locus-tag class description Vp2S01_0001 PF00258 Flavodoxin Vp2S01_0002 PF10396 GTP-binding protein TrmE N-terminus Vp2S01_0002 PF12631 MnmE helical domain Vp2S01_0002 PF01926 50S ribosome-binding GTPase Vp2S01_0003 PF14849 YidC periplasmic domain Vp2S01_0003 PF02096 60Kd inner membrane protein Vp2S01_0004 PF00825 Ribonuclease P Vp2S01_0005 PF00468 Ribosomal protein L34 Vp2S01_0006 PF00005 ABC transporter Vp2S01_0007 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_0008 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_0010 PF00308 Bacterial dnaA protein Vp2S01_0010 PF11638 DnaA N-terminal domain Vp2S01_0010 PF08299 Bacterial dnaA protein helix-turn-helix Vp2S01_0011 PF02768 DNA polymerase III beta subunit, C-terminal domain Vp2S01_0011 PF02767 DNA polymerase III beta subunit, central domain Vp2S01_0011 PF00712 DNA polymerase III beta subunit, N-terminal domain Vp2S01_0012 PF02463 RecF/RecN/SMC N terminal domain Vp2S01_0013 PF01751 Toprim domain Vp2S01_0013 PF18053 DNA gyrase B subunit insert domain Vp2S01_0013 PF00986 DNA gyrase B subunit, carboxyl terminus Vp2S01_0013 PF00204 DNA gyrase B Vp2S01_0013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0017 PF00011 Hsp20/alpha crystallin family Vp2S01_0018 PF00155 Aminotransferase class I and II Vp2S01_0019 PF00128 Alpha amylase, catalytic domain Vp2S01_0020 PF02092 Glycyl-tRNA synthetase beta subunit Vp2S01_0020 PF05746 DALR anticodon binding domain Vp2S01_0021 PF02091 Glycyl-tRNA synthetase alpha subunit Vp2S01_0022 PF01169 Uncharacterized protein family UPF0016 Vp2S01_0025 PF01206 Sulfurtransferase TusA Vp2S01_0027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0027 PF03466 LysR substrate binding domain Vp2S01_0028 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_0028 PF00107 Zinc-binding dehydrogenase Vp2S01_0029 PF02803 Thiolase, C-terminal domain Vp2S01_0029 PF00108 Thiolase, N-terminal domain Vp2S01_0030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vp2S01_0030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vp2S01_0030 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_0031 PF01205 Uncharacterized protein family UPF0029 Vp2S01_0031 PF09186 Domain of unknown function (DUF1949) Vp2S01_0032 PF02386 Cation transport protein Vp2S01_0033 PF12724 Flavodoxin domain Vp2S01_0038 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Vp2S01_0039 PF01964 Radical SAM ThiC family Vp2S01_0039 PF13667 ThiC-associated domain Vp2S01_0040 PF02581 Thiamine monophosphate synthase Vp2S01_0041 PF00899 ThiF family Vp2S01_0042 PF02597 ThiS family Vp2S01_0043 PF05690 Thiazole biosynthesis protein ThiG Vp2S01_0044 PF04055 Radical SAM superfamily Vp2S01_0044 PF06968 Biotin and Thiamin Synthesis associated domain Vp2S01_0045 PF00557 Metallopeptidase family M24 Vp2S01_0045 PF01321 Creatinase/Prolidase N-terminal domain Vp2S01_0045 PF00557 Metallopeptidase family M24 Vp2S01_0045 PF01321 Creatinase/Prolidase N-terminal domain Vp2S01_0046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0046 PF03466 LysR substrate binding domain Vp2S01_0047 PF07690 Major Facilitator Superfamily Vp2S01_0051 PF05114 Protein of unknown function (DUF692) Vp2S01_0053 PF13361 UvrD-like helicase C-terminal domain Vp2S01_0053 PF00580 UvrD/REP helicase N-terminal domain Vp2S01_0055 PF01810 LysE type translocator Vp2S01_0057 PF00892 EamA-like transporter family Vp2S01_0058 PF09382 RQC domain Vp2S01_0058 PF00570 HRDC domain Vp2S01_0058 PF00271 Helicase conserved C-terminal domain Vp2S01_0058 PF16124 RecQ zinc-binding Vp2S01_0058 PF00270 DEAD/DEAH box helicase Vp2S01_0060 PF02592 Putative vitamin uptake transporter Vp2S01_0061 PF02541 Ppx/GppA phosphatase family Vp2S01_0062 PF00270 DEAD/DEAH box helicase Vp2S01_0062 PF00271 Helicase conserved C-terminal domain Vp2S01_0063 PF00085 Thioredoxin Vp2S01_0064 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_0064 PF07498 Rho termination factor, N-terminal domain Vp2S01_0064 PF07497 Rho termination factor, RNA-binding domain Vp2S01_0066 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Vp2S01_0067 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_0068 PF00175 Oxidoreductase NAD-binding domain Vp2S01_0073 PF07219 HemY protein N-terminus Vp2S01_0074 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Vp2S01_0075 PF02602 Uroporphyrinogen-III synthase HemD Vp2S01_0076 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Vp2S01_0076 PF03900 Porphobilinogen deaminase, C-terminal domain Vp2S01_0077 PF12633 Adenylate cyclase NT domain Vp2S01_0077 PF01295 Adenylate cyclase, class-I Vp2S01_0078 PF01491 Frataxin-like domain Vp2S01_0080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vp2S01_0080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vp2S01_0081 PF01678 Diaminopimelate epimerase Vp2S01_0083 PF00589 Phage integrase family Vp2S01_0083 PF02899 Phage integrase, N-terminal SAM-like domain Vp2S01_0084 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_0085 PF00563 EAL domain Vp2S01_0085 PF08495 FIST N domain Vp2S01_0085 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0085 PF10442 FIST C domain Vp2S01_0090 PF12146 Serine aminopeptidase, S33 Vp2S01_0091 PF01810 LysE type translocator Vp2S01_0092 PF00563 EAL domain Vp2S01_0092 PF08668 HDOD domain Vp2S01_0093 PF01022 Bacterial regulatory protein, arsR family Vp2S01_0094 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vp2S01_0094 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0105 PF01914 MarC family integral membrane protein Vp2S01_0108 PF02881 SRP54-type protein, helical bundle domain Vp2S01_0108 PF00448 SRP54-type protein, GTPase domain Vp2S01_0109 PF00005 ABC transporter Vp2S01_0110 PF18075 FtsX extracellular domain Vp2S01_0111 PF00140 Sigma-70 factor, region 1.2 Vp2S01_0111 PF04542 Sigma-70 region 2 Vp2S01_0111 PF04545 Sigma-70, region 4 Vp2S01_0112 PF00581 Rhodanese-like domain Vp2S01_0113 PF01694 Rhomboid family Vp2S01_0113 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease Vp2S01_0114 PF03748 Flagellar basal body-associated protein FliL Vp2S01_0115 PF04345 Chorismate lyase Vp2S01_0116 PF01040 UbiA prenyltransferase family Vp2S01_0117 PF01553 Acyltransferase Vp2S01_0118 PF00717 Peptidase S24-like Vp2S01_0118 PF01726 LexA DNA binding domain Vp2S01_0119 PF04072 Leucine carboxyl methyltransferase Vp2S01_0120 PF01554 MatE Vp2S01_0121 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vp2S01_0121 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_0122 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_0124 PF05958 tRNA (Uracil-5-)-methyltransferase Vp2S01_0125 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_0125 PF00593 TonB dependent receptor Vp2S01_0127 PF01177 Asp/Glu/Hydantoin racemase Vp2S01_0136 PF13091 PLD-like domain Vp2S01_0138 PF01565 FAD binding domain Vp2S01_0138 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Vp2S01_0139 PF08279 HTH domain Vp2S01_0139 PF02237 Biotin protein ligase C terminal domain Vp2S01_0139 PF03099 Biotin/lipoate A/B protein ligase family Vp2S01_0140 PF00485 Phosphoribulokinase / Uridine kinase family Vp2S01_0142 PF03143 Elongation factor Tu C-terminal domain Vp2S01_0142 PF03144 Elongation factor Tu domain 2 Vp2S01_0142 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0143 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Vp2S01_0144 PF02357 Transcription termination factor nusG Vp2S01_0144 PF00467 KOW motif Vp2S01_0145 PF00298 Ribosomal protein L11, RNA binding domain Vp2S01_0145 PF03946 Ribosomal protein L11, N-terminal domain Vp2S01_0146 PF00687 Ribosomal protein L1p/L10e family Vp2S01_0147 PF00466 Ribosomal protein L10 Vp2S01_0148 PF16320 Ribosomal protein L7/L12 dimerisation domain Vp2S01_0148 PF00542 Ribosomal protein L7/L12 C-terminal domain Vp2S01_0149 PF04560 RNA polymerase Rpb2, domain 7 Vp2S01_0149 PF10385 RNA polymerase beta subunit external 1 domain Vp2S01_0149 PF00562 RNA polymerase Rpb2, domain 6 Vp2S01_0149 PF04563 RNA polymerase beta subunit Vp2S01_0149 PF04565 RNA polymerase Rpb2, domain 3 Vp2S01_0149 PF04561 RNA polymerase Rpb2, domain 2 Vp2S01_0150 PF04998 RNA polymerase Rpb1, domain 5 Vp2S01_0150 PF00623 RNA polymerase Rpb1, domain 2 Vp2S01_0150 PF04983 RNA polymerase Rpb1, domain 3 Vp2S01_0150 PF04997 RNA polymerase Rpb1, domain 1 Vp2S01_0150 PF05000 RNA polymerase Rpb1, domain 4 Vp2S01_0151 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Vp2S01_0152 PF00293 NUDIX domain Vp2S01_0152 PF09297 NADH pyrophosphatase zinc ribbon domain Vp2S01_0155 PF01208 Uroporphyrinogen decarboxylase (URO-D) Vp2S01_0156 PF03167 Uracil DNA glycosylase superfamily Vp2S01_0157 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vp2S01_0158 PF04222 Protein of unknown function (DUF416) Vp2S01_0159 PF01595 Cyclin M transmembrane N-terminal domain Vp2S01_0159 PF00571 CBS domain Vp2S01_0160 PF00216 Bacterial DNA-binding protein Vp2S01_0162 PF02844 Phosphoribosylglycinamide synthetase, N domain Vp2S01_0162 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Vp2S01_0162 PF02843 Phosphoribosylglycinamide synthetase, C domain Vp2S01_0163 PF02142 MGS-like domain Vp2S01_0163 PF01808 AICARFT/IMPCHase bienzyme Vp2S01_0165 PF13411 MerR HTH family regulatory protein Vp2S01_0167 PF18500 CadC C-terminal domain 1 Vp2S01_0167 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_0168 PF13520 Amino acid permease Vp2S01_0169 PF01276 Orn/Lys/Arg decarboxylase, major domain Vp2S01_0169 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vp2S01_0169 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vp2S01_0179 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0179 PF05230 MASE2 domain Vp2S01_0180 PF00005 ABC transporter Vp2S01_0180 PF12848 ABC transporter Vp2S01_0181 PF07690 Major Facilitator Superfamily Vp2S01_0182 PF02954 Bacterial regulatory protein, Fis family Vp2S01_0183 PF01207 Dihydrouridine synthase (Dus) Vp2S01_0185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vp2S01_0185 PF00289 Biotin carboxylase, N-terminal domain Vp2S01_0185 PF02785 Biotin carboxylase C-terminal domain Vp2S01_0186 PF00364 Biotin-requiring enzyme Vp2S01_0187 PF01220 Dehydroquinase class II Vp2S01_0188 PF16177 Acetyl-coenzyme A synthetase N-terminus Vp2S01_0188 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_0188 PF00501 AMP-binding enzyme Vp2S01_0191 PF12832 MFS_1 like family Vp2S01_0192 PF00072 Response regulator receiver domain Vp2S01_0192 PF09308 LuxQ, periplasmic Vp2S01_0192 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_0192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0193 PF10415 Fumarase C C-terminus Vp2S01_0193 PF00206 Lyase Vp2S01_0196 PF00474 Sodium:solute symporter family Vp2S01_0198 PF03471 Transporter associated domain Vp2S01_0198 PF00999 Sodium/hydrogen exchanger family Vp2S01_0198 PF02080 TrkA-C domain Vp2S01_0199 PF00072 Response regulator receiver domain Vp2S01_0199 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_0200 PF02683 Cytochrome C biogenesis protein transmembrane region Vp2S01_0200 PF11412 Disulphide bond corrector protein DsbC Vp2S01_0201 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vp2S01_0202 PF00206 Lyase Vp2S01_0202 PF10415 Fumarase C C-terminus Vp2S01_0203 PF04186 FxsA cytoplasmic membrane protein Vp2S01_0204 PF00588 SpoU rRNA Methylase family Vp2S01_0205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vp2S01_0205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vp2S01_0206 PF00672 HAMP domain Vp2S01_0206 PF16527 Two-component sensor protein CpxA, periplasmic domain Vp2S01_0206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0206 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_0207 PF00072 Response regulator receiver domain Vp2S01_0207 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_0208 PF07813 LTXXQ motif family protein Vp2S01_0209 PF16916 Dimerisation domain of Zinc Transporter Vp2S01_0209 PF01545 Cation efflux family Vp2S01_0210 PF00365 Phosphofructokinase Vp2S01_0211 PF01554 MatE Vp2S01_0212 PF00166 Chaperonin 10 Kd subunit Vp2S01_0213 PF00118 TCP-1/cpn60 chaperonin family Vp2S01_0215 PF02308 MgtC family Vp2S01_0216 PF00842 Alanine racemase, C-terminal domain Vp2S01_0216 PF01168 Alanine racemase, N-terminal domain Vp2S01_0218 PF04055 Radical SAM superfamily Vp2S01_0219 PF01132 Elongation factor P (EF-P) OB domain Vp2S01_0219 PF09285 Elongation factor P, C-terminal Vp2S01_0219 PF08207 Elongation factor P (EF-P) KOW-like domain Vp2S01_0221 PF02313 Fumarate reductase subunit D Vp2S01_0222 PF02300 Fumarate reductase subunit C Vp2S01_0223 PF13085 2Fe-2S iron-sulfur cluster binding domain Vp2S01_0223 PF13183 4Fe-4S dicluster domain Vp2S01_0224 PF02910 Fumarate reductase flavoprotein C-term Vp2S01_0224 PF00890 FAD binding domain Vp2S01_0226 PF00152 tRNA synthetases class II (D, K and N) Vp2S01_0228 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_0228 PF08360 QacR-like protein, C-terminal region Vp2S01_0230 PF01551 Peptidase family M23 Vp2S01_0231 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_0231 PF06426 Serine acetyltransferase, N-terminal Vp2S01_0232 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Vp2S01_0232 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Vp2S01_0233 PF02556 Preprotein translocase subunit SecB Vp2S01_0234 PF00581 Rhodanese-like domain Vp2S01_0236 PF01676 Metalloenzyme superfamily Vp2S01_0236 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Vp2S01_0238 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_0238 PF00672 HAMP domain Vp2S01_0240 PF00939 Sodium:sulfate symporter transmembrane region Vp2S01_0241 PF02666 Phosphatidylserine decarboxylase Vp2S01_0242 PF03193 RsgA GTPase Vp2S01_0243 PF00929 Exonuclease Vp2S01_0244 PF08331 Domain of unknown function (DUF1730) Vp2S01_0245 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Vp2S01_0246 PF01520 N-acetylmuramoyl-L-alanine amidase Vp2S01_0247 PF08676 MutL C terminal dimerisation domain Vp2S01_0247 PF01119 DNA mismatch repair protein, C-terminal domain Vp2S01_0249 PF17209 Hfq protein Vp2S01_0250 PF13167 GTP-binding GTPase N-terminal Vp2S01_0250 PF01926 50S ribosome-binding GTPase Vp2S01_0250 PF16360 GTP-binding GTPase Middle Region Vp2S01_0251 PF01145 SPFH domain / Band 7 family Vp2S01_0251 PF12221 Bacterial membrane protein N terminal Vp2S01_0252 PF01145 SPFH domain / Band 7 family Vp2S01_0253 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) Vp2S01_0254 PF00709 Adenylosuccinate synthetase Vp2S01_0255 PF08238 Sel1 repeat Vp2S01_0256 PF00175 Oxidoreductase NAD-binding domain Vp2S01_0256 PF00042 Globin Vp2S01_0256 PF00970 Oxidoreductase FAD-binding domain Vp2S01_0257 PF02082 Transcriptional regulator Vp2S01_0258 PF00575 S1 RNA binding domain Vp2S01_0258 PF08206 Ribonuclease B OB domain Vp2S01_0258 PF08461 Ribonuclease R winged-helix domain Vp2S01_0258 PF17876 Cold shock domain Vp2S01_0258 PF00773 RNB domain Vp2S01_0259 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vp2S01_0259 PF00588 SpoU rRNA Methylase family Vp2S01_0260 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_0261 PF00579 tRNA synthetases class I (W and Y) Vp2S01_0264 PF00117 Glutamine amidotransferase class-I Vp2S01_0266 PF00202 Aminotransferase class-III Vp2S01_0267 PF04958 Arginine N-succinyltransferase beta subunit Vp2S01_0268 PF00171 Aldehyde dehydrogenase family Vp2S01_0270 PF13545 Crp-like helix-turn-helix domain Vp2S01_0270 PF00027 Cyclic nucleotide-binding domain Vp2S01_0271 PF00485 Phosphoribulokinase / Uridine kinase family Vp2S01_0272 PF06794 Uncharacterised protein family (UPF0270) Vp2S01_0273 PF00561 alpha/beta hydrolase fold Vp2S01_0275 PF00005 ABC transporter Vp2S01_0275 PF12848 ABC transporter Vp2S01_0276 PF02525 Flavodoxin-like fold Vp2S01_0277 PF00999 Sodium/hydrogen exchanger family Vp2S01_0277 PF02254 TrkA-N domain Vp2S01_0279 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_0280 PF01112 Asparaginase Vp2S01_0281 PF04102 SlyX Vp2S01_0283 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_0283 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vp2S01_0284 PF08348 YheO-like PAS domain Vp2S01_0284 PF13309 HTH domain Vp2S01_0285 PF02635 DsrE/DsrF-like family Vp2S01_0286 PF02635 DsrE/DsrF-like family Vp2S01_0287 PF04077 DsrH like protein Vp2S01_0288 PF00164 Ribosomal protein S12/S23 Vp2S01_0289 PF00177 Ribosomal protein S7p/S5e Vp2S01_0290 PF03144 Elongation factor Tu domain 2 Vp2S01_0290 PF14492 Elongation Factor G, domain II Vp2S01_0290 PF03764 Elongation factor G, domain IV Vp2S01_0290 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0290 PF00679 Elongation factor G C-terminus Vp2S01_0291 PF03143 Elongation factor Tu C-terminal domain Vp2S01_0291 PF03144 Elongation factor Tu domain 2 Vp2S01_0291 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0292 PF00210 Ferritin-like domain Vp2S01_0293 PF00390 Malic enzyme, N-terminal domain Vp2S01_0293 PF03949 Malic enzyme, NAD binding domain Vp2S01_0294 PF01340 Met Apo-repressor, MetJ Vp2S01_0295 PF01053 Cys/Met metabolism PLP-dependent enzyme Vp2S01_0296 PF00742 Homoserine dehydrogenase Vp2S01_0296 PF00696 Amino acid kinase family Vp2S01_0296 PF03447 Homoserine dehydrogenase, NAD binding domain Vp2S01_0297 PF02219 Methylenetetrahydrofolate reductase Vp2S01_0300 PF00311 Phosphoenolpyruvate carboxylase Vp2S01_0301 PF07687 Peptidase dimerisation domain Vp2S01_0301 PF01546 Peptidase family M20/M25/M40 Vp2S01_0302 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0302 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vp2S01_0303 PF00696 Amino acid kinase family Vp2S01_0304 PF00764 Arginosuccinate synthase Vp2S01_0305 PF14698 Argininosuccinate lyase C-terminal Vp2S01_0305 PF00206 Lyase Vp2S01_0305 PF00583 Acetyltransferase (GNAT) family Vp2S01_0307 PF08534 Redoxin Vp2S01_0307 PF00462 Glutaredoxin Vp2S01_0308 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0308 PF03466 LysR substrate binding domain Vp2S01_0309 PF17092 Penicillin-binding protein OB-like domain Vp2S01_0309 PF00905 Penicillin binding protein transpeptidase domain Vp2S01_0309 PF00912 Transglycosylase Vp2S01_0314 PF00263 Bacterial type II and III secretion system protein Vp2S01_0314 PF03958 Bacterial type II/III secretion system short domain Vp2S01_0314 PF11741 AMIN domain Vp2S01_0314 PF07660 Secretin and TonB N terminus short domain Vp2S01_0315 PF01202 Shikimate kinase Vp2S01_0316 PF01761 3-dehydroquinate synthase Vp2S01_0318 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vp2S01_0319 PF00834 Ribulose-phosphate 3 epimerase family Vp2S01_0320 PF01250 Ribosomal protein S6 Vp2S01_0321 PF01084 Ribosomal protein S18 Vp2S01_0322 PF03948 Ribosomal protein L9, C-terminal domain Vp2S01_0322 PF01281 Ribosomal protein L9, N-terminal domain Vp2S01_0324 PF00772 DnaB-like helicase N terminal domain Vp2S01_0324 PF03796 DnaB-like helicase C terminal domain Vp2S01_0325 PF00842 Alanine racemase, C-terminal domain Vp2S01_0325 PF01168 Alanine racemase, N-terminal domain Vp2S01_0327 PF01894 Uncharacterised protein family UPF0047 Vp2S01_0328 PF00342 Phosphoglucose isomerase Vp2S01_0330 PF01475 Ferric uptake regulator family Vp2S01_0332 PF01207 Dihydrouridine synthase (Dus) Vp2S01_0336 PF00667 FAD binding domain Vp2S01_0336 PF00258 Flavodoxin Vp2S01_0336 PF00175 Oxidoreductase NAD-binding domain Vp2S01_0337 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vp2S01_0337 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vp2S01_0338 PF01507 Phosphoadenosine phosphosulfate reductase family Vp2S01_0348 PF00999 Sodium/hydrogen exchanger family Vp2S01_0349 PF02310 B12 binding domain Vp2S01_0349 PF00809 Pterin binding enzyme Vp2S01_0349 PF02574 Homocysteine S-methyltransferase Vp2S01_0349 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vp2S01_0349 PF02607 B12 binding domain Vp2S01_0350 PF01842 ACT domain Vp2S01_0350 PF00696 Amino acid kinase family Vp2S01_0352 PF00266 Aminotransferase class-V Vp2S01_0354 PF17755 UvrA DNA-binding domain Vp2S01_0354 PF17760 UvrA interaction domain Vp2S01_0354 PF00005 ABC transporter Vp2S01_0355 PF00483 Nucleotidyl transferase Vp2S01_0356 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_0357 PF00436 Single-strand binding protein family Vp2S01_0358 PF00563 EAL domain Vp2S01_0358 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0358 PF17157 Gammaproteobacterial periplasmic sensor domain Vp2S01_0362 PF07660 Secretin and TonB N terminus short domain Vp2S01_0362 PF11741 AMIN domain Vp2S01_0362 PF03958 Bacterial type II/III secretion system short domain Vp2S01_0362 PF00263 Bacterial type II and III secretion system protein Vp2S01_0363 PF13401 AAA domain Vp2S01_0363 PF01471 Putative peptidoglycan binding domain Vp2S01_0365 PF00437 Type II/IV secretion system protein Vp2S01_0365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vp2S01_0366 PF00482 Type II secretion system (T2SS), protein F Vp2S01_0377 PF04085 rod shape-determining protein MreC Vp2S01_0378 PF04093 rod shape-determining protein MreD Vp2S01_0379 PF02545 Maf-like protein Vp2S01_0380 PF10150 Ribonuclease E/G family Vp2S01_0380 PF00575 S1 RNA binding domain Vp2S01_0381 PF13116 Protein of unknown function Vp2S01_0381 PF13502 AsmA-like C-terminal region Vp2S01_0382 PF00795 Carbon-nitrogen hydrolase Vp2S01_0383 PF01523 Putative modulator of DNA gyrase Vp2S01_0384 PF13638 PIN domain Vp2S01_0384 PF02562 PhoH-like protein Vp2S01_0385 PF18339 RapA N-terminal Tudor like domain 1 Vp2S01_0385 PF12137 RNA polymerase recycling family C-terminal Vp2S01_0385 PF00271 Helicase conserved C-terminal domain Vp2S01_0385 PF18337 RapA N-terminal Tudor like domain Vp2S01_0385 PF00176 SNF2 family N-terminal domain Vp2S01_0388 PF00849 RNA pseudouridylate synthase Vp2S01_0389 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vp2S01_0389 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vp2S01_0390 PF04751 Protein of unknown function (DUF615) Vp2S01_0391 PF01523 Putative modulator of DNA gyrase Vp2S01_0392 PF01769 Divalent cation transporter Vp2S01_0392 PF03448 MgtE intracellular N domain Vp2S01_0392 PF00571 CBS domain Vp2S01_0393 PF00381 PTS HPr component phosphorylation site Vp2S01_0394 PF03668 P-loop ATPase protein family Vp2S01_0395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_0396 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vp2S01_0397 PF04963 Sigma-54 factor, core binding domain Vp2S01_0397 PF04552 Sigma-54, DNA binding domain Vp2S01_0397 PF00309 Sigma-54 factor, Activator interacting domain (AID) Vp2S01_0398 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vp2S01_0398 PF00005 ABC transporter Vp2S01_0399 PF03968 OstA-like protein Vp2S01_0401 PF01380 SIS domain Vp2S01_0401 PF00571 CBS domain Vp2S01_0402 PF01699 Sodium/calcium exchanger protein Vp2S01_0403 PF00005 ABC transporter Vp2S01_0404 PF02405 Permease MlaE Vp2S01_0405 PF02470 MlaD protein Vp2S01_0406 PF05494 MlaC protein Vp2S01_0408 PF01722 BolA-like protein Vp2S01_0409 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vp2S01_0410 PF01553 Acyltransferase Vp2S01_0411 PF01042 Endoribonuclease L-PSP Vp2S01_0412 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Vp2S01_0412 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Vp2S01_0413 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vp2S01_0413 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vp2S01_0414 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vp2S01_0414 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vp2S01_0416 PF06877 Regulator of ribonuclease activity B Vp2S01_0418 PF00583 Acetyltransferase (GNAT) family Vp2S01_0420 PF08264 Anticodon-binding domain of tRNA Vp2S01_0420 PF10458 Valyl tRNA synthetase tRNA binding arm Vp2S01_0420 PF00133 tRNA synthetases class I (I, L, M and V) Vp2S01_0421 PF04364 DNA polymerase III chi subunit, HolC Vp2S01_0422 PF00883 Cytosol aminopeptidase family, catalytic domain Vp2S01_0422 PF02789 Cytosol aminopeptidase family, N-terminal domain Vp2S01_0423 PF03739 Lipopolysaccharide export system permease LptF/LptG Vp2S01_0424 PF03739 Lipopolysaccharide export system permease LptF/LptG Vp2S01_0426 PF10011 Predicted membrane protein (DUF2254) Vp2S01_0427 PF00106 short chain dehydrogenase Vp2S01_0428 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_0428 PF08360 QacR-like protein, C-terminal region Vp2S01_0430 PF13533 Biotin-lipoyl like Vp2S01_0432 PF01522 Polysaccharide deacetylase Vp2S01_0434 PF02378 Phosphotransferase system, EIIC Vp2S01_0435 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Vp2S01_0436 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vp2S01_0436 PF02056 Family 4 glycosyl hydrolase Vp2S01_0437 PF04794 YdjC-like protein Vp2S01_0438 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vp2S01_0438 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_0439 PF00072 Response regulator receiver domain Vp2S01_0444 PF00171 Aldehyde dehydrogenase family Vp2S01_0445 PF00672 HAMP domain Vp2S01_0445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_0445 PF17200 Single Cache domain 2 Vp2S01_0446 PF01464 Transglycosylase SLT domain Vp2S01_0446 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Vp2S01_0447 PF04362 Bacterial Fe(2+) trafficking Vp2S01_0448 PF00633 Helix-hairpin-helix motif Vp2S01_0448 PF14815 NUDIX domain Vp2S01_0448 PF00730 HhH-GPD superfamily base excision DNA repair protein Vp2S01_0449 PF02390 Putative methyltransferase Vp2S01_0450 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vp2S01_0451 PF04960 Glutaminase Vp2S01_0452 PF06969 HemN C-terminal domain Vp2S01_0452 PF04055 Radical SAM superfamily Vp2S01_0453 PF01725 Ham1 family Vp2S01_0455 PF02594 Uncharacterised ACR, YggU family COG1872 Vp2S01_0456 PF02325 YGGT family Vp2S01_0457 PF14748 Pyrroline-5-carboxylate reductase dimerisation Vp2S01_0457 PF03807 NADP oxidoreductase coenzyme F420-dependent Vp2S01_0458 PF01168 Alanine racemase, N-terminal domain Vp2S01_0459 PF00437 Type II/IV secretion system protein Vp2S01_0460 PF00437 Type II/IV secretion system protein Vp2S01_0461 PF03652 Holliday junction resolvase Vp2S01_0462 PF02622 Uncharacterized ACR, COG1678 Vp2S01_0463 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Vp2S01_0463 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Vp2S01_0464 PF04452 RNA methyltransferase Vp2S01_0465 PF04231 Endonuclease I Vp2S01_0466 PF17283 SprT-like zinc ribbon domain Vp2S01_0466 PF10263 SprT-like family Vp2S01_0468 PF02773 S-adenosylmethionine synthetase, C-terminal domain Vp2S01_0468 PF00438 S-adenosylmethionine synthetase, N-terminal domain Vp2S01_0468 PF02772 S-adenosylmethionine synthetase, central domain Vp2S01_0470 PF00456 Transketolase, thiamine diphosphate binding domain Vp2S01_0470 PF02779 Transketolase, pyrimidine binding domain Vp2S01_0470 PF02780 Transketolase, C-terminal domain Vp2S01_0471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0471 PF03466 LysR substrate binding domain Vp2S01_0472 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_0472 PF00593 TonB dependent receptor Vp2S01_0473 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0473 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vp2S01_0475 PF00162 Phosphoglycerate kinase Vp2S01_0476 PF01116 Fructose-bisphosphate aldolase class-II Vp2S01_0477 PF00924 Mechanosensitive ion channel Vp2S01_0477 PF05552 Conserved TM helix Vp2S01_0478 PF04073 Aminoacyl-tRNA editing domain Vp2S01_0479 PF01810 LysE type translocator Vp2S01_0480 PF03466 LysR substrate binding domain Vp2S01_0480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0481 PF04402 Protein of unknown function (DUF541) Vp2S01_0482 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vp2S01_0482 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vp2S01_0482 PF01842 ACT domain Vp2S01_0483 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Vp2S01_0484 PF01812 5-formyltetrahydrofolate cyclo-ligase family Vp2S01_0485 PF05164 Cell division protein ZapA Vp2S01_0486 PF03695 Uncharacterised protein family (UPF0149) Vp2S01_0487 PF01494 FAD binding domain Vp2S01_0488 PF01494 FAD binding domain Vp2S01_0490 PF01571 Aminomethyltransferase folate-binding domain Vp2S01_0491 PF03937 Flavinator of succinate dehydrogenase Vp2S01_0492 PF02910 Fumarate reductase flavoprotein C-term Vp2S01_0492 PF00890 FAD binding domain Vp2S01_0493 PF08281 Sigma-70, region 4 Vp2S01_0493 PF04542 Sigma-70 region 2 Vp2S01_0494 PF03872 Anti sigma-E protein RseA, N-terminal domain Vp2S01_0494 PF03873 Anti sigma-E protein RseA, C-terminal domain Vp2S01_0495 PF03888 MucB/RseB N-terminal domain Vp2S01_0495 PF17188 MucB/RseB C-terminal domain Vp2S01_0497 PF00679 Elongation factor G C-terminus Vp2S01_0497 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0497 PF06421 GTP-binding protein LepA C-terminus Vp2S01_0497 PF03144 Elongation factor Tu domain 2 Vp2S01_0498 PF10502 Signal peptidase, peptidase S26 Vp2S01_0499 PF00035 Double-stranded RNA binding motif Vp2S01_0499 PF14622 Ribonuclease-III-like Vp2S01_0500 PF07650 KH domain Vp2S01_0500 PF01926 50S ribosome-binding GTPase Vp2S01_0501 PF02565 Recombination protein O C terminal Vp2S01_0501 PF11967 Recombination protein O N terminal Vp2S01_0502 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Vp2S01_0503 PF01648 4'-phosphopantetheinyl transferase superfamily Vp2S01_0504 PF00672 HAMP domain Vp2S01_0504 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_0504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0504 PF01627 Hpt domain Vp2S01_0504 PF00072 Response regulator receiver domain Vp2S01_0504 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vp2S01_0505 PF01938 TRAM domain Vp2S01_0505 PF05958 tRNA (Uracil-5-)-methyltransferase Vp2S01_0506 PF02824 TGS domain Vp2S01_0506 PF04607 Region found in RelA / SpoT proteins Vp2S01_0506 PF13291 ACT domain Vp2S01_0507 PF03819 MazG nucleotide pyrophosphohydrolase domain Vp2S01_0508 PF06418 CTP synthase N-terminus Vp2S01_0508 PF00117 Glutamine amidotransferase class-I Vp2S01_0509 PF03952 Enolase, N-terminal domain Vp2S01_0509 PF00113 Enolase, C-terminal TIM barrel domain Vp2S01_0510 PF04977 Septum formation initiator Vp2S01_0511 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Vp2S01_0512 PF02542 YgbB family Vp2S01_0513 PF01142 tRNA pseudouridine synthase D (TruD) Vp2S01_0514 PF01975 Survival protein SurE Vp2S01_0516 PF01476 LysM domain Vp2S01_0516 PF01551 Peptidase family M23 Vp2S01_0517 PF04539 Sigma-70 region 3 Vp2S01_0517 PF04545 Sigma-70, region 4 Vp2S01_0517 PF00140 Sigma-70 factor, region 1.2 Vp2S01_0517 PF04542 Sigma-70 region 2 Vp2S01_0518 PF05190 MutS family domain IV Vp2S01_0518 PF05192 MutS domain III Vp2S01_0518 PF05188 MutS domain II Vp2S01_0518 PF01624 MutS domain I Vp2S01_0518 PF00488 MutS domain V Vp2S01_0519 PF02464 Competence-damaged protein Vp2S01_0520 PF00154 recA bacterial DNA recombination protein Vp2S01_0521 PF02631 RecX family Vp2S01_0522 PF02272 DHHA1 domain Vp2S01_0522 PF01411 tRNA synthetases class II (A) Vp2S01_0522 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_0523 PF00696 Amino acid kinase family Vp2S01_0523 PF13840 ACT domain Vp2S01_0523 PF01842 ACT domain Vp2S01_0524 PF02599 Global regulator protein family Vp2S01_0527 PF00682 HMGL-like Vp2S01_0527 PF00364 Biotin-requiring enzyme Vp2S01_0527 PF02436 Conserved carboxylase domain Vp2S01_0528 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Vp2S01_0529 PF00107 Zinc-binding dehydrogenase Vp2S01_0529 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_0530 PF09335 SNARE associated Golgi protein Vp2S01_0531 PF00675 Insulinase (Peptidase family M16) Vp2S01_0531 PF05193 Peptidase M16 inactive domain Vp2S01_0532 PF04262 Glutamate-cysteine ligase Vp2S01_0534 PF02664 S-Ribosylhomocysteinase (LuxS) Vp2S01_0535 PF00571 CBS domain Vp2S01_0535 PF03471 Transporter associated domain Vp2S01_0535 PF01595 Cyclin M transmembrane N-terminal domain Vp2S01_0536 PF01578 Cytochrome C assembly protein Vp2S01_0537 PF00448 SRP54-type protein, GTPase domain Vp2S01_0537 PF02881 SRP54-type protein, helical bundle domain Vp2S01_0537 PF02978 Signal peptide binding domain Vp2S01_0538 PF00886 Ribosomal protein S16 Vp2S01_0539 PF01782 RimM N-terminal domain Vp2S01_0539 PF05239 PRC-barrel domain Vp2S01_0540 PF01746 tRNA (Guanine-1)-methyltransferase Vp2S01_0541 PF01245 Ribosomal protein L19 Vp2S01_0542 PF03884 DNA gyrase inhibitor YacG Vp2S01_0543 PF07072 Cell division protein Vp2S01_0544 PF01121 Dephospho-CoA kinase Vp2S01_0545 PF01478 Type IV leader peptidase family Vp2S01_0545 PF06750 Bacterial Peptidase A24 N-terminal domain Vp2S01_0546 PF00482 Type II secretion system (T2SS), protein F Vp2S01_0547 PF00437 Type II/IV secretion system protein Vp2S01_0547 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vp2S01_0548 PF00114 Pilin (bacterial filament) Vp2S01_0548 PF07963 Prokaryotic N-terminal methylation motif Vp2S01_0549 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Vp2S01_0549 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Vp2S01_0550 PF01510 N-acetylmuramoyl-L-alanine amidase Vp2S01_0551 PF07729 FCD domain Vp2S01_0551 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_0552 PF17831 Pyruvate dehydrogenase E1 component middle domain Vp2S01_0552 PF00456 Transketolase, thiamine diphosphate binding domain Vp2S01_0553 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vp2S01_0553 PF00364 Biotin-requiring enzyme Vp2S01_0553 PF02817 e3 binding domain Vp2S01_0554 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vp2S01_0554 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_0555 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_0556 PF00156 Phosphoribosyl transferase domain Vp2S01_0557 PF00484 Carbonic anhydrase Vp2S01_0558 PF01740 STAS domain Vp2S01_0558 PF00916 Sulfate permease family Vp2S01_0559 PF00005 ABC transporter Vp2S01_0560 PF01061 ABC-2 type transporter Vp2S01_0561 PF03279 Bacterial lipid A biosynthesis acyltransferase Vp2S01_0562 PF02569 Pantoate-beta-alanine ligase Vp2S01_0563 PF02548 Ketopantoate hydroxymethyltransferase Vp2S01_0564 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vp2S01_0565 PF12627 Probable RNA and SrmB- binding site of polymerase A Vp2S01_0565 PF12626 Polymerase A arginine-rich C-terminus Vp2S01_0565 PF01743 Poly A polymerase head domain Vp2S01_0566 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vp2S01_0567 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vp2S01_0568 PF17746 SfsA N-terminal OB domain Vp2S01_0568 PF03749 Sugar fermentation stimulation protein RE domain Vp2S01_0569 PF08482 ATP-dependent helicase C-terminal Vp2S01_0569 PF00271 Helicase conserved C-terminal domain Vp2S01_0569 PF00270 DEAD/DEAH box helicase Vp2S01_0569 PF04408 Helicase associated domain (HA2) Vp2S01_0570 PF00912 Transglycosylase Vp2S01_0570 PF14814 Bifunctional transglycosylase second domain Vp2S01_0570 PF00905 Penicillin binding protein transpeptidase domain Vp2S01_0571 PF01734 Patatin-like phospholipase Vp2S01_0572 PF00330 Aconitase family (aconitate hydratase) Vp2S01_0572 PF06434 Aconitate hydratase 2 N-terminus Vp2S01_0572 PF11791 Aconitate B N-terminal domain Vp2S01_0573 PF06062 Uncharacterised protein family (UPF0231) Vp2S01_0574 PF00543 Nitrogen regulatory protein P-II Vp2S01_0575 PF00909 Ammonium Transporter Family Vp2S01_0576 PF13416 Bacterial extracellular solute-binding protein Vp2S01_0578 PF08402 TOBE domain Vp2S01_0578 PF00005 ABC transporter Vp2S01_0579 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vp2S01_0579 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vp2S01_0579 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vp2S01_0579 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vp2S01_0580 PF06165 Glycosyltransferase family 36 Vp2S01_0580 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Vp2S01_0581 PF00728 Glycosyl hydrolase family 20, catalytic domain Vp2S01_0581 PF02838 Glycosyl hydrolase family 20, domain 2 Vp2S01_0582 PF01869 BadF/BadG/BcrA/BcrD ATPase family Vp2S01_0584 PF00005 ABC transporter Vp2S01_0584 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_0585 PF00005 ABC transporter Vp2S01_0585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_0586 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_0586 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_0587 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_0588 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_0589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0589 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_0589 PF00072 Response regulator receiver domain Vp2S01_0589 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_0590 PF05175 Methyltransferase small domain Vp2S01_0590 PF08468 Methyltransferase small domain N-terminal Vp2S01_0591 PF01594 AI-2E family transporter Vp2S01_0594 PF00202 Aminotransferase class-III Vp2S01_0595 PF01521 Iron-sulphur cluster biosynthesis Vp2S01_0597 PF00873 AcrB/AcrD/AcrF family Vp2S01_0598 PF01551 Peptidase family M23 Vp2S01_0598 PF08525 Opacity-associated protein A N-terminal motif Vp2S01_0598 PF01476 LysM domain Vp2S01_0599 PF00579 tRNA synthetases class I (W and Y) Vp2S01_0601 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Vp2S01_0602 PF13609 Gram-negative porin Vp2S01_0603 PF01272 Transcription elongation factor, GreA/GreB, C-term Vp2S01_0603 PF03449 Transcription elongation factor, N-terminal Vp2S01_0604 PF01985 CRS1 / YhbY (CRM) domain Vp2S01_0605 PF01728 FtsJ-like methyltransferase Vp2S01_0606 PF06480 FtsH Extracellular Vp2S01_0606 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_0606 PF17862 AAA+ lid domain Vp2S01_0606 PF01434 Peptidase family M41 Vp2S01_0607 PF00809 Pterin binding enzyme Vp2S01_0608 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vp2S01_0608 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vp2S01_0608 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vp2S01_0608 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vp2S01_0609 PF03840 Preprotein translocase SecG subunit Vp2S01_0610 PF17384 RimP C-terminal SH3 domain Vp2S01_0610 PF02576 RimP N-terminal domain Vp2S01_0611 PF00575 S1 RNA binding domain Vp2S01_0611 PF13184 NusA-like KH domain Vp2S01_0611 PF08529 NusA N-terminal domain Vp2S01_0612 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0612 PF04760 Translation initiation factor IF-2, N-terminal region Vp2S01_0612 PF11987 Translation-initiation factor 2 Vp2S01_0612 PF08364 Bacterial translation initiation factor IF-2 associated region Vp2S01_0613 PF02033 Ribosome-binding factor A Vp2S01_0614 PF16198 tRNA pseudouridylate synthase B C-terminal domain Vp2S01_0614 PF09157 Pseudouridine synthase II TruB, C-terminal Vp2S01_0614 PF01509 TruB family pseudouridylate synthase (N terminal domain) Vp2S01_0615 PF00312 Ribosomal protein S15 Vp2S01_0616 PF00575 S1 RNA binding domain Vp2S01_0616 PF00013 KH domain Vp2S01_0616 PF03725 3' exoribonuclease family, domain 2 Vp2S01_0616 PF01138 3' exoribonuclease family, domain 1 Vp2S01_0616 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Vp2S01_0617 PF13181 Tetratricopeptide repeat Vp2S01_0617 PF07719 Tetratricopeptide repeat Vp2S01_0619 PF01554 MatE Vp2S01_0622 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0622 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_0622 PF00563 EAL domain Vp2S01_0624 PF13508 Acetyltransferase (GNAT) domain Vp2S01_0628 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0628 PF03144 Elongation factor Tu domain 2 Vp2S01_0628 PF16658 Class II release factor RF3, C-terminal domain Vp2S01_0630 PF01026 TatD related DNase Vp2S01_0631 PF07670 Nucleoside recognition Vp2S01_0631 PF07662 Na+ dependent nucleoside transporter C-terminus Vp2S01_0631 PF01773 Na+ dependent nucleoside transporter N-terminus Vp2S01_0632 PF01791 DeoC/LacD family aldolase Vp2S01_0633 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Vp2S01_0633 PF02885 Glycosyl transferase family, helical bundle domain Vp2S01_0633 PF00591 Glycosyl transferase family, a/b domain Vp2S01_0634 PF01676 Metalloenzyme superfamily Vp2S01_0635 PF01048 Phosphorylase superfamily Vp2S01_0637 PF18429 Domain of unknown function (DUF5609) Vp2S01_0639 PF18073 Rubredoxin metal binding domain Vp2S01_0640 PF00679 Elongation factor G C-terminus Vp2S01_0640 PF00009 Elongation factor Tu GTP binding domain Vp2S01_0640 PF03144 Elongation factor Tu domain 2 Vp2S01_0640 PF14492 Elongation Factor G, domain II Vp2S01_0640 PF03764 Elongation factor G, domain IV Vp2S01_0641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0641 PF03466 LysR substrate binding domain Vp2S01_0643 PF00501 AMP-binding enzyme Vp2S01_0644 PF02805 Metal binding domain of Ada Vp2S01_0644 PF12833 Helix-turn-helix domain Vp2S01_0649 PF04972 BON domain Vp2S01_0649 PF00263 Bacterial type II and III secretion system protein Vp2S01_0649 PF13629 Pilus formation protein N terminal region Vp2S01_0655 PF00437 Type II/IV secretion system protein Vp2S01_0661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0661 PF03466 LysR substrate binding domain Vp2S01_0662 PF13520 Amino acid permease Vp2S01_0663 PF04074 YhcH/YjgK/YiaL Vp2S01_0664 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vp2S01_0664 PF02929 Beta galactosidase small chain Vp2S01_0664 PF16353 Domain of unknown function(DUF4981) Vp2S01_0664 PF00703 Glycosyl hydrolases family 2 Vp2S01_0664 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vp2S01_0665 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_0666 PF16363 GDP-mannose 4,6 dehydratase Vp2S01_0667 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Vp2S01_0667 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Vp2S01_0668 PF08544 GHMP kinases C terminal Vp2S01_0668 PF00288 GHMP kinases N terminal domain Vp2S01_0668 PF10509 Galactokinase galactose-binding signature Vp2S01_0669 PF01263 Aldose 1-epimerase Vp2S01_0670 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_0673 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_0674 PF01588 Putative tRNA binding domain Vp2S01_0677 PF01544 CorA-like Mg2+ transporter protein Vp2S01_0678 PF01266 FAD dependent oxidoreductase Vp2S01_0678 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Vp2S01_0679 PF00455 DeoR C terminal sensor domain Vp2S01_0679 PF08220 DeoR-like helix-turn-helix domain Vp2S01_0680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vp2S01_0680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vp2S01_0681 PF00230 Major intrinsic protein Vp2S01_0683 PF07690 Major Facilitator Superfamily Vp2S01_0684 PF03009 Glycerophosphoryl diester phosphodiesterase family Vp2S01_0685 PF14602 Hexapeptide repeat of succinyl-transferase Vp2S01_0685 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Vp2S01_0686 PF07130 YebG protein Vp2S01_0687 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0687 PF03466 LysR substrate binding domain Vp2S01_0689 PF11893 Domain of unknown function (DUF3413) Vp2S01_0689 PF00884 Sulfatase Vp2S01_0690 PF17946 RecC C-terminal domain Vp2S01_0691 PF00580 UvrD/REP helicase N-terminal domain Vp2S01_0691 PF13361 UvrD-like helicase C-terminal domain Vp2S01_0691 PF12705 PD-(D/E)XK nuclease superfamily Vp2S01_0692 PF13538 UvrD-like helicase C-terminal domain Vp2S01_0694 PF00696 Amino acid kinase family Vp2S01_0694 PF00583 Acetyltransferase (GNAT) family Vp2S01_0696 PF03562 MltA specific insert domain Vp2S01_0696 PF06725 3D domain Vp2S01_0697 PF00899 ThiF family Vp2S01_0698 PF02657 Fe-S metabolism associated domain Vp2S01_0699 PF17158 Membrane-associated sensor, integral membrane domain Vp2S01_0699 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0700 PF00266 Aminotransferase class-V Vp2S01_0701 PF01965 DJ-1/PfpI family Vp2S01_0702 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vp2S01_0702 PF02558 Ketopantoate reductase PanE/ApbA Vp2S01_0703 PF03502 Nucleoside-specific channel-forming protein, Tsx Vp2S01_0707 PF04545 Sigma-70, region 4 Vp2S01_0707 PF04542 Sigma-70 region 2 Vp2S01_0709 PF07690 Major Facilitator Superfamily Vp2S01_0710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vp2S01_0711 PF03923 Uncharacterized lipoprotein Vp2S01_0711 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vp2S01_0712 PF05175 Methyltransferase small domain Vp2S01_0713 PF01722 BolA-like protein Vp2S01_0714 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Vp2S01_0714 PF11973 NQRA C-terminal domain Vp2S01_0715 PF03116 NQR2, RnfD, RnfE family Vp2S01_0716 PF04205 FMN-binding domain Vp2S01_0717 PF02508 Rnf-Nqr subunit, membrane protein Vp2S01_0718 PF02508 Rnf-Nqr subunit, membrane protein Vp2S01_0719 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_0719 PF00970 Oxidoreductase FAD-binding domain Vp2S01_0719 PF00175 Oxidoreductase NAD-binding domain Vp2S01_0720 PF02424 ApbE family Vp2S01_0723 PF00817 impB/mucB/samB family Vp2S01_0723 PF11799 impB/mucB/samB family C-terminal domain Vp2S01_0723 PF11798 IMS family HHH motif Vp2S01_0724 PF00270 DEAD/DEAH box helicase Vp2S01_0724 PF00570 HRDC domain Vp2S01_0724 PF00271 Helicase conserved C-terminal domain Vp2S01_0724 PF09382 RQC domain Vp2S01_0724 PF16124 RecQ zinc-binding Vp2S01_0725 PF01272 Transcription elongation factor, GreA/GreB, C-term Vp2S01_0725 PF03449 Transcription elongation factor, N-terminal Vp2S01_0728 PF00209 Sodium:neurotransmitter symporter family Vp2S01_0730 PF06786 Uncharacterised protein family (UPF0253) Vp2S01_0732 PF04073 Aminoacyl-tRNA editing domain Vp2S01_0732 PF03129 Anticodon binding domain Vp2S01_0732 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vp2S01_0733 PF01980 tRNA-methyltransferase O Vp2S01_0733 PF18389 TrmO C-terminal domain Vp2S01_0734 PF01197 Ribosomal protein L31 Vp2S01_0736 PF03806 AbgT putative transporter family Vp2S01_0737 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Vp2S01_0741 PF04287 tRNA pseudouridine synthase C Vp2S01_0742 PF00849 RNA pseudouridylate synthase Vp2S01_0743 PF11944 Protein of unknown function (DUF3461) Vp2S01_0744 PF08335 GlnD PII-uridylyltransferase Vp2S01_0744 PF01966 HD domain Vp2S01_0744 PF01909 Nucleotidyltransferase domain Vp2S01_0744 PF01842 ACT domain Vp2S01_0745 PF00557 Metallopeptidase family M24 Vp2S01_0746 PF00318 Ribosomal protein S2 Vp2S01_0747 PF00889 Elongation factor TS Vp2S01_0748 PF00696 Amino acid kinase family Vp2S01_0749 PF01765 Ribosome recycling factor Vp2S01_0750 PF01255 Putative undecaprenyl diphosphate synthase Vp2S01_0752 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Vp2S01_0752 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Vp2S01_0752 PF13288 DXP reductoisomerase C-terminal domain Vp2S01_0753 PF17820 PDZ domain Vp2S01_0753 PF02163 Peptidase family M50 Vp2S01_0754 PF01103 Surface antigen Vp2S01_0754 PF07244 Surface antigen variable number repeat Vp2S01_0755 PF03938 Outer membrane protein (OmpH-like) Vp2S01_0756 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_0756 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Vp2S01_0757 PF07977 FabA-like domain Vp2S01_0758 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Vp2S01_0758 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_0759 PF02684 Lipid-A-disaccharide synthetase Vp2S01_0760 PF01351 Ribonuclease HII Vp2S01_0761 PF01336 OB-fold nucleic acid binding domain Vp2S01_0761 PF02811 PHP domain Vp2S01_0761 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vp2S01_0761 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vp2S01_0761 PF14579 Helix-hairpin-helix motif Vp2S01_0762 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Vp2S01_0763 PF11734 TilS substrate C-terminal domain Vp2S01_0763 PF09179 TilS substrate binding domain Vp2S01_0763 PF01171 PP-loop family Vp2S01_0764 PF00034 Cytochrome c Vp2S01_0765 PF00543 Nitrogen regulatory protein P-II Vp2S01_0766 PF03372 Endonuclease/Exonuclease/phosphatase family Vp2S01_0768 PF01476 LysM domain Vp2S01_0768 PF01464 Transglycosylase SLT domain Vp2S01_0769 PF00753 Metallo-beta-lactamase superfamily Vp2S01_0769 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vp2S01_0770 PF08241 Methyltransferase domain Vp2S01_0771 PF00075 RNase H Vp2S01_0772 PF00929 Exonuclease Vp2S01_0774 PF01740 STAS domain Vp2S01_0774 PF00916 Sulfate permease family Vp2S01_0775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vp2S01_0775 PF02770 Acyl-CoA dehydrogenase, middle domain Vp2S01_0775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vp2S01_0775 PF09317 Domain of unknown function (DUF1974) Vp2S01_0776 PF13580 SIS domain Vp2S01_0777 PF13230 Glutamine amidotransferases class-II Vp2S01_0778 PF00551 Formyl transferase Vp2S01_0779 PF00586 AIR synthase related protein, N-terminal domain Vp2S01_0779 PF02769 AIR synthase related protein, C-terminal domain Vp2S01_0781 PF00860 Permease family Vp2S01_0784 PF03358 NADPH-dependent FMN reductase Vp2S01_0785 PF03960 ArsC family Vp2S01_0786 PF13181 Tetratricopeptide repeat Vp2S01_0786 PF01435 Peptidase family M48 Vp2S01_0788 PF01594 AI-2E family transporter Vp2S01_0789 PF00578 AhpC/TSA family Vp2S01_0790 PF01842 ACT domain Vp2S01_0791 PF00701 Dihydrodipicolinate synthetase family Vp2S01_0795 PF07687 Peptidase dimerisation domain Vp2S01_0795 PF01546 Peptidase family M20/M25/M40 Vp2S01_0796 PF03960 ArsC family Vp2S01_0801 PF11143 Protein of unknown function (DUF2919) Vp2S01_0802 PF04261 Dyp-type peroxidase family Vp2S01_0803 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_0803 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_0803 PF07196 Flagellin hook IN motif Vp2S01_0804 PF07196 Flagellin hook IN motif Vp2S01_0804 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_0804 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_0806 PF07196 Flagellin hook IN motif Vp2S01_0806 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_0806 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_0807 PF03646 FlaG protein Vp2S01_0808 PF07196 Flagellin hook IN motif Vp2S01_0808 PF02465 Flagellar hook-associated protein 2 N-terminus Vp2S01_0808 PF07195 Flagellar hook-associated protein 2 C-terminus Vp2S01_0810 PF02561 Flagellar protein FliS Vp2S01_0811 PF01590 GAF domain Vp2S01_0811 PF02954 Bacterial regulatory protein, Fis family Vp2S01_0811 PF00158 Sigma-54 interaction domain Vp2S01_0812 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0812 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_0813 PF00072 Response regulator receiver domain Vp2S01_0813 PF02954 Bacterial regulatory protein, Fis family Vp2S01_0813 PF00158 Sigma-54 interaction domain Vp2S01_0814 PF02049 Flagellar hook-basal body complex protein FliE Vp2S01_0815 PF08345 Flagellar M-ring protein C-terminal Vp2S01_0815 PF01514 Secretory protein of YscJ/FliF family Vp2S01_0816 PF14841 FliG middle domain Vp2S01_0816 PF01706 FliG C-terminal domain Vp2S01_0816 PF14842 FliG N-terminal domain Vp2S01_0818 PF18269 T3SS EscN ATPase C-terminal domain Vp2S01_0818 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_0822 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vp2S01_0822 PF02154 Flagellar motor switch protein FliM Vp2S01_0823 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vp2S01_0824 PF04347 Flagellar biosynthesis protein, FliO Vp2S01_0825 PF00813 FliP family Vp2S01_0826 PF01313 Bacterial export proteins, family 3 Vp2S01_0827 PF01311 Bacterial export proteins, family 1 Vp2S01_0828 PF01312 FlhB HrpN YscU SpaS Family Vp2S01_0829 PF00771 FHIPEP family Vp2S01_0830 PF00448 SRP54-type protein, GTPase domain Vp2S01_0831 PF10609 NUBPL iron-transfer P-loop NTPase Vp2S01_0832 PF04539 Sigma-70 region 3 Vp2S01_0832 PF04542 Sigma-70 region 2 Vp2S01_0832 PF04545 Sigma-70, region 4 Vp2S01_0833 PF00072 Response regulator receiver domain Vp2S01_0834 PF04344 Chemotaxis phosphatase, CheZ Vp2S01_0835 PF01584 CheW-like domain Vp2S01_0835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_0835 PF02895 Signal transducing histidine kinase, homodimeric domain Vp2S01_0835 PF07194 P2 response regulator binding domain Vp2S01_0835 PF01627 Hpt domain Vp2S01_0836 PF00072 Response regulator receiver domain Vp2S01_0836 PF01339 CheB methylesterase Vp2S01_0837 PF13614 AAA domain Vp2S01_0839 PF01584 CheW-like domain Vp2S01_0841 PF00005 ABC transporter Vp2S01_0842 PF03379 CcmB protein Vp2S01_0843 PF01578 Cytochrome C assembly protein Vp2S01_0844 PF04995 Heme exporter protein D (CcmD) Vp2S01_0845 PF03100 CcmE Vp2S01_0846 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vp2S01_0846 PF01578 Cytochrome C assembly protein Vp2S01_0847 PF08534 Redoxin Vp2S01_0848 PF03918 Cytochrome C biogenesis protein Vp2S01_0850 PF04333 MlaA lipoprotein Vp2S01_0851 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vp2S01_0852 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vp2S01_0854 PF08281 Sigma-70, region 4 Vp2S01_0854 PF04542 Sigma-70 region 2 Vp2S01_0855 PF00108 Thiolase, N-terminal domain Vp2S01_0855 PF02803 Thiolase, C-terminal domain Vp2S01_0856 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_0856 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vp2S01_0856 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vp2S01_0858 PF16187 Middle or third domain of peptidase_M16 Vp2S01_0858 PF05193 Peptidase M16 inactive domain Vp2S01_0858 PF00675 Insulinase (Peptidase family M16) Vp2S01_0859 PF00300 Histidine phosphatase superfamily (branch 1) Vp2S01_0860 PF01713 Smr domain Vp2S01_0861 PF05175 Methyltransferase small domain Vp2S01_0862 PF01264 Chorismate synthase Vp2S01_0863 PF03458 UPF0126 domain Vp2S01_0865 PF04315 Elongation factor P hydroxylase Vp2S01_0866 PF08891 YfcL protein Vp2S01_0867 PF03358 NADPH-dependent FMN reductase Vp2S01_0868 PF01266 FAD dependent oxidoreductase Vp2S01_0868 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vp2S01_0869 PF00109 Beta-ketoacyl synthase, N-terminal domain Vp2S01_0869 PF02801 Beta-ketoacyl synthase, C-terminal domain Vp2S01_0870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vp2S01_0870 PF11890 Domain of unknown function (DUF3410) Vp2S01_0870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vp2S01_0871 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vp2S01_0871 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0873 PF01416 tRNA pseudouridine synthase Vp2S01_0874 PF01039 Carboxyl transferase domain Vp2S01_0874 PF17848 Acetyl-coA carboxylase zinc finger domain Vp2S01_0875 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_0875 PF08245 Mur ligase middle domain Vp2S01_0876 PF05036 Sporulation related domain Vp2S01_0877 PF02674 Colicin V production protein Vp2S01_0878 PF00156 Phosphoribosyl transferase domain Vp2S01_0879 PF03466 LysR substrate binding domain Vp2S01_0879 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_0880 PF00072 Response regulator receiver domain Vp2S01_0882 PF04304 Protein of unknown function (DUF454) Vp2S01_0883 PF00156 Phosphoribosyl transferase domain Vp2S01_0884 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Vp2S01_0884 PF12169 DNA polymerase III subunits gamma and tau domain III Vp2S01_0884 PF12170 DNA polymerase III tau subunit V interacting with alpha Vp2S01_0885 PF02575 YbaB/EbfC DNA-binding family Vp2S01_0886 PF13662 Toprim domain Vp2S01_0886 PF02132 RecR protein Vp2S01_0887 PF00230 Major intrinsic protein Vp2S01_0889 PF01042 Endoribonuclease L-PSP Vp2S01_0890 PF03313 Serine dehydratase alpha chain Vp2S01_0892 PF03692 Putative zinc- or iron-chelating domain Vp2S01_0893 PF04226 Transglycosylase associated protein Vp2S01_0894 PF03692 Putative zinc- or iron-chelating domain Vp2S01_0895 PF05552 Conserved TM helix Vp2S01_0895 PF00924 Mechanosensitive ion channel Vp2S01_0896 PF03992 Antibiotic biosynthesis monooxygenase Vp2S01_0897 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_0899 PF00245 Alkaline phosphatase Vp2S01_0902 PF13847 Methyltransferase domain Vp2S01_0903 PF02743 Cache domain Vp2S01_0903 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_0903 PF00672 HAMP domain Vp2S01_0904 PF01263 Aldose 1-epimerase Vp2S01_0905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vp2S01_0905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0906 PF01641 SelR domain Vp2S01_0908 PF07023 Protein of unknown function (DUF1315) Vp2S01_0909 PF00710 Asparaginase, N-terminal Vp2S01_0909 PF17763 Glutaminase/Asparaginase C-terminal domain Vp2S01_0910 PF01343 Peptidase family S49 Vp2S01_0911 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_0911 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vp2S01_0912 PF00881 Nitroreductase family Vp2S01_0913 PF01751 Toprim domain Vp2S01_0913 PF01131 DNA topoisomerase Vp2S01_0915 PF00106 short chain dehydrogenase Vp2S01_0917 PF00850 Histone deacetylase domain Vp2S01_0920 PF13737 Transposase DDE domain Vp2S01_0925 PF00589 Phage integrase family Vp2S01_0925 PF02899 Phage integrase, N-terminal SAM-like domain Vp2S01_0927 PF00884 Sulfatase Vp2S01_0927 PF11893 Domain of unknown function (DUF3413) Vp2S01_0928 PF07208 Protein of unknown function (DUF1414) Vp2S01_0929 PF04245 37-kD nucleoid-associated bacterial protein Vp2S01_0932 PF03553 Na+/H+ antiporter family Vp2S01_0933 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vp2S01_0933 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0934 PF00027 Cyclic nucleotide-binding domain Vp2S01_0934 PF00520 Ion transport protein Vp2S01_0935 PF01914 MarC family integral membrane protein Vp2S01_0936 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_0936 PF00171 Aldehyde dehydrogenase family Vp2S01_0939 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vp2S01_0939 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vp2S01_0940 PF00462 Glutaredoxin Vp2S01_0942 PF03553 Na+/H+ antiporter family Vp2S01_0942 PF13726 Na+-H+ antiporter family Vp2S01_0943 PF00929 Exonuclease Vp2S01_0944 PF00691 OmpA family Vp2S01_0944 PF18393 MotY N-terminal domain Vp2S01_0945 PF10952 Protein of unknown function (DUF2753) Vp2S01_0946 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_0947 PF00730 HhH-GPD superfamily base excision DNA repair protein Vp2S01_0947 PF10576 Iron-sulfur binding domain of endonuclease III Vp2S01_0947 PF00633 Helix-hairpin-helix motif Vp2S01_0948 PF02508 Rnf-Nqr subunit, membrane protein Vp2S01_0949 PF04205 FMN-binding domain Vp2S01_0950 PF03116 NQR2, RnfD, RnfE family Vp2S01_0951 PF12838 4Fe-4S dicluster domain Vp2S01_0951 PF13375 RnfC Barrel sandwich hybrid domain Vp2S01_0951 PF10531 SLBB domain Vp2S01_0951 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vp2S01_0952 PF04060 Putative Fe-S cluster Vp2S01_0953 PF02508 Rnf-Nqr subunit, membrane protein Vp2S01_0954 PF04851 Type III restriction enzyme, res subunit Vp2S01_0954 PF00271 Helicase conserved C-terminal domain Vp2S01_0954 PF02151 UvrB/uvrC motif Vp2S01_0954 PF12344 Ultra-violet resistance protein B Vp2S01_0954 PF17757 UvrB interaction domain Vp2S01_0955 PF02954 Bacterial regulatory protein, Fis family Vp2S01_0955 PF00158 Sigma-54 interaction domain Vp2S01_0955 PF00072 Response regulator receiver domain Vp2S01_0956 PF01627 Hpt domain Vp2S01_0957 PF01933 Uncharacterised protein family UPF0052 Vp2S01_0958 PF04055 Radical SAM superfamily Vp2S01_0958 PF06463 Molybdenum Cofactor Synthesis C Vp2S01_0959 PF00994 Probable molybdopterin binding domain Vp2S01_0960 PF01967 MoaC family Vp2S01_0961 PF02597 ThiS family Vp2S01_0962 PF02391 MoaE protein Vp2S01_0964 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_0965 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_0966 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_0966 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_0967 PF00005 ABC transporter Vp2S01_0967 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_0968 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_0968 PF00005 ABC transporter Vp2S01_0969 PF13409 Glutathione S-transferase, N-terminal domain Vp2S01_0971 PF13194 Domain of unknown function (DUF4010) Vp2S01_0972 PF01515 Phosphate acetyl/butaryl transferase Vp2S01_0972 PF07085 DRTGG domain Vp2S01_0973 PF00871 Acetokinase family Vp2S01_0974 PF04217 Protein of unknown function, DUF412 Vp2S01_0976 PF02653 Branched-chain amino acid transport system / permease component Vp2S01_0977 PF00005 ABC transporter Vp2S01_0978 PF02903 Alpha amylase, N-terminal ig-like domain Vp2S01_0978 PF00128 Alpha amylase, catalytic domain Vp2S01_0979 PF00072 Response regulator receiver domain Vp2S01_0979 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_0980 PF01207 Dihydrouridine synthase (Dus) Vp2S01_0981 PF03695 Uncharacterised protein family (UPF0149) Vp2S01_0981 PF02810 SEC-C motif Vp2S01_0982 PF02600 Disulfide bond formation protein DsbB Vp2S01_0984 PF06450 Bacterial Na+/H+ antiporter B (NhaB) Vp2S01_0985 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_0985 PF07840 FadR C-terminal domain Vp2S01_0987 PF01588 Putative tRNA binding domain Vp2S01_0987 PF09334 tRNA synthetases class I (M) Vp2S01_0988 PF10609 NUBPL iron-transfer P-loop NTPase Vp2S01_0989 PF00485 Phosphoribulokinase / Uridine kinase family Vp2S01_0991 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Vp2S01_0991 PF12557 Cob(I)alamin adenosyltransferase N terminal Vp2S01_0992 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vp2S01_0993 PF01740 STAS domain Vp2S01_0993 PF00916 Sulfate permease family Vp2S01_0994 PF12111 Polyribonucleotide phosphorylase C terminal Vp2S01_0994 PF00575 S1 RNA binding domain Vp2S01_0994 PF10150 Ribonuclease E/G family Vp2S01_0996 PF00849 RNA pseudouridylate synthase Vp2S01_0996 PF01479 S4 domain Vp2S01_0997 PF02545 Maf-like protein Vp2S01_0998 PF02620 Large ribosomal RNA subunit accumulation protein YceD Vp2S01_0999 PF01783 Ribosomal L32p protein family Vp2S01_1000 PF02504 Fatty acid synthesis protein Vp2S01_1001 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vp2S01_1001 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vp2S01_1002 PF00698 Acyl transferase domain Vp2S01_1004 PF00550 Phosphopantetheine attachment site Vp2S01_1005 PF00109 Beta-ketoacyl synthase, N-terminal domain Vp2S01_1005 PF02801 Beta-ketoacyl synthase, C-terminal domain Vp2S01_1006 PF01063 Amino-transferase class IV Vp2S01_1007 PF02618 YceG-like family Vp2S01_1008 PF02223 Thymidylate kinase Vp2S01_1009 PF09115 DNA polymerase III, delta subunit, C terminal Vp2S01_1010 PF01026 TatD related DNase Vp2S01_1011 PF00367 phosphotransferase system, EIIB Vp2S01_1011 PF02378 Phosphotransferase system, EIIC Vp2S01_1013 PF00209 Sodium:neurotransmitter symporter family Vp2S01_1015 PF01734 Patatin-like phospholipase Vp2S01_1016 PF02887 Pyruvate kinase, alpha/beta domain Vp2S01_1016 PF00224 Pyruvate kinase, barrel domain Vp2S01_1017 PF00480 ROK family Vp2S01_1018 PF00072 Response regulator receiver domain Vp2S01_1018 PF01584 CheW-like domain Vp2S01_1019 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vp2S01_1019 PF01336 OB-fold nucleic acid binding domain Vp2S01_1019 PF02811 PHP domain Vp2S01_1019 PF14579 Helix-hairpin-helix motif Vp2S01_1019 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vp2S01_1022 PF00106 short chain dehydrogenase Vp2S01_1023 PF01343 Peptidase family S49 Vp2S01_1023 PF08496 Peptidase family S49 N-terminal Vp2S01_1024 PF02224 Cytidylate kinase Vp2S01_1025 PF00575 S1 RNA binding domain Vp2S01_1026 PF00216 Bacterial DNA-binding protein Vp2S01_1027 PF06305 Lipopolysaccharide assembly protein A domain Vp2S01_1028 PF18073 Rubredoxin metal binding domain Vp2S01_1029 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Vp2S01_1030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_1032 PF01370 NAD dependent epimerase/dehydratase family Vp2S01_1033 PF00535 Glycosyl transferase family 2 Vp2S01_1035 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Vp2S01_1037 PF02470 MlaD protein Vp2S01_1038 PF04403 Paraquat-inducible protein A Vp2S01_1039 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vp2S01_1040 PF00034 Cytochrome c Vp2S01_1041 PF01568 Molydopterin dinucleotide binding domain Vp2S01_1041 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1041 PF00384 Molybdopterin oxidoreductase Vp2S01_1042 PF03916 Polysulphide reductase, NrfD Vp2S01_1043 PF13247 4Fe-4S dicluster domain Vp2S01_1044 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1045 PF00072 Response regulator receiver domain Vp2S01_1045 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_1046 PF03466 LysR substrate binding domain Vp2S01_1046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1048 PF11412 Disulphide bond corrector protein DsbC Vp2S01_1048 PF02683 Cytochrome C biogenesis protein transmembrane region Vp2S01_1049 PF00085 Thioredoxin Vp2S01_1053 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_1055 PF02687 FtsX-like permease family Vp2S01_1055 PF00005 ABC transporter Vp2S01_1055 PF12704 MacB-like periplasmic core domain Vp2S01_1056 PF00005 ABC transporter Vp2S01_1056 PF02687 FtsX-like permease family Vp2S01_1056 PF12704 MacB-like periplasmic core domain Vp2S01_1057 PF02687 FtsX-like permease family Vp2S01_1057 PF00005 ABC transporter Vp2S01_1057 PF12704 MacB-like periplasmic core domain Vp2S01_1058 PF00857 Isochorismatase family Vp2S01_1059 PF12833 Helix-turn-helix domain Vp2S01_1059 PF02311 AraC-like ligand binding domain Vp2S01_1061 PF08267 Cobalamin-independent synthase, N-terminal domain Vp2S01_1061 PF01717 Cobalamin-independent synthase, Catalytic domain Vp2S01_1063 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_1063 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_1064 PF03466 LysR substrate binding domain Vp2S01_1064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1069 PF00672 HAMP domain Vp2S01_1069 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1070 PF00072 Response regulator receiver domain Vp2S01_1070 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_1071 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1071 PF00672 HAMP domain Vp2S01_1072 PF08497 Radical SAM N-terminal Vp2S01_1072 PF11842 Domain of unknown function (DUF3362) Vp2S01_1072 PF04055 Radical SAM superfamily Vp2S01_1073 PF00563 EAL domain Vp2S01_1073 PF01590 GAF domain Vp2S01_1073 PF00360 Phytochrome region Vp2S01_1073 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1076 PF03466 LysR substrate binding domain Vp2S01_1077 PF08267 Cobalamin-independent synthase, N-terminal domain Vp2S01_1077 PF01717 Cobalamin-independent synthase, Catalytic domain Vp2S01_1079 PF03795 YCII-related domain Vp2S01_1080 PF03061 Thioesterase superfamily Vp2S01_1081 PF04279 Intracellular septation protein A Vp2S01_1083 PF00072 Response regulator receiver domain Vp2S01_1083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1084 PF17327 Acyl homoserine lactone synthase Vp2S01_1085 PF00375 Sodium:dicarboxylate symporter family Vp2S01_1086 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_1086 PF00501 AMP-binding enzyme Vp2S01_1087 PF13545 Crp-like helix-turn-helix domain Vp2S01_1087 PF00027 Cyclic nucleotide-binding domain Vp2S01_1088 PF00290 Tryptophan synthase alpha chain Vp2S01_1089 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_1090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Vp2S01_1090 PF00218 Indole-3-glycerol phosphate synthase Vp2S01_1091 PF00591 Glycosyl transferase family, a/b domain Vp2S01_1091 PF02885 Glycosyl transferase family, helical bundle domain Vp2S01_1092 PF00117 Glutamine amidotransferase class-I Vp2S01_1093 PF00425 chorismate binding enzyme Vp2S01_1093 PF04715 Anthranilate synthase component I, N terminal region Vp2S01_1094 PF08056 Tryptophan operon leader peptide Vp2S01_1095 PF02811 PHP domain Vp2S01_1096 PF01300 Telomere recombination Vp2S01_1098 PF00849 RNA pseudouridylate synthase Vp2S01_1098 PF01479 S4 domain Vp2S01_1099 PF04269 Protein of unknown function, DUF440 Vp2S01_1100 PF09285 Elongation factor P, C-terminal Vp2S01_1100 PF01132 Elongation factor P (EF-P) OB domain Vp2S01_1100 PF08207 Elongation factor P (EF-P) KOW-like domain Vp2S01_1102 PF03104 DNA polymerase family B, exonuclease domain Vp2S01_1102 PF00136 DNA polymerase family B Vp2S01_1103 PF00072 Response regulator receiver domain Vp2S01_1103 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_1104 PF01541 GIY-YIG catalytic domain Vp2S01_1104 PF02151 UvrB/uvrC motif Vp2S01_1104 PF08459 UvrC Helix-hairpin-helix N-terminal Vp2S01_1105 PF01066 CDP-alcohol phosphatidyltransferase Vp2S01_1107 PF00202 Aminotransferase class-III Vp2S01_1108 PF03435 Saccharopine dehydrogenase NADP binding domain Vp2S01_1108 PF16653 Saccharopine dehydrogenase C-terminal domain Vp2S01_1109 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vp2S01_1112 PF00994 Probable molybdopterin binding domain Vp2S01_1114 PF00268 Ribonucleotide reductase, small chain Vp2S01_1115 PF02867 Ribonucleotide reductase, barrel domain Vp2S01_1115 PF03477 ATP cone domain Vp2S01_1115 PF00317 Ribonucleotide reductase, all-alpha domain Vp2S01_1117 PF00521 DNA gyrase/topoisomerase IV, subunit A Vp2S01_1117 PF03989 DNA gyrase C-terminal domain, beta-propeller Vp2S01_1120 PF02335 Cytochrome c552 Vp2S01_1122 PF13247 4Fe-4S dicluster domain Vp2S01_1123 PF03916 Polysulphide reductase, NrfD Vp2S01_1124 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vp2S01_1124 PF01578 Cytochrome C assembly protein Vp2S01_1125 PF08534 Redoxin Vp2S01_1126 PF03918 Cytochrome C biogenesis protein Vp2S01_1128 PF00925 GTP cyclohydrolase II Vp2S01_1133 PF01471 Putative peptidoglycan binding domain Vp2S01_1133 PF03734 L,D-transpeptidase catalytic domain Vp2S01_1134 PF05951 Bacterial protein of unknown function (DUF882) Vp2S01_1135 PF00753 Metallo-beta-lactamase superfamily Vp2S01_1138 PF03480 Bacterial extracellular solute-binding protein, family 7 Vp2S01_1140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vp2S01_1141 PF17200 Single Cache domain 2 Vp2S01_1141 PF07730 Histidine kinase Vp2S01_1142 PF00072 Response regulator receiver domain Vp2S01_1142 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_1143 PF01047 MarR family Vp2S01_1144 PF02028 BCCT, betaine/carnitine/choline family transporter Vp2S01_1145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1145 PF00672 HAMP domain Vp2S01_1149 PF00155 Aminotransferase class I and II Vp2S01_1152 PF00155 Aminotransferase class I and II Vp2S01_1152 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_1154 PF00152 tRNA synthetases class II (D, K and N) Vp2S01_1154 PF01336 OB-fold nucleic acid binding domain Vp2S01_1155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1155 PF02743 Cache domain Vp2S01_1155 PF00672 HAMP domain Vp2S01_1157 PF01242 6-pyruvoyl tetrahydropterin synthase Vp2S01_1159 PF04940 Sensors of blue-light using FAD Vp2S01_1159 PF00563 EAL domain Vp2S01_1160 PF03315 Serine dehydratase beta chain Vp2S01_1160 PF03313 Serine dehydratase alpha chain Vp2S01_1161 PF03222 Tryptophan/tyrosine permease family Vp2S01_1162 PF00293 NUDIX domain Vp2S01_1164 PF09308 LuxQ, periplasmic Vp2S01_1164 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1164 PF00072 Response regulator receiver domain Vp2S01_1164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1165 PF00425 chorismate binding enzyme Vp2S01_1165 PF04715 Anthranilate synthase component I, N terminal region Vp2S01_1168 PF04317 YcjX-like family, DUF463 Vp2S01_1169 PF05128 Domain of unknown function (DUF697) Vp2S01_1170 PF18024 Helix-turn-helix domain Vp2S01_1170 PF00158 Sigma-54 interaction domain Vp2S01_1171 PF13302 Acetyltransferase (GNAT) domain Vp2S01_1174 PF00589 Phage integrase family Vp2S01_1174 PF13495 Phage integrase, N-terminal SAM-like domain Vp2S01_1195 PF00293 NUDIX domain Vp2S01_1204 PF01810 LysE type translocator Vp2S01_1215 PF00293 NUDIX domain Vp2S01_1215 PF13344 Haloacid dehalogenase-like hydrolase Vp2S01_1234 PF01042 Endoribonuclease L-PSP Vp2S01_1265 PF13737 Transposase DDE domain Vp2S01_1268 PF13344 Haloacid dehalogenase-like hydrolase Vp2S01_1268 PF00293 NUDIX domain Vp2S01_1269 PF00857 Isochorismatase family Vp2S01_1275 PF00293 NUDIX domain Vp2S01_1291 PF01810 LysE type translocator Vp2S01_1327 PF04463 Protein of unknown function (DUF523) Vp2S01_1329 PF13737 Transposase DDE domain Vp2S01_1336 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_1337 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_1367 PF13333 Integrase core domain Vp2S01_1367 PF00665 Integrase core domain Vp2S01_1367 PF13276 HTH-like domain Vp2S01_1376 PF03553 Na+/H+ antiporter family Vp2S01_1377 PF00120 Glutamine synthetase, catalytic domain Vp2S01_1378 PF07722 Peptidase C26 Vp2S01_1379 PF07883 Cupin domain Vp2S01_1379 PF01381 Helix-turn-helix Vp2S01_1380 PF00171 Aldehyde dehydrogenase family Vp2S01_1381 PF01266 FAD dependent oxidoreductase Vp2S01_1382 PF00795 Carbon-nitrogen hydrolase Vp2S01_1383 PF04371 Porphyromonas-type peptidyl-arginine deiminase Vp2S01_1384 PF00171 Aldehyde dehydrogenase family Vp2S01_1385 PF00202 Aminotransferase class-III Vp2S01_1386 PF02833 DHHA2 domain Vp2S01_1386 PF01368 DHH family Vp2S01_1387 PF00563 EAL domain Vp2S01_1387 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_1390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_1390 PF01411 tRNA synthetases class II (A) Vp2S01_1390 PF02272 DHHA1 domain Vp2S01_1391 PF12833 Helix-turn-helix domain Vp2S01_1393 PF01047 MarR family Vp2S01_1394 PF04237 YjbR Vp2S01_1396 PF01928 CYTH domain Vp2S01_1398 PF12464 Maltose acetyltransferase Vp2S01_1398 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_1401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1401 PF01627 Hpt domain Vp2S01_1401 PF00672 HAMP domain Vp2S01_1401 PF00072 Response regulator receiver domain Vp2S01_1401 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1401 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vp2S01_1402 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_1402 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1402 PF00563 EAL domain Vp2S01_1406 PF04204 Homoserine O-succinyltransferase Vp2S01_1408 PF13520 Amino acid permease Vp2S01_1410 PF03279 Bacterial lipid A biosynthesis acyltransferase Vp2S01_1411 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Vp2S01_1412 PF01810 LysE type translocator Vp2S01_1414 PF01235 Sodium:alanine symporter family Vp2S01_1419 PF00884 Sulfatase Vp2S01_1420 PF08521 Two-component sensor kinase N-terminal Vp2S01_1420 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1421 PF00072 Response regulator receiver domain Vp2S01_1421 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_1425 PF00501 AMP-binding enzyme Vp2S01_1427 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vp2S01_1428 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1429 PF00005 ABC transporter Vp2S01_1429 PF00571 CBS domain Vp2S01_1432 PF02028 BCCT, betaine/carnitine/choline family transporter Vp2S01_1433 PF00583 Acetyltransferase (GNAT) family Vp2S01_1434 PF00202 Aminotransferase class-III Vp2S01_1435 PF06339 Ectoine synthase Vp2S01_1436 PF13840 ACT domain Vp2S01_1436 PF00696 Amino acid kinase family Vp2S01_1439 PF03150 Di-haem cytochrome c peroxidase Vp2S01_1439 PF00034 Cytochrome c Vp2S01_1442 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_1444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1444 PF00989 PAS fold Vp2S01_1444 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Vp2S01_1444 PF17203 Single cache domain 3 Vp2S01_1445 PF00072 Response regulator receiver domain Vp2S01_1445 PF12431 Transcriptional regulator Vp2S01_1446 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Vp2S01_1446 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Vp2S01_1447 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vp2S01_1448 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vp2S01_1448 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Vp2S01_1452 PF00158 Sigma-54 interaction domain Vp2S01_1452 PF01590 GAF domain Vp2S01_1452 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1453 PF00171 Aldehyde dehydrogenase family Vp2S01_1457 PF12833 Helix-turn-helix domain Vp2S01_1461 PF16693 Inner membrane component of T3SS, periplasmic domain Vp2S01_1461 PF16697 Inner membrane component of T3SS, cytoplasmic domain Vp2S01_1463 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Vp2S01_1464 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) Vp2S01_1466 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI Vp2S01_1467 PF01514 Secretory protein of YscJ/FliF family Vp2S01_1469 PF02108 Flagellar assembly protein FliH Vp2S01_1471 PF02661 Fic/DOC family Vp2S01_1477 PF12146 Serine aminopeptidase, S33 Vp2S01_1478 PF12146 Serine aminopeptidase, S33 Vp2S01_1479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1479 PF03466 LysR substrate binding domain Vp2S01_1480 PF01312 FlhB HrpN YscU SpaS Family Vp2S01_1481 PF01311 Bacterial export proteins, family 1 Vp2S01_1482 PF01313 Bacterial export proteins, family 3 Vp2S01_1483 PF00813 FliP family Vp2S01_1484 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vp2S01_1487 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_1487 PF18269 T3SS EscN ATPase C-terminal domain Vp2S01_1487 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vp2S01_1488 PF07201 HrpJ-like domain Vp2S01_1489 PF09059 TyeA Vp2S01_1493 PF00771 FHIPEP family Vp2S01_1494 PF09621 Type III secretion system regulator (LcrR) Vp2S01_1495 PF07216 LcrG protein Vp2S01_1496 PF04792 V antigen (LcrV) protein Vp2S01_1497 PF07720 Tetratricopeptide repeat Vp2S01_1499 PF05844 YopD protein Vp2S01_1501 PF01925 Sulfite exporter TauE/SafE Vp2S01_1502 PF01970 Tripartite tricarboxylate transporter TctA family Vp2S01_1509 PF00285 Citrate synthase, C-terminal domain Vp2S01_1510 PF00694 Aconitase C-terminal domain Vp2S01_1510 PF00330 Aconitase family (aconitate hydratase) Vp2S01_1511 PF04303 PrpF protein Vp2S01_1512 PF00501 AMP-binding enzyme Vp2S01_1512 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_1512 PF16177 Acetyl-coenzyme A synthetase N-terminus Vp2S01_1514 PF00089 Trypsin Vp2S01_1517 PF04055 Radical SAM superfamily Vp2S01_1518 PF06508 Queuosine biosynthesis protein QueC Vp2S01_1519 PF17158 Membrane-associated sensor, integral membrane domain Vp2S01_1519 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1521 PF00691 OmpA family Vp2S01_1521 PF05736 OprF membrane domain Vp2S01_1524 PF00691 OmpA family Vp2S01_1524 PF05736 OprF membrane domain Vp2S01_1527 PF10672 S-adenosylmethionine-dependent methyltransferase Vp2S01_1527 PF17785 PUA-like domain Vp2S01_1529 PF00672 HAMP domain Vp2S01_1529 PF02743 Cache domain Vp2S01_1529 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1531 PF00708 Acylphosphatase Vp2S01_1532 PF04358 DsrC like protein Vp2S01_1534 PF01027 Inhibitor of apoptosis-promoting Bax1 Vp2S01_1535 PF00005 ABC transporter Vp2S01_1536 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1537 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1538 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_1539 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vp2S01_1539 PF14824 Sirohaem biosynthesis protein central Vp2S01_1539 PF10414 Sirohaem synthase dimerisation region Vp2S01_1540 PF04461 Protein of unknown function (DUF520) Vp2S01_1541 PF00793 DAHP synthetase I family Vp2S01_1545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Vp2S01_1545 PF01189 16S rRNA methyltransferase RsmB/F Vp2S01_1545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Vp2S01_1546 PF02470 MlaD protein Vp2S01_1547 PF04403 Paraquat-inducible protein A Vp2S01_1548 PF00005 ABC transporter Vp2S01_1548 PF00664 ABC transporter transmembrane region Vp2S01_1549 PF13185 GAF domain Vp2S01_1550 PF04352 ProQ/FINO family Vp2S01_1550 PF17516 ProQ C-terminal domain Vp2S01_1551 PF03572 Peptidase family S41 Vp2S01_1551 PF17804 Tail specific protease N-terminal domain Vp2S01_1551 PF11818 C-terminal domain of tail specific protease (DUF3340) Vp2S01_1551 PF00595 PDZ domain Vp2S01_1553 PF01433 Peptidase family M1 domain Vp2S01_1553 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Vp2S01_1553 PF11940 Domain of unknown function (DUF3458) Ig-like fold Vp2S01_1554 PF05088 Bacterial NAD-glutamate dehydrogenase Vp2S01_1555 PF01180 Dihydroorotate dehydrogenase Vp2S01_1556 PF07126 Cell-division protein ZapC Vp2S01_1557 PF10672 S-adenosylmethionine-dependent methyltransferase Vp2S01_1557 PF01170 Putative RNA methylase family UPF0020 Vp2S01_1557 PF02926 THUMP domain Vp2S01_1561 PF07977 FabA-like domain Vp2S01_1562 PF05362 Lon protease (S16) C-terminal proteolytic domain Vp2S01_1562 PF13654 AAA domain Vp2S01_1563 PF06303 MatP N-terminal domain Vp2S01_1563 PF17414 MatP C-terminal ribbon-helix-helix domain Vp2S01_1571 PF09308 LuxQ, periplasmic Vp2S01_1571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1571 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1571 PF00072 Response regulator receiver domain Vp2S01_1574 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vp2S01_1577 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Vp2S01_1577 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vp2S01_1579 PF00403 Heavy-metal-associated domain Vp2S01_1582 PF13545 Crp-like helix-turn-helix domain Vp2S01_1582 PF00027 Cyclic nucleotide-binding domain Vp2S01_1583 PF00582 Universal stress protein family Vp2S01_1584 PF01171 PP-loop family Vp2S01_1588 PF00005 ABC transporter Vp2S01_1588 PF08402 TOBE domain Vp2S01_1589 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1590 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1591 PF13416 Bacterial extracellular solute-binding protein Vp2S01_1592 PF13416 Bacterial extracellular solute-binding protein Vp2S01_1593 PF02146 Sir2 family Vp2S01_1595 PF00909 Ammonium Transporter Family Vp2S01_1601 PF13247 4Fe-4S dicluster domain Vp2S01_1602 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1602 PF01568 Molydopterin dinucleotide binding domain Vp2S01_1602 PF00384 Molybdopterin oxidoreductase Vp2S01_1604 PF02613 Nitrate reductase delta subunit Vp2S01_1608 PF02634 FdhD/NarQ family Vp2S01_1609 PF12848 ABC transporter Vp2S01_1609 PF00005 ABC transporter Vp2S01_1610 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1611 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1611 PF00072 Response regulator receiver domain Vp2S01_1611 PF00158 Sigma-54 interaction domain Vp2S01_1612 PF12849 PBP superfamily domain Vp2S01_1613 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1614 PF00005 ABC transporter Vp2S01_1614 PF08402 TOBE domain Vp2S01_1615 PF12804 MobA-like NTP transferase domain Vp2S01_1616 PF03454 MoeA C-terminal region (domain IV) Vp2S01_1616 PF00994 Probable molybdopterin binding domain Vp2S01_1616 PF03453 MoeA N-terminal region (domain I and II) Vp2S01_1618 PF00480 ROK family Vp2S01_1626 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1626 PF00672 HAMP domain Vp2S01_1626 PF02743 Cache domain Vp2S01_1627 PF00877 NlpC/P60 family Vp2S01_1629 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1629 PF05230 MASE2 domain Vp2S01_1630 PF00072 Response regulator receiver domain Vp2S01_1630 PF01339 CheB methylesterase Vp2S01_1633 PF00677 Lumazine binding domain Vp2S01_1634 PF01554 MatE Vp2S01_1636 PF14743 DNA ligase OB-like domain Vp2S01_1636 PF01068 ATP dependent DNA ligase domain Vp2S01_1637 PF01740 STAS domain Vp2S01_1639 PF02563 Polysaccharide biosynthesis/export protein Vp2S01_1639 PF10531 SLBB domain Vp2S01_1642 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1642 PF00072 Response regulator receiver domain Vp2S01_1642 PF00158 Sigma-54 interaction domain Vp2S01_1643 PF13439 Glycosyltransferase Family 4 Vp2S01_1643 PF00534 Glycosyl transferases group 1 Vp2S01_1644 PF00534 Glycosyl transferases group 1 Vp2S01_1644 PF13439 Glycosyltransferase Family 4 Vp2S01_1650 PF00534 Glycosyl transferases group 1 Vp2S01_1650 PF13439 Glycosyltransferase Family 4 Vp2S01_1651 PF00535 Glycosyl transferase family 2 Vp2S01_1652 PF02397 Bacterial sugar transferase Vp2S01_1654 PF02028 BCCT, betaine/carnitine/choline family transporter Vp2S01_1657 PF00270 DEAD/DEAH box helicase Vp2S01_1657 PF11898 Domain of unknown function (DUF3418) Vp2S01_1657 PF04408 Helicase associated domain (HA2) Vp2S01_1657 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Vp2S01_1657 PF00271 Helicase conserved C-terminal domain Vp2S01_1658 PF02525 Flavodoxin-like fold Vp2S01_1660 PF02613 Nitrate reductase delta subunit Vp2S01_1661 PF04976 DMSO reductase anchor subunit (DmsC) Vp2S01_1662 PF13247 4Fe-4S dicluster domain Vp2S01_1662 PF12800 4Fe-4S binding domain Vp2S01_1663 PF01568 Molydopterin dinucleotide binding domain Vp2S01_1663 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1663 PF00384 Molybdopterin oxidoreductase Vp2S01_1669 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1669 PF17151 Periplasmic sensor domain Vp2S01_1671 PF00012 Hsp70 protein Vp2S01_1672 PF00012 Hsp70 protein Vp2S01_1677 PF00664 ABC transporter transmembrane region Vp2S01_1677 PF00005 ABC transporter Vp2S01_1678 PF00664 ABC transporter transmembrane region Vp2S01_1678 PF00005 ABC transporter Vp2S01_1682 PF03222 Tryptophan/tyrosine permease family Vp2S01_1683 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_1685 PF01966 HD domain Vp2S01_1709 PF00069 Protein kinase domain Vp2S01_1714 PF04717 Type VI secretion system, phage-baseplate injector Vp2S01_1715 PF05638 Type VI secretion system effector, Hcp Vp2S01_1716 PF17871 AAA lid domain Vp2S01_1716 PF10431 C-terminal, D2-small domain, of ClpB protein Vp2S01_1716 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_1716 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_1717 PF00158 Sigma-54 interaction domain Vp2S01_1717 PF00072 Response regulator receiver domain Vp2S01_1717 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1722 PF01476 LysM domain Vp2S01_1722 PF01551 Peptidase family M23 Vp2S01_1722 PF08525 Opacity-associated protein A N-terminal motif Vp2S01_1723 PF03741 Integral membrane protein TerC family Vp2S01_1725 PF04055 Radical SAM superfamily Vp2S01_1726 PF11230 Protein of unknown function (DUF3029) Vp2S01_1727 PF01810 LysE type translocator Vp2S01_1728 PF01966 HD domain Vp2S01_1728 PF11871 Domain of unknown function (DUF3391) Vp2S01_1729 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_1729 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1729 PF00563 EAL domain Vp2S01_1730 PF00072 Response regulator receiver domain Vp2S01_1730 PF00158 Sigma-54 interaction domain Vp2S01_1730 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1731 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_1731 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1732 PF00939 Sodium:sulfate symporter transmembrane region Vp2S01_1736 PF00300 Histidine phosphatase superfamily (branch 1) Vp2S01_1740 PF03466 LysR substrate binding domain Vp2S01_1740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1741 PF08543 Phosphomethylpyrimidine kinase Vp2S01_1744 PF13533 Biotin-lipoyl like Vp2S01_1756 PF18255 DNA processing protein A sterile alpha motif domain Vp2S01_1756 PF02481 DNA recombination-mediator protein A Vp2S01_1783 PF04466 Phage terminase large subunit Vp2S01_1783 PF17288 Terminase RNAseH like domain Vp2S01_1787 PF07411 Domain of unknown function (DUF1508) Vp2S01_1806 PF00717 Peptidase S24-like Vp2S01_1806 PF01381 Helix-turn-helix Vp2S01_1815 PF14497 Glutathione S-transferase, C-terminal domain Vp2S01_1815 PF02798 Glutathione S-transferase, N-terminal domain Vp2S01_1817 PF04209 homogentisate 1,2-dioxygenase Vp2S01_1818 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_1819 PF07687 Peptidase dimerisation domain Vp2S01_1819 PF01546 Peptidase family M20/M25/M40 Vp2S01_1820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_1821 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1822 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1822 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_1823 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_1823 PF00005 ABC transporter Vp2S01_1824 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_1824 PF00005 ABC transporter Vp2S01_1826 PF01752 Collagenase Vp2S01_1826 PF08453 Peptidase family M9 N-terminal Vp2S01_1829 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1830 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1831 PF00005 ABC transporter Vp2S01_1831 PF08402 TOBE domain Vp2S01_1832 PF00701 Dihydrodipicolinate synthetase family Vp2S01_1833 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vp2S01_1836 PF05544 Proline racemase Vp2S01_1837 PF00171 Aldehyde dehydrogenase family Vp2S01_1838 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_1842 PF05971 RNA methyltransferase Vp2S01_1843 PF01863 Protein of unknown function DUF45 Vp2S01_1845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_1845 PF03466 LysR substrate binding domain Vp2S01_1849 PF00005 ABC transporter Vp2S01_1850 PF01032 FecCD transport family Vp2S01_1851 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Vp2S01_1854 PF00300 Histidine phosphatase superfamily (branch 1) Vp2S01_1855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Vp2S01_1856 PF02654 Cobalamin-5-phosphate synthase Vp2S01_1857 PF02277 Phosphoribosyltransferase Vp2S01_1859 PF13460 NAD(P)H-binding Vp2S01_1861 PF08411 Exonuclease C-terminal Vp2S01_1861 PF00929 Exonuclease Vp2S01_1862 PF03788 LrgA family Vp2S01_1863 PF04172 LrgB-like family Vp2S01_1864 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vp2S01_1864 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region Vp2S01_1865 PF02222 ATP-grasp domain Vp2S01_1866 PF05724 Thiopurine S-methyltransferase (TPMT) Vp2S01_1868 PF00216 Bacterial DNA-binding protein Vp2S01_1870 PF03484 tRNA synthetase B5 domain Vp2S01_1870 PF03147 Ferredoxin-fold anticodon binding domain Vp2S01_1870 PF03483 B3/4 domain Vp2S01_1870 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Vp2S01_1870 PF01588 Putative tRNA binding domain Vp2S01_1871 PF01409 tRNA synthetases class II core domain (F) Vp2S01_1871 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Vp2S01_1872 PF17158 Membrane-associated sensor, integral membrane domain Vp2S01_1872 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1878 PF01906 Putative heavy-metal-binding Vp2S01_1879 PF00453 Ribosomal protein L20 Vp2S01_1880 PF01632 Ribosomal protein L35 Vp2S01_1881 PF00707 Translation initiation factor IF-3, C-terminal domain Vp2S01_1881 PF05198 Translation initiation factor IF-3, N-terminal domain Vp2S01_1882 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_1882 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vp2S01_1882 PF02824 TGS domain Vp2S01_1882 PF03129 Anticodon binding domain Vp2S01_1885 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_1885 PF07702 UTRA domain Vp2S01_1886 PF01979 Amidohydrolase family Vp2S01_1887 PF00491 Arginase family Vp2S01_1888 PF17392 Urocanase C-terminal domain Vp2S01_1888 PF01175 Urocanase Rossmann-like domain Vp2S01_1888 PF17391 Urocanase N-terminal domain Vp2S01_1889 PF00221 Aromatic amino acid lyase Vp2S01_1891 PF04191 Phospholipid methyltransferase Vp2S01_1892 PF02913 FAD linked oxidases, C-terminal domain Vp2S01_1892 PF13183 4Fe-4S dicluster domain Vp2S01_1892 PF01565 FAD binding domain Vp2S01_1895 PF00691 OmpA family Vp2S01_1895 PF05736 OprF membrane domain Vp2S01_1899 PF01259 SAICAR synthetase Vp2S01_1900 PF09423 PhoD-like phosphatase Vp2S01_1900 PF16655 PhoD-like phosphatase, N-terminal domain Vp2S01_1902 PF02253 Phospholipase A1 Vp2S01_1903 PF08482 ATP-dependent helicase C-terminal Vp2S01_1903 PF04408 Helicase associated domain (HA2) Vp2S01_1903 PF00270 DEAD/DEAH box helicase Vp2S01_1903 PF00271 Helicase conserved C-terminal domain Vp2S01_1904 PF00390 Malic enzyme, N-terminal domain Vp2S01_1904 PF03949 Malic enzyme, NAD binding domain Vp2S01_1906 PF02698 DUF218 domain Vp2S01_1907 PF00939 Sodium:sulfate symporter transmembrane region Vp2S01_1908 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_1908 PF00072 Response regulator receiver domain Vp2S01_1911 PF00266 Aminotransferase class-V Vp2S01_1913 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_1914 PF00005 ABC transporter Vp2S01_1914 PF00664 ABC transporter transmembrane region Vp2S01_1915 PF00664 ABC transporter transmembrane region Vp2S01_1915 PF00005 ABC transporter Vp2S01_1916 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_1917 PF00266 Aminotransferase class-V Vp2S01_1919 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1919 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_1919 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1922 PF04994 TfoX C-terminal domain Vp2S01_1922 PF04993 TfoX N-terminal domain Vp2S01_1925 PF03956 Lysine exporter LysO Vp2S01_1927 PF00282 Pyridoxal-dependent decarboxylase conserved domain Vp2S01_1928 PF01418 Helix-turn-helix domain, rpiR family Vp2S01_1928 PF01380 SIS domain Vp2S01_1929 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_1930 PF00462 Glutaredoxin Vp2S01_1931 PF06826 Predicted Permease Membrane Region Vp2S01_1931 PF02080 TrkA-C domain Vp2S01_1932 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vp2S01_1932 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vp2S01_1932 PF07055 Enoyl reductase FAD binding domain Vp2S01_1933 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vp2S01_1933 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vp2S01_1933 PF02770 Acyl-CoA dehydrogenase, middle domain Vp2S01_1933 PF09317 Domain of unknown function (DUF1974) Vp2S01_1934 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_1934 PF16295 Tetracyclin repressor-like, C-terminal domain Vp2S01_1935 PF06965 Na+/H+ antiporter 1 Vp2S01_1938 PF00005 ABC transporter Vp2S01_1939 PF01554 MatE Vp2S01_1940 PF11066 Protein of unknown function (DUF2867) Vp2S01_1940 PF13460 NAD(P)H-binding Vp2S01_1941 PF03264 NapC/NirT cytochrome c family, N-terminal region Vp2S01_1944 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) Vp2S01_1945 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB Vp2S01_1947 PF07690 Major Facilitator Superfamily Vp2S01_1948 PF01479 S4 domain Vp2S01_1948 PF00849 RNA pseudouridylate synthase Vp2S01_1949 PF04851 Type III restriction enzyme, res subunit Vp2S01_1949 PF00271 Helicase conserved C-terminal domain Vp2S01_1951 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_1951 PF00072 Response regulator receiver domain Vp2S01_1952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1952 PF00672 HAMP domain Vp2S01_1952 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1953 PF01386 Ribosomal L25p family Vp2S01_1956 PF00149 Calcineurin-like phosphoesterase Vp2S01_1956 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_1959 PF00072 Response regulator receiver domain Vp2S01_1959 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_1960 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_1960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_1962 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_1962 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vp2S01_1964 PF09335 SNARE associated Golgi protein Vp2S01_1965 PF13416 Bacterial extracellular solute-binding protein Vp2S01_1966 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1967 PF00005 ABC transporter Vp2S01_1968 PF01066 CDP-alcohol phosphatidyltransferase Vp2S01_1970 PF01590 GAF domain Vp2S01_1970 PF00158 Sigma-54 interaction domain Vp2S01_1971 PF03063 Prismane/CO dehydrogenase family Vp2S01_1972 PF00970 Oxidoreductase FAD-binding domain Vp2S01_1972 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_1972 PF00175 Oxidoreductase NAD-binding domain Vp2S01_1974 PF00849 RNA pseudouridylate synthase Vp2S01_1975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_1975 PF00672 HAMP domain Vp2S01_1975 PF12729 Four helix bundle sensory module for signal transduction Vp2S01_1976 PF00209 Sodium:neurotransmitter symporter family Vp2S01_1978 PF13091 PLD-like domain Vp2S01_1978 PF13396 Phospholipase_D-nuclease N-terminal Vp2S01_1979 PF01053 Cys/Met metabolism PLP-dependent enzyme Vp2S01_1980 PF00561 alpha/beta hydrolase fold Vp2S01_1981 PF03280 Proteobacterial lipase chaperone protein Vp2S01_1982 PF03352 Methyladenine glycosylase Vp2S01_1983 PF00873 AcrB/AcrD/AcrF family Vp2S01_1984 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_1985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_1986 PF04024 PspC domain Vp2S01_1987 PF06667 Phage shock protein B Vp2S01_1988 PF04012 PspA/IM30 family Vp2S01_1989 PF00158 Sigma-54 interaction domain Vp2S01_1989 PF02954 Bacterial regulatory protein, Fis family Vp2S01_1990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_1991 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1992 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_1992 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_1993 PF00005 ABC transporter Vp2S01_1993 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_1994 PF00005 ABC transporter Vp2S01_1996 PF02833 DHHA2 domain Vp2S01_1996 PF01368 DHH family Vp2S01_1998 PF16875 Glycosyl hydrolase family 36 N-terminal domain Vp2S01_1998 PF16874 Glycosyl hydrolase family 36 C-terminal domain Vp2S01_1999 PF00384 Molybdopterin oxidoreductase Vp2S01_1999 PF18364 Molybdopterin oxidoreductase N-terminal domain Vp2S01_1999 PF01568 Molydopterin dinucleotide binding domain Vp2S01_2000 PF03264 NapC/NirT cytochrome c family, N-terminal region Vp2S01_2001 PF06796 Periplasmic nitrate reductase protein NapE Vp2S01_2003 PF03649 Uncharacterised protein family (UPF0014) Vp2S01_2005 PF01226 Formate/nitrite transporter Vp2S01_2010 PF02698 DUF218 domain Vp2S01_2011 PF00265 Thymidine kinase Vp2S01_2012 PF01406 tRNA synthetases class I (C) catalytic domain Vp2S01_2012 PF09190 DALR domain Vp2S01_2013 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vp2S01_2014 PF00149 Calcineurin-like phosphoesterase Vp2S01_2015 PF00563 EAL domain Vp2S01_2015 PF08668 HDOD domain Vp2S01_2016 PF02810 SEC-C motif Vp2S01_2017 PF01502 Phosphoribosyl-AMP cyclohydrolase Vp2S01_2017 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Vp2S01_2018 PF00977 Histidine biosynthesis protein Vp2S01_2019 PF00977 Histidine biosynthesis protein Vp2S01_2020 PF00117 Glutamine amidotransferase class-I Vp2S01_2021 PF08645 Polynucleotide kinase 3 phosphatase Vp2S01_2021 PF00475 Imidazoleglycerol-phosphate dehydratase Vp2S01_2022 PF00155 Aminotransferase class I and II Vp2S01_2023 PF00815 Histidinol dehydrogenase Vp2S01_2024 PF08029 HisG, C-terminal domain Vp2S01_2024 PF01634 ATP phosphoribosyltransferase Vp2S01_2025 PF02954 Bacterial regulatory protein, Fis family Vp2S01_2025 PF00158 Sigma-54 interaction domain Vp2S01_2025 PF00072 Response regulator receiver domain Vp2S01_2027 PF03553 Na+/H+ antiporter family Vp2S01_2028 PF00816 H-NS histone family Vp2S01_2029 PF00294 pfkB family carbohydrate kinase Vp2S01_2032 PF04356 Protein of unknown function (DUF489) Vp2S01_2033 PF08328 Adenylosuccinate lyase C-terminal Vp2S01_2033 PF00206 Lyase Vp2S01_2040 PF00106 short chain dehydrogenase Vp2S01_2042 PF01435 Peptidase family M48 Vp2S01_2045 PF08241 Methyltransferase domain Vp2S01_2046 PF00155 Aminotransferase class I and II Vp2S01_2047 PF04055 Radical SAM superfamily Vp2S01_2047 PF06968 Biotin and Thiamin Synthesis associated domain Vp2S01_2048 PF00202 Aminotransferase class-III Vp2S01_2049 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vp2S01_2052 PF02403 Seryl-tRNA synthetase N-terminal domain Vp2S01_2052 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vp2S01_2053 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_2053 PF16193 AAA C-terminal domain Vp2S01_2053 PF12002 MgsA AAA+ ATPase C terminal Vp2S01_2054 PF03548 Outer membrane lipoprotein carrier protein LolA Vp2S01_2055 PF17854 FtsK alpha domain Vp2S01_2055 PF09397 Ftsk gamma domain Vp2S01_2055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Vp2S01_2055 PF01580 FtsK/SpoIIIE family Vp2S01_2056 PF01037 Lrp/AsnC ligand binding domain Vp2S01_2057 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vp2S01_2057 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vp2S01_2059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2059 PF03466 LysR substrate binding domain Vp2S01_2061 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) Vp2S01_2062 PF03372 Endonuclease/Exonuclease/phosphatase family Vp2S01_2064 PF00579 tRNA synthetases class I (W and Y) Vp2S01_2068 PF00873 AcrB/AcrD/AcrF family Vp2S01_2069 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_2069 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_2070 PF12729 Four helix bundle sensory module for signal transduction Vp2S01_2070 PF00672 HAMP domain Vp2S01_2070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_2081 PF06610 L-alanine exporter Vp2S01_2082 PF09308 LuxQ, periplasmic Vp2S01_2082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2082 PF00072 Response regulator receiver domain Vp2S01_2082 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2084 PF03738 Glutathionylspermidine synthase preATP-grasp Vp2S01_2086 PF03994 Domain of Unknown Function (DUF350) Vp2S01_2088 PF02445 Quinolinate synthetase A protein Vp2S01_2089 PF16331 TolA binding protein trimerisation Vp2S01_2089 PF13174 Tetratricopeptide repeat Vp2S01_2090 PF00691 OmpA family Vp2S01_2091 PF04052 TolB amino-terminal domain Vp2S01_2091 PF07676 WD40-like Beta Propeller Repeat Vp2S01_2093 PF02472 Biopolymer transport protein ExbD/TolR Vp2S01_2094 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_2095 PF03061 Thioesterase superfamily Vp2S01_2097 PF02322 Cytochrome bd terminal oxidase subunit II Vp2S01_2098 PF01654 Cytochrome bd terminal oxidase subunit I Vp2S01_2099 PF05491 RuvB C-terminal winged helix domain Vp2S01_2099 PF05496 Holliday junction DNA helicase RuvB P-loop domain Vp2S01_2099 PF17864 RuvB AAA lid domain Vp2S01_2100 PF01330 RuvA N terminal domain Vp2S01_2100 PF07499 RuvA, C-terminal domain Vp2S01_2101 PF00672 HAMP domain Vp2S01_2101 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_2101 PF02203 Tar ligand binding domain homologue Vp2S01_2102 PF02075 Crossover junction endodeoxyribonuclease RuvC Vp2S01_2103 PF02938 GAD domain Vp2S01_2103 PF00152 tRNA synthetases class II (D, K and N) Vp2S01_2103 PF01336 OB-fold nucleic acid binding domain Vp2S01_2104 PF01904 Protein of unknown function DUF72 Vp2S01_2105 PF13649 Methyltransferase domain Vp2S01_2106 PF08003 Protein of unknown function (DUF1698) Vp2S01_2107 PF18030 RimK PreATP-grasp domain Vp2S01_2107 PF08443 RimK-like ATP-grasp domain Vp2S01_2109 PF18030 RimK PreATP-grasp domain Vp2S01_2109 PF08443 RimK-like ATP-grasp domain Vp2S01_2111 PF04310 MukB N-terminal Vp2S01_2111 PF16330 MukB hinge domain Vp2S01_2112 PF04288 MukE-like family Vp2S01_2113 PF03882 MukF winged-helix domain Vp2S01_2113 PF17192 MukF middle domain Vp2S01_2113 PF17193 MukF C-terminal domain Vp2S01_2115 PF02698 DUF218 domain Vp2S01_2116 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2116 PF00072 Response regulator receiver domain Vp2S01_2117 PF02613 Nitrate reductase delta subunit Vp2S01_2118 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_2119 PF04993 TfoX N-terminal domain Vp2S01_2119 PF04994 TfoX C-terminal domain Vp2S01_2123 PF08323 Starch synthase catalytic domain Vp2S01_2123 PF00534 Glycosyl transferases group 1 Vp2S01_2124 PF00483 Nucleotidyl transferase Vp2S01_2125 PF01751 Toprim domain Vp2S01_2125 PF01396 Topoisomerase DNA binding C4 zinc finger Vp2S01_2125 PF08272 Topoisomerase I zinc-ribbon-like Vp2S01_2125 PF01131 DNA topoisomerase Vp2S01_2126 PF10692 Protein of unknown function (DUF2498) Vp2S01_2127 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vp2S01_2129 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Vp2S01_2130 PF04376 Arginine-tRNA-protein transferase, N terminus Vp2S01_2130 PF04377 Arginine-tRNA-protein transferase, C terminus Vp2S01_2131 PF01176 Translation initiation factor 1A / IF-1 Vp2S01_2133 PF17871 AAA lid domain Vp2S01_2133 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_2133 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_2133 PF10431 C-terminal, D2-small domain, of ClpB protein Vp2S01_2133 PF02861 Clp amino terminal domain, pathogenicity island component Vp2S01_2134 PF02617 ATP-dependent Clp protease adaptor protein ClpS Vp2S01_2135 PF00313 'Cold-shock' DNA-binding domain Vp2S01_2136 PF03971 Monomeric isocitrate dehydrogenase Vp2S01_2137 PF00849 RNA pseudouridylate synthase Vp2S01_2138 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vp2S01_2140 PF06733 DEAD_2 Vp2S01_2140 PF13307 Helicase C-terminal domain Vp2S01_2141 PF01925 Sulfite exporter TauE/SafE Vp2S01_2142 PF07445 Primosomal replication protein priC Vp2S01_2143 PF10689 Protein of unknown function (DUF2496) Vp2S01_2144 PF03372 Endonuclease/Exonuclease/phosphatase family Vp2S01_2146 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2147 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2148 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_2149 PF00005 ABC transporter Vp2S01_2152 PF02901 Pyruvate formate lyase-like Vp2S01_2152 PF01228 Glycine radical Vp2S01_2154 PF04055 Radical SAM superfamily Vp2S01_2156 PF03887 YfbU domain Vp2S01_2157 PF08298 PrkA AAA domain Vp2S01_2157 PF06798 PrkA serine protein kinase C-terminal domain Vp2S01_2158 PF04285 Protein of unknown function (DUF444) Vp2S01_2159 PF04293 SpoVR like protein Vp2S01_2160 PF02348 Cytidylyltransferase Vp2S01_2161 PF03966 Trm112p-like protein Vp2S01_2162 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Vp2S01_2163 PF00005 ABC transporter Vp2S01_2163 PF00664 ABC transporter transmembrane region Vp2S01_2164 PF03772 Competence protein Vp2S01_2164 PF13567 Domain of unknown function (DUF4131) Vp2S01_2164 PF00753 Metallo-beta-lactamase superfamily Vp2S01_2166 PF12704 MacB-like periplasmic core domain Vp2S01_2166 PF02687 FtsX-like permease family Vp2S01_2167 PF00005 ABC transporter Vp2S01_2168 PF12704 MacB-like periplasmic core domain Vp2S01_2168 PF02687 FtsX-like permease family Vp2S01_2170 PF03461 TRCF domain Vp2S01_2170 PF00271 Helicase conserved C-terminal domain Vp2S01_2170 PF00270 DEAD/DEAH box helicase Vp2S01_2170 PF02559 CarD-like/TRCF domain Vp2S01_2170 PF17757 UvrB interaction domain Vp2S01_2173 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_2174 PF05728 Uncharacterised protein family (UPF0227) Vp2S01_2176 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vp2S01_2176 PF13036 Peptidoglycan-synthase activator LpoB Vp2S01_2179 PF01230 HIT domain Vp2S01_2180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_2180 PF00672 HAMP domain Vp2S01_2182 PF01048 Phosphorylase superfamily Vp2S01_2183 PF00403 Heavy-metal-associated domain Vp2S01_2184 PF00478 IMP dehydrogenase / GMP reductase domain Vp2S01_2184 PF00571 CBS domain Vp2S01_2186 PF11953 Domain of unknown function (DUF3470) Vp2S01_2186 PF00037 4Fe-4S binding domain Vp2S01_2187 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vp2S01_2187 PF00588 SpoU rRNA Methylase family Vp2S01_2201 PF00350 Dynamin family Vp2S01_2205 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_2205 PF17152 Periplasmic sensor domain Vp2S01_2208 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vp2S01_2209 PF09619 Type III secretion system lipoprotein chaperone (YscW) Vp2S01_2212 PF01037 Lrp/AsnC ligand binding domain Vp2S01_2212 PF13404 AsnC-type helix-turn-helix domain Vp2S01_2213 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_2217 PF00873 AcrB/AcrD/AcrF family Vp2S01_2218 PF13533 Biotin-lipoyl like Vp2S01_2221 PF07690 Major Facilitator Superfamily Vp2S01_2222 PF03601 Conserved hypothetical protein 698 Vp2S01_2224 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_2224 PF00501 AMP-binding enzyme Vp2S01_2225 PF13378 Enolase C-terminal domain-like Vp2S01_2226 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_2227 PF12697 Alpha/beta hydrolase family Vp2S01_2228 PF16582 Middle domain of thiamine pyrophosphate Vp2S01_2228 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vp2S01_2228 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vp2S01_2229 PF00425 chorismate binding enzyme Vp2S01_2230 PF00155 Aminotransferase class I and II Vp2S01_2232 PF13286 Phosphohydrolase-associated domain Vp2S01_2232 PF01966 HD domain Vp2S01_2236 PF13145 PPIC-type PPIASE domain Vp2S01_2237 PF00216 Bacterial DNA-binding protein Vp2S01_2238 PF05362 Lon protease (S16) C-terminal proteolytic domain Vp2S01_2238 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_2238 PF02190 ATP-dependent protease La (LON) substrate-binding domain Vp2S01_2239 PF10431 C-terminal, D2-small domain, of ClpB protein Vp2S01_2239 PF06689 ClpX C4-type zinc finger Vp2S01_2239 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_2240 PF00574 Clp protease Vp2S01_2241 PF05698 Bacterial trigger factor protein (TF) C-terminus Vp2S01_2241 PF05697 Bacterial trigger factor protein (TF) Vp2S01_2241 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_2242 PF02743 Cache domain Vp2S01_2242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2242 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2243 PF02954 Bacterial regulatory protein, Fis family Vp2S01_2243 PF00158 Sigma-54 interaction domain Vp2S01_2243 PF00072 Response regulator receiver domain Vp2S01_2244 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vp2S01_2245 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vp2S01_2246 PF03480 Bacterial extracellular solute-binding protein, family 7 Vp2S01_2247 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Vp2S01_2251 PF02386 Cation transport protein Vp2S01_2252 PF02080 TrkA-C domain Vp2S01_2252 PF02254 TrkA-N domain Vp2S01_2253 PF00270 DEAD/DEAH box helicase Vp2S01_2253 PF00271 Helicase conserved C-terminal domain Vp2S01_2254 PF01595 Cyclin M transmembrane N-terminal domain Vp2S01_2254 PF00571 CBS domain Vp2S01_2254 PF03471 Transporter associated domain Vp2S01_2256 PF04820 Tryptophan halogenase Vp2S01_2261 PF00550 Phosphopantetheine attachment site Vp2S01_2262 PF00550 Phosphopantetheine attachment site Vp2S01_2265 PF07977 FabA-like domain Vp2S01_2266 PF00535 Glycosyl transferase family 2 Vp2S01_2267 PF00221 Aromatic amino acid lyase Vp2S01_2272 PF00109 Beta-ketoacyl synthase, N-terminal domain Vp2S01_2272 PF02801 Beta-ketoacyl synthase, C-terminal domain Vp2S01_2273 PF07977 FabA-like domain Vp2S01_2275 PF00109 Beta-ketoacyl synthase, N-terminal domain Vp2S01_2275 PF02801 Beta-ketoacyl synthase, C-terminal domain Vp2S01_2278 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Vp2S01_2278 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Vp2S01_2279 PF07662 Na+ dependent nucleoside transporter C-terminus Vp2S01_2279 PF07670 Nucleoside recognition Vp2S01_2279 PF01773 Na+ dependent nucleoside transporter N-terminus Vp2S01_2280 PF03466 LysR substrate binding domain Vp2S01_2280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2281 PF13406 Transglycosylase SLT domain Vp2S01_2282 PF05166 YcgL domain Vp2S01_2283 PF05209 Septum formation inhibitor MinC, N-terminal domain Vp2S01_2283 PF03775 Septum formation inhibitor MinC, C-terminal domain Vp2S01_2284 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vp2S01_2285 PF03776 Septum formation topological specificity factor MinE Vp2S01_2286 PF01612 3'-5' exonuclease Vp2S01_2286 PF00570 HRDC domain Vp2S01_2287 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_2287 PF00501 AMP-binding enzyme Vp2S01_2288 PF00561 alpha/beta hydrolase fold Vp2S01_2291 PF00814 Glycoprotease family Vp2S01_2292 PF13307 Helicase C-terminal domain Vp2S01_2292 PF04851 Type III restriction enzyme, res subunit Vp2S01_2293 PF01842 ACT domain Vp2S01_2293 PF00551 Formyl transferase Vp2S01_2294 PF06185 YecM protein Vp2S01_2295 PF03485 Arginyl tRNA synthetase N terminal domain Vp2S01_2295 PF05746 DALR anticodon binding domain Vp2S01_2295 PF00750 tRNA synthetases class I (R) Vp2S01_2298 PF17910 FeoB cytosolic helical domain Vp2S01_2298 PF07664 Ferrous iron transport protein B C terminus Vp2S01_2298 PF02421 Ferrous iron transport protein B Vp2S01_2298 PF07670 Nucleoside recognition Vp2S01_2299 PF04023 FeoA domain Vp2S01_2301 PF12833 Helix-turn-helix domain Vp2S01_2301 PF02311 AraC-like ligand binding domain Vp2S01_2302 PF01297 Zinc-uptake complex component A periplasmic Vp2S01_2303 PF00005 ABC transporter Vp2S01_2304 PF00950 ABC 3 transport family Vp2S01_2305 PF00549 CoA-ligase Vp2S01_2305 PF02629 CoA binding domain Vp2S01_2306 PF00549 CoA-ligase Vp2S01_2306 PF08442 ATP-grasp domain Vp2S01_2307 PF02817 e3 binding domain Vp2S01_2307 PF00364 Biotin-requiring enzyme Vp2S01_2307 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vp2S01_2308 PF16870 2-oxoglutarate dehydrogenase C-terminal Vp2S01_2308 PF00676 Dehydrogenase E1 component Vp2S01_2308 PF02779 Transketolase, pyrimidine binding domain Vp2S01_2308 PF16078 2-oxoglutarate dehydrogenase N-terminus Vp2S01_2309 PF13085 2Fe-2S iron-sulfur cluster binding domain Vp2S01_2310 PF00890 FAD binding domain Vp2S01_2310 PF02910 Fumarate reductase flavoprotein C-term Vp2S01_2311 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vp2S01_2312 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vp2S01_2313 PF00285 Citrate synthase, C-terminal domain Vp2S01_2314 PF01784 NIF3 (NGG1p interacting factor 3) Vp2S01_2316 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vp2S01_2316 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vp2S01_2316 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vp2S01_2316 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vp2S01_2317 PF17206 SeqA protein N-terminal domain Vp2S01_2317 PF03925 SeqA protein C-terminal domain Vp2S01_2318 PF12697 Alpha/beta hydrolase family Vp2S01_2320 PF00258 Flavodoxin Vp2S01_2321 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_2321 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vp2S01_2322 PF01475 Ferric uptake regulator family Vp2S01_2323 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Vp2S01_2323 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vp2S01_2324 PF00367 phosphotransferase system, EIIB Vp2S01_2324 PF02378 Phosphotransferase system, EIIC Vp2S01_2325 PF01979 Amidohydrolase family Vp2S01_2326 PF00480 ROK family Vp2S01_2326 PF01047 MarR family Vp2S01_2327 PF00999 Sodium/hydrogen exchanger family Vp2S01_2327 PF02254 TrkA-N domain Vp2S01_2328 PF00733 Asparagine synthase Vp2S01_2328 PF13537 Glutamine amidotransferase domain Vp2S01_2329 PF02357 Transcription termination factor nusG Vp2S01_2330 PF00854 POT family Vp2S01_2331 PF00762 Ferrochelatase Vp2S01_2332 PF05191 Adenylate kinase, active site lid Vp2S01_2333 PF00183 Hsp90 protein Vp2S01_2333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2334 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2335 PF17323 Trans-membrane regulatory protein ToxS Vp2S01_2338 PF12850 Calcineurin-like phosphoesterase superfamily domain Vp2S01_2341 PF07556 Protein of unknown function (DUF1538) Vp2S01_2342 PF07556 Protein of unknown function (DUF1538) Vp2S01_2343 PF08338 Domain of unknown function (DUF1731) Vp2S01_2343 PF01370 NAD dependent epimerase/dehydratase family Vp2S01_2344 PF00106 short chain dehydrogenase Vp2S01_2345 PF00085 Thioredoxin Vp2S01_2346 PF16200 C-terminal region of band_7 Vp2S01_2346 PF01145 SPFH domain / Band 7 family Vp2S01_2348 PF03573 outer membrane porin, OprD family Vp2S01_2349 PF00533 BRCA1 C Terminus (BRCT) domain Vp2S01_2349 PF03120 NAD-dependent DNA ligase OB-fold domain Vp2S01_2349 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Vp2S01_2349 PF01653 NAD-dependent DNA ligase adenylation domain Vp2S01_2349 PF12826 Helix-hairpin-helix motif Vp2S01_2350 PF04354 ZipA, C-terminal FtsZ-binding domain Vp2S01_2352 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_2353 PF00381 PTS HPr component phosphorylation site Vp2S01_2354 PF05524 PEP-utilising enzyme, N-terminal Vp2S01_2354 PF02896 PEP-utilising enzyme, TIM barrel domain Vp2S01_2354 PF00391 PEP-utilising enzyme, mobile domain Vp2S01_2355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vp2S01_2356 PF07196 Flagellin hook IN motif Vp2S01_2356 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_2356 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_2357 PF07196 Flagellin hook IN motif Vp2S01_2357 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_2357 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_2358 PF07196 Flagellin hook IN motif Vp2S01_2358 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_2358 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_2360 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_2361 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_2361 PF07196 Flagellin hook IN motif Vp2S01_2362 PF10135 Rod binding protein Vp2S01_2362 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vp2S01_2363 PF02119 Flagellar P-ring protein Vp2S01_2364 PF02107 Flagellar L-ring protein Vp2S01_2365 PF00460 Flagella basal body rod protein Vp2S01_2365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_2366 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_2366 PF00460 Flagella basal body rod protein Vp2S01_2368 PF00460 Flagella basal body rod protein Vp2S01_2368 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_2368 PF07559 Flagellar basal body protein FlaE Vp2S01_2369 PF03963 Flagellar hook capping protein - N-terminal region Vp2S01_2369 PF13860 FlgD Ig-like domain Vp2S01_2369 PF13861 FlgD Tudor-like domain Vp2S01_2370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_2370 PF00460 Flagella basal body rod protein Vp2S01_2371 PF00460 Flagella basal body rod protein Vp2S01_2372 PF03705 CheR methyltransferase, all-alpha domain Vp2S01_2372 PF01739 CheR methyltransferase, SAM binding domain Vp2S01_2373 PF01584 CheW-like domain Vp2S01_2373 PF00072 Response regulator receiver domain Vp2S01_2382 PF00691 OmpA family Vp2S01_2382 PF01389 OmpA-like transmembrane domain Vp2S01_2383 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vp2S01_2384 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vp2S01_2385 PF13609 Gram-negative porin Vp2S01_2387 PF00403 Heavy-metal-associated domain Vp2S01_2390 PF02838 Glycosyl hydrolase family 20, domain 2 Vp2S01_2390 PF00728 Glycosyl hydrolase family 20, catalytic domain Vp2S01_2390 PF03173 Putative carbohydrate binding domain Vp2S01_2390 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain Vp2S01_2393 PF01713 Smr domain Vp2S01_2394 PF01479 S4 domain Vp2S01_2394 PF00849 RNA pseudouridylate synthase Vp2S01_2395 PF04073 Aminoacyl-tRNA editing domain Vp2S01_2396 PF00149 Calcineurin-like phosphoesterase Vp2S01_2396 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_2397 PF00793 DAHP synthetase I family Vp2S01_2398 PF13369 Transglutaminase-like superfamily Vp2S01_2399 PF04247 Invasion gene expression up-regulator, SirB Vp2S01_2400 PF13847 Methyltransferase domain Vp2S01_2400 PF17827 PrmC N-terminal domain Vp2S01_2401 PF00472 RF-1 domain Vp2S01_2401 PF03462 PCRF domain Vp2S01_2402 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Vp2S01_2402 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Vp2S01_2402 PF01488 Shikimate / quinate 5-dehydrogenase Vp2S01_2403 PF03550 Outer membrane lipoprotein LolB Vp2S01_2404 PF08544 GHMP kinases C terminal Vp2S01_2404 PF00288 GHMP kinases N terminal domain Vp2S01_2405 PF14572 Phosphoribosyl synthetase-associated domain Vp2S01_2405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Vp2S01_2406 PF01195 Peptidyl-tRNA hydrolase Vp2S01_2407 PF06071 Protein of unknown function (DUF933) Vp2S01_2407 PF01926 50S ribosome-binding GTPase Vp2S01_2410 PF01494 FAD binding domain Vp2S01_2411 PF00919 Uncharacterized protein family UPF0004 Vp2S01_2411 PF04055 Radical SAM superfamily Vp2S01_2411 PF01938 TRAM domain Vp2S01_2412 PF02562 PhoH-like protein Vp2S01_2413 PF02130 Uncharacterized protein family UPF0054 Vp2S01_2414 PF00571 CBS domain Vp2S01_2414 PF03471 Transporter associated domain Vp2S01_2415 PF00795 Carbon-nitrogen hydrolase Vp2S01_2416 PF07295 Zinc-ribbon containing domain Vp2S01_2417 PF13603 Leucyl-tRNA synthetase, Domain 2 Vp2S01_2417 PF00133 tRNA synthetases class I (I, L, M and V) Vp2S01_2417 PF08264 Anticodon-binding domain of tRNA Vp2S01_2418 PF04390 Lipopolysaccharide-assembly Vp2S01_2419 PF06144 DNA polymerase III, delta subunit Vp2S01_2419 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Vp2S01_2421 PF02590 Predicted SPOUT methyltransferase Vp2S01_2422 PF03717 Penicillin-binding Protein dimerisation domain Vp2S01_2422 PF00905 Penicillin binding protein transpeptidase domain Vp2S01_2423 PF01098 Cell cycle protein Vp2S01_2424 PF03330 Lytic transglycolase Vp2S01_2424 PF05036 Sporulation related domain Vp2S01_2425 PF07943 Penicillin-binding protein 5, C-terminal domain Vp2S01_2425 PF00768 D-alanyl-D-alanine carboxypeptidase Vp2S01_2426 PF04359 Protein of unknown function (DUF493) Vp2S01_2427 PF03099 Biotin/lipoate A/B protein ligase family Vp2S01_2428 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Vp2S01_2428 PF04055 Radical SAM superfamily Vp2S01_2429 PF00464 Serine hydroxymethyltransferase Vp2S01_2430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Vp2S01_2430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Vp2S01_2433 PF00128 Alpha amylase, catalytic domain Vp2S01_2433 PF16657 Maltogenic Amylase, C-terminal domain Vp2S01_2434 PF00367 phosphotransferase system, EIIB Vp2S01_2434 PF02378 Phosphotransferase system, EIIC Vp2S01_2435 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_2438 PF00005 ABC transporter Vp2S01_2438 PF09383 NIL domain Vp2S01_2439 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2440 PF03180 NLPA lipoprotein Vp2S01_2441 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Vp2S01_2442 PF07348 Syd protein (SUKH-2) Vp2S01_2443 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Vp2S01_2443 PF14489 QueF-like protein Vp2S01_2445 PF00072 Response regulator receiver domain Vp2S01_2445 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_2446 PF03641 Possible lysine decarboxylase Vp2S01_2446 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Vp2S01_2446 PF11892 Domain of unknown function (DUF3412) Vp2S01_2447 PF01367 5'-3' exonuclease, C-terminal SAM fold Vp2S01_2447 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vp2S01_2448 PF01223 DNA/RNA non-specific endonuclease Vp2S01_2449 PF01728 FtsJ-like methyltransferase Vp2S01_2449 PF18125 RlmM ferredoxin-like domain Vp2S01_2450 PF04241 Protein of unknown function (DUF423) Vp2S01_2452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2452 PF03466 LysR substrate binding domain Vp2S01_2453 PF02926 THUMP domain Vp2S01_2453 PF02568 Thiamine biosynthesis protein (ThiI) Vp2S01_2455 PF00691 OmpA family Vp2S01_2456 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_2457 PF02609 Exonuclease VII small subunit Vp2S01_2458 PF00348 Polyprenyl synthetase Vp2S01_2459 PF02780 Transketolase, C-terminal domain Vp2S01_2459 PF02779 Transketolase, pyrimidine binding domain Vp2S01_2459 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Vp2S01_2460 PF04608 Phosphatidylglycerophosphatase A Vp2S01_2461 PF00586 AIR synthase related protein, N-terminal domain Vp2S01_2461 PF02769 AIR synthase related protein, C-terminal domain Vp2S01_2462 PF01029 NusB family Vp2S01_2463 PF00885 6,7-dimethyl-8-ribityllumazine synthase Vp2S01_2464 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vp2S01_2464 PF00925 GTP cyclohydrolase II Vp2S01_2465 PF00677 Lumazine binding domain Vp2S01_2466 PF01872 RibD C-terminal domain Vp2S01_2466 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vp2S01_2467 PF03477 ATP cone domain Vp2S01_2468 PF00171 Aldehyde dehydrogenase family Vp2S01_2469 PF01472 PUA domain Vp2S01_2469 PF00696 Amino acid kinase family Vp2S01_2470 PF07417 Sigma factor-binding transcriptional regulator Crl Vp2S01_2472 PF00156 Phosphoribosyl transferase domain Vp2S01_2473 PF00860 Permease family Vp2S01_2474 PF01546 Peptidase family M20/M25/M40 Vp2S01_2474 PF07687 Peptidase dimerisation domain Vp2S01_2479 PF02769 AIR synthase related protein, C-terminal domain Vp2S01_2479 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Vp2S01_2479 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Vp2S01_2480 PF01464 Transglycosylase SLT domain Vp2S01_2480 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_2482 PF14437 MafB19-like deaminase Vp2S01_2483 PF03806 AbgT putative transporter family Vp2S01_2489 PF00114 Pilin (bacterial filament) Vp2S01_2489 PF07963 Prokaryotic N-terminal methylation motif Vp2S01_2490 PF00684 DnaJ central domain Vp2S01_2490 PF01556 DnaJ C terminal domain Vp2S01_2490 PF00226 DnaJ domain Vp2S01_2491 PF00012 Hsp70 protein Vp2S01_2492 PF00375 Sodium:dicarboxylate symporter family Vp2S01_2493 PF01025 GrpE Vp2S01_2494 PF01513 ATP-NAD kinase Vp2S01_2496 PF02463 RecF/RecN/SMC N terminal domain Vp2S01_2497 PF04355 SmpA / OmlA family Vp2S01_2498 PF03658 RnfH family Ubiquitin Vp2S01_2499 PF03364 Polyketide cyclase / dehydrase and lipid transport Vp2S01_2500 PF01668 SmpB protein Vp2S01_2501 PF13356 Arm DNA-binding domain Vp2S01_2501 PF00589 Phage integrase family Vp2S01_2502 PF02384 N-6 DNA Methylase Vp2S01_2502 PF12161 HsdM N-terminal domain Vp2S01_2504 PF18766 SWI2/SNF2 ATPase Vp2S01_2504 PF11867 Domain of unknown function (DUF3387) Vp2S01_2504 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Vp2S01_2506 PF02384 N-6 DNA Methylase Vp2S01_2506 PF12161 HsdM N-terminal domain Vp2S01_2507 PF02384 N-6 DNA Methylase Vp2S01_2510 PF00075 RNase H Vp2S01_2511 PF04002 RadC-like JAB domain Vp2S01_2520 PF00075 RNase H Vp2S01_2523 PF02796 Helix-turn-helix domain of resolvase Vp2S01_2523 PF00239 Resolvase, N terminal domain Vp2S01_2526 PF03466 LysR substrate binding domain Vp2S01_2526 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2527 PF00795 Carbon-nitrogen hydrolase Vp2S01_2527 PF00583 Acetyltransferase (GNAT) family Vp2S01_2531 PF00202 Aminotransferase class-III Vp2S01_2532 PF01053 Cys/Met metabolism PLP-dependent enzyme Vp2S01_2534 PF07969 Amidohydrolase family Vp2S01_2537 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2537 PF03466 LysR substrate binding domain Vp2S01_2538 PF01266 FAD dependent oxidoreductase Vp2S01_2539 PF01235 Sodium:alanine symporter family Vp2S01_2541 PF01184 GPR1/FUN34/yaaH family Vp2S01_2542 PF00704 Glycosyl hydrolases family 18 Vp2S01_2542 PF06483 Chitinase C Vp2S01_2543 PF03553 Na+/H+ antiporter family Vp2S01_2544 PF03553 Na+/H+ antiporter family Vp2S01_2545 PF00958 GMP synthase C terminal domain Vp2S01_2545 PF02540 NAD synthase Vp2S01_2545 PF00117 Glutamine amidotransferase class-I Vp2S01_2546 PF00478 IMP dehydrogenase / GMP reductase domain Vp2S01_2546 PF00571 CBS domain Vp2S01_2547 PF13742 OB-fold nucleic acid binding domain Vp2S01_2547 PF02601 Exonuclease VII, large subunit Vp2S01_2550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vp2S01_2550 PF01926 50S ribosome-binding GTPase Vp2S01_2551 PF13360 PQQ-like domain Vp2S01_2552 PF09976 Tetratricopeptide repeat-like domain Vp2S01_2553 PF13393 Histidyl-tRNA synthetase Vp2S01_2553 PF03129 Anticodon binding domain Vp2S01_2554 PF04551 GcpE protein Vp2S01_2555 PF13464 Domain of unknown function (DUF4115) Vp2S01_2556 PF04055 Radical SAM superfamily Vp2S01_2557 PF00334 Nucleoside diphosphate kinase Vp2S01_2558 PF00883 Cytosol aminopeptidase family, catalytic domain Vp2S01_2558 PF12404 Peptidase Vp2S01_2559 PF04384 Iron-sulphur cluster assembly Vp2S01_2560 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_2561 PF00012 Hsp70 protein Vp2S01_2562 PF07743 HSCB C-terminal oligomerisation domain Vp2S01_2562 PF00226 DnaJ domain Vp2S01_2563 PF01521 Iron-sulphur cluster biosynthesis Vp2S01_2564 PF01592 NifU-like N terminal domain Vp2S01_2565 PF00266 Aminotransferase class-V Vp2S01_2566 PF02082 Transcriptional regulator Vp2S01_2567 PF00588 SpoU rRNA Methylase family Vp2S01_2568 PF00459 Inositol monophosphatase family Vp2S01_2569 PF07549 SecD/SecF GG Motif Vp2S01_2569 PF02355 Protein export membrane protein Vp2S01_2570 PF02355 Protein export membrane protein Vp2S01_2570 PF13721 SecD export protein N-terminal TM region Vp2S01_2570 PF07549 SecD/SecF GG Motif Vp2S01_2571 PF02699 Preprotein translocase subunit Vp2S01_2572 PF01702 Queuine tRNA-ribosyltransferase Vp2S01_2573 PF02547 Queuosine biosynthesis protein Vp2S01_2575 PF00571 CBS domain Vp2S01_2576 PF00463 Isocitrate lyase family Vp2S01_2577 PF01274 Malate synthase Vp2S01_2578 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2578 PF03466 LysR substrate binding domain Vp2S01_2579 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vp2S01_2579 PF00578 AhpC/TSA family Vp2S01_2580 PF03932 CutC family Vp2S01_2581 PF03976 Polyphosphate kinase 2 (PPK2) Vp2S01_2582 PF01895 PhoU domain Vp2S01_2583 PF00005 ABC transporter Vp2S01_2584 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2585 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2586 PF13090 Polyphosphate kinase C-terminal domain 2 Vp2S01_2586 PF02503 Polyphosphate kinase middle domain Vp2S01_2586 PF17941 Polyphosphate kinase C-terminal domain 1 Vp2S01_2586 PF13089 Polyphosphate kinase N-terminal domain Vp2S01_2587 PF02541 Ppx/GppA phosphatase family Vp2S01_2588 PF12849 PBP superfamily domain Vp2S01_2589 PF11808 Phosphate regulon sensor protein PhoR Vp2S01_2589 PF00989 PAS fold Vp2S01_2589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2589 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2590 PF00072 Response regulator receiver domain Vp2S01_2590 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2591 PF04381 Putative exonuclease, RdgC Vp2S01_2593 PF00037 4Fe-4S binding domain Vp2S01_2595 PF03411 Penicillin-insensitive murein endopeptidase Vp2S01_2602 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_2602 PF10431 C-terminal, D2-small domain, of ClpB protein Vp2S01_2602 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_2602 PF17871 AAA lid domain Vp2S01_2602 PF02861 Clp amino terminal domain, pathogenicity island component Vp2S01_2604 PF00849 RNA pseudouridylate synthase Vp2S01_2604 PF01479 S4 domain Vp2S01_2605 PF13525 Outer membrane lipoprotein Vp2S01_2606 PF01464 Transglycosylase SLT domain Vp2S01_2607 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vp2S01_2608 PF01817 Chorismate mutase type II Vp2S01_2608 PF00800 Prephenate dehydratase Vp2S01_2609 PF01931 Protein of unknown function DUF84 Vp2S01_2610 PF01371 Trp repressor protein Vp2S01_2611 PF14718 Soluble lytic murein transglycosylase L domain Vp2S01_2611 PF01464 Transglycosylase SLT domain Vp2S01_2612 PF00005 ABC transporter Vp2S01_2612 PF12848 ABC transporter Vp2S01_2613 PF07238 PilZ domain Vp2S01_2614 PF01551 Peptidase family M23 Vp2S01_2614 PF04225 Opacity-associated protein A LysM-like domain Vp2S01_2615 PF01817 Chorismate mutase type II Vp2S01_2615 PF02153 Prephenate dehydrogenase Vp2S01_2616 PF00793 DAHP synthetase I family Vp2S01_2617 PF00933 Glycosyl hydrolase family 3 N terminal domain Vp2S01_2618 PF03702 Anhydro-N-acetylmuramic acid kinase Vp2S01_2619 PF13580 SIS domain Vp2S01_2622 PF02554 Carbon starvation protein CstA Vp2S01_2623 PF07694 5TMR of 5TMR-LYT Vp2S01_2623 PF06580 Histidine kinase Vp2S01_2624 PF00072 Response regulator receiver domain Vp2S01_2624 PF04397 LytTr DNA-binding domain Vp2S01_2625 PF02401 LytB protein Vp2S01_2626 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_2627 PF01252 Signal peptidase (SPase) II Vp2S01_2628 PF00133 tRNA synthetases class I (I, L, M and V) Vp2S01_2628 PF06827 Zinc finger found in FPG and IleRS Vp2S01_2628 PF08264 Anticodon-binding domain of tRNA Vp2S01_2629 PF06574 FAD synthetase Vp2S01_2629 PF01687 Riboflavin kinase Vp2S01_2630 PF03023 Lipid II flippase MurJ Vp2S01_2631 PF01649 Ribosomal protein S20 Vp2S01_2632 PF01022 Bacterial regulatory protein, arsR family Vp2S01_2633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2633 PF03466 LysR substrate binding domain Vp2S01_2634 PF02690 Na+/Pi-cotransporter Vp2S01_2636 PF00303 Thymidylate synthase Vp2S01_2637 PF01790 Prolipoprotein diacylglyceryl transferase Vp2S01_2638 PF01925 Sulfite exporter TauE/SafE Vp2S01_2639 PF01590 GAF domain Vp2S01_2639 PF05524 PEP-utilising enzyme, N-terminal Vp2S01_2639 PF00391 PEP-utilising enzyme, mobile domain Vp2S01_2639 PF02896 PEP-utilising enzyme, TIM barrel domain Vp2S01_2640 PF00293 NUDIX domain Vp2S01_2641 PF02976 DNA mismatch repair enzyme MutH Vp2S01_2643 PF00248 Aldo/keto reductase family Vp2S01_2645 PF00158 Sigma-54 interaction domain Vp2S01_2645 PF00072 Response regulator receiver domain Vp2S01_2645 PF02954 Bacterial regulatory protein, Fis family Vp2S01_2646 PF01336 OB-fold nucleic acid binding domain Vp2S01_2646 PF00152 tRNA synthetases class II (D, K and N) Vp2S01_2647 PF03462 PCRF domain Vp2S01_2647 PF00472 RF-1 domain Vp2S01_2648 PF01368 DHH family Vp2S01_2648 PF02272 DHHA1 domain Vp2S01_2648 PF17768 RecJ OB domain Vp2S01_2649 PF13098 Thioredoxin-like domain Vp2S01_2649 PF10411 Disulfide bond isomerase protein N-terminus Vp2S01_2650 PF00589 Phage integrase family Vp2S01_2650 PF02899 Phage integrase, N-terminal SAM-like domain Vp2S01_2651 PF00258 Flavodoxin Vp2S01_2652 PF05525 Branched-chain amino acid transport protein Vp2S01_2653 PF05175 Methyltransferase small domain Vp2S01_2654 PF00270 DEAD/DEAH box helicase Vp2S01_2654 PF00271 Helicase conserved C-terminal domain Vp2S01_2655 PF03883 Peroxide stress protein YaaA Vp2S01_2656 PF01235 Sodium:alanine symporter family Vp2S01_2659 PF03167 Uracil DNA glycosylase superfamily Vp2S01_2660 PF01261 Xylose isomerase-like TIM barrel Vp2S01_2661 PF01228 Glycine radical Vp2S01_2662 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_2662 PF14821 Threonine synthase N terminus Vp2S01_2663 PF08544 GHMP kinases C terminal Vp2S01_2663 PF00288 GHMP kinases N terminal domain Vp2S01_2664 PF00742 Homoserine dehydrogenase Vp2S01_2664 PF03447 Homoserine dehydrogenase, NAD binding domain Vp2S01_2664 PF13840 ACT domain Vp2S01_2664 PF01842 ACT domain Vp2S01_2664 PF00696 Amino acid kinase family Vp2S01_2666 PF03737 Aldolase/RraA Vp2S01_2668 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2668 PF00072 Response regulator receiver domain Vp2S01_2670 PF00989 PAS fold Vp2S01_2670 PF18415 Histidine kinase receptor ArcB trans-membrane domain Vp2S01_2670 PF00072 Response regulator receiver domain Vp2S01_2670 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2670 PF01627 Hpt domain Vp2S01_2670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2671 PF00360 Phytochrome region Vp2S01_2671 PF01590 GAF domain Vp2S01_2671 PF00563 EAL domain Vp2S01_2671 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_2672 PF16199 Radical_SAM C-terminal domain Vp2S01_2672 PF04055 Radical SAM superfamily Vp2S01_2673 PF01645 Conserved region in glutamate synthase Vp2S01_2673 PF01493 GXGXG motif Vp2S01_2673 PF00310 Glutamine amidotransferases class-II Vp2S01_2673 PF04898 Glutamate synthase central domain Vp2S01_2674 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_2674 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vp2S01_2675 PF04898 Glutamate synthase central domain Vp2S01_2675 PF01645 Conserved region in glutamate synthase Vp2S01_2675 PF01493 GXGXG motif Vp2S01_2675 PF00310 Glutamine amidotransferases class-II Vp2S01_2676 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_2676 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vp2S01_2678 PF01048 Phosphorylase superfamily Vp2S01_2679 PF17113 Regulatory signalling modulator protein AmpE Vp2S01_2679 PF03186 CobD/Cbib protein Vp2S01_2680 PF01497 Periplasmic binding protein Vp2S01_2681 PF03458 UPF0126 domain Vp2S01_2682 PF01925 Sulfite exporter TauE/SafE Vp2S01_2684 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vp2S01_2684 PF02142 MGS-like domain Vp2S01_2684 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vp2S01_2685 PF00117 Glutamine amidotransferase class-I Vp2S01_2685 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Vp2S01_2686 PF01113 Dihydrodipicolinate reductase, N-terminus Vp2S01_2686 PF05173 Dihydrodipicolinate reductase, C-terminus Vp2S01_2687 PF00293 NUDIX domain Vp2S01_2688 PF01043 SecA preprotein cross-linking domain Vp2S01_2688 PF07516 SecA Wing and Scaffold domain Vp2S01_2688 PF02810 SEC-C motif Vp2S01_2688 PF07517 SecA DEAD-like domain Vp2S01_2690 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Vp2S01_2691 PF12327 FtsZ family, C-terminal domain Vp2S01_2691 PF00091 Tubulin/FtsZ family, GTPase domain Vp2S01_2692 PF02491 SHS2 domain inserted in FTSA Vp2S01_2693 PF08478 POTRA domain, FtsQ-type Vp2S01_2693 PF03799 Cell division protein FtsQ Vp2S01_2694 PF08245 Mur ligase middle domain Vp2S01_2694 PF01225 Mur ligase family, catalytic domain Vp2S01_2694 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_2695 PF04101 Glycosyltransferase family 28 C-terminal domain Vp2S01_2695 PF03033 Glycosyltransferase family 28 N-terminal domain Vp2S01_2696 PF01098 Cell cycle protein Vp2S01_2697 PF08245 Mur ligase middle domain Vp2S01_2697 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_2698 PF00953 Glycosyl transferase family 4 Vp2S01_2698 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Vp2S01_2699 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_2699 PF01225 Mur ligase family, catalytic domain Vp2S01_2699 PF08245 Mur ligase middle domain Vp2S01_2700 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_2700 PF08245 Mur ligase middle domain Vp2S01_2700 PF01225 Mur ligase family, catalytic domain Vp2S01_2701 PF03717 Penicillin-binding Protein dimerisation domain Vp2S01_2701 PF00905 Penicillin binding protein transpeptidase domain Vp2S01_2702 PF04999 Cell division protein FtsL Vp2S01_2703 PF01795 MraW methylase family Vp2S01_2704 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vp2S01_2705 PF04348 LppC putative lipoprotein Vp2S01_2706 PF02021 Uncharacterised protein family UPF0102 Vp2S01_2707 PF13580 SIS domain Vp2S01_2708 PF04972 BON domain Vp2S01_2709 PF04386 Stringent starvation protein B Vp2S01_2710 PF00043 Glutathione S-transferase, C-terminal domain Vp2S01_2710 PF02798 Glutathione S-transferase, N-terminal domain Vp2S01_2711 PF02167 Cytochrome C1 family Vp2S01_2712 PF00032 Cytochrome b(C-terminal)/b6/petD Vp2S01_2712 PF00033 Cytochrome b/b6/petB Vp2S01_2713 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Vp2S01_2713 PF00355 Rieske [2Fe-2S] domain Vp2S01_2714 PF00380 Ribosomal protein S9/S16 Vp2S01_2715 PF00572 Ribosomal protein L13 Vp2S01_2716 PF03969 AFG1-like ATPase Vp2S01_2717 PF06295 Protein of unknown function (DUF1043) Vp2S01_2719 PF00595 PDZ domain Vp2S01_2720 PF13180 PDZ domain Vp2S01_2721 PF03989 DNA gyrase C-terminal domain, beta-propeller Vp2S01_2721 PF00521 DNA gyrase/topoisomerase IV, subunit A Vp2S01_2722 PF00986 DNA gyrase B subunit, carboxyl terminus Vp2S01_2722 PF01751 Toprim domain Vp2S01_2722 PF00204 DNA gyrase B Vp2S01_2722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2723 PF05728 Uncharacterised protein family (UPF0227) Vp2S01_2724 PF00149 Calcineurin-like phosphoesterase Vp2S01_2725 PF06853 Protein of unknown function (DUF1249) Vp2S01_2726 PF00293 NUDIX domain Vp2S01_2727 PF02321 Outer membrane efflux protein Vp2S01_2728 PF01467 Cytidylyltransferase-like Vp2S01_2728 PF00294 pfkB family carbohydrate kinase Vp2S01_2729 PF03710 Glutamate-ammonia ligase adenylyltransferase Vp2S01_2729 PF08335 GlnD PII-uridylyltransferase Vp2S01_2730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_2730 PF00672 HAMP domain Vp2S01_2732 PF01928 CYTH domain Vp2S01_2733 PF01865 Protein of unknown function DUF47 Vp2S01_2734 PF01384 Phosphate transporter family Vp2S01_2735 PF08239 Bacterial SH3 domain Vp2S01_2737 PF01471 Putative peptidoglycan binding domain Vp2S01_2737 PF13401 AAA domain Vp2S01_2738 PF01966 HD domain Vp2S01_2738 PF12627 Probable RNA and SrmB- binding site of polymerase A Vp2S01_2738 PF01743 Poly A polymerase head domain Vp2S01_2739 PF02673 Bacitracin resistance protein BacA Vp2S01_2740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vp2S01_2741 PF02152 Dihydroneopterin aldolase Vp2S01_2742 PF02660 Glycerol-3-phosphate acyltransferase Vp2S01_2743 PF12697 Alpha/beta hydrolase family Vp2S01_2744 PF00814 Glycoprotease family Vp2S01_2745 PF01165 Ribosomal protein S21 Vp2S01_2746 PF09424 Yqey-like protein Vp2S01_2747 PF08278 DNA primase DnaG DnaB-binding Vp2S01_2747 PF08275 DNA primase catalytic core, N-terminal domain Vp2S01_2747 PF01807 CHC2 zinc finger Vp2S01_2747 PF10410 DnaB-helicase binding domain of primase Vp2S01_2748 PF03979 Sigma-70 factor, region 1.1 Vp2S01_2748 PF04546 Sigma-70, non-essential region Vp2S01_2748 PF04545 Sigma-70, region 4 Vp2S01_2748 PF04539 Sigma-70 region 3 Vp2S01_2748 PF04542 Sigma-70 region 2 Vp2S01_2748 PF00140 Sigma-70 factor, region 1.2 Vp2S01_2749 PF03180 NLPA lipoprotein Vp2S01_2756 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vp2S01_2756 PF02378 Phosphotransferase system, EIIC Vp2S01_2756 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_2757 PF01232 Mannitol dehydrogenase Rossmann domain Vp2S01_2757 PF08125 Mannitol dehydrogenase C-terminal domain Vp2S01_2758 PF05068 Mannitol repressor Vp2S01_2759 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_2760 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2760 PF00672 HAMP domain Vp2S01_2760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2761 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2761 PF00072 Response regulator receiver domain Vp2S01_2763 PF01380 SIS domain Vp2S01_2764 PF08220 DeoR-like helix-turn-helix domain Vp2S01_2764 PF00455 DeoR C terminal sensor domain Vp2S01_2765 PF02887 Pyruvate kinase, alpha/beta domain Vp2S01_2765 PF00224 Pyruvate kinase, barrel domain Vp2S01_2767 PF07694 5TMR of 5TMR-LYT Vp2S01_2767 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_2768 PF10369 Small subunit of acetolactate synthase Vp2S01_2769 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vp2S01_2769 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vp2S01_2769 PF00205 Thiamine pyrophosphate enzyme, central domain Vp2S01_2770 PF00501 AMP-binding enzyme Vp2S01_2771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_2771 PF03466 LysR substrate binding domain Vp2S01_2773 PF01569 PAP2 superfamily Vp2S01_2775 PF00682 HMGL-like Vp2S01_2775 PF08502 LeuA allosteric (dimerisation) domain Vp2S01_2776 PF00180 Isocitrate/isopropylmalate dehydrogenase Vp2S01_2777 PF00330 Aconitase family (aconitate hydratase) Vp2S01_2778 PF00694 Aconitase C-terminal domain Vp2S01_2780 PF00226 DnaJ domain Vp2S01_2780 PF05099 Tellurite resistance protein TerB Vp2S01_2781 PF04453 LPS transport system D Vp2S01_2781 PF03968 OstA-like protein Vp2S01_2782 PF09312 SurA N-terminal domain Vp2S01_2783 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Vp2S01_2784 PF00398 Ribosomal RNA adenine dimethylase Vp2S01_2785 PF04379 ApaG domain Vp2S01_2786 PF00149 Calcineurin-like phosphoesterase Vp2S01_2787 PF00186 Dihydrofolate reductase Vp2S01_2788 PF12821 Threonine/Serine exporter, ThrE Vp2S01_2789 PF06738 Putative threonine/serine exporter Vp2S01_2790 PF01926 50S ribosome-binding GTPase Vp2S01_2790 PF01018 GTP1/OBG Vp2S01_2791 PF01016 Ribosomal L27 protein Vp2S01_2792 PF00829 Ribosomal prokaryotic L21 protein Vp2S01_2793 PF00348 Polyprenyl synthetase Vp2S01_2795 PF00056 lactate/malate dehydrogenase, NAD binding domain Vp2S01_2795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Vp2S01_2796 PF02863 Arginine repressor, C-terminal domain Vp2S01_2796 PF01316 Arginine repressor, DNA binding domain Vp2S01_2797 PF16868 NMT1-like family Vp2S01_2801 PF00005 ABC transporter Vp2S01_2802 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2804 PF02441 Flavoprotein Vp2S01_2805 PF01225 Mur ligase family, catalytic domain Vp2S01_2805 PF08245 Mur ligase middle domain Vp2S01_2805 PF02875 Mur ligase family, glutamate ligase domain Vp2S01_2806 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Vp2S01_2807 PF00719 Inorganic pyrophosphatase Vp2S01_2809 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like Vp2S01_2810 PF04357 TamB, inner membrane protein subunit of TAM complex Vp2S01_2811 PF17243 POTRA domain TamA domain 1 Vp2S01_2811 PF01103 Surface antigen Vp2S01_2812 PF01625 Peptide methionine sulfoxide reductase Vp2S01_2813 PF06526 Protein of unknown function (DUF1107) Vp2S01_2814 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Vp2S01_2817 PF00005 ABC transporter Vp2S01_2822 PF03600 Citrate transporter Vp2S01_2822 PF02080 TrkA-C domain Vp2S01_2823 PF00009 Elongation factor Tu GTP binding domain Vp2S01_2824 PF01507 Phosphoadenosine phosphosulfate reductase family Vp2S01_2825 PF14824 Sirohaem biosynthesis protein central Vp2S01_2825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vp2S01_2825 PF10414 Sirohaem synthase dimerisation region Vp2S01_2826 PF00149 Calcineurin-like phosphoesterase Vp2S01_2826 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_2828 PF03880 DbpA RNA binding domain Vp2S01_2828 PF00270 DEAD/DEAH box helicase Vp2S01_2828 PF00271 Helicase conserved C-terminal domain Vp2S01_2829 PF13673 Acetyltransferase (GNAT) domain Vp2S01_2831 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_2831 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vp2S01_2833 PF01196 Ribosomal protein L17 Vp2S01_2834 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Vp2S01_2834 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Vp2S01_2834 PF01000 RNA polymerase Rpb3/RpoA insert domain Vp2S01_2835 PF01479 S4 domain Vp2S01_2835 PF00163 Ribosomal protein S4/S9 N-terminal domain Vp2S01_2836 PF00411 Ribosomal protein S11 Vp2S01_2837 PF00416 Ribosomal protein S13/S18 Vp2S01_2838 PF00444 Ribosomal protein L36 Vp2S01_2839 PF00344 SecY translocase Vp2S01_2840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Vp2S01_2841 PF00327 Ribosomal protein L30p/L7e Vp2S01_2842 PF03719 Ribosomal protein S5, C-terminal domain Vp2S01_2842 PF00333 Ribosomal protein S5, N-terminal domain Vp2S01_2843 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Vp2S01_2844 PF00347 Ribosomal protein L6 Vp2S01_2845 PF00410 Ribosomal protein S8 Vp2S01_2846 PF00253 Ribosomal protein S14p/S29e Vp2S01_2847 PF00281 Ribosomal protein L5 Vp2S01_2847 PF00673 ribosomal L5P family C-terminus Vp2S01_2848 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Vp2S01_2848 PF00467 KOW motif Vp2S01_2849 PF00238 Ribosomal protein L14p/L23e Vp2S01_2850 PF00366 Ribosomal protein S17 Vp2S01_2851 PF00831 Ribosomal L29 protein Vp2S01_2852 PF00252 Ribosomal protein L16p/L10e Vp2S01_2853 PF00189 Ribosomal protein S3, C-terminal domain Vp2S01_2853 PF07650 KH domain Vp2S01_2854 PF00237 Ribosomal protein L22p/L17e Vp2S01_2855 PF00203 Ribosomal protein S19 Vp2S01_2856 PF00181 Ribosomal Proteins L2, RNA binding domain Vp2S01_2856 PF03947 Ribosomal Proteins L2, C-terminal domain Vp2S01_2857 PF00276 Ribosomal protein L23 Vp2S01_2858 PF00573 Ribosomal protein L4/L1 family Vp2S01_2859 PF00297 Ribosomal protein L3 Vp2S01_2860 PF00338 Ribosomal protein S10p/S20e Vp2S01_2861 PF01197 Ribosomal protein L31 Vp2S01_2862 PF18074 Primosomal protein N C-terminal domain Vp2S01_2862 PF17764 3′ DNA-binding domain (3′BD) Vp2S01_2862 PF00271 Helicase conserved C-terminal domain Vp2S01_2862 PF00270 DEAD/DEAH box helicase Vp2S01_2862 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Vp2S01_2863 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_2865 PF00227 Proteasome subunit Vp2S01_2866 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_2866 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_2869 PF04002 RadC-like JAB domain Vp2S01_2875 PF01040 UbiA prenyltransferase family Vp2S01_2876 PF03737 Aldolase/RraA Vp2S01_2877 PF06005 Cell division protein ZapB Vp2S01_2880 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Vp2S01_2881 PF08220 DeoR-like helix-turn-helix domain Vp2S01_2881 PF00455 DeoR C terminal sensor domain Vp2S01_2885 PF00121 Triosephosphate isomerase Vp2S01_2886 PF10996 Beta-Casp domain Vp2S01_2886 PF00753 Metallo-beta-lactamase superfamily Vp2S01_2886 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Vp2S01_2887 PF00483 Nucleotidyl transferase Vp2S01_2888 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Vp2S01_2888 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Vp2S01_2888 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Vp2S01_2889 PF02719 Polysaccharide biosynthesis protein Vp2S01_2890 PF02397 Bacterial sugar transferase Vp2S01_2891 PF01370 NAD dependent epimerase/dehydratase family Vp2S01_2894 PF13439 Glycosyltransferase Family 4 Vp2S01_2895 PF00535 Glycosyl transferase family 2 Vp2S01_2898 PF00535 Glycosyl transferase family 2 Vp2S01_2899 PF12464 Maltose acetyltransferase Vp2S01_2899 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_2900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vp2S01_2901 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vp2S01_2902 PF02719 Polysaccharide biosynthesis protein Vp2S01_2902 PF08485 Polysaccharide biosynthesis protein C-terminal Vp2S01_2911 PF06082 Exopolysaccharide biosynthesis protein YbjH Vp2S01_2912 PF01370 NAD dependent epimerase/dehydratase family Vp2S01_2913 PF03279 Bacterial lipid A biosynthesis acyltransferase Vp2S01_2914 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vp2S01_2915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Vp2S01_2917 PF00534 Glycosyl transferases group 1 Vp2S01_2917 PF13439 Glycosyltransferase Family 4 Vp2S01_2920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vp2S01_2922 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_2923 PF05523 WxcM-like, C-terminal Vp2S01_2924 PF00483 Nucleotidyl transferase Vp2S01_2925 PF16363 GDP-mannose 4,6 dehydratase Vp2S01_2927 PF01219 Prokaryotic diacylglycerol kinase Vp2S01_2928 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vp2S01_2929 PF00535 Glycosyl transferase family 2 Vp2S01_2930 PF13439 Glycosyltransferase Family 4 Vp2S01_2930 PF00534 Glycosyl transferases group 1 Vp2S01_2931 PF01467 Cytidylyltransferase-like Vp2S01_2932 PF05686 Glycosyl transferase family 90 Vp2S01_2933 PF06827 Zinc finger found in FPG and IleRS Vp2S01_2933 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Vp2S01_2933 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Vp2S01_2935 PF00471 Ribosomal protein L33 Vp2S01_2936 PF00830 Ribosomal L28 family Vp2S01_2937 PF04002 RadC-like JAB domain Vp2S01_2938 PF17200 Single Cache domain 2 Vp2S01_2938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_2938 PF00672 HAMP domain Vp2S01_2939 PF04127 DNA / pantothenate metabolism flavoprotein Vp2S01_2939 PF02441 Flavoprotein Vp2S01_2940 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_2941 PF03279 Bacterial lipid A biosynthesis acyltransferase Vp2S01_2942 PF00156 Phosphoribosyl transferase domain Vp2S01_2943 PF03725 3' exoribonuclease family, domain 2 Vp2S01_2943 PF01138 3' exoribonuclease family, domain 1 Vp2S01_2944 PF08340 Domain of unknown function (DUF1732) Vp2S01_2944 PF03755 YicC-like family, N-terminal region Vp2S01_2949 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2951 PF04002 RadC-like JAB domain Vp2S01_2957 PF01320 Colicin immunity protein / pyocin immunity protein Vp2S01_2958 PF06958 S-type Pyocin Vp2S01_2959 PF00075 RNase H Vp2S01_2966 PF00005 ABC transporter Vp2S01_2966 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_2967 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_2967 PF00005 ABC transporter Vp2S01_2968 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_2969 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2969 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_2970 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_2971 PF00593 TonB dependent receptor Vp2S01_2971 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_2974 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_2975 PF02472 Biopolymer transport protein ExbD/TolR Vp2S01_2978 PF00625 Guanylate kinase Vp2S01_2979 PF01192 RNA polymerase Rpb6 Vp2S01_2980 PF04607 Region found in RelA / SpoT proteins Vp2S01_2980 PF13291 ACT domain Vp2S01_2980 PF02824 TGS domain Vp2S01_2981 PF00588 SpoU rRNA Methylase family Vp2S01_2981 PF12105 SpoU, rRNA methylase, C-terminal Vp2S01_2982 PF17191 RecG wedge domain Vp2S01_2982 PF00270 DEAD/DEAH box helicase Vp2S01_2982 PF00271 Helicase conserved C-terminal domain Vp2S01_2984 PF00860 Permease family Vp2S01_2985 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_2985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_2985 PF00672 HAMP domain Vp2S01_2986 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_2986 PF00072 Response regulator receiver domain Vp2S01_2988 PF01272 Transcription elongation factor, GreA/GreB, C-term Vp2S01_2988 PF03449 Transcription elongation factor, N-terminal Vp2S01_2990 PF00575 S1 RNA binding domain Vp2S01_2990 PF17674 HHH domain Vp2S01_2990 PF09371 Tex-like protein N-terminal domain Vp2S01_2990 PF16921 Tex protein YqgF-like domain Vp2S01_2992 PF00561 alpha/beta hydrolase fold Vp2S01_2993 PF00156 Phosphoribosyl transferase domain Vp2S01_2994 PF01521 Iron-sulphur cluster biosynthesis Vp2S01_2994 PF01106 NifU-like domain Vp2S01_2995 PF00293 NUDIX domain Vp2S01_2996 PF00459 Inositol monophosphatase family Vp2S01_2997 PF01203 Type II secretion system (T2SS), protein N Vp2S01_2998 PF04612 Type II secretion system (T2SS), protein M Vp2S01_2999 PF12693 GspL periplasmic domain Vp2S01_2999 PF05134 Type II secretion system (T2SS), protein L Vp2S01_3000 PF03934 Type II secretion system (T2SS), protein K Vp2S01_3001 PF07963 Prokaryotic N-terminal methylation motif Vp2S01_3001 PF11612 Type II secretion system (T2SS), protein J Vp2S01_3002 PF02501 Type II secretion system (T2SS), protein I Vp2S01_3002 PF07963 Prokaryotic N-terminal methylation motif Vp2S01_3003 PF12019 Type II transport protein GspH Vp2S01_3004 PF08334 Type II secretion system (T2SS), protein G Vp2S01_3004 PF07963 Prokaryotic N-terminal methylation motif Vp2S01_3005 PF00482 Type II secretion system (T2SS), protein F Vp2S01_3006 PF00437 Type II/IV secretion system protein Vp2S01_3007 PF03958 Bacterial type II/III secretion system short domain Vp2S01_3007 PF00263 Bacterial type II and III secretion system protein Vp2S01_3008 PF11356 Type II secretion system protein C Vp2S01_3009 PF01479 S4 domain Vp2S01_3010 PF01430 Hsp33 protein Vp2S01_3011 PF01293 Phosphoenolpyruvate carboxykinase Vp2S01_3013 PF00583 Acetyltransferase (GNAT) family Vp2S01_3013 PF09500 Putative thioesterase (yiiD_Cterm) Vp2S01_3014 PF02580 D-Tyr-tRNA(Tyr) deacylase Vp2S01_3015 PF03631 Virulence factor BrkB Vp2S01_3020 PF00120 Glutamine synthetase, catalytic domain Vp2S01_3020 PF03951 Glutamine synthetase, beta-Grasp domain Vp2S01_3022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_3022 PF00989 PAS fold Vp2S01_3022 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_3023 PF02954 Bacterial regulatory protein, Fis family Vp2S01_3023 PF00072 Response regulator receiver domain Vp2S01_3023 PF00158 Sigma-54 interaction domain Vp2S01_3024 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_3024 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_3024 PF00563 EAL domain Vp2S01_3025 PF00962 Adenosine/AMP deaminase Vp2S01_3026 PF04055 Radical SAM superfamily Vp2S01_3026 PF06969 HemN C-terminal domain Vp2S01_3027 PF10675 Protein of unknown function (DUF2489) Vp2S01_3028 PF04220 Der GTPase activator (YihI) Vp2S01_3030 PF00034 Cytochrome c Vp2S01_3031 PF01926 50S ribosome-binding GTPase Vp2S01_3032 PF00476 DNA polymerase family A Vp2S01_3032 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vp2S01_3032 PF01367 5'-3' exonuclease, C-terminal SAM fold Vp2S01_3032 PF01612 3'-5' exonuclease Vp2S01_3034 PF00490 Delta-aminolevulinic acid dehydratase Vp2S01_3035 PF01026 TatD related DNase Vp2S01_3037 PF00902 Sec-independent protein translocase protein (TatC) Vp2S01_3038 PF02416 mttA/Hcf106 family Vp2S01_3039 PF02416 mttA/Hcf106 family Vp2S01_3040 PF03109 ABC1 family Vp2S01_3041 PF02036 SCP-2 sterol transfer family Vp2S01_3042 PF01209 ubiE/COQ5 methyltransferase family Vp2S01_3043 PF02646 RmuC family Vp2S01_3045 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_3045 PF00563 EAL domain Vp2S01_3045 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_3046 PF01594 AI-2E family transporter Vp2S01_3056 PF04972 BON domain Vp2S01_3057 PF00158 Sigma-54 interaction domain Vp2S01_3057 PF02954 Bacterial regulatory protein, Fis family Vp2S01_3057 PF01590 GAF domain Vp2S01_3059 PF10625 Universal stress protein B (UspB) Vp2S01_3060 PF00210 Ferritin-like domain Vp2S01_3061 PF00582 Universal stress protein family Vp2S01_3062 PF00892 EamA-like transporter family Vp2S01_3064 PF04445 Putative SAM-dependent methyltransferase Vp2S01_3065 PF00563 EAL domain Vp2S01_3065 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_3065 PF08448 PAS fold Vp2S01_3066 PF01037 Lrp/AsnC ligand binding domain Vp2S01_3067 PF01432 Peptidase family M3 Vp2S01_3068 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Vp2S01_3069 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_3069 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vp2S01_3070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_3070 PF03466 LysR substrate binding domain Vp2S01_3071 PF01048 Phosphorylase superfamily Vp2S01_3072 PF01081 KDPG and KHG aldolase Vp2S01_3073 PF02447 GntP family permease Vp2S01_3074 PF01202 Shikimate kinase Vp2S01_3075 PF00920 Dehydratase family Vp2S01_3076 PF00893 Small Multidrug Resistance protein Vp2S01_3077 PF00893 Small Multidrug Resistance protein Vp2S01_3078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_3078 PF03466 LysR substrate binding domain Vp2S01_3079 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vp2S01_3079 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_3080 PF00069 Protein kinase domain Vp2S01_3086 PF12911 N-terminal TM domain of oligopeptide transport permease C Vp2S01_3086 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_3088 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_3089 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_3089 PF00005 ABC transporter Vp2S01_3090 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_3091 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vp2S01_3092 PF13361 UvrD-like helicase C-terminal domain Vp2S01_3092 PF00580 UvrD/REP helicase N-terminal domain Vp2S01_3093 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_3093 PF16295 Tetracyclin repressor-like, C-terminal domain Vp2S01_3094 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_3095 PF00873 AcrB/AcrD/AcrF family Vp2S01_3096 PF04380 Membrane fusogenic activity Vp2S01_3097 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Vp2S01_3097 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Vp2S01_3098 PF03466 LysR substrate binding domain Vp2S01_3098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_3102 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_3103 PF07369 Protein of unknown function (DUF1488) Vp2S01_3104 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vp2S01_3104 PF01488 Shikimate / quinate 5-dehydrogenase Vp2S01_3104 PF08501 Shikimate dehydrogenase substrate binding domain Vp2S01_3105 PF01218 Coproporphyrinogen III oxidase Vp2S01_3106 PF01300 Telomere recombination Vp2S01_3107 PF00731 AIR carboxylase Vp2S01_3108 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Vp2S01_3108 PF02222 ATP-grasp domain Vp2S01_3109 PF01396 Topoisomerase DNA binding C4 zinc finger Vp2S01_3111 PF04361 Protein of unknown function (DUF494) Vp2S01_3112 PF17782 DprA winged helix domain Vp2S01_3112 PF02481 DNA recombination-mediator protein A Vp2S01_3114 PF01327 Polypeptide deformylase Vp2S01_3115 PF02911 Formyl transferase, C-terminal domain Vp2S01_3115 PF00551 Formyl transferase Vp2S01_3116 PF01029 NusB family Vp2S01_3116 PF01189 16S rRNA methyltransferase RsmB/F Vp2S01_3117 PF02254 TrkA-N domain Vp2S01_3117 PF02080 TrkA-C domain Vp2S01_3118 PF02386 Cation transport protein Vp2S01_3120 PF03006 Haemolysin-III related Vp2S01_3121 PF07070 SpoOM protein Vp2S01_3124 PF06288 Protein of unknown function (DUF1040) Vp2S01_3125 PF12801 4Fe-4S binding domain Vp2S01_3125 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Vp2S01_3125 PF13746 4Fe-4S dicluster domain Vp2S01_3126 PF01636 Phosphotransferase enzyme family Vp2S01_3127 PF01323 DSBA-like thioredoxin domain Vp2S01_3128 PF01553 Acyltransferase Vp2S01_3130 PF01078 Magnesium chelatase, subunit ChlI Vp2S01_3130 PF13335 Magnesium chelatase, subunit ChlI C-terminal Vp2S01_3131 PF00205 Thiamine pyrophosphate enzyme, central domain Vp2S01_3131 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vp2S01_3131 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vp2S01_3133 PF01063 Amino-transferase class IV Vp2S01_3134 PF00920 Dehydratase family Vp2S01_3135 PF00585 C-terminal regulatory domain of Threonine dehydratase Vp2S01_3135 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_3136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_3136 PF03466 LysR substrate binding domain Vp2S01_3137 PF07690 Major Facilitator Superfamily Vp2S01_3138 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_3139 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_3140 PF12804 MobA-like NTP transferase domain Vp2S01_3140 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_3141 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Vp2S01_3141 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Vp2S01_3142 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_3142 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vp2S01_3143 PF00231 ATP synthase Vp2S01_3144 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vp2S01_3144 PF00306 ATP synthase alpha/beta chain, C terminal domain Vp2S01_3144 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_3145 PF00213 ATP synthase delta (OSCP) subunit Vp2S01_3146 PF00430 ATP synthase B/B' CF(0) Vp2S01_3147 PF00137 ATP synthase subunit C Vp2S01_3148 PF00119 ATP synthase A chain Vp2S01_3149 PF03899 ATP synthase I chain Vp2S01_3150 PF02195 ParB-like nuclease domain Vp2S01_3150 PF17762 HTH domain found in ParB protein Vp2S01_3151 PF13614 AAA domain Vp2S01_3152 PF02527 rRNA small subunit methyltransferase G Vp2S01_3153 PF13932 GidA associated domain Vp2S01_3153 PF01134 Glucose inhibited division protein A Vp2S01_A0004 PF07694 5TMR of 5TMR-LYT Vp2S01_A0004 PF13492 GAF domain Vp2S01_A0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0004 PF06580 Histidine kinase Vp2S01_A0005 PF04397 LytTr DNA-binding domain Vp2S01_A0005 PF00072 Response regulator receiver domain Vp2S01_A0007 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vp2S01_A0008 PF17200 Single Cache domain 2 Vp2S01_A0008 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0008 PF00672 HAMP domain Vp2S01_A0011 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_A0013 PF03616 Sodium/glutamate symporter Vp2S01_A0015 PF00005 ABC transporter Vp2S01_A0016 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A0016 PF00155 Aminotransferase class I and II Vp2S01_A0017 PF03616 Sodium/glutamate symporter Vp2S01_A0019 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vp2S01_A0022 PF03466 LysR substrate binding domain Vp2S01_A0022 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0023 PF02678 Pirin Vp2S01_A0023 PF17954 Quercetinase C-terminal cupin domain Vp2S01_A0024 PF07681 DoxX Vp2S01_A0026 PF00730 HhH-GPD superfamily base excision DNA repair protein Vp2S01_A0026 PF06029 AlkA N-terminal domain Vp2S01_A0027 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vp2S01_A0027 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Vp2S01_A0029 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Vp2S01_A0031 PF03600 Citrate transporter Vp2S01_A0036 PF08329 Chitinase A, N-terminal domain Vp2S01_A0036 PF00704 Glycosyl hydrolases family 18 Vp2S01_A0038 PF06865 Pyrimidine/purine nucleoside phosphorylase Vp2S01_A0040 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0040 PF00563 EAL domain Vp2S01_A0042 PF01554 MatE Vp2S01_A0043 PF00849 RNA pseudouridylate synthase Vp2S01_A0046 PF03466 LysR substrate binding domain Vp2S01_A0046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0049 PF17152 Periplasmic sensor domain Vp2S01_A0049 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0051 PF00756 Putative esterase Vp2S01_A0052 PF00107 Zinc-binding dehydrogenase Vp2S01_A0052 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_A0053 PF00797 N-acetyltransferase Vp2S01_A0054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0054 PF03466 LysR substrate binding domain Vp2S01_A0057 PF09339 IclR helix-turn-helix domain Vp2S01_A0057 PF01614 Bacterial transcriptional regulator Vp2S01_A0059 PF10688 Bacterial inner membrane protein Vp2S01_A0060 PF07883 Cupin domain Vp2S01_A0063 PF00294 pfkB family carbohydrate kinase Vp2S01_A0064 PF01081 KDPG and KHG aldolase Vp2S01_A0067 PF13229 Right handed beta helix region Vp2S01_A0068 PF00474 Sodium:solute symporter family Vp2S01_A0069 PF14583 Oligogalacturonate lyase Vp2S01_A0070 PF04954 Siderophore-interacting protein Vp2S01_A0070 PF08021 Siderophore-interacting FAD-binding domain Vp2S01_A0071 PF01810 LysE type translocator Vp2S01_A0072 PF01037 Lrp/AsnC ligand binding domain Vp2S01_A0073 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading Vp2S01_A0073 PF18416 N-acetylglucosamine binding protein domain 2 Vp2S01_A0076 PF13599 Pentapeptide repeats (9 copies) Vp2S01_A0078 PF03922 OmpW family Vp2S01_A0079 PF13533 Biotin-lipoyl like Vp2S01_A0080 PF07690 Major Facilitator Superfamily Vp2S01_A0082 PF12706 Beta-lactamase superfamily domain Vp2S01_A0084 PF01204 Trehalase Vp2S01_A0085 PF01661 Macro domain Vp2S01_A0086 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_A0087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0087 PF03466 LysR substrate binding domain Vp2S01_A0089 PF03466 LysR substrate binding domain Vp2S01_A0089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0090 PF13186 Iron-sulfur cluster-binding domain Vp2S01_A0090 PF04055 Radical SAM superfamily Vp2S01_A0091 PF00884 Sulfatase Vp2S01_A0092 PF03466 LysR substrate binding domain Vp2S01_A0092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0093 PF03466 LysR substrate binding domain Vp2S01_A0093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0102 PF17853 GGDEF-like domain Vp2S01_A0102 PF13556 PucR C-terminal helix-turn-helix domain Vp2S01_A0102 PF05651 Putative sugar diacid recognition Vp2S01_A0103 PF02447 GntP family permease Vp2S01_A0104 PF02595 Glycerate kinase family Vp2S01_A0105 PF00155 Aminotransferase class I and II Vp2S01_A0105 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A0109 PF00583 Acetyltransferase (GNAT) family Vp2S01_A0114 PF03264 NapC/NirT cytochrome c family, N-terminal region Vp2S01_A0115 PF01568 Molydopterin dinucleotide binding domain Vp2S01_A0115 PF18364 Molybdopterin oxidoreductase N-terminal domain Vp2S01_A0115 PF00384 Molybdopterin oxidoreductase Vp2S01_A0117 PF02581 Thiamine monophosphate synthase Vp2S01_A0118 PF02110 Hydroxyethylthiazole kinase family Vp2S01_A0119 PF03070 TENA/THI-4/PQQC family Vp2S01_A0120 PF09084 NMT1/THI5 like Vp2S01_A0121 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0122 PF00005 ABC transporter Vp2S01_A0123 PF08543 Phosphomethylpyrimidine kinase Vp2S01_A0124 PF01523 Putative modulator of DNA gyrase Vp2S01_A0125 PF01523 Putative modulator of DNA gyrase Vp2S01_A0126 PF04013 Putative SAM-dependent RNA methyltransferase Vp2S01_A0129 PF10928 Protein of unknown function (DUF2810) Vp2S01_A0130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vp2S01_A0130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vp2S01_A0132 PF03009 Glycerophosphoryl diester phosphodiesterase family Vp2S01_A0134 PF00072 Response regulator receiver domain Vp2S01_A0134 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A0135 PF00672 HAMP domain Vp2S01_A0135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0135 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A0135 PF16750 Sensor domain of 2-component histidine kinase Vp2S01_A0136 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A0136 PF00593 TonB dependent receptor Vp2S01_A0138 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_A0139 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_A0140 PF02472 Biopolymer transport protein ExbD/TolR Vp2S01_A0148 PF01297 Zinc-uptake complex component A periplasmic Vp2S01_A0149 PF00005 ABC transporter Vp2S01_A0150 PF00950 ABC 3 transport family Vp2S01_A0153 PF00326 Prolyl oligopeptidase family Vp2S01_A0153 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vp2S01_A0155 PF07690 Major Facilitator Superfamily Vp2S01_A0156 PF00491 Arginase family Vp2S01_A0157 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vp2S01_A0157 PF17944 Arginine decarboxylase C-terminal helical extension Vp2S01_A0157 PF17810 Arginine decarboxylase helical bundle domain Vp2S01_A0158 PF00753 Metallo-beta-lactamase superfamily Vp2S01_A0159 PF18030 RimK PreATP-grasp domain Vp2S01_A0159 PF08443 RimK-like ATP-grasp domain Vp2S01_A0160 PF08443 RimK-like ATP-grasp domain Vp2S01_A0160 PF18030 RimK PreATP-grasp domain Vp2S01_A0163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0163 PF03466 LysR substrate binding domain Vp2S01_A0169 PF00232 Glycosyl hydrolase family 1 Vp2S01_A0171 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0171 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A0172 PF00158 Sigma-54 interaction domain Vp2S01_A0172 PF00072 Response regulator receiver domain Vp2S01_A0172 PF02954 Bacterial regulatory protein, Fis family Vp2S01_A0173 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0173 PF05230 MASE2 domain Vp2S01_A0174 PF05525 Branched-chain amino acid transport protein Vp2S01_A0177 PF01266 FAD dependent oxidoreductase Vp2S01_A0179 PF01212 Beta-eliminating lyase Vp2S01_A0182 PF01773 Na+ dependent nucleoside transporter N-terminus Vp2S01_A0182 PF07662 Na+ dependent nucleoside transporter C-terminus Vp2S01_A0182 PF07670 Nucleoside recognition Vp2S01_A0184 PF13532 2OG-Fe(II) oxygenase superfamily Vp2S01_A0185 PF05230 MASE2 domain Vp2S01_A0185 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0186 PF12729 Four helix bundle sensory module for signal transduction Vp2S01_A0186 PF00672 HAMP domain Vp2S01_A0186 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0189 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0190 PF03441 FAD binding domain of DNA photolyase Vp2S01_A0190 PF00875 DNA photolyase Vp2S01_A0191 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Vp2S01_A0193 PF01641 SelR domain Vp2S01_A0193 PF01625 Peptide methionine sulfoxide reductase Vp2S01_A0194 PF02566 OsmC-like protein Vp2S01_A0195 PF14602 Hexapeptide repeat of succinyl-transferase Vp2S01_A0195 PF12464 Maltose acetyltransferase Vp2S01_A0202 PF03466 LysR substrate binding domain Vp2S01_A0202 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0203 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_A0206 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Vp2S01_A0207 PF00194 Eukaryotic-type carbonic anhydrase Vp2S01_A0208 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vp2S01_A0210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_A0211 PF12704 MacB-like periplasmic core domain Vp2S01_A0211 PF02687 FtsX-like permease family Vp2S01_A0211 PF00005 ABC transporter Vp2S01_A0212 PF02321 Outer membrane efflux protein Vp2S01_A0213 PF00657 GDSL-like Lipase/Acylhydrolase Vp2S01_A0216 PF03611 PTS system sugar-specific permease component Vp2S01_A0218 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_A0219 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_A0220 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_A0222 PF00266 Aminotransferase class-V Vp2S01_A0225 PF00005 ABC transporter Vp2S01_A0226 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0227 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A0227 PF07702 UTRA domain Vp2S01_A0230 PF04393 Protein of unknown function (DUF535) Vp2S01_A0231 PF01266 FAD dependent oxidoreductase Vp2S01_A0232 PF18027 Cytosolic carboxypeptidase N-terminal domain Vp2S01_A0232 PF00246 Zinc carboxypeptidase Vp2S01_A0233 PF01389 OmpA-like transmembrane domain Vp2S01_A0233 PF00691 OmpA family Vp2S01_A0234 PF03466 LysR substrate binding domain Vp2S01_A0234 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0236 PF03466 LysR substrate binding domain Vp2S01_A0236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0238 PF00854 POT family Vp2S01_A0240 PF03315 Serine dehydratase beta chain Vp2S01_A0240 PF03313 Serine dehydratase alpha chain Vp2S01_A0244 PF00133 tRNA synthetases class I (I, L, M and V) Vp2S01_A0244 PF08264 Anticodon-binding domain of tRNA Vp2S01_A0245 PF01464 Transglycosylase SLT domain Vp2S01_A0249 PF00460 Flagella basal body rod protein Vp2S01_A0250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_A0250 PF00460 Flagella basal body rod protein Vp2S01_A0251 PF13860 FlgD Ig-like domain Vp2S01_A0251 PF03963 Flagellar hook capping protein - N-terminal region Vp2S01_A0251 PF13861 FlgD Tudor-like domain Vp2S01_A0252 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_A0252 PF00460 Flagella basal body rod protein Vp2S01_A0252 PF07559 Flagellar basal body protein FlaE Vp2S01_A0253 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_A0253 PF00460 Flagella basal body rod protein Vp2S01_A0254 PF00460 Flagella basal body rod protein Vp2S01_A0254 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_A0255 PF02107 Flagellar L-ring protein Vp2S01_A0256 PF02119 Flagellar P-ring protein Vp2S01_A0257 PF10135 Rod binding protein Vp2S01_A0257 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vp2S01_A0258 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vp2S01_A0258 PF00460 Flagella basal body rod protein Vp2S01_A0259 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_A0264 PF01070 FMN-dependent dehydrogenase Vp2S01_A0270 PF00581 Rhodanese-like domain Vp2S01_A0271 PF00166 Chaperonin 10 Kd subunit Vp2S01_A0272 PF00118 TCP-1/cpn60 chaperonin family Vp2S01_A0275 PF01810 LysE type translocator Vp2S01_A0276 PF03466 LysR substrate binding domain Vp2S01_A0276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0279 PF08359 YsiA-like protein, C-terminal region Vp2S01_A0279 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_A0281 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_A0281 PF00149 Calcineurin-like phosphoesterase Vp2S01_A0282 PF03060 Nitronate monooxygenase Vp2S01_A0285 PF03466 LysR substrate binding domain Vp2S01_A0285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0287 PF01641 SelR domain Vp2S01_A0287 PF01625 Peptide methionine sulfoxide reductase Vp2S01_A0288 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_A0289 PF08220 DeoR-like helix-turn-helix domain Vp2S01_A0289 PF00455 DeoR C terminal sensor domain Vp2S01_A0291 PF06628 Catalase-related immune-responsive Vp2S01_A0291 PF00199 Catalase Vp2S01_A0293 PF00857 Isochorismatase family Vp2S01_A0296 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Vp2S01_A0296 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Vp2S01_A0301 PF03466 LysR substrate binding domain Vp2S01_A0301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0303 PF01389 OmpA-like transmembrane domain Vp2S01_A0303 PF00691 OmpA family Vp2S01_A0305 PF06629 MltA-interacting protein MipA Vp2S01_A0306 PF04170 NlpE N-terminal domain Vp2S01_A0306 PF17185 NlpE C-terminal OB domain Vp2S01_A0307 PF02001 Protein of unknown function DUF134 Vp2S01_A0312 PF00679 Elongation factor G C-terminus Vp2S01_A0312 PF03144 Elongation factor Tu domain 2 Vp2S01_A0312 PF00009 Elongation factor Tu GTP binding domain Vp2S01_A0312 PF03764 Elongation factor G, domain IV Vp2S01_A0312 PF14492 Elongation Factor G, domain II Vp2S01_A0313 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vp2S01_A0313 PF13378 Enolase C-terminal domain-like Vp2S01_A0315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0315 PF03466 LysR substrate binding domain Vp2S01_A0318 PF00376 MerR family regulatory protein Vp2S01_A0318 PF09278 MerR, DNA binding Vp2S01_A0323 PF13091 PLD-like domain Vp2S01_A0324 PF13533 Biotin-lipoyl like Vp2S01_A0325 PF00873 AcrB/AcrD/AcrF family Vp2S01_A0329 PF08402 TOBE domain Vp2S01_A0329 PF00005 ABC transporter Vp2S01_A0334 PF07702 UTRA domain Vp2S01_A0334 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A0335 PF02028 BCCT, betaine/carnitine/choline family transporter Vp2S01_A0336 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vp2S01_A0336 PF00703 Glycosyl hydrolases family 2 Vp2S01_A0336 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vp2S01_A0336 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Vp2S01_A0337 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A0339 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0339 PF07694 5TMR of 5TMR-LYT Vp2S01_A0342 PF00873 AcrB/AcrD/AcrF family Vp2S01_A0343 PF13533 Biotin-lipoyl like Vp2S01_A0344 PF03466 LysR substrate binding domain Vp2S01_A0344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0346 PF13416 Bacterial extracellular solute-binding protein Vp2S01_A0347 PF00579 tRNA synthetases class I (W and Y) Vp2S01_A0351 PF02896 PEP-utilising enzyme, TIM barrel domain Vp2S01_A0351 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Vp2S01_A0351 PF00391 PEP-utilising enzyme, mobile domain Vp2S01_A0352 PF03618 Kinase/pyrophosphorylase Vp2S01_A0353 PF17763 Glutaminase/Asparaginase C-terminal domain Vp2S01_A0353 PF00710 Asparaginase, N-terminal Vp2S01_A0355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0355 PF03466 LysR substrate binding domain Vp2S01_A0359 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) Vp2S01_A0361 PF12833 Helix-turn-helix domain Vp2S01_A0361 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Vp2S01_A0364 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_A0364 PF00107 Zinc-binding dehydrogenase Vp2S01_A0365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vp2S01_A0367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0367 PF03466 LysR substrate binding domain Vp2S01_A0368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0368 PF03466 LysR substrate binding domain Vp2S01_A0370 PF00271 Helicase conserved C-terminal domain Vp2S01_A0370 PF00270 DEAD/DEAH box helicase Vp2S01_A0373 PF00535 Glycosyl transferase family 2 Vp2S01_A0379 PF00155 Aminotransferase class I and II Vp2S01_A0380 PF12833 Helix-turn-helix domain Vp2S01_A0380 PF01497 Periplasmic binding protein Vp2S01_A0386 PF05661 Protein of unknown function (DUF808) Vp2S01_A0387 PF01979 Amidohydrolase family Vp2S01_A0388 PF01679 Proteolipid membrane potential modulator Vp2S01_A0389 PF03476 MOSC N-terminal beta barrel domain Vp2S01_A0389 PF03473 MOSC domain Vp2S01_A0389 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_A0389 PF03476 MOSC N-terminal beta barrel domain Vp2S01_A0389 PF03473 MOSC domain Vp2S01_A0389 PF00111 2Fe-2S iron-sulfur cluster binding domain Vp2S01_A0390 PF02540 NAD synthase Vp2S01_A0391 PF01467 Cytidylyltransferase-like Vp2S01_A0399 PF00005 ABC transporter Vp2S01_A0400 PF01032 FecCD transport family Vp2S01_A0402 PF02472 Biopolymer transport protein ExbD/TolR Vp2S01_A0403 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_A0404 PF03544 Gram-negative bacterial TonB protein C-terminal Vp2S01_A0405 PF04055 Radical SAM superfamily Vp2S01_A0406 PF06228 Haem utilisation ChuX/HutX Vp2S01_A0407 PF01243 Pyridoxamine 5'-phosphate oxidase Vp2S01_A0410 PF01584 CheW-like domain Vp2S01_A0410 PF00072 Response regulator receiver domain Vp2S01_A0413 PF13408 Recombinase zinc beta ribbon domain Vp2S01_A0413 PF00239 Resolvase, N terminal domain Vp2S01_A0413 PF07508 Recombinase Vp2S01_A0415 PF00239 Resolvase, N terminal domain Vp2S01_A0415 PF02796 Helix-turn-helix domain of resolvase Vp2S01_A0418 PF00075 RNase H Vp2S01_A0420 PF03466 LysR substrate binding domain Vp2S01_A0420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0421 PF07690 Major Facilitator Superfamily Vp2S01_A0425 PF05448 Acetyl xylan esterase (AXE1) Vp2S01_A0427 PF00293 NUDIX domain Vp2S01_A0428 PF00082 Subtilase family Vp2S01_A0433 PF00141 Peroxidase Vp2S01_A0434 PF00210 Ferritin-like domain Vp2S01_A0436 PF03466 LysR substrate binding domain Vp2S01_A0436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0440 PF08453 Peptidase family M9 N-terminal Vp2S01_A0440 PF01752 Collagenase Vp2S01_A0440 PF04151 Bacterial pre-peptidase C-terminal domain Vp2S01_A0442 PF00128 Alpha amylase, catalytic domain Vp2S01_A0445 PF00999 Sodium/hydrogen exchanger family Vp2S01_A0445 PF02254 TrkA-N domain Vp2S01_A0446 PF02525 Flavodoxin-like fold Vp2S01_A0447 PF00582 Universal stress protein family Vp2S01_A0448 PF16326 ABC transporter C-terminal domain Vp2S01_A0448 PF12848 ABC transporter Vp2S01_A0448 PF00005 ABC transporter Vp2S01_A0449 PF00326 Prolyl oligopeptidase family Vp2S01_A0449 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vp2S01_A0451 PF13533 Biotin-lipoyl like Vp2S01_A0452 PF00873 AcrB/AcrD/AcrF family Vp2S01_A0453 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vp2S01_A0455 PF13302 Acetyltransferase (GNAT) domain Vp2S01_A0457 PF13185 GAF domain Vp2S01_A0457 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0462 PF00873 AcrB/AcrD/AcrF family Vp2S01_A0466 PF00384 Molybdopterin oxidoreductase Vp2S01_A0466 PF12838 4Fe-4S dicluster domain Vp2S01_A0466 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Vp2S01_A0466 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_A0466 PF01568 Molydopterin dinucleotide binding domain Vp2S01_A0471 PF00005 ABC transporter Vp2S01_A0474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0474 PF00672 HAMP domain Vp2S01_A0476 PF10282 Lactonase, 7-bladed beta-propeller Vp2S01_A0477 PF02567 Phenazine biosynthesis-like protein Vp2S01_A0478 PF01161 Phosphatidylethanolamine-binding protein Vp2S01_A0480 PF01758 Sodium Bile acid symporter family Vp2S01_A0483 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_A0484 PF02378 Phosphotransferase system, EIIC Vp2S01_A0484 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vp2S01_A0485 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_A0485 PF00107 Zinc-binding dehydrogenase Vp2S01_A0492 PF03222 Tryptophan/tyrosine permease family Vp2S01_A0494 PF00672 HAMP domain Vp2S01_A0494 PF02743 Cache domain Vp2S01_A0494 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0499 PF01476 LysM domain Vp2S01_A0499 PF08525 Opacity-associated protein A N-terminal motif Vp2S01_A0499 PF01551 Peptidase family M23 Vp2S01_A0500 PF08447 PAS fold Vp2S01_A0500 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0500 PF00563 EAL domain Vp2S01_A0500 PF08448 PAS fold Vp2S01_A0501 PF03466 LysR substrate binding domain Vp2S01_A0501 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0502 PF07690 Major Facilitator Superfamily Vp2S01_A0505 PF00462 Glutaredoxin Vp2S01_A0506 PF00892 EamA-like transporter family Vp2S01_A0507 PF00267 Gram-negative porin Vp2S01_A0509 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vp2S01_A0512 PF12833 Helix-turn-helix domain Vp2S01_A0513 PF01810 LysE type translocator Vp2S01_A0515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vp2S01_A0515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vp2S01_A0515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vp2S01_A0515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vp2S01_A0516 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vp2S01_A0516 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Vp2S01_A0517 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vp2S01_A0518 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Vp2S01_A0519 PF00510 Cytochrome c oxidase subunit III Vp2S01_A0523 PF02628 Cytochrome oxidase assembly protein Vp2S01_A0524 PF01040 UbiA prenyltransferase family Vp2S01_A0525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vp2S01_A0525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vp2S01_A0531 PF00313 'Cold-shock' DNA-binding domain Vp2S01_A0532 PF03889 Alternative ribosome-rescue factor A Vp2S01_A0533 PF08447 PAS fold Vp2S01_A0533 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0533 PF13426 PAS domain Vp2S01_A0534 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0537 PF12704 MacB-like periplasmic core domain Vp2S01_A0537 PF02687 FtsX-like permease family Vp2S01_A0538 PF00005 ABC transporter Vp2S01_A0538 PF12704 MacB-like periplasmic core domain Vp2S01_A0538 PF02687 FtsX-like permease family Vp2S01_A0541 PF17200 Single Cache domain 2 Vp2S01_A0541 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0541 PF00672 HAMP domain Vp2S01_A0542 PF00210 Ferritin-like domain Vp2S01_A0544 PF07995 Glucose / Sorbosone dehydrogenase Vp2S01_A0545 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_A0548 PF00892 EamA-like transporter family Vp2S01_A0553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0553 PF03466 LysR substrate binding domain Vp2S01_A0555 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_A0555 PF00501 AMP-binding enzyme Vp2S01_A0556 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Vp2S01_A0557 PF01329 Pterin 4 alpha carbinolamine dehydratase Vp2S01_A0561 PF12843 Putative quorum-sensing-regulated virulence factor Vp2S01_A0562 PF00271 Helicase conserved C-terminal domain Vp2S01_A0562 PF00270 DEAD/DEAH box helicase Vp2S01_A0563 PF09905 DNA-binding protein VF530 Vp2S01_A0564 PF00291 Pyridoxal-phosphate dependent enzyme Vp2S01_A0566 PF01470 Pyroglutamyl peptidase Vp2S01_A0568 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vp2S01_A0568 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vp2S01_A0569 PF00271 Helicase conserved C-terminal domain Vp2S01_A0569 PF00270 DEAD/DEAH box helicase Vp2S01_A0573 PF00563 EAL domain Vp2S01_A0573 PF12792 CSS motif domain associated with EAL Vp2S01_A0574 PF00005 ABC transporter Vp2S01_A0575 PF00672 HAMP domain Vp2S01_A0575 PF12729 Four helix bundle sensory module for signal transduction Vp2S01_A0575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0577 PF03466 LysR substrate binding domain Vp2S01_A0578 PF00884 Sulfatase Vp2S01_A0579 PF13186 Iron-sulfur cluster-binding domain Vp2S01_A0579 PF04055 Radical SAM superfamily Vp2S01_A0580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0580 PF03466 LysR substrate binding domain Vp2S01_A0582 PF12849 PBP superfamily domain Vp2S01_A0584 PF12833 Helix-turn-helix domain Vp2S01_A0585 PF08206 Ribonuclease B OB domain Vp2S01_A0585 PF00773 RNB domain Vp2S01_A0585 PF00575 S1 RNA binding domain Vp2S01_A0586 PF00270 DEAD/DEAH box helicase Vp2S01_A0586 PF03880 DbpA RNA binding domain Vp2S01_A0586 PF00271 Helicase conserved C-terminal domain Vp2S01_A0587 PF13426 PAS domain Vp2S01_A0587 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0587 PF00563 EAL domain Vp2S01_A0588 PF00871 Acetokinase family Vp2S01_A0589 PF08447 PAS fold Vp2S01_A0589 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0589 PF13426 PAS domain Vp2S01_A0591 PF10063 Uncharacterized integral membrane protein (DUF2301) Vp2S01_A0592 PF00682 HMGL-like Vp2S01_A0593 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_A0594 PF01039 Carboxyl transferase domain Vp2S01_A0595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vp2S01_A0595 PF02770 Acyl-CoA dehydrogenase, middle domain Vp2S01_A0595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vp2S01_A0596 PF09278 MerR, DNA binding Vp2S01_A0596 PF00376 MerR family regulatory protein Vp2S01_A0597 PF00108 Thiolase, N-terminal domain Vp2S01_A0597 PF02803 Thiolase, C-terminal domain Vp2S01_A0598 PF00171 Aldehyde dehydrogenase family Vp2S01_A0600 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_A0601 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_A0602 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vp2S01_A0602 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vp2S01_A0604 PF06481 COX Aromatic Rich Motif Vp2S01_A0604 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vp2S01_A0605 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vp2S01_A0606 PF00510 Cytochrome c oxidase subunit III Vp2S01_A0608 PF01040 UbiA prenyltransferase family Vp2S01_A0609 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vp2S01_A0611 PF01565 FAD binding domain Vp2S01_A0611 PF08031 Berberine and berberine like Vp2S01_A0614 PF00171 Aldehyde dehydrogenase family Vp2S01_A0616 PF02028 BCCT, betaine/carnitine/choline family transporter Vp2S01_A0619 PF05643 Putative bacterial lipoprotein (DUF799) Vp2S01_A0623 PF00005 ABC transporter Vp2S01_A0624 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_A0625 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0626 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0628 PF03466 LysR substrate binding domain Vp2S01_A0628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0629 PF02798 Glutathione S-transferase, N-terminal domain Vp2S01_A0629 PF00043 Glutathione S-transferase, C-terminal domain Vp2S01_A0631 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vp2S01_A0631 PF00364 Biotin-requiring enzyme Vp2S01_A0631 PF02817 e3 binding domain Vp2S01_A0632 PF02779 Transketolase, pyrimidine binding domain Vp2S01_A0632 PF02780 Transketolase, C-terminal domain Vp2S01_A0633 PF00676 Dehydrogenase E1 component Vp2S01_A0636 PF00012 Hsp70 protein Vp2S01_A0642 PF01497 Periplasmic binding protein Vp2S01_A0643 PF01032 FecCD transport family Vp2S01_A0644 PF01032 FecCD transport family Vp2S01_A0645 PF00005 ABC transporter Vp2S01_A0646 PF13411 MerR HTH family regulatory protein Vp2S01_A0649 PF00593 TonB dependent receptor Vp2S01_A0649 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A0656 PF12805 FUSC-like inner membrane protein yccS Vp2S01_A0657 PF12462 DNA helicase IV / RNA helicase N terminal Vp2S01_A0657 PF00580 UvrD/REP helicase N-terminal domain Vp2S01_A0657 PF13361 UvrD-like helicase C-terminal domain Vp2S01_A0658 PF02142 MGS-like domain Vp2S01_A0659 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vp2S01_A0660 PF00672 HAMP domain Vp2S01_A0660 PF00072 Response regulator receiver domain Vp2S01_A0660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0660 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A0660 PF01627 Hpt domain Vp2S01_A0663 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A0663 PF00072 Response regulator receiver domain Vp2S01_A0664 PF00884 Sulfatase Vp2S01_A0665 PF00884 Sulfatase Vp2S01_A0667 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0667 PF03466 LysR substrate binding domain Vp2S01_A0668 PF00884 Sulfatase Vp2S01_A0669 PF13186 Iron-sulfur cluster-binding domain Vp2S01_A0669 PF04055 Radical SAM superfamily Vp2S01_A0670 PF07726 ATPase family associated with various cellular activities (AAA) Vp2S01_A0670 PF17863 AAA lid domain Vp2S01_A0676 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vp2S01_A0677 PF03466 LysR substrate binding domain Vp2S01_A0677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0678 PF00781 Diacylglycerol kinase catalytic domain Vp2S01_A0679 PF04076 Bacterial OB fold (BOF) protein Vp2S01_A0682 PF04055 Radical SAM superfamily Vp2S01_A0682 PF13186 Iron-sulfur cluster-binding domain Vp2S01_A0684 PF08774 VRR-NUC domain Vp2S01_A0684 PF18081 Fanconi anemia-associated nuclease SAP domain Vp2S01_A0687 PF01435 Peptidase family M48 Vp2S01_A0688 PF04011 LemA family Vp2S01_A0689 PF03606 C4-dicarboxylate anaerobic carrier Vp2S01_A0691 PF00814 Glycoprotease family Vp2S01_A0691 PF00583 Acetyltransferase (GNAT) family Vp2S01_A0693 PF00072 Response regulator receiver domain Vp2S01_A0693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0694 PF00155 Aminotransferase class I and II Vp2S01_A0695 PF01926 50S ribosome-binding GTPase Vp2S01_A0696 PF03466 LysR substrate binding domain Vp2S01_A0696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0697 PF00884 Sulfatase Vp2S01_A0698 PF13186 Iron-sulfur cluster-binding domain Vp2S01_A0698 PF04055 Radical SAM superfamily Vp2S01_A0706 PF04002 RadC-like JAB domain Vp2S01_A0708 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_A0709 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_A0710 PF00596 Class II Aldolase and Adducin N-terminal domain Vp2S01_A0711 PF05025 RbsD / FucU transport protein family Vp2S01_A0712 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vp2S01_A0712 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vp2S01_A0713 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vp2S01_A0713 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vp2S01_A0714 PF07882 L-fucose isomerase, second N-terminal domain Vp2S01_A0714 PF07881 L-fucose isomerase, first N-terminal domain Vp2S01_A0714 PF02952 L-fucose isomerase, C-terminal domain Vp2S01_A0715 PF07690 Major Facilitator Superfamily Vp2S01_A0716 PF08220 DeoR-like helix-turn-helix domain Vp2S01_A0716 PF00455 DeoR C terminal sensor domain Vp2S01_A0721 PF04717 Type VI secretion system, phage-baseplate injector Vp2S01_A0724 PF01527 Transposase Vp2S01_A0725 PF02371 Transposase IS116/IS110/IS902 family Vp2S01_A0725 PF01548 Transposase Vp2S01_A0726 PF13333 Integrase core domain Vp2S01_A0726 PF00665 Integrase core domain Vp2S01_A0726 PF13276 HTH-like domain Vp2S01_A0729 PF13276 HTH-like domain Vp2S01_A0729 PF00665 Integrase core domain Vp2S01_A0729 PF13333 Integrase core domain Vp2S01_A0730 PF01527 Transposase Vp2S01_A0738 PF00563 EAL domain Vp2S01_A0738 PF12792 CSS motif domain associated with EAL Vp2S01_A0741 PF13276 HTH-like domain Vp2S01_A0741 PF00665 Integrase core domain Vp2S01_A0741 PF13333 Integrase core domain Vp2S01_A0744 PF00665 Integrase core domain Vp2S01_A0744 PF13333 Integrase core domain Vp2S01_A0744 PF13276 HTH-like domain Vp2S01_A0745 PF02371 Transposase IS116/IS110/IS902 family Vp2S01_A0745 PF01548 Transposase Vp2S01_A0746 PF01527 Transposase Vp2S01_A0749 PF07434 CblD like pilus biogenesis initiator Vp2S01_A0750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0750 PF13426 PAS domain Vp2S01_A0750 PF08447 PAS fold Vp2S01_A0751 PF13737 Transposase DDE domain Vp2S01_A0753 PF00665 Integrase core domain Vp2S01_A0754 PF00665 Integrase core domain Vp2S01_A0756 PF01695 IstB-like ATP binding protein Vp2S01_A0759 PF00672 HAMP domain Vp2S01_A0759 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0759 PF17200 Single Cache domain 2 Vp2S01_A0762 PF12792 CSS motif domain associated with EAL Vp2S01_A0762 PF00563 EAL domain Vp2S01_A0763 PF18413 Neuraminidase-like domain Vp2S01_A0763 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain Vp2S01_A0764 PF12256 Insecticide toxin TcdB middle/N-terminal region Vp2S01_A0764 PF12255 Insecticide toxin TcdB middle/C-terminal region Vp2S01_A0764 PF03534 Salmonella virulence plasmid 65kDa B protein Vp2S01_A0765 PF18807 Tripartite Tc toxins repeat Vp2S01_A0765 PF14431 YwqJ-like deaminase Vp2S01_A0766 PF18807 Tripartite Tc toxins repeat Vp2S01_A0766 PF14431 YwqJ-like deaminase Vp2S01_A0768 PF13737 Transposase DDE domain Vp2S01_A0769 PF13737 Transposase DDE domain Vp2S01_A0781 PF13737 Transposase DDE domain Vp2S01_A0782 PF13737 Transposase DDE domain Vp2S01_A0783 PF13737 Transposase DDE domain Vp2S01_A0786 PF13737 Transposase DDE domain Vp2S01_A0787 PF13737 Transposase DDE domain Vp2S01_A0788 PF00665 Integrase core domain Vp2S01_A0790 PF01527 Transposase Vp2S01_A0793 PF17128 Domain of unknown function (DUF5107) Vp2S01_A0793 PF13181 Tetratricopeptide repeat Vp2S01_A0794 PF00083 Sugar (and other) transporter Vp2S01_A0796 PF00480 ROK family Vp2S01_A0797 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_A0797 PF00149 Calcineurin-like phosphoesterase Vp2S01_A0802 PF16124 RecQ zinc-binding Vp2S01_A0802 PF00270 DEAD/DEAH box helicase Vp2S01_A0802 PF00271 Helicase conserved C-terminal domain Vp2S01_A0802 PF09382 RQC domain Vp2S01_A0802 PF00570 HRDC domain Vp2S01_A0804 PF13286 Phosphohydrolase-associated domain Vp2S01_A0804 PF01966 HD domain Vp2S01_A0808 PF13356 Arm DNA-binding domain Vp2S01_A0808 PF00589 Phage integrase family Vp2S01_A0810 PF01752 Collagenase Vp2S01_A0810 PF08453 Peptidase family M9 N-terminal Vp2S01_A0810 PF04151 Bacterial pre-peptidase C-terminal domain Vp2S01_A0812 PF12833 Helix-turn-helix domain Vp2S01_A0813 PF03466 LysR substrate binding domain Vp2S01_A0813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0817 PF00263 Bacterial type II and III secretion system protein Vp2S01_A0817 PF04972 BON domain Vp2S01_A0817 PF13629 Pilus formation protein N terminal region Vp2S01_A0820 PF00437 Type II/IV secretion system protein Vp2S01_A0827 PF00691 OmpA family Vp2S01_A0827 PF05736 OprF membrane domain Vp2S01_A0829 PF03466 LysR substrate binding domain Vp2S01_A0829 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0830 PF03466 LysR substrate binding domain Vp2S01_A0830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0832 PF00072 Response regulator receiver domain Vp2S01_A0832 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A0832 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0832 PF09456 RcsC Alpha-Beta-Loop (ABL) Vp2S01_A0833 PF13188 PAS domain Vp2S01_A0833 PF00563 EAL domain Vp2S01_A0833 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0833 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A0834 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A0834 PF00072 Response regulator receiver domain Vp2S01_A0835 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0837 PF00072 Response regulator receiver domain Vp2S01_A0837 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A0841 PF00072 Response regulator receiver domain Vp2S01_A0841 PF01584 CheW-like domain Vp2S01_A0844 PF00892 EamA-like transporter family Vp2S01_A0846 PF01569 PAP2 superfamily Vp2S01_A0848 PF07504 Fungalysin/Thermolysin Propeptide Motif Vp2S01_A0848 PF03413 Peptidase propeptide and YPEB domain Vp2S01_A0848 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vp2S01_A0848 PF04151 Bacterial pre-peptidase C-terminal domain Vp2S01_A0848 PF01447 Thermolysin metallopeptidase, catalytic domain Vp2S01_A0849 PF00893 Small Multidrug Resistance protein Vp2S01_A0850 PF00892 EamA-like transporter family Vp2S01_A0854 PF00171 Aldehyde dehydrogenase family Vp2S01_A0856 PF00939 Sodium:sulfate symporter transmembrane region Vp2S01_A0858 PF17203 Single cache domain 3 Vp2S01_A0858 PF00989 PAS fold Vp2S01_A0858 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Vp2S01_A0858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0859 PF12431 Transcriptional regulator Vp2S01_A0859 PF00072 Response regulator receiver domain Vp2S01_A0861 PF13187 4Fe-4S dicluster domain Vp2S01_A0861 PF01645 Conserved region in glutamate synthase Vp2S01_A0863 PF00141 Peroxidase Vp2S01_A0866 PF01757 Acyltransferase family Vp2S01_A0869 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vp2S01_A0870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_A0874 PF03448 MgtE intracellular N domain Vp2S01_A0874 PF01769 Divalent cation transporter Vp2S01_A0874 PF00571 CBS domain Vp2S01_A0878 PF01327 Polypeptide deformylase Vp2S01_A0879 PF00376 MerR family regulatory protein Vp2S01_A0879 PF09278 MerR, DNA binding Vp2S01_A0882 PF02253 Phospholipase A1 Vp2S01_A0883 PF02253 Phospholipase A1 Vp2S01_A0887 PF00664 ABC transporter transmembrane region Vp2S01_A0887 PF00005 ABC transporter Vp2S01_A0888 PF11490 DNA polymerase III polC-type N-terminus II Vp2S01_A0888 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vp2S01_A0888 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vp2S01_A0888 PF14579 Helix-hairpin-helix motif Vp2S01_A0888 PF00929 Exonuclease Vp2S01_A0888 PF02811 PHP domain Vp2S01_A0890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0890 PF03466 LysR substrate binding domain Vp2S01_A0891 PF17848 Acetyl-coA carboxylase zinc finger domain Vp2S01_A0891 PF01039 Carboxyl transferase domain Vp2S01_A0892 PF01212 Beta-eliminating lyase Vp2S01_A0896 PF02347 Glycine cleavage system P-protein Vp2S01_A0897 PF01597 Glycine cleavage H-protein Vp2S01_A0898 PF00464 Serine hydroxymethyltransferase Vp2S01_A0900 PF01571 Aminomethyltransferase folate-binding domain Vp2S01_A0900 PF08669 Glycine cleavage T-protein C-terminal barrel domain Vp2S01_A0904 PF00873 AcrB/AcrD/AcrF family Vp2S01_A0906 PF02378 Phosphotransferase system, EIIC Vp2S01_A0906 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vp2S01_A0907 PF00294 pfkB family carbohydrate kinase Vp2S01_A0908 PF00381 PTS HPr component phosphorylation site Vp2S01_A0908 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_A0909 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_A0909 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vp2S01_A0913 PF00989 PAS fold Vp2S01_A0913 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0913 PF00563 EAL domain Vp2S01_A0913 PF01590 GAF domain Vp2S01_A0914 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0915 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_A0916 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A0917 PF00005 ABC transporter Vp2S01_A0918 PF02887 Pyruvate kinase, alpha/beta domain Vp2S01_A0918 PF00224 Pyruvate kinase, barrel domain Vp2S01_A0919 PF07690 Major Facilitator Superfamily Vp2S01_A0921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A0921 PF00672 HAMP domain Vp2S01_A0921 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A0922 PF00072 Response regulator receiver domain Vp2S01_A0922 PF02954 Bacterial regulatory protein, Fis family Vp2S01_A0922 PF14532 Sigma-54 interaction domain Vp2S01_A0924 PF00465 Iron-containing alcohol dehydrogenase Vp2S01_A0925 PF06719 AraC-type transcriptional regulator N-terminus Vp2S01_A0925 PF12833 Helix-turn-helix domain Vp2S01_A0926 PF00704 Glycosyl hydrolases family 18 Vp2S01_A0926 PF06483 Chitinase C Vp2S01_A0927 PF00483 Nucleotidyl transferase Vp2S01_A0928 PF01268 Formate--tetrahydrofolate ligase Vp2S01_A0929 PF00294 pfkB family carbohydrate kinase Vp2S01_A0932 PF11849 Domain of unknown function (DUF3369) Vp2S01_A0933 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_A0935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A0937 PF04336 Acyl carrier protein phosphodiesterase Vp2S01_A0938 PF00271 Helicase conserved C-terminal domain Vp2S01_A0938 PF00270 DEAD/DEAH box helicase Vp2S01_A0939 PF00563 EAL domain Vp2S01_A0939 PF12792 CSS motif domain associated with EAL Vp2S01_A0942 PF01292 Prokaryotic cytochrome b561 Vp2S01_A0943 PF04264 YceI-like domain Vp2S01_A0944 PF01226 Formate/nitrite transporter Vp2S01_A0945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0945 PF03466 LysR substrate binding domain Vp2S01_A0947 PF06496 Protein of unknown function (DUF1097) Vp2S01_A0948 PF11398 Protein of unknown function (DUF2813) Vp2S01_A0949 PF00149 Calcineurin-like phosphoesterase Vp2S01_A0949 PF02872 5'-nucleotidase, C-terminal domain Vp2S01_A0950 PF03741 Integral membrane protein TerC family Vp2S01_A0953 PF12262 Bacterial virulence factor lipase N-terminal Vp2S01_A0954 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vp2S01_A0958 PF03061 Thioesterase superfamily Vp2S01_A0960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_A0960 PF12793 Sugar transport-related sRNA regulator N-term Vp2S01_A0966 PF00684 DnaJ central domain Vp2S01_A0966 PF01556 DnaJ C terminal domain Vp2S01_A0966 PF00226 DnaJ domain Vp2S01_A0968 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0968 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A0968 PF13188 PAS domain Vp2S01_A0968 PF00563 EAL domain Vp2S01_A0969 PF07055 Enoyl reductase FAD binding domain Vp2S01_A0969 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vp2S01_A0969 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vp2S01_A0970 PF13472 GDSL-like Lipase/Acylhydrolase family Vp2S01_A0971 PF00005 ABC transporter Vp2S01_A0974 PF02626 Carboxyltransferase domain, subdomain A and B Vp2S01_A0975 PF02682 Carboxyltransferase domain, subdomain C and D Vp2S01_A0976 PF03746 LamB/YcsF family Vp2S01_A0977 PF13426 PAS domain Vp2S01_A0977 PF08448 PAS fold Vp2S01_A0977 PF08447 PAS fold Vp2S01_A0977 PF05231 MASE1 Vp2S01_A0977 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A0977 PF00563 EAL domain Vp2S01_A0978 PF16363 GDP-mannose 4,6 dehydratase Vp2S01_A0980 PF00593 TonB dependent receptor Vp2S01_A0980 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A0981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0981 PF03466 LysR substrate binding domain Vp2S01_A0982 PF00583 Acetyltransferase (GNAT) family Vp2S01_A0982 PF13607 Succinyl-CoA ligase like flavodoxin domain Vp2S01_A0982 PF13380 CoA binding domain Vp2S01_A0984 PF07478 D-ala D-ala ligase C-terminus Vp2S01_A0984 PF01820 D-ala D-ala ligase N-terminus Vp2S01_A0986 PF01253 Translation initiation factor SUI1 Vp2S01_A0989 PF05840 Bacteriophage replication gene A protein (GPA) Vp2S01_A0996 PF00263 Bacterial type II and III secretion system protein Vp2S01_A0996 PF03958 Bacterial type II/III secretion system short domain Vp2S01_A0997 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A0997 PF03466 LysR substrate binding domain Vp2S01_A0999 PF00582 Universal stress protein family Vp2S01_A1000 PF03701 Uncharacterised protein family (UPF0181) Vp2S01_A1003 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1003 PF00072 Response regulator receiver domain Vp2S01_A1005 PF02233 NAD(P) transhydrogenase beta subunit Vp2S01_A1006 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vp2S01_A1006 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Vp2S01_A1006 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vp2S01_A1009 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1009 PF00072 Response regulator receiver domain Vp2S01_A1011 PF00563 EAL domain Vp2S01_A1011 PF01590 GAF domain Vp2S01_A1011 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1011 PF00360 Phytochrome region Vp2S01_A1013 PF00005 ABC transporter Vp2S01_A1013 PF03459 TOBE domain Vp2S01_A1014 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1016 PF07685 CobB/CobQ-like glutamine amidotransferase domain Vp2S01_A1017 PF04076 Bacterial OB fold (BOF) protein Vp2S01_A1020 PF18030 RimK PreATP-grasp domain Vp2S01_A1020 PF08443 RimK-like ATP-grasp domain Vp2S01_A1021 PF00155 Aminotransferase class I and II Vp2S01_A1022 PF12833 Helix-turn-helix domain Vp2S01_A1023 PF01554 MatE Vp2S01_A1025 PF03477 ATP cone domain Vp2S01_A1025 PF13597 Anaerobic ribonucleoside-triphosphate reductase Vp2S01_A1028 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_A1029 PF00873 AcrB/AcrD/AcrF family Vp2S01_A1031 PF04143 Sulphur transport Vp2S01_A1034 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vp2S01_A1034 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_A1035 PF00384 Molybdopterin oxidoreductase Vp2S01_A1036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1036 PF03466 LysR substrate binding domain Vp2S01_A1037 PF02634 FdhD/NarQ family Vp2S01_A1038 PF07690 Major Facilitator Superfamily Vp2S01_A1039 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A1039 PF00072 Response regulator receiver domain Vp2S01_A1040 PF05231 MASE1 Vp2S01_A1040 PF07730 Histidine kinase Vp2S01_A1040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1041 PF07690 Major Facilitator Superfamily Vp2S01_A1042 PF01238 Phosphomannose isomerase type I Vp2S01_A1046 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vp2S01_A1046 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vp2S01_A1047 PF00085 Thioredoxin Vp2S01_A1048 PF07690 Major Facilitator Superfamily Vp2S01_A1051 PF01554 MatE Vp2S01_A1052 PF11756 Nitrous oxide-stimulated promoter Vp2S01_A1055 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A1055 PF00593 TonB dependent receptor Vp2S01_A1057 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vp2S01_A1060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vp2S01_A1060 PF14824 Sirohaem biosynthesis protein central Vp2S01_A1060 PF10414 Sirohaem synthase dimerisation region Vp2S01_A1061 PF01226 Formate/nitrite transporter Vp2S01_A1062 PF13806 Rieske-like [2Fe-2S] domain Vp2S01_A1063 PF04324 BFD-like [2Fe-2S] binding domain Vp2S01_A1063 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vp2S01_A1063 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vp2S01_A1063 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vp2S01_A1063 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_A1064 PF01272 Transcription elongation factor, GreA/GreB, C-term Vp2S01_A1064 PF14760 Rnk N-terminus Vp2S01_A1069 PF13462 Thioredoxin Vp2S01_A1069 PF06965 Na+/H+ antiporter 1 Vp2S01_A1073 PF00128 Alpha amylase, catalytic domain Vp2S01_A1073 PF09154 Domain of unknown function (DUF1939) Vp2S01_A1074 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1074 PF00672 HAMP domain Vp2S01_A1075 PF01168 Alanine racemase, N-terminal domain Vp2S01_A1075 PF00842 Alanine racemase, C-terminal domain Vp2S01_A1079 PF01565 FAD binding domain Vp2S01_A1079 PF09330 D-lactate dehydrogenase, membrane binding Vp2S01_A1080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1080 PF03466 LysR substrate binding domain Vp2S01_A1086 PF00005 ABC transporter Vp2S01_A1097 PF05762 VWA domain containing CoxE-like protein Vp2S01_A1098 PF07728 AAA domain (dynein-related subfamily) Vp2S01_A1098 PF12592 Protein of unknown function (DUF3763) Vp2S01_A1098 PF17868 AAA lid domain Vp2S01_A1100 PF01212 Beta-eliminating lyase Vp2S01_A1101 PF00034 Cytochrome c Vp2S01_A1102 PF03606 C4-dicarboxylate anaerobic carrier Vp2S01_A1104 PF07690 Major Facilitator Superfamily Vp2S01_A1106 PF08212 Lipocalin-like domain Vp2S01_A1110 PF13476 AAA domain Vp2S01_A1111 PF00149 Calcineurin-like phosphoesterase Vp2S01_A1111 PF12320 Type 5 capsule protein repressor C-terminal domain Vp2S01_A1113 PF04717 Type VI secretion system, phage-baseplate injector Vp2S01_A1113 PF16671 Actin cross-linking domain Vp2S01_A1115 PF00004 ATPase family associated with various cellular activities (AAA) Vp2S01_A1115 PF17871 AAA lid domain Vp2S01_A1115 PF07724 AAA domain (Cdc48 subfamily) Vp2S01_A1115 PF10431 C-terminal, D2-small domain, of ClpB protein Vp2S01_A1127 PF00691 OmpA family Vp2S01_A1127 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vp2S01_A1131 PF03793 PASTA domain Vp2S01_A1131 PF00069 Protein kinase domain Vp2S01_A1136 PF00072 Response regulator receiver domain Vp2S01_A1136 PF00211 Adenylate and Guanylate cyclase catalytic domain Vp2S01_A1139 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_A1139 PF08361 MAATS-type transcriptional repressor, C-terminal region Vp2S01_A1142 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vp2S01_A1142 PF13806 Rieske-like [2Fe-2S] domain Vp2S01_A1142 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_A1142 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vp2S01_A1142 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vp2S01_A1142 PF04324 BFD-like [2Fe-2S] binding domain Vp2S01_A1143 PF00005 ABC transporter Vp2S01_A1144 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1147 PF08376 Nitrate and nitrite sensing Vp2S01_A1147 PF03861 ANTAR domain Vp2S01_A1148 PF01738 Dienelactone hydrolase family Vp2S01_A1149 PF00591 Glycosyl transferase family, a/b domain Vp2S01_A1149 PF02885 Glycosyl transferase family, helical bundle domain Vp2S01_A1150 PF14824 Sirohaem biosynthesis protein central Vp2S01_A1150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vp2S01_A1150 PF10414 Sirohaem synthase dimerisation region Vp2S01_A1151 PF01568 Molydopterin dinucleotide binding domain Vp2S01_A1151 PF00384 Molybdopterin oxidoreductase Vp2S01_A1151 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_A1154 PF03222 Tryptophan/tyrosine permease family Vp2S01_A1155 PF00072 Response regulator receiver domain Vp2S01_A1155 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1157 PF01483 Proprotein convertase P-domain Vp2S01_A1157 PF00082 Subtilase family Vp2S01_A1159 PF00245 Alkaline phosphatase Vp2S01_A1162 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1162 PF00072 Response regulator receiver domain Vp2S01_A1166 PF01048 Phosphorylase superfamily Vp2S01_A1167 PF04973 Nicotinamide mononucleotide transporter Vp2S01_A1169 PF00356 Bacterial regulatory proteins, lacI family Vp2S01_A1170 PF00294 pfkB family carbohydrate kinase Vp2S01_A1171 PF13407 Periplasmic binding protein domain Vp2S01_A1172 PF02653 Branched-chain amino acid transport system / permease component Vp2S01_A1173 PF00005 ABC transporter Vp2S01_A1174 PF05025 RbsD / FucU transport protein family Vp2S01_A1175 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1175 PF00563 EAL domain Vp2S01_A1176 PF01048 Phosphorylase superfamily Vp2S01_A1186 PF04116 Fatty acid hydroxylase superfamily Vp2S01_A1189 PF09308 LuxQ, periplasmic Vp2S01_A1189 PF00072 Response regulator receiver domain Vp2S01_A1189 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1190 PF00034 Cytochrome c Vp2S01_A1190 PF03150 Di-haem cytochrome c peroxidase Vp2S01_A1191 PF13188 PAS domain Vp2S01_A1191 PF00563 EAL domain Vp2S01_A1191 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A1191 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1193 PF01145 SPFH domain / Band 7 family Vp2S01_A1193 PF16200 C-terminal region of band_7 Vp2S01_A1195 PF00881 Nitroreductase family Vp2S01_A1196 PF00005 ABC transporter Vp2S01_A1196 PF00571 CBS domain Vp2S01_A1197 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1198 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vp2S01_A1199 PF05199 GMC oxidoreductase Vp2S01_A1199 PF00732 GMC oxidoreductase Vp2S01_A1200 PF00171 Aldehyde dehydrogenase family Vp2S01_A1201 PF13977 BetI-type transcriptional repressor, C-terminal Vp2S01_A1201 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_A1202 PF17151 Periplasmic sensor domain Vp2S01_A1202 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1204 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vp2S01_A1204 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vp2S01_A1206 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_A1207 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vp2S01_A1207 PF02770 Acyl-CoA dehydrogenase, middle domain Vp2S01_A1207 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vp2S01_A1208 PF00171 Aldehyde dehydrogenase family Vp2S01_A1209 PF00108 Thiolase, N-terminal domain Vp2S01_A1209 PF02803 Thiolase, C-terminal domain Vp2S01_A1210 PF00376 MerR family regulatory protein Vp2S01_A1210 PF09278 MerR, DNA binding Vp2S01_A1211 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vp2S01_A1211 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vp2S01_A1211 PF02770 Acyl-CoA dehydrogenase, middle domain Vp2S01_A1212 PF01039 Carboxyl transferase domain Vp2S01_A1213 PF00378 Enoyl-CoA hydratase/isomerase Vp2S01_A1214 PF00289 Biotin carboxylase, N-terminal domain Vp2S01_A1214 PF00364 Biotin-requiring enzyme Vp2S01_A1214 PF02785 Biotin carboxylase C-terminal domain Vp2S01_A1214 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vp2S01_A1215 PF00682 HMGL-like Vp2S01_A1216 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1216 PF01627 Hpt domain Vp2S01_A1216 PF00672 HAMP domain Vp2S01_A1216 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vp2S01_A1216 PF00072 Response regulator receiver domain Vp2S01_A1219 PF12795 Mechanosensitive ion channel porin domain Vp2S01_A1219 PF00924 Mechanosensitive ion channel Vp2S01_A1219 PF12794 Mechanosensitive ion channel inner membrane domain 1 Vp2S01_A1220 PF14602 Hexapeptide repeat of succinyl-transferase Vp2S01_A1220 PF12464 Maltose acetyltransferase Vp2S01_A1221 PF00155 Aminotransferase class I and II Vp2S01_A1221 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A1222 PF01654 Cytochrome bd terminal oxidase subunit I Vp2S01_A1223 PF02322 Cytochrome bd terminal oxidase subunit II Vp2S01_A1225 PF02567 Phenazine biosynthesis-like protein Vp2S01_A1226 PF02627 Carboxymuconolactone decarboxylase family Vp2S01_A1229 PF00034 Cytochrome c Vp2S01_A1232 PF05724 Thiopurine S-methyltransferase (TPMT) Vp2S01_A1233 PF14535 AMP-binding enzyme C-terminal domain Vp2S01_A1233 PF00501 AMP-binding enzyme Vp2S01_A1234 PF00005 ABC transporter Vp2S01_A1239 PF00005 ABC transporter Vp2S01_A1239 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vp2S01_A1242 PF01012 Electron transfer flavoprotein domain Vp2S01_A1243 PF01012 Electron transfer flavoprotein domain Vp2S01_A1243 PF00766 Electron transfer flavoprotein FAD-binding domain Vp2S01_A1244 PF13193 AMP-binding enzyme C-terminal domain Vp2S01_A1244 PF00501 AMP-binding enzyme Vp2S01_A1245 PF00478 IMP dehydrogenase / GMP reductase domain Vp2S01_A1246 PF03853 YjeF-related protein N-terminus Vp2S01_A1246 PF01256 Carbohydrate kinase Vp2S01_A1248 PF00072 Response regulator receiver domain Vp2S01_A1249 PF00248 Aldo/keto reductase family Vp2S01_A1252 PF00654 Voltage gated chloride channel Vp2S01_A1255 PF01566 Natural resistance-associated macrophage protein Vp2S01_A1256 PF01227 GTP cyclohydrolase I Vp2S01_A1257 PF03453 MoeA N-terminal region (domain I and II) Vp2S01_A1257 PF00994 Probable molybdopterin binding domain Vp2S01_A1257 PF03454 MoeA C-terminal region (domain IV) Vp2S01_A1258 PF00899 ThiF family Vp2S01_A1262 PF00581 Rhodanese-like domain Vp2S01_A1263 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1263 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A1263 PF00563 EAL domain Vp2S01_A1264 PF00704 Glycosyl hydrolases family 18 Vp2S01_A1264 PF08329 Chitinase A, N-terminal domain Vp2S01_A1268 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vp2S01_A1269 PF02779 Transketolase, pyrimidine binding domain Vp2S01_A1269 PF02780 Transketolase, C-terminal domain Vp2S01_A1269 PF00456 Transketolase, thiamine diphosphate binding domain Vp2S01_A1270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1270 PF08447 PAS fold Vp2S01_A1271 PF07690 Major Facilitator Superfamily Vp2S01_A1272 PF00793 DAHP synthetase I family Vp2S01_A1273 PF01389 OmpA-like transmembrane domain Vp2S01_A1273 PF00691 OmpA family Vp2S01_A1274 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_A1275 PF00472 RF-1 domain Vp2S01_A1276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1276 PF00672 HAMP domain Vp2S01_A1276 PF12729 Four helix bundle sensory module for signal transduction Vp2S01_A1277 PF00873 AcrB/AcrD/AcrF family Vp2S01_A1278 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_A1279 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vp2S01_A1280 PF01546 Peptidase family M20/M25/M40 Vp2S01_A1280 PF07687 Peptidase dimerisation domain Vp2S01_A1283 PF00072 Response regulator receiver domain Vp2S01_A1283 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A1284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1284 PF07730 Histidine kinase Vp2S01_A1284 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Vp2S01_A1284 PF00672 HAMP domain Vp2S01_A1285 PF12838 4Fe-4S dicluster domain Vp2S01_A1285 PF13187 4Fe-4S dicluster domain Vp2S01_A1287 PF00384 Molybdopterin oxidoreductase Vp2S01_A1287 PF01568 Molydopterin dinucleotide binding domain Vp2S01_A1287 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_A1288 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Vp2S01_A1289 PF03264 NapC/NirT cytochrome c family, N-terminal region Vp2S01_A1291 PF00561 alpha/beta hydrolase fold Vp2S01_A1291 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Vp2S01_A1293 PF00108 Thiolase, N-terminal domain Vp2S01_A1293 PF02803 Thiolase, C-terminal domain Vp2S01_A1294 PF00106 short chain dehydrogenase Vp2S01_A1297 PF02355 Protein export membrane protein Vp2S01_A1297 PF07549 SecD/SecF GG Motif Vp2S01_A1298 PF13721 SecD export protein N-terminal TM region Vp2S01_A1298 PF02355 Protein export membrane protein Vp2S01_A1298 PF07549 SecD/SecF GG Motif Vp2S01_A1303 PF01037 Lrp/AsnC ligand binding domain Vp2S01_A1307 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_A1307 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_A1309 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1309 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1309 PF09308 LuxQ, periplasmic Vp2S01_A1309 PF00072 Response regulator receiver domain Vp2S01_A1310 PF13407 Periplasmic binding protein domain Vp2S01_A1311 PF01541 GIY-YIG catalytic domain Vp2S01_A1312 PF04337 Protein of unknown function, DUF480 Vp2S01_A1315 PF04363 Protein of unknown function (DUF496) Vp2S01_A1316 PF01554 MatE Vp2S01_A1317 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vp2S01_A1318 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1318 PF00072 Response regulator receiver domain Vp2S01_A1318 PF01627 Hpt domain Vp2S01_A1318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1318 PF00672 HAMP domain Vp2S01_A1318 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vp2S01_A1319 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_A1319 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vp2S01_A1322 PF03466 LysR substrate binding domain Vp2S01_A1322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1323 PF13404 AsnC-type helix-turn-helix domain Vp2S01_A1323 PF01037 Lrp/AsnC ligand binding domain Vp2S01_A1324 PF13520 Amino acid permease Vp2S01_A1325 PF00155 Aminotransferase class I and II Vp2S01_A1325 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A1327 PF03109 ABC1 family Vp2S01_A1328 PF03448 MgtE intracellular N domain Vp2S01_A1328 PF01769 Divalent cation transporter Vp2S01_A1328 PF00571 CBS domain Vp2S01_A1329 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Vp2S01_A1330 PF07969 Amidohydrolase family Vp2S01_A1332 PF01966 HD domain Vp2S01_A1334 PF07690 Major Facilitator Superfamily Vp2S01_A1336 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vp2S01_A1337 PF00255 Glutathione peroxidase Vp2S01_A1340 PF01323 DSBA-like thioredoxin domain Vp2S01_A1343 PF00106 short chain dehydrogenase Vp2S01_A1344 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1344 PF00072 Response regulator receiver domain Vp2S01_A1345 PF00672 HAMP domain Vp2S01_A1345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1345 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1347 PF01219 Prokaryotic diacylglycerol kinase Vp2S01_A1348 PF00884 Sulfatase Vp2S01_A1348 PF08019 Phosphoethanolamine transferase EptA/EptB Vp2S01_A1349 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vp2S01_A1351 PF07690 Major Facilitator Superfamily Vp2S01_A1355 PF01047 MarR family Vp2S01_A1357 PF01734 Patatin-like phospholipase Vp2S01_A1358 PF05726 Pirin C-terminal cupin domain Vp2S01_A1358 PF02678 Pirin Vp2S01_A1359 PF00313 'Cold-shock' DNA-binding domain Vp2S01_A1361 PF00962 Adenosine/AMP deaminase Vp2S01_A1362 PF00462 Glutaredoxin Vp2S01_A1362 PF08534 Redoxin Vp2S01_A1364 PF00768 D-alanyl-D-alanine carboxypeptidase Vp2S01_A1364 PF07943 Penicillin-binding protein 5, C-terminal domain Vp2S01_A1366 PF02798 Glutathione S-transferase, N-terminal domain Vp2S01_A1367 PF02909 Tetracyclin repressor-like, C-terminal domain Vp2S01_A1367 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_A1368 PF01872 RibD C-terminal domain Vp2S01_A1382 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1383 PF14785 Maltose transport system permease protein MalF P2 domain Vp2S01_A1383 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1384 PF01547 Bacterial extracellular solute-binding protein Vp2S01_A1385 PF08402 TOBE domain Vp2S01_A1385 PF00005 ABC transporter Vp2S01_A1386 PF02397 Bacterial sugar transferase Vp2S01_A1389 PF13807 G-rich domain on putative tyrosine kinase Vp2S01_A1389 PF13614 AAA domain Vp2S01_A1389 PF02706 Chain length determinant protein Vp2S01_A1391 PF00534 Glycosyl transferases group 1 Vp2S01_A1398 PF16925 Tetracyclin repressor-like, C-terminal domain Vp2S01_A1398 PF00440 Bacterial regulatory proteins, tetR family Vp2S01_A1399 PF00107 Zinc-binding dehydrogenase Vp2S01_A1399 PF16884 N-terminal domain of oxidoreductase Vp2S01_A1400 PF13417 Glutathione S-transferase, N-terminal domain Vp2S01_A1401 PF06628 Catalase-related immune-responsive Vp2S01_A1401 PF00199 Catalase Vp2S01_A1402 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vp2S01_A1402 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vp2S01_A1404 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vp2S01_A1406 PF12833 Helix-turn-helix domain Vp2S01_A1407 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vp2S01_A1407 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vp2S01_A1408 PF01238 Phosphomannose isomerase type I Vp2S01_A1410 PF13419 Haloacid dehalogenase-like hydrolase Vp2S01_A1411 PF00127 Copper binding proteins, plastocyanin/azurin family Vp2S01_A1412 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A1412 PF00563 EAL domain Vp2S01_A1412 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1413 PF02386 Cation transport protein Vp2S01_A1414 PF02254 TrkA-N domain Vp2S01_A1414 PF02080 TrkA-C domain Vp2S01_A1415 PF00072 Response regulator receiver domain Vp2S01_A1415 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1416 PF16736 Single Cache-like Vp2S01_A1416 PF00989 PAS fold Vp2S01_A1416 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1417 PF00005 ABC transporter Vp2S01_A1417 PF00664 ABC transporter transmembrane region Vp2S01_A1418 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A1418 PF00593 TonB dependent receptor Vp2S01_A1419 PF00005 ABC transporter Vp2S01_A1420 PF01497 Periplasmic binding protein Vp2S01_A1421 PF01032 FecCD transport family Vp2S01_A1423 PF00691 OmpA family Vp2S01_A1426 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_A1427 PF00664 ABC transporter transmembrane region Vp2S01_A1427 PF00005 ABC transporter Vp2S01_A1429 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A1430 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A1432 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1432 PF02743 Cache domain Vp2S01_A1432 PF00672 HAMP domain Vp2S01_A1434 PF07726 ATPase family associated with various cellular activities (AAA) Vp2S01_A1434 PF17863 AAA lid domain Vp2S01_A1435 PF01882 Protein of unknown function DUF58 Vp2S01_A1437 PF13519 von Willebrand factor type A domain Vp2S01_A1438 PF13519 von Willebrand factor type A domain Vp2S01_A1441 PF00005 ABC transporter Vp2S01_A1442 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1443 PF00528 Binding-protein-dependent transport system inner membrane component Vp2S01_A1444 PF12849 PBP superfamily domain Vp2S01_A1446 PF00672 HAMP domain Vp2S01_A1446 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1450 PF00593 TonB dependent receptor Vp2S01_A1450 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A1451 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vp2S01_A1451 PF00326 Prolyl oligopeptidase family Vp2S01_A1452 PF00271 Helicase conserved C-terminal domain Vp2S01_A1452 PF00270 DEAD/DEAH box helicase Vp2S01_A1454 PF01476 LysM domain Vp2S01_A1454 PF03734 L,D-transpeptidase catalytic domain Vp2S01_A1454 PF17969 L,D-transpeptidase C-terminal domain Vp2S01_A1455 PF00875 DNA photolyase Vp2S01_A1455 PF03441 FAD binding domain of DNA photolyase Vp2S01_A1456 PF13411 MerR HTH family regulatory protein Vp2S01_A1457 PF08349 Protein of unknown function (DUF1722) Vp2S01_A1458 PF01048 Phosphorylase superfamily Vp2S01_A1461 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1462 PF11742 Protein of unknown function (DUF3302) Vp2S01_A1463 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_A1463 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vp2S01_A1464 PF07155 ECF-type riboflavin transporter, S component Vp2S01_A1465 PF00005 ABC transporter Vp2S01_A1465 PF12558 ATP-binding cassette cobalt transporter Vp2S01_A1468 PF12801 4Fe-4S binding domain Vp2S01_A1468 PF13237 4Fe-4S dicluster domain Vp2S01_A1469 PF12838 4Fe-4S dicluster domain Vp2S01_A1469 PF12800 4Fe-4S binding domain Vp2S01_A1470 PF00583 Acetyltransferase (GNAT) family Vp2S01_A1473 PF07238 PilZ domain Vp2S01_A1473 PF12945 Flagellar protein YcgR Vp2S01_A1474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1474 PF00672 HAMP domain Vp2S01_A1475 PF13654 AAA domain Vp2S01_A1475 PF05362 Lon protease (S16) C-terminal proteolytic domain Vp2S01_A1478 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_A1478 PF00005 ABC transporter Vp2S01_A1479 PF00326 Prolyl oligopeptidase family Vp2S01_A1479 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vp2S01_A1480 PF03466 LysR substrate binding domain Vp2S01_A1480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1481 PF02652 L-lactate permease Vp2S01_A1482 PF01070 FMN-dependent dehydrogenase Vp2S01_A1484 PF00924 Mechanosensitive ion channel Vp2S01_A1485 PF00194 Eukaryotic-type carbonic anhydrase Vp2S01_A1491 PF08240 Alcohol dehydrogenase GroES-like domain Vp2S01_A1491 PF00107 Zinc-binding dehydrogenase Vp2S01_A1492 PF00155 Aminotransferase class I and II Vp2S01_A1493 PF00563 EAL domain Vp2S01_A1493 PF00990 Diguanylate cyclase, GGDEF domain Vp2S01_A1493 PF03707 Bacterial signalling protein N terminal repeat Vp2S01_A1494 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vp2S01_A1495 PF00266 Aminotransferase class-V Vp2S01_A1496 PF00080 Copper/zinc superoxide dismutase (SODC) Vp2S01_A1497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1497 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1497 PF08448 PAS fold Vp2S01_A1497 PF13426 PAS domain Vp2S01_A1497 PF00072 Response regulator receiver domain Vp2S01_A1498 PF00072 Response regulator receiver domain Vp2S01_A1498 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1503 PF03466 LysR substrate binding domain Vp2S01_A1504 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vp2S01_A1512 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1512 PF03466 LysR substrate binding domain Vp2S01_A1515 PF18269 T3SS EscN ATPase C-terminal domain Vp2S01_A1515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vp2S01_A1517 PF14841 FliG middle domain Vp2S01_A1517 PF01706 FliG C-terminal domain Vp2S01_A1517 PF14842 FliG N-terminal domain Vp2S01_A1518 PF08345 Flagellar M-ring protein C-terminal Vp2S01_A1518 PF01514 Secretory protein of YscJ/FliF family Vp2S01_A1519 PF02049 Flagellar hook-basal body complex protein FliE Vp2S01_A1520 PF00158 Sigma-54 interaction domain Vp2S01_A1520 PF00072 Response regulator receiver domain Vp2S01_A1520 PF02954 Bacterial regulatory protein, Fis family Vp2S01_A1523 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vp2S01_A1524 PF00813 FliP family Vp2S01_A1525 PF01313 Bacterial export proteins, family 3 Vp2S01_A1526 PF01311 Bacterial export proteins, family 1 Vp2S01_A1527 PF01312 FlhB HrpN YscU SpaS Family Vp2S01_A1528 PF00771 FHIPEP family Vp2S01_A1530 PF00669 Bacterial flagellin N-terminal helical region Vp2S01_A1530 PF00700 Bacterial flagellin C-terminal helical region Vp2S01_A1531 PF02465 Flagellar hook-associated protein 2 N-terminus Vp2S01_A1531 PF07195 Flagellar hook-associated protein 2 C-terminus Vp2S01_A1531 PF07196 Flagellin hook IN motif Vp2S01_A1532 PF02561 Flagellar protein FliS Vp2S01_A1535 PF03748 Flagellar basal body-associated protein FliL Vp2S01_A1536 PF04542 Sigma-70 region 2 Vp2S01_A1536 PF04545 Sigma-70, region 4 Vp2S01_A1537 PF01618 MotA/TolQ/ExbB proton channel family Vp2S01_A1538 PF00691 OmpA family Vp2S01_A1538 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vp2S01_A1540 PF08000 Bacterial PH domain Vp2S01_A1546 PF04055 Radical SAM superfamily Vp2S01_A1547 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vp2S01_A1549 PF00583 Acetyltransferase (GNAT) family Vp2S01_A1552 PF07690 Major Facilitator Superfamily Vp2S01_A1553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1553 PF03466 LysR substrate binding domain Vp2S01_A1554 PF00892 EamA-like transporter family Vp2S01_A1557 PF02321 Outer membrane efflux protein Vp2S01_A1559 PF13533 Biotin-lipoyl like Vp2S01_A1561 PF01594 AI-2E family transporter Vp2S01_A1562 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vp2S01_A1564 PF00175 Oxidoreductase NAD-binding domain Vp2S01_A1564 PF00970 Oxidoreductase FAD-binding domain Vp2S01_A1566 PF09905 DNA-binding protein VF530 Vp2S01_A1567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1567 PF03466 LysR substrate binding domain Vp2S01_A1569 PF00881 Nitroreductase family Vp2S01_A1570 PF12833 Helix-turn-helix domain Vp2S01_A1570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Vp2S01_A1571 PF00686 Starch binding domain Vp2S01_A1571 PF00128 Alpha amylase, catalytic domain Vp2S01_A1572 PF00768 D-alanyl-D-alanine carboxypeptidase Vp2S01_A1572 PF07943 Penicillin-binding protein 5, C-terminal domain Vp2S01_A1573 PF00561 alpha/beta hydrolase fold Vp2S01_A1576 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading Vp2S01_A1576 PF18416 N-acetylglucosamine binding protein domain 2 Vp2S01_A1577 PF01734 Patatin-like phospholipase Vp2S01_A1578 PF01914 MarC family integral membrane protein Vp2S01_A1579 PF00881 Nitroreductase family Vp2S01_A1580 PF02563 Polysaccharide biosynthesis/export protein Vp2S01_A1580 PF10531 SLBB domain Vp2S01_A1580 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Vp2S01_A1581 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vp2S01_A1582 PF13614 AAA domain Vp2S01_A1582 PF02706 Chain length determinant protein Vp2S01_A1582 PF13807 G-rich domain on putative tyrosine kinase Vp2S01_A1584 PF08803 Putative mono-oxygenase ydhR Vp2S01_A1585 PF03466 LysR substrate binding domain Vp2S01_A1585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1587 PF00375 Sodium:dicarboxylate symporter family Vp2S01_A1588 PF06803 Protein of unknown function (DUF1232) Vp2S01_A1589 PF01546 Peptidase family M20/M25/M40 Vp2S01_A1589 PF07687 Peptidase dimerisation domain Vp2S01_A1590 PF07670 Nucleoside recognition Vp2S01_A1591 PF07670 Nucleoside recognition Vp2S01_A1594 PF00128 Alpha amylase, catalytic domain Vp2S01_A1595 PF00912 Transglycosylase Vp2S01_A1596 PF02806 Alpha amylase, C-terminal all-beta domain Vp2S01_A1596 PF00128 Alpha amylase, catalytic domain Vp2S01_A1596 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vp2S01_A1597 PF02446 4-alpha-glucanotransferase Vp2S01_A1598 PF00343 Carbohydrate phosphorylase Vp2S01_A1601 PF17874 MalT-like TPR region Vp2S01_A1601 PF00196 Bacterial regulatory proteins, luxR family Vp2S01_A1604 PF02630 SCO1/SenC Vp2S01_A1606 PF00367 phosphotransferase system, EIIB Vp2S01_A1606 PF02378 Phosphotransferase system, EIIC Vp2S01_A1607 PF03193 RsgA GTPase Vp2S01_A1608 PF00375 Sodium:dicarboxylate symporter family Vp2S01_A1610 PF08543 Phosphomethylpyrimidine kinase Vp2S01_A1612 PF13520 Amino acid permease Vp2S01_A1613 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vp2S01_A1613 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vp2S01_A1613 PF01276 Orn/Lys/Arg decarboxylase, major domain Vp2S01_A1616 PF17967 Pullulanase N2 domain Vp2S01_A1616 PF18494 Pullulanase Ins domain Vp2S01_A1616 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vp2S01_A1616 PF03714 Bacterial pullanase-associated domain Vp2S01_A1616 PF11852 Domain of unknown function (DUF3372) Vp2S01_A1617 PF04231 Endonuclease I Vp2S01_A1618 PF16657 Maltogenic Amylase, C-terminal domain Vp2S01_A1618 PF02903 Alpha amylase, N-terminal ig-like domain Vp2S01_A1618 PF00128 Alpha amylase, catalytic domain Vp2S01_A1621 PF02264 LamB porin Vp2S01_A1622 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vp2S01_A1622 PF00128 Alpha amylase, catalytic domain Vp2S01_A1624 PF07690 Major Facilitator Superfamily Vp2S01_A1626 PF04225 Opacity-associated protein A LysM-like domain Vp2S01_A1626 PF01551 Peptidase family M23 Vp2S01_A1628 PF05193 Peptidase M16 inactive domain Vp2S01_A1628 PF00675 Insulinase (Peptidase family M16) Vp2S01_A1629 PF00672 HAMP domain Vp2S01_A1629 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1629 PF17200 Single Cache domain 2 Vp2S01_A1630 PF00005 ABC transporter Vp2S01_A1631 PF01032 FecCD transport family Vp2S01_A1632 PF01032 FecCD transport family Vp2S01_A1633 PF01497 Periplasmic binding protein Vp2S01_A1634 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A1634 PF00593 TonB dependent receptor Vp2S01_A1634 PF07660 Secretin and TonB N terminus short domain Vp2S01_A1635 PF00593 TonB dependent receptor Vp2S01_A1635 PF07715 TonB-dependent Receptor Plug Domain Vp2S01_A1636 PF02655 ATP-grasp domain Vp2S01_A1636 PF00206 Lyase Vp2S01_A1637 PF04183 IucA / IucC family Vp2S01_A1637 PF06276 Ferric iron reductase FhuF-like transporter Vp2S01_A1639 PF04183 IucA / IucC family Vp2S01_A1639 PF06276 Ferric iron reductase FhuF-like transporter Vp2S01_A1640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vp2S01_A1640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vp2S01_A1641 PF01547 Bacterial extracellular solute-binding protein Vp2S01_A1642 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1642 PF08521 Two-component sensor kinase N-terminal Vp2S01_A1643 PF00486 Transcriptional regulatory protein, C terminal Vp2S01_A1643 PF00072 Response regulator receiver domain Vp2S01_A1644 PF02378 Phosphotransferase system, EIIC Vp2S01_A1644 PF00367 phosphotransferase system, EIIB Vp2S01_A1647 PF02653 Branched-chain amino acid transport system / permease component Vp2S01_A1648 PF00005 ABC transporter Vp2S01_A1649 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vp2S01_A1650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vp2S01_A1650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vp2S01_A1651 PF00596 Class II Aldolase and Adducin N-terminal domain Vp2S01_A1652 PF11762 L-arabinose isomerase C-terminal domain Vp2S01_A1652 PF02610 L-arabinose isomerase Vp2S01_A1654 PF12833 Helix-turn-helix domain Vp2S01_A1654 PF02311 AraC-like ligand binding domain Vp2S01_A1657 PF02566 OsmC-like protein Vp2S01_A1658 PF01047 MarR family Vp2S01_A1659 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vp2S01_A1659 PF00578 AhpC/TSA family Vp2S01_A1660 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vp2S01_A1660 PF13192 Thioredoxin domain Vp2S01_A1663 PF03466 LysR substrate binding domain Vp2S01_A1663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1664 PF01965 DJ-1/PfpI family Vp2S01_A1664 PF12833 Helix-turn-helix domain Vp2S01_A1665 PF08281 Sigma-70, region 4 Vp2S01_A1665 PF04542 Sigma-70 region 2 Vp2S01_A1668 PF02743 Cache domain Vp2S01_A1668 PF00672 HAMP domain Vp2S01_A1668 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vp2S01_A1669 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1669 PF03466 LysR substrate binding domain Vp2S01_A1670 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vp2S01_A1670 PF02056 Family 4 glycosyl hydrolase Vp2S01_A1673 PF03473 MOSC domain Vp2S01_A1673 PF03475 3-alpha domain Vp2S01_A1674 PF00271 Helicase conserved C-terminal domain Vp2S01_A1674 PF00270 DEAD/DEAH box helicase Vp2S01_A1675 PF03786 D-mannonate dehydratase (UxuA) Vp2S01_A1676 PF07729 FCD domain Vp2S01_A1676 PF00392 Bacterial regulatory proteins, gntR family Vp2S01_A1677 PF03480 Bacterial extracellular solute-binding protein, family 7 Vp2S01_A1678 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vp2S01_A1679 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vp2S01_A1680 PF01232 Mannitol dehydrogenase Rossmann domain Vp2S01_A1680 PF08125 Mannitol dehydrogenase C-terminal domain Vp2S01_A1681 PF02614 Glucuronate isomerase Vp2S01_A1682 PF00294 pfkB family carbohydrate kinase Vp2S01_A1683 PF01081 KDPG and KHG aldolase Vp2S01_A1684 PF10688 Bacterial inner membrane protein Vp2S01_A1688 PF12833 Helix-turn-helix domain Vp2S01_A1688 PF06719 AraC-type transcriptional regulator N-terminus Vp2S01_A1690 PF00005 ABC transporter Vp2S01_A1690 PF00664 ABC transporter transmembrane region Vp2S01_A1692 PF01037 Lrp/AsnC ligand binding domain Vp2S01_A1699 PF00474 Sodium:solute symporter family Vp2S01_A1701 PF14850 DNA-binding domain of Proline dehydrogenase Vp2S01_A1701 PF01619 Proline dehydrogenase Vp2S01_A1701 PF00171 Aldehyde dehydrogenase family Vp2S01_A1701 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Vp2S01_A1702 PF12833 Helix-turn-helix domain Vp2S01_A1705 PF01243 Pyridoxamine 5'-phosphate oxidase Vp2S01_A1705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Vp2S01_A1706 PF02743 Cache domain Vp2S01_A1706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1706 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1707 PF00072 Response regulator receiver domain Vp2S01_A1707 PF02954 Bacterial regulatory protein, Fis family Vp2S01_A1707 PF00158 Sigma-54 interaction domain Vp2S01_A1708 PF00529 HlyD membrane-fusion protein of T1SS Vp2S01_A1711 PF00664 ABC transporter transmembrane region Vp2S01_A1711 PF03412 Peptidase C39 family Vp2S01_A1711 PF00005 ABC transporter Vp2S01_A1715 PF03358 NADPH-dependent FMN reductase Vp2S01_A1716 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vp2S01_A1717 PF00246 Zinc carboxypeptidase Vp2S01_A1718 PF01380 SIS domain Vp2S01_A1718 PF01418 Helix-turn-helix domain, rpiR family Vp2S01_A1719 PF01380 SIS domain Vp2S01_A1720 PF02378 Phosphotransferase system, EIIC Vp2S01_A1720 PF00367 phosphotransferase system, EIIB Vp2S01_A1721 PF00267 Gram-negative porin Vp2S01_A1722 PF03575 Peptidase family S51 Vp2S01_A1723 PF03466 LysR substrate binding domain Vp2S01_A1723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vp2S01_A1724 PF00132 Bacterial transferase hexapeptide (six repeats) Vp2S01_A1726 PF05127 Helicase Vp2S01_A1726 PF13718 GNAT acetyltransferase 2 Vp2S01_A1727 PF02195 ParB-like nuclease domain Vp2S01_A1727 PF08775 ParB family Vp2S01_A1728 PF13614 AAA domain Vp2S01_A1728 PF18607 ParA helix turn helix domain Vp2S01_A1732 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_A1732 PF00005 ABC transporter Vp2S01_A1733 PF00005 ABC transporter Vp2S01_A1733 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vp2S01_A1735 PF08719 Domain of unknown function (DUF1768) Vp2S01_A1735 PF00925 GTP cyclohydrolase II Vp2S01_A1737 PF00672 HAMP domain Vp2S01_A1737 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vp2S01_A1737 PF00512 His Kinase A (phospho-acceptor) domain Vp2S01_A1737 PF17149 Periplasmic sensor domain found in signal transduction proteins Vp2S01_A1737 PF01627 Hpt domain Vp2S01_A1737 PF00072 Response regulator receiver domain Vp2S01_A1739 PF01709 Transcriptional regulator Vp2S01_A1740 PF01098 Cell cycle protein Vp2S01_A1744 PF00005 ABC transporter Vp2S01_p10002 PF04754 Putative transposase, YhgA-like Vp2S01_p10003 PF13614 AAA domain Vp2S01_p10011 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Vp2S01_p10016 PF13737 Transposase DDE domain Vp2S01_p10023 PF13737 Transposase DDE domain Vp2S01_p10024 PF02384 N-6 DNA Methylase Vp2S01_p10024 PF07669 Eco57I restriction-modification methylase Vp2S01_p10034 PF13362 Toprim domain Vp2S01_p10034 PF18818 Metallopeptidase superfamily domain Vp2S01_p10034 PF08401 Domain of unknown function (DUF1738) Vp2S01_p10041 PF01131 DNA topoisomerase Vp2S01_p10041 PF01751 Toprim domain Vp2S01_p10055 PF01464 Transglycosylase SLT domain Vp2S01_p10056 PF10502 Signal peptidase, peptidase S26 Vp2S01_p10059 PF01848 Hok/gef family Vp2S01_p10067 PF00437 Type II/IV secretion system protein Vp2S01_p10072 PF03743 Bacterial conjugation TrbI-like protein Vp2S01_p10074 PF03524 Conjugal transfer protein Vp2S01_p10077 PF00437 Type II/IV secretion system protein Vp2S01_p10079 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vp2S01_p10080 PF05101 Type IV secretory pathway, VirB3-like protein Vp2S01_p10081 PF04956 TrbC/VIRB2 family Vp2S01_p20009 PF01343 Peptidase family S49