locus-tag class description K9N54_00010 PF00128 Alpha amylase, catalytic domain K9N54_00015 PF05746 DALR anticodon binding domain K9N54_00015 PF02092 Glycyl-tRNA synthetase beta subunit K9N54_00020 PF02091 Glycyl-tRNA synthetase alpha subunit K9N54_00025 PF01169 Uncharacterized protein family UPF0016 K9N54_00035 PF01206 Sulfurtransferase TusA K9N54_00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_00045 PF03466 LysR substrate binding domain K9N54_00050 PF00107 Zinc-binding dehydrogenase K9N54_00050 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_00055 PF02803 Thiolase, C-terminal domain K9N54_00055 PF00108 Thiolase, N-terminal domain K9N54_00060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K9N54_00060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K9N54_00060 PF00378 Enoyl-CoA hydratase/isomerase K9N54_00065 PF09186 Domain of unknown function (DUF1949) K9N54_00065 PF01205 Uncharacterized protein family UPF0029 K9N54_00070 PF02386 Cation transport protein K9N54_00075 PF12724 Flavodoxin domain K9N54_00110 PF03466 LysR substrate binding domain K9N54_00110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_00115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain K9N54_00115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K9N54_00120 PF04380 Membrane fusogenic activity K9N54_00125 PF00873 AcrB/AcrD/AcrF family K9N54_00130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_00135 PF16295 Tetracyclin repressor-like, C-terminal domain K9N54_00135 PF00440 Bacterial regulatory proteins, tetR family K9N54_00140 PF00580 UvrD/REP helicase N-terminal domain K9N54_00140 PF13361 UvrD-like helicase C-terminal domain K9N54_00145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K9N54_00175 PF13419 Haloacid dehalogenase-like hydrolase K9N54_00180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_00180 PF00005 ABC transporter K9N54_00185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_00190 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_00195 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_00195 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_00225 PF00069 Protein kinase domain K9N54_00230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K9N54_00230 PF00356 Bacterial regulatory proteins, lacI family K9N54_00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_00235 PF03466 LysR substrate binding domain K9N54_00240 PF00893 Small Multidrug Resistance protein K9N54_00245 PF00893 Small Multidrug Resistance protein K9N54_00250 PF00920 Dehydratase family K9N54_00255 PF01202 Shikimate kinase K9N54_00260 PF02447 GntP family permease K9N54_00265 PF01081 KDPG and KHG aldolase K9N54_00270 PF01048 Phosphorylase superfamily K9N54_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_00275 PF03466 LysR substrate binding domain K9N54_00280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K9N54_00280 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_00285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ K9N54_00290 PF01432 Peptidase family M3 K9N54_00295 PF01037 Lrp/AsnC ligand binding domain K9N54_00300 PF00990 Diguanylate cyclase, GGDEF domain K9N54_00300 PF00563 EAL domain K9N54_00300 PF08448 PAS fold K9N54_00305 PF04445 Putative SAM-dependent methyltransferase K9N54_00315 PF00892 EamA-like transporter family K9N54_00320 PF00582 Universal stress protein family K9N54_00325 PF00210 Ferritin-like domain K9N54_00330 PF10625 Universal stress protein B (UspB) K9N54_00340 PF00158 Sigma-54 interaction domain K9N54_00340 PF02954 Bacterial regulatory protein, Fis family K9N54_00340 PF01590 GAF domain K9N54_00345 PF04972 BON domain K9N54_00395 PF01594 AI-2E family transporter K9N54_00400 PF03707 Bacterial signalling protein N terminal repeat K9N54_00400 PF00563 EAL domain K9N54_00400 PF00990 Diguanylate cyclase, GGDEF domain K9N54_00410 PF02646 RmuC family K9N54_00415 PF01209 ubiE/COQ5 methyltransferase family K9N54_00420 PF02036 SCP-2 sterol transfer family K9N54_00425 PF03109 ABC1 family K9N54_00430 PF02416 mttA/Hcf106 family K9N54_00435 PF02416 mttA/Hcf106 family K9N54_00440 PF00902 Sec-independent protein translocase protein (TatC) K9N54_00445 PF01026 TatD related DNase K9N54_00450 PF00490 Delta-aminolevulinic acid dehydratase K9N54_00465 PF01367 5'-3' exonuclease, C-terminal SAM fold K9N54_00465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K9N54_00465 PF01612 3'-5' exonuclease K9N54_00465 PF00476 DNA polymerase family A K9N54_00470 PF01926 50S ribosome-binding GTPase K9N54_00475 PF00034 Cytochrome c K9N54_00485 PF04220 Der GTPase activator (YihI) K9N54_00490 PF10675 Protein of unknown function (DUF2489) K9N54_00495 PF04055 Radical SAM superfamily K9N54_00495 PF06969 HemN C-terminal domain K9N54_00500 PF00962 Adenosine/AMP deaminase K9N54_00505 PF00563 EAL domain K9N54_00505 PF00990 Diguanylate cyclase, GGDEF domain K9N54_00505 PF03707 Bacterial signalling protein N terminal repeat K9N54_00510 PF02954 Bacterial regulatory protein, Fis family K9N54_00510 PF00158 Sigma-54 interaction domain K9N54_00510 PF00072 Response regulator receiver domain K9N54_00515 PF00512 His Kinase A (phospho-acceptor) domain K9N54_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_00515 PF00989 PAS fold K9N54_00525 PF00120 Glutamine synthetase, catalytic domain K9N54_00525 PF03951 Glutamine synthetase, beta-Grasp domain K9N54_00530 PF00679 Elongation factor G C-terminus K9N54_00530 PF03144 Elongation factor Tu domain 2 K9N54_00530 PF00009 Elongation factor Tu GTP binding domain K9N54_00545 PF03631 Virulence factor BrkB K9N54_00550 PF02580 D-Tyr-tRNA(Tyr) deacylase K9N54_00555 PF00583 Acetyltransferase (GNAT) family K9N54_00555 PF09500 Putative thioesterase (yiiD_Cterm) K9N54_00565 PF01293 Phosphoenolpyruvate carboxykinase K9N54_00570 PF01430 Hsp33 protein K9N54_00575 PF01479 S4 domain K9N54_00580 PF11356 Type II secretion system protein C K9N54_00585 PF00263 Bacterial type II and III secretion system protein K9N54_00585 PF03958 Bacterial type II/III secretion system short domain K9N54_00590 PF00437 Type II/IV secretion system protein K9N54_00595 PF00482 Type II secretion system (T2SS), protein F K9N54_00600 PF07963 Prokaryotic N-terminal methylation motif K9N54_00600 PF08334 Type II secretion system (T2SS), protein G K9N54_00605 PF12019 Type II transport protein GspH K9N54_00610 PF07963 Prokaryotic N-terminal methylation motif K9N54_00610 PF02501 Type II secretion system (T2SS), protein I K9N54_00615 PF11612 Type II secretion system (T2SS), protein J K9N54_00615 PF07963 Prokaryotic N-terminal methylation motif K9N54_00620 PF03934 Type II secretion system (T2SS), protein K K9N54_00625 PF05134 Type II secretion system (T2SS), protein L K9N54_00625 PF12693 GspL periplasmic domain K9N54_00630 PF04612 Type II secretion system (T2SS), protein M K9N54_00635 PF01203 Type II secretion system (T2SS), protein N K9N54_00640 PF00459 Inositol monophosphatase family K9N54_00645 PF00293 NUDIX domain K9N54_00650 PF01521 Iron-sulphur cluster biosynthesis K9N54_00650 PF01106 NifU-like domain K9N54_00655 PF00156 Phosphoribosyl transferase domain K9N54_00660 PF00561 alpha/beta hydrolase fold K9N54_00670 PF17674 HHH domain K9N54_00670 PF00575 S1 RNA binding domain K9N54_00670 PF09371 Tex-like protein N-terminal domain K9N54_00670 PF16921 Tex protein YqgF-like domain K9N54_00680 PF01272 Transcription elongation factor, GreA/GreB, C-term K9N54_00680 PF03449 Transcription elongation factor, N-terminal K9N54_00690 PF00072 Response regulator receiver domain K9N54_00690 PF00486 Transcriptional regulatory protein, C terminal K9N54_00695 PF00672 HAMP domain K9N54_00695 PF00512 His Kinase A (phospho-acceptor) domain K9N54_00695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_00700 PF00860 Permease family K9N54_00705 PF00270 DEAD/DEAH box helicase K9N54_00705 PF00271 Helicase conserved C-terminal domain K9N54_00705 PF17191 RecG wedge domain K9N54_00710 PF12105 SpoU, rRNA methylase, C-terminal K9N54_00710 PF00588 SpoU rRNA Methylase family K9N54_00715 PF13291 ACT domain K9N54_00715 PF04607 Region found in RelA / SpoT proteins K9N54_00715 PF02824 TGS domain K9N54_00720 PF01192 RNA polymerase Rpb6 K9N54_00725 PF00625 Guanylate kinase K9N54_00740 PF02472 Biopolymer transport protein ExbD/TolR K9N54_00745 PF01618 MotA/TolQ/ExbB proton channel family K9N54_00760 PF07715 TonB-dependent Receptor Plug Domain K9N54_00760 PF00593 TonB dependent receptor K9N54_00765 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_00770 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_00770 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_00775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_00780 PF00005 ABC transporter K9N54_00780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_00785 PF00005 ABC transporter K9N54_00785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_00840 PF03755 YicC-like family, N-terminal region K9N54_00840 PF08340 Domain of unknown function (DUF1732) K9N54_00845 PF03725 3' exoribonuclease family, domain 2 K9N54_00845 PF01138 3' exoribonuclease family, domain 1 K9N54_00850 PF00156 Phosphoribosyl transferase domain K9N54_00855 PF03279 Bacterial lipid A biosynthesis acyltransferase K9N54_00860 PF00440 Bacterial regulatory proteins, tetR family K9N54_00865 PF04127 DNA / pantothenate metabolism flavoprotein K9N54_00865 PF02441 Flavoprotein K9N54_00870 PF00672 HAMP domain K9N54_00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_00870 PF17200 Single Cache domain 2 K9N54_00875 PF04002 RadC-like JAB domain K9N54_00880 PF00830 Ribosomal L28 family K9N54_00885 PF00471 Ribosomal protein L33 K9N54_00895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K9N54_00895 PF06827 Zinc finger found in FPG and IleRS K9N54_00895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K9N54_00900 PF05686 Glycosyl transferase family 90 K9N54_00905 PF01467 Cytidylyltransferase-like K9N54_00910 PF13439 Glycosyltransferase Family 4 K9N54_00910 PF00534 Glycosyl transferases group 1 K9N54_00915 PF00535 Glycosyl transferase family 2 K9N54_00920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K9N54_00925 PF01219 Prokaryotic diacylglycerol kinase K9N54_00935 PF16363 GDP-mannose 4,6 dehydratase K9N54_00940 PF00483 Nucleotidyl transferase K9N54_00945 PF05523 WxcM-like, C-terminal K9N54_00950 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_00955 PF01575 MaoC like domain K9N54_00960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K9N54_00975 PF13439 Glycosyltransferase Family 4 K9N54_00975 PF00534 Glycosyl transferases group 1 K9N54_00985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K9N54_00990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K9N54_00995 PF03279 Bacterial lipid A biosynthesis acyltransferase K9N54_01000 PF01370 NAD dependent epimerase/dehydratase family K9N54_01005 PF06082 Exopolysaccharide biosynthesis protein YbjH K9N54_01050 PF08485 Polysaccharide biosynthesis protein C-terminal K9N54_01050 PF02719 Polysaccharide biosynthesis protein K9N54_01055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K9N54_01060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K9N54_01065 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_01065 PF12464 Maltose acetyltransferase K9N54_01070 PF00535 Glycosyl transferase family 2 K9N54_01085 PF00535 Glycosyl transferase family 2 K9N54_01090 PF13439 Glycosyltransferase Family 4 K9N54_01105 PF01370 NAD dependent epimerase/dehydratase family K9N54_01110 PF02397 Bacterial sugar transferase K9N54_01115 PF02719 Polysaccharide biosynthesis protein K9N54_01120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain K9N54_01120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain K9N54_01120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain K9N54_01125 PF00483 Nucleotidyl transferase K9N54_01165 PF00121 Triosephosphate isomerase K9N54_01185 PF00455 DeoR C terminal sensor domain K9N54_01185 PF08220 DeoR-like helix-turn-helix domain K9N54_01190 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K9N54_01195 PF06005 Cell division protein ZapB K9N54_01200 PF03737 Aldolase/RraA K9N54_01205 PF01040 UbiA prenyltransferase family K9N54_01235 PF04002 RadC-like JAB domain K9N54_01250 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_01250 PF07724 AAA domain (Cdc48 subfamily) K9N54_01255 PF00227 Proteasome subunit K9N54_01265 PF00356 Bacterial regulatory proteins, lacI family K9N54_01270 PF00270 DEAD/DEAH box helicase K9N54_01270 PF17764 3′ DNA-binding domain (3′BD) K9N54_01270 PF18074 Primosomal protein N C-terminal domain K9N54_01270 PF00271 Helicase conserved C-terminal domain K9N54_01270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K9N54_01275 PF01197 Ribosomal protein L31 K9N54_01280 PF00338 Ribosomal protein S10p/S20e K9N54_01285 PF00297 Ribosomal protein L3 K9N54_01290 PF00573 Ribosomal protein L4/L1 family K9N54_01295 PF00276 Ribosomal protein L23 K9N54_01300 PF00181 Ribosomal Proteins L2, RNA binding domain K9N54_01300 PF03947 Ribosomal Proteins L2, C-terminal domain K9N54_01305 PF00203 Ribosomal protein S19 K9N54_01310 PF00237 Ribosomal protein L22p/L17e K9N54_01315 PF07650 KH domain K9N54_01315 PF00189 Ribosomal protein S3, C-terminal domain K9N54_01320 PF00252 Ribosomal protein L16p/L10e K9N54_01325 PF00831 Ribosomal L29 protein K9N54_01330 PF00366 Ribosomal protein S17 K9N54_01335 PF00238 Ribosomal protein L14p/L23e K9N54_01340 PF00467 KOW motif K9N54_01340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K9N54_01345 PF00281 Ribosomal protein L5 K9N54_01345 PF00673 ribosomal L5P family C-terminus K9N54_01350 PF00253 Ribosomal protein S14p/S29e K9N54_01355 PF00410 Ribosomal protein S8 K9N54_01360 PF00347 Ribosomal protein L6 K9N54_01365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K9N54_01370 PF00333 Ribosomal protein S5, N-terminal domain K9N54_01370 PF03719 Ribosomal protein S5, C-terminal domain K9N54_01375 PF00327 Ribosomal protein L30p/L7e K9N54_01380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K9N54_01385 PF00344 SecY translocase K9N54_01390 PF00444 Ribosomal protein L36 K9N54_01395 PF00416 Ribosomal protein S13/S18 K9N54_01400 PF00411 Ribosomal protein S11 K9N54_01405 PF01479 S4 domain K9N54_01405 PF00163 Ribosomal protein S4/S9 N-terminal domain K9N54_01410 PF01000 RNA polymerase Rpb3/RpoA insert domain K9N54_01410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K9N54_01410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K9N54_01415 PF01196 Ribosomal protein L17 K9N54_01425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K9N54_01425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_01435 PF13673 Acetyltransferase (GNAT) domain K9N54_01440 PF03880 DbpA RNA binding domain K9N54_01440 PF00270 DEAD/DEAH box helicase K9N54_01440 PF00271 Helicase conserved C-terminal domain K9N54_01450 PF02872 5'-nucleotidase, C-terminal domain K9N54_01450 PF00149 Calcineurin-like phosphoesterase K9N54_01455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K9N54_01455 PF10414 Sirohaem synthase dimerisation region K9N54_01455 PF14824 Sirohaem biosynthesis protein central K9N54_01460 PF01507 Phosphoadenosine phosphosulfate reductase family K9N54_01465 PF00009 Elongation factor Tu GTP binding domain K9N54_01470 PF02080 TrkA-C domain K9N54_01470 PF03600 Citrate transporter K9N54_01495 PF00005 ABC transporter K9N54_01505 PF10795 Protein of unknown function (DUF2607) K9N54_01510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K9N54_01515 PF06526 Protein of unknown function (DUF1107) K9N54_01520 PF01625 Peptide methionine sulfoxide reductase K9N54_01525 PF01103 Surface antigen K9N54_01525 PF17243 POTRA domain TamA domain 1 K9N54_01530 PF04357 TamB, inner membrane protein subunit of TAM complex K9N54_01535 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like K9N54_01545 PF00719 Inorganic pyrophosphatase K9N54_01550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain K9N54_01555 PF01225 Mur ligase family, catalytic domain K9N54_01555 PF02875 Mur ligase family, glutamate ligase domain K9N54_01555 PF08245 Mur ligase middle domain K9N54_01560 PF02441 Flavoprotein K9N54_01570 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_01575 PF00005 ABC transporter K9N54_01590 PF16868 NMT1-like family K9N54_01595 PF01316 Arginine repressor, DNA binding domain K9N54_01595 PF02863 Arginine repressor, C-terminal domain K9N54_01600 PF00056 lactate/malate dehydrogenase, NAD binding domain K9N54_01600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K9N54_01610 PF00348 Polyprenyl synthetase K9N54_01615 PF00829 Ribosomal prokaryotic L21 protein K9N54_01620 PF01016 Ribosomal L27 protein K9N54_01625 PF01018 GTP1/OBG K9N54_01625 PF01926 50S ribosome-binding GTPase K9N54_01630 PF06738 Putative threonine/serine exporter K9N54_01635 PF12821 Threonine/Serine exporter, ThrE K9N54_01640 PF00186 Dihydrofolate reductase K9N54_01645 PF00149 Calcineurin-like phosphoesterase K9N54_01650 PF04379 ApaG domain K9N54_01655 PF00398 Ribosomal RNA adenine dimethylase K9N54_01660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K9N54_01665 PF09312 SurA N-terminal domain K9N54_01670 PF04453 LPS transport system D K9N54_01670 PF03968 OstA-like protein K9N54_01675 PF00226 DnaJ domain K9N54_01675 PF05099 Tellurite resistance protein TerB K9N54_01685 PF00694 Aconitase C-terminal domain K9N54_01690 PF00330 Aconitase family (aconitate hydratase) K9N54_01695 PF00180 Isocitrate/isopropylmalate dehydrogenase K9N54_01700 PF00682 HMGL-like K9N54_01700 PF08502 LeuA allosteric (dimerisation) domain K9N54_01710 PF01569 PAP2 superfamily K9N54_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_01720 PF03466 LysR substrate binding domain K9N54_01725 PF00501 AMP-binding enzyme K9N54_01730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K9N54_01730 PF00205 Thiamine pyrophosphate enzyme, central domain K9N54_01730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K9N54_01735 PF10369 Small subunit of acetolactate synthase K9N54_01740 PF00990 Diguanylate cyclase, GGDEF domain K9N54_01750 PF02887 Pyruvate kinase, alpha/beta domain K9N54_01750 PF00224 Pyruvate kinase, barrel domain K9N54_01755 PF08220 DeoR-like helix-turn-helix domain K9N54_01755 PF00455 DeoR C terminal sensor domain K9N54_01760 PF01380 SIS domain K9N54_01770 PF00486 Transcriptional regulatory protein, C terminal K9N54_01770 PF00072 Response regulator receiver domain K9N54_01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_01775 PF00672 HAMP domain K9N54_01775 PF00512 His Kinase A (phospho-acceptor) domain K9N54_01780 PF13419 Haloacid dehalogenase-like hydrolase K9N54_01785 PF05068 Mannitol repressor K9N54_01790 PF01232 Mannitol dehydrogenase Rossmann domain K9N54_01790 PF08125 Mannitol dehydrogenase C-terminal domain K9N54_01795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_01795 PF02378 Phosphotransferase system, EIIC K9N54_01795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_01825 PF03180 NLPA lipoprotein K9N54_01870 PF01420 Type I restriction modification DNA specificity domain K9N54_01920 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K9N54_01920 PF11867 Domain of unknown function (DUF3387) K9N54_01920 PF18766 SWI2/SNF2 ATPase K9N54_01940 PF01381 Helix-turn-helix K9N54_01950 PF12161 HsdM N-terminal domain K9N54_01950 PF02384 N-6 DNA Methylase K9N54_01970 PF01555 DNA methylase K9N54_01975 PF04851 Type III restriction enzyme, res subunit K9N54_01975 PF08463 EcoEI R protein C-terminal K9N54_01975 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) K9N54_01975 PF00271 Helicase conserved C-terminal domain K9N54_02015 PF04539 Sigma-70 region 3 K9N54_02015 PF04545 Sigma-70, region 4 K9N54_02015 PF00140 Sigma-70 factor, region 1.2 K9N54_02015 PF03979 Sigma-70 factor, region 1.1 K9N54_02015 PF04546 Sigma-70, non-essential region K9N54_02015 PF04542 Sigma-70 region 2 K9N54_02020 PF10410 DnaB-helicase binding domain of primase K9N54_02020 PF08278 DNA primase DnaG DnaB-binding K9N54_02020 PF08275 DNA primase catalytic core, N-terminal domain K9N54_02020 PF01807 CHC2 zinc finger K9N54_02025 PF09424 Yqey-like protein K9N54_02030 PF01165 Ribosomal protein S21 K9N54_02035 PF00814 Glycoprotease family K9N54_02040 PF12697 Alpha/beta hydrolase family K9N54_02045 PF02660 Glycerol-3-phosphate acyltransferase K9N54_02050 PF02152 Dihydroneopterin aldolase K9N54_02055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K9N54_02060 PF02673 Bacitracin resistance protein BacA K9N54_02065 PF01743 Poly A polymerase head domain K9N54_02065 PF12627 Probable RNA and SrmB- binding site of polymerase A K9N54_02065 PF01966 HD domain K9N54_02070 PF13401 AAA domain K9N54_02070 PF01471 Putative peptidoglycan binding domain K9N54_02080 PF08239 Bacterial SH3 domain K9N54_02085 PF01384 Phosphate transporter family K9N54_02090 PF01865 Protein of unknown function DUF47 K9N54_02095 PF01928 CYTH domain K9N54_02105 PF00672 HAMP domain K9N54_02105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_02110 PF08335 GlnD PII-uridylyltransferase K9N54_02110 PF03710 Glutamate-ammonia ligase adenylyltransferase K9N54_02115 PF00294 pfkB family carbohydrate kinase K9N54_02115 PF01467 Cytidylyltransferase-like K9N54_02120 PF02321 Outer membrane efflux protein K9N54_02125 PF00293 NUDIX domain K9N54_02130 PF06853 Protein of unknown function (DUF1249) K9N54_02135 PF00149 Calcineurin-like phosphoesterase K9N54_02140 PF05728 Uncharacterised protein family (UPF0227) K9N54_02145 PF01751 Toprim domain K9N54_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_02145 PF00986 DNA gyrase B subunit, carboxyl terminus K9N54_02145 PF00204 DNA gyrase B K9N54_02150 PF00521 DNA gyrase/topoisomerase IV, subunit A K9N54_02150 PF03989 DNA gyrase C-terminal domain, beta-propeller K9N54_02155 PF13180 PDZ domain K9N54_02160 PF00595 PDZ domain K9N54_02165 PF06295 Protein of unknown function (DUF1043) K9N54_02170 PF03969 AFG1-like ATPase K9N54_02175 PF00572 Ribosomal protein L13 K9N54_02180 PF00380 Ribosomal protein S9/S16 K9N54_02185 PF00355 Rieske [2Fe-2S] domain K9N54_02185 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K9N54_02190 PF00033 Cytochrome b/b6/petB K9N54_02190 PF00032 Cytochrome b(C-terminal)/b6/petD K9N54_02195 PF02167 Cytochrome C1 family K9N54_02200 PF00043 Glutathione S-transferase, C-terminal domain K9N54_02200 PF02798 Glutathione S-transferase, N-terminal domain K9N54_02205 PF04386 Stringent starvation protein B K9N54_02210 PF04972 BON domain K9N54_02215 PF13580 SIS domain K9N54_02220 PF02021 Uncharacterised protein family UPF0102 K9N54_02225 PF04348 LppC putative lipoprotein K9N54_02230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K9N54_02240 PF01795 MraW methylase family K9N54_02245 PF04999 Cell division protein FtsL K9N54_02250 PF00905 Penicillin binding protein transpeptidase domain K9N54_02250 PF03717 Penicillin-binding Protein dimerisation domain K9N54_02255 PF02875 Mur ligase family, glutamate ligase domain K9N54_02255 PF01225 Mur ligase family, catalytic domain K9N54_02255 PF08245 Mur ligase middle domain K9N54_02260 PF01225 Mur ligase family, catalytic domain K9N54_02260 PF02875 Mur ligase family, glutamate ligase domain K9N54_02260 PF08245 Mur ligase middle domain K9N54_02265 PF00953 Glycosyl transferase family 4 K9N54_02265 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K9N54_02270 PF08245 Mur ligase middle domain K9N54_02270 PF02875 Mur ligase family, glutamate ligase domain K9N54_02275 PF01098 Cell cycle protein K9N54_02280 PF04101 Glycosyltransferase family 28 C-terminal domain K9N54_02280 PF03033 Glycosyltransferase family 28 N-terminal domain K9N54_02285 PF01225 Mur ligase family, catalytic domain K9N54_02285 PF02875 Mur ligase family, glutamate ligase domain K9N54_02285 PF08245 Mur ligase middle domain K9N54_02290 PF03799 Cell division protein FtsQ K9N54_02290 PF08478 POTRA domain, FtsQ-type K9N54_02295 PF02491 SHS2 domain inserted in FTSA K9N54_02300 PF00091 Tubulin/FtsZ family, GTPase domain K9N54_02300 PF12327 FtsZ family, C-terminal domain K9N54_02305 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K9N54_02315 PF02810 SEC-C motif K9N54_02315 PF07517 SecA DEAD-like domain K9N54_02315 PF01043 SecA preprotein cross-linking domain K9N54_02315 PF07516 SecA Wing and Scaffold domain K9N54_02320 PF00293 NUDIX domain K9N54_02325 PF05173 Dihydrodipicolinate reductase, C-terminus K9N54_02325 PF01113 Dihydrodipicolinate reductase, N-terminus K9N54_02330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K9N54_02330 PF00117 Glutamine amidotransferase class-I K9N54_02335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K9N54_02335 PF02142 MGS-like domain K9N54_02335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K9N54_02350 PF01925 Sulfite exporter TauE/SafE K9N54_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_02355 PF03466 LysR substrate binding domain K9N54_02360 PF03458 UPF0126 domain K9N54_02365 PF01497 Periplasmic binding protein K9N54_02370 PF03186 CobD/Cbib protein K9N54_02370 PF17113 Regulatory signalling modulator protein AmpE K9N54_02375 PF01048 Phosphorylase superfamily K9N54_02385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K9N54_02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_02390 PF01645 Conserved region in glutamate synthase K9N54_02390 PF00310 Glutamine amidotransferases class-II K9N54_02390 PF04898 Glutamate synthase central domain K9N54_02390 PF01493 GXGXG motif K9N54_02395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K9N54_02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_02400 PF01493 GXGXG motif K9N54_02400 PF01645 Conserved region in glutamate synthase K9N54_02400 PF00310 Glutamine amidotransferases class-II K9N54_02400 PF04898 Glutamate synthase central domain K9N54_02405 PF04055 Radical SAM superfamily K9N54_02405 PF16199 Radical_SAM C-terminal domain K9N54_02410 PF00360 Phytochrome region K9N54_02410 PF00563 EAL domain K9N54_02410 PF01590 GAF domain K9N54_02410 PF00990 Diguanylate cyclase, GGDEF domain K9N54_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_02415 PF00512 His Kinase A (phospho-acceptor) domain K9N54_02415 PF18415 Histidine kinase receptor ArcB trans-membrane domain K9N54_02415 PF01627 Hpt domain K9N54_02415 PF00989 PAS fold K9N54_02415 PF00072 Response regulator receiver domain K9N54_02425 PF00072 Response regulator receiver domain K9N54_02425 PF00486 Transcriptional regulatory protein, C terminal K9N54_02435 PF03737 Aldolase/RraA K9N54_02445 PF03447 Homoserine dehydrogenase, NAD binding domain K9N54_02445 PF00742 Homoserine dehydrogenase K9N54_02445 PF01842 ACT domain K9N54_02445 PF00696 Amino acid kinase family K9N54_02445 PF13840 ACT domain K9N54_02450 PF08544 GHMP kinases C terminal K9N54_02450 PF00288 GHMP kinases N terminal domain K9N54_02455 PF14821 Threonine synthase N terminus K9N54_02455 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_02460 PF01228 Glycine radical K9N54_02465 PF01261 Xylose isomerase-like TIM barrel K9N54_02470 PF03167 Uracil DNA glycosylase superfamily K9N54_02485 PF01235 Sodium:alanine symporter family K9N54_02490 PF03883 Peroxide stress protein YaaA K9N54_02495 PF00271 Helicase conserved C-terminal domain K9N54_02495 PF00270 DEAD/DEAH box helicase K9N54_02500 PF05175 Methyltransferase small domain K9N54_02505 PF05525 Branched-chain amino acid transport protein K9N54_02510 PF00258 Flavodoxin K9N54_02515 PF00589 Phage integrase family K9N54_02515 PF02899 Phage integrase, N-terminal SAM-like domain K9N54_02520 PF10411 Disulfide bond isomerase protein N-terminus K9N54_02520 PF13098 Thioredoxin-like domain K9N54_02525 PF01368 DHH family K9N54_02525 PF02272 DHHA1 domain K9N54_02525 PF17768 RecJ OB domain K9N54_02535 PF00152 tRNA synthetases class II (D, K and N) K9N54_02535 PF01336 OB-fold nucleic acid binding domain K9N54_02540 PF00072 Response regulator receiver domain K9N54_02540 PF00158 Sigma-54 interaction domain K9N54_02540 PF02954 Bacterial regulatory protein, Fis family K9N54_02550 PF00248 Aldo/keto reductase family K9N54_02560 PF02976 DNA mismatch repair enzyme MutH K9N54_02565 PF00293 NUDIX domain K9N54_02570 PF01590 GAF domain K9N54_02570 PF05524 PEP-utilising enzyme, N-terminal K9N54_02570 PF00391 PEP-utilising enzyme, mobile domain K9N54_02570 PF02896 PEP-utilising enzyme, TIM barrel domain K9N54_02575 PF01925 Sulfite exporter TauE/SafE K9N54_02580 PF01790 Prolipoprotein diacylglyceryl transferase K9N54_02585 PF00303 Thymidylate synthase K9N54_02595 PF02690 Na+/Pi-cotransporter K9N54_02600 PF03466 LysR substrate binding domain K9N54_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_02605 PF01022 Bacterial regulatory protein, arsR family K9N54_02610 PF01649 Ribosomal protein S20 K9N54_02615 PF03023 Lipid II flippase MurJ K9N54_02620 PF01687 Riboflavin kinase K9N54_02620 PF06574 FAD synthetase K9N54_02625 PF08264 Anticodon-binding domain of tRNA K9N54_02625 PF00133 tRNA synthetases class I (I, L, M and V) K9N54_02625 PF06827 Zinc finger found in FPG and IleRS K9N54_02630 PF01252 Signal peptidase (SPase) II K9N54_02635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_02640 PF02401 LytB protein K9N54_02645 PF04397 LytTr DNA-binding domain K9N54_02645 PF00072 Response regulator receiver domain K9N54_02650 PF06580 Histidine kinase K9N54_02650 PF07694 5TMR of 5TMR-LYT K9N54_02655 PF02554 Carbon starvation protein CstA K9N54_02670 PF13580 SIS domain K9N54_02675 PF03702 Anhydro-N-acetylmuramic acid kinase K9N54_02680 PF00933 Glycosyl hydrolase family 3 N terminal domain K9N54_02685 PF00793 DAHP synthetase I family K9N54_02690 PF01817 Chorismate mutase type II K9N54_02690 PF02153 Prephenate dehydrogenase K9N54_02695 PF01551 Peptidase family M23 K9N54_02695 PF04225 Opacity-associated protein A LysM-like domain K9N54_02700 PF07238 PilZ domain K9N54_02705 PF00005 ABC transporter K9N54_02705 PF12848 ABC transporter K9N54_02710 PF01464 Transglycosylase SLT domain K9N54_02710 PF14718 Soluble lytic murein transglycosylase L domain K9N54_02715 PF01371 Trp repressor protein K9N54_02720 PF01931 Protein of unknown function DUF84 K9N54_02725 PF01817 Chorismate mutase type II K9N54_02725 PF00800 Prephenate dehydratase K9N54_02730 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K9N54_02735 PF01551 Peptidase family M23 K9N54_02735 PF10145 Phage-related minor tail protein K9N54_02735 PF01464 Transglycosylase SLT domain K9N54_02740 PF13525 Outer membrane lipoprotein K9N54_02745 PF01479 S4 domain K9N54_02745 PF00849 RNA pseudouridylate synthase K9N54_02750 PF02578 Multi-copper polyphenol oxidoreductase laccase K9N54_02755 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_02755 PF10431 C-terminal, D2-small domain, of ClpB protein K9N54_02755 PF02861 Clp amino terminal domain, pathogenicity island component K9N54_02755 PF17871 AAA lid domain K9N54_02755 PF07724 AAA domain (Cdc48 subfamily) K9N54_02800 PF03411 Penicillin-insensitive murein endopeptidase K9N54_02810 PF00037 4Fe-4S binding domain K9N54_02815 PF16325 Peptidase family U32 C-terminal domain K9N54_02815 PF01136 Peptidase family U32 K9N54_02820 PF04381 Putative exonuclease, RdgC K9N54_02825 PF00486 Transcriptional regulatory protein, C terminal K9N54_02825 PF00072 Response regulator receiver domain K9N54_02830 PF00989 PAS fold K9N54_02830 PF00512 His Kinase A (phospho-acceptor) domain K9N54_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_02830 PF11808 Phosphate regulon sensor protein PhoR K9N54_02835 PF12849 PBP superfamily domain K9N54_02840 PF02541 Ppx/GppA phosphatase family K9N54_02845 PF13089 Polyphosphate kinase N-terminal domain K9N54_02845 PF17941 Polyphosphate kinase C-terminal domain 1 K9N54_02845 PF13090 Polyphosphate kinase C-terminal domain 2 K9N54_02845 PF02503 Polyphosphate kinase middle domain K9N54_02850 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_02855 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_02860 PF00005 ABC transporter K9N54_02865 PF01895 PhoU domain K9N54_02870 PF03976 Polyphosphate kinase 2 (PPK2) K9N54_02875 PF03932 CutC family K9N54_02880 PF10417 C-terminal domain of 1-Cys peroxiredoxin K9N54_02880 PF00578 AhpC/TSA family K9N54_02885 PF03466 LysR substrate binding domain K9N54_02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_02890 PF01274 Malate synthase K9N54_02895 PF00463 Isocitrate lyase family K9N54_02900 PF00571 CBS domain K9N54_02910 PF02547 Queuosine biosynthesis protein K9N54_02915 PF01702 Queuine tRNA-ribosyltransferase K9N54_02920 PF02699 Preprotein translocase subunit K9N54_02925 PF13721 SecD export protein N-terminal TM region K9N54_02925 PF02355 Protein export membrane protein K9N54_02925 PF07549 SecD/SecF GG Motif K9N54_02930 PF02355 Protein export membrane protein K9N54_02930 PF07549 SecD/SecF GG Motif K9N54_02935 PF00459 Inositol monophosphatase family K9N54_02940 PF00588 SpoU rRNA Methylase family K9N54_02945 PF02082 Transcriptional regulator K9N54_02950 PF00266 Aminotransferase class-V K9N54_02955 PF01592 NifU-like N terminal domain K9N54_02960 PF01521 Iron-sulphur cluster biosynthesis K9N54_02965 PF00226 DnaJ domain K9N54_02965 PF07743 HSCB C-terminal oligomerisation domain K9N54_02970 PF00012 Hsp70 protein K9N54_02975 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_02980 PF04384 Iron-sulphur cluster assembly K9N54_02985 PF00883 Cytosol aminopeptidase family, catalytic domain K9N54_02985 PF12404 Peptidase K9N54_02990 PF00334 Nucleoside diphosphate kinase K9N54_02995 PF04055 Radical SAM superfamily K9N54_03000 PF13464 Domain of unknown function (DUF4115) K9N54_03005 PF04551 GcpE protein K9N54_03010 PF03129 Anticodon binding domain K9N54_03010 PF13393 Histidyl-tRNA synthetase K9N54_03015 PF09976 Tetratricopeptide repeat-like domain K9N54_03020 PF13360 PQQ-like domain K9N54_03025 PF01926 50S ribosome-binding GTPase K9N54_03025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K9N54_03040 PF13742 OB-fold nucleic acid binding domain K9N54_03040 PF02601 Exonuclease VII, large subunit K9N54_03045 PF00571 CBS domain K9N54_03045 PF00478 IMP dehydrogenase / GMP reductase domain K9N54_03050 PF00117 Glutamine amidotransferase class-I K9N54_03050 PF02540 NAD synthase K9N54_03050 PF00958 GMP synthase C terminal domain K9N54_03055 PF03553 Na+/H+ antiporter family K9N54_03060 PF06483 Chitinase C K9N54_03060 PF00704 Glycosyl hydrolases family 18 K9N54_03065 PF01184 GPR1/FUN34/yaaH family K9N54_03075 PF01235 Sodium:alanine symporter family K9N54_03080 PF01266 FAD dependent oxidoreductase K9N54_03085 PF03466 LysR substrate binding domain K9N54_03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_03100 PF07969 Amidohydrolase family K9N54_03105 PF01053 Cys/Met metabolism PLP-dependent enzyme K9N54_03110 PF00202 Aminotransferase class-III K9N54_03130 PF00795 Carbon-nitrogen hydrolase K9N54_03130 PF00583 Acetyltransferase (GNAT) family K9N54_03135 PF03466 LysR substrate binding domain K9N54_03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_03175 PF04002 RadC-like JAB domain K9N54_03230 PF13340 Putative transposase of IS4/5 family (DUF4096) K9N54_03235 PF07745 Glycosyl hydrolase family 53 K9N54_03240 PF00356 Bacterial regulatory proteins, lacI family K9N54_03245 PF00005 ABC transporter K9N54_03245 PF17912 MalK OB fold domain K9N54_03250 PF13416 Bacterial extracellular solute-binding protein K9N54_03255 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_03260 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_03265 PF07745 Glycosyl hydrolase family 53 K9N54_03270 PF08533 Beta-galactosidase C-terminal domain K9N54_03270 PF08532 Beta-galactosidase trimerisation domain K9N54_03270 PF02449 Beta-galactosidase K9N54_03275 PF02264 LamB porin K9N54_03290 PF00135 Carboxylesterase family K9N54_03300 PF00589 Phage integrase family K9N54_03300 PF14659 Phage integrase, N-terminal SAM-like domain K9N54_03300 PF13356 Arm DNA-binding domain K9N54_03320 PF04717 Type VI secretion system, phage-baseplate injector K9N54_03360 PF02384 N-6 DNA Methylase K9N54_03360 PF12161 HsdM N-terminal domain K9N54_03365 PF00589 Phage integrase family K9N54_03365 PF13356 Arm DNA-binding domain K9N54_03375 PF01668 SmpB protein K9N54_03380 PF03364 Polyketide cyclase / dehydrase and lipid transport K9N54_03385 PF03658 RnfH family Ubiquitin K9N54_03390 PF04355 SmpA / OmlA family K9N54_03395 PF02463 RecF/RecN/SMC N terminal domain K9N54_03405 PF01513 ATP-NAD kinase K9N54_03410 PF01025 GrpE K9N54_03415 PF00375 Sodium:dicarboxylate symporter family K9N54_03420 PF00012 Hsp70 protein K9N54_03425 PF00226 DnaJ domain K9N54_03425 PF00684 DnaJ central domain K9N54_03425 PF01556 DnaJ C terminal domain K9N54_03430 PF07963 Prokaryotic N-terminal methylation motif K9N54_03430 PF00114 Pilin (bacterial filament) K9N54_03435 PF00114 Pilin (bacterial filament) K9N54_03435 PF07963 Prokaryotic N-terminal methylation motif K9N54_03455 PF03806 AbgT putative transporter family K9N54_03460 PF14437 MafB19-like deaminase K9N54_03465 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_03465 PF01464 Transglycosylase SLT domain K9N54_03470 PF02769 AIR synthase related protein, C-terminal domain K9N54_03470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal K9N54_03470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K9N54_03495 PF07687 Peptidase dimerisation domain K9N54_03495 PF01546 Peptidase family M20/M25/M40 K9N54_03500 PF00860 Permease family K9N54_03505 PF00156 Phosphoribosyl transferase domain K9N54_03510 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) K9N54_03515 PF07417 Sigma factor-binding transcriptional regulator Crl K9N54_03520 PF01472 PUA domain K9N54_03520 PF00696 Amino acid kinase family K9N54_03525 PF00171 Aldehyde dehydrogenase family K9N54_03530 PF03477 ATP cone domain K9N54_03535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K9N54_03535 PF01872 RibD C-terminal domain K9N54_03540 PF00677 Lumazine binding domain K9N54_03545 PF00925 GTP cyclohydrolase II K9N54_03545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K9N54_03550 PF00885 6,7-dimethyl-8-ribityllumazine synthase K9N54_03555 PF01029 NusB family K9N54_03560 PF00586 AIR synthase related protein, N-terminal domain K9N54_03560 PF02769 AIR synthase related protein, C-terminal domain K9N54_03565 PF04608 Phosphatidylglycerophosphatase A K9N54_03570 PF02780 Transketolase, C-terminal domain K9N54_03570 PF02779 Transketolase, pyrimidine binding domain K9N54_03570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K9N54_03575 PF00348 Polyprenyl synthetase K9N54_03580 PF02609 Exonuclease VII small subunit K9N54_03585 PF01618 MotA/TolQ/ExbB proton channel family K9N54_03590 PF00691 OmpA family K9N54_03595 PF02568 Thiamine biosynthesis protein (ThiI) K9N54_03595 PF02926 THUMP domain K9N54_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_03600 PF03466 LysR substrate binding domain K9N54_03610 PF04241 Protein of unknown function (DUF423) K9N54_03615 PF18125 RlmM ferredoxin-like domain K9N54_03615 PF01728 FtsJ-like methyltransferase K9N54_03620 PF01223 DNA/RNA non-specific endonuclease K9N54_03625 PF01367 5'-3' exonuclease, C-terminal SAM fold K9N54_03625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K9N54_03630 PF03641 Possible lysine decarboxylase K9N54_03630 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases K9N54_03630 PF11892 Domain of unknown function (DUF3412) K9N54_03635 PF00990 Diguanylate cyclase, GGDEF domain K9N54_03645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term K9N54_03645 PF14489 QueF-like protein K9N54_03650 PF07348 Syd protein (SUKH-2) K9N54_03655 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) K9N54_03660 PF03180 NLPA lipoprotein K9N54_03665 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_03670 PF00005 ABC transporter K9N54_03670 PF09383 NIL domain K9N54_03680 PF00356 Bacterial regulatory proteins, lacI family K9N54_03685 PF02378 Phosphotransferase system, EIIC K9N54_03685 PF00367 phosphotransferase system, EIIB K9N54_03690 PF00128 Alpha amylase, catalytic domain K9N54_03690 PF16657 Maltogenic Amylase, C-terminal domain K9N54_03705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K9N54_03705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K9N54_03710 PF00464 Serine hydroxymethyltransferase K9N54_03715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family K9N54_03715 PF04055 Radical SAM superfamily K9N54_03720 PF03099 Biotin/lipoate A/B protein ligase family K9N54_03725 PF04359 Protein of unknown function (DUF493) K9N54_03730 PF00768 D-alanyl-D-alanine carboxypeptidase K9N54_03730 PF07943 Penicillin-binding protein 5, C-terminal domain K9N54_03735 PF03330 Lytic transglycolase K9N54_03735 PF05036 Sporulation related domain K9N54_03740 PF01098 Cell cycle protein K9N54_03745 PF00905 Penicillin binding protein transpeptidase domain K9N54_03745 PF03717 Penicillin-binding Protein dimerisation domain K9N54_03750 PF02590 Predicted SPOUT methyltransferase K9N54_03760 PF14840 Processivity clamp loader gamma complex DNA pol III C-term K9N54_03760 PF06144 DNA polymerase III, delta subunit K9N54_03765 PF04390 Lipopolysaccharide-assembly K9N54_03770 PF00133 tRNA synthetases class I (I, L, M and V) K9N54_03770 PF13603 Leucyl-tRNA synthetase, Domain 2 K9N54_03770 PF08264 Anticodon-binding domain of tRNA K9N54_03775 PF07295 Zinc-ribbon containing domain K9N54_03780 PF00795 Carbon-nitrogen hydrolase K9N54_03785 PF00571 CBS domain K9N54_03785 PF03471 Transporter associated domain K9N54_03790 PF02130 Uncharacterized protein family UPF0054 K9N54_03795 PF02562 PhoH-like protein K9N54_03800 PF04055 Radical SAM superfamily K9N54_03800 PF00919 Uncharacterized protein family UPF0004 K9N54_03800 PF01938 TRAM domain K9N54_03805 PF01494 FAD binding domain K9N54_03920 PF01926 50S ribosome-binding GTPase K9N54_03920 PF06071 Protein of unknown function (DUF933) K9N54_03925 PF01195 Peptidyl-tRNA hydrolase K9N54_03930 PF14572 Phosphoribosyl synthetase-associated domain K9N54_03930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K9N54_03935 PF00288 GHMP kinases N terminal domain K9N54_03935 PF08544 GHMP kinases C terminal K9N54_03940 PF03550 Outer membrane lipoprotein LolB K9N54_03945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain K9N54_03945 PF01488 Shikimate / quinate 5-dehydrogenase K9N54_03945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain K9N54_03950 PF03462 PCRF domain K9N54_03950 PF00472 RF-1 domain K9N54_03955 PF13847 Methyltransferase domain K9N54_03955 PF17827 PrmC N-terminal domain K9N54_03960 PF04247 Invasion gene expression up-regulator, SirB K9N54_03965 PF13369 Transglutaminase-like superfamily K9N54_03970 PF00793 DAHP synthetase I family K9N54_03975 PF00149 Calcineurin-like phosphoesterase K9N54_03975 PF02872 5'-nucleotidase, C-terminal domain K9N54_03980 PF04073 Aminoacyl-tRNA editing domain K9N54_03985 PF00849 RNA pseudouridylate synthase K9N54_03985 PF01479 S4 domain K9N54_03990 PF01713 Smr domain K9N54_04010 PF02838 Glycosyl hydrolase family 20, domain 2 K9N54_04010 PF03173 Putative carbohydrate binding domain K9N54_04010 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain K9N54_04010 PF00728 Glycosyl hydrolase family 20, catalytic domain K9N54_04025 PF00403 Heavy-metal-associated domain K9N54_04030 PF13609 Gram-negative porin K9N54_04035 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K9N54_04040 PF00749 tRNA synthetases class I (E and Q), catalytic domain K9N54_04045 PF01389 OmpA-like transmembrane domain K9N54_04045 PF00691 OmpA family K9N54_04090 PF01584 CheW-like domain K9N54_04090 PF00072 Response regulator receiver domain K9N54_04095 PF01739 CheR methyltransferase, SAM binding domain K9N54_04095 PF03705 CheR methyltransferase, all-alpha domain K9N54_04100 PF00460 Flagella basal body rod protein K9N54_04105 PF00460 Flagella basal body rod protein K9N54_04105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_04110 PF13861 FlgD Tudor-like domain K9N54_04110 PF13860 FlgD Ig-like domain K9N54_04110 PF03963 Flagellar hook capping protein - N-terminal region K9N54_04115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_04115 PF00460 Flagella basal body rod protein K9N54_04115 PF07559 Flagellar basal body protein FlaE K9N54_04120 PF00460 Flagella basal body rod protein K9N54_04120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_04125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_04125 PF00460 Flagella basal body rod protein K9N54_04130 PF02107 Flagellar L-ring protein K9N54_04135 PF02119 Flagellar P-ring protein K9N54_04140 PF10135 Rod binding protein K9N54_04140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K9N54_04145 PF07196 Flagellin hook IN motif K9N54_04145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_04150 PF00669 Bacterial flagellin N-terminal helical region K9N54_04155 PF00700 Bacterial flagellin C-terminal helical region K9N54_04155 PF07196 Flagellin hook IN motif K9N54_04155 PF00669 Bacterial flagellin N-terminal helical region K9N54_04160 PF00700 Bacterial flagellin C-terminal helical region K9N54_04160 PF07196 Flagellin hook IN motif K9N54_04160 PF00669 Bacterial flagellin N-terminal helical region K9N54_04165 PF00700 Bacterial flagellin C-terminal helical region K9N54_04165 PF07196 Flagellin hook IN motif K9N54_04165 PF00669 Bacterial flagellin N-terminal helical region K9N54_04170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K9N54_04175 PF02896 PEP-utilising enzyme, TIM barrel domain K9N54_04175 PF00391 PEP-utilising enzyme, mobile domain K9N54_04175 PF05524 PEP-utilising enzyme, N-terminal K9N54_04180 PF00381 PTS HPr component phosphorylation site K9N54_04185 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_04195 PF04354 ZipA, C-terminal FtsZ-binding domain K9N54_04200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K9N54_04200 PF03120 NAD-dependent DNA ligase OB-fold domain K9N54_04200 PF01653 NAD-dependent DNA ligase adenylation domain K9N54_04200 PF00533 BRCA1 C Terminus (BRCT) domain K9N54_04200 PF12826 Helix-hairpin-helix motif K9N54_04205 PF03573 outer membrane porin, OprD family K9N54_04220 PF01145 SPFH domain / Band 7 family K9N54_04220 PF16200 C-terminal region of band_7 K9N54_04225 PF00085 Thioredoxin K9N54_04230 PF00106 short chain dehydrogenase K9N54_04235 PF08338 Domain of unknown function (DUF1731) K9N54_04235 PF01370 NAD dependent epimerase/dehydratase family K9N54_04240 PF07556 Protein of unknown function (DUF1538) K9N54_04245 PF07556 Protein of unknown function (DUF1538) K9N54_04260 PF12850 Calcineurin-like phosphoesterase superfamily domain K9N54_04275 PF17323 Trans-membrane regulatory protein ToxS K9N54_04280 PF00486 Transcriptional regulatory protein, C terminal K9N54_04285 PF00183 Hsp90 protein K9N54_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_04290 PF05191 Adenylate kinase, active site lid K9N54_04295 PF00762 Ferrochelatase K9N54_04300 PF00854 POT family K9N54_04305 PF02357 Transcription termination factor nusG K9N54_04310 PF00733 Asparagine synthase K9N54_04310 PF13537 Glutamine amidotransferase domain K9N54_04315 PF02254 TrkA-N domain K9N54_04315 PF00999 Sodium/hydrogen exchanger family K9N54_04320 PF00480 ROK family K9N54_04320 PF01047 MarR family K9N54_04325 PF01979 Amidohydrolase family K9N54_04330 PF00367 phosphotransferase system, EIIB K9N54_04330 PF02378 Phosphotransferase system, EIIC K9N54_04335 PF00749 tRNA synthetases class I (E and Q), catalytic domain K9N54_04335 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain K9N54_04340 PF01475 Ferric uptake regulator family K9N54_04350 PF00258 Flavodoxin K9N54_04360 PF12697 Alpha/beta hydrolase family K9N54_04365 PF03925 SeqA protein C-terminal domain K9N54_04365 PF17206 SeqA protein N-terminal domain K9N54_04370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K9N54_04370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K9N54_04370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K9N54_04370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K9N54_04380 PF01784 NIF3 (NGG1p interacting factor 3) K9N54_04385 PF00285 Citrate synthase, C-terminal domain K9N54_04390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K9N54_04395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K9N54_04400 PF00890 FAD binding domain K9N54_04400 PF02910 Fumarate reductase flavoprotein C-term K9N54_04405 PF13085 2Fe-2S iron-sulfur cluster binding domain K9N54_04410 PF16078 2-oxoglutarate dehydrogenase N-terminus K9N54_04410 PF16870 2-oxoglutarate dehydrogenase C-terminal K9N54_04410 PF02779 Transketolase, pyrimidine binding domain K9N54_04410 PF00676 Dehydrogenase E1 component K9N54_04415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K9N54_04415 PF00364 Biotin-requiring enzyme K9N54_04415 PF02817 e3 binding domain K9N54_04420 PF08442 ATP-grasp domain K9N54_04420 PF00549 CoA-ligase K9N54_04425 PF02629 CoA binding domain K9N54_04425 PF00549 CoA-ligase K9N54_04430 PF00950 ABC 3 transport family K9N54_04435 PF00005 ABC transporter K9N54_04440 PF01297 Zinc-uptake complex component A periplasmic K9N54_04445 PF02311 AraC-like ligand binding domain K9N54_04445 PF12833 Helix-turn-helix domain K9N54_04450 PF04023 FeoA domain K9N54_04455 PF02421 Ferrous iron transport protein B K9N54_04455 PF07670 Nucleoside recognition K9N54_04455 PF07664 Ferrous iron transport protein B C terminus K9N54_04455 PF17910 FeoB cytosolic helical domain K9N54_04470 PF05746 DALR anticodon binding domain K9N54_04470 PF00750 tRNA synthetases class I (R) K9N54_04470 PF03485 Arginyl tRNA synthetase N terminal domain K9N54_04475 PF06185 YecM protein K9N54_04480 PF01842 ACT domain K9N54_04480 PF00551 Formyl transferase K9N54_04485 PF13307 Helicase C-terminal domain K9N54_04485 PF04851 Type III restriction enzyme, res subunit K9N54_04490 PF00814 Glycoprotease family K9N54_04505 PF00561 alpha/beta hydrolase fold K9N54_04510 PF13193 AMP-binding enzyme C-terminal domain K9N54_04510 PF00501 AMP-binding enzyme K9N54_04515 PF01612 3'-5' exonuclease K9N54_04515 PF00570 HRDC domain K9N54_04520 PF03776 Septum formation topological specificity factor MinE K9N54_04525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K9N54_04530 PF03775 Septum formation inhibitor MinC, C-terminal domain K9N54_04530 PF05209 Septum formation inhibitor MinC, N-terminal domain K9N54_04535 PF05166 YcgL domain K9N54_04540 PF13406 Transglycosylase SLT domain K9N54_04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_04545 PF03466 LysR substrate binding domain K9N54_04550 PF01773 Na+ dependent nucleoside transporter N-terminus K9N54_04550 PF07670 Nucleoside recognition K9N54_04550 PF07662 Na+ dependent nucleoside transporter C-terminus K9N54_04555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K9N54_04555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K9N54_04570 PF00109 Beta-ketoacyl synthase, N-terminal domain K9N54_04570 PF02801 Beta-ketoacyl synthase, C-terminal domain K9N54_04580 PF07977 FabA-like domain K9N54_04585 PF00109 Beta-ketoacyl synthase, N-terminal domain K9N54_04585 PF02801 Beta-ketoacyl synthase, C-terminal domain K9N54_04610 PF00221 Aromatic amino acid lyase K9N54_04615 PF00535 Glycosyl transferase family 2 K9N54_04620 PF07977 FabA-like domain K9N54_04635 PF00550 Phosphopantetheine attachment site K9N54_04640 PF00550 Phosphopantetheine attachment site K9N54_04665 PF04820 Tryptophan halogenase K9N54_04675 PF00571 CBS domain K9N54_04675 PF03471 Transporter associated domain K9N54_04675 PF01595 Cyclin M transmembrane N-terminal domain K9N54_04680 PF00270 DEAD/DEAH box helicase K9N54_04680 PF00271 Helicase conserved C-terminal domain K9N54_04685 PF02080 TrkA-C domain K9N54_04685 PF02254 TrkA-N domain K9N54_04690 PF02386 Cation transport protein K9N54_04705 PF02696 Uncharacterized ACR, YdiU/UPF0061 family K9N54_04710 PF03480 Bacterial extracellular solute-binding protein, family 7 K9N54_04715 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K9N54_04720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K9N54_04730 PF02954 Bacterial regulatory protein, Fis family K9N54_04730 PF00072 Response regulator receiver domain K9N54_04730 PF00158 Sigma-54 interaction domain K9N54_04735 PF02743 Cache domain K9N54_04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_04735 PF00512 His Kinase A (phospho-acceptor) domain K9N54_04745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_04745 PF05698 Bacterial trigger factor protein (TF) C-terminus K9N54_04745 PF05697 Bacterial trigger factor protein (TF) K9N54_04750 PF00574 Clp protease K9N54_04755 PF10431 C-terminal, D2-small domain, of ClpB protein K9N54_04755 PF06689 ClpX C4-type zinc finger K9N54_04755 PF07724 AAA domain (Cdc48 subfamily) K9N54_04760 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_04760 PF05362 Lon protease (S16) C-terminal proteolytic domain K9N54_04760 PF02190 ATP-dependent protease La (LON) substrate-binding domain K9N54_04765 PF00216 Bacterial DNA-binding protein K9N54_04770 PF13145 PPIC-type PPIASE domain K9N54_04790 PF01966 HD domain K9N54_04790 PF13286 Phosphohydrolase-associated domain K9N54_04800 PF00155 Aminotransferase class I and II K9N54_04805 PF00425 chorismate binding enzyme K9N54_04810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K9N54_04810 PF16582 Middle domain of thiamine pyrophosphate K9N54_04810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K9N54_04815 PF12697 Alpha/beta hydrolase family K9N54_04820 PF00378 Enoyl-CoA hydratase/isomerase K9N54_04825 PF13378 Enolase C-terminal domain-like K9N54_04830 PF00501 AMP-binding enzyme K9N54_04830 PF13193 AMP-binding enzyme C-terminal domain K9N54_04840 PF03601 Conserved hypothetical protein 698 K9N54_04845 PF07690 Major Facilitator Superfamily K9N54_04890 PF13533 Biotin-lipoyl like K9N54_04895 PF00873 AcrB/AcrD/AcrF family K9N54_04915 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_04920 PF01037 Lrp/AsnC ligand binding domain K9N54_04920 PF13404 AsnC-type helix-turn-helix domain K9N54_04935 PF09619 Type III secretion system lipoprotein chaperone (YscW) K9N54_04940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K9N54_04950 PF00990 Diguanylate cyclase, GGDEF domain K9N54_04950 PF17152 Periplasmic sensor domain K9N54_05010 PF01381 Helix-turn-helix K9N54_05015 PF02796 Helix-turn-helix domain of resolvase K9N54_05015 PF00239 Resolvase, N terminal domain K9N54_05070 PF08032 RNA 2'-O ribose methyltransferase substrate binding K9N54_05070 PF00588 SpoU rRNA Methylase family K9N54_05075 PF00037 4Fe-4S binding domain K9N54_05075 PF11953 Domain of unknown function (DUF3470) K9N54_05085 PF00478 IMP dehydrogenase / GMP reductase domain K9N54_05085 PF00571 CBS domain K9N54_05090 PF00403 Heavy-metal-associated domain K9N54_05095 PF01048 Phosphorylase superfamily K9N54_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_05105 PF00672 HAMP domain K9N54_05110 PF01230 HIT domain K9N54_05125 PF13036 Peptidoglycan-synthase activator LpoB K9N54_05125 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K9N54_05135 PF05728 Uncharacterised protein family (UPF0227) K9N54_05140 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_05155 PF00271 Helicase conserved C-terminal domain K9N54_05155 PF03461 TRCF domain K9N54_05155 PF02559 CarD-like/TRCF domain K9N54_05155 PF00270 DEAD/DEAH box helicase K9N54_05155 PF17757 UvrB interaction domain K9N54_05165 PF12704 MacB-like periplasmic core domain K9N54_05165 PF02687 FtsX-like permease family K9N54_05170 PF00005 ABC transporter K9N54_05175 PF02687 FtsX-like permease family K9N54_05175 PF12704 MacB-like periplasmic core domain K9N54_05185 PF03772 Competence protein K9N54_05185 PF13567 Domain of unknown function (DUF4131) K9N54_05185 PF00753 Metallo-beta-lactamase superfamily K9N54_05190 PF00005 ABC transporter K9N54_05190 PF00664 ABC transporter transmembrane region K9N54_05195 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K9N54_05200 PF03966 Trm112p-like protein K9N54_05205 PF02348 Cytidylyltransferase K9N54_05210 PF04293 SpoVR like protein K9N54_05215 PF04285 Protein of unknown function (DUF444) K9N54_05220 PF08298 PrkA AAA domain K9N54_05220 PF06798 PrkA serine protein kinase C-terminal domain K9N54_05225 PF03887 YfbU domain K9N54_05235 PF04055 Radical SAM superfamily K9N54_05245 PF02901 Pyruvate formate lyase-like K9N54_05245 PF01228 Glycine radical K9N54_05260 PF00005 ABC transporter K9N54_05265 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_05270 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_05275 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_05285 PF03372 Endonuclease/Exonuclease/phosphatase family K9N54_05290 PF10689 Protein of unknown function (DUF2496) K9N54_05295 PF07445 Primosomal replication protein priC K9N54_05300 PF01925 Sulfite exporter TauE/SafE K9N54_05305 PF06733 DEAD_2 K9N54_05305 PF13307 Helicase C-terminal domain K9N54_05315 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K9N54_05320 PF00849 RNA pseudouridylate synthase K9N54_05325 PF03971 Monomeric isocitrate dehydrogenase K9N54_05330 PF00313 'Cold-shock' DNA-binding domain K9N54_05335 PF02617 ATP-dependent Clp protease adaptor protein ClpS K9N54_05340 PF10431 C-terminal, D2-small domain, of ClpB protein K9N54_05340 PF02861 Clp amino terminal domain, pathogenicity island component K9N54_05340 PF17871 AAA lid domain K9N54_05340 PF07724 AAA domain (Cdc48 subfamily) K9N54_05340 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_05350 PF01176 Translation initiation factor 1A / IF-1 K9N54_05355 PF04376 Arginine-tRNA-protein transferase, N terminus K9N54_05355 PF04377 Arginine-tRNA-protein transferase, C terminus K9N54_05360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K9N54_05370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K9N54_05375 PF10692 Protein of unknown function (DUF2498) K9N54_05380 PF08272 Topoisomerase I zinc-ribbon-like K9N54_05380 PF01396 Topoisomerase DNA binding C4 zinc finger K9N54_05380 PF01751 Toprim domain K9N54_05380 PF01131 DNA topoisomerase K9N54_05385 PF00483 Nucleotidyl transferase K9N54_05390 PF08323 Starch synthase catalytic domain K9N54_05390 PF00534 Glycosyl transferases group 1 K9N54_05410 PF04993 TfoX N-terminal domain K9N54_05410 PF04994 TfoX C-terminal domain K9N54_05415 PF00356 Bacterial regulatory proteins, lacI family K9N54_05420 PF02613 Nitrate reductase delta subunit K9N54_05425 PF00486 Transcriptional regulatory protein, C terminal K9N54_05425 PF00072 Response regulator receiver domain K9N54_05430 PF02698 DUF218 domain K9N54_05435 PF13847 Methyltransferase domain K9N54_05440 PF03882 MukF winged-helix domain K9N54_05440 PF17193 MukF C-terminal domain K9N54_05440 PF17192 MukF middle domain K9N54_05445 PF04288 MukE-like family K9N54_05450 PF04310 MukB N-terminal K9N54_05450 PF16330 MukB hinge domain K9N54_05460 PF18030 RimK PreATP-grasp domain K9N54_05460 PF08443 RimK-like ATP-grasp domain K9N54_05470 PF18030 RimK PreATP-grasp domain K9N54_05470 PF08443 RimK-like ATP-grasp domain K9N54_05475 PF08003 Protein of unknown function (DUF1698) K9N54_05480 PF13649 Methyltransferase domain K9N54_05485 PF01904 Protein of unknown function DUF72 K9N54_05490 PF02938 GAD domain K9N54_05490 PF01336 OB-fold nucleic acid binding domain K9N54_05490 PF00152 tRNA synthetases class II (D, K and N) K9N54_05495 PF02075 Crossover junction endodeoxyribonuclease RuvC K9N54_05500 PF02203 Tar ligand binding domain homologue K9N54_05500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_05500 PF00672 HAMP domain K9N54_05505 PF01330 RuvA N terminal domain K9N54_05505 PF07499 RuvA, C-terminal domain K9N54_05510 PF05491 RuvB C-terminal winged helix domain K9N54_05510 PF17864 RuvB AAA lid domain K9N54_05510 PF05496 Holliday junction DNA helicase RuvB P-loop domain K9N54_05515 PF01654 Cytochrome bd terminal oxidase subunit I K9N54_05520 PF02322 Cytochrome bd terminal oxidase subunit II K9N54_05525 PF08173 Membrane bound YbgT-like protein K9N54_05535 PF03061 Thioesterase superfamily K9N54_05540 PF01618 MotA/TolQ/ExbB proton channel family K9N54_05545 PF02472 Biopolymer transport protein ExbD/TolR K9N54_05555 PF04052 TolB amino-terminal domain K9N54_05555 PF07676 WD40-like Beta Propeller Repeat K9N54_05560 PF00691 OmpA family K9N54_05565 PF13174 Tetratricopeptide repeat K9N54_05565 PF16331 TolA binding protein trimerisation K9N54_05570 PF02445 Quinolinate synthetase A protein K9N54_05590 PF03738 Glutathionylspermidine synthase preATP-grasp K9N54_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_05600 PF00512 His Kinase A (phospho-acceptor) domain K9N54_05600 PF09308 LuxQ, periplasmic K9N54_05600 PF00072 Response regulator receiver domain K9N54_05605 PF06610 L-alanine exporter K9N54_05665 PF00239 Resolvase, N terminal domain K9N54_05665 PF02796 Helix-turn-helix domain of resolvase K9N54_05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_05675 PF00672 HAMP domain K9N54_05675 PF12729 Four helix bundle sensory module for signal transduction K9N54_05680 PF00529 HlyD membrane-fusion protein of T1SS K9N54_05680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_05685 PF00873 AcrB/AcrD/AcrF family K9N54_05700 PF00579 tRNA synthetases class I (W and Y) K9N54_05715 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K9N54_05720 PF00005 ABC transporter K9N54_05735 PF03466 LysR substrate binding domain K9N54_05735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_05745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K9N54_05745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K9N54_05750 PF01037 Lrp/AsnC ligand binding domain K9N54_05755 PF01580 FtsK/SpoIIIE family K9N54_05755 PF09397 Ftsk gamma domain K9N54_05755 PF17854 FtsK alpha domain K9N54_05755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE K9N54_05760 PF03548 Outer membrane lipoprotein carrier protein LolA K9N54_05765 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_05765 PF12002 MgsA AAA+ ATPase C terminal K9N54_05765 PF16193 AAA C-terminal domain K9N54_05770 PF02403 Seryl-tRNA synthetase N-terminal domain K9N54_05770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K9N54_05785 PF01258 Prokaryotic dksA/traR C4-type zinc finger K9N54_05790 PF00202 Aminotransferase class-III K9N54_05795 PF04055 Radical SAM superfamily K9N54_05795 PF06968 Biotin and Thiamin Synthesis associated domain K9N54_05800 PF00155 Aminotransferase class I and II K9N54_05805 PF08241 Methyltransferase domain K9N54_05820 PF01435 Peptidase family M48 K9N54_05830 PF00106 short chain dehydrogenase K9N54_05865 PF08328 Adenylosuccinate lyase C-terminal K9N54_05865 PF00206 Lyase K9N54_05870 PF04356 Protein of unknown function (DUF489) K9N54_05885 PF00294 pfkB family carbohydrate kinase K9N54_05890 PF00816 H-NS histone family K9N54_05895 PF03553 Na+/H+ antiporter family K9N54_05905 PF00158 Sigma-54 interaction domain K9N54_05905 PF00072 Response regulator receiver domain K9N54_05905 PF02954 Bacterial regulatory protein, Fis family K9N54_05910 PF01634 ATP phosphoribosyltransferase K9N54_05910 PF08029 HisG, C-terminal domain K9N54_05915 PF00815 Histidinol dehydrogenase K9N54_05920 PF00155 Aminotransferase class I and II K9N54_05925 PF00475 Imidazoleglycerol-phosphate dehydratase K9N54_05925 PF08645 Polynucleotide kinase 3 phosphatase K9N54_05930 PF00117 Glutamine amidotransferase class-I K9N54_05935 PF00977 Histidine biosynthesis protein K9N54_05940 PF00977 Histidine biosynthesis protein K9N54_05945 PF01502 Phosphoribosyl-AMP cyclohydrolase K9N54_05945 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K9N54_05950 PF02810 SEC-C motif K9N54_05955 PF00563 EAL domain K9N54_05955 PF08668 HDOD domain K9N54_05960 PF00149 Calcineurin-like phosphoesterase K9N54_05965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K9N54_05970 PF09190 DALR domain K9N54_05970 PF01406 tRNA synthetases class I (C) catalytic domain K9N54_05975 PF00265 Thymidine kinase K9N54_05980 PF02698 DUF218 domain K9N54_06005 PF01226 Formate/nitrite transporter K9N54_06015 PF03649 Uncharacterised protein family (UPF0014) K9N54_06020 PF06796 Periplasmic nitrate reductase protein NapE K9N54_06025 PF03264 NapC/NirT cytochrome c family, N-terminal region K9N54_06030 PF00384 Molybdopterin oxidoreductase K9N54_06030 PF18364 Molybdopterin oxidoreductase N-terminal domain K9N54_06030 PF01568 Molydopterin dinucleotide binding domain K9N54_06035 PF16874 Glycosyl hydrolase family 36 C-terminal domain K9N54_06035 PF16875 Glycosyl hydrolase family 36 N-terminal domain K9N54_06045 PF01368 DHH family K9N54_06045 PF02833 DHHA2 domain K9N54_06055 PF00005 ABC transporter K9N54_06060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_06060 PF00005 ABC transporter K9N54_06065 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06065 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_06070 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_06080 PF02954 Bacterial regulatory protein, Fis family K9N54_06080 PF00158 Sigma-54 interaction domain K9N54_06085 PF04012 PspA/IM30 family K9N54_06090 PF06667 Phage shock protein B K9N54_06095 PF04024 PspC domain K9N54_06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_06105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_06110 PF00873 AcrB/AcrD/AcrF family K9N54_06115 PF03352 Methyladenine glycosylase K9N54_06120 PF03280 Proteobacterial lipase chaperone protein K9N54_06125 PF00561 alpha/beta hydrolase fold K9N54_06130 PF01053 Cys/Met metabolism PLP-dependent enzyme K9N54_06135 PF13091 PLD-like domain K9N54_06135 PF13396 Phospholipase_D-nuclease N-terminal K9N54_06140 PF00209 Sodium:neurotransmitter symporter family K9N54_06145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_06145 PF00672 HAMP domain K9N54_06145 PF12729 Four helix bundle sensory module for signal transduction K9N54_06150 PF00849 RNA pseudouridylate synthase K9N54_06160 PF00970 Oxidoreductase FAD-binding domain K9N54_06160 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_06160 PF00175 Oxidoreductase NAD-binding domain K9N54_06165 PF03063 Prismane/CO dehydrogenase family K9N54_06170 PF01590 GAF domain K9N54_06170 PF00158 Sigma-54 interaction domain K9N54_06180 PF01066 CDP-alcohol phosphatidyltransferase K9N54_06185 PF00005 ABC transporter K9N54_06190 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06195 PF13416 Bacterial extracellular solute-binding protein K9N54_06200 PF09335 SNARE associated Golgi protein K9N54_06210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K9N54_06210 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_06220 PF00512 His Kinase A (phospho-acceptor) domain K9N54_06225 PF00196 Bacterial regulatory proteins, luxR family K9N54_06225 PF00072 Response regulator receiver domain K9N54_06235 PF06945 Protein of unknown function (DUF1289) K9N54_06245 PF02872 5'-nucleotidase, C-terminal domain K9N54_06245 PF00149 Calcineurin-like phosphoesterase K9N54_06260 PF01386 Ribosomal L25p family K9N54_06265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_06270 PF00072 Response regulator receiver domain K9N54_06270 PF00486 Transcriptional regulatory protein, C terminal K9N54_06280 PF00271 Helicase conserved C-terminal domain K9N54_06280 PF04851 Type III restriction enzyme, res subunit K9N54_06285 PF00849 RNA pseudouridylate synthase K9N54_06285 PF01479 S4 domain K9N54_06290 PF07690 Major Facilitator Superfamily K9N54_06305 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) K9N54_06320 PF03264 NapC/NirT cytochrome c family, N-terminal region K9N54_06325 PF13460 NAD(P)H-binding K9N54_06325 PF11066 Protein of unknown function (DUF2867) K9N54_06330 PF01554 MatE K9N54_06335 PF00005 ABC transporter K9N54_06350 PF06965 Na+/H+ antiporter 1 K9N54_06355 PF16295 Tetracyclin repressor-like, C-terminal domain K9N54_06355 PF00440 Bacterial regulatory proteins, tetR family K9N54_06360 PF09317 Domain of unknown function (DUF1974) K9N54_06360 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_06360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_06360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_06365 PF07055 Enoyl reductase FAD binding domain K9N54_06365 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K9N54_06365 PF12241 Trans-2-enoyl-CoA reductase catalytic region K9N54_06370 PF06826 Predicted Permease Membrane Region K9N54_06370 PF02080 TrkA-C domain K9N54_06375 PF00462 Glutaredoxin K9N54_06380 PF00465 Iron-containing alcohol dehydrogenase K9N54_06385 PF01418 Helix-turn-helix domain, rpiR family K9N54_06385 PF01380 SIS domain K9N54_06390 PF00282 Pyridoxal-dependent decarboxylase conserved domain K9N54_06400 PF03956 Lysine exporter LysO K9N54_06410 PF04994 TfoX C-terminal domain K9N54_06410 PF04993 TfoX N-terminal domain K9N54_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_06425 PF00512 His Kinase A (phospho-acceptor) domain K9N54_06425 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_06435 PF00266 Aminotransferase class-V K9N54_06440 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_06445 PF00664 ABC transporter transmembrane region K9N54_06445 PF00005 ABC transporter K9N54_06450 PF00664 ABC transporter transmembrane region K9N54_06450 PF00005 ABC transporter K9N54_06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_06465 PF00266 Aminotransferase class-V K9N54_06475 PF00990 Diguanylate cyclase, GGDEF domain K9N54_06475 PF00072 Response regulator receiver domain K9N54_06480 PF00939 Sodium:sulfate symporter transmembrane region K9N54_06485 PF02698 DUF218 domain K9N54_06490 PF00390 Malic enzyme, N-terminal domain K9N54_06490 PF03949 Malic enzyme, NAD binding domain K9N54_06495 PF00270 DEAD/DEAH box helicase K9N54_06495 PF04408 Helicase associated domain (HA2) K9N54_06495 PF00271 Helicase conserved C-terminal domain K9N54_06495 PF08482 ATP-dependent helicase C-terminal K9N54_06500 PF02253 Phospholipase A1 K9N54_06510 PF16655 PhoD-like phosphatase, N-terminal domain K9N54_06510 PF09423 PhoD-like phosphatase K9N54_06515 PF01259 SAICAR synthetase K9N54_06535 PF00691 OmpA family K9N54_06535 PF05736 OprF membrane domain K9N54_06550 PF02913 FAD linked oxidases, C-terminal domain K9N54_06550 PF01565 FAD binding domain K9N54_06550 PF13183 4Fe-4S dicluster domain K9N54_06555 PF04191 Phospholipid methyltransferase K9N54_06565 PF00221 Aromatic amino acid lyase K9N54_06570 PF17391 Urocanase N-terminal domain K9N54_06570 PF01175 Urocanase Rossmann-like domain K9N54_06570 PF17392 Urocanase C-terminal domain K9N54_06575 PF00491 Arginase family K9N54_06580 PF01979 Amidohydrolase family K9N54_06585 PF00392 Bacterial regulatory proteins, gntR family K9N54_06585 PF07702 UTRA domain K9N54_06600 PF03129 Anticodon binding domain K9N54_06600 PF02824 TGS domain K9N54_06600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K9N54_06600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K9N54_06605 PF00707 Translation initiation factor IF-3, C-terminal domain K9N54_06605 PF05198 Translation initiation factor IF-3, N-terminal domain K9N54_06610 PF01632 Ribosomal protein L35 K9N54_06615 PF00453 Ribosomal protein L20 K9N54_06620 PF01906 Putative heavy-metal-binding K9N54_06650 PF00990 Diguanylate cyclase, GGDEF domain K9N54_06650 PF17158 Membrane-associated sensor, integral membrane domain K9N54_06655 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K9N54_06655 PF01409 tRNA synthetases class II core domain (F) K9N54_06660 PF03483 B3/4 domain K9N54_06660 PF03147 Ferredoxin-fold anticodon binding domain K9N54_06660 PF01588 Putative tRNA binding domain K9N54_06660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K9N54_06660 PF03484 tRNA synthetase B5 domain K9N54_06670 PF00216 Bacterial DNA-binding protein K9N54_06680 PF05724 Thiopurine S-methyltransferase (TPMT) K9N54_06685 PF02222 ATP-grasp domain K9N54_06690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K9N54_06690 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region K9N54_06695 PF04172 LrgB-like family K9N54_06700 PF03788 LrgA family K9N54_06705 PF00929 Exonuclease K9N54_06705 PF08411 Exonuclease C-terminal K9N54_06710 PF00375 Sodium:dicarboxylate symporter family K9N54_06715 PF13460 NAD(P)H-binding K9N54_06720 PF02277 Phosphoribosyltransferase K9N54_06725 PF02654 Cobalamin-5-phosphate synthase K9N54_06730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K9N54_06735 PF00300 Histidine phosphatase superfamily (branch 1) K9N54_06745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K9N54_06750 PF01032 FecCD transport family K9N54_06755 PF00005 ABC transporter K9N54_06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_06775 PF03466 LysR substrate binding domain K9N54_06785 PF01863 Protein of unknown function DUF45 K9N54_06790 PF05971 RNA methyltransferase K9N54_06810 PF00392 Bacterial regulatory proteins, gntR family K9N54_06815 PF00171 Aldehyde dehydrogenase family K9N54_06820 PF05544 Proline racemase K9N54_06835 PF02423 Ornithine cyclodeaminase/mu-crystallin family K9N54_06840 PF00701 Dihydrodipicolinate synthetase family K9N54_06845 PF00005 ABC transporter K9N54_06845 PF08402 TOBE domain K9N54_06850 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06855 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06865 PF01752 Collagenase K9N54_06865 PF08453 Peptidase family M9 N-terminal K9N54_06875 PF00005 ABC transporter K9N54_06875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_06880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_06880 PF00005 ABC transporter K9N54_06885 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06885 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_06890 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_06895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_06900 PF07687 Peptidase dimerisation domain K9N54_06900 PF01546 Peptidase family M20/M25/M40 K9N54_06910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_06915 PF04209 homogentisate 1,2-dioxygenase K9N54_06925 PF14497 Glutathione S-transferase, C-terminal domain K9N54_06925 PF02798 Glutathione S-transferase, N-terminal domain K9N54_06970 PF13533 Biotin-lipoyl like K9N54_06985 PF08543 Phosphomethylpyrimidine kinase K9N54_06990 PF03466 LysR substrate binding domain K9N54_06990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_07010 PF00300 Histidine phosphatase superfamily (branch 1) K9N54_07025 PF00939 Sodium:sulfate symporter transmembrane region K9N54_07030 PF00512 His Kinase A (phospho-acceptor) domain K9N54_07030 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_07040 PF03707 Bacterial signalling protein N terminal repeat K9N54_07040 PF00563 EAL domain K9N54_07040 PF00990 Diguanylate cyclase, GGDEF domain K9N54_07045 PF11871 Domain of unknown function (DUF3391) K9N54_07045 PF01966 HD domain K9N54_07050 PF01810 LysE type translocator K9N54_07055 PF11230 Protein of unknown function (DUF3029) K9N54_07060 PF04055 Radical SAM superfamily K9N54_07070 PF03741 Integral membrane protein TerC family K9N54_07075 PF01476 LysM domain K9N54_07075 PF08525 Opacity-associated protein A N-terminal motif K9N54_07075 PF01551 Peptidase family M23 K9N54_07095 PF00691 OmpA family K9N54_07100 PF00072 Response regulator receiver domain K9N54_07100 PF02954 Bacterial regulatory protein, Fis family K9N54_07100 PF00158 Sigma-54 interaction domain K9N54_07105 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_07105 PF07724 AAA domain (Cdc48 subfamily) K9N54_07105 PF17871 AAA lid domain K9N54_07105 PF10431 C-terminal, D2-small domain, of ClpB protein K9N54_07110 PF05638 Type VI secretion system effector, Hcp K9N54_07115 PF04717 Type VI secretion system, phage-baseplate injector K9N54_07140 PF00069 Protein kinase domain K9N54_07155 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K9N54_07165 PF05947 Type VI secretion system, TssF K9N54_07175 PF01037 Lrp/AsnC ligand binding domain K9N54_07205 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K9N54_07255 PF01966 HD domain K9N54_07260 PF00465 Iron-containing alcohol dehydrogenase K9N54_07265 PF03222 Tryptophan/tyrosine permease family K9N54_07285 PF00664 ABC transporter transmembrane region K9N54_07285 PF00005 ABC transporter K9N54_07290 PF00664 ABC transporter transmembrane region K9N54_07290 PF00005 ABC transporter K9N54_07315 PF00012 Hsp70 protein K9N54_07320 PF00012 Hsp70 protein K9N54_07330 PF17151 Periplasmic sensor domain K9N54_07330 PF00990 Diguanylate cyclase, GGDEF domain K9N54_07360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_07360 PF00384 Molybdopterin oxidoreductase K9N54_07360 PF01568 Molydopterin dinucleotide binding domain K9N54_07365 PF13247 4Fe-4S dicluster domain K9N54_07365 PF12800 4Fe-4S binding domain K9N54_07370 PF04976 DMSO reductase anchor subunit (DmsC) K9N54_07375 PF02613 Nitrate reductase delta subunit K9N54_07385 PF02525 Flavodoxin-like fold K9N54_07390 PF00270 DEAD/DEAH box helicase K9N54_07390 PF11898 Domain of unknown function (DUF3418) K9N54_07390 PF04408 Helicase associated domain (HA2) K9N54_07390 PF00271 Helicase conserved C-terminal domain K9N54_07390 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K9N54_07405 PF02028 BCCT, betaine/carnitine/choline family transporter K9N54_07415 PF02397 Bacterial sugar transferase K9N54_07420 PF00535 Glycosyl transferase family 2 K9N54_07425 PF13439 Glycosyltransferase Family 4 K9N54_07425 PF00534 Glycosyl transferases group 1 K9N54_07455 PF13439 Glycosyltransferase Family 4 K9N54_07455 PF00534 Glycosyl transferases group 1 K9N54_07465 PF02954 Bacterial regulatory protein, Fis family K9N54_07465 PF00072 Response regulator receiver domain K9N54_07465 PF00158 Sigma-54 interaction domain K9N54_07480 PF02563 Polysaccharide biosynthesis/export protein K9N54_07480 PF10531 SLBB domain K9N54_07490 PF01740 STAS domain K9N54_07495 PF01068 ATP dependent DNA ligase domain K9N54_07495 PF14743 DNA ligase OB-like domain K9N54_07505 PF01554 MatE K9N54_07510 PF00677 Lumazine binding domain K9N54_07520 PF03881 Fructosamine kinase K9N54_07525 PF01339 CheB methylesterase K9N54_07525 PF00072 Response regulator receiver domain K9N54_07530 PF00990 Diguanylate cyclase, GGDEF domain K9N54_07530 PF05230 MASE2 domain K9N54_07540 PF00877 NlpC/P60 family K9N54_07545 PF08447 PAS fold K9N54_07545 PF13426 PAS domain K9N54_07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_07580 PF03942 DTW domain K9N54_07585 PF00480 ROK family K9N54_07595 PF03453 MoeA N-terminal region (domain I and II) K9N54_07595 PF03454 MoeA C-terminal region (domain IV) K9N54_07595 PF00994 Probable molybdopterin binding domain K9N54_07600 PF12804 MobA-like NTP transferase domain K9N54_07605 PF00005 ABC transporter K9N54_07605 PF08402 TOBE domain K9N54_07610 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_07615 PF12849 PBP superfamily domain K9N54_07620 PF02954 Bacterial regulatory protein, Fis family K9N54_07620 PF00072 Response regulator receiver domain K9N54_07620 PF00158 Sigma-54 interaction domain K9N54_07625 PF00512 His Kinase A (phospho-acceptor) domain K9N54_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_07630 PF00005 ABC transporter K9N54_07630 PF12848 ABC transporter K9N54_07635 PF02634 FdhD/NarQ family K9N54_07655 PF02613 Nitrate reductase delta subunit K9N54_07665 PF01568 Molydopterin dinucleotide binding domain K9N54_07665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_07665 PF00384 Molybdopterin oxidoreductase K9N54_07670 PF13247 4Fe-4S dicluster domain K9N54_07685 PF03527 RHS protein K9N54_07685 PF05593 RHS Repeat K9N54_07695 PF00909 Ammonium Transporter Family K9N54_07705 PF02146 Sir2 family K9N54_07710 PF13416 Bacterial extracellular solute-binding protein K9N54_07715 PF13416 Bacterial extracellular solute-binding protein K9N54_07720 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_07725 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_07730 PF00005 ABC transporter K9N54_07730 PF08402 TOBE domain K9N54_07750 PF01171 PP-loop family K9N54_07755 PF00582 Universal stress protein family K9N54_07760 PF00027 Cyclic nucleotide-binding domain K9N54_07760 PF13545 Crp-like helix-turn-helix domain K9N54_07775 PF00403 Heavy-metal-associated domain K9N54_07785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K9N54_07785 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K9N54_07800 PF00115 Cytochrome C and Quinol oxidase polypeptide I K9N54_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_07815 PF00512 His Kinase A (phospho-acceptor) domain K9N54_07815 PF09308 LuxQ, periplasmic K9N54_07815 PF00072 Response regulator receiver domain K9N54_07830 PF17414 MatP C-terminal ribbon-helix-helix domain K9N54_07830 PF06303 MatP N-terminal domain K9N54_07835 PF05362 Lon protease (S16) C-terminal proteolytic domain K9N54_07835 PF13654 AAA domain K9N54_07840 PF07977 FabA-like domain K9N54_07845 PF04957 Ribosome modulation factor K9N54_07855 PF12848 ABC transporter K9N54_07855 PF16326 ABC transporter C-terminal domain K9N54_07855 PF00005 ABC transporter K9N54_07865 PF01170 Putative RNA methylase family UPF0020 K9N54_07865 PF10672 S-adenosylmethionine-dependent methyltransferase K9N54_07865 PF02926 THUMP domain K9N54_07870 PF07126 Cell-division protein ZapC K9N54_07875 PF01180 Dihydroorotate dehydrogenase K9N54_07880 PF05088 Bacterial NAD-glutamate dehydrogenase K9N54_07890 PF11940 Domain of unknown function (DUF3458) Ig-like fold K9N54_07890 PF17432 Domain of unknown function (DUF3458_C) ARM repeats K9N54_07890 PF01433 Peptidase family M1 domain K9N54_07900 PF03572 Peptidase family S41 K9N54_07900 PF00595 PDZ domain K9N54_07900 PF11818 C-terminal domain of tail specific protease (DUF3340) K9N54_07900 PF17804 Tail specific protease N-terminal domain K9N54_07905 PF04352 ProQ/FINO family K9N54_07905 PF17516 ProQ C-terminal domain K9N54_07910 PF13185 GAF domain K9N54_07915 PF00664 ABC transporter transmembrane region K9N54_07915 PF00005 ABC transporter K9N54_07920 PF04403 Paraquat-inducible protein A K9N54_07925 PF02470 MlaD protein K9N54_07930 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K9N54_07930 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF K9N54_07930 PF01189 16S rRNA methyltransferase RsmB/F K9N54_07950 PF00793 DAHP synthetase I family K9N54_07955 PF04461 Protein of unknown function (DUF520) K9N54_07960 PF10414 Sirohaem synthase dimerisation region K9N54_07960 PF14824 Sirohaem biosynthesis protein central K9N54_07960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K9N54_07965 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_07970 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_07975 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_07980 PF00005 ABC transporter K9N54_07985 PF01027 Inhibitor of apoptosis-promoting Bax1 K9N54_07995 PF04358 DsrC like protein K9N54_08000 PF00708 Acylphosphatase K9N54_08005 PF02743 Cache domain K9N54_08005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_08005 PF00672 HAMP domain K9N54_08010 PF10672 S-adenosylmethionine-dependent methyltransferase K9N54_08010 PF17785 PUA-like domain K9N54_08025 PF00691 OmpA family K9N54_08025 PF05736 OprF membrane domain K9N54_08040 PF05736 OprF membrane domain K9N54_08040 PF00691 OmpA family K9N54_08050 PF00990 Diguanylate cyclase, GGDEF domain K9N54_08050 PF17158 Membrane-associated sensor, integral membrane domain K9N54_08055 PF06508 Queuosine biosynthesis protein QueC K9N54_08060 PF04055 Radical SAM superfamily K9N54_08075 PF00089 Trypsin K9N54_08085 PF16177 Acetyl-coenzyme A synthetase N-terminus K9N54_08085 PF00501 AMP-binding enzyme K9N54_08085 PF13193 AMP-binding enzyme C-terminal domain K9N54_08090 PF04303 PrpF protein K9N54_08095 PF00330 Aconitase family (aconitate hydratase) K9N54_08095 PF00694 Aconitase C-terminal domain K9N54_08100 PF00285 Citrate synthase, C-terminal domain K9N54_08130 PF01970 Tripartite tricarboxylate transporter TctA family K9N54_08135 PF01925 Sulfite exporter TauE/SafE K9N54_08145 PF05844 YopD protein K9N54_08155 PF07720 Tetratricopeptide repeat K9N54_08160 PF04792 V antigen (LcrV) protein K9N54_08165 PF07216 LcrG protein K9N54_08170 PF09621 Type III secretion system regulator (LcrR) K9N54_08175 PF00771 FHIPEP family K9N54_08195 PF09059 TyeA K9N54_08200 PF07201 HrpJ-like domain K9N54_08205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_08205 PF02874 ATP synthase alpha/beta family, beta-barrel domain K9N54_08205 PF18269 T3SS EscN ATPase C-terminal domain K9N54_08220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K9N54_08225 PF00813 FliP family K9N54_08230 PF01313 Bacterial export proteins, family 3 K9N54_08235 PF01311 Bacterial export proteins, family 1 K9N54_08240 PF01312 FlhB HrpN YscU SpaS Family K9N54_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_08245 PF03466 LysR substrate binding domain K9N54_08250 PF12146 Serine aminopeptidase, S33 K9N54_08255 PF12146 Serine aminopeptidase, S33 K9N54_08310 PF01555 DNA methylase K9N54_08470 PF02810 SEC-C motif K9N54_08535 PF13693 Winged helix-turn-helix DNA-binding K9N54_08555 PF02108 Flagellar assembly protein FliH K9N54_08565 PF01514 Secretory protein of YscJ/FliF family K9N54_08570 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI K9N54_08580 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) K9N54_08585 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF K9N54_08595 PF16697 Inner membrane component of T3SS, cytoplasmic domain K9N54_08595 PF16693 Inner membrane component of T3SS, periplasmic domain K9N54_08600 PF03958 Bacterial type II/III secretion system short domain K9N54_08600 PF00263 Bacterial type II and III secretion system protein K9N54_08615 PF12833 Helix-turn-helix domain K9N54_08635 PF00171 Aldehyde dehydrogenase family K9N54_08640 PF01590 GAF domain K9N54_08640 PF02954 Bacterial regulatory protein, Fis family K9N54_08640 PF00158 Sigma-54 interaction domain K9N54_08670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K9N54_08670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K9N54_08675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K9N54_08680 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K9N54_08680 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K9N54_08880 PF17288 Terminase RNAseH like domain K9N54_08880 PF04466 Phage terminase large subunit K9N54_08895 PF01380 SIS domain K9N54_08915 PF02195 ParB-like nuclease domain K9N54_08995 PF01381 Helix-turn-helix K9N54_08995 PF00717 Peptidase S24-like K9N54_09050 PF00072 Response regulator receiver domain K9N54_09050 PF12431 Transcriptional regulator K9N54_09055 PF00989 PAS fold K9N54_09055 PF17203 Single cache domain 3 K9N54_09055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K9N54_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_09070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_09085 PF00034 Cytochrome c K9N54_09085 PF03150 Di-haem cytochrome c peroxidase K9N54_09090 PF00696 Amino acid kinase family K9N54_09090 PF13840 ACT domain K9N54_09095 PF06339 Ectoine synthase K9N54_09100 PF00202 Aminotransferase class-III K9N54_09105 PF00583 Acetyltransferase (GNAT) family K9N54_09110 PF02028 BCCT, betaine/carnitine/choline family transporter K9N54_09125 PF00005 ABC transporter K9N54_09125 PF00571 CBS domain K9N54_09130 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_09135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K9N54_09145 PF00501 AMP-binding enzyme K9N54_09165 PF00486 Transcriptional regulatory protein, C terminal K9N54_09165 PF00072 Response regulator receiver domain K9N54_09170 PF08521 Two-component sensor kinase N-terminal K9N54_09170 PF00512 His Kinase A (phospho-acceptor) domain K9N54_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_09175 PF00884 Sulfatase K9N54_09200 PF01235 Sodium:alanine symporter family K9N54_09210 PF01810 LysE type translocator K9N54_09215 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K9N54_09220 PF03279 Bacterial lipid A biosynthesis acyltransferase K9N54_09225 PF13520 Amino acid permease K9N54_09235 PF04204 Homoserine O-succinyltransferase K9N54_09250 PF00990 Diguanylate cyclase, GGDEF domain K9N54_09250 PF00563 EAL domain K9N54_09250 PF03707 Bacterial signalling protein N terminal repeat K9N54_09255 PF00672 HAMP domain K9N54_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_09255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K9N54_09255 PF00072 Response regulator receiver domain K9N54_09255 PF01627 Hpt domain K9N54_09255 PF00512 His Kinase A (phospho-acceptor) domain K9N54_09270 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_09270 PF12464 Maltose acetyltransferase K9N54_09280 PF01928 CYTH domain K9N54_09290 PF04237 YjbR K9N54_09295 PF01047 MarR family K9N54_09305 PF12833 Helix-turn-helix domain K9N54_09310 PF01411 tRNA synthetases class II (A) K9N54_09310 PF02272 DHHA1 domain K9N54_09310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K9N54_09320 PF00563 EAL domain K9N54_09320 PF00196 Bacterial regulatory proteins, luxR family K9N54_09325 PF02833 DHHA2 domain K9N54_09325 PF01368 DHH family K9N54_09330 PF00202 Aminotransferase class-III K9N54_09335 PF00171 Aldehyde dehydrogenase family K9N54_09340 PF04371 Porphyromonas-type peptidyl-arginine deiminase K9N54_09345 PF00795 Carbon-nitrogen hydrolase K9N54_09350 PF01266 FAD dependent oxidoreductase K9N54_09355 PF00171 Aldehyde dehydrogenase family K9N54_09360 PF07883 Cupin domain K9N54_09360 PF01381 Helix-turn-helix K9N54_09365 PF07722 Peptidase C26 K9N54_09370 PF00120 Glutamine synthetase, catalytic domain K9N54_09375 PF03553 Na+/H+ antiporter family K9N54_09415 PF13333 Integrase core domain K9N54_09415 PF13276 HTH-like domain K9N54_09415 PF00665 Integrase core domain K9N54_09660 PF01810 LysE type translocator K9N54_09795 PF13737 Transposase DDE domain K9N54_09855 PF13614 AAA domain K9N54_09920 PF00533 BRCA1 C Terminus (BRCT) domain K9N54_09920 PF01653 NAD-dependent DNA ligase adenylation domain K9N54_09920 PF03120 NAD-dependent DNA ligase OB-fold domain K9N54_09920 PF12826 Helix-hairpin-helix motif K9N54_09925 PF11008 Protein of unknown function (DUF2846) K9N54_09945 PF00583 Acetyltransferase (GNAT) family K9N54_09950 PF00857 Isochorismatase family K9N54_10135 PF01042 Endoribonuclease L-PSP K9N54_10330 PF01337 Barstar (barnase inhibitor) K9N54_10420 PF01042 Endoribonuclease L-PSP K9N54_10505 PF13495 Phage integrase, N-terminal SAM-like domain K9N54_10505 PF00589 Phage integrase family K9N54_10520 PF13302 Acetyltransferase (GNAT) domain K9N54_10525 PF18024 Helix-turn-helix domain K9N54_10525 PF00158 Sigma-54 interaction domain K9N54_10530 PF05128 Domain of unknown function (DUF697) K9N54_10535 PF04317 YcjX-like family, DUF463 K9N54_10550 PF04715 Anthranilate synthase component I, N terminal region K9N54_10550 PF00425 chorismate binding enzyme K9N54_10555 PF00072 Response regulator receiver domain K9N54_10555 PF09308 LuxQ, periplasmic K9N54_10555 PF00512 His Kinase A (phospho-acceptor) domain K9N54_10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_10565 PF00293 NUDIX domain K9N54_10570 PF03222 Tryptophan/tyrosine permease family K9N54_10575 PF03313 Serine dehydratase alpha chain K9N54_10575 PF03315 Serine dehydratase beta chain K9N54_10580 PF04940 Sensors of blue-light using FAD K9N54_10580 PF00563 EAL domain K9N54_10590 PF01242 6-pyruvoyl tetrahydropterin synthase K9N54_10595 PF00672 HAMP domain K9N54_10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_10595 PF12729 Four helix bundle sensory module for signal transduction K9N54_10600 PF01336 OB-fold nucleic acid binding domain K9N54_10600 PF00152 tRNA synthetases class II (D, K and N) K9N54_10610 PF00392 Bacterial regulatory proteins, gntR family K9N54_10610 PF00155 Aminotransferase class I and II K9N54_10625 PF00155 Aminotransferase class I and II K9N54_10645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_10645 PF00672 HAMP domain K9N54_10650 PF02028 BCCT, betaine/carnitine/choline family transporter K9N54_10655 PF01047 MarR family K9N54_10660 PF00072 Response regulator receiver domain K9N54_10660 PF00196 Bacterial regulatory proteins, luxR family K9N54_10665 PF17200 Single Cache domain 2 K9N54_10665 PF07730 Histidine kinase K9N54_10670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K9N54_10680 PF03480 Bacterial extracellular solute-binding protein, family 7 K9N54_10695 PF00753 Metallo-beta-lactamase superfamily K9N54_10700 PF05951 Bacterial protein of unknown function (DUF882) K9N54_10705 PF01471 Putative peptidoglycan binding domain K9N54_10705 PF03734 L,D-transpeptidase catalytic domain K9N54_10730 PF00925 GTP cyclohydrolase II K9N54_10740 PF03918 Cytochrome C biogenesis protein K9N54_10745 PF08534 Redoxin K9N54_10750 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K9N54_10750 PF01578 Cytochrome C assembly protein K9N54_10755 PF03916 Polysulphide reductase, NrfD K9N54_10760 PF13247 4Fe-4S dicluster domain K9N54_10770 PF02335 Cytochrome c552 K9N54_10785 PF03989 DNA gyrase C-terminal domain, beta-propeller K9N54_10785 PF00521 DNA gyrase/topoisomerase IV, subunit A K9N54_10795 PF00317 Ribonucleotide reductase, all-alpha domain K9N54_10795 PF03477 ATP cone domain K9N54_10795 PF02867 Ribonucleotide reductase, barrel domain K9N54_10800 PF00268 Ribonucleotide reductase, small chain K9N54_10810 PF00994 Probable molybdopterin binding domain K9N54_10825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K9N54_10830 PF16653 Saccharopine dehydrogenase C-terminal domain K9N54_10830 PF03435 Saccharopine dehydrogenase NADP binding domain K9N54_10835 PF00202 Aminotransferase class-III K9N54_10860 PF01066 CDP-alcohol phosphatidyltransferase K9N54_10865 PF08459 UvrC Helix-hairpin-helix N-terminal K9N54_10865 PF01541 GIY-YIG catalytic domain K9N54_10865 PF02151 UvrB/uvrC motif K9N54_10870 PF00072 Response regulator receiver domain K9N54_10870 PF00196 Bacterial regulatory proteins, luxR family K9N54_10875 PF00136 DNA polymerase family B K9N54_10875 PF03104 DNA polymerase family B, exonuclease domain K9N54_10885 PF08207 Elongation factor P (EF-P) KOW-like domain K9N54_10885 PF09285 Elongation factor P, C-terminal K9N54_10885 PF01132 Elongation factor P (EF-P) OB domain K9N54_10890 PF04269 Protein of unknown function, DUF440 K9N54_10895 PF00849 RNA pseudouridylate synthase K9N54_10895 PF01479 S4 domain K9N54_10905 PF01300 Telomere recombination K9N54_10910 PF02811 PHP domain K9N54_10915 PF08056 Tryptophan operon leader peptide K9N54_10920 PF04715 Anthranilate synthase component I, N terminal region K9N54_10920 PF00425 chorismate binding enzyme K9N54_10925 PF00117 Glutamine amidotransferase class-I K9N54_10930 PF00591 Glycosyl transferase family, a/b domain K9N54_10930 PF02885 Glycosyl transferase family, helical bundle domain K9N54_10935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K9N54_10935 PF00218 Indole-3-glycerol phosphate synthase K9N54_10940 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_10945 PF00290 Tryptophan synthase alpha chain K9N54_10950 PF00027 Cyclic nucleotide-binding domain K9N54_10950 PF13545 Crp-like helix-turn-helix domain K9N54_10955 PF13193 AMP-binding enzyme C-terminal domain K9N54_10955 PF00501 AMP-binding enzyme K9N54_10960 PF00375 Sodium:dicarboxylate symporter family K9N54_10965 PF17327 Acyl homoserine lactone synthase K9N54_10970 PF00072 Response regulator receiver domain K9N54_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_10980 PF04279 Intracellular septation protein A K9N54_10985 PF03061 Thioesterase superfamily K9N54_10990 PF03795 YCII-related domain K9N54_11000 PF01717 Cobalamin-independent synthase, Catalytic domain K9N54_11000 PF08267 Cobalamin-independent synthase, N-terminal domain K9N54_11005 PF03466 LysR substrate binding domain K9N54_11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_11020 PF00360 Phytochrome region K9N54_11020 PF00990 Diguanylate cyclase, GGDEF domain K9N54_11020 PF01590 GAF domain K9N54_11020 PF00563 EAL domain K9N54_11025 PF08497 Radical SAM N-terminal K9N54_11025 PF04055 Radical SAM superfamily K9N54_11025 PF11842 Domain of unknown function (DUF3362) K9N54_11030 PF00672 HAMP domain K9N54_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_11035 PF00486 Transcriptional regulatory protein, C terminal K9N54_11035 PF00072 Response regulator receiver domain K9N54_11040 PF00672 HAMP domain K9N54_11040 PF00512 His Kinase A (phospho-acceptor) domain K9N54_11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_11060 PF03466 LysR substrate binding domain K9N54_11065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_11065 PF00529 HlyD membrane-fusion protein of T1SS K9N54_11075 PF08267 Cobalamin-independent synthase, N-terminal domain K9N54_11075 PF01717 Cobalamin-independent synthase, Catalytic domain K9N54_11085 PF12833 Helix-turn-helix domain K9N54_11085 PF02311 AraC-like ligand binding domain K9N54_11090 PF00857 Isochorismatase family K9N54_11095 PF12704 MacB-like periplasmic core domain K9N54_11095 PF02687 FtsX-like permease family K9N54_11095 PF00005 ABC transporter K9N54_11100 PF12704 MacB-like periplasmic core domain K9N54_11100 PF02687 FtsX-like permease family K9N54_11100 PF00005 ABC transporter K9N54_11105 PF02687 FtsX-like permease family K9N54_11105 PF12704 MacB-like periplasmic core domain K9N54_11105 PF00005 ABC transporter K9N54_11115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_11130 PF01938 TRAM domain K9N54_11130 PF05958 tRNA (Uracil-5-)-methyltransferase K9N54_11145 PF00085 Thioredoxin K9N54_11150 PF11412 Disulphide bond corrector protein DsbC K9N54_11150 PF02683 Cytochrome C biogenesis protein transmembrane region K9N54_11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_11160 PF03466 LysR substrate binding domain K9N54_11165 PF00196 Bacterial regulatory proteins, luxR family K9N54_11165 PF00072 Response regulator receiver domain K9N54_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_11170 PF00512 His Kinase A (phospho-acceptor) domain K9N54_11175 PF13247 4Fe-4S dicluster domain K9N54_11180 PF03916 Polysulphide reductase, NrfD K9N54_11185 PF00384 Molybdopterin oxidoreductase K9N54_11185 PF01568 Molydopterin dinucleotide binding domain K9N54_11185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_11190 PF00034 Cytochrome c K9N54_11195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K9N54_11200 PF04403 Paraquat-inducible protein A K9N54_11205 PF02470 MlaD protein K9N54_11215 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase K9N54_11225 PF00535 Glycosyl transferase family 2 K9N54_11230 PF01370 NAD dependent epimerase/dehydratase family K9N54_11240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_11245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K9N54_11250 PF18073 Rubredoxin metal binding domain K9N54_11255 PF06305 Lipopolysaccharide assembly protein A domain K9N54_11260 PF00216 Bacterial DNA-binding protein K9N54_11265 PF00575 S1 RNA binding domain K9N54_11270 PF02224 Cytidylate kinase K9N54_11275 PF01343 Peptidase family S49 K9N54_11275 PF08496 Peptidase family S49 N-terminal K9N54_11280 PF00106 short chain dehydrogenase K9N54_11295 PF02811 PHP domain K9N54_11295 PF07733 Bacterial DNA polymerase III alpha NTPase domain K9N54_11295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K9N54_11295 PF14579 Helix-hairpin-helix motif K9N54_11295 PF01336 OB-fold nucleic acid binding domain K9N54_11300 PF00072 Response regulator receiver domain K9N54_11300 PF01584 CheW-like domain K9N54_11305 PF00480 ROK family K9N54_11310 PF00224 Pyruvate kinase, barrel domain K9N54_11310 PF02887 Pyruvate kinase, alpha/beta domain K9N54_11315 PF01734 Patatin-like phospholipase K9N54_11330 PF00209 Sodium:neurotransmitter symporter family K9N54_11345 PF00367 phosphotransferase system, EIIB K9N54_11345 PF02378 Phosphotransferase system, EIIC K9N54_11350 PF01026 TatD related DNase K9N54_11355 PF09115 DNA polymerase III, delta subunit, C terminal K9N54_11360 PF02223 Thymidylate kinase K9N54_11365 PF02618 YceG-like family K9N54_11370 PF01063 Amino-transferase class IV K9N54_11375 PF00109 Beta-ketoacyl synthase, N-terminal domain K9N54_11375 PF02801 Beta-ketoacyl synthase, C-terminal domain K9N54_11380 PF00550 Phosphopantetheine attachment site K9N54_11390 PF00698 Acyl transferase domain K9N54_11395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K9N54_11395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K9N54_11400 PF02504 Fatty acid synthesis protein K9N54_11405 PF01783 Ribosomal L32p protein family K9N54_11410 PF02620 Large ribosomal RNA subunit accumulation protein YceD K9N54_11415 PF02545 Maf-like protein K9N54_11420 PF00849 RNA pseudouridylate synthase K9N54_11420 PF01479 S4 domain K9N54_11425 PF10150 Ribonuclease E/G family K9N54_11425 PF12111 Polyribonucleotide phosphorylase C terminal K9N54_11425 PF00575 S1 RNA binding domain K9N54_11430 PF00916 Sulfate permease family K9N54_11430 PF01740 STAS domain K9N54_11435 PF01451 Low molecular weight phosphotyrosine protein phosphatase K9N54_11440 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K9N54_11440 PF12557 Cob(I)alamin adenosyltransferase N terminal K9N54_11450 PF00485 Phosphoribulokinase / Uridine kinase family K9N54_11455 PF10609 NUBPL iron-transfer P-loop NTPase K9N54_11460 PF01588 Putative tRNA binding domain K9N54_11460 PF09334 tRNA synthetases class I (M) K9N54_11470 PF00392 Bacterial regulatory proteins, gntR family K9N54_11470 PF07840 FadR C-terminal domain K9N54_11475 PF06450 Bacterial Na+/H+ antiporter B (NhaB) K9N54_11480 PF02600 Disulfide bond formation protein DsbB K9N54_11485 PF02810 SEC-C motif K9N54_11485 PF03695 Uncharacterised protein family (UPF0149) K9N54_11490 PF01207 Dihydrouridine synthase (Dus) K9N54_11495 PF00072 Response regulator receiver domain K9N54_11495 PF00990 Diguanylate cyclase, GGDEF domain K9N54_11500 PF00128 Alpha amylase, catalytic domain K9N54_11500 PF02903 Alpha amylase, N-terminal ig-like domain K9N54_11505 PF00005 ABC transporter K9N54_11510 PF02653 Branched-chain amino acid transport system / permease component K9N54_11520 PF04217 Protein of unknown function, DUF412 K9N54_11525 PF00871 Acetokinase family K9N54_11530 PF07085 DRTGG domain K9N54_11530 PF01515 Phosphate acetyl/butaryl transferase K9N54_11535 PF13194 Domain of unknown function (DUF4010) K9N54_11545 PF13409 Glutathione S-transferase, N-terminal domain K9N54_11550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_11550 PF00005 ABC transporter K9N54_11555 PF00005 ABC transporter K9N54_11555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_11560 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_11560 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_11565 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_11570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_11575 PF02391 MoaE protein K9N54_11580 PF02597 ThiS family K9N54_11585 PF01967 MoaC family K9N54_11590 PF00994 Probable molybdopterin binding domain K9N54_11595 PF06463 Molybdenum Cofactor Synthesis C K9N54_11595 PF04055 Radical SAM superfamily K9N54_11600 PF01933 Uncharacterised protein family UPF0052 K9N54_11605 PF01627 Hpt domain K9N54_11610 PF00072 Response regulator receiver domain K9N54_11610 PF00158 Sigma-54 interaction domain K9N54_11610 PF02954 Bacterial regulatory protein, Fis family K9N54_11615 PF02151 UvrB/uvrC motif K9N54_11615 PF17757 UvrB interaction domain K9N54_11615 PF04851 Type III restriction enzyme, res subunit K9N54_11615 PF00271 Helicase conserved C-terminal domain K9N54_11615 PF12344 Ultra-violet resistance protein B K9N54_11625 PF02508 Rnf-Nqr subunit, membrane protein K9N54_11630 PF04060 Putative Fe-S cluster K9N54_11635 PF10531 SLBB domain K9N54_11635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K9N54_11635 PF12838 4Fe-4S dicluster domain K9N54_11635 PF13375 RnfC Barrel sandwich hybrid domain K9N54_11640 PF03116 NQR2, RnfD, RnfE family K9N54_11645 PF04205 FMN-binding domain K9N54_11650 PF02508 Rnf-Nqr subunit, membrane protein K9N54_11655 PF00730 HhH-GPD superfamily base excision DNA repair protein K9N54_11655 PF00633 Helix-hairpin-helix motif K9N54_11655 PF10576 Iron-sulfur binding domain of endonuclease III K9N54_11660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_11665 PF10952 Protein of unknown function (DUF2753) K9N54_11670 PF00691 OmpA family K9N54_11670 PF18393 MotY N-terminal domain K9N54_11675 PF00929 Exonuclease K9N54_11680 PF13726 Na+-H+ antiporter family K9N54_11680 PF03553 Na+/H+ antiporter family K9N54_11690 PF00462 Glutaredoxin K9N54_11695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K9N54_11695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K9N54_11710 PF00465 Iron-containing alcohol dehydrogenase K9N54_11710 PF00171 Aldehyde dehydrogenase family K9N54_11715 PF01914 MarC family integral membrane protein K9N54_11720 PF00027 Cyclic nucleotide-binding domain K9N54_11720 PF00520 Ion transport protein K9N54_11725 PF01118 Semialdehyde dehydrogenase, NAD binding domain K9N54_11725 PF02774 Semialdehyde dehydrogenase, dimerisation domain K9N54_11730 PF03553 Na+/H+ antiporter family K9N54_11745 PF04245 37-kD nucleoid-associated bacterial protein K9N54_11750 PF07208 Protein of unknown function (DUF1414) K9N54_11755 PF00884 Sulfatase K9N54_11755 PF11893 Domain of unknown function (DUF3413) K9N54_11765 PF00850 Histone deacetylase domain K9N54_11770 PF00106 short chain dehydrogenase K9N54_11780 PF01751 Toprim domain K9N54_11780 PF01131 DNA topoisomerase K9N54_11785 PF00881 Nitroreductase family K9N54_11790 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_11790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K9N54_11795 PF01343 Peptidase family S49 K9N54_11800 PF00710 Asparaginase, N-terminal K9N54_11800 PF17763 Glutaminase/Asparaginase C-terminal domain K9N54_11805 PF07023 Protein of unknown function (DUF1315) K9N54_11815 PF01641 SelR domain K9N54_11820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K9N54_11820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K9N54_11825 PF01263 Aldose 1-epimerase K9N54_11830 PF00672 HAMP domain K9N54_11830 PF02743 Cache domain K9N54_11830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_11835 PF13847 Methyltransferase domain K9N54_11850 PF00245 Alkaline phosphatase K9N54_11860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_11865 PF03992 Antibiotic biosynthesis monooxygenase K9N54_11870 PF00924 Mechanosensitive ion channel K9N54_11870 PF05552 Conserved TM helix K9N54_11875 PF03692 Putative zinc- or iron-chelating domain K9N54_11880 PF04226 Transglycosylase associated protein K9N54_11885 PF03692 Putative zinc- or iron-chelating domain K9N54_11895 PF03313 Serine dehydratase alpha chain K9N54_11900 PF01042 Endoribonuclease L-PSP K9N54_11910 PF00230 Major intrinsic protein K9N54_11915 PF13662 Toprim domain K9N54_11915 PF02132 RecR protein K9N54_11920 PF02575 YbaB/EbfC DNA-binding family K9N54_11925 PF12170 DNA polymerase III tau subunit V interacting with alpha K9N54_11925 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding K9N54_11925 PF12169 DNA polymerase III subunits gamma and tau domain III K9N54_11930 PF00156 Phosphoribosyl transferase domain K9N54_11935 PF04304 Protein of unknown function (DUF454) K9N54_11940 PF00072 Response regulator receiver domain K9N54_11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_11945 PF03466 LysR substrate binding domain K9N54_11950 PF00156 Phosphoribosyl transferase domain K9N54_11955 PF02674 Colicin V production protein K9N54_11960 PF05036 Sporulation related domain K9N54_11965 PF02875 Mur ligase family, glutamate ligase domain K9N54_11965 PF08245 Mur ligase middle domain K9N54_11970 PF01039 Carboxyl transferase domain K9N54_11970 PF17848 Acetyl-coA carboxylase zinc finger domain K9N54_11975 PF01416 tRNA pseudouridine synthase K9N54_11985 PF02774 Semialdehyde dehydrogenase, dimerisation domain K9N54_11985 PF01118 Semialdehyde dehydrogenase, NAD binding domain K9N54_11990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K9N54_11990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K9N54_11990 PF11890 Domain of unknown function (DUF3410) K9N54_11995 PF00109 Beta-ketoacyl synthase, N-terminal domain K9N54_11995 PF02801 Beta-ketoacyl synthase, C-terminal domain K9N54_12000 PF01266 FAD dependent oxidoreductase K9N54_12000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K9N54_12005 PF03358 NADPH-dependent FMN reductase K9N54_12010 PF08891 YfcL protein K9N54_12015 PF04315 Elongation factor P hydroxylase K9N54_12020 PF03458 UPF0126 domain K9N54_12025 PF01264 Chorismate synthase K9N54_12030 PF05175 Methyltransferase small domain K9N54_12035 PF01713 Smr domain K9N54_12040 PF00300 Histidine phosphatase superfamily (branch 1) K9N54_12045 PF00675 Insulinase (Peptidase family M16) K9N54_12045 PF05193 Peptidase M16 inactive domain K9N54_12045 PF16187 Middle or third domain of peptidase_M16 K9N54_12055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K9N54_12055 PF00378 Enoyl-CoA hydratase/isomerase K9N54_12055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K9N54_12060 PF02803 Thiolase, C-terminal domain K9N54_12060 PF00108 Thiolase, N-terminal domain K9N54_12065 PF04542 Sigma-70 region 2 K9N54_12065 PF08281 Sigma-70, region 4 K9N54_12075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K9N54_12080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K9N54_12085 PF04333 MlaA lipoprotein K9N54_12095 PF03918 Cytochrome C biogenesis protein K9N54_12100 PF08534 Redoxin K9N54_12105 PF01578 Cytochrome C assembly protein K9N54_12105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K9N54_12110 PF03100 CcmE K9N54_12115 PF04995 Heme exporter protein D (CcmD) K9N54_12120 PF01578 Cytochrome C assembly protein K9N54_12125 PF03379 CcmB protein K9N54_12130 PF00005 ABC transporter K9N54_12140 PF01584 CheW-like domain K9N54_12150 PF13614 AAA domain K9N54_12155 PF01339 CheB methylesterase K9N54_12155 PF00072 Response regulator receiver domain K9N54_12160 PF00072 Response regulator receiver domain K9N54_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_12160 PF02895 Signal transducing histidine kinase, homodimeric domain K9N54_12160 PF01584 CheW-like domain K9N54_12160 PF01627 Hpt domain K9N54_12165 PF04344 Chemotaxis phosphatase, CheZ K9N54_12170 PF00072 Response regulator receiver domain K9N54_12175 PF04542 Sigma-70 region 2 K9N54_12175 PF04545 Sigma-70, region 4 K9N54_12175 PF04539 Sigma-70 region 3 K9N54_12180 PF10609 NUBPL iron-transfer P-loop NTPase K9N54_12185 PF00448 SRP54-type protein, GTPase domain K9N54_12190 PF00771 FHIPEP family K9N54_12195 PF01312 FlhB HrpN YscU SpaS Family K9N54_12200 PF01311 Bacterial export proteins, family 1 K9N54_12205 PF01313 Bacterial export proteins, family 3 K9N54_12210 PF00813 FliP family K9N54_12215 PF04347 Flagellar biosynthesis protein, FliO K9N54_12220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K9N54_12225 PF02154 Flagellar motor switch protein FliM K9N54_12225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K9N54_12245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_12245 PF18269 T3SS EscN ATPase C-terminal domain K9N54_12255 PF01706 FliG C-terminal domain K9N54_12255 PF14841 FliG middle domain K9N54_12255 PF14842 FliG N-terminal domain K9N54_12260 PF01514 Secretory protein of YscJ/FliF family K9N54_12260 PF08345 Flagellar M-ring protein C-terminal K9N54_12265 PF02049 Flagellar hook-basal body complex protein FliE K9N54_12270 PF02954 Bacterial regulatory protein, Fis family K9N54_12270 PF00072 Response regulator receiver domain K9N54_12270 PF00158 Sigma-54 interaction domain K9N54_12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_12275 PF00512 His Kinase A (phospho-acceptor) domain K9N54_12275 PF13188 PAS domain K9N54_12280 PF00158 Sigma-54 interaction domain K9N54_12280 PF02954 Bacterial regulatory protein, Fis family K9N54_12280 PF06490 Flagellar regulatory protein FleQ K9N54_12285 PF02561 Flagellar protein FliS K9N54_12295 PF07196 Flagellin hook IN motif K9N54_12295 PF07195 Flagellar hook-associated protein 2 C-terminus K9N54_12295 PF02465 Flagellar hook-associated protein 2 N-terminus K9N54_12300 PF03646 FlaG protein K9N54_12305 PF00669 Bacterial flagellin N-terminal helical region K9N54_12305 PF07196 Flagellin hook IN motif K9N54_12305 PF00700 Bacterial flagellin C-terminal helical region K9N54_12310 PF07196 Flagellin hook IN motif K9N54_12310 PF00669 Bacterial flagellin N-terminal helical region K9N54_12310 PF00700 Bacterial flagellin C-terminal helical region K9N54_12315 PF00700 Bacterial flagellin C-terminal helical region K9N54_12315 PF00669 Bacterial flagellin N-terminal helical region K9N54_12315 PF07196 Flagellin hook IN motif K9N54_12320 PF04261 Dyp-type peroxidase family K9N54_12325 PF11143 Protein of unknown function (DUF2919) K9N54_12345 PF03960 ArsC family K9N54_12350 PF07687 Peptidase dimerisation domain K9N54_12350 PF01546 Peptidase family M20/M25/M40 K9N54_12365 PF06804 NlpB/DapX lipoprotein K9N54_12370 PF00701 Dihydrodipicolinate synthetase family K9N54_12375 PF01842 ACT domain K9N54_12405 PF00578 AhpC/TSA family K9N54_12420 PF01381 Helix-turn-helix K9N54_12455 PF00578 AhpC/TSA family K9N54_12460 PF01594 AI-2E family transporter K9N54_12470 PF01435 Peptidase family M48 K9N54_12470 PF13181 Tetratricopeptide repeat K9N54_12475 PF03960 ArsC family K9N54_12480 PF03358 NADPH-dependent FMN reductase K9N54_12495 PF00860 Permease family K9N54_12505 PF00586 AIR synthase related protein, N-terminal domain K9N54_12505 PF02769 AIR synthase related protein, C-terminal domain K9N54_12510 PF00551 Formyl transferase K9N54_12515 PF13230 Glutamine amidotransferases class-II K9N54_12520 PF13580 SIS domain K9N54_12525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_12525 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_12525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_12525 PF09317 Domain of unknown function (DUF1974) K9N54_12530 PF00916 Sulfate permease family K9N54_12530 PF01740 STAS domain K9N54_12540 PF00929 Exonuclease K9N54_12545 PF00075 RNase H K9N54_12550 PF08241 Methyltransferase domain K9N54_12555 PF16123 Hydroxyacylglutathione hydrolase C-terminus K9N54_12555 PF00753 Metallo-beta-lactamase superfamily K9N54_12560 PF01464 Transglycosylase SLT domain K9N54_12560 PF01476 LysM domain K9N54_12570 PF03372 Endonuclease/Exonuclease/phosphatase family K9N54_12575 PF00543 Nitrogen regulatory protein P-II K9N54_12580 PF00034 Cytochrome c K9N54_12585 PF01171 PP-loop family K9N54_12585 PF09179 TilS substrate binding domain K9N54_12585 PF11734 TilS substrate C-terminal domain K9N54_12590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K9N54_12595 PF07733 Bacterial DNA polymerase III alpha NTPase domain K9N54_12595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K9N54_12595 PF14579 Helix-hairpin-helix motif K9N54_12595 PF02811 PHP domain K9N54_12595 PF01336 OB-fold nucleic acid binding domain K9N54_12600 PF01351 Ribonuclease HII K9N54_12605 PF02684 Lipid-A-disaccharide synthetase K9N54_12610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K9N54_12610 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_12615 PF07977 FabA-like domain K9N54_12620 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K9N54_12620 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_12625 PF03938 Outer membrane protein (OmpH-like) K9N54_12630 PF01103 Surface antigen K9N54_12630 PF07244 Surface antigen variable number repeat K9N54_12635 PF17820 PDZ domain K9N54_12635 PF02163 Peptidase family M50 K9N54_12640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain K9N54_12640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K9N54_12640 PF13288 DXP reductoisomerase C-terminal domain K9N54_12650 PF01255 Putative undecaprenyl diphosphate synthase K9N54_12655 PF01765 Ribosome recycling factor K9N54_12660 PF00696 Amino acid kinase family K9N54_12665 PF00889 Elongation factor TS K9N54_12670 PF00318 Ribosomal protein S2 K9N54_12675 PF00557 Metallopeptidase family M24 K9N54_12680 PF08335 GlnD PII-uridylyltransferase K9N54_12680 PF01966 HD domain K9N54_12680 PF01909 Nucleotidyltransferase domain K9N54_12680 PF01842 ACT domain K9N54_12685 PF11944 Protein of unknown function (DUF3461) K9N54_12690 PF00849 RNA pseudouridylate synthase K9N54_12695 PF04287 tRNA pseudouridine synthase C K9N54_12720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 K9N54_12725 PF03806 AbgT putative transporter family K9N54_12730 PF00444 Ribosomal protein L36 K9N54_12735 PF01197 Ribosomal protein L31 K9N54_12740 PF18389 TrmO C-terminal domain K9N54_12740 PF01980 tRNA-methyltransferase O K9N54_12745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K9N54_12745 PF03129 Anticodon binding domain K9N54_12745 PF04073 Aminoacyl-tRNA editing domain K9N54_12755 PF06786 Uncharacterised protein family (UPF0253) K9N54_12765 PF00209 Sodium:neurotransmitter symporter family K9N54_12780 PF01272 Transcription elongation factor, GreA/GreB, C-term K9N54_12780 PF03449 Transcription elongation factor, N-terminal K9N54_12785 PF00270 DEAD/DEAH box helicase K9N54_12785 PF00271 Helicase conserved C-terminal domain K9N54_12785 PF00570 HRDC domain K9N54_12785 PF16124 RecQ zinc-binding K9N54_12785 PF09382 RQC domain K9N54_12790 PF11798 IMS family HHH motif K9N54_12790 PF11799 impB/mucB/samB family C-terminal domain K9N54_12790 PF00817 impB/mucB/samB family K9N54_12805 PF02424 ApbE family K9N54_12810 PF00970 Oxidoreductase FAD-binding domain K9N54_12810 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_12810 PF00175 Oxidoreductase NAD-binding domain K9N54_12815 PF02508 Rnf-Nqr subunit, membrane protein K9N54_12820 PF02508 Rnf-Nqr subunit, membrane protein K9N54_12825 PF04205 FMN-binding domain K9N54_12830 PF03116 NQR2, RnfD, RnfE family K9N54_12835 PF11973 NQRA C-terminal domain K9N54_12835 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K9N54_12840 PF01722 BolA-like protein K9N54_12845 PF05175 Methyltransferase small domain K9N54_12850 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K9N54_12850 PF03923 Uncharacterized lipoprotein K9N54_12855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K9N54_12860 PF07690 Major Facilitator Superfamily K9N54_12870 PF04542 Sigma-70 region 2 K9N54_12870 PF04545 Sigma-70, region 4 K9N54_12890 PF03502 Nucleoside-specific channel-forming protein, Tsx K9N54_12895 PF02558 Ketopantoate reductase PanE/ApbA K9N54_12895 PF08546 Ketopantoate reductase PanE/ApbA C terminal K9N54_12900 PF01965 DJ-1/PfpI family K9N54_12905 PF00266 Aminotransferase class-V K9N54_12910 PF00990 Diguanylate cyclase, GGDEF domain K9N54_12910 PF17158 Membrane-associated sensor, integral membrane domain K9N54_12915 PF02657 Fe-S metabolism associated domain K9N54_12920 PF00899 ThiF family K9N54_12925 PF06725 3D domain K9N54_12925 PF03562 MltA specific insert domain K9N54_12935 PF00696 Amino acid kinase family K9N54_12935 PF00583 Acetyltransferase (GNAT) family K9N54_12945 PF13538 UvrD-like helicase C-terminal domain K9N54_12950 PF12705 PD-(D/E)XK nuclease superfamily K9N54_12950 PF00580 UvrD/REP helicase N-terminal domain K9N54_12950 PF13361 UvrD-like helicase C-terminal domain K9N54_12955 PF17946 RecC C-terminal domain K9N54_12960 PF00884 Sulfatase K9N54_12960 PF11893 Domain of unknown function (DUF3413) K9N54_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_12970 PF03466 LysR substrate binding domain K9N54_12975 PF07130 YebG protein K9N54_12980 PF14602 Hexapeptide repeat of succinyl-transferase K9N54_12980 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle K9N54_12985 PF03009 Glycerophosphoryl diester phosphodiesterase family K9N54_12990 PF07690 Major Facilitator Superfamily K9N54_12995 PF00230 Major intrinsic protein K9N54_13000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K9N54_13000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K9N54_13005 PF08220 DeoR-like helix-turn-helix domain K9N54_13005 PF00455 DeoR C terminal sensor domain K9N54_13010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase K9N54_13010 PF01266 FAD dependent oxidoreductase K9N54_13015 PF01544 CorA-like Mg2+ transporter protein K9N54_13030 PF01588 Putative tRNA binding domain K9N54_13035 PF00356 Bacterial regulatory proteins, lacI family K9N54_13050 PF00356 Bacterial regulatory proteins, lacI family K9N54_13055 PF01263 Aldose 1-epimerase K9N54_13060 PF10509 Galactokinase galactose-binding signature K9N54_13060 PF08544 GHMP kinases C terminal K9N54_13060 PF00288 GHMP kinases N terminal domain K9N54_13065 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain K9N54_13065 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain K9N54_13070 PF16363 GDP-mannose 4,6 dehydratase K9N54_13075 PF00356 Bacterial regulatory proteins, lacI family K9N54_13080 PF02836 Glycosyl hydrolases family 2, TIM barrel domain K9N54_13080 PF02837 Glycosyl hydrolases family 2, sugar binding domain K9N54_13080 PF00703 Glycosyl hydrolases family 2 K9N54_13080 PF16353 Domain of unknown function(DUF4981) K9N54_13080 PF02929 Beta galactosidase small chain K9N54_13085 PF04074 YhcH/YjgK/YiaL K9N54_13090 PF13520 Amino acid permease K9N54_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_13095 PF03466 LysR substrate binding domain K9N54_13125 PF00437 Type II/IV secretion system protein K9N54_13155 PF04972 BON domain K9N54_13155 PF00263 Bacterial type II and III secretion system protein K9N54_13155 PF13629 Pilus formation protein N terminal region K9N54_13180 PF12833 Helix-turn-helix domain K9N54_13180 PF02805 Metal binding domain of Ada K9N54_13185 PF00501 AMP-binding enzyme K9N54_13195 PF03466 LysR substrate binding domain K9N54_13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_13200 PF03144 Elongation factor Tu domain 2 K9N54_13200 PF00009 Elongation factor Tu GTP binding domain K9N54_13200 PF03764 Elongation factor G, domain IV K9N54_13200 PF14492 Elongation Factor G, domain II K9N54_13200 PF00679 Elongation factor G C-terminus K9N54_13205 PF18073 Rubredoxin metal binding domain K9N54_13215 PF18429 Domain of unknown function (DUF5609) K9N54_13225 PF01048 Phosphorylase superfamily K9N54_13230 PF01676 Metalloenzyme superfamily K9N54_13235 PF00591 Glycosyl transferase family, a/b domain K9N54_13235 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K9N54_13235 PF02885 Glycosyl transferase family, helical bundle domain K9N54_13240 PF01791 DeoC/LacD family aldolase K9N54_13245 PF07662 Na+ dependent nucleoside transporter C-terminus K9N54_13245 PF07670 Nucleoside recognition K9N54_13245 PF01773 Na+ dependent nucleoside transporter N-terminus K9N54_13250 PF01026 TatD related DNase K9N54_13260 PF00009 Elongation factor Tu GTP binding domain K9N54_13260 PF03144 Elongation factor Tu domain 2 K9N54_13260 PF16658 Class II release factor RF3, C-terminal domain K9N54_13280 PF13508 Acetyltransferase (GNAT) domain K9N54_13285 PF02036 SCP-2 sterol transfer family K9N54_13290 PF00563 EAL domain K9N54_13290 PF00990 Diguanylate cyclase, GGDEF domain K9N54_13290 PF03707 Bacterial signalling protein N terminal repeat K9N54_13295 PF01136 Peptidase family U32 K9N54_13300 PF01136 Peptidase family U32 K9N54_13305 PF01554 MatE K9N54_13315 PF07719 Tetratricopeptide repeat K9N54_13315 PF13181 Tetratricopeptide repeat K9N54_13320 PF00013 KH domain K9N54_13320 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K9N54_13320 PF01138 3' exoribonuclease family, domain 1 K9N54_13320 PF03725 3' exoribonuclease family, domain 2 K9N54_13320 PF00575 S1 RNA binding domain K9N54_13325 PF00312 Ribosomal protein S15 K9N54_13330 PF01509 TruB family pseudouridylate synthase (N terminal domain) K9N54_13330 PF16198 tRNA pseudouridylate synthase B C-terminal domain K9N54_13330 PF09157 Pseudouridine synthase II TruB, C-terminal K9N54_13335 PF02033 Ribosome-binding factor A K9N54_13340 PF00009 Elongation factor Tu GTP binding domain K9N54_13340 PF11987 Translation-initiation factor 2 K9N54_13340 PF08364 Bacterial translation initiation factor IF-2 associated region K9N54_13340 PF04760 Translation initiation factor IF-2, N-terminal region K9N54_13345 PF08529 NusA N-terminal domain K9N54_13345 PF00575 S1 RNA binding domain K9N54_13345 PF13184 NusA-like KH domain K9N54_13350 PF17384 RimP C-terminal SH3 domain K9N54_13350 PF02576 RimP N-terminal domain K9N54_13365 PF03840 Preprotein translocase SecG subunit K9N54_13370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K9N54_13370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K9N54_13370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K9N54_13370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K9N54_13375 PF00809 Pterin binding enzyme K9N54_13380 PF17862 AAA+ lid domain K9N54_13380 PF06480 FtsH Extracellular K9N54_13380 PF01434 Peptidase family M41 K9N54_13380 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_13385 PF01728 FtsJ-like methyltransferase K9N54_13390 PF01985 CRS1 / YhbY (CRM) domain K9N54_13395 PF01272 Transcription elongation factor, GreA/GreB, C-term K9N54_13395 PF03449 Transcription elongation factor, N-terminal K9N54_13400 PF13609 Gram-negative porin K9N54_13405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family K9N54_13415 PF00579 tRNA synthetases class I (W and Y) K9N54_13420 PF01551 Peptidase family M23 K9N54_13420 PF01476 LysM domain K9N54_13420 PF08525 Opacity-associated protein A N-terminal motif K9N54_13425 PF00873 AcrB/AcrD/AcrF family K9N54_13435 PF01521 Iron-sulphur cluster biosynthesis K9N54_13440 PF00202 Aminotransferase class-III K9N54_13445 PF01594 AI-2E family transporter K9N54_13450 PF08468 Methyltransferase small domain N-terminal K9N54_13450 PF05175 Methyltransferase small domain K9N54_13455 PF00512 His Kinase A (phospho-acceptor) domain K9N54_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_13455 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_13455 PF00072 Response regulator receiver domain K9N54_13460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_13465 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_13470 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_13470 PF12911 N-terminal TM domain of oligopeptide transport permease C K9N54_13475 PF00005 ABC transporter K9N54_13475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_13480 PF00005 ABC transporter K9N54_13480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_13490 PF01869 BadF/BadG/BcrA/BcrD ATPase family K9N54_13495 PF00728 Glycosyl hydrolase family 20, catalytic domain K9N54_13495 PF02838 Glycosyl hydrolase family 20, domain 2 K9N54_13500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K9N54_13500 PF06165 Glycosyltransferase family 36 K9N54_13505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K9N54_13505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K9N54_13505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K9N54_13505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K9N54_13510 PF08402 TOBE domain K9N54_13510 PF00005 ABC transporter K9N54_13520 PF13416 Bacterial extracellular solute-binding protein K9N54_13525 PF00909 Ammonium Transporter Family K9N54_13530 PF00543 Nitrogen regulatory protein P-II K9N54_13535 PF06062 Uncharacterised protein family (UPF0231) K9N54_13540 PF11791 Aconitate B N-terminal domain K9N54_13540 PF00330 Aconitase family (aconitate hydratase) K9N54_13540 PF06434 Aconitate hydratase 2 N-terminus K9N54_13545 PF01734 Patatin-like phospholipase K9N54_13550 PF14814 Bifunctional transglycosylase second domain K9N54_13550 PF00912 Transglycosylase K9N54_13550 PF00905 Penicillin binding protein transpeptidase domain K9N54_13555 PF00270 DEAD/DEAH box helicase K9N54_13555 PF00271 Helicase conserved C-terminal domain K9N54_13555 PF04408 Helicase associated domain (HA2) K9N54_13555 PF08482 ATP-dependent helicase C-terminal K9N54_13560 PF03749 Sugar fermentation stimulation protein RE domain K9N54_13560 PF17746 SfsA N-terminal OB domain K9N54_13565 PF01258 Prokaryotic dksA/traR C4-type zinc finger K9N54_13570 PF00749 tRNA synthetases class I (E and Q), catalytic domain K9N54_13575 PF12627 Probable RNA and SrmB- binding site of polymerase A K9N54_13575 PF12626 Polymerase A arginine-rich C-terminus K9N54_13575 PF01743 Poly A polymerase head domain K9N54_13580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K9N54_13585 PF02548 Ketopantoate hydroxymethyltransferase K9N54_13590 PF02569 Pantoate-beta-alanine ligase K9N54_13595 PF03279 Bacterial lipid A biosynthesis acyltransferase K9N54_13600 PF01061 ABC-2 type transporter K9N54_13605 PF00005 ABC transporter K9N54_13610 PF01740 STAS domain K9N54_13610 PF00916 Sulfate permease family K9N54_13615 PF00484 Carbonic anhydrase K9N54_13620 PF00156 Phosphoribosyl transferase domain K9N54_13625 PF00440 Bacterial regulatory proteins, tetR family K9N54_13630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K9N54_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_13635 PF00364 Biotin-requiring enzyme K9N54_13635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K9N54_13635 PF02817 e3 binding domain K9N54_13640 PF17831 Pyruvate dehydrogenase E1 component middle domain K9N54_13640 PF00456 Transketolase, thiamine diphosphate binding domain K9N54_13645 PF07729 FCD domain K9N54_13645 PF00392 Bacterial regulatory proteins, gntR family K9N54_13650 PF01510 N-acetylmuramoyl-L-alanine amidase K9N54_13655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K9N54_13655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K9N54_13660 PF00114 Pilin (bacterial filament) K9N54_13660 PF07963 Prokaryotic N-terminal methylation motif K9N54_13665 PF00437 Type II/IV secretion system protein K9N54_13665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K9N54_13670 PF00482 Type II secretion system (T2SS), protein F K9N54_13675 PF06750 Bacterial Peptidase A24 N-terminal domain K9N54_13675 PF01478 Type IV leader peptidase family K9N54_13680 PF01121 Dephospho-CoA kinase K9N54_13685 PF07072 Cell division protein K9N54_13690 PF03884 DNA gyrase inhibitor YacG K9N54_13695 PF01245 Ribosomal protein L19 K9N54_13700 PF01746 tRNA (Guanine-1)-methyltransferase K9N54_13705 PF05239 PRC-barrel domain K9N54_13705 PF01782 RimM N-terminal domain K9N54_13710 PF00886 Ribosomal protein S16 K9N54_13715 PF00448 SRP54-type protein, GTPase domain K9N54_13715 PF02881 SRP54-type protein, helical bundle domain K9N54_13715 PF02978 Signal peptide binding domain K9N54_13720 PF01578 Cytochrome C assembly protein K9N54_13725 PF03471 Transporter associated domain K9N54_13725 PF01595 Cyclin M transmembrane N-terminal domain K9N54_13725 PF00571 CBS domain K9N54_13730 PF02664 S-Ribosylhomocysteinase (LuxS) K9N54_13740 PF04262 Glutamate-cysteine ligase K9N54_13745 PF00675 Insulinase (Peptidase family M16) K9N54_13745 PF05193 Peptidase M16 inactive domain K9N54_13750 PF09335 SNARE associated Golgi protein K9N54_13755 PF00107 Zinc-binding dehydrogenase K9N54_13755 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_13760 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K9N54_13765 PF00364 Biotin-requiring enzyme K9N54_13765 PF00682 HMGL-like K9N54_13765 PF02436 Conserved carboxylase domain K9N54_13770 PF04277 Oxaloacetate decarboxylase, gamma chain K9N54_13820 PF02599 Global regulator protein family K9N54_13825 PF13840 ACT domain K9N54_13825 PF01842 ACT domain K9N54_13825 PF00696 Amino acid kinase family K9N54_13830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K9N54_13830 PF01411 tRNA synthetases class II (A) K9N54_13830 PF02272 DHHA1 domain K9N54_13835 PF02631 RecX family K9N54_13840 PF00154 recA bacterial DNA recombination protein K9N54_13845 PF02464 Competence-damaged protein K9N54_13850 PF01624 MutS domain I K9N54_13850 PF05188 MutS domain II K9N54_13850 PF05192 MutS domain III K9N54_13850 PF05190 MutS family domain IV K9N54_13850 PF00488 MutS domain V K9N54_13855 PF04545 Sigma-70, region 4 K9N54_13855 PF00140 Sigma-70 factor, region 1.2 K9N54_13855 PF04542 Sigma-70 region 2 K9N54_13855 PF04539 Sigma-70 region 3 K9N54_13860 PF01476 LysM domain K9N54_13860 PF01551 Peptidase family M23 K9N54_13870 PF01975 Survival protein SurE K9N54_13875 PF01142 tRNA pseudouridine synthase D (TruD) K9N54_13880 PF02542 YgbB family K9N54_13885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K9N54_13890 PF04977 Septum formation initiator K9N54_13895 PF00113 Enolase, C-terminal TIM barrel domain K9N54_13895 PF03952 Enolase, N-terminal domain K9N54_13900 PF06418 CTP synthase N-terminus K9N54_13900 PF00117 Glutamine amidotransferase class-I K9N54_13905 PF03819 MazG nucleotide pyrophosphohydrolase domain K9N54_13910 PF04607 Region found in RelA / SpoT proteins K9N54_13910 PF02824 TGS domain K9N54_13910 PF13291 ACT domain K9N54_13915 PF01938 TRAM domain K9N54_13915 PF05958 tRNA (Uracil-5-)-methyltransferase K9N54_13920 PF00072 Response regulator receiver domain K9N54_13920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K9N54_13920 PF01627 Hpt domain K9N54_13920 PF00672 HAMP domain K9N54_13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_13920 PF00512 His Kinase A (phospho-acceptor) domain K9N54_13925 PF01648 4'-phosphopantetheinyl transferase superfamily K9N54_13930 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K9N54_13935 PF02565 Recombination protein O C terminal K9N54_13935 PF11967 Recombination protein O N terminal K9N54_13940 PF07650 KH domain K9N54_13940 PF01926 50S ribosome-binding GTPase K9N54_13945 PF00035 Double-stranded RNA binding motif K9N54_13945 PF14622 Ribonuclease-III-like K9N54_13950 PF10502 Signal peptidase, peptidase S26 K9N54_13955 PF00679 Elongation factor G C-terminus K9N54_13955 PF00009 Elongation factor Tu GTP binding domain K9N54_13955 PF03144 Elongation factor Tu domain 2 K9N54_13955 PF06421 GTP-binding protein LepA C-terminus K9N54_13965 PF03888 MucB/RseB N-terminal domain K9N54_13965 PF17188 MucB/RseB C-terminal domain K9N54_13970 PF03873 Anti sigma-E protein RseA, C-terminal domain K9N54_13970 PF03872 Anti sigma-E protein RseA, N-terminal domain K9N54_13975 PF04542 Sigma-70 region 2 K9N54_13975 PF08281 Sigma-70, region 4 K9N54_13980 PF00890 FAD binding domain K9N54_13980 PF02910 Fumarate reductase flavoprotein C-term K9N54_13990 PF03937 Flavinator of succinate dehydrogenase K9N54_13995 PF01571 Aminomethyltransferase folate-binding domain K9N54_14010 PF01494 FAD binding domain K9N54_14015 PF01494 FAD binding domain K9N54_14020 PF03695 Uncharacterised protein family (UPF0149) K9N54_14025 PF05164 Cell division protein ZapA K9N54_14035 PF01812 5-formyltetrahydrofolate cyclo-ligase family K9N54_14040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K9N54_14045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K9N54_14045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K9N54_14045 PF01842 ACT domain K9N54_14050 PF04402 Protein of unknown function (DUF541) K9N54_14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_14055 PF03466 LysR substrate binding domain K9N54_14060 PF01810 LysE type translocator K9N54_14065 PF04073 Aminoacyl-tRNA editing domain K9N54_14070 PF05552 Conserved TM helix K9N54_14070 PF00924 Mechanosensitive ion channel K9N54_14075 PF01116 Fructose-bisphosphate aldolase class-II K9N54_14080 PF00162 Phosphoglycerate kinase K9N54_14085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K9N54_14085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K9N54_14090 PF07715 TonB-dependent Receptor Plug Domain K9N54_14090 PF00593 TonB dependent receptor K9N54_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_14095 PF03466 LysR substrate binding domain K9N54_14100 PF02779 Transketolase, pyrimidine binding domain K9N54_14100 PF00456 Transketolase, thiamine diphosphate binding domain K9N54_14100 PF02780 Transketolase, C-terminal domain K9N54_14105 PF00438 S-adenosylmethionine synthetase, N-terminal domain K9N54_14105 PF02772 S-adenosylmethionine synthetase, central domain K9N54_14105 PF02773 S-adenosylmethionine synthetase, C-terminal domain K9N54_14115 PF10263 SprT-like family K9N54_14115 PF17283 SprT-like zinc ribbon domain K9N54_14120 PF04231 Endonuclease I K9N54_14125 PF04452 RNA methyltransferase K9N54_14130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K9N54_14130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K9N54_14135 PF02622 Uncharacterized ACR, COG1678 K9N54_14140 PF03652 Holliday junction resolvase K9N54_14145 PF00437 Type II/IV secretion system protein K9N54_14150 PF00437 Type II/IV secretion system protein K9N54_14155 PF01168 Alanine racemase, N-terminal domain K9N54_14160 PF03807 NADP oxidoreductase coenzyme F420-dependent K9N54_14160 PF14748 Pyrroline-5-carboxylate reductase dimerisation K9N54_14165 PF02325 YGGT family K9N54_14170 PF02594 Uncharacterised ACR, YggU family COG1872 K9N54_14180 PF01725 Ham1 family K9N54_14185 PF06969 HemN C-terminal domain K9N54_14185 PF04055 Radical SAM superfamily K9N54_14190 PF04960 Glutaminase K9N54_14195 PF02086 D12 class N6 adenine-specific DNA methyltransferase K9N54_14200 PF02390 Putative methyltransferase K9N54_14205 PF00633 Helix-hairpin-helix motif K9N54_14205 PF14815 NUDIX domain K9N54_14205 PF00730 HhH-GPD superfamily base excision DNA repair protein K9N54_14210 PF04362 Bacterial Fe(2+) trafficking K9N54_14215 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain K9N54_14215 PF01464 Transglycosylase SLT domain K9N54_14255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_14255 PF17200 Single Cache domain 2 K9N54_14255 PF00672 HAMP domain K9N54_14285 PF00171 Aldehyde dehydrogenase family K9N54_14330 PF00072 Response regulator receiver domain K9N54_14335 PF00356 Bacterial regulatory proteins, lacI family K9N54_14335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K9N54_14340 PF04794 YdjC-like protein K9N54_14345 PF02056 Family 4 glycosyl hydrolase K9N54_14345 PF11975 Family 4 glycosyl hydrolase C-terminal domain K9N54_14350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit K9N54_14355 PF02378 Phosphotransferase system, EIIC K9N54_14360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_14365 PF01522 Polysaccharide deacetylase K9N54_14405 PF13356 Arm DNA-binding domain K9N54_14405 PF00589 Phage integrase family K9N54_14520 PF00563 EAL domain K9N54_14520 PF03707 Bacterial signalling protein N terminal repeat K9N54_14520 PF00990 Diguanylate cyclase, GGDEF domain K9N54_14535 PF00106 short chain dehydrogenase K9N54_14540 PF10011 Predicted membrane protein (DUF2254) K9N54_14550 PF03739 Lipopolysaccharide export system permease LptF/LptG K9N54_14555 PF03739 Lipopolysaccharide export system permease LptF/LptG K9N54_14560 PF00883 Cytosol aminopeptidase family, catalytic domain K9N54_14560 PF02789 Cytosol aminopeptidase family, N-terminal domain K9N54_14565 PF04364 DNA polymerase III chi subunit, HolC K9N54_14570 PF00133 tRNA synthetases class I (I, L, M and V) K9N54_14570 PF08264 Anticodon-binding domain of tRNA K9N54_14570 PF10458 Valyl tRNA synthetase tRNA binding arm K9N54_14580 PF00583 Acetyltransferase (GNAT) family K9N54_14605 PF02954 Bacterial regulatory protein, Fis family K9N54_14625 PF04717 Type VI secretion system, phage-baseplate injector K9N54_14705 PF06877 Regulator of ribonuclease activity B K9N54_14715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K9N54_14715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K9N54_14725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K9N54_14725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K9N54_14730 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K9N54_14730 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K9N54_14735 PF01042 Endoribonuclease L-PSP K9N54_14740 PF01553 Acyltransferase K9N54_14745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K9N54_14750 PF01722 BolA-like protein K9N54_14760 PF05494 MlaC protein K9N54_14765 PF02470 MlaD protein K9N54_14770 PF02405 Permease MlaE K9N54_14775 PF00005 ABC transporter K9N54_14780 PF01699 Sodium/calcium exchanger protein K9N54_14785 PF01380 SIS domain K9N54_14785 PF00571 CBS domain K9N54_14795 PF03968 OstA-like protein K9N54_14800 PF12399 Branched-chain amino acid ATP-binding cassette transporter K9N54_14800 PF00005 ABC transporter K9N54_14805 PF04963 Sigma-54 factor, core binding domain K9N54_14805 PF04552 Sigma-54, DNA binding domain K9N54_14805 PF00309 Sigma-54 factor, Activator interacting domain (AID) K9N54_14810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K9N54_14815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_14820 PF03668 P-loop ATPase protein family K9N54_14825 PF00381 PTS HPr component phosphorylation site K9N54_14830 PF00571 CBS domain K9N54_14830 PF01769 Divalent cation transporter K9N54_14830 PF03448 MgtE intracellular N domain K9N54_14835 PF01523 Putative modulator of DNA gyrase K9N54_14840 PF04751 Protein of unknown function (DUF615) K9N54_14845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K9N54_14845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K9N54_14850 PF00849 RNA pseudouridylate synthase K9N54_14860 PF12137 RNA polymerase recycling family C-terminal K9N54_14860 PF18339 RapA N-terminal Tudor like domain 1 K9N54_14860 PF00176 SNF2 family N-terminal domain K9N54_14860 PF00271 Helicase conserved C-terminal domain K9N54_14860 PF18337 RapA N-terminal Tudor like domain K9N54_14865 PF02562 PhoH-like protein K9N54_14865 PF13638 PIN domain K9N54_14870 PF01523 Putative modulator of DNA gyrase K9N54_14875 PF00795 Carbon-nitrogen hydrolase K9N54_14880 PF13502 AsmA-like C-terminal region K9N54_14880 PF13116 Protein of unknown function K9N54_14885 PF10150 Ribonuclease E/G family K9N54_14885 PF00575 S1 RNA binding domain K9N54_14890 PF02545 Maf-like protein K9N54_14895 PF04093 rod shape-determining protein MreD K9N54_14900 PF04085 rod shape-determining protein MreC K9N54_14940 PF07963 Prokaryotic N-terminal methylation motif K9N54_14950 PF00482 Type II secretion system (T2SS), protein F K9N54_14955 PF00437 Type II/IV secretion system protein K9N54_14955 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K9N54_14965 PF13401 AAA domain K9N54_14965 PF01471 Putative peptidoglycan binding domain K9N54_14970 PF07660 Secretin and TonB N terminus short domain K9N54_14970 PF11741 AMIN domain K9N54_14970 PF03958 Bacterial type II/III secretion system short domain K9N54_14970 PF00263 Bacterial type II and III secretion system protein K9N54_14990 PF00563 EAL domain K9N54_14990 PF17157 Gammaproteobacterial periplasmic sensor domain K9N54_14990 PF00990 Diguanylate cyclase, GGDEF domain K9N54_14995 PF00436 Single-strand binding protein family K9N54_15000 PF00196 Bacterial regulatory proteins, luxR family K9N54_15005 PF00483 Nucleotidyl transferase K9N54_15010 PF17760 UvrA interaction domain K9N54_15010 PF17755 UvrA DNA-binding domain K9N54_15010 PF00005 ABC transporter K9N54_15020 PF00266 Aminotransferase class-V K9N54_15025 PF00696 Amino acid kinase family K9N54_15025 PF01842 ACT domain K9N54_15030 PF02310 B12 binding domain K9N54_15030 PF02607 B12 binding domain K9N54_15030 PF02965 Vitamin B12 dependent methionine synthase, activation domain K9N54_15030 PF00809 Pterin binding enzyme K9N54_15030 PF02574 Homocysteine S-methyltransferase K9N54_15035 PF00999 Sodium/hydrogen exchanger family K9N54_15045 PF13358 DDE superfamily endonuclease K9N54_15100 PF01507 Phosphoadenosine phosphosulfate reductase family K9N54_15105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K9N54_15105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K9N54_15110 PF00667 FAD binding domain K9N54_15110 PF00258 Flavodoxin K9N54_15110 PF00175 Oxidoreductase NAD-binding domain K9N54_15130 PF01207 Dihydrouridine synthase (Dus) K9N54_15135 PF01475 Ferric uptake regulator family K9N54_15145 PF00342 Phosphoglucose isomerase K9N54_15150 PF01894 Uncharacterised protein family UPF0047 K9N54_15160 PF01168 Alanine racemase, N-terminal domain K9N54_15160 PF00842 Alanine racemase, C-terminal domain K9N54_15165 PF03796 DnaB-like helicase C terminal domain K9N54_15165 PF00772 DnaB-like helicase N terminal domain K9N54_15175 PF03948 Ribosomal protein L9, C-terminal domain K9N54_15175 PF01281 Ribosomal protein L9, N-terminal domain K9N54_15180 PF01084 Ribosomal protein S18 K9N54_15185 PF00436 Single-strand binding protein family K9N54_15190 PF01250 Ribosomal protein S6 K9N54_15195 PF00834 Ribulose-phosphate 3 epimerase family K9N54_15200 PF02086 D12 class N6 adenine-specific DNA methyltransferase K9N54_15210 PF01761 3-dehydroquinate synthase K9N54_15215 PF01202 Shikimate kinase K9N54_15220 PF03958 Bacterial type II/III secretion system short domain K9N54_15220 PF00263 Bacterial type II and III secretion system protein K9N54_15220 PF11741 AMIN domain K9N54_15220 PF07660 Secretin and TonB N terminus short domain K9N54_15225 PF04351 Pilus assembly protein, PilP K9N54_15235 PF05137 Fimbrial assembly protein (PilN) K9N54_15245 PF00912 Transglycosylase K9N54_15245 PF00905 Penicillin binding protein transpeptidase domain K9N54_15245 PF17092 Penicillin-binding protein OB-like domain K9N54_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_15250 PF03466 LysR substrate binding domain K9N54_15255 PF00462 Glutaredoxin K9N54_15255 PF08534 Redoxin K9N54_15265 PF00583 Acetyltransferase (GNAT) family K9N54_15265 PF14698 Argininosuccinate lyase C-terminal K9N54_15265 PF00206 Lyase K9N54_15270 PF00764 Arginosuccinate synthase K9N54_15275 PF00696 Amino acid kinase family K9N54_15280 PF01118 Semialdehyde dehydrogenase, NAD binding domain K9N54_15280 PF02774 Semialdehyde dehydrogenase, dimerisation domain K9N54_15285 PF07687 Peptidase dimerisation domain K9N54_15285 PF01546 Peptidase family M20/M25/M40 K9N54_15290 PF00311 Phosphoenolpyruvate carboxylase K9N54_15300 PF02219 Methylenetetrahydrofolate reductase K9N54_15305 PF00742 Homoserine dehydrogenase K9N54_15305 PF03447 Homoserine dehydrogenase, NAD binding domain K9N54_15305 PF00696 Amino acid kinase family K9N54_15310 PF01053 Cys/Met metabolism PLP-dependent enzyme K9N54_15315 PF01340 Met Apo-repressor, MetJ K9N54_15320 PF00390 Malic enzyme, N-terminal domain K9N54_15320 PF03949 Malic enzyme, NAD binding domain K9N54_15325 PF00210 Ferritin-like domain K9N54_15330 PF04324 BFD-like [2Fe-2S] binding domain K9N54_15335 PF00009 Elongation factor Tu GTP binding domain K9N54_15335 PF03144 Elongation factor Tu domain 2 K9N54_15335 PF03143 Elongation factor Tu C-terminal domain K9N54_15340 PF03144 Elongation factor Tu domain 2 K9N54_15340 PF00009 Elongation factor Tu GTP binding domain K9N54_15340 PF14492 Elongation Factor G, domain II K9N54_15340 PF03764 Elongation factor G, domain IV K9N54_15340 PF00679 Elongation factor G C-terminus K9N54_15345 PF00177 Ribosomal protein S7p/S5e K9N54_15350 PF00164 Ribosomal protein S12/S23 K9N54_15355 PF04077 DsrH like protein K9N54_15360 PF02635 DsrE/DsrF-like family K9N54_15365 PF02635 DsrE/DsrF-like family K9N54_15370 PF13309 HTH domain K9N54_15370 PF08348 YheO-like PAS domain K9N54_15375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_15375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K9N54_15385 PF04102 SlyX K9N54_15390 PF01112 Asparaginase K9N54_15395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_15405 PF02254 TrkA-N domain K9N54_15405 PF00999 Sodium/hydrogen exchanger family K9N54_15410 PF02525 Flavodoxin-like fold K9N54_15415 PF00005 ABC transporter K9N54_15415 PF12848 ABC transporter K9N54_15425 PF00561 alpha/beta hydrolase fold K9N54_15430 PF06794 Uncharacterised protein family (UPF0270) K9N54_15435 PF00485 Phosphoribulokinase / Uridine kinase family K9N54_15440 PF00027 Cyclic nucleotide-binding domain K9N54_15440 PF13545 Crp-like helix-turn-helix domain K9N54_15450 PF00171 Aldehyde dehydrogenase family K9N54_15455 PF04958 Arginine N-succinyltransferase beta subunit K9N54_15460 PF00202 Aminotransferase class-III K9N54_15465 PF00117 Glutamine amidotransferase class-I K9N54_15480 PF00579 tRNA synthetases class I (W and Y) K9N54_15485 PF13419 Haloacid dehalogenase-like hydrolase K9N54_15490 PF00588 SpoU rRNA Methylase family K9N54_15490 PF08032 RNA 2'-O ribose methyltransferase substrate binding K9N54_15495 PF17876 Cold shock domain K9N54_15495 PF08461 Ribonuclease R winged-helix domain K9N54_15495 PF08206 Ribonuclease B OB domain K9N54_15495 PF00773 RNB domain K9N54_15495 PF00575 S1 RNA binding domain K9N54_15500 PF02082 Transcriptional regulator K9N54_15505 PF00970 Oxidoreductase FAD-binding domain K9N54_15505 PF00042 Globin K9N54_15505 PF00175 Oxidoreductase NAD-binding domain K9N54_15510 PF08238 Sel1 repeat K9N54_15515 PF00709 Adenylosuccinate synthetase K9N54_15520 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) K9N54_15525 PF01145 SPFH domain / Band 7 family K9N54_15530 PF01145 SPFH domain / Band 7 family K9N54_15530 PF12221 Bacterial membrane protein N terminal K9N54_15535 PF16360 GTP-binding GTPase Middle Region K9N54_15535 PF13167 GTP-binding GTPase N-terminal K9N54_15535 PF01926 50S ribosome-binding GTPase K9N54_15540 PF17209 Hfq protein K9N54_15550 PF01119 DNA mismatch repair protein, C-terminal domain K9N54_15550 PF08676 MutL C terminal dimerisation domain K9N54_15555 PF01520 N-acetylmuramoyl-L-alanine amidase K9N54_15560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K9N54_15565 PF08331 Domain of unknown function (DUF1730) K9N54_15635 PF00929 Exonuclease K9N54_15640 PF03193 RsgA GTPase K9N54_15645 PF02666 Phosphatidylserine decarboxylase K9N54_15650 PF00939 Sodium:sulfate symporter transmembrane region K9N54_15655 PF02796 Helix-turn-helix domain of resolvase K9N54_15655 PF00239 Resolvase, N terminal domain K9N54_15695 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K9N54_15695 PF01676 Metalloenzyme superfamily K9N54_15700 PF00581 Rhodanese-like domain K9N54_15705 PF02556 Preprotein translocase subunit SecB K9N54_15710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K9N54_15710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K9N54_15715 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_15715 PF06426 Serine acetyltransferase, N-terminal K9N54_15720 PF01551 Peptidase family M23 K9N54_15730 PF08360 QacR-like protein, C-terminal region K9N54_15730 PF00440 Bacterial regulatory proteins, tetR family K9N54_15740 PF00152 tRNA synthetases class II (D, K and N) K9N54_15745 PF02910 Fumarate reductase flavoprotein C-term K9N54_15745 PF00890 FAD binding domain K9N54_15750 PF13085 2Fe-2S iron-sulfur cluster binding domain K9N54_15750 PF13183 4Fe-4S dicluster domain K9N54_15755 PF02300 Fumarate reductase subunit C K9N54_15760 PF02313 Fumarate reductase subunit D K9N54_15770 PF01132 Elongation factor P (EF-P) OB domain K9N54_15770 PF08207 Elongation factor P (EF-P) KOW-like domain K9N54_15770 PF09285 Elongation factor P, C-terminal K9N54_15775 PF04055 Radical SAM superfamily K9N54_15780 PF00842 Alanine racemase, C-terminal domain K9N54_15780 PF01168 Alanine racemase, N-terminal domain K9N54_15785 PF02308 MgtC family K9N54_15795 PF00118 TCP-1/cpn60 chaperonin family K9N54_15800 PF00166 Chaperonin 10 Kd subunit K9N54_15805 PF01554 MatE K9N54_15810 PF00365 Phosphofructokinase K9N54_15815 PF01545 Cation efflux family K9N54_15815 PF16916 Dimerisation domain of Zinc Transporter K9N54_15820 PF07813 LTXXQ motif family protein K9N54_15825 PF00072 Response regulator receiver domain K9N54_15825 PF00486 Transcriptional regulatory protein, C terminal K9N54_15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_15830 PF16527 Two-component sensor protein CpxA, periplasmic domain K9N54_15830 PF00512 His Kinase A (phospho-acceptor) domain K9N54_15830 PF00672 HAMP domain K9N54_15835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K9N54_15835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K9N54_15840 PF00588 SpoU rRNA Methylase family K9N54_15845 PF04186 FxsA cytoplasmic membrane protein K9N54_15850 PF10415 Fumarase C C-terminus K9N54_15850 PF00206 Lyase K9N54_15855 PF03605 Anaerobic c4-dicarboxylate membrane transporter K9N54_15860 PF11412 Disulphide bond corrector protein DsbC K9N54_15860 PF02683 Cytochrome C biogenesis protein transmembrane region K9N54_15865 PF00196 Bacterial regulatory proteins, luxR family K9N54_15865 PF00072 Response regulator receiver domain K9N54_15870 PF03471 Transporter associated domain K9N54_15870 PF00999 Sodium/hydrogen exchanger family K9N54_15870 PF02080 TrkA-C domain K9N54_15880 PF00474 Sodium:solute symporter family K9N54_15895 PF00206 Lyase K9N54_15895 PF10415 Fumarase C C-terminus K9N54_15900 PF00672 HAMP domain K9N54_15900 PF00512 His Kinase A (phospho-acceptor) domain K9N54_15900 PF00072 Response regulator receiver domain K9N54_15900 PF01627 Hpt domain K9N54_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_15905 PF12832 MFS_1 like family K9N54_15920 PF16177 Acetyl-coenzyme A synthetase N-terminus K9N54_15920 PF00501 AMP-binding enzyme K9N54_15920 PF13193 AMP-binding enzyme C-terminal domain K9N54_15925 PF01220 Dehydroquinase class II K9N54_15930 PF00364 Biotin-requiring enzyme K9N54_15935 PF02785 Biotin carboxylase C-terminal domain K9N54_15935 PF00289 Biotin carboxylase, N-terminal domain K9N54_15935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K9N54_15945 PF01207 Dihydrouridine synthase (Dus) K9N54_15950 PF02954 Bacterial regulatory protein, Fis family K9N54_15955 PF07690 Major Facilitator Superfamily K9N54_15960 PF12848 ABC transporter K9N54_15960 PF00005 ABC transporter K9N54_15965 PF05230 MASE2 domain K9N54_15965 PF00990 Diguanylate cyclase, GGDEF domain K9N54_16035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K9N54_16035 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K9N54_16035 PF01276 Orn/Lys/Arg decarboxylase, major domain K9N54_16040 PF13520 Amino acid permease K9N54_16045 PF00486 Transcriptional regulatory protein, C terminal K9N54_16045 PF18500 CadC C-terminal domain 1 K9N54_16050 PF13411 MerR HTH family regulatory protein K9N54_16055 PF01808 AICARFT/IMPCHase bienzyme K9N54_16055 PF02142 MGS-like domain K9N54_16060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K9N54_16060 PF02843 Phosphoribosylglycinamide synthetase, C domain K9N54_16060 PF02844 Phosphoribosylglycinamide synthetase, N domain K9N54_16070 PF00216 Bacterial DNA-binding protein K9N54_16075 PF01595 Cyclin M transmembrane N-terminal domain K9N54_16075 PF00571 CBS domain K9N54_16080 PF04222 Protein of unknown function (DUF416) K9N54_16085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K9N54_16090 PF03167 Uracil DNA glycosylase superfamily K9N54_16095 PF01208 Uroporphyrinogen decarboxylase (URO-D) K9N54_16110 PF00293 NUDIX domain K9N54_16110 PF09297 NADH pyrophosphatase zinc ribbon domain K9N54_16115 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K9N54_16120 PF00623 RNA polymerase Rpb1, domain 2 K9N54_16120 PF04983 RNA polymerase Rpb1, domain 3 K9N54_16120 PF05000 RNA polymerase Rpb1, domain 4 K9N54_16120 PF04998 RNA polymerase Rpb1, domain 5 K9N54_16120 PF04997 RNA polymerase Rpb1, domain 1 K9N54_16125 PF10385 RNA polymerase beta subunit external 1 domain K9N54_16125 PF04560 RNA polymerase Rpb2, domain 7 K9N54_16125 PF04563 RNA polymerase beta subunit K9N54_16125 PF04561 RNA polymerase Rpb2, domain 2 K9N54_16125 PF04565 RNA polymerase Rpb2, domain 3 K9N54_16125 PF00562 RNA polymerase Rpb2, domain 6 K9N54_16130 PF16320 Ribosomal protein L7/L12 dimerisation domain K9N54_16130 PF00542 Ribosomal protein L7/L12 C-terminal domain K9N54_16135 PF00466 Ribosomal protein L10 K9N54_16140 PF00687 Ribosomal protein L1p/L10e family K9N54_16145 PF03946 Ribosomal protein L11, N-terminal domain K9N54_16145 PF00298 Ribosomal protein L11, RNA binding domain K9N54_16150 PF02357 Transcription termination factor nusG K9N54_16150 PF00467 KOW motif K9N54_16155 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K9N54_16160 PF00009 Elongation factor Tu GTP binding domain K9N54_16160 PF03143 Elongation factor Tu C-terminal domain K9N54_16160 PF03144 Elongation factor Tu domain 2 K9N54_16185 PF00485 Phosphoribulokinase / Uridine kinase family K9N54_16190 PF08279 HTH domain K9N54_16190 PF03099 Biotin/lipoate A/B protein ligase family K9N54_16190 PF02237 Biotin protein ligase C terminal domain K9N54_16195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K9N54_16195 PF01565 FAD binding domain K9N54_16205 PF13091 PLD-like domain K9N54_16260 PF01177 Asp/Glu/Hydantoin racemase K9N54_16270 PF07715 TonB-dependent Receptor Plug Domain K9N54_16270 PF00593 TonB dependent receptor K9N54_16275 PF05958 tRNA (Uracil-5-)-methyltransferase K9N54_16285 PF00440 Bacterial regulatory proteins, tetR family K9N54_16290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K9N54_16290 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_16295 PF01554 MatE K9N54_16300 PF04072 Leucine carboxyl methyltransferase K9N54_16305 PF00717 Peptidase S24-like K9N54_16305 PF01726 LexA DNA binding domain K9N54_16310 PF01553 Acyltransferase K9N54_16315 PF01040 UbiA prenyltransferase family K9N54_16320 PF04345 Chorismate lyase K9N54_16325 PF03748 Flagellar basal body-associated protein FliL K9N54_16330 PF01694 Rhomboid family K9N54_16330 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease K9N54_16335 PF00581 Rhodanese-like domain K9N54_16340 PF00140 Sigma-70 factor, region 1.2 K9N54_16340 PF04542 Sigma-70 region 2 K9N54_16340 PF04545 Sigma-70, region 4 K9N54_16345 PF18075 FtsX extracellular domain K9N54_16350 PF00005 ABC transporter K9N54_16355 PF02881 SRP54-type protein, helical bundle domain K9N54_16355 PF00448 SRP54-type protein, GTPase domain K9N54_16370 PF01914 MarC family integral membrane protein K9N54_16420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K9N54_16420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K9N54_16425 PF01022 Bacterial regulatory protein, arsR family K9N54_16430 PF00563 EAL domain K9N54_16430 PF08668 HDOD domain K9N54_16435 PF01810 LysE type translocator K9N54_16440 PF12146 Serine aminopeptidase, S33 K9N54_16460 PF03942 DTW domain K9N54_16465 PF00563 EAL domain K9N54_16465 PF08495 FIST N domain K9N54_16465 PF10442 FIST C domain K9N54_16465 PF00990 Diguanylate cyclase, GGDEF domain K9N54_16470 PF13419 Haloacid dehalogenase-like hydrolase K9N54_16475 PF02899 Phage integrase, N-terminal SAM-like domain K9N54_16475 PF00589 Phage integrase family K9N54_16485 PF01678 Diaminopimelate epimerase K9N54_16490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K9N54_16490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K9N54_16500 PF01491 Frataxin-like domain K9N54_16505 PF12633 Adenylate cyclase NT domain K9N54_16505 PF01295 Adenylate cyclase, class-I K9N54_16510 PF03900 Porphobilinogen deaminase, C-terminal domain K9N54_16510 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K9N54_16515 PF02602 Uroporphyrinogen-III synthase HemD K9N54_16520 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase K9N54_16525 PF07219 HemY protein N-terminus K9N54_16565 PF00175 Oxidoreductase NAD-binding domain K9N54_16570 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_16575 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K9N54_16585 PF07497 Rho termination factor, RNA-binding domain K9N54_16585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_16585 PF07498 Rho termination factor, N-terminal domain K9N54_16590 PF00085 Thioredoxin K9N54_16595 PF00270 DEAD/DEAH box helicase K9N54_16595 PF00271 Helicase conserved C-terminal domain K9N54_16600 PF02541 Ppx/GppA phosphatase family K9N54_16605 PF02592 Putative vitamin uptake transporter K9N54_16615 PF00270 DEAD/DEAH box helicase K9N54_16615 PF00271 Helicase conserved C-terminal domain K9N54_16615 PF00570 HRDC domain K9N54_16615 PF16124 RecQ zinc-binding K9N54_16615 PF09382 RQC domain K9N54_16620 PF00892 EamA-like transporter family K9N54_16630 PF01810 LysE type translocator K9N54_16645 PF00580 UvrD/REP helicase N-terminal domain K9N54_16645 PF13361 UvrD-like helicase C-terminal domain K9N54_16655 PF05114 Protein of unknown function (DUF692) K9N54_16675 PF07690 Major Facilitator Superfamily K9N54_16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_16680 PF03466 LysR substrate binding domain K9N54_16685 PF00557 Metallopeptidase family M24 K9N54_16685 PF01321 Creatinase/Prolidase N-terminal domain K9N54_16690 PF06968 Biotin and Thiamin Synthesis associated domain K9N54_16690 PF04055 Radical SAM superfamily K9N54_16695 PF05690 Thiazole biosynthesis protein ThiG K9N54_16700 PF02597 ThiS family K9N54_16705 PF00899 ThiF family K9N54_16710 PF02581 Thiamine monophosphate synthase K9N54_16715 PF13667 ThiC-associated domain K9N54_16715 PF01964 Radical SAM ThiC family K9N54_16720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K9N54_16780 PF18766 SWI2/SNF2 ATPase K9N54_16780 PF12008 Type I restriction and modification enzyme - subunit R C terminal K9N54_16780 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K9N54_16820 PF12161 HsdM N-terminal domain K9N54_16820 PF02384 N-6 DNA Methylase K9N54_16835 PF18766 SWI2/SNF2 ATPase K9N54_16835 PF11867 Domain of unknown function (DUF3387) K9N54_16835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K9N54_16855 PF01381 Helix-turn-helix K9N54_16890 PF14659 Phage integrase, N-terminal SAM-like domain K9N54_16890 PF00589 Phage integrase family K9N54_16930 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_16935 PF07369 Protein of unknown function (DUF1488) K9N54_16940 PF08501 Shikimate dehydrogenase substrate binding domain K9N54_16940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K9N54_16940 PF01488 Shikimate / quinate 5-dehydrogenase K9N54_16945 PF01218 Coproporphyrinogen III oxidase K9N54_16950 PF01300 Telomere recombination K9N54_16955 PF00731 AIR carboxylase K9N54_16960 PF02222 ATP-grasp domain K9N54_16960 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K9N54_16965 PF01396 Topoisomerase DNA binding C4 zinc finger K9N54_16970 PF04361 Protein of unknown function (DUF494) K9N54_16975 PF02481 DNA recombination-mediator protein A K9N54_16975 PF17782 DprA winged helix domain K9N54_16985 PF01327 Polypeptide deformylase K9N54_16990 PF00551 Formyl transferase K9N54_16990 PF02911 Formyl transferase, C-terminal domain K9N54_16995 PF01029 NusB family K9N54_16995 PF01189 16S rRNA methyltransferase RsmB/F K9N54_17000 PF02254 TrkA-N domain K9N54_17000 PF02080 TrkA-C domain K9N54_17005 PF02386 Cation transport protein K9N54_17015 PF03006 Haemolysin-III related K9N54_17020 PF07070 SpoOM protein K9N54_17030 PF06288 Protein of unknown function (DUF1040) K9N54_17035 PF12801 4Fe-4S binding domain K9N54_17035 PF13746 4Fe-4S dicluster domain K9N54_17035 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K9N54_17040 PF01636 Phosphotransferase enzyme family K9N54_17045 PF01323 DSBA-like thioredoxin domain K9N54_17050 PF01553 Acyltransferase K9N54_17060 PF01078 Magnesium chelatase, subunit ChlI K9N54_17060 PF13335 Magnesium chelatase, subunit ChlI C-terminal K9N54_17065 PF00205 Thiamine pyrophosphate enzyme, central domain K9N54_17065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K9N54_17065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K9N54_17075 PF01063 Amino-transferase class IV K9N54_17080 PF00920 Dehydratase family K9N54_17085 PF00585 C-terminal regulatory domain of Threonine dehydratase K9N54_17085 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_17090 PF03466 LysR substrate binding domain K9N54_17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_17095 PF07690 Major Facilitator Superfamily K9N54_17100 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_17105 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_17110 PF12804 MobA-like NTP transferase domain K9N54_17110 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_17115 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K9N54_17115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K9N54_17120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_17120 PF02874 ATP synthase alpha/beta family, beta-barrel domain K9N54_17125 PF00231 ATP synthase K9N54_17130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_17130 PF00306 ATP synthase alpha/beta chain, C terminal domain K9N54_17130 PF02874 ATP synthase alpha/beta family, beta-barrel domain K9N54_17135 PF00213 ATP synthase delta (OSCP) subunit K9N54_17140 PF00430 ATP synthase B/B' CF(0) K9N54_17145 PF00137 ATP synthase subunit C K9N54_17150 PF00119 ATP synthase A chain K9N54_17155 PF03899 ATP synthase I chain K9N54_17160 PF17762 HTH domain found in ParB protein K9N54_17160 PF02195 ParB-like nuclease domain K9N54_17165 PF13614 AAA domain K9N54_17170 PF02527 rRNA small subunit methyltransferase G K9N54_17175 PF01134 Glucose inhibited division protein A K9N54_17175 PF13932 GidA associated domain K9N54_17180 PF00258 Flavodoxin K9N54_17185 PF01926 50S ribosome-binding GTPase K9N54_17185 PF12631 MnmE helical domain K9N54_17185 PF10396 GTP-binding protein TrmE N-terminus K9N54_17190 PF14849 YidC periplasmic domain K9N54_17190 PF02096 60Kd inner membrane protein K9N54_17195 PF01809 Putative membrane protein insertion efficiency factor K9N54_17200 PF00825 Ribonuclease P K9N54_17205 PF00468 Ribosomal protein L34 K9N54_17210 PF00005 ABC transporter K9N54_17215 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_17220 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_17225 PF00308 Bacterial dnaA protein K9N54_17225 PF11638 DnaA N-terminal domain K9N54_17225 PF08299 Bacterial dnaA protein helix-turn-helix K9N54_17230 PF00712 DNA polymerase III beta subunit, N-terminal domain K9N54_17230 PF02767 DNA polymerase III beta subunit, central domain K9N54_17230 PF02768 DNA polymerase III beta subunit, C-terminal domain K9N54_17235 PF02463 RecF/RecN/SMC N terminal domain K9N54_17240 PF00204 DNA gyrase B K9N54_17240 PF00986 DNA gyrase B subunit, carboxyl terminus K9N54_17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_17240 PF01751 Toprim domain K9N54_17240 PF18053 DNA gyrase B subunit insert domain K9N54_17250 PF00011 Hsp20/alpha crystallin family K9N54_17275 PF01327 Polypeptide deformylase K9N54_17280 PF00376 MerR family regulatory protein K9N54_17280 PF09278 MerR, DNA binding K9N54_17290 PF02253 Phospholipase A1 K9N54_17310 PF00005 ABC transporter K9N54_17310 PF00664 ABC transporter transmembrane region K9N54_17320 PF00929 Exonuclease K9N54_17320 PF02811 PHP domain K9N54_17320 PF14480 DNA polymerase III polC-type N-terminus I K9N54_17320 PF14579 Helix-hairpin-helix motif K9N54_17320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K9N54_17320 PF11490 DNA polymerase III polC-type N-terminus II K9N54_17320 PF07733 Bacterial DNA polymerase III alpha NTPase domain K9N54_17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_17325 PF03466 LysR substrate binding domain K9N54_17330 PF17848 Acetyl-coA carboxylase zinc finger domain K9N54_17330 PF01039 Carboxyl transferase domain K9N54_17380 PF02347 Glycine cleavage system P-protein K9N54_17385 PF01597 Glycine cleavage H-protein K9N54_17390 PF00464 Serine hydroxymethyltransferase K9N54_17400 PF01571 Aminomethyltransferase folate-binding domain K9N54_17400 PF08669 Glycine cleavage T-protein C-terminal barrel domain K9N54_17420 PF00873 AcrB/AcrD/AcrF family K9N54_17430 PF02378 Phosphotransferase system, EIIC K9N54_17430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_17435 PF00294 pfkB family carbohydrate kinase K9N54_17440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_17440 PF00381 PTS HPr component phosphorylation site K9N54_17445 PF00356 Bacterial regulatory proteins, lacI family K9N54_17445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K9N54_17460 PF00989 PAS fold K9N54_17460 PF00990 Diguanylate cyclase, GGDEF domain K9N54_17460 PF01590 GAF domain K9N54_17460 PF00563 EAL domain K9N54_17465 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_17470 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_17475 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_17480 PF00005 ABC transporter K9N54_17485 PF00224 Pyruvate kinase, barrel domain K9N54_17485 PF02887 Pyruvate kinase, alpha/beta domain K9N54_17490 PF07690 Major Facilitator Superfamily K9N54_17500 PF00512 His Kinase A (phospho-acceptor) domain K9N54_17500 PF00672 HAMP domain K9N54_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_17505 PF02954 Bacterial regulatory protein, Fis family K9N54_17505 PF00072 Response regulator receiver domain K9N54_17505 PF14532 Sigma-54 interaction domain K9N54_17515 PF00465 Iron-containing alcohol dehydrogenase K9N54_17520 PF12833 Helix-turn-helix domain K9N54_17520 PF06719 AraC-type transcriptional regulator N-terminus K9N54_17525 PF00704 Glycosyl hydrolases family 18 K9N54_17525 PF06483 Chitinase C K9N54_17530 PF00483 Nucleotidyl transferase K9N54_17535 PF01268 Formate--tetrahydrofolate ligase K9N54_17540 PF00294 pfkB family carbohydrate kinase K9N54_17555 PF11849 Domain of unknown function (DUF3369) K9N54_17560 PF13419 Haloacid dehalogenase-like hydrolase K9N54_17565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_17570 PF04336 Acyl carrier protein phosphodiesterase K9N54_17575 PF00271 Helicase conserved C-terminal domain K9N54_17575 PF00270 DEAD/DEAH box helicase K9N54_17580 PF00563 EAL domain K9N54_17580 PF12792 CSS motif domain associated with EAL K9N54_17595 PF01292 Prokaryotic cytochrome b561 K9N54_17600 PF04264 YceI-like domain K9N54_17605 PF01226 Formate/nitrite transporter K9N54_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_17610 PF03466 LysR substrate binding domain K9N54_17615 PF06496 Protein of unknown function (DUF1097) K9N54_17620 PF11398 Protein of unknown function (DUF2813) K9N54_17625 PF00149 Calcineurin-like phosphoesterase K9N54_17625 PF02872 5'-nucleotidase, C-terminal domain K9N54_17630 PF03741 Integral membrane protein TerC family K9N54_17645 PF12262 Bacterial virulence factor lipase N-terminal K9N54_17650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K9N54_17665 PF03061 Thioesterase superfamily K9N54_17675 PF12793 Sugar transport-related sRNA regulator N-term K9N54_17675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_17700 PF00684 DnaJ central domain K9N54_17700 PF01556 DnaJ C terminal domain K9N54_17700 PF00226 DnaJ domain K9N54_17710 PF13188 PAS domain K9N54_17710 PF00563 EAL domain K9N54_17710 PF03707 Bacterial signalling protein N terminal repeat K9N54_17710 PF00990 Diguanylate cyclase, GGDEF domain K9N54_17715 PF07055 Enoyl reductase FAD binding domain K9N54_17715 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K9N54_17715 PF12241 Trans-2-enoyl-CoA reductase catalytic region K9N54_17720 PF13472 GDSL-like Lipase/Acylhydrolase family K9N54_17725 PF00005 ABC transporter K9N54_17740 PF02626 Carboxyltransferase domain, subdomain A and B K9N54_17745 PF02682 Carboxyltransferase domain, subdomain C and D K9N54_17750 PF03746 LamB/YcsF family K9N54_17755 PF00563 EAL domain K9N54_17755 PF05231 MASE1 K9N54_17755 PF08447 PAS fold K9N54_17755 PF08448 PAS fold K9N54_17755 PF13426 PAS domain K9N54_17755 PF00990 Diguanylate cyclase, GGDEF domain K9N54_17760 PF16363 GDP-mannose 4,6 dehydratase K9N54_17765 PF07715 TonB-dependent Receptor Plug Domain K9N54_17765 PF04886 PT repeat K9N54_17765 PF00593 TonB dependent receptor K9N54_17770 PF03466 LysR substrate binding domain K9N54_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_17775 PF00583 Acetyltransferase (GNAT) family K9N54_17775 PF13380 CoA binding domain K9N54_17775 PF13607 Succinyl-CoA ligase like flavodoxin domain K9N54_17785 PF07478 D-ala D-ala ligase C-terminus K9N54_17785 PF01820 D-ala D-ala ligase N-terminus K9N54_17795 PF01253 Translation initiation factor SUI1 K9N54_17845 PF05707 Zonular occludens toxin (Zot) K9N54_18015 PF03466 LysR substrate binding domain K9N54_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_18025 PF00582 Universal stress protein family K9N54_18030 PF03701 Uncharacterised protein family (UPF0181) K9N54_18045 PF00486 Transcriptional regulatory protein, C terminal K9N54_18045 PF00072 Response regulator receiver domain K9N54_18055 PF02233 NAD(P) transhydrogenase beta subunit K9N54_18060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K9N54_18060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K9N54_18060 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch K9N54_18075 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18085 PF00360 Phytochrome region K9N54_18085 PF00563 EAL domain K9N54_18085 PF01590 GAF domain K9N54_18085 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18095 PF00005 ABC transporter K9N54_18095 PF03459 TOBE domain K9N54_18100 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_18110 PF07685 CobB/CobQ-like glutamine amidotransferase domain K9N54_18115 PF04076 Bacterial OB fold (BOF) protein K9N54_18125 PF18030 RimK PreATP-grasp domain K9N54_18125 PF08443 RimK-like ATP-grasp domain K9N54_18130 PF00155 Aminotransferase class I and II K9N54_18135 PF12833 Helix-turn-helix domain K9N54_18140 PF01554 MatE K9N54_18150 PF13597 Anaerobic ribonucleoside-triphosphate reductase K9N54_18150 PF03477 ATP cone domain K9N54_18160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_18165 PF00873 AcrB/AcrD/AcrF family K9N54_18175 PF04143 Sulphur transport K9N54_18190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K9N54_18190 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_18195 PF00384 Molybdopterin oxidoreductase K9N54_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_18200 PF03466 LysR substrate binding domain K9N54_18205 PF02634 FdhD/NarQ family K9N54_18210 PF07690 Major Facilitator Superfamily K9N54_18215 PF00072 Response regulator receiver domain K9N54_18215 PF00196 Bacterial regulatory proteins, luxR family K9N54_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_18220 PF07730 Histidine kinase K9N54_18220 PF05231 MASE1 K9N54_18225 PF07690 Major Facilitator Superfamily K9N54_18230 PF01238 Phosphomannose isomerase type I K9N54_18250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K9N54_18250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K9N54_18255 PF00085 Thioredoxin K9N54_18260 PF07690 Major Facilitator Superfamily K9N54_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_18265 PF00512 His Kinase A (phospho-acceptor) domain K9N54_18265 PF12833 Helix-turn-helix domain K9N54_18265 PF07494 Two component regulator propeller K9N54_18265 PF00072 Response regulator receiver domain K9N54_18265 PF07495 Y_Y_Y domain K9N54_18270 PF01554 MatE K9N54_18275 PF11756 Nitrous oxide-stimulated promoter K9N54_18290 PF00593 TonB dependent receptor K9N54_18290 PF07715 TonB-dependent Receptor Plug Domain K9N54_18300 PF03605 Anaerobic c4-dicarboxylate membrane transporter K9N54_18315 PF10414 Sirohaem synthase dimerisation region K9N54_18315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K9N54_18315 PF14824 Sirohaem biosynthesis protein central K9N54_18320 PF01226 Formate/nitrite transporter K9N54_18325 PF13806 Rieske-like [2Fe-2S] domain K9N54_18330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K9N54_18330 PF18267 Rubredoxin NAD+ reductase C-terminal domain K9N54_18330 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_18330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K9N54_18330 PF04324 BFD-like [2Fe-2S] binding domain K9N54_18335 PF01272 Transcription elongation factor, GreA/GreB, C-term K9N54_18335 PF14760 Rnk N-terminus K9N54_18370 PF13462 Thioredoxin K9N54_18370 PF06965 Na+/H+ antiporter 1 K9N54_18390 PF09154 Domain of unknown function (DUF1939) K9N54_18390 PF00128 Alpha amylase, catalytic domain K9N54_18405 PF00672 HAMP domain K9N54_18405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_18410 PF00842 Alanine racemase, C-terminal domain K9N54_18410 PF01168 Alanine racemase, N-terminal domain K9N54_18425 PF01565 FAD binding domain K9N54_18425 PF09330 D-lactate dehydrogenase, membrane binding K9N54_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_18430 PF03466 LysR substrate binding domain K9N54_18445 PF05762 VWA domain containing CoxE-like protein K9N54_18450 PF07728 AAA domain (dynein-related subfamily) K9N54_18450 PF17868 AAA lid domain K9N54_18450 PF12592 Protein of unknown function (DUF3763) K9N54_18460 PF01212 Beta-eliminating lyase K9N54_18465 PF00034 Cytochrome c K9N54_18470 PF03606 C4-dicarboxylate anaerobic carrier K9N54_18480 PF07690 Major Facilitator Superfamily K9N54_18490 PF08212 Lipocalin-like domain K9N54_18510 PF13476 AAA domain K9N54_18515 PF00149 Calcineurin-like phosphoesterase K9N54_18515 PF12320 Type 5 capsule protein repressor C-terminal domain K9N54_18530 PF04717 Type VI secretion system, phage-baseplate injector K9N54_18530 PF06715 Gp5 C-terminal repeat (3 copies) K9N54_18540 PF00004 ATPase family associated with various cellular activities (AAA) K9N54_18540 PF10431 C-terminal, D2-small domain, of ClpB protein K9N54_18540 PF17871 AAA lid domain K9N54_18540 PF07724 AAA domain (Cdc48 subfamily) K9N54_18550 PF05947 Type VI secretion system, TssF K9N54_18565 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K9N54_18570 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K9N54_18575 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 K9N54_18595 PF14331 ImcF-related N-terminal domain K9N54_18595 PF06761 Intracellular multiplication and human macrophage-killing K9N54_18595 PF06744 Type VI secretion protein IcmF C-terminal K9N54_18600 PF00691 OmpA family K9N54_18600 PF13677 Membrane MotB of proton-channel complex MotA/MotB K9N54_18605 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K9N54_18620 PF00069 Protein kinase domain K9N54_18620 PF03793 PASTA domain K9N54_18645 PF00072 Response regulator receiver domain K9N54_18645 PF00211 Adenylate and Guanylate cyclase catalytic domain K9N54_18660 PF00440 Bacterial regulatory proteins, tetR family K9N54_18660 PF08361 MAATS-type transcriptional repressor, C-terminal region K9N54_18675 PF04324 BFD-like [2Fe-2S] binding domain K9N54_18675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K9N54_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_18675 PF13806 Rieske-like [2Fe-2S] domain K9N54_18675 PF18267 Rubredoxin NAD+ reductase C-terminal domain K9N54_18675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K9N54_18680 PF00005 ABC transporter K9N54_18685 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_18690 PF00005 ABC transporter K9N54_18695 PF08376 Nitrate and nitrite sensing K9N54_18695 PF03861 ANTAR domain K9N54_18700 PF01738 Dienelactone hydrolase family K9N54_18705 PF00591 Glycosyl transferase family, a/b domain K9N54_18705 PF02885 Glycosyl transferase family, helical bundle domain K9N54_18715 PF01568 Molydopterin dinucleotide binding domain K9N54_18715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_18715 PF00384 Molybdopterin oxidoreductase K9N54_18725 PF03222 Tryptophan/tyrosine permease family K9N54_18730 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18730 PF00072 Response regulator receiver domain K9N54_18740 PF00082 Subtilase family K9N54_18740 PF01483 Proprotein convertase P-domain K9N54_18750 PF00245 Alkaline phosphatase K9N54_18765 PF00486 Transcriptional regulatory protein, C terminal K9N54_18765 PF00072 Response regulator receiver domain K9N54_18785 PF01048 Phosphorylase superfamily K9N54_18790 PF04973 Nicotinamide mononucleotide transporter K9N54_18800 PF00356 Bacterial regulatory proteins, lacI family K9N54_18805 PF00294 pfkB family carbohydrate kinase K9N54_18810 PF13407 Periplasmic binding protein domain K9N54_18815 PF02653 Branched-chain amino acid transport system / permease component K9N54_18820 PF00005 ABC transporter K9N54_18825 PF05025 RbsD / FucU transport protein family K9N54_18830 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18830 PF00563 EAL domain K9N54_18835 PF01048 Phosphorylase superfamily K9N54_18875 PF04116 Fatty acid hydroxylase superfamily K9N54_18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_18890 PF00512 His Kinase A (phospho-acceptor) domain K9N54_18890 PF09308 LuxQ, periplasmic K9N54_18890 PF00072 Response regulator receiver domain K9N54_18895 PF00034 Cytochrome c K9N54_18895 PF03150 Di-haem cytochrome c peroxidase K9N54_18900 PF00563 EAL domain K9N54_18900 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18900 PF03707 Bacterial signalling protein N terminal repeat K9N54_18900 PF13188 PAS domain K9N54_18910 PF16200 C-terminal region of band_7 K9N54_18910 PF01145 SPFH domain / Band 7 family K9N54_18920 PF00881 Nitroreductase family K9N54_18925 PF00005 ABC transporter K9N54_18925 PF00571 CBS domain K9N54_18930 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_18935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K9N54_18940 PF05199 GMC oxidoreductase K9N54_18940 PF00732 GMC oxidoreductase K9N54_18945 PF00171 Aldehyde dehydrogenase family K9N54_18950 PF13977 BetI-type transcriptional repressor, C-terminal K9N54_18950 PF00440 Bacterial regulatory proteins, tetR family K9N54_18955 PF17151 Periplasmic sensor domain K9N54_18955 PF00990 Diguanylate cyclase, GGDEF domain K9N54_18965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K9N54_18965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K9N54_18975 PF00378 Enoyl-CoA hydratase/isomerase K9N54_18980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_18980 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_18980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_18985 PF00171 Aldehyde dehydrogenase family K9N54_18990 PF00108 Thiolase, N-terminal domain K9N54_18990 PF02803 Thiolase, C-terminal domain K9N54_18995 PF00376 MerR family regulatory protein K9N54_18995 PF09278 MerR, DNA binding K9N54_19000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_19000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_19000 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_19005 PF01039 Carboxyl transferase domain K9N54_19010 PF00378 Enoyl-CoA hydratase/isomerase K9N54_19015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K9N54_19015 PF00364 Biotin-requiring enzyme K9N54_19015 PF00289 Biotin carboxylase, N-terminal domain K9N54_19015 PF18140 Propionyl-coenzyme A carboxylase BT domain K9N54_19015 PF02785 Biotin carboxylase C-terminal domain K9N54_19020 PF00682 HMGL-like K9N54_19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19025 PF00072 Response regulator receiver domain K9N54_19025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K9N54_19025 PF01627 Hpt domain K9N54_19025 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19025 PF00672 HAMP domain K9N54_19040 PF12794 Mechanosensitive ion channel inner membrane domain 1 K9N54_19040 PF00924 Mechanosensitive ion channel K9N54_19040 PF12795 Mechanosensitive ion channel porin domain K9N54_19045 PF12464 Maltose acetyltransferase K9N54_19045 PF14602 Hexapeptide repeat of succinyl-transferase K9N54_19050 PF00155 Aminotransferase class I and II K9N54_19050 PF00392 Bacterial regulatory proteins, gntR family K9N54_19055 PF01654 Cytochrome bd terminal oxidase subunit I K9N54_19060 PF02322 Cytochrome bd terminal oxidase subunit II K9N54_19070 PF02567 Phenazine biosynthesis-like protein K9N54_19075 PF02627 Carboxymuconolactone decarboxylase family K9N54_19080 PF13411 MerR HTH family regulatory protein K9N54_19090 PF00034 Cytochrome c K9N54_19100 PF05724 Thiopurine S-methyltransferase (TPMT) K9N54_19105 PF00501 AMP-binding enzyme K9N54_19105 PF14535 AMP-binding enzyme C-terminal domain K9N54_19110 PF00005 ABC transporter K9N54_19135 PF00005 ABC transporter K9N54_19135 PF12399 Branched-chain amino acid ATP-binding cassette transporter K9N54_19145 PF01012 Electron transfer flavoprotein domain K9N54_19150 PF01012 Electron transfer flavoprotein domain K9N54_19150 PF00766 Electron transfer flavoprotein FAD-binding domain K9N54_19155 PF00501 AMP-binding enzyme K9N54_19155 PF13193 AMP-binding enzyme C-terminal domain K9N54_19160 PF00478 IMP dehydrogenase / GMP reductase domain K9N54_19165 PF01256 Carbohydrate kinase K9N54_19165 PF03853 YjeF-related protein N-terminus K9N54_19175 PF00072 Response regulator receiver domain K9N54_19180 PF00248 Aldo/keto reductase family K9N54_19195 PF00654 Voltage gated chloride channel K9N54_19205 PF01566 Natural resistance-associated macrophage protein K9N54_19210 PF01227 GTP cyclohydrolase I K9N54_19215 PF00994 Probable molybdopterin binding domain K9N54_19215 PF03454 MoeA C-terminal region (domain IV) K9N54_19215 PF03453 MoeA N-terminal region (domain I and II) K9N54_19220 PF00899 ThiF family K9N54_19240 PF00581 Rhodanese-like domain K9N54_19245 PF03707 Bacterial signalling protein N terminal repeat K9N54_19245 PF00563 EAL domain K9N54_19245 PF00990 Diguanylate cyclase, GGDEF domain K9N54_19250 PF00704 Glycosyl hydrolases family 18 K9N54_19250 PF08329 Chitinase A, N-terminal domain K9N54_19260 PF00923 Transaldolase/Fructose-6-phosphate aldolase K9N54_19265 PF02780 Transketolase, C-terminal domain K9N54_19265 PF02779 Transketolase, pyrimidine binding domain K9N54_19265 PF00456 Transketolase, thiamine diphosphate binding domain K9N54_19270 PF08447 PAS fold K9N54_19270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_19275 PF07690 Major Facilitator Superfamily K9N54_19280 PF00793 DAHP synthetase I family K9N54_19285 PF00691 OmpA family K9N54_19285 PF01389 OmpA-like transmembrane domain K9N54_19290 PF13419 Haloacid dehalogenase-like hydrolase K9N54_19295 PF00472 RF-1 domain K9N54_19300 PF00672 HAMP domain K9N54_19300 PF12729 Four helix bundle sensory module for signal transduction K9N54_19300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_19305 PF00873 AcrB/AcrD/AcrF family K9N54_19310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_19315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K9N54_19320 PF01546 Peptidase family M20/M25/M40 K9N54_19320 PF07687 Peptidase dimerisation domain K9N54_19335 PF00072 Response regulator receiver domain K9N54_19335 PF00196 Bacterial regulatory proteins, luxR family K9N54_19340 PF00672 HAMP domain K9N54_19340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19340 PF07730 Histidine kinase K9N54_19340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term K9N54_19345 PF12838 4Fe-4S dicluster domain K9N54_19345 PF13187 4Fe-4S dicluster domain K9N54_19355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_19355 PF00384 Molybdopterin oxidoreductase K9N54_19355 PF01568 Molydopterin dinucleotide binding domain K9N54_19360 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K9N54_19365 PF03264 NapC/NirT cytochrome c family, N-terminal region K9N54_19375 PF00561 alpha/beta hydrolase fold K9N54_19375 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K9N54_19385 PF02803 Thiolase, C-terminal domain K9N54_19385 PF00108 Thiolase, N-terminal domain K9N54_19390 PF00106 short chain dehydrogenase K9N54_19405 PF07549 SecD/SecF GG Motif K9N54_19405 PF02355 Protein export membrane protein K9N54_19410 PF13721 SecD export protein N-terminal TM region K9N54_19410 PF07549 SecD/SecF GG Motif K9N54_19410 PF02355 Protein export membrane protein K9N54_19435 PF01037 Lrp/AsnC ligand binding domain K9N54_19455 PF00529 HlyD membrane-fusion protein of T1SS K9N54_19455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19465 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19465 PF00072 Response regulator receiver domain K9N54_19465 PF09308 LuxQ, periplasmic K9N54_19470 PF13407 Periplasmic binding protein domain K9N54_19475 PF01541 GIY-YIG catalytic domain K9N54_19480 PF04337 Protein of unknown function, DUF480 K9N54_19495 PF04363 Protein of unknown function (DUF496) K9N54_19500 PF01554 MatE K9N54_19505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K9N54_19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19510 PF01627 Hpt domain K9N54_19510 PF00072 Response regulator receiver domain K9N54_19510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K9N54_19510 PF00672 HAMP domain K9N54_19510 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K9N54_19515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K9N54_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_19530 PF03466 LysR substrate binding domain K9N54_19535 PF01037 Lrp/AsnC ligand binding domain K9N54_19535 PF13404 AsnC-type helix-turn-helix domain K9N54_19540 PF13520 Amino acid permease K9N54_19545 PF00155 Aminotransferase class I and II K9N54_19545 PF00392 Bacterial regulatory proteins, gntR family K9N54_19555 PF03109 ABC1 family K9N54_19560 PF00571 CBS domain K9N54_19560 PF01769 Divalent cation transporter K9N54_19560 PF03448 MgtE intracellular N domain K9N54_19565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin K9N54_19570 PF07969 Amidohydrolase family K9N54_19580 PF01966 HD domain K9N54_19590 PF07690 Major Facilitator Superfamily K9N54_19600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K9N54_19605 PF00255 Glutathione peroxidase K9N54_19620 PF01323 DSBA-like thioredoxin domain K9N54_19635 PF00106 short chain dehydrogenase K9N54_19640 PF00072 Response regulator receiver domain K9N54_19640 PF00486 Transcriptional regulatory protein, C terminal K9N54_19645 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19645 PF00672 HAMP domain K9N54_19645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19655 PF01219 Prokaryotic diacylglycerol kinase K9N54_19660 PF08019 Phosphoethanolamine transferase EptA/EptB K9N54_19660 PF00884 Sulfatase K9N54_19665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K9N54_19690 PF01047 MarR family K9N54_19700 PF01734 Patatin-like phospholipase K9N54_19705 PF05726 Pirin C-terminal cupin domain K9N54_19705 PF02678 Pirin K9N54_19710 PF00313 'Cold-shock' DNA-binding domain K9N54_19725 PF00962 Adenosine/AMP deaminase K9N54_19730 PF00462 Glutaredoxin K9N54_19730 PF08534 Redoxin K9N54_19740 PF00768 D-alanyl-D-alanine carboxypeptidase K9N54_19740 PF07943 Penicillin-binding protein 5, C-terminal domain K9N54_19745 PF02798 Glutathione S-transferase, N-terminal domain K9N54_19750 PF00440 Bacterial regulatory proteins, tetR family K9N54_19750 PF02909 Tetracyclin repressor-like, C-terminal domain K9N54_19755 PF01872 RibD C-terminal domain K9N54_19805 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_19810 PF14785 Maltose transport system permease protein MalF P2 domain K9N54_19810 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_19815 PF01547 Bacterial extracellular solute-binding protein K9N54_19820 PF00005 ABC transporter K9N54_19820 PF08402 TOBE domain K9N54_19825 PF02397 Bacterial sugar transferase K9N54_19840 PF13807 G-rich domain on putative tyrosine kinase K9N54_19840 PF02706 Chain length determinant protein K9N54_19840 PF13614 AAA domain K9N54_19850 PF00534 Glycosyl transferases group 1 K9N54_19880 PF04266 ASCH domain K9N54_19885 PF16925 Tetracyclin repressor-like, C-terminal domain K9N54_19885 PF00440 Bacterial regulatory proteins, tetR family K9N54_19890 PF16884 N-terminal domain of oxidoreductase K9N54_19890 PF00107 Zinc-binding dehydrogenase K9N54_19895 PF13417 Glutathione S-transferase, N-terminal domain K9N54_19900 PF00199 Catalase K9N54_19900 PF06628 Catalase-related immune-responsive K9N54_19905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K9N54_19905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K9N54_19915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_19925 PF12833 Helix-turn-helix domain K9N54_19930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_19930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_19935 PF01238 Phosphomannose isomerase type I K9N54_19945 PF13419 Haloacid dehalogenase-like hydrolase K9N54_19950 PF00127 Copper binding proteins, plastocyanin/azurin family K9N54_19955 PF00563 EAL domain K9N54_19955 PF00990 Diguanylate cyclase, GGDEF domain K9N54_19955 PF03707 Bacterial signalling protein N terminal repeat K9N54_19960 PF02386 Cation transport protein K9N54_19965 PF02080 TrkA-C domain K9N54_19965 PF02254 TrkA-N domain K9N54_19970 PF00072 Response regulator receiver domain K9N54_19970 PF00486 Transcriptional regulatory protein, C terminal K9N54_19975 PF02702 Osmosensitive K+ channel His kinase sensor domain K9N54_19975 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19975 PF02702 Osmosensitive K+ channel His kinase sensor domain K9N54_19975 PF00512 His Kinase A (phospho-acceptor) domain K9N54_19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19975 PF13493 Domain of unknown function (DUF4118) K9N54_19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_19975 PF13493 Domain of unknown function (DUF4118) K9N54_19980 PF00664 ABC transporter transmembrane region K9N54_19980 PF00005 ABC transporter K9N54_19985 PF00593 TonB dependent receptor K9N54_19985 PF07715 TonB-dependent Receptor Plug Domain K9N54_19990 PF00005 ABC transporter K9N54_19995 PF01497 Periplasmic binding protein K9N54_20000 PF01032 FecCD transport family K9N54_20010 PF01389 OmpA-like transmembrane domain K9N54_20010 PF00691 OmpA family K9N54_20025 PF00529 HlyD membrane-fusion protein of T1SS K9N54_20025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_20030 PF00005 ABC transporter K9N54_20030 PF00664 ABC transporter transmembrane region K9N54_20040 PF00196 Bacterial regulatory proteins, luxR family K9N54_20045 PF00196 Bacterial regulatory proteins, luxR family K9N54_20055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_20055 PF02743 Cache domain K9N54_20055 PF00672 HAMP domain K9N54_20060 PF07726 ATPase family associated with various cellular activities (AAA) K9N54_20060 PF17863 AAA lid domain K9N54_20065 PF01882 Protein of unknown function DUF58 K9N54_20075 PF13519 von Willebrand factor type A domain K9N54_20080 PF13519 von Willebrand factor type A domain K9N54_20080 PF07584 Aerotolerance regulator N-terminal K9N54_20100 PF00005 ABC transporter K9N54_20105 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_20110 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_20115 PF12849 PBP superfamily domain K9N54_20120 PF00672 HAMP domain K9N54_20120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_20140 PF00593 TonB dependent receptor K9N54_20140 PF07715 TonB-dependent Receptor Plug Domain K9N54_20145 PF00326 Prolyl oligopeptidase family K9N54_20145 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K9N54_20150 PF00270 DEAD/DEAH box helicase K9N54_20150 PF00271 Helicase conserved C-terminal domain K9N54_20160 PF17969 L,D-transpeptidase C-terminal domain K9N54_20160 PF01476 LysM domain K9N54_20160 PF03734 L,D-transpeptidase catalytic domain K9N54_20165 PF03441 FAD binding domain of DNA photolyase K9N54_20165 PF00875 DNA photolyase K9N54_20170 PF13411 MerR HTH family regulatory protein K9N54_20175 PF08349 Protein of unknown function (DUF1722) K9N54_20180 PF01048 Phosphorylase superfamily K9N54_20195 PF00990 Diguanylate cyclase, GGDEF domain K9N54_20200 PF11742 Protein of unknown function (DUF3302) K9N54_20205 PF00529 HlyD membrane-fusion protein of T1SS K9N54_20205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_20210 PF07155 ECF-type riboflavin transporter, S component K9N54_20215 PF00005 ABC transporter K9N54_20215 PF12558 ATP-binding cassette cobalt transporter K9N54_20230 PF12801 4Fe-4S binding domain K9N54_20230 PF13237 4Fe-4S dicluster domain K9N54_20235 PF12838 4Fe-4S dicluster domain K9N54_20235 PF12800 4Fe-4S binding domain K9N54_20240 PF00583 Acetyltransferase (GNAT) family K9N54_20255 PF12945 Flagellar protein YcgR K9N54_20255 PF07238 PilZ domain K9N54_20260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_20260 PF00672 HAMP domain K9N54_20265 PF05362 Lon protease (S16) C-terminal proteolytic domain K9N54_20265 PF13654 AAA domain K9N54_20275 PF00005 ABC transporter K9N54_20275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_20280 PF00326 Prolyl oligopeptidase family K9N54_20280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K9N54_20285 PF03466 LysR substrate binding domain K9N54_20285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20290 PF02652 L-lactate permease K9N54_20295 PF01070 FMN-dependent dehydrogenase K9N54_20305 PF00924 Mechanosensitive ion channel K9N54_20310 PF00194 Eukaryotic-type carbonic anhydrase K9N54_20340 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_20340 PF00107 Zinc-binding dehydrogenase K9N54_20345 PF00155 Aminotransferase class I and II K9N54_20350 PF00563 EAL domain K9N54_20350 PF00990 Diguanylate cyclase, GGDEF domain K9N54_20350 PF03707 Bacterial signalling protein N terminal repeat K9N54_20355 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_20360 PF00266 Aminotransferase class-V K9N54_20365 PF00080 Copper/zinc superoxide dismutase (SODC) K9N54_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_20370 PF00072 Response regulator receiver domain K9N54_20370 PF13426 PAS domain K9N54_20370 PF08448 PAS fold K9N54_20370 PF00512 His Kinase A (phospho-acceptor) domain K9N54_20375 PF00486 Transcriptional regulatory protein, C terminal K9N54_20375 PF00072 Response regulator receiver domain K9N54_20400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20400 PF03466 LysR substrate binding domain K9N54_20405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_20440 PF03466 LysR substrate binding domain K9N54_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20455 PF18269 T3SS EscN ATPase C-terminal domain K9N54_20455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K9N54_20465 PF14841 FliG middle domain K9N54_20465 PF14842 FliG N-terminal domain K9N54_20465 PF01706 FliG C-terminal domain K9N54_20470 PF08345 Flagellar M-ring protein C-terminal K9N54_20470 PF01514 Secretory protein of YscJ/FliF family K9N54_20475 PF02049 Flagellar hook-basal body complex protein FliE K9N54_20480 PF02954 Bacterial regulatory protein, Fis family K9N54_20480 PF00158 Sigma-54 interaction domain K9N54_20480 PF00072 Response regulator receiver domain K9N54_20495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K9N54_20500 PF00813 FliP family K9N54_20505 PF01313 Bacterial export proteins, family 3 K9N54_20510 PF01311 Bacterial export proteins, family 1 K9N54_20515 PF01312 FlhB HrpN YscU SpaS Family K9N54_20520 PF00771 FHIPEP family K9N54_20530 PF00669 Bacterial flagellin N-terminal helical region K9N54_20530 PF00700 Bacterial flagellin C-terminal helical region K9N54_20535 PF07196 Flagellin hook IN motif K9N54_20535 PF07195 Flagellar hook-associated protein 2 C-terminus K9N54_20535 PF02465 Flagellar hook-associated protein 2 N-terminus K9N54_20540 PF02561 Flagellar protein FliS K9N54_20555 PF03748 Flagellar basal body-associated protein FliL K9N54_20560 PF04542 Sigma-70 region 2 K9N54_20560 PF04545 Sigma-70, region 4 K9N54_20565 PF01618 MotA/TolQ/ExbB proton channel family K9N54_20570 PF13677 Membrane MotB of proton-channel complex MotA/MotB K9N54_20570 PF00691 OmpA family K9N54_20580 PF08000 Bacterial PH domain K9N54_20600 PF01228 Glycine radical K9N54_20600 PF02901 Pyruvate formate lyase-like K9N54_20605 PF04055 Radical SAM superfamily K9N54_20610 PF00923 Transaldolase/Fructose-6-phosphate aldolase K9N54_20620 PF00583 Acetyltransferase (GNAT) family K9N54_20630 PF07690 Major Facilitator Superfamily K9N54_20635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20635 PF03466 LysR substrate binding domain K9N54_20640 PF00892 EamA-like transporter family K9N54_20660 PF13533 Biotin-lipoyl like K9N54_20670 PF01594 AI-2E family transporter K9N54_20675 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K9N54_20685 PF00970 Oxidoreductase FAD-binding domain K9N54_20685 PF00175 Oxidoreductase NAD-binding domain K9N54_20695 PF09905 DNA-binding protein VF530 K9N54_20700 PF03466 LysR substrate binding domain K9N54_20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20710 PF00881 Nitroreductase family K9N54_20715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K9N54_20715 PF12833 Helix-turn-helix domain K9N54_20720 PF00128 Alpha amylase, catalytic domain K9N54_20720 PF00686 Starch binding domain K9N54_20725 PF00768 D-alanyl-D-alanine carboxypeptidase K9N54_20725 PF07943 Penicillin-binding protein 5, C-terminal domain K9N54_20730 PF00561 alpha/beta hydrolase fold K9N54_20740 PF00581 Rhodanese-like domain K9N54_20740 PF17773 UPF0176 acylphosphatase like domain K9N54_20745 PF18416 N-acetylglucosamine binding protein domain 2 K9N54_20745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading K9N54_20750 PF01734 Patatin-like phospholipase K9N54_20755 PF01914 MarC family integral membrane protein K9N54_20760 PF00881 Nitroreductase family K9N54_20765 PF02563 Polysaccharide biosynthesis/export protein K9N54_20765 PF10531 SLBB domain K9N54_20765 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K9N54_20770 PF01451 Low molecular weight phosphotyrosine protein phosphatase K9N54_20775 PF13807 G-rich domain on putative tyrosine kinase K9N54_20775 PF13614 AAA domain K9N54_20775 PF02706 Chain length determinant protein K9N54_20785 PF08803 Putative mono-oxygenase ydhR K9N54_20790 PF03466 LysR substrate binding domain K9N54_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_20800 PF00375 Sodium:dicarboxylate symporter family K9N54_20805 PF06803 Protein of unknown function (DUF1232) K9N54_20810 PF01546 Peptidase family M20/M25/M40 K9N54_20810 PF07687 Peptidase dimerisation domain K9N54_20815 PF07670 Nucleoside recognition K9N54_20820 PF07670 Nucleoside recognition K9N54_20830 PF00128 Alpha amylase, catalytic domain K9N54_20835 PF00912 Transglycosylase K9N54_20840 PF00128 Alpha amylase, catalytic domain K9N54_20840 PF02806 Alpha amylase, C-terminal all-beta domain K9N54_20840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K9N54_20845 PF02446 4-alpha-glucanotransferase K9N54_20850 PF00343 Carbohydrate phosphorylase K9N54_20855 PF17874 MalT-like TPR region K9N54_20855 PF00196 Bacterial regulatory proteins, luxR family K9N54_20870 PF02630 SCO1/SenC K9N54_20880 PF02378 Phosphotransferase system, EIIC K9N54_20880 PF00367 phosphotransferase system, EIIB K9N54_20885 PF03193 RsgA GTPase K9N54_20890 PF00375 Sodium:dicarboxylate symporter family K9N54_20900 PF08543 Phosphomethylpyrimidine kinase K9N54_20910 PF13520 Amino acid permease K9N54_20915 PF01276 Orn/Lys/Arg decarboxylase, major domain K9N54_20915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K9N54_20915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K9N54_20930 PF18494 Pullulanase Ins domain K9N54_20930 PF03714 Bacterial pullanase-associated domain K9N54_20930 PF17967 Pullulanase N2 domain K9N54_20930 PF11852 Domain of unknown function (DUF3372) K9N54_20930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K9N54_20935 PF04231 Endonuclease I K9N54_20940 PF16657 Maltogenic Amylase, C-terminal domain K9N54_20940 PF02903 Alpha amylase, N-terminal ig-like domain K9N54_20940 PF00128 Alpha amylase, catalytic domain K9N54_20955 PF02264 LamB porin K9N54_20960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K9N54_20960 PF00128 Alpha amylase, catalytic domain K9N54_20970 PF07690 Major Facilitator Superfamily K9N54_20980 PF04225 Opacity-associated protein A LysM-like domain K9N54_20980 PF01551 Peptidase family M23 K9N54_20990 PF05193 Peptidase M16 inactive domain K9N54_20990 PF00675 Insulinase (Peptidase family M16) K9N54_20995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_20995 PF17200 Single Cache domain 2 K9N54_20995 PF00672 HAMP domain K9N54_21000 PF00005 ABC transporter K9N54_21005 PF01032 FecCD transport family K9N54_21010 PF01032 FecCD transport family K9N54_21015 PF01497 Periplasmic binding protein K9N54_21020 PF07715 TonB-dependent Receptor Plug Domain K9N54_21020 PF07660 Secretin and TonB N terminus short domain K9N54_21020 PF00593 TonB dependent receptor K9N54_21025 PF07715 TonB-dependent Receptor Plug Domain K9N54_21025 PF00593 TonB dependent receptor K9N54_21030 PF02655 ATP-grasp domain K9N54_21030 PF00206 Lyase K9N54_21035 PF04183 IucA / IucC family K9N54_21035 PF06276 Ferric iron reductase FhuF-like transporter K9N54_21040 PF07690 Major Facilitator Superfamily K9N54_21045 PF06276 Ferric iron reductase FhuF-like transporter K9N54_21045 PF04183 IucA / IucC family K9N54_21050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K9N54_21050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K9N54_21055 PF01547 Bacterial extracellular solute-binding protein K9N54_21060 PF08521 Two-component sensor kinase N-terminal K9N54_21060 PF00512 His Kinase A (phospho-acceptor) domain K9N54_21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_21065 PF00486 Transcriptional regulatory protein, C terminal K9N54_21065 PF00072 Response regulator receiver domain K9N54_21070 PF00367 phosphotransferase system, EIIB K9N54_21070 PF02378 Phosphotransferase system, EIIC K9N54_21080 PF01136 Peptidase family U32 K9N54_21085 PF02653 Branched-chain amino acid transport system / permease component K9N54_21090 PF00005 ABC transporter K9N54_21095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K9N54_21100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K9N54_21100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K9N54_21105 PF00596 Class II Aldolase and Adducin N-terminal domain K9N54_21110 PF11762 L-arabinose isomerase C-terminal domain K9N54_21110 PF02610 L-arabinose isomerase K9N54_21120 PF12833 Helix-turn-helix domain K9N54_21120 PF02311 AraC-like ligand binding domain K9N54_21135 PF02566 OsmC-like protein K9N54_21140 PF01047 MarR family K9N54_21145 PF00578 AhpC/TSA family K9N54_21145 PF10417 C-terminal domain of 1-Cys peroxiredoxin K9N54_21150 PF07992 Pyridine nucleotide-disulphide oxidoreductase K9N54_21150 PF13192 Thioredoxin domain K9N54_21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21165 PF03466 LysR substrate binding domain K9N54_21170 PF01965 DJ-1/PfpI family K9N54_21170 PF12833 Helix-turn-helix domain K9N54_21175 PF04542 Sigma-70 region 2 K9N54_21175 PF08281 Sigma-70, region 4 K9N54_21185 PF02743 Cache domain K9N54_21185 PF00672 HAMP domain K9N54_21185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_21190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21190 PF03466 LysR substrate binding domain K9N54_21195 PF11975 Family 4 glycosyl hydrolase C-terminal domain K9N54_21195 PF02056 Family 4 glycosyl hydrolase K9N54_21210 PF03475 3-alpha domain K9N54_21210 PF03473 MOSC domain K9N54_21215 PF00271 Helicase conserved C-terminal domain K9N54_21215 PF00270 DEAD/DEAH box helicase K9N54_21220 PF03786 D-mannonate dehydratase (UxuA) K9N54_21225 PF00392 Bacterial regulatory proteins, gntR family K9N54_21225 PF07729 FCD domain K9N54_21230 PF03480 Bacterial extracellular solute-binding protein, family 7 K9N54_21235 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K9N54_21240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K9N54_21245 PF08125 Mannitol dehydrogenase C-terminal domain K9N54_21245 PF01232 Mannitol dehydrogenase Rossmann domain K9N54_21250 PF02614 Glucuronate isomerase K9N54_21255 PF00294 pfkB family carbohydrate kinase K9N54_21260 PF01081 KDPG and KHG aldolase K9N54_21265 PF10688 Bacterial inner membrane protein K9N54_21280 PF12833 Helix-turn-helix domain K9N54_21280 PF06719 AraC-type transcriptional regulator N-terminus K9N54_21290 PF00664 ABC transporter transmembrane region K9N54_21290 PF00005 ABC transporter K9N54_21300 PF01037 Lrp/AsnC ligand binding domain K9N54_21335 PF00474 Sodium:solute symporter family K9N54_21345 PF00171 Aldehyde dehydrogenase family K9N54_21345 PF01619 Proline dehydrogenase K9N54_21345 PF14850 DNA-binding domain of Proline dehydrogenase K9N54_21345 PF18327 Proline utilization A proline dehydrogenase N-terminal domain K9N54_21350 PF12833 Helix-turn-helix domain K9N54_21360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K9N54_21360 PF01243 Pyridoxamine 5'-phosphate oxidase K9N54_21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_21365 PF02743 Cache domain K9N54_21365 PF00512 His Kinase A (phospho-acceptor) domain K9N54_21370 PF00072 Response regulator receiver domain K9N54_21370 PF02954 Bacterial regulatory protein, Fis family K9N54_21370 PF00158 Sigma-54 interaction domain K9N54_21375 PF00529 HlyD membrane-fusion protein of T1SS K9N54_21390 PF03412 Peptidase C39 family K9N54_21390 PF00005 ABC transporter K9N54_21390 PF00664 ABC transporter transmembrane region K9N54_21400 PF03358 NADPH-dependent FMN reductase K9N54_21405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K9N54_21410 PF00246 Zinc carboxypeptidase K9N54_21415 PF01380 SIS domain K9N54_21415 PF01418 Helix-turn-helix domain, rpiR family K9N54_21420 PF01380 SIS domain K9N54_21425 PF00367 phosphotransferase system, EIIB K9N54_21425 PF02378 Phosphotransferase system, EIIC K9N54_21430 PF00267 Gram-negative porin K9N54_21435 PF03575 Peptidase family S51 K9N54_21440 PF03466 LysR substrate binding domain K9N54_21440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21445 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_21455 PF05127 Helicase K9N54_21455 PF13718 GNAT acetyltransferase 2 K9N54_21460 PF02195 ParB-like nuclease domain K9N54_21460 PF08775 ParB family K9N54_21465 PF18607 ParA helix turn helix domain K9N54_21465 PF13614 AAA domain K9N54_21480 PF00005 ABC transporter K9N54_21480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_21485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K9N54_21485 PF00005 ABC transporter K9N54_21495 PF08719 Domain of unknown function (DUF1768) K9N54_21495 PF00925 GTP cyclohydrolase II K9N54_21505 PF00072 Response regulator receiver domain K9N54_21505 PF01627 Hpt domain K9N54_21505 PF17149 Periplasmic sensor domain found in signal transduction proteins K9N54_21505 PF00512 His Kinase A (phospho-acceptor) domain K9N54_21505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_21505 PF00672 HAMP domain K9N54_21515 PF01709 Transcriptional regulator K9N54_21520 PF01098 Cell cycle protein K9N54_21530 PF00005 ABC transporter K9N54_21550 PF07694 5TMR of 5TMR-LYT K9N54_21550 PF13492 GAF domain K9N54_21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_21550 PF06580 Histidine kinase K9N54_21555 PF04397 LytTr DNA-binding domain K9N54_21555 PF00072 Response regulator receiver domain K9N54_21565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K9N54_21570 PF17200 Single Cache domain 2 K9N54_21570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_21570 PF00672 HAMP domain K9N54_21585 PF00132 Bacterial transferase hexapeptide (six repeats) K9N54_21590 PF03616 Sodium/glutamate symporter K9N54_21600 PF00005 ABC transporter K9N54_21605 PF00155 Aminotransferase class I and II K9N54_21605 PF00392 Bacterial regulatory proteins, gntR family K9N54_21610 PF03616 Sodium/glutamate symporter K9N54_21620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K9N54_21635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21635 PF03466 LysR substrate binding domain K9N54_21640 PF02678 Pirin K9N54_21640 PF17954 Quercetinase C-terminal cupin domain K9N54_21645 PF07681 DoxX K9N54_21655 PF00730 HhH-GPD superfamily base excision DNA repair protein K9N54_21655 PF06029 AlkA N-terminal domain K9N54_21660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K9N54_21660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K9N54_21670 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K9N54_21680 PF03600 Citrate transporter K9N54_21700 PF00704 Glycosyl hydrolases family 18 K9N54_21700 PF08329 Chitinase A, N-terminal domain K9N54_21710 PF06865 Pyrimidine/purine nucleoside phosphorylase K9N54_21720 PF00563 EAL domain K9N54_21720 PF00990 Diguanylate cyclase, GGDEF domain K9N54_21725 PF01554 MatE K9N54_21730 PF00849 RNA pseudouridylate synthase K9N54_21745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21745 PF03466 LysR substrate binding domain K9N54_21760 PF00990 Diguanylate cyclase, GGDEF domain K9N54_21760 PF17152 Periplasmic sensor domain K9N54_21770 PF00756 Putative esterase K9N54_21775 PF00107 Zinc-binding dehydrogenase K9N54_21775 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_21780 PF00797 N-acetyltransferase K9N54_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21785 PF03466 LysR substrate binding domain K9N54_21800 PF01614 Bacterial transcriptional regulator K9N54_21800 PF09339 IclR helix-turn-helix domain K9N54_21810 PF10688 Bacterial inner membrane protein K9N54_21815 PF07883 Cupin domain K9N54_21830 PF00294 pfkB family carbohydrate kinase K9N54_21835 PF01081 KDPG and KHG aldolase K9N54_21850 PF13229 Right handed beta helix region K9N54_21855 PF00474 Sodium:solute symporter family K9N54_21860 PF14583 Oligogalacturonate lyase K9N54_21865 PF08021 Siderophore-interacting FAD-binding domain K9N54_21865 PF04954 Siderophore-interacting protein K9N54_21870 PF01810 LysE type translocator K9N54_21875 PF01037 Lrp/AsnC ligand binding domain K9N54_21880 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading K9N54_21880 PF18416 N-acetylglucosamine binding protein domain 2 K9N54_21895 PF13599 Pentapeptide repeats (9 copies) K9N54_21900 PF03922 OmpW family K9N54_21905 PF13533 Biotin-lipoyl like K9N54_21910 PF07690 Major Facilitator Superfamily K9N54_21920 PF12706 Beta-lactamase superfamily domain K9N54_21930 PF01204 Trehalase K9N54_21935 PF01661 Macro domain K9N54_21940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_21945 PF03466 LysR substrate binding domain K9N54_21945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21955 PF03466 LysR substrate binding domain K9N54_21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_21970 PF13419 Haloacid dehalogenase-like hydrolase K9N54_21995 PF05651 Putative sugar diacid recognition K9N54_21995 PF17853 GGDEF-like domain K9N54_21995 PF13556 PucR C-terminal helix-turn-helix domain K9N54_22000 PF02447 GntP family permease K9N54_22005 PF02595 Glycerate kinase family K9N54_22010 PF00155 Aminotransferase class I and II K9N54_22010 PF00392 Bacterial regulatory proteins, gntR family K9N54_22030 PF00583 Acetyltransferase (GNAT) family K9N54_22035 PF13344 Haloacid dehalogenase-like hydrolase K9N54_22055 PF03264 NapC/NirT cytochrome c family, N-terminal region K9N54_22060 PF00384 Molybdopterin oxidoreductase K9N54_22060 PF18364 Molybdopterin oxidoreductase N-terminal domain K9N54_22060 PF01568 Molydopterin dinucleotide binding domain K9N54_22070 PF02581 Thiamine monophosphate synthase K9N54_22075 PF02110 Hydroxyethylthiazole kinase family K9N54_22080 PF03070 TENA/THI-4/PQQC family K9N54_22085 PF09084 NMT1/THI5 like K9N54_22090 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_22095 PF00005 ABC transporter K9N54_22100 PF08543 Phosphomethylpyrimidine kinase K9N54_22105 PF01523 Putative modulator of DNA gyrase K9N54_22110 PF01523 Putative modulator of DNA gyrase K9N54_22115 PF04013 Putative SAM-dependent RNA methyltransferase K9N54_22165 PF10928 Protein of unknown function (DUF2810) K9N54_22170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K9N54_22170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K9N54_22180 PF03009 Glycerophosphoryl diester phosphodiesterase family K9N54_22185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K9N54_22185 PF00056 lactate/malate dehydrogenase, NAD binding domain K9N54_22190 PF00072 Response regulator receiver domain K9N54_22190 PF00486 Transcriptional regulatory protein, C terminal K9N54_22195 PF00672 HAMP domain K9N54_22195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_22195 PF16750 Sensor domain of 2-component histidine kinase K9N54_22195 PF00512 His Kinase A (phospho-acceptor) domain K9N54_22200 PF07715 TonB-dependent Receptor Plug Domain K9N54_22200 PF00593 TonB dependent receptor K9N54_22210 PF01618 MotA/TolQ/ExbB proton channel family K9N54_22215 PF01618 MotA/TolQ/ExbB proton channel family K9N54_22220 PF02472 Biopolymer transport protein ExbD/TolR K9N54_22260 PF01297 Zinc-uptake complex component A periplasmic K9N54_22265 PF00005 ABC transporter K9N54_22270 PF00950 ABC 3 transport family K9N54_22285 PF00326 Prolyl oligopeptidase family K9N54_22285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K9N54_22290 PF07690 Major Facilitator Superfamily K9N54_22295 PF00491 Arginase family K9N54_22300 PF17944 Arginine decarboxylase C-terminal helical extension K9N54_22300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K9N54_22300 PF17810 Arginine decarboxylase helical bundle domain K9N54_22305 PF00753 Metallo-beta-lactamase superfamily K9N54_22310 PF18030 RimK PreATP-grasp domain K9N54_22310 PF08443 RimK-like ATP-grasp domain K9N54_22315 PF18030 RimK PreATP-grasp domain K9N54_22315 PF08443 RimK-like ATP-grasp domain K9N54_22320 PF03466 LysR substrate binding domain K9N54_22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_22345 PF00232 Glycosyl hydrolase family 1 K9N54_22350 PF00512 His Kinase A (phospho-acceptor) domain K9N54_22350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_22350 PF02743 Cache domain K9N54_22355 PF02954 Bacterial regulatory protein, Fis family K9N54_22355 PF00072 Response regulator receiver domain K9N54_22355 PF00158 Sigma-54 interaction domain K9N54_22360 PF00990 Diguanylate cyclase, GGDEF domain K9N54_22360 PF08448 PAS fold K9N54_22365 PF05525 Branched-chain amino acid transport protein K9N54_22380 PF01266 FAD dependent oxidoreductase K9N54_22390 PF01212 Beta-eliminating lyase K9N54_22405 PF01773 Na+ dependent nucleoside transporter N-terminus K9N54_22405 PF07662 Na+ dependent nucleoside transporter C-terminus K9N54_22405 PF07670 Nucleoside recognition K9N54_22415 PF13532 2OG-Fe(II) oxygenase superfamily K9N54_22420 PF00990 Diguanylate cyclase, GGDEF domain K9N54_22420 PF05230 MASE2 domain K9N54_22425 PF12729 Four helix bundle sensory module for signal transduction K9N54_22425 PF00672 HAMP domain K9N54_22425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_22440 PF00990 Diguanylate cyclase, GGDEF domain K9N54_22445 PF03441 FAD binding domain of DNA photolyase K9N54_22445 PF00875 DNA photolyase K9N54_22450 PF04244 Deoxyribodipyrimidine photo-lyase-related protein K9N54_22465 PF01641 SelR domain K9N54_22465 PF01625 Peptide methionine sulfoxide reductase K9N54_22470 PF02566 OsmC-like protein K9N54_22475 PF12464 Maltose acetyltransferase K9N54_22475 PF14602 Hexapeptide repeat of succinyl-transferase K9N54_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_22510 PF03466 LysR substrate binding domain K9N54_22515 PF13419 Haloacid dehalogenase-like hydrolase K9N54_22530 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K9N54_22535 PF00194 Eukaryotic-type carbonic anhydrase K9N54_22540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K9N54_22545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K9N54_22550 PF02687 FtsX-like permease family K9N54_22550 PF12704 MacB-like periplasmic core domain K9N54_22550 PF00005 ABC transporter K9N54_22555 PF02321 Outer membrane efflux protein K9N54_22560 PF00657 GDSL-like Lipase/Acylhydrolase K9N54_22565 PF05922 Peptidase inhibitor I9 K9N54_22565 PF00082 Subtilase family K9N54_22575 PF03611 PTS system sugar-specific permease component K9N54_22585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_22590 PF00356 Bacterial regulatory proteins, lacI family K9N54_22595 PF13419 Haloacid dehalogenase-like hydrolase K9N54_22600 PF00202 Aminotransferase class-III K9N54_22605 PF00266 Aminotransferase class-V K9N54_22640 PF09077 Mu B transposition protein, C terminal K9N54_22640 PF13401 AAA domain K9N54_22665 PF04245 37-kD nucleoid-associated bacterial protein K9N54_22690 PF02810 SEC-C motif K9N54_22855 PF01555 DNA methylase K9N54_22885 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_22890 PF07702 UTRA domain K9N54_22890 PF00392 Bacterial regulatory proteins, gntR family K9N54_22905 PF04393 Protein of unknown function (DUF535) K9N54_22910 PF01266 FAD dependent oxidoreductase K9N54_22915 PF18027 Cytosolic carboxypeptidase N-terminal domain K9N54_22915 PF00246 Zinc carboxypeptidase K9N54_22920 PF00691 OmpA family K9N54_22920 PF01389 OmpA-like transmembrane domain K9N54_22925 PF03466 LysR substrate binding domain K9N54_22925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_22935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_22935 PF03466 LysR substrate binding domain K9N54_22950 PF03315 Serine dehydratase beta chain K9N54_22950 PF03313 Serine dehydratase alpha chain K9N54_22970 PF00133 tRNA synthetases class I (I, L, M and V) K9N54_22970 PF08264 Anticodon-binding domain of tRNA K9N54_22975 PF01464 Transglycosylase SLT domain K9N54_22995 PF00460 Flagella basal body rod protein K9N54_23000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_23000 PF00460 Flagella basal body rod protein K9N54_23005 PF13860 FlgD Ig-like domain K9N54_23005 PF13861 FlgD Tudor-like domain K9N54_23005 PF03963 Flagellar hook capping protein - N-terminal region K9N54_23010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_23010 PF00460 Flagella basal body rod protein K9N54_23010 PF07559 Flagellar basal body protein FlaE K9N54_23015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_23015 PF00460 Flagella basal body rod protein K9N54_23020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_23020 PF00460 Flagella basal body rod protein K9N54_23025 PF02107 Flagellar L-ring protein K9N54_23030 PF02119 Flagellar P-ring protein K9N54_23035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K9N54_23035 PF10135 Rod binding protein K9N54_23040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K9N54_23040 PF00460 Flagella basal body rod protein K9N54_23045 PF00669 Bacterial flagellin N-terminal helical region K9N54_23065 PF01070 FMN-dependent dehydrogenase K9N54_23090 PF00581 Rhodanese-like domain K9N54_23095 PF00166 Chaperonin 10 Kd subunit K9N54_23100 PF00118 TCP-1/cpn60 chaperonin family K9N54_23115 PF01810 LysE type translocator K9N54_23120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23120 PF03466 LysR substrate binding domain K9N54_23135 PF08359 YsiA-like protein, C-terminal region K9N54_23135 PF00440 Bacterial regulatory proteins, tetR family K9N54_23145 PF00149 Calcineurin-like phosphoesterase K9N54_23145 PF02872 5'-nucleotidase, C-terminal domain K9N54_23150 PF03060 Nitronate monooxygenase K9N54_23155 PF17678 Glycosyl hydrolase family 92 N-terminal domain K9N54_23155 PF07971 Glycosyl hydrolase family 92 K9N54_23165 PF07971 Glycosyl hydrolase family 92 K9N54_23165 PF17678 Glycosyl hydrolase family 92 N-terminal domain K9N54_23170 PF07971 Glycosyl hydrolase family 92 K9N54_23170 PF17678 Glycosyl hydrolase family 92 N-terminal domain K9N54_23190 PF01625 Peptide methionine sulfoxide reductase K9N54_23190 PF01641 SelR domain K9N54_23200 PF08220 DeoR-like helix-turn-helix domain K9N54_23200 PF00455 DeoR C terminal sensor domain K9N54_23210 PF06628 Catalase-related immune-responsive K9N54_23210 PF00199 Catalase K9N54_23220 PF00857 Isochorismatase family K9N54_23230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain K9N54_23230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family K9N54_23255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23255 PF03466 LysR substrate binding domain K9N54_23260 PF01389 OmpA-like transmembrane domain K9N54_23260 PF00691 OmpA family K9N54_23270 PF06629 MltA-interacting protein MipA K9N54_23275 PF17185 NlpE C-terminal OB domain K9N54_23275 PF04170 NlpE N-terminal domain K9N54_23280 PF02001 Protein of unknown function DUF134 K9N54_23305 PF03144 Elongation factor Tu domain 2 K9N54_23305 PF14492 Elongation Factor G, domain II K9N54_23305 PF00679 Elongation factor G C-terminus K9N54_23305 PF03764 Elongation factor G, domain IV K9N54_23305 PF00009 Elongation factor Tu GTP binding domain K9N54_23310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K9N54_23310 PF13378 Enolase C-terminal domain-like K9N54_23320 PF03466 LysR substrate binding domain K9N54_23320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23330 PF09278 MerR, DNA binding K9N54_23330 PF00376 MerR family regulatory protein K9N54_23355 PF13091 PLD-like domain K9N54_23360 PF13533 Biotin-lipoyl like K9N54_23365 PF00873 AcrB/AcrD/AcrF family K9N54_23390 PF08402 TOBE domain K9N54_23390 PF00005 ABC transporter K9N54_23415 PF00392 Bacterial regulatory proteins, gntR family K9N54_23415 PF07702 UTRA domain K9N54_23420 PF02028 BCCT, betaine/carnitine/choline family transporter K9N54_23425 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 K9N54_23425 PF00703 Glycosyl hydrolases family 2 K9N54_23425 PF02837 Glycosyl hydrolases family 2, sugar binding domain K9N54_23425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain K9N54_23430 PF00196 Bacterial regulatory proteins, luxR family K9N54_23440 PF07694 5TMR of 5TMR-LYT K9N54_23440 PF00990 Diguanylate cyclase, GGDEF domain K9N54_23455 PF00873 AcrB/AcrD/AcrF family K9N54_23460 PF13533 Biotin-lipoyl like K9N54_23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23465 PF03466 LysR substrate binding domain K9N54_23475 PF13416 Bacterial extracellular solute-binding protein K9N54_23480 PF00579 tRNA synthetases class I (W and Y) K9N54_23495 PF00391 PEP-utilising enzyme, mobile domain K9N54_23495 PF02896 PEP-utilising enzyme, TIM barrel domain K9N54_23495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K9N54_23500 PF03618 Kinase/pyrophosphorylase K9N54_23505 PF00710 Asparaginase, N-terminal K9N54_23505 PF17763 Glutaminase/Asparaginase C-terminal domain K9N54_23510 PF00709 Adenylosuccinate synthetase K9N54_23515 PF03466 LysR substrate binding domain K9N54_23515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23530 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) K9N54_23535 PF12833 Helix-turn-helix domain K9N54_23535 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K9N54_23550 PF00107 Zinc-binding dehydrogenase K9N54_23550 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_23555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K9N54_23565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23565 PF03466 LysR substrate binding domain K9N54_23570 PF03466 LysR substrate binding domain K9N54_23570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23580 PF00270 DEAD/DEAH box helicase K9N54_23580 PF00271 Helicase conserved C-terminal domain K9N54_23620 PF00155 Aminotransferase class I and II K9N54_23625 PF12833 Helix-turn-helix domain K9N54_23625 PF01497 Periplasmic binding protein K9N54_23655 PF05661 Protein of unknown function (DUF808) K9N54_23660 PF01979 Amidohydrolase family K9N54_23665 PF01679 Proteolipid membrane potential modulator K9N54_23670 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_23670 PF03473 MOSC domain K9N54_23670 PF03476 MOSC N-terminal beta barrel domain K9N54_23670 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_23670 PF03473 MOSC domain K9N54_23670 PF03476 MOSC N-terminal beta barrel domain K9N54_23675 PF02540 NAD synthase K9N54_23680 PF01467 Cytidylyltransferase-like K9N54_23720 PF00005 ABC transporter K9N54_23725 PF01032 FecCD transport family K9N54_23735 PF02472 Biopolymer transport protein ExbD/TolR K9N54_23740 PF01618 MotA/TolQ/ExbB proton channel family K9N54_23745 PF03544 Gram-negative bacterial TonB protein C-terminal K9N54_23750 PF04055 Radical SAM superfamily K9N54_23755 PF06228 Haem utilisation ChuX/HutX K9N54_23760 PF01243 Pyridoxamine 5'-phosphate oxidase K9N54_23770 PF01584 CheW-like domain K9N54_23770 PF00072 Response regulator receiver domain K9N54_23785 PF13091 PLD-like domain K9N54_23785 PF13087 AAA domain K9N54_23790 PF00082 Subtilase family K9N54_23810 PF00141 Peroxidase K9N54_23815 PF00210 Ferritin-like domain K9N54_23820 PF03466 LysR substrate binding domain K9N54_23820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_23835 PF01752 Collagenase K9N54_23835 PF08453 Peptidase family M9 N-terminal K9N54_23835 PF04151 Bacterial pre-peptidase C-terminal domain K9N54_23845 PF00128 Alpha amylase, catalytic domain K9N54_23860 PF02254 TrkA-N domain K9N54_23860 PF00999 Sodium/hydrogen exchanger family K9N54_23865 PF02525 Flavodoxin-like fold K9N54_23870 PF00582 Universal stress protein family K9N54_23875 PF00005 ABC transporter K9N54_23875 PF16326 ABC transporter C-terminal domain K9N54_23875 PF12848 ABC transporter K9N54_23880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K9N54_23880 PF00326 Prolyl oligopeptidase family K9N54_23890 PF13533 Biotin-lipoyl like K9N54_23895 PF00873 AcrB/AcrD/AcrF family K9N54_23900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K9N54_23910 PF13302 Acetyltransferase (GNAT) domain K9N54_23920 PF00990 Diguanylate cyclase, GGDEF domain K9N54_23930 PF00111 2Fe-2S iron-sulfur cluster binding domain K9N54_23930 PF00175 Oxidoreductase NAD-binding domain K9N54_23930 PF00970 Oxidoreductase FAD-binding domain K9N54_23940 PF00873 AcrB/AcrD/AcrF family K9N54_23960 PF12838 4Fe-4S dicluster domain K9N54_23960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K9N54_23960 PF00384 Molybdopterin oxidoreductase K9N54_23960 PF01568 Molydopterin dinucleotide binding domain K9N54_23960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K9N54_23980 PF00005 ABC transporter K9N54_23990 PF00672 HAMP domain K9N54_23990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_23990 PF17200 Single Cache domain 2 K9N54_23995 PF10282 Lactonase, 7-bladed beta-propeller K9N54_24000 PF02567 Phenazine biosynthesis-like protein K9N54_24005 PF01161 Phosphatidylethanolamine-binding protein K9N54_24015 PF01758 Sodium Bile acid symporter family K9N54_24030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K9N54_24035 PF02378 Phosphotransferase system, EIIC K9N54_24035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K9N54_24040 PF08240 Alcohol dehydrogenase GroES-like domain K9N54_24040 PF00107 Zinc-binding dehydrogenase K9N54_24075 PF03222 Tryptophan/tyrosine permease family K9N54_24085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_24085 PF00672 HAMP domain K9N54_24085 PF02743 Cache domain K9N54_24090 PF07670 Nucleoside recognition K9N54_24110 PF01551 Peptidase family M23 K9N54_24110 PF08525 Opacity-associated protein A N-terminal motif K9N54_24110 PF01476 LysM domain K9N54_24115 PF00563 EAL domain K9N54_24115 PF00990 Diguanylate cyclase, GGDEF domain K9N54_24115 PF08447 PAS fold K9N54_24115 PF08448 PAS fold K9N54_24120 PF03466 LysR substrate binding domain K9N54_24120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24125 PF07690 Major Facilitator Superfamily K9N54_24135 PF00462 Glutaredoxin K9N54_24140 PF00892 EamA-like transporter family K9N54_24145 PF00267 Gram-negative porin K9N54_24155 PF01557 Fumarylacetoacetate (FAA) hydrolase family K9N54_24170 PF12833 Helix-turn-helix domain K9N54_24175 PF01810 LysE type translocator K9N54_24185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K9N54_24185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K9N54_24185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K9N54_24185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K9N54_24190 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K9N54_24190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K9N54_24195 PF00115 Cytochrome C and Quinol oxidase polypeptide I K9N54_24200 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K9N54_24205 PF00510 Cytochrome c oxidase subunit III K9N54_24225 PF02628 Cytochrome oxidase assembly protein K9N54_24230 PF01040 UbiA prenyltransferase family K9N54_24235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K9N54_24235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K9N54_24265 PF00313 'Cold-shock' DNA-binding domain K9N54_24270 PF03889 Alternative ribosome-rescue factor A K9N54_24275 PF08447 PAS fold K9N54_24275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_24275 PF13426 PAS domain K9N54_24280 PF00990 Diguanylate cyclase, GGDEF domain K9N54_24295 PF00005 ABC transporter K9N54_24295 PF02687 FtsX-like permease family K9N54_24295 PF12704 MacB-like periplasmic core domain K9N54_24300 PF00005 ABC transporter K9N54_24300 PF02687 FtsX-like permease family K9N54_24300 PF12704 MacB-like periplasmic core domain K9N54_24310 PF00672 HAMP domain K9N54_24310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_24310 PF17200 Single Cache domain 2 K9N54_24315 PF00210 Ferritin-like domain K9N54_24325 PF07995 Glucose / Sorbosone dehydrogenase K9N54_24330 PF00465 Iron-containing alcohol dehydrogenase K9N54_24345 PF00892 EamA-like transporter family K9N54_24370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24370 PF03466 LysR substrate binding domain K9N54_24380 PF00501 AMP-binding enzyme K9N54_24380 PF13193 AMP-binding enzyme C-terminal domain K9N54_24385 PF00351 Biopterin-dependent aromatic amino acid hydroxylase K9N54_24390 PF01329 Pterin 4 alpha carbinolamine dehydratase K9N54_24410 PF12843 Putative quorum-sensing-regulated virulence factor K9N54_24415 PF00270 DEAD/DEAH box helicase K9N54_24415 PF00271 Helicase conserved C-terminal domain K9N54_24420 PF09905 DNA-binding protein VF530 K9N54_24425 PF00291 Pyridoxal-phosphate dependent enzyme K9N54_24435 PF01470 Pyroglutamyl peptidase K9N54_24445 PF07683 Cobalamin synthesis protein cobW C-terminal domain K9N54_24445 PF02492 CobW/HypB/UreG, nucleotide-binding domain K9N54_24450 PF00270 DEAD/DEAH box helicase K9N54_24450 PF00271 Helicase conserved C-terminal domain K9N54_24470 PF12792 CSS motif domain associated with EAL K9N54_24470 PF00563 EAL domain K9N54_24475 PF00005 ABC transporter K9N54_24480 PF12729 Four helix bundle sensory module for signal transduction K9N54_24480 PF00672 HAMP domain K9N54_24480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_24490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24490 PF03466 LysR substrate binding domain K9N54_24495 PF00884 Sulfatase K9N54_24500 PF04055 Radical SAM superfamily K9N54_24500 PF13186 Iron-sulfur cluster-binding domain K9N54_24505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24505 PF03466 LysR substrate binding domain K9N54_24515 PF01575 MaoC like domain K9N54_24520 PF12849 PBP superfamily domain K9N54_24530 PF12833 Helix-turn-helix domain K9N54_24535 PF08206 Ribonuclease B OB domain K9N54_24535 PF00773 RNB domain K9N54_24535 PF00575 S1 RNA binding domain K9N54_24540 PF03880 DbpA RNA binding domain K9N54_24540 PF00270 DEAD/DEAH box helicase K9N54_24540 PF00271 Helicase conserved C-terminal domain K9N54_24545 PF13426 PAS domain K9N54_24545 PF00990 Diguanylate cyclase, GGDEF domain K9N54_24545 PF00563 EAL domain K9N54_24550 PF00871 Acetokinase family K9N54_24555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K9N54_24555 PF13426 PAS domain K9N54_24555 PF08447 PAS fold K9N54_24565 PF10063 Uncharacterized integral membrane protein (DUF2301) K9N54_24570 PF00682 HMGL-like K9N54_24575 PF00378 Enoyl-CoA hydratase/isomerase K9N54_24580 PF01039 Carboxyl transferase domain K9N54_24585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_24585 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_24585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_24590 PF00376 MerR family regulatory protein K9N54_24590 PF09278 MerR, DNA binding K9N54_24595 PF02803 Thiolase, C-terminal domain K9N54_24595 PF00108 Thiolase, N-terminal domain K9N54_24600 PF00171 Aldehyde dehydrogenase family K9N54_24605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K9N54_24605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K9N54_24605 PF02770 Acyl-CoA dehydrogenase, middle domain K9N54_24610 PF00378 Enoyl-CoA hydratase/isomerase K9N54_24615 PF00378 Enoyl-CoA hydratase/isomerase K9N54_24620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K9N54_24620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K9N54_24630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K9N54_24630 PF06481 COX Aromatic Rich Motif K9N54_24635 PF00115 Cytochrome C and Quinol oxidase polypeptide I K9N54_24640 PF00510 Cytochrome c oxidase subunit III K9N54_24650 PF01040 UbiA prenyltransferase family K9N54_24660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K9N54_24665 PF01565 FAD binding domain K9N54_24665 PF08031 Berberine and berberine like K9N54_24670 PF03466 LysR substrate binding domain K9N54_24670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24685 PF03466 LysR substrate binding domain K9N54_24685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24690 PF00005 ABC transporter K9N54_24695 PF00497 Bacterial extracellular solute-binding proteins, family 3 K9N54_24700 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_24705 PF00528 Binding-protein-dependent transport system inner membrane component K9N54_24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24715 PF03466 LysR substrate binding domain K9N54_24720 PF02798 Glutathione S-transferase, N-terminal domain K9N54_24720 PF00043 Glutathione S-transferase, C-terminal domain K9N54_24730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K9N54_24730 PF00364 Biotin-requiring enzyme K9N54_24730 PF02817 e3 binding domain K9N54_24735 PF02779 Transketolase, pyrimidine binding domain K9N54_24735 PF02780 Transketolase, C-terminal domain K9N54_24740 PF00676 Dehydrogenase E1 component K9N54_24755 PF00012 Hsp70 protein K9N54_24760 PF04314 Copper chaperone PCu(A)C K9N54_24780 PF01497 Periplasmic binding protein K9N54_24785 PF01032 FecCD transport family K9N54_24790 PF01032 FecCD transport family K9N54_24795 PF00005 ABC transporter K9N54_24800 PF13411 MerR HTH family regulatory protein K9N54_24810 PF00593 TonB dependent receptor K9N54_24810 PF07715 TonB-dependent Receptor Plug Domain K9N54_24840 PF12805 FUSC-like inner membrane protein yccS K9N54_24845 PF12462 DNA helicase IV / RNA helicase N terminal K9N54_24845 PF00580 UvrD/REP helicase N-terminal domain K9N54_24845 PF13361 UvrD-like helicase C-terminal domain K9N54_24850 PF02142 MGS-like domain K9N54_24855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K9N54_24860 PF00512 His Kinase A (phospho-acceptor) domain K9N54_24860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_24860 PF00672 HAMP domain K9N54_24860 PF00072 Response regulator receiver domain K9N54_24860 PF01627 Hpt domain K9N54_24875 PF00072 Response regulator receiver domain K9N54_24875 PF00486 Transcriptional regulatory protein, C terminal K9N54_24880 PF16385 Domain of unknown function K9N54_24880 PF00884 Sulfatase K9N54_24885 PF00884 Sulfatase K9N54_24895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24895 PF03466 LysR substrate binding domain K9N54_24900 PF00884 Sulfatase K9N54_24905 PF13186 Iron-sulfur cluster-binding domain K9N54_24905 PF04055 Radical SAM superfamily K9N54_24910 PF17863 AAA lid domain K9N54_24910 PF07726 ATPase family associated with various cellular activities (AAA) K9N54_24925 PF00092 von Willebrand factor type A domain K9N54_24940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K9N54_24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_24945 PF03466 LysR substrate binding domain K9N54_24950 PF00781 Diacylglycerol kinase catalytic domain K9N54_24955 PF04076 Bacterial OB fold (BOF) protein K9N54_24970 PF13186 Iron-sulfur cluster-binding domain K9N54_24970 PF04055 Radical SAM superfamily K9N54_24980 PF08774 VRR-NUC domain K9N54_24980 PF18081 Fanconi anemia-associated nuclease SAP domain K9N54_24995 PF01435 Peptidase family M48 K9N54_25000 PF04011 LemA family K9N54_25005 PF03606 C4-dicarboxylate anaerobic carrier K9N54_25015 PF00583 Acetyltransferase (GNAT) family K9N54_25015 PF00814 Glycoprotease family K9N54_25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_25025 PF00072 Response regulator receiver domain K9N54_25030 PF00155 Aminotransferase class I and II K9N54_25035 PF01926 50S ribosome-binding GTPase K9N54_25045 PF01752 Collagenase K9N54_25045 PF08453 Peptidase family M9 N-terminal K9N54_25045 PF04151 Bacterial pre-peptidase C-terminal domain K9N54_25055 PF12833 Helix-turn-helix domain K9N54_25060 PF03466 LysR substrate binding domain K9N54_25060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_25080 PF04972 BON domain K9N54_25080 PF00263 Bacterial type II and III secretion system protein K9N54_25080 PF13629 Pilus formation protein N terminal region K9N54_25095 PF00437 Type II/IV secretion system protein K9N54_25130 PF00691 OmpA family K9N54_25130 PF05736 OprF membrane domain K9N54_25140 PF03466 LysR substrate binding domain K9N54_25140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_25145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K9N54_25145 PF03466 LysR substrate binding domain K9N54_25155 PF09456 RcsC Alpha-Beta-Loop (ABL) K9N54_25155 PF00072 Response regulator receiver domain K9N54_25155 PF00512 His Kinase A (phospho-acceptor) domain K9N54_25155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_25160 PF00563 EAL domain K9N54_25160 PF13188 PAS domain K9N54_25160 PF03707 Bacterial signalling protein N terminal repeat K9N54_25160 PF00990 Diguanylate cyclase, GGDEF domain K9N54_25165 PF00072 Response regulator receiver domain K9N54_25165 PF00196 Bacterial regulatory proteins, luxR family K9N54_25170 PF00990 Diguanylate cyclase, GGDEF domain K9N54_25180 PF00072 Response regulator receiver domain K9N54_25180 PF00196 Bacterial regulatory proteins, luxR family K9N54_25200 PF00072 Response regulator receiver domain K9N54_25200 PF01584 CheW-like domain K9N54_25215 PF00892 EamA-like transporter family K9N54_25225 PF01569 PAP2 superfamily K9N54_25235 PF07504 Fungalysin/Thermolysin Propeptide Motif K9N54_25235 PF01447 Thermolysin metallopeptidase, catalytic domain K9N54_25235 PF02868 Thermolysin metallopeptidase, alpha-helical domain K9N54_25235 PF04151 Bacterial pre-peptidase C-terminal domain K9N54_25235 PF03413 Peptidase propeptide and YPEB domain K9N54_25240 PF00893 Small Multidrug Resistance protein K9N54_25245 PF00892 EamA-like transporter family K9N54_25265 PF00171 Aldehyde dehydrogenase family K9N54_25270 PF00939 Sodium:sulfate symporter transmembrane region K9N54_25275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K9N54_25275 PF17203 Single cache domain 3 K9N54_25275 PF00989 PAS fold K9N54_25275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K9N54_25280 PF00072 Response regulator receiver domain K9N54_25280 PF12431 Transcriptional regulator K9N54_25290 PF01645 Conserved region in glutamate synthase K9N54_25290 PF13187 4Fe-4S dicluster domain K9N54_25295 PF00141 Peroxidase K9N54_25300 PF09722 Protein of unknown function (DUF2384) K9N54_25310 PF01757 Acyltransferase family K9N54_25320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K9N54_25325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K9N54_25345 PF00571 CBS domain K9N54_25345 PF03448 MgtE intracellular N domain K9N54_25345 PF01769 Divalent cation transporter K9N54_25395 PF01848 Hok/gef family K9N54_25400 PF10502 Signal peptidase, peptidase S26 K9N54_25410 PF01464 Transglycosylase SLT domain K9N54_25460 PF01131 DNA topoisomerase K9N54_25460 PF01751 Toprim domain K9N54_25480 PF03230 Antirestriction protein K9N54_25490 PF13362 Toprim domain K9N54_25490 PF18818 Metallopeptidase superfamily domain K9N54_25490 PF08401 Domain of unknown function (DUF1738) K9N54_25520 PF02796 Helix-turn-helix domain of resolvase K9N54_25520 PF00239 Resolvase, N terminal domain K9N54_25560 PF03743 Bacterial conjugation TrbI-like protein K9N54_25570 PF03524 Conjugal transfer protein K9N54_25590 PF00437 Type II/IV secretion system protein K9N54_25600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system K9N54_25605 PF05101 Type IV secretory pathway, VirB3-like protein K9N54_25610 PF04956 TrbC/VIRB2 family K9N54_25635 PF00239 Resolvase, N terminal domain K9N54_25635 PF02796 Helix-turn-helix domain of resolvase K9N54_25640 PF13614 AAA domain K9N54_25645 PF02195 ParB-like nuclease domain K9N54_25645 PF08775 ParB family K9N54_25675 PF02368 Bacterial Ig-like domain (group 2) K9N54_25675 PF11999 Protein of unknown function (DUF3494) K9N54_25680 PF00691 OmpA family K9N54_25680 PF01389 OmpA-like transmembrane domain K9N54_25715 PF00691 OmpA family K9N54_25765 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system K9N54_25775 PF02899 Phage integrase, N-terminal SAM-like domain K9N54_25775 PF00589 Phage integrase family K9N54_25795 PF11999 Protein of unknown function (DUF3494) K9N54_25795 PF02368 Bacterial Ig-like domain (group 2) K9N54_25815 PF02954 Bacterial regulatory protein, Fis family K9N54_25830 PF01551 Peptidase family M23 K9N54_25830 PF08525 Opacity-associated protein A N-terminal motif K9N54_25830 PF01476 LysM domain K9N54_25880 PF00691 OmpA family K9N54_25880 PF01389 OmpA-like transmembrane domain K9N54_25935 PF00239 Resolvase, N terminal domain K9N54_25935 PF02796 Helix-turn-helix domain of resolvase K9N54_25975 PF02796 Helix-turn-helix domain of resolvase K9N54_25975 PF00239 Resolvase, N terminal domain K9N54_26010 PF03230 Antirestriction protein K9N54_26085 PF01751 Toprim domain K9N54_26085 PF01131 DNA topoisomerase K9N54_26115 PF08401 Domain of unknown function (DUF1738) K9N54_26115 PF13362 Toprim domain K9N54_26115 PF18818 Metallopeptidase superfamily domain K9N54_26145 PF01848 Hok/gef family K9N54_26170 PF02384 N-6 DNA Methylase K9N54_26170 PF07669 Eco57I restriction-modification methylase K9N54_26175 PF13737 Transposase DDE domain K9N54_26190 PF13737 Transposase DDE domain K9N54_26215 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system K9N54_26240 PF13614 AAA domain K9N54_26245 PF04754 Putative transposase, YhgA-like K9N54_26265 PF04956 TrbC/VIRB2 family K9N54_26270 PF05101 Type IV secretory pathway, VirB3-like protein K9N54_26275 PF03135 CagE, TrbE, VirB family, component of type IV transporter system K9N54_26285 PF00437 Type II/IV secretion system protein K9N54_26300 PF03524 Conjugal transfer protein K9N54_26310 PF03743 Bacterial conjugation TrbI-like protein K9N54_26380 PF01848 Hok/gef family K9N54_26400 PF01464 Transglycosylase SLT domain K9N54_26440 PF07015 VirC1 protein