033945 Cytochrome c oxidase subunit III domain IF561_22205 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 IF561_22205 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily IF561_22210 IPR023616 Cytochrome c oxidase-like, subunit I domain IF561_22210 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IF561_22210 IPR000883 Cytochrome c oxidase subunit I IF561_22210 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IF561_22210 IPR033944 Cytochrome c oxidase subunit I domain IF561_22210 IPR014241 Cytochrome c oxidase, subunit I bacterial type IF561_22215 IPR005728 Rickettsial palindromic element IF561_22215 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IF561_22215 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IF561_22215 IPR014222 Cytochrome c oxidase, subunit II IF561_22215 IPR001505 Copper centre Cu(A) IF561_22215 IPR008972 Cupredoxin IF561_22215 IPR002429 Cytochrome c oxidase subunit II-like C-terminal IF561_22215 IPR034210 Cytochrome c oxidase subunit 2, C-terminal IF561_22220 IPR016066 Alpha-D-phosphohexomutase, conserved site IF561_22220 IPR005841 Alpha-D-phosphohexomutase superfamily IF561_22220 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IF561_22220 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IF561_22220 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IF561_22220 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IF561_22220 IPR005843 Alpha-D-phosphohexomutase, C-terminal IF561_22220 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IF561_22230 IPR001123 Amino acid exporter protein, LeuE-type IF561_22230 IPR004778 Homoserine/Threonine efflux protein IF561_22235 IPR009057 Homeobox-like domain superfamily IF561_22235 IPR018060 DNA binding HTH domain, AraC-type IF561_22235 IPR020449 Transcription regulator HTH, AraC- type IF561_22250 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily IF561_22250 IPR011234 Fumarylacetoacetase-like, C-terminal IF561_22260 IPR023614 Porin domain superfamily IF561_22260 IPR013793 Porin, Gram-negative type, conserved site IF561_22260 IPR001702 Porin, Gram-negative type IF561_22260 IPR001897 Porin, gammaproteobacterial IF561_22260 IPR033900 Porin domain, Gram-negative type IF561_22265 IPR000620 EamA domain IF561_22270 IPR036249 Thioredoxin-like superfamily IF561_22270 IPR011900 Glutaredoxin, GrxC IF561_22270 IPR014025 Glutaredoxin subgroup IF561_22270 IPR002109 Glutaredoxin IF561_22270 IPR011767 Glutaredoxin active site IF561_22280 IPR011701 Major facilitator superfamily IF561_22280 IPR004734 Multidrug resistance protein IF561_22280 IPR036259 MFS transporter superfamily IF561_22280 IPR020846 Major facilitator superfamily domain IF561_22285 IPR000847 Transcription regulator HTH, LysR IF561_22285 IPR005119 LysR, substrate-binding IF561_22285 IPR036390 Winged helix DNA-binding domain superfamily IF561_22285 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22290 IPR000014 PAS domain IF561_22290 IPR035965 PAS domain superfamily IF561_22290 IPR013656 PAS fold-4 IF561_22290 IPR013655 PAS fold-3 IF561_22290 IPR000700 PAS-associated, C-terminal IF561_22290 IPR001610 PAC motif IF561_22290 IPR035919 EAL domain superfamily IF561_22290 IPR000160 GGDEF domain IF561_22290 IPR001633 EAL domain IF561_22290 IPR029787 Nucleotide cyclase IF561_22295 IPR016047 Peptidase M23 IF561_22295 IPR013731 Opacity-associated protein A, N-terminal IF561_22295 IPR011055 Duplicated hybrid motif IF561_22295 IPR018392 LysM domain IF561_22315 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_22320 IPR000727 Target SNARE coiled-coil homology domain IF561_22320 IPR029151 Periplasmic sensor-like domain superfamily IF561_22320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_22320 IPR033479 Double Cache domain 1 IF561_22320 IPR004090 Chemotaxis methyl-accepting receptor IF561_22320 IPR003660 HAMP domain IF561_22330 IPR018227 Amino acid/polyamine transporter 2 IF561_22330 IPR013059 Tryptophan/tyrosine transporter IF561_22350 IPR023710 Probable phosphatase YcdX IF561_22350 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_22350 IPR016195 Polymerase/histidinol phosphatase-like IF561_22355 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22365 IPR013154 Alcohol dehydrogenase, N-terminal IF561_22365 IPR011032 GroES-like superfamily IF561_22365 IPR013149 Alcohol dehydrogenase, C-terminal IF561_22365 IPR036291 NAD(P)-binding domain superfamily IF561_22370 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC IF561_22370 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_22370 IPR003352 Phosphotransferase system, EIIC IF561_22370 IPR036095 PTS system IIB component-like superfamily IF561_22370 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IF561_22370 IPR013011 Phosphotransferase system, EIIB component, type 2 IF561_22370 IPR029503 Phosphotransferase system EIIB component, mannitol-specific IF561_22375 IPR016152 Phosphotransferase/anion transporter IF561_22375 IPR002178 PTS EIIA type-2 domain IF561_22390 IPR038770 Sodium/solute symporter superfamily IF561_22390 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 IF561_22390 IPR004706 Arsenical-resistance protein Acr3 IF561_22400 IPR008914 Phosphatidylethanolamine-binding protein IF561_22400 IPR005247 YbhB/YbcL IF561_22400 IPR036610 PEBP-like superfamily IF561_22405 IPR003719 Phenazine biosynthesis PhzF protein IF561_22410 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily IF561_22410 IPR019405 Lactonase, 7-bladed beta propeller IF561_22410 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IF561_22415 IPR004090 Chemotaxis methyl-accepting receptor IF561_22415 IPR003660 HAMP domain IF561_22415 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_22425 IPR003593 AAA+ ATPase domain IF561_22425 IPR017871 ABC transporter, conserved site IF561_22425 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22425 IPR003439 ABC transporter-like IF561_22430 IPR000412 ABC-2 transporter IF561_22445 IPR009010 Aspartate decarboxylase-like domain superfamily IF561_22445 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_22445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IF561_22445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IF561_22445 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding IF561_22445 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_22445 IPR006656 Molybdopterin oxidoreductase IF561_22445 IPR006657 Molybdopterin dinucleotide-binding domain IF561_22445 IPR006478 Formate dehydrogenase, alpha subunit IF561_22445 IPR041924 Formate dehydrogenase H, N-terminal IF561_22445 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IF561_22465 IPR001036 Acriflavin resistance protein IF561_22465 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA IF561_22465 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_22480 IPR012338 Beta-lactamase/transpeptidase-like IF561_22480 IPR000871 Beta-lactamase, class-A IF561_22480 IPR023650 Beta-lactamase, class-A active site IF561_22485 IPR029787 Nucleotide cyclase IF561_22485 IPR000160 GGDEF domain IF561_22495 IPR016181 Acyl-CoA N-acyltransferase IF561_22495 IPR000182 GNAT domain IF561_22505 IPR042117 OMPP1/FadL/TodX superfamily IF561_22505 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IF561_22510 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_22510 IPR001036 Acriflavin resistance protein IF561_22510 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IF561_22515 IPR022824 Multidrug resistance protein MdtA IF561_22515 IPR006143 RND efflux pump, membrane fusion protein IF561_22515 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_22525 IPR029058 Alpha/Beta hydrolase fold IF561_22525 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IF561_22525 IPR002470 Peptidase S9A, prolyl oligopeptidase IF561_22525 IPR023302 Peptidase S9A, N-terminal domain IF561_22525 IPR002471 Peptidase S9, serine active site IF561_22530 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22530 IPR017871 ABC transporter, conserved site IF561_22530 IPR003439 ABC transporter-like IF561_22530 IPR032781 ABC-transporter extension domain IF561_22530 IPR032524 ABC transporter Uup, C-terminal IF561_22530 IPR003593 AAA+ ATPase domain IF561_22530 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IF561_22535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_22535 IPR006015 Universal stress protein A family IF561_22535 IPR006016 UspA IF561_22540 IPR029039 Flavoprotein-like superfamily IF561_22540 IPR003680 Flavodoxin-like fold IF561_22545 IPR036291 NAD(P)-binding domain superfamily IF561_22545 IPR038770 Sodium/solute symporter superfamily IF561_22545 IPR003148 Regulator of K+ conductance, N-terminal IF561_22545 IPR023941 Glutathione-regulated potassium-efflux system protein KefC IF561_22545 IPR004771 K+/H+ exchanger IF561_22545 IPR006036 Potassium uptake protein TrkA IF561_22545 IPR006153 Cation/H+ exchanger IF561_22560 IPR006046 Alpha amylase IF561_22560 IPR017853 Glycoside hydrolase superfamily IF561_22560 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IF561_22570 IPR002169 Peptidase M9A/M9B, collagenase, bacterial IF561_22570 IPR007280 Peptidase, C-terminal, archaeal/bacterial IF561_22570 IPR013661 Peptidase M9, collagenase, N-terminal domain IF561_22585 IPR036390 Winged helix DNA-binding domain superfamily IF561_22585 IPR000847 Transcription regulator HTH, LysR IF561_22585 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22585 IPR005119 LysR, substrate-binding IF561_22590 IPR002177 DNA-binding protein Dps IF561_22590 IPR023188 DNA-binding protein Dps, conserved site IF561_22590 IPR012347 Ferritin-like IF561_22590 IPR009078 Ferritin-like superfamily IF561_22590 IPR008331 Ferritin/DPS protein domain IF561_22595 IPR010255 Haem peroxidase superfamily IF561_22595 IPR002016 Haem peroxidase IF561_22595 IPR000763 Catalase-peroxidase haem IF561_22595 IPR019794 Peroxidase, active site IF561_22615 IPR036852 Peptidase S8/S53 domain superfamily IF561_22615 IPR023827 Peptidase S8, subtilisin, Asp-active site IF561_22615 IPR022398 Peptidase S8, subtilisin, His-active site IF561_22615 IPR023828 Peptidase S8, subtilisin, Ser-active site IF561_22615 IPR015500 Peptidase S8, subtilisin-related IF561_22615 IPR034084 Thermitase-like, domain IF561_22615 IPR000209 Peptidase S8/S53 domain IF561_22625 IPR034739 UvrD/AddA helicase, N-terminal IF561_22625 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22625 IPR013986 DExx box DNA helicase domain superfamily IF561_22625 IPR014017 UvrD-like DNA helicase, C-terminal IF561_22625 IPR000212 DNA helicase, UvrD/REP type IF561_22625 IPR014016 UvrD-like helicase, ATP-binding domain IF561_22630 IPR011701 Major facilitator superfamily IF561_22630 IPR020846 Major facilitator superfamily domain IF561_22630 IPR036259 MFS transporter superfamily IF561_22630 IPR023697 Multidrug resistance protein MdtL IF561_22630 IPR005829 Sugar transporter, conserved site IF561_22635 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22635 IPR023746 Transcription regulator HTH, YidZ IF561_22635 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain IF561_22635 IPR005119 LysR, substrate-binding IF561_22635 IPR000847 Transcription regulator HTH, LysR IF561_22635 IPR036390 Winged helix DNA-binding domain superfamily IF561_22650 IPR006120 Resolvase, HTH domain IF561_22650 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IF561_22650 IPR006119 Resolvase, N-terminal catalytic domain IF561_22650 IPR006118 Recombinase, conserved site IF561_22650 IPR009057 Homeobox-like domain superfamily IF561_22665 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IF561_22665 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site IF561_22670 IPR002545 CheW-like domain IF561_22670 IPR011006 CheY-like superfamily IF561_22670 IPR001789 Signal transduction response regulator, receiver domain IF561_22670 IPR024181 Chemotaxis response regulator CheV IF561_22670 IPR036061 CheW-like domain superfamily IF561_22680 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative IF561_22680 IPR012349 FMN-binding split barrel IF561_22680 IPR014419 Heme utilization protein HutZ IF561_22685 IPR010413 Intracellular heme transport protein HutX-like IF561_22690 IPR026332 Anaerobilin synthase HutW IF561_22690 IPR034505 Anaerobic coproporphyrinogen-III oxidase IF561_22690 IPR007197 Radical SAM IF561_22690 IPR023404 Radical SAM, alpha/beta horseshoe IF561_22690 IPR006638 Elp3/MiaB/NifB IF561_22695 IPR006260 TonB/TolA, C-terminal IF561_22695 IPR003538 Gram-negative bacterial TonB protein IF561_22695 IPR037682 TonB, C-terminal IF561_22700 IPR002898 MotA/TolQ/ExbB proton channel IF561_22705 IPR003400 Biopolymer transport protein ExbD/TolR IF561_22715 IPR000522 ABC transporter, permease protein, BtuC-like IF561_22715 IPR037294 ABC transporter, BtuC-like IF561_22720 IPR015863 ABC transporter, hemin import, HmuV IF561_22720 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22720 IPR003439 ABC transporter-like IF561_22720 IPR003593 AAA+ ATPase domain IF561_22760 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase IF561_22760 IPR004821 Cytidyltransferase-like domain IF561_22760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_22765 IPR022310 NAD/GMP synthase IF561_22765 IPR003694 NAD(+) synthetase IF561_22765 IPR022926 NH(3)-dependent NAD(+) synthetase IF561_22765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_22770 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_22770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_22770 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IF561_22770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IF561_22770 IPR012675 Beta-grasp domain superfamily IF561_22770 IPR005302 Molybdenum cofactor sulfurase, C-terminal IF561_22770 IPR005303 MOSC, N-terminal beta barrel IF561_22770 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_22770 IPR005303 MOSC, N-terminal beta barrel IF561_22770 IPR005302 Molybdenum cofactor sulfurase, C-terminal IF561_22770 IPR012675 Beta-grasp domain superfamily IF561_22770 IPR036010 2Fe-2S ferredoxin-like superfamily IF561_22770 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IF561_22770 IPR011037 Pyruvate kinase-like, insert domain superfamily IF561_22775 IPR000612 Proteolipid membrane potential modulator IF561_22780 IPR002195 Dihydroorotase, conserved site IF561_22780 IPR006680 Amidohydrolase-related IF561_22780 IPR004721 Dihydroorotase homodimeric type IF561_22780 IPR032466 Metal-dependent hydrolase IF561_22785 IPR008526 Inner membrane protein YedI IF561_22815 IPR018060 DNA binding HTH domain, AraC-type IF561_22815 IPR002491 ABC transporter periplasmic binding domain IF561_22815 IPR009057 Homeobox-like domain superfamily IF561_22815 IPR020449 Transcription regulator HTH, AraC- type IF561_22815 IPR018062 HTH domain AraC-type, conserved site IF561_22820 IPR015424 Pyridoxal phosphate-dependent transferase IF561_22820 IPR004839 Aminotransferase, class I/classII IF561_22820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_22820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_22845 IPR026463 Chitooligosaccharide synthase NodC IF561_22845 IPR029044 Nucleotide-diphospho-sugar transferases IF561_22845 IPR001173 Glycosyltransferase 2-like IF561_22860 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IF561_22860 IPR014014 RNA helicase, DEAD-box type, Q motif IF561_22860 IPR001650 Helicase, C-terminal IF561_22860 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22860 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_22860 IPR028622 ATP-dependent RNA helicase RhlE IF561_22860 IPR011545 DEAD/DEAH box helicase domain IF561_22870 IPR036390 Winged helix DNA-binding domain superfamily IF561_22870 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22870 IPR000847 Transcription regulator HTH, LysR IF561_22870 IPR005119 LysR, substrate-binding IF561_22875 IPR005119 LysR, substrate-binding IF561_22875 IPR000847 Transcription regulator HTH, LysR IF561_22875 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22875 IPR036390 Winged helix DNA-binding domain superfamily IF561_22885 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IF561_22885 IPR013785 Aldolase-type TIM barrel IF561_22890 IPR020843 Polyketide synthase, enoylreductase domain IF561_22890 IPR036291 NAD(P)-binding domain superfamily IF561_22890 IPR011032 GroES-like superfamily IF561_22890 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IF561_22890 IPR013154 Alcohol dehydrogenase, N-terminal IF561_22890 IPR004627 L-threonine 3-dehydrogenase IF561_22890 IPR013149 Alcohol dehydrogenase, C-terminal IF561_22900 IPR014007 Acetoin reductase IF561_22900 IPR036291 NAD(P)-binding domain superfamily IF561_22900 IPR020904 Short-chain dehydrogenase/reductase, conserved site IF561_22900 IPR002347 Short-chain dehydrogenase/reductase SDR IF561_22905 IPR020449 Transcription regulator HTH, AraC- type IF561_22905 IPR018060 DNA binding HTH domain, AraC-type IF561_22905 IPR009057 Homeobox-like domain superfamily IF561_22905 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IF561_22910 IPR018636 Protein of unknown function DUF2058 IF561_22925 IPR036390 Winged helix DNA-binding domain superfamily IF561_22925 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22925 IPR005119 LysR, substrate-binding IF561_22925 IPR000847 Transcription regulator HTH, LysR IF561_22930 IPR042111 Adenylosuccinate synthetase, domain 3 IF561_22930 IPR001114 Adenylosuccinate synthetase IF561_22930 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_22930 IPR042109 Adenylosuccinate synthetase, domain 1 IF561_22930 IPR042110 Adenylosuccinate synthetase, domain 2 IF561_22935 IPR006034 Asparaginase/glutaminase-like IF561_22935 IPR036152 Asparaginase/glutaminase-like superfamily IF561_22935 IPR004550 L-asparaginase, type II IF561_22935 IPR027475 Asparaginase/glutaminase, active site 2 IF561_22935 IPR040919 Asparaginase/glutaminase, C-terminal IF561_22935 IPR027473 L-asparaginase, C-terminal IF561_22935 IPR027474 L-asparaginase, N-terminal IF561_22935 IPR037152 L-asparaginase, N-terminal domain superfamily IF561_22935 IPR020827 Asparaginase/glutaminase, active site 1 IF561_22940 IPR026530 Phosphoenolpyruvate synthase regulatory protein IF561_22940 IPR005177 Bifunctional kinase-pyrophosphorylase IF561_22945 IPR006319 Phosphoenolpyruvate synthase IF561_22945 IPR013815 ATP-grasp fold, subdomain 1 IF561_22945 IPR018274 PEP-utilising enzyme, active site IF561_22945 IPR000121 PEP-utilising enzyme, C-terminal IF561_22945 IPR023151 PEP-utilising enzyme, conserved site IF561_22945 IPR036637 Phosphohistidine domain superfamily IF561_22945 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding IF561_22945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IF561_22945 IPR040442 Pyruvate kinase-like domain superfamily IF561_22945 IPR008279 PEP-utilising enzyme, mobile domain IF561_22960 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_22960 IPR002305 Aminoacyl-tRNA synthetase, class Ic IF561_22960 IPR002942 RNA-binding S4 domain IF561_22960 IPR036986 RNA-binding S4 domain superfamily IF561_22960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_22960 IPR024088 Tyrosine-tRNA ligase, bacterial-type IF561_22960 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 IF561_22960 IPR002307 Tyrosine-tRNA ligase IF561_22965 IPR006059 Bacterial extracellular solute-binding protein IF561_22965 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein IF561_22975 IPR036390 Winged helix DNA-binding domain superfamily IF561_22975 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_22975 IPR000847 Transcription regulator HTH, LysR IF561_22975 IPR005119 LysR, substrate-binding IF561_22980 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_22985 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_22985 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA IF561_22985 IPR001036 Acriflavin resistance protein IF561_23000 IPR029787 Nucleotide cyclase IF561_23000 IPR000160 GGDEF domain IF561_23000 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region IF561_23010 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23010 IPR000792 Transcription regulator LuxR, C-terminal IF561_23010 IPR016032 Signal transduction response regulator, C-terminal effector IF561_23015 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily IF561_23015 IPR017853 Glycoside hydrolase superfamily IF561_23015 IPR006104 Glycosyl hydrolases family 2, sugar binding domain IF561_23015 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich IF561_23015 IPR008979 Galactose-binding-like domain superfamily IF561_23015 IPR040605 Glycoside hydrolase family 2, domain 5 IF561_23015 IPR006101 Glycoside hydrolase, family 2 IF561_23015 IPR006103 Glycoside hydrolase family 2, catalytic domain IF561_23015 IPR023232 Glycoside hydrolase, family 2, active site IF561_23015 IPR023230 Glycoside hydrolase, family 2, conserved site IF561_23015 IPR013783 Immunoglobulin-like fold IF561_23020 IPR000060 BCCT transporter family IF561_23025 IPR017722 Phosphonate utilization transcriptional regulator PhnR IF561_23025 IPR000524 Transcription regulator HTH, GntR IF561_23025 IPR011663 UbiC transcription regulator-associated IF561_23025 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23025 IPR036390 Winged helix DNA-binding domain superfamily IF561_23025 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IF561_23050 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23050 IPR013611 Transport-associated OB, type 2 IF561_23050 IPR008995 Molybdate/tungstate binding, C-terminal IF561_23050 IPR017871 ABC transporter, conserved site IF561_23050 IPR015853 ABC transporter, ferric cation import, FbpC IF561_23050 IPR003593 AAA+ ATPase domain IF561_23050 IPR003439 ABC transporter-like IF561_23075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IF561_23075 IPR001036 Acriflavin resistance protein IF561_23080 IPR006143 RND efflux pump, membrane fusion protein IF561_23080 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA IF561_23080 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_23085 IPR025202 Phospholipase D-like domain IF561_23085 IPR001736 Phospholipase D/Transphosphatidylase IF561_23085 IPR030871 Cardiolipin synthase C IF561_23110 IPR015358 Transcription regulator MerR, DNA binding IF561_23110 IPR009061 Putative DNA-binding domain superfamily IF561_23110 IPR000551 MerR-type HTH domain IF561_23110 IPR010211 Redox-sensitive transcriptional activator SoxR IF561_23120 IPR000847 Transcription regulator HTH, LysR IF561_23120 IPR005119 LysR, substrate-binding IF561_23120 IPR037414 Transcriptional activator protein LysR, PBP2 domain IF561_23120 IPR036390 Winged helix DNA-binding domain superfamily IF561_23120 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23130 IPR029065 Enolase C-terminal domain-like IF561_23130 IPR029017 Enolase-like, N-terminal IF561_23130 IPR036849 Enolase-like, C-terminal domain superfamily IF561_23130 IPR034603 Dipeptide epimerase IF561_23130 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IF561_23130 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain IF561_23130 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site IF561_23135 IPR009022 Elongation factor G, domain III IF561_23135 IPR035647 EF-G domain III/V-like IF561_23135 IPR035649 EFG, domain V IF561_23135 IPR005517 Translation elongation factor EFG/EF2, domain IV IF561_23135 IPR004540 Translation elongation factor EFG/EF2 IF561_23135 IPR009000 Translation protein, beta-barrel domain superfamily IF561_23135 IPR000795 Transcription factor, GTP-binding domain IF561_23135 IPR005225 Small GTP-binding protein domain IF561_23135 IPR000640 Elongation factor EFG, domain V-like IF561_23135 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_23135 IPR041095 Elongation Factor G, domain II IF561_23135 IPR031157 Tr-type G domain, conserved site IF561_23135 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23135 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_23135 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_23160 IPR013324 RNA polymerase sigma factor, region 3/4-like IF561_23160 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23160 IPR002852 Uncharacterised protein family UPF0251 IF561_23165 IPR038139 NlpE, C-terminal domain superfamily IF561_23165 IPR033450 NlpE, C-terminal OB domain IF561_23165 IPR007298 Copper resistance lipoprotein NlpE IF561_23170 IPR010583 MltA-interacting MipA IF561_23180 IPR002368 Outer membrane protein, OmpA IF561_23180 IPR036737 OmpA-like domain superfamily IF561_23180 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_23180 IPR006665 OmpA-like domain IF561_23180 IPR006664 Outer membrane protein, bacterial IF561_23180 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_23180 IPR000498 Outer membrane protein OmpA-like, transmembrane domain IF561_23185 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23185 IPR036390 Winged helix DNA-binding domain superfamily IF561_23185 IPR005119 LysR, substrate-binding IF561_23185 IPR000847 Transcription regulator HTH, LysR IF561_23205 IPR007229 Nicotinate phosphoribosyltransferase family IF561_23205 IPR006406 Nicotinate phosphoribosyltransferase IF561_23205 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain IF561_23205 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase IF561_23205 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IF561_23215 IPR036380 Isochorismatase-like superfamily IF561_23215 IPR000868 Isochorismatase-like IF561_23225 IPR037060 Catalase core domain superfamily IF561_23225 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 IF561_23225 IPR002226 Catalase haem-binding site IF561_23225 IPR020835 Catalase superfamily IF561_23225 IPR024708 Catalase active site IF561_23225 IPR018028 Catalase, mono-functional, haem-containing IF561_23225 IPR010582 Catalase immune-responsive domain IF561_23225 IPR011614 Catalase core domain IF561_23235 IPR014036 DeoR C-terminal sensor domain IF561_23235 IPR001034 DeoR-type HTH domain IF561_23235 IPR037171 NagB/RpiA transferase-like IF561_23235 IPR018356 Transcription regulator, HTH DeoR-type, conserved site IF561_23235 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23235 IPR036390 Winged helix DNA-binding domain superfamily IF561_23240 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IF561_23240 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IF561_23240 IPR037523 Vicinal oxygen chelate (VOC) domain IF561_23245 IPR011057 Mss4-like superfamily IF561_23245 IPR002569 Peptide methionine sulphoxide reductase MsrA IF561_23245 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IF561_23245 IPR028427 Peptide methionine sulfoxide reductase IF561_23245 IPR002579 Peptide methionine sulphoxide reductase MrsB IF561_23255 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23255 IPR005119 LysR, substrate-binding IF561_23255 IPR000847 Transcription regulator HTH, LysR IF561_23255 IPR036390 Winged helix DNA-binding domain superfamily IF561_23265 IPR006327 Phosphotransferase system, fructose IIC component IF561_23265 IPR013014 Phosphotransferase system, EIIC component, type 2 IF561_23270 IPR004136 Nitronate monooxygenase IF561_23270 IPR013785 Aldolase-type TIM barrel IF561_23275 IPR008334 5'-Nucleotidase, C-terminal IF561_23275 IPR036907 5'-Nucleotidase, C-terminal domain superfamily IF561_23275 IPR006146 5'-Nucleotidase, conserved site IF561_23275 IPR006179 5'-Nucleotidase/apyrase IF561_23275 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_23275 IPR041827 CpdB, N-terminal metallophosphatase domain IF561_23275 IPR019931 LPXTG cell wall anchor domain IF561_23275 IPR029052 Metallo-dependent phosphatase-like IF561_23285 IPR013570 Transcription regulator YsiA, C-terminal IF561_23285 IPR001647 DNA-binding HTH domain, TetR-type IF561_23285 IPR009057 Homeobox-like domain superfamily IF561_23285 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IF561_23300 IPR000847 Transcription regulator HTH, LysR IF561_23300 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23300 IPR005119 LysR, substrate-binding IF561_23300 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 IF561_23300 IPR036390 Winged helix DNA-binding domain superfamily IF561_23305 IPR004778 Homoserine/Threonine efflux protein IF561_23305 IPR001123 Amino acid exporter protein, LeuE-type IF561_23320 IPR018370 Chaperonin Cpn60, conserved site IF561_23320 IPR001844 Chaperonin Cpn60 IF561_23320 IPR002423 Chaperonin Cpn60/TCP-1 family IF561_23320 IPR027409 GroEL-like apical domain superfamily IF561_23320 IPR027413 GroEL-like equatorial domain superfamily IF561_23320 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IF561_23325 IPR011032 GroES-like superfamily IF561_23325 IPR020818 GroES chaperonin family IF561_23325 IPR037124 GroES chaperonin superfamily IF561_23325 IPR018369 Chaperonin GroES, conserved site IF561_23330 IPR001763 Rhodanese-like domain IF561_23330 IPR036873 Rhodanese-like domain superfamily IF561_23330 IPR023695 Thiosulfate sulfurtransferase, bacterial IF561_23355 IPR013785 Aldolase-type TIM barrel IF561_23355 IPR000262 FMN-dependent dehydrogenase IF561_23355 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent IF561_23375 IPR013384 Flagellar hook-associated protein 3 IF561_23375 IPR001029 Flagellin, D0/D1 domain IF561_23380 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23380 IPR019776 Flagellar basal body rod protein, conserved site IF561_23380 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_23380 IPR002371 Flagellar hook-associated protein 1 IF561_23385 IPR019301 Flagellar protein FlgJ, N-terminal IF561_23385 IPR013377 Peptidoglycan hydrolase FlgJ IF561_23385 IPR023346 Lysozyme-like domain superfamily IF561_23385 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain IF561_23390 IPR001782 Flagellar P-ring protein IF561_23395 IPR000527 Flagellar L-ring protein IF561_23400 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_23400 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_23400 IPR019776 Flagellar basal body rod protein, conserved site IF561_23400 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23400 IPR012834 Flagellar basal-body rod FlgG IF561_23400 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_23405 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_23405 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23405 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_23405 IPR019776 Flagellar basal body rod protein, conserved site IF561_23405 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_23410 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IF561_23410 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IF561_23410 IPR019776 Flagellar basal body rod protein, conserved site IF561_23410 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23410 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_23410 IPR037058 Flagellar hook protein FlgE superfamily IF561_23410 IPR011491 Flagellar hook protein FlgE IF561_23415 IPR025965 FlgD Ig-like domain IF561_23415 IPR025963 FlgD Tudor-like domain IF561_23415 IPR005648 Flagellar hook capping protein IF561_23420 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IF561_23420 IPR006299 Flagellar basal-body rod protein FlgC IF561_23420 IPR019776 Flagellar basal body rod protein, conserved site IF561_23420 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23425 IPR019776 Flagellar basal body rod protein, conserved site IF561_23425 IPR001444 Flagellar basal body rod protein, N-terminal IF561_23425 IPR006300 Flagellar basal-body rod protein FlgB IF561_23445 IPR023346 Lysozyme-like domain superfamily IF561_23445 IPR000189 Prokaryotic transglycosylase, active site IF561_23445 IPR008258 Transglycosylase SLT domain 1 IF561_23450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_23450 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IF561_23450 IPR002301 Isoleucine-tRNA ligase IF561_23450 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IF561_23450 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IF561_23450 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain IF561_23450 IPR023586 Isoleucine-tRNA ligase, type 2 IF561_23450 IPR002300 Aminoacyl-tRNA synthetase, class Ia IF561_23450 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IF561_23470 IPR029009 Allosteric substrate binding domain superfamily IF561_23470 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form IF561_23470 IPR005130 Serine dehydratase-like, alpha subunit IF561_23470 IPR005131 Serine dehydratase beta chain IF561_23475 IPR000109 Proton-dependent oligopeptide transporter family IF561_23475 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site IF561_23475 IPR020846 Major facilitator superfamily domain IF561_23475 IPR005279 Dipeptide/tripeptide permease IF561_23475 IPR036259 MFS transporter superfamily IF561_23485 IPR005119 LysR, substrate-binding IF561_23485 IPR000847 Transcription regulator HTH, LysR IF561_23485 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23485 IPR036390 Winged helix DNA-binding domain superfamily IF561_23495 IPR036390 Winged helix DNA-binding domain superfamily IF561_23495 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23495 IPR005119 LysR, substrate-binding IF561_23495 IPR000847 Transcription regulator HTH, LysR IF561_23500 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IF561_23500 IPR006664 Outer membrane protein, bacterial IF561_23500 IPR002368 Outer membrane protein, OmpA IF561_23500 IPR006665 OmpA-like domain IF561_23500 IPR000498 Outer membrane protein OmpA-like, transmembrane domain IF561_23500 IPR036737 OmpA-like domain superfamily IF561_23500 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_23505 IPR040626 Cytosolic carboxypeptidase, N-terminal IF561_23505 IPR000834 Peptidase M14, carboxypeptidase A IF561_23510 IPR006076 FAD dependent oxidoreductase IF561_23510 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_23515 IPR007488 Protein of unknown function DUF535 IF561_23530 IPR036390 Winged helix DNA-binding domain superfamily IF561_23530 IPR011663 UbiC transcription regulator-associated IF561_23530 IPR017722 Phosphonate utilization transcriptional regulator PhnR IF561_23530 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IF561_23530 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23530 IPR000524 Transcription regulator HTH, GntR IF561_23535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IF561_23535 IPR035906 MetI-like superfamily IF561_23540 IPR003593 AAA+ ATPase domain IF561_23540 IPR003439 ABC transporter-like IF561_23540 IPR017871 ABC transporter, conserved site IF561_23540 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23540 IPR008995 Molybdate/tungstate binding, C-terminal IF561_23540 IPR015853 ABC transporter, ferric cation import, FbpC IF561_23540 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 IF561_23550 IPR026045 Ferric binding protein IF561_23555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_23555 IPR012703 2-aminoethylphosphonate--pyruvate transaminase IF561_23555 IPR000192 Aminotransferase class V domain IF561_23555 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase IF561_23555 IPR015424 Pyridoxal phosphate-dependent transferase IF561_23555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_23560 IPR005814 Aminotransferase class-III IF561_23560 IPR015424 Pyridoxal phosphate-dependent transferase IF561_23560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_23560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_23565 IPR041492 Haloacid dehalogenase-like hydrolase IF561_23565 IPR006439 HAD hydrolase, subfamily IA IF561_23565 IPR036412 HAD-like superfamily IF561_23565 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_23565 IPR006323 Phosphonoacetaldehyde hydrolase IF561_23565 IPR023214 HAD superfamily IF561_23570 IPR000843 LacI-type HTH domain IF561_23570 IPR028082 Periplasmic binding protein-like I IF561_23570 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_23575 IPR016152 Phosphotransferase/anion transporter IF561_23575 IPR002178 PTS EIIA type-2 domain IF561_23585 IPR004703 Phosphotransferase system, sugar-specific permease component IF561_23595 IPR034202 Subtilisin Carlsberg-like catalytic domain IF561_23595 IPR023828 Peptidase S8, subtilisin, Ser-active site IF561_23595 IPR036852 Peptidase S8/S53 domain superfamily IF561_23595 IPR023827 Peptidase S8, subtilisin, Asp-active site IF561_23595 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IF561_23595 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 IF561_23595 IPR015500 Peptidase S8, subtilisin-related IF561_23595 IPR000209 Peptidase S8/S53 domain IF561_23595 IPR022398 Peptidase S8, subtilisin, His-active site IF561_23600 IPR008265 Lipase, GDSL, active site IF561_23600 IPR001087 GDSL lipase/esterase IF561_23600 IPR036514 SGNH hydrolase superfamily IF561_23605 IPR010131 RND efflux system, outer membrane lipoprotein, NodT IF561_23605 IPR003423 Outer membrane efflux protein IF561_23610 IPR025857 MacB-like periplasmic core domain IF561_23610 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23610 IPR017911 ABC transporter, macrolide export, ATP-binding domain IF561_23610 IPR017871 ABC transporter, conserved site IF561_23610 IPR003439 ABC transporter-like IF561_23610 IPR003838 ABC transporter permease protein domain IF561_23610 IPR003593 AAA+ ATPase domain IF561_23615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IF561_23615 IPR030190 Macrolide export protein MacA IF561_23615 IPR006143 RND efflux pump, membrane fusion protein IF561_23620 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IF561_23620 IPR042117 OMPP1/FadL/TodX superfamily IF561_23625 IPR041891 Carbonic anhydrase, prokaryotic-like IF561_23625 IPR001148 Alpha carbonic anhydrase domain IF561_23625 IPR036398 Alpha carbonic anhydrase domain superfamily IF561_23625 IPR023561 Carbonic anhydrase, alpha-class IF561_23625 IPR018338 Carbonic anhydrase, alpha-class, conserved site IF561_23630 IPR006513 Conserved hypothetical protein CHP01626, YtfJ IF561_23645 IPR041492 Haloacid dehalogenase-like hydrolase IF561_23645 IPR023214 HAD superfamily IF561_23645 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IF561_23645 IPR036412 HAD-like superfamily IF561_23645 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB IF561_23645 IPR006439 HAD hydrolase, subfamily IA IF561_23650 IPR036390 Winged helix DNA-binding domain superfamily IF561_23650 IPR000847 Transcription regulator HTH, LysR IF561_23650 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23650 IPR005119 LysR, substrate-binding IF561_23685 IPR011004 Trimeric LpxA-like superfamily IF561_23685 IPR018357 Hexapeptide transferase, conserved site IF561_23685 IPR024688 Maltose/galactoside acetyltransferase IF561_23685 IPR001451 Hexapeptide repeat IF561_23690 IPR015946 K homology domain-like, alpha/beta IF561_23690 IPR003718 OsmC/Ohr family IF561_23690 IPR036102 OsmC/Ohr superfamily IF561_23695 IPR002579 Peptide methionine sulphoxide reductase MrsB IF561_23695 IPR011057 Mss4-like superfamily IF561_23695 IPR002569 Peptide methionine sulphoxide reductase MsrA IF561_23695 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IF561_23695 IPR028427 Peptide methionine sulfoxide reductase IF561_23710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_23710 IPR007357 Deoxyribodipyrimidine photolyase-related protein IF561_23710 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily IF561_23715 IPR014133 Cryptochrome DASH IF561_23715 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily IF561_23715 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily IF561_23715 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain IF561_23715 IPR002081 Cryptochrome/DNA photolyase class 1 IF561_23715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_23715 IPR006050 DNA photolyase, N-terminal IF561_23720 IPR000160 GGDEF domain IF561_23720 IPR029787 Nucleotide cyclase IF561_23735 IPR003660 HAMP domain IF561_23735 IPR000727 Target SNARE coiled-coil homology domain IF561_23735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_23735 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_23735 IPR004090 Chemotaxis methyl-accepting receptor IF561_23740 IPR007894 MASE2 IF561_23740 IPR000160 GGDEF domain IF561_23740 IPR029787 Nucleotide cyclase IF561_23745 IPR004574 Alkylated DNA repair protein AlkB IF561_23745 IPR005123 Oxoglutarate/iron-dependent dioxygenase IF561_23745 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily IF561_23745 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like IF561_23755 IPR002668 Concentrative nucleoside transporter N-terminal domain IF561_23755 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IF561_23755 IPR008276 Concentrative nucleoside transporter IF561_23755 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial IF561_23755 IPR011657 Concentrative nucleoside transporter C-terminal domain IF561_23770 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase IF561_23770 IPR011166 Beta-eliminating lyase family IF561_23770 IPR015424 Pyridoxal phosphate-dependent transferase IF561_23770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_23770 IPR018176 Tryptophanase, conserved site IF561_23770 IPR013440 Tryptophanase IF561_23770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_23780 IPR030862 L-2-hydroxyglutarate dehydrogenase IF561_23780 IPR036188 FAD/NAD(P)-binding domain superfamily IF561_23780 IPR006076 FAD dependent oxidoreductase IF561_23795 IPR004685 Branched-chain amino acid transport system II carrier protein IF561_23800 IPR029787 Nucleotide cyclase IF561_23800 IPR000160 GGDEF domain IF561_23800 IPR013656 PAS fold-4 IF561_23800 IPR035965 PAS domain superfamily IF561_23800 IPR000700 PAS-associated, C-terminal IF561_23800 IPR000014 PAS domain IF561_23805 IPR025944 Sigma-54 interaction domain, conserved site IF561_23805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IF561_23805 IPR002078 RNA polymerase sigma factor 54 interaction domain IF561_23805 IPR001789 Signal transduction response regulator, receiver domain IF561_23805 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23805 IPR002197 DNA binding HTH domain, Fis-type IF561_23805 IPR009057 Homeobox-like domain superfamily IF561_23805 IPR011006 CheY-like superfamily IF561_23805 IPR003593 AAA+ ATPase domain IF561_23805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IF561_23810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_23810 IPR029151 Periplasmic sensor-like domain superfamily IF561_23810 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) IF561_23810 IPR005467 Histidine kinase domain IF561_23810 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_23810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_23810 IPR003594 Histidine kinase/HSP90-like ATPase IF561_23810 IPR033479 Double Cache domain 1 IF561_23810 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_23815 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site IF561_23815 IPR001360 Glycoside hydrolase family 1 IF561_23815 IPR017853 Glycoside hydrolase superfamily IF561_23815 IPR018120 Glycoside hydrolase family 1, active site IF561_23840 IPR005119 LysR, substrate-binding IF561_23840 IPR000847 Transcription regulator HTH, LysR IF561_23840 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23840 IPR036390 Winged helix DNA-binding domain superfamily IF561_23845 IPR011761 ATP-grasp fold IF561_23845 IPR013651 ATP-grasp fold, RimK-type IF561_23845 IPR013815 ATP-grasp fold, subdomain 1 IF561_23845 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK IF561_23845 IPR041107 RimK, PreATP-grasp domain IF561_23845 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX IF561_23850 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK IF561_23850 IPR021109 Aspartic peptidase domain superfamily IF561_23850 IPR011761 ATP-grasp fold IF561_23850 IPR013651 ATP-grasp fold, RimK-type IF561_23850 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX IF561_23850 IPR041107 RimK, PreATP-grasp domain IF561_23850 IPR013815 ATP-grasp fold, subdomain 1 IF561_23855 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IF561_23855 IPR001279 Metallo-beta-lactamase IF561_23855 IPR001018 Beta-lactamase, class-B, conserved site IF561_23860 IPR002985 Arginine decarboxylase IF561_23860 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IF561_23860 IPR041128 Arginine decarboxylase, C-terminal helical IF561_23860 IPR040634 Arginine decarboxylase, helical bundle domain IF561_23860 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IF561_23860 IPR000183 Ornithine/DAP/Arg decarboxylase IF561_23860 IPR029066 PLP-binding barrel IF561_23865 IPR020855 Ureohydrolase, manganese-binding site IF561_23865 IPR023696 Ureohydrolase domain superfamily IF561_23865 IPR006035 Ureohydrolase IF561_23865 IPR005925 Agmatinase-related IF561_23865 IPR023694 Agmatinase IF561_23870 IPR020846 Major facilitator superfamily domain IF561_23870 IPR011701 Major facilitator superfamily IF561_23870 IPR004734 Multidrug resistance protein IF561_23870 IPR036259 MFS transporter superfamily IF561_23875 IPR002470 Peptidase S9A, prolyl oligopeptidase IF561_23875 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IF561_23875 IPR029058 Alpha/Beta hydrolase fold IF561_23875 IPR023302 Peptidase S9A, N-terminal domain IF561_23875 IPR002471 Peptidase S9, serine active site IF561_23890 IPR037294 ABC transporter, BtuC-like IF561_23890 IPR001626 ABC transporter, TroCD-like IF561_23895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_23895 IPR003439 ABC transporter-like IF561_23895 IPR017871 ABC transporter, conserved site IF561_23895 IPR003593 AAA+ ATPase domain IF561_23900 IPR006129 Adhesin B IF561_23900 IPR006128 Adhesion lipoprotein IF561_23900 IPR006127 Periplasmic solute binding protein, ZnuA-like IF561_23940 IPR003400 Biopolymer transport protein ExbD/TolR IF561_23945 IPR002898 MotA/TolQ/ExbB proton channel IF561_23950 IPR002898 MotA/TolQ/ExbB proton channel IF561_23960 IPR012910 TonB-dependent receptor, plug domain IF561_23960 IPR037066 TonB-dependent receptor, plug domain superfamily IF561_23960 IPR039423 TonB-dependent receptor-like IF561_23960 IPR000531 TonB-dependent receptor-like, beta-barrel IF561_23960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IF561_23960 IPR010105 TonB-dependent siderophore receptor IF561_23965 IPR038428 2-component histidine kinase, sensor domain superfamily IF561_23965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IF561_23965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IF561_23965 IPR031930 2-component histidine kinase, sensor domain IF561_23965 IPR005467 Histidine kinase domain IF561_23965 IPR003660 HAMP domain IF561_23965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IF561_23965 IPR003594 Histidine kinase/HSP90-like ATPase IF561_23965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IF561_23970 IPR011006 CheY-like superfamily IF561_23970 IPR001867 OmpR/PhoB-type DNA-binding domain IF561_23970 IPR016032 Signal transduction response regulator, C-terminal effector IF561_23970 IPR001789 Signal transduction response regulator, receiver domain IF561_23970 IPR039420 Transcriptional regulatory protein WalR-like IF561_23970 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_23975 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IF561_23975 IPR001236 Lactate/malate dehydrogenase, N-terminal IF561_23975 IPR036291 NAD(P)-binding domain superfamily IF561_23975 IPR018177 L-lactate dehydrogenase, active site IF561_23975 IPR011304 L-lactate dehydrogenase IF561_23975 IPR001557 L-lactate/malate dehydrogenase IF561_23975 IPR022383 Lactate/malate dehydrogenase, C-terminal IF561_23980 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily IF561_23980 IPR030395 Glycerophosphodiester phosphodiesterase domain IF561_23990 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IF561_23990 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IF561_23990 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IF561_23990 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IF561_23990 IPR036291 NAD(P)-binding domain superfamily IF561_23995 IPR021230 Protein of unknown function DUF2810 IF561_24000 IPR020584 DNA recombination/repair protein RecA, conserved site IF561_24000 IPR003593 AAA+ ATPase domain IF561_24000 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IF561_24000 IPR023400 DNA recombination and repair protein RecA, C-terminal IF561_24000 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface IF561_24000 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24000 IPR013765 DNA recombination and repair protein RecA IF561_24065 IPR006321 Pilus retraction protein PilT IF561_24065 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24065 IPR001482 Type II/IV secretion system protein IF561_24075 IPR004846 Type II/III secretion system IF561_24075 IPR011514 Secretin, N-terminal IF561_24090 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24090 IPR001482 Type II/IV secretion system protein IF561_24105 IPR042181 Type II secretion system, protein E, N-terminal IF561_24105 IPR007831 General secretory system II, protein E, N-terminal IF561_24105 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_24105 IPR001482 Type II/IV secretion system protein IF561_24105 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24105 IPR013374 ATPase, type IV, pilus assembly, PilB IF561_24105 IPR003593 AAA+ ATPase domain IF561_24115 IPR023885 4Fe4S-binding SPASM domain IF561_24115 IPR013785 Aldolase-type TIM barrel IF561_24115 IPR007197 Radical SAM IF561_24115 IPR034485 Anaerobic Cys-type sulfatase-maturating enzyme IF561_24165 IPR034748 Exonuclease I, C-terminal alpha-helical domain IF561_24165 IPR034747 Exonuclease I, SH3-like domain IF561_24165 IPR038649 Exonuclease I, SH3-like domain superfamily IF561_24165 IPR013620 Exodeoxyribonuclease I, C-terminal IF561_24165 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_24165 IPR012337 Ribonuclease H-like superfamily IF561_24165 IPR036397 Ribonuclease H superfamily IF561_24165 IPR023607 Exodeoxyribonuclease I IF561_24210 IPR028612 DNA topoisomerase I, type IA IF561_24210 IPR013497 DNA topoisomerase, type IA, central IF561_24210 IPR013498 DNA topoisomerase, type IA, zn finger IF561_24210 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IF561_24210 IPR023405 DNA topoisomerase, type IA, core domain IF561_24210 IPR003601 DNA topoisomerase, type IA, domain 2 IF561_24210 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IF561_24210 IPR023406 DNA topoisomerase, type IA, active site IF561_24210 IPR000380 DNA topoisomerase, type IA IF561_24210 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IF561_24210 IPR006171 TOPRIM domain IF561_24210 IPR005733 DNA topoisomerase I, bacterial-type IF561_24210 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IF561_24210 IPR034149 DNA topoisomerase 1, TOPRIM domain IF561_24225 IPR038366 Zinc finger, ClpX C4-type superfamily IF561_24225 IPR010603 Zinc finger, ClpX C4-type IF561_24225 IPR003593 AAA+ ATPase domain IF561_24225 IPR004487 Clp protease, ATP-binding subunit ClpX IF561_24225 IPR019489 Clp ATPase, C-terminal IF561_24225 IPR003959 ATPase, AAA-type, core IF561_24225 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24230 IPR012337 Ribonuclease H-like superfamily IF561_24230 IPR036397 Ribonuclease H superfamily IF561_24230 IPR008918 Helix-hairpin-helix motif, class 2 IF561_24230 IPR002298 DNA polymerase A IF561_24230 IPR018320 DNA polymerase 1 IF561_24230 IPR001098 DNA-directed DNA polymerase, family A, palm domain IF561_24230 IPR019760 DNA-directed DNA polymerase, family A, conserved site IF561_24230 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IF561_24230 IPR002421 5'-3' exonuclease, N-terminal IF561_24230 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IF561_24230 IPR002562 3'-5' exonuclease domain IF561_24230 IPR020045 DNA polymerase I-like, H3TH domain IF561_24230 IPR029060 PIN-like domain superfamily IF561_24270 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24270 IPR018078 DNA-binding, RecF, conserved site IF561_24270 IPR001238 DNA-binding, RecF IF561_24270 IPR042174 DNA-binding RecF, domain 2 IF561_24270 IPR003395 RecF/RecN/SMC, N-terminal IF561_24280 IPR014017 UvrD-like DNA helicase, C-terminal IF561_24280 IPR000212 DNA helicase, UvrD/REP type IF561_24280 IPR005751 ATP-dependent DNA helicase PcrA IF561_24280 IPR014016 UvrD-like helicase, ATP-binding domain IF561_24280 IPR034739 UvrD/AddA helicase, N-terminal IF561_24280 IPR013986 DExx box DNA helicase domain superfamily IF561_24280 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24290 IPR006171 TOPRIM domain IF561_24290 IPR034144 DNA topoisomerase 3-like, TOPRIM domain IF561_24290 IPR005738 DNA topoisomerase III IF561_24290 IPR023405 DNA topoisomerase, type IA, core domain IF561_24290 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IF561_24290 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IF561_24290 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IF561_24290 IPR023406 DNA topoisomerase, type IA, active site IF561_24290 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IF561_24290 IPR013497 DNA topoisomerase, type IA, central IF561_24290 IPR003601 DNA topoisomerase, type IA, domain 2 IF561_24290 IPR000380 DNA topoisomerase, type IA IF561_24295 IPR001633 EAL domain IF561_24295 IPR035919 EAL domain superfamily IF561_24295 IPR000160 GGDEF domain IF561_24295 IPR007895 MASE1 IF561_24315 IPR011545 DEAD/DEAH box helicase domain IF561_24315 IPR004609 ATP-dependent DNA helicase RecG IF561_24315 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_24315 IPR001650 Helicase, C-terminal IF561_24315 IPR012340 Nucleic acid-binding, OB-fold IF561_24315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24315 IPR033454 RecG, wedge domain IF561_24320 IPR023063 FeS cluster insertion protein ErpA IF561_24320 IPR000361 FeS cluster biogenesis IF561_24320 IPR017870 FeS cluster insertion, C-terminal, conserved site IF561_24320 IPR016092 FeS cluster insertion protein IF561_24320 IPR035903 HesB-like domain superfamily IF561_24335 IPR016195 Polymerase/histidinol phosphatase-like IF561_24335 IPR003141 Polymerase/histidinol phosphatase, N-terminal IF561_24335 IPR004013 PHP domain IF561_24335 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IF561_24335 IPR029460 DNA polymerase, helix-hairpin-helix motif IF561_24335 IPR040982 DNA polymerase III alpha subunit finger domain IF561_24335 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain IF561_24335 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IF561_24335 IPR004805 DNA polymerase III, alpha subunit IF561_24340 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24340 IPR007693 DNA helicase, DnaB-like, N-terminal IF561_24340 IPR007694 DNA helicase, DnaB-like, C-terminal IF561_24340 IPR003593 AAA+ ATPase domain IF561_24340 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IF561_24340 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IF561_24340 IPR007692 DNA helicase, DnaB type IF561_24345 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IF561_24345 IPR006309 DNA polymerase 3, epsilon subunit IF561_24345 IPR013520 Exonuclease, RNase T/DNA polymerase III IF561_24345 IPR012337 Ribonuclease H-like superfamily IF561_24345 IPR036397 Ribonuclease H superfamily IF561_24355 IPR001478 PDZ domain IF561_24355 IPR041489 PDZ domain 6 IF561_24355 IPR008915 Peptidase M50 IF561_24355 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IF561_24355 IPR036034 PDZ superfamily IF561_24375 IPR003156 DHHA1 domain IF561_24375 IPR004610 Bacterial RecJ exonuclease IF561_24375 IPR041122 RecJ, OB domain IF561_24375 IPR001667 DDH domain IF561_24375 IPR038763 DHH phosphoesterase superfamily IF561_24385 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24385 IPR006344 RecBCD enzyme subunit RecD IF561_24385 IPR027785 UvrD-like helicase C-terminal domain IF561_24395 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24395 IPR018982 RQC domain IF561_24395 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain IF561_24395 IPR002121 HRDC domain IF561_24395 IPR010997 HRDC-like superfamily IF561_24395 IPR001650 Helicase, C-terminal IF561_24395 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_24395 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial IF561_24395 IPR004589 DNA helicase, ATP-dependent, RecQ type IF561_24395 IPR011545 DEAD/DEAH box helicase domain IF561_24395 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_24400 IPR018094 Thymidylate kinase IF561_24400 IPR018095 Thymidylate kinase, conserved site IF561_24400 IPR039430 Thymidylate kinase-like domain IF561_24400 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24430 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24430 IPR001482 Type II/IV secretion system protein IF561_24430 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_24430 IPR013369 Type II secretion system GspE IF561_24430 IPR042181 Type II secretion system, protein E, N-terminal IF561_24430 IPR003593 AAA+ ATPase domain IF561_24500 IPR007476 Putative exonuclease, RdgC IF561_24535 IPR003395 RecF/RecN/SMC, N-terminal IF561_24535 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24535 IPR004604 DNA recombination/repair protein RecN IF561_24555 IPR003607 HD/PDEase domain IF561_24555 IPR006674 HD domain IF561_24565 IPR036670 SecA, preprotein cross-linking domain superfamily IF561_24565 IPR011116 SecA Wing/Scaffold IF561_24565 IPR036266 SecA, Wing/Scaffold superfamily IF561_24565 IPR014018 SecA motor DEAD IF561_24565 IPR011130 SecA, preprotein cross-linking domain IF561_24565 IPR004027 SEC-C motif IF561_24565 IPR000185 Protein translocase subunit SecA IF561_24565 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24565 IPR011115 SecA DEAD-like, N-terminal IF561_24565 IPR020937 SecA conserved site IF561_24575 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase IF561_24575 IPR029787 Nucleotide cyclase IF561_24590 IPR001907 ATP-dependent Clp protease proteolytic subunit IF561_24590 IPR029045 ClpP/crotonase-like domain superfamily IF561_24590 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IF561_24590 IPR033135 ClpP, histidine active site IF561_24590 IPR018215 ClpP, Ser active site IF561_24610 IPR010627 Peptidase A24A, N-terminal IF561_24610 IPR014032 Peptidase A24A, prepilin type IV, bacterial IF561_24610 IPR000045 Prepilin type IV endopeptidase, peptidase domain IF561_24630 IPR041471 UvrB, interaction domain IF561_24630 IPR005118 Transcription-repair-coupling factor, C-terminal domain IF561_24630 IPR037235 TRCF-like, C-terminal domain IF561_24630 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24630 IPR011545 DEAD/DEAH box helicase domain IF561_24630 IPR001650 Helicase, C-terminal IF561_24630 IPR014001 Helicase superfamily 1/2, ATP-binding domain IF561_24630 IPR003711 CarD-like/TRCF domain IF561_24630 IPR004576 Transcription-repair coupling factor IF561_24630 IPR036101 CarD-like/TRCF domain superfamily IF561_24710 IPR007457 Fe(II) trafficking protein YggX IF561_24710 IPR036766 Fe(II) trafficking protein YggX superfamily IF561_24740 IPR003593 AAA+ ATPase domain IF561_24740 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24740 IPR010285 DNA helicase Pif1-like IF561_24805 IPR010240 Cysteine desulfurase IscS IF561_24805 IPR000192 Aminotransferase class V domain IF561_24805 IPR016454 Cysteine desulfurase IF561_24805 IPR015424 Pyridoxal phosphate-dependent transferase IF561_24805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_24805 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IF561_24805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_24820 IPR034739 UvrD/AddA helicase, N-terminal IF561_24820 IPR014016 UvrD-like helicase, ATP-binding domain IF561_24820 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_24820 IPR005752 ATP-dependent DNA helicase Rep IF561_24820 IPR000212 DNA helicase, UvrD/REP type IF561_24820 IPR013986 DExx box DNA helicase domain superfamily IF561_24820 IPR014017 UvrD-like DNA helicase, C-terminal IF561_25135 IPR029787 Nucleotide cyclase IF561_25135 IPR000160 GGDEF domain IF561_25150 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing IF561_25150 IPR001633 EAL domain IF561_25150 IPR035919 EAL domain superfamily IF561_25150 IPR013976 Metal-dependent hydrolase HDOD IF561_25175 IPR003593 AAA+ ATPase domain IF561_25175 IPR004504 DNA repair protein RadA IF561_25175 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_25175 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IF561_25175 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_25175 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IF561_25175 IPR041166 LapB, rubredoxin metal binding domain IF561_25185 IPR003325 TerD domain IF561_25190 IPR003325 TerD domain IF561_25205 IPR028157 PELOTA RNA-binding domain IF561_25205 IPR011215 Phosphoribosyl transferase IF561_25220 IPR003325 TerD domain IF561_25240 IPR030475 Ribonucleotide reductase small subunit, acitve site IF561_25240 IPR033909 Ribonucleotide reductase small subunit IF561_25240 IPR012348 Ribonucleotide reductase-like IF561_25240 IPR009078 Ferritin-like superfamily IF561_25240 IPR000358 Ribonucleotide reductase small subunit family IF561_25245 IPR013509 Ribonucleotide reductase large subunit, N-terminal IF561_25245 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IF561_25245 IPR039718 Ribonucleoside-diphosphate reductase large subunit IF561_25245 IPR013346 Ribonucleotide reductase, class I , alpha subunit IF561_25245 IPR005144 ATP-cone domain IF561_25245 IPR000788 Ribonucleotide reductase large subunit, C-terminal IF561_25270 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase IF561_25270 IPR016174 Di-haem cytochrome, transmembrane IF561_25275 IPR007372 Lipid/polyisoprenoid-binding, YceI-like IF561_25275 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily IF561_25275 IPR023480 Uncharacterised protein family UPF0312/YceI IF561_25295 IPR012327 D12 class N6 adenine-specific DNA methyltransferase IF561_25295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_25295 IPR012263 Adenine modification methylase, M.EcoRV-type IF561_25295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IF561_25295 IPR023095 Adenine-specific methyltransferase, domain 2 IF561_25330 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal IF561_25330 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase IF561_25330 IPR020568 Ribosomal protein S5 domain 2-type fold IF561_25330 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal IF561_25335 IPR004821 Cytidyltransferase-like domain IF561_25335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_25335 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase IF561_25340 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IF561_25340 IPR007229 Nicotinate phosphoribosyltransferase family IF561_25340 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain IF561_25340 IPR006406 Nicotinate phosphoribosyltransferase IF561_25340 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase IF561_25360 IPR035919 EAL domain superfamily IF561_25360 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain IF561_25360 IPR001633 EAL domain IF561_25385 IPR001267 Thymidine kinase IF561_25385 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_25400 IPR035903 HesB-like domain superfamily IF561_25400 IPR011302 Iron-binding protein IscA, proteobacteria IF561_25400 IPR016092 FeS cluster insertion protein IF561_25400 IPR000361 FeS cluster biogenesis IF561_25400 IPR017870 FeS cluster insertion, C-terminal, conserved site IF561_25405 IPR011339 ISC system FeS cluster assembly, IscU scaffold IF561_25405 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal IF561_25415 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type IF561_25415 IPR004150 NAD-dependent DNA ligase, OB-fold IF561_25415 IPR012340 Nucleic acid-binding, OB-fold IF561_25415 IPR013840 NAD-dependent DNA ligase, N-terminal IF561_25415 IPR041663 DisA/LigA, helix-hairpin-helix motif IF561_25415 IPR001679 NAD-dependent DNA ligase IF561_25415 IPR033136 NAD-dependent DNA ligase, conserved site IF561_25415 IPR018239 NAD-dependent DNA ligase, active site IF561_25415 IPR036420 BRCT domain superfamily IF561_25415 IPR013839 NAD-dependent DNA ligase, adenylation IF561_25415 IPR001357 BRCT domain IF561_25415 IPR010994 RuvA domain 2-like IF561_25440 IPR036567 Ribosome hibernation promotion factor-like IF561_25440 IPR003489 Ribosome hibernation promoting factor/RaiA IF561_25450 IPR027444 Histone-like protein H-NS, C-terminal domain IF561_25450 IPR027454 Histone-like protein H-NS, N-terminal IF561_25450 IPR001801 Histone-like protein H-NS IF561_25450 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily IF561_25490 IPR000119 Histone-like DNA-binding protein IF561_25490 IPR020816 Histone-like DNA-binding protein, conserved site IF561_25490 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_25490 IPR005685 Integration host factor, beta subunit IF561_25520 IPR036737 OmpA-like domain superfamily IF561_25520 IPR006664 Outer membrane protein, bacterial IF561_25520 IPR006665 OmpA-like domain IF561_25520 IPR006690 Outer membrane protein, OmpA-like, conserved site IF561_25530 IPR020081 SsrA-binding protein, conserved site IF561_25530 IPR000037 SsrA-binding protein IF561_25530 IPR023620 Small protein B IF561_25730 IPR012259 Dihydrofolate reductase IF561_25730 IPR024072 Dihydrofolate reductase-like domain superfamily IF561_25730 IPR017925 Dihydrofolate reductase conserved site IF561_25730 IPR001796 Dihydrofolate reductase domain IF561_25745 IPR003753 Exonuclease VII, large subunit IF561_25745 IPR025824 OB-fold nucleic acid binding domain IF561_25745 IPR020579 Exonuclease VII, large subunit, C-terminal IF561_25750 IPR002035 von Willebrand factor, type A IF561_25750 IPR036465 von Willebrand factor A-like domain superfamily IF561_25750 IPR019303 vWA found in TerF C terminus IF561_25835 IPR002043 Uracil-DNA glycosylase family 1 IF561_25835 IPR018085 Uracil-DNA glycosylase, active site IF561_25835 IPR005122 Uracil-DNA glycosylase-like IF561_25835 IPR036895 Uracil-DNA glycosylase-like domain superfamily IF561_25845 IPR005684 Integration host factor, alpha subunit IF561_25845 IPR000119 Histone-like DNA-binding protein IF561_25845 IPR020816 Histone-like DNA-binding protein, conserved site IF561_25845 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_25850 IPR013785 Aldolase-type TIM barrel IF561_25850 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic IF561_25850 IPR034457 Organic radical-activating enzymes IF561_25850 IPR001989 Radical-activating enzyme, conserved site IF561_25850 IPR007197 Radical SAM IF561_25880 IPR026590 Sirtuin family, catalytic core domain IF561_25880 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_25880 IPR026591 Sirtuin, catalytic core small domain superfamily IF561_25880 IPR027546 Sirtuin, class III IF561_25880 IPR003000 Sirtuin family IF561_25950 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain IF561_25950 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily IF561_25950 IPR020940 Thymidylate synthase, active site IF561_25950 IPR000398 Thymidylate synthase IF561_25995 IPR036397 Ribonuclease H superfamily IF561_25995 IPR012337 Ribonuclease H-like superfamily IF561_25995 IPR029060 PIN-like domain superfamily IF561_25995 IPR008918 Helix-hairpin-helix motif, class 2 IF561_25995 IPR018320 DNA polymerase 1 IF561_25995 IPR002562 3'-5' exonuclease domain IF561_25995 IPR001098 DNA-directed DNA polymerase, family A, palm domain IF561_25995 IPR019760 DNA-directed DNA polymerase, family A, conserved site IF561_25995 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IF561_25995 IPR002421 5'-3' exonuclease, N-terminal IF561_25995 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IF561_25995 IPR020045 DNA polymerase I-like, H3TH domain IF561_25995 IPR002298 DNA polymerase A IF561_26075 IPR021027 Transposase, putative, helix-turn-helix domain IF561_26145 IPR034907 Nucleoside diphosphate kinase-like domain IF561_26145 IPR001564 Nucleoside diphosphate kinase IF561_26145 IPR036850 Nucleoside diphosphate kinase-like domain superfamily IF561_26205 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IF561_26205 IPR017961 DNA polymerase, Y-family, little finger domain IF561_26205 IPR024728 DNA polymerase type-Y, HhH motif IF561_26205 IPR001126 UmuC domain IF561_26205 IPR025188 Domain of unknown function DUF4113 IF561_26215 IPR017850 Alkaline-phosphatase-like, core domain superfamily IF561_26215 IPR012549 Phosphoethanolamine transferase, N-terminal IF561_26215 IPR040423 Phosphoethanolamine transferase IF561_26215 IPR000917 Sulfatase, N-terminal IF561_26220 IPR000829 DAGK family IF561_26220 IPR033718 Diacylglycerol kinase, prokaryotic IF561_26220 IPR036945 Diacylglycerol kinase (DAGK) superfamily IF561_26345 IPR011215 Phosphoribosyl transferase IF561_26345 IPR028157 PELOTA RNA-binding domain IF561_26355 IPR001085 Serine hydroxymethyltransferase IF561_26355 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IF561_26355 IPR039429 Serine hydroxymethyltransferase-like domain IF561_26355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IF561_26355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IF561_26355 IPR015424 Pyridoxal phosphate-dependent transferase IF561_26380 IPR006213 Bax inhibitor 1, conserved site IF561_26380 IPR006214 Bax inhibitor 1-related IF561_26390 IPR003783 Regulatory protein RecX IF561_26390 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_26420 IPR001453 MoaB/Mog domain IF561_26420 IPR036425 MoaB/Mog-like domain superfamily IF561_26420 IPR008135 Competence-induced protein CinA IF561_26420 IPR008136 CinA, C-terminal IF561_26420 IPR036653 CinA-like, C-terminal IF561_26475 IPR036397 Ribonuclease H superfamily IF561_26475 IPR012337 Ribonuclease H-like superfamily IF561_26475 IPR017290 Ribonuclease H, Bacteroides-type IF561_26475 IPR037056 Ribonuclease H1, N-terminal domain superfamily IF561_26475 IPR011320 Ribonuclease H1, N-terminal IF561_26475 IPR009027 Ribosomal protein L9/RNase H1, N-terminal IF561_26495 IPR018117 DNA methylase, C-5 cytosine-specific, active site IF561_26495 IPR001525 C-5 cytosine methyltransferase IF561_26495 IPR009061 Putative DNA-binding domain superfamily IF561_26495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IF561_26495 IPR000551 MerR-type HTH domain IF561_26495 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site IF561_26500 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal IF561_26500 IPR012094 tRNA(Ile)-lysidine synthase IF561_26500 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal IF561_26500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IF561_26500 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain IF561_26500 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal IF561_26575 IPR004670 Na+/H+ antiporter NhaA IF561_26575 IPR023171 Na/H antiporter domain superfamily IF561_26580 IPR029052 Metallo-dependent phosphatase-like IF561_26580 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IF561_26580 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IF561_26675 IPR011344 Single-stranded DNA-binding protein IF561_26675 IPR012340 Nucleic acid-binding, OB-fold IF561_26675 IPR000424 Primosome PriB/single-strand DNA-binding IF561_26680 IPR003752 Disulphide bond formation protein DsbB/BdbC IF561_26680 IPR023380 DsbB-like superfamily IF561_26680 IPR022920 Disulphide bond formation protein DsbB IF561_26790 IPR002549 Transmembrane protein TqsA-like IF561_26810 IPR002745 Phosphotransferase KptA/Tpt1 IF561_26810 IPR042081 RNA 2'-phosphotransferase, C-terminal domain IF561_26810 IPR022928 RNA 2'-phosphotransferase KptA, putative IF561_26810 IPR042080 RNA 2'-phosphotransferase, N-terminal domain IF561_26850 IPR021027 Transposase, putative, helix-turn-helix domain IF561_26865 IPR015946 K homology domain-like, alpha/beta IF561_26865 IPR031166 EngA-type guanine nucleotide-binding (G) domain IF561_26865 IPR016484 GTP-binding protein EngA IF561_26865 IPR006073 GTP binding domain IF561_26865 IPR032859 GTPase Der, C-terminal KH-domain-like IF561_26865 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_26865 IPR005225 Small GTP-binding protein domain IF561_26985 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IF561_26985 IPR006144 Secretion protein HlyD, conserved site IF561_26985 IPR010129 Type I secretion membrane fusion protein, HlyD family IF561_27055 IPR006674 HD domain IF561_27055 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain IF561_27055 IPR012006 tRNA nucleotidyltransferase, proteobacteria IF561_27055 IPR003607 HD/PDEase domain IF561_27055 IPR002646 Poly A polymerase, head domain IF561_27085 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_27085 IPR001150 Glycine radical domain IF561_27085 IPR011140 Autonomous glycyl radical cofactor GrcA IF561_27115 IPR025669 AAA domain IF561_27115 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_27120 IPR011767 Glutaredoxin active site IF561_27120 IPR002109 Glutaredoxin IF561_27120 IPR014025 Glutaredoxin subgroup IF561_27120 IPR011902 Glutaredoxin, GrxA IF561_27120 IPR036249 Thioredoxin-like superfamily IF561_27125 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IF561_27125 IPR020816 Histone-like DNA-binding protein, conserved site IF561_27125 IPR000119 Histone-like DNA-binding protein IF561_27170 IPR000644 CBS domain IF561_27170 IPR002550 CNNM, transmembrane domain IF561_27195 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase IF561_27195 IPR005502 ADP-ribosylation/Crystallin J1 IF561_27195 IPR036705 ADP-ribosylation/Crystallin J1 superfamily IF561_27230 IPR022369 Integral membrane protein TerC, riboswitch-linked IF561_27230 IPR005496 Integral membrane protein TerC IF561_27270 IPR003000 Sirtuin family IF561_27270 IPR026590 Sirtuin family, catalytic core domain IF561_27270 IPR026591 Sirtuin, catalytic core small domain superfamily IF561_27270 IPR029035 DHS-like NAD/FAD-binding domain superfamily IF561_27270 IPR028628 Sirtuin, class U IF561_27285 IPR003115 ParB/Sulfiredoxin IF561_27285 IPR004437 ParB/RepB/Spo0J partition protein IF561_27285 IPR036086 ParB/Sulfiredoxin superfamily IF561_27285 IPR040873 SopB, HTH domain IF561_27435 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_27435 IPR020590 Guanylate kinase, conserved site IF561_27435 IPR017665 Guanylate kinase IF561_27435 IPR008144 Guanylate kinase-like domain IF561_27435 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IF561_27685 IPR005144 ATP-cone domain IF561_27685 IPR019777 Formate C-acetyltransferase glycine radical, conserved site IF561_27685 IPR001150 Glycine radical domain IF561_27685 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic IF561_27925 IPR003593 AAA+ ATPase domain IF561_27925 IPR003439 ABC transporter-like IF561_27925 IPR017871 ABC transporter, conserved site IF561_27925 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG IF561_27925 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_28085 IPR008024 YiaAB two helix IF561_28085 IPR038972 Inner membrane protein YiaA-like IF561_28215 IPR004090 Chemotaxis methyl-accepting receptor IF561_28215 IPR033479 Double Cache domain 1 IF561_28215 IPR003660 HAMP domain IF561_28215 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_28215 IPR029151 Periplasmic sensor-like domain superfamily IF561_28215 IPR000727 Target SNARE coiled-coil homology domain IF561_28265 IPR000941 Enolase IF561_28265 IPR029017 Enolase-like, N-terminal IF561_28265 IPR020810 Enolase, C-terminal TIM barrel domain IF561_28265 IPR020809 Enolase, conserved site IF561_28265 IPR020811 Enolase, N-terminal IF561_28265 IPR036849 Enolase-like, C-terminal domain superfamily IF561_28440 IPR012340 Nucleic acid-binding, OB-fold IF561_28440 IPR000424 Primosome PriB/single-strand DNA-binding IF561_28440 IPR011344 Single-stranded DNA-binding protein IF561_28475 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IF561_28475 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IF561_28480 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IF561_28480 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IF561_28490 IPR020084 NUDIX hydrolase, conserved site IF561_28490 IPR000086 NUDIX hydrolase domain IF561_28490 IPR015797 NUDIX hydrolase-like domain superfamily IF561_28490 IPR020476 NUDIX hydrolase IF561_28490 IPR003561 Mutator MutT IF561_28535 IPR027444 Histone-like protein H-NS, C-terminal domain IF561_28535 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily IF561_28535 IPR001801 Histone-like protein H-NS IF561_28535 IPR027454 Histone-like protein H-NS, N-terminal IF561_28670 IPR020084 NUDIX hydrolase, conserved site IF561_28670 IPR015797 NUDIX hydrolase-like domain superfamily IF561_28670 IPR020476 NUDIX hydrolase IF561_28670 IPR000086 NUDIX hydrolase domain IF561_28790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IF561_28790 IPR013430 Toxin-antitoxin system, antidote protein, HigA IF561_28790 IPR001387 Cro/C1-type helix-turn-helix domain IF561_28830 IPR006555 ATP-dependent helicase, C-terminal IF561_28830 IPR010614 DEAD2 IF561_28830 IPR039000 ATP-dependent DNA helicase DinG IF561_28830 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IF561_28830 IPR001650 Helicase, C-terminal IF561_28830 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_28885 IPR009081 Phosphopantetheine binding ACP domain IF561_28885 IPR003231 Acyl carrier protein (ACP) IF561_28885 IPR036736 ACP-like superfamily IF561_28885 IPR006162 Phosphopantetheine attachment site IF561_28895 IPR006638 Elp3/MiaB/NifB IF561_28895 IPR013483 Molybdenum cofactor biosynthesis protein A IF561_28895 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site IF561_28895 IPR013785 Aldolase-type TIM barrel IF561_28895 IPR007197 Radical SAM IF561_28895 IPR010505 Molybdenum cofactor synthesis C-terminal IF561_28900 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IF561_28900 IPR033720 Elongation factor Tu, domain 2 IF561_28900 IPR031157 Tr-type G domain, conserved site IF561_28900 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_28900 IPR005225 Small GTP-binding protein domain IF561_28900 IPR000795 Transcription factor, GTP-binding domain IF561_28900 IPR009000 Translation protein, beta-barrel domain superfamily IF561_28900 IPR004161 Translation elongation factor EFTu-like, domain 2 IF561_28900 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IF561_28900 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IF561_28900 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IF561_28965 IPR000727 Target SNARE coiled-coil homology domain IF561_28965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IF561_28965 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IF561_28965 IPR004090 Chemotaxis methyl-accepting receptor IF561_28965 IPR003660 HAMP domain IF561_28970 IPR036388 Winged helix-like DNA-binding domain superfamily IF561_28970 IPR003783 Regulatory protein RecX IF561_29100 IPR017508 HipA, N-terminal subdomain 1 IF561_29100 IPR012893 HipA-like, C-terminal IF561_29115 IPR037257 General secretory system II, protein E, N-terminal superfamily IF561_29115 IPR001482 Type II/IV secretion system protein IF561_29115 IPR027417 P-loop containing nucleoside triphosphate hydrolase IF561_29115 IPR042181 Type II secretion system, protein E, N-terminal IF561_29115 IPR007831 General secretory system II, protein E, N-terminal IF561_29195 IPR002589 Macro domain IF561_29455 IPR011767 Glutaredoxin active site IF561_29455 IPR002109 Glutaredoxin IF561_29455 IPR011906 Glutaredoxin domain IF561_29455 IPR014025 Glutaredoxin subgroup IF561_29455 IPR037944 Peroxiredoxin-5-like IF561_29455 IPR013740 Redoxin IF561_29455 IPR036249 Thioredoxin-like superfamily