Vp2S01_0006 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0008 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_0008 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vp2S01_0010 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0010 SM00760 Bacterial dnaA protein helix-turn-helix domain Vp2S01_0011 SM00480 DNA polymerase III beta subunit Vp2S01_0013 SM00387 Histidine kinase-like ATPases Vp2S01_0013 SM00433 TopoisomeraseII Vp2S01_0019 SM00642 Alpha-amylase domain Vp2S01_0028 SM00829 Enoylreductase Vp2S01_0044 SM00876 Biotin and Thiamin Synthesis associated domain Vp2S01_0056 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_0058 SM00341 Helicase and RNase D C-terminal Vp2S01_0058 SM00487 DEAD-like helicases superfamily Vp2S01_0058 SM00490 helicase superfamily c-terminal domain Vp2S01_0058 SM00956 Vp2S01_0058 Vp2S01_0062 SM00487 DEAD-like helicases superfamily Vp2S01_0062 SM00490 helicase superfamily c-terminal domain Vp2S01_0064 SM00357 Cold shock protein domain Vp2S01_0064 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0064 SM00959 Rho termination factor, N-terminal domain Vp2S01_0073 SM00028 Tetratricopeptide repeats Vp2S01_0078 SM01219 Vp2S01_0078 Vp2S01_0085 SM00052 Putative diguanylate phosphodiesterase Vp2S01_0085 SM00897 FIST N domain Vp2S01_0085 SM01204 Vp2S01_0085 Vp2S01_0086 SM01144 Vp2S01_0086 Vp2S01_0092 SM00052 Putative diguanylate phosphodiesterase Vp2S01_0093 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vp2S01_0094 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0108 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0108 SM00962 SRP54-type protein, GTPase domain Vp2S01_0108 SM00963 SRP54-type protein, helical bundle domain Vp2S01_0109 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0112 SM00450 Rhodanese Homology Domain Vp2S01_0117 SM00563 Phosphate acyltransferases Vp2S01_0128 SM00360 RNA recognition motif Vp2S01_0136 SM00155 Phospholipase D. Active site motifs. Vp2S01_0144 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Vp2S01_0144 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Vp2S01_0145 SM00649 Ribosomal protein L11/L12 Vp2S01_0150 SM00663 RNA polymerase I subunit A N-terminus Vp2S01_0156 SM00986 Uracil DNA glycosylase superfamily Vp2S01_0156 SM00987 UreE urease accessory protein, C-terminal domain Vp2S01_0160 SM00411 bacterial (prokaryotic) histone like domain Vp2S01_0162 SM01209 Vp2S01_0162 Vp2S01_0162 SM01210 Vp2S01_0162 Vp2S01_0163 SM00798 AICARFT/IMPCHase bienzyme Vp2S01_0163 SM00851 MGS-like domain Vp2S01_0165 SM00422 helix_turn_helix, mercury resistance Vp2S01_0167 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_0179 SM00267 diguanylate cyclase Vp2S01_0180 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0185 SM00878 Biotin carboxylase C-terminal domain Vp2S01_0189 SM00479 Vp2S01_0189 Vp2S01_0192 SM00387 Histidine kinase-like ATPases Vp2S01_0192 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_0192 SM00448 cheY-homologous receiver domain Vp2S01_0198 SM01091 Transporter associated domain Vp2S01_0199 SM00421 helix_turn_helix, Lux Regulon Vp2S01_0199 SM00448 cheY-homologous receiver domain Vp2S01_0206 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_0206 SM00387 Histidine kinase-like ATPases Vp2S01_0206 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_0207 SM00448 cheY-homologous receiver domain Vp2S01_0207 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_0212 SM00883 Chaperonin 10 Kd subunit Vp2S01_0216 SM01005 Alanine racemase, C-terminal domain Vp2S01_0219 SM00841 Elongation factor P, C-terminal Vp2S01_0219 SM01185 Vp2S01_0219 Vp2S01_0231 SM00971 Serine acetyltransferase, N-terminal Vp2S01_0234 SM00450 Rhodanese Homology Domain Vp2S01_0238 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_0238 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_0243 SM00479 Vp2S01_0243 Vp2S01_0246 SM00257 Lysin motif Vp2S01_0246 SM00646 Vp2S01_0246 Vp2S01_0247 SM00853 MutL C terminal dimerisation domain Vp2S01_0247 SM01340 Vp2S01_0247 Vp2S01_0251 SM00244 prohibitin homologues Vp2S01_0252 SM00244 prohibitin homologues Vp2S01_0254 SM00788 Adenylosuccinate synthetase Vp2S01_0255 SM00671 Sel1-like repeats. Vp2S01_0258 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_0258 SM00357 Cold shock protein domain Vp2S01_0258 SM00955 Vp2S01_0258 Vp2S01_0259 SM00967 RNA 2'-O ribose methyltransferase substrate binding Vp2S01_0269 SM01150 Vp2S01_0269 Vp2S01_0270 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_0270 SM00419 helix_turn_helix, cAMP Regulatory protein Vp2S01_0275 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0282 SM00320 WD40 repeats Vp2S01_0290 SM00838 Elongation factor G C-terminus Vp2S01_0290 SM00889 Elongation factor G, domain IV Vp2S01_0293 SM00919 Malic enzyme, NAD binding domain Vp2S01_0293 SM01274 Vp2S01_0293 Vp2S01_0302 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0314 SM00965 Secretin and TonB N terminus short domain Vp2S01_0325 SM01005 Alanine racemase, C-terminal domain Vp2S01_0349 SM01018 B12 binding domain Vp2S01_0356 SM00421 helix_turn_helix, Lux Regulon Vp2S01_0358 SM00052 Putative diguanylate phosphodiesterase Vp2S01_0358 SM00267 diguanylate cyclase Vp2S01_0362 SM00965 Secretin and TonB N terminus short domain Vp2S01_0364 SM00028 Tetratricopeptide repeats Vp2S01_0365 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0380 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_0384 SM00670 Large family of predicted nucleotide-binding domains Vp2S01_0385 SM00487 DEAD-like helicases superfamily Vp2S01_0385 SM00490 helicase superfamily c-terminal domain Vp2S01_0392 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_0392 SM00924 MgtE intracellular N domain Vp2S01_0398 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0401 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_0403 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0410 SM00563 Phosphate acyltransferases Vp2S01_0418 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_0432 SM00495 Chitin-binding domain type 3 Vp2S01_0438 SM00354 helix_turn _helix lactose operon repressor Vp2S01_0439 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_0445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_0445 SM01049 Vp2S01_0445 Vp2S01_0448 SM00478 endonuclease III Vp2S01_0448 SM00525 Vp2S01_0448 Vp2S01_0452 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_0455 SM01152 Vp2S01_0455 Vp2S01_0461 SM00732 Likely ribonuclease with RNase H fold. Vp2S01_0466 SM00731 SprT homologues. Vp2S01_0470 SM00861 Transketolase, pyrimidine binding domain Vp2S01_0473 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0497 SM00838 Elongation factor G C-terminus Vp2S01_0499 SM00358 Double-stranded RNA binding motif Vp2S01_0499 SM00535 Ribonuclease III family Vp2S01_0504 SM00073 Histidine Phosphotransfer domain Vp2S01_0504 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_0504 SM00387 Histidine kinase-like ATPases Vp2S01_0504 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_0504 SM00448 cheY-homologous receiver domain Vp2S01_0506 SM00954 Region found in RelA / SpoT proteins Vp2S01_0509 SM01192 Vp2S01_0509 Vp2S01_0509 SM01193 Vp2S01_0509 Vp2S01_0516 SM00257 Lysin motif Vp2S01_0518 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Vp2S01_0518 SM00534 ATPase domain of DNA mismatch repair MUTS family Vp2S01_0520 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0522 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_0529 SM00829 Enoylreductase Vp2S01_0535 SM01091 Transporter associated domain Vp2S01_0537 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0537 SM00962 SRP54-type protein, GTPase domain Vp2S01_0537 SM00963 SRP54-type protein, helical bundle domain Vp2S01_0550 SM00644 Vp2S01_0550 Vp2S01_0551 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_0551 SM00895 Vp2S01_0551 Vp2S01_0557 SM00947 Carbonic anhydrase Vp2S01_0559 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0569 SM00487 DEAD-like helicases superfamily Vp2S01_0569 SM00490 helicase superfamily c-terminal domain Vp2S01_0569 SM00847 Helicase associated domain (HA2) Add an annotation Vp2S01_0574 SM00938 Nitrogen regulatory protein P-II Vp2S01_0578 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0580 SM01068 Putative carbohydrate binding domain Vp2S01_0584 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0585 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0589 SM00091 PAS domain Vp2S01_0589 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_0589 SM00387 Histidine kinase-like ATPases Vp2S01_0589 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_0589 SM00448 cheY-homologous receiver domain Vp2S01_0604 SM01103 Vp2S01_0604 Vp2S01_0606 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0611 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_0615 SM01387 Vp2S01_0615 Vp2S01_0616 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_0616 SM00322 K homology RNA-binding domain Vp2S01_0617 SM00028 Tetratricopeptide repeats Vp2S01_0618 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_0622 SM00052 Putative diguanylate phosphodiesterase Vp2S01_0622 SM00091 PAS domain Vp2S01_0622 SM00267 diguanylate cyclase Vp2S01_0632 SM01133 Vp2S01_0632 Vp2S01_0633 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Vp2S01_0639 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0640 SM00838 Elongation factor G C-terminus Vp2S01_0640 SM00889 Elongation factor G, domain IV Vp2S01_0644 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_0647 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0648 SM00858 Vp2S01_0648 Vp2S01_0658 SM00028 Tetratricopeptide repeats Vp2S01_0664 SM01038 Beta galactosidase small chain Vp2S01_0665 SM00354 helix_turn _helix lactose operon repressor Vp2S01_0670 SM00354 helix_turn _helix lactose operon repressor Vp2S01_0673 SM00354 helix_turn _helix lactose operon repressor Vp2S01_0679 SM00420 helix_turn_helix, Deoxyribose operon repressor Vp2S01_0679 SM01134 Vp2S01_0679 Vp2S01_0696 SM00925 MltA specific insert domain Vp2S01_0699 SM00267 diguanylate cyclase Vp2S01_0716 SM00900 Vp2S01_0716 Vp2S01_0724 SM00487 DEAD-like helicases superfamily Vp2S01_0724 SM00490 helicase superfamily c-terminal domain Vp2S01_0727 SM00495 Chitin-binding domain type 3 Vp2S01_0727 SM00636 Vp2S01_0727 Vp2S01_0744 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_0753 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vp2S01_0755 SM00935 Outer membrane protein (OmpH-like) Vp2S01_0761 SM00481 DNA polymerase alpha chain like domain Vp2S01_0763 SM00977 TilS substrate C-terminal domain Vp2S01_0765 SM00938 Nitrogen regulatory protein P-II Vp2S01_0768 SM00257 Lysin motif Vp2S01_0769 SM00849 Metallo-beta-lactamase superfamily Vp2S01_0772 SM00479 Vp2S01_0772 Vp2S01_0786 SM00028 Tetratricopeptide repeats Vp2S01_0791 SM01130 Vp2S01_0791 Vp2S01_0811 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0812 SM00387 Histidine kinase-like ATPases Vp2S01_0812 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_0813 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0813 SM00448 cheY-homologous receiver domain Vp2S01_0818 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0830 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0830 SM00962 SRP54-type protein, GTPase domain Vp2S01_0833 SM00448 cheY-homologous receiver domain Vp2S01_0835 SM00073 Histidine Phosphotransfer domain Vp2S01_0835 SM00260 Two component signalling adaptor domain Vp2S01_0835 SM00387 Histidine kinase-like ATPases Vp2S01_0835 SM01231 Vp2S01_0835 Vp2S01_0836 SM00448 cheY-homologous receiver domain Vp2S01_0838 SM00260 Two component signalling adaptor domain Vp2S01_0839 SM00260 Two component signalling adaptor domain Vp2S01_0841 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0859 SM00855 Phosphoglycerate mutase family Vp2S01_0860 SM00463 Small MutS-related domain Vp2S01_0869 SM00825 Beta-ketoacyl synthase Vp2S01_0871 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0880 SM00448 cheY-homologous receiver domain Vp2S01_0884 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0886 SM00493 Vp2S01_0886 Vp2S01_0899 SM00098 Alkaline phosphatase homologues Vp2S01_0903 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_0905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_0909 SM00870 Vp2S01_0909 Vp2S01_0913 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vp2S01_0913 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vp2S01_0913 SM00493 Vp2S01_0913 Vp2S01_0933 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vp2S01_0943 SM00479 Vp2S01_0943 Vp2S01_0947 SM00478 endonuclease III Vp2S01_0947 SM00525 Vp2S01_0947 Vp2S01_0949 SM00900 Vp2S01_0949 Vp2S01_0954 SM00487 DEAD-like helicases superfamily Vp2S01_0954 SM00490 helicase superfamily c-terminal domain Vp2S01_0955 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0955 SM00448 cheY-homologous receiver domain Vp2S01_0958 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_0959 SM00852 Probable molybdopterin binding domain Vp2S01_0967 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0968 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0977 SM00382 ATPases associated with a variety of cellular activities Vp2S01_0978 SM00642 Alpha-amylase domain Vp2S01_0979 SM00267 diguanylate cyclase Vp2S01_0985 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_0992 SM00226 Low molecular weight phosphatase family Vp2S01_0994 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_0996 SM00363 S4 RNA-binding domain Vp2S01_1002 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Vp2S01_1003 SM00822 Vp2S01_1003 Vp2S01_1005 SM00825 Beta-ketoacyl synthase Vp2S01_1018 SM00260 Two component signalling adaptor domain Vp2S01_1018 SM00448 cheY-homologous receiver domain Vp2S01_1019 SM00481 DNA polymerase alpha chain like domain Vp2S01_1022 SM00822 Vp2S01_1022 Vp2S01_1025 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_1026 SM00411 bacterial (prokaryotic) histone like domain Vp2S01_1028 SM00028 Tetratricopeptide repeats Vp2S01_1029 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Vp2S01_1041 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1044 SM00387 Histidine kinase-like ATPases Vp2S01_1044 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1045 SM00421 helix_turn_helix, Lux Regulon Vp2S01_1045 SM00448 cheY-homologous receiver domain Vp2S01_1057 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1059 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_1067 SM00220 Serine/Threonine protein kinases, catalytic domain Vp2S01_1067 SM00364 Leucine-rich repeats, bacterial type Vp2S01_1067 SM00369 Leucine-rich repeats, typical (most populated) subfamily Vp2S01_1069 SM00387 Histidine kinase-like ATPases Vp2S01_1069 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1070 SM00448 cheY-homologous receiver domain Vp2S01_1070 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_1071 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1071 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_1072 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_1073 SM00052 Putative diguanylate phosphodiesterase Vp2S01_1073 SM00091 PAS domain Vp2S01_1083 SM00387 Histidine kinase-like ATPases Vp2S01_1083 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1083 SM00448 cheY-homologous receiver domain Vp2S01_1087 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1087 SM00419 helix_turn_helix, cAMP Regulatory protein Vp2S01_1095 SM00481 DNA polymerase alpha chain like domain Vp2S01_1098 SM00363 S4 RNA-binding domain Vp2S01_1100 SM00841 Elongation factor P, C-terminal Vp2S01_1100 SM01185 Vp2S01_1100 Vp2S01_1102 SM00486 DNA polymerase type-B family Vp2S01_1103 SM00421 helix_turn_helix, Lux Regulon Vp2S01_1103 SM00448 cheY-homologous receiver domain Vp2S01_1104 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vp2S01_1104 SM00465 GIY-YIG type nucleases (URI domain) Vp2S01_1112 SM00852 Probable molybdopterin binding domain Vp2S01_1117 SM00434 DNA Topoisomerase IV Vp2S01_1135 SM00849 Metallo-beta-lactamase superfamily Vp2S01_1141 SM00387 Histidine kinase-like ATPases Vp2S01_1141 SM01049 Vp2S01_1141 Vp2S01_1142 SM00421 helix_turn_helix, Lux Regulon Vp2S01_1142 SM00448 cheY-homologous receiver domain Vp2S01_1143 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_1145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_1146 SM00479 Vp2S01_1146 Vp2S01_1147 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1147 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_1152 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_1155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_1159 SM00052 Putative diguanylate phosphodiesterase Vp2S01_1164 SM00387 Histidine kinase-like ATPases Vp2S01_1164 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1164 SM00448 cheY-homologous receiver domain Vp2S01_1170 SM00091 PAS domain Vp2S01_1170 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1209 SM00357 Cold shock protein domain Vp2S01_1212 SM00028 Tetratricopeptide repeats Vp2S01_1216 SM00357 Cold shock protein domain Vp2S01_1295 SM00974 Vp2S01_1295 Vp2S01_1353 SM00954 Region found in RelA / SpoT proteins Vp2S01_1377 SM01230 Vp2S01_1377 Vp2S01_1379 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_1386 SM01131 Vp2S01_1386 Vp2S01_1387 SM00052 Putative diguanylate phosphodiesterase Vp2S01_1389 SM00635 Bacterial Ig-like domain 2 Vp2S01_1390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_1391 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_1393 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_1396 SM01118 Vp2S01_1396 Vp2S01_1398 SM01266 Vp2S01_1398 Vp2S01_1401 SM00387 Histidine kinase-like ATPases Vp2S01_1401 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1401 SM00448 cheY-homologous receiver domain Vp2S01_1402 SM00052 Putative diguanylate phosphodiesterase Vp2S01_1402 SM00267 diguanylate cyclase Vp2S01_1402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_1405 SM00028 Tetratricopeptide repeats Vp2S01_1420 SM00387 Histidine kinase-like ATPases Vp2S01_1420 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1421 SM00448 cheY-homologous receiver domain Vp2S01_1421 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_1423 SM00822 Vp2S01_1423 Vp2S01_1424 SM01236 Vp2S01_1424 Vp2S01_1429 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1430 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1430 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_1431 SM00479 Vp2S01_1431 Vp2S01_1438 SM00671 Sel1-like repeats. Vp2S01_1444 SM00091 PAS domain Vp2S01_1444 SM00387 Histidine kinase-like ATPases Vp2S01_1445 SM00448 cheY-homologous receiver domain Vp2S01_1448 SM01350 Vp2S01_1448 Vp2S01_1452 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1457 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_1487 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1507 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_1507 SM00895 Vp2S01_1507 Vp2S01_1514 SM00020 Trypsin-like serine protease Vp2S01_1514 SM00495 Chitin-binding domain type 3 Vp2S01_1519 SM00028 Tetratricopeptide repeats Vp2S01_1519 SM00267 diguanylate cyclase Vp2S01_1523 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_1523 SM00736 Dystroglycan-type cadherin-like domains. Vp2S01_1527 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Vp2S01_1529 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1535 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1538 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_1544 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_1548 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1550 SM00945 ProQ/FINO family Vp2S01_1551 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vp2S01_1551 SM00245 tail specific protease Vp2S01_1557 SM00981 Vp2S01_1557 Vp2S01_1559 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1571 SM00387 Histidine kinase-like ATPases Vp2S01_1571 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1571 SM00448 cheY-homologous receiver domain Vp2S01_1572 SM00897 FIST N domain Vp2S01_1572 SM01204 Vp2S01_1572 Vp2S01_1582 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1582 SM00419 helix_turn_helix, cAMP Regulatory protein Vp2S01_1588 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1602 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1609 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1610 SM00387 Histidine kinase-like ATPases Vp2S01_1610 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1611 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1611 SM00448 cheY-homologous receiver domain Vp2S01_1614 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1616 SM00852 Probable molybdopterin binding domain Vp2S01_1619 SM01144 Vp2S01_1619 Vp2S01_1626 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1629 SM00267 diguanylate cyclase Vp2S01_1630 SM00448 cheY-homologous receiver domain Vp2S01_1642 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1642 SM00448 cheY-homologous receiver domain Vp2S01_1657 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1657 SM00487 DEAD-like helicases superfamily Vp2S01_1657 SM00490 helicase superfamily c-terminal domain Vp2S01_1657 SM00847 Helicase associated domain (HA2) Add an annotation Vp2S01_1663 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_1668 SM00479 Vp2S01_1668 Vp2S01_1669 SM00267 diguanylate cyclase Vp2S01_1669 SM01079 Vp2S01_1669 Vp2S01_1677 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1678 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_1686 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Vp2S01_1698 SM00240 Forkhead associated domain Vp2S01_1709 SM00220 Serine/Threonine protein kinases, catalytic domain Vp2S01_1716 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1716 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_1717 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1728 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_1729 SM00052 Putative diguanylate phosphodiesterase Vp2S01_1729 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_1729 SM00091 PAS domain Vp2S01_1729 SM00267 diguanylate cyclase Vp2S01_1730 SM00448 cheY-homologous receiver domain Vp2S01_1731 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1731 SM00387 Histidine kinase-like ATPases Vp2S01_1736 SM00855 Phosphoglycerate mutase family Vp2S01_1761 SM00635 Bacterial Ig-like domain 2 Vp2S01_1805 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_1806 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_1823 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1824 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1826 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vp2S01_1831 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1832 SM01130 Vp2S01_1832 Vp2S01_1838 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_1838 SM00895 Vp2S01_1838 Vp2S01_1840 SM00245 tail specific protease Vp2S01_1849 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1854 SM00855 Phosphoglycerate mutase family Vp2S01_1861 SM00479 Vp2S01_1861 Vp2S01_1868 SM00411 bacterial (prokaryotic) histone like domain Vp2S01_1870 SM00873 B3/4 domain Vp2S01_1870 SM00874 tRNA synthetase B5 domain Vp2S01_1870 SM00896 Ferredoxin-fold anticodon binding domain Vp2S01_1872 SM00267 diguanylate cyclase Vp2S01_1877 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_1882 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Vp2S01_1885 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_1885 SM00866 Vp2S01_1885 Vp2S01_1903 SM00487 DEAD-like helicases superfamily Vp2S01_1903 SM00490 helicase superfamily c-terminal domain Vp2S01_1903 SM00847 Helicase associated domain (HA2) Add an annotation Vp2S01_1904 SM00919 Malic enzyme, NAD binding domain Vp2S01_1904 SM01274 Vp2S01_1904 Vp2S01_1908 SM00267 diguanylate cyclase Vp2S01_1914 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1915 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1919 SM00100 Cyclic nucleotide-monophosphate binding domain Vp2S01_1919 SM00387 Histidine kinase-like ATPases Vp2S01_1920 SM00448 cheY-homologous receiver domain Vp2S01_1938 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1948 SM00363 S4 RNA-binding domain Vp2S01_1949 SM00487 DEAD-like helicases superfamily Vp2S01_1949 SM00490 helicase superfamily c-terminal domain Vp2S01_1951 SM00448 cheY-homologous receiver domain Vp2S01_1951 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_1952 SM00387 Histidine kinase-like ATPases Vp2S01_1959 SM00421 helix_turn_helix, Lux Regulon Vp2S01_1959 SM00448 cheY-homologous receiver domain Vp2S01_1960 SM00387 Histidine kinase-like ATPases Vp2S01_1960 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_1961 SM00450 Rhodanese Homology Domain Vp2S01_1967 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vp2S01_1970 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_1975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_1978 SM00155 Phospholipase D. Active site motifs. Vp2S01_1989 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1993 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1994 SM00382 ATPases associated with a variety of cellular activities Vp2S01_1996 SM01131 Vp2S01_1996 Vp2S01_2012 SM00840 Vp2S01_2012 Vp2S01_2015 SM00052 Putative diguanylate phosphodiesterase Vp2S01_2025 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2028 SM00528 Domain in histone-like proteins of HNS family Vp2S01_2047 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_2047 SM00876 Biotin and Thiamin Synthesis associated domain Vp2S01_2053 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2055 SM00843 Vp2S01_2055 Vp2S01_2056 SM00344 helix_turn_helix ASNC type Vp2S01_2057 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Vp2S01_2057 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Vp2S01_2067 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_2070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_2070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_2082 SM00387 Histidine kinase-like ATPases Vp2S01_2082 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2082 SM00448 cheY-homologous receiver domain Vp2S01_2089 SM00028 Tetratricopeptide repeats Vp2S01_2099 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vp2S01_2101 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_2116 SM00448 cheY-homologous receiver domain Vp2S01_2116 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2118 SM00354 helix_turn _helix lactose operon repressor Vp2S01_2125 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vp2S01_2125 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vp2S01_2125 SM00493 Vp2S01_2125 Vp2S01_2131 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_2133 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2133 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_2135 SM00357 Cold shock protein domain Vp2S01_2140 SM00491 Vp2S01_2140 Vp2S01_2145 SM01276 Vp2S01_2145 Vp2S01_2148 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_2148 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vp2S01_2149 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2157 SM00763 PrkA AAA domain Vp2S01_2163 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2164 SM00849 Metallo-beta-lactamase superfamily Vp2S01_2167 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2170 SM00487 DEAD-like helicases superfamily Vp2S01_2170 SM00490 helicase superfamily c-terminal domain Vp2S01_2170 SM00982 Vp2S01_2170 Vp2S01_2170 SM01058 CarD-like/TRCF domain Vp2S01_2180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_2180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_2184 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_2188 SM00736 Dystroglycan-type cadherin-like domains. Vp2S01_2205 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_2205 SM00267 diguanylate cyclase Vp2S01_2212 SM00344 helix_turn_helix ASNC type Vp2S01_2219 SM00978 Vp2S01_2219 Vp2S01_2221 SM00563 Phosphate acyltransferases Vp2S01_2225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Vp2S01_2231 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_2232 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_2233 SM01144 Vp2S01_2233 Vp2S01_2235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vp2S01_2237 SM00411 bacterial (prokaryotic) histone like domain Vp2S01_2238 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2238 SM00464 Found in ATP-dependent protease La (LON) Vp2S01_2239 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2239 SM00994 ClpX C4-type zinc finger Vp2S01_2239 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_2242 SM00387 Histidine kinase-like ATPases Vp2S01_2242 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2243 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2243 SM00448 cheY-homologous receiver domain Vp2S01_2249 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vp2S01_2253 SM00487 DEAD-like helicases superfamily Vp2S01_2253 SM00490 helicase superfamily c-terminal domain Vp2S01_2254 SM01091 Transporter associated domain Vp2S01_2260 SM00563 Phosphate acyltransferases Vp2S01_2272 SM00825 Beta-ketoacyl synthase Vp2S01_2274 SM00822 Vp2S01_2274 Vp2S01_2275 SM00825 Beta-ketoacyl synthase Vp2S01_2286 SM00474 3'-5' exonuclease Vp2S01_2292 SM00487 DEAD-like helicases superfamily Vp2S01_2292 SM00491 Vp2S01_2292 Vp2S01_2295 SM00836 DALR anticodon binding domain Vp2S01_2295 SM01016 Arginyl tRNA synthetase N terminal dom Vp2S01_2299 SM00899 Vp2S01_2299 Vp2S01_2301 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_2303 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2305 SM00881 CoA binding domain Vp2S01_2308 SM00861 Transketolase, pyrimidine binding domain Vp2S01_2329 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Vp2S01_2333 SM00387 Histidine kinase-like ATPases Vp2S01_2334 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2339 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_2340 SM00938 Nitrogen regulatory protein P-II Vp2S01_2346 SM00244 prohibitin homologues Vp2S01_2349 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vp2S01_2349 SM00292 breast cancer carboxy-terminal domain Vp2S01_2349 SM00532 Ligase N family Vp2S01_2350 SM00771 ZipA, C-terminal domain (FtsZ-binding) Vp2S01_2362 SM00047 Lysozyme subfamily 2 Vp2S01_2372 SM00138 Methyltransferase, chemotaxis proteins Vp2S01_2373 SM00260 Two component signalling adaptor domain Vp2S01_2373 SM00448 cheY-homologous receiver domain Vp2S01_2374 SM00858 Vp2S01_2374 Vp2S01_2390 SM01081 Putative carbohydrate binding domain Vp2S01_2393 SM00463 Small MutS-related domain Vp2S01_2394 SM00363 S4 RNA-binding domain Vp2S01_2401 SM00937 Vp2S01_2401 Vp2S01_2405 SM01400 Vp2S01_2405 Vp2S01_2411 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_2414 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_2414 SM01091 Transporter associated domain Vp2S01_2425 SM00936 Penicillin-binding protein 5, C-terminal domain Vp2S01_2428 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_2431 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2433 SM00642 Alpha-amylase domain Vp2S01_2435 SM00354 helix_turn _helix lactose operon repressor Vp2S01_2438 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2438 SM00930 Vp2S01_2438 Vp2S01_2444 SM00028 Tetratricopeptide repeats Vp2S01_2445 SM00267 diguanylate cyclase Vp2S01_2447 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Vp2S01_2447 SM00475 5'-3' exonuclease Vp2S01_2448 SM00477 DNA/RNA non-specific endonuclease Vp2S01_2448 SM00892 DNA/RNA non-specific endonuclease Vp2S01_2453 SM00981 Vp2S01_2453 Vp2S01_2459 SM00861 Transketolase, pyrimidine binding domain Vp2S01_2469 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Vp2S01_2479 SM01211 Vp2S01_2479 Vp2S01_2480 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_2490 SM00271 DnaJ molecular chaperone homology domain Vp2S01_2503 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2504 SM00487 DEAD-like helicases superfamily Vp2S01_2523 SM00857 Resolvase, N terminal domain Vp2S01_2542 SM00495 Chitin-binding domain type 3 Vp2S01_2546 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_2546 SM01240 Vp2S01_2546 Vp2S01_2550 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2551 SM00564 beta-propeller repeat Vp2S01_2555 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_2557 SM00562 Vp2S01_2557 Vp2S01_2562 SM00271 DnaJ molecular chaperone homology domain Vp2S01_2571 SM01323 Vp2S01_2571 Vp2S01_2574 SM00020 Trypsin-like serine protease Vp2S01_2575 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_2583 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2589 SM00091 PAS domain Vp2S01_2589 SM00387 Histidine kinase-like ATPases Vp2S01_2589 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2590 SM00448 cheY-homologous receiver domain Vp2S01_2590 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2602 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2602 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_2604 SM00363 S4 RNA-binding domain Vp2S01_2606 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_2608 SM00830 Chorismate mutase type II Vp2S01_2612 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2615 SM00830 Chorismate mutase type II Vp2S01_2624 SM00448 cheY-homologous receiver domain Vp2S01_2624 SM00850 LytTr DNA-binding domain Vp2S01_2629 SM00904 Riboflavin kinase Vp2S01_2632 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vp2S01_2635 SM01154 Vp2S01_2635 Vp2S01_2639 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vp2S01_2641 SM00927 DNA mismatch repair enzyme MutH Vp2S01_2645 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2647 SM00937 Vp2S01_2647 Vp2S01_2654 SM00487 DEAD-like helicases superfamily Vp2S01_2654 SM00490 helicase superfamily c-terminal domain Vp2S01_2659 SM00986 Uracil DNA glycosylase superfamily Vp2S01_2659 SM00987 UreE urease accessory protein, C-terminal domain Vp2S01_2660 SM00518 AP endonuclease family 2 Vp2S01_2668 SM00448 cheY-homologous receiver domain Vp2S01_2668 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2670 SM00073 Histidine Phosphotransfer domain Vp2S01_2670 SM00091 PAS domain Vp2S01_2670 SM00387 Histidine kinase-like ATPases Vp2S01_2670 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2670 SM00448 cheY-homologous receiver domain Vp2S01_2671 SM00091 PAS domain Vp2S01_2671 SM00267 diguanylate cyclase Vp2S01_2672 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_2684 SM00851 MGS-like domain Vp2S01_2684 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vp2S01_2685 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Vp2S01_2688 SM00957 SecA DEAD-like domain Vp2S01_2688 SM00958 SecA preprotein cross-linking domain Vp2S01_2691 SM00864 Tubulin/FtsZ family, GTPase domain Vp2S01_2691 SM00865 Tubulin/FtsZ family, C-terminal domain Vp2S01_2692 SM00842 Cell division protein FtsA Vp2S01_2708 SM00749 bacterial OsmY and nodulation domain Vp2S01_2719 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vp2S01_2720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vp2S01_2721 SM00434 DNA Topoisomerase IV Vp2S01_2722 SM00387 Histidine kinase-like ATPases Vp2S01_2722 SM00433 TopoisomeraseII Vp2S01_2730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_2732 SM00880 Vp2S01_2732 Vp2S01_2732 SM01118 Vp2S01_2732 Vp2S01_2735 SM00287 Bacterial SH3 domain homologues Vp2S01_2737 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2741 SM00905 Dihydroneopterin aldolase Vp2S01_2742 SM01207 Vp2S01_2742 Vp2S01_2747 SM00400 zinc finger Vp2S01_2747 SM00493 Vp2S01_2747 Vp2S01_2747 SM00766 DNA primase DnaG DnaB-binding Vp2S01_2754 SM00563 Phosphate acyltransferases Vp2S01_2760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_2760 SM00387 Histidine kinase-like ATPases Vp2S01_2760 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2761 SM00448 cheY-homologous receiver domain Vp2S01_2761 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2764 SM00420 helix_turn_helix, Deoxyribose operon repressor Vp2S01_2764 SM01134 Vp2S01_2764 Vp2S01_2766 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_2767 SM00267 diguanylate cyclase Vp2S01_2773 SM00014 Acid phosphatase homologues Vp2S01_2774 SM00287 Bacterial SH3 domain homologues Vp2S01_2775 SM00917 LeuA allosteric (dimerisation) domain Vp2S01_2776 SM01329 Vp2S01_2776 Vp2S01_2780 SM00271 DnaJ molecular chaperone homology domain Vp2S01_2784 SM00650 Ribosomal RNA adenine dimethylases Vp2S01_2801 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2817 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2828 SM00487 DEAD-like helicases superfamily Vp2S01_2828 SM00490 helicase superfamily c-terminal domain Vp2S01_2834 SM00662 RNA polymerases D Vp2S01_2835 SM00363 S4 RNA-binding domain Vp2S01_2835 SM01390 Vp2S01_2835 Vp2S01_2848 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Vp2S01_2849 SM01374 Vp2S01_2849 Vp2S01_2853 SM00322 K homology RNA-binding domain Vp2S01_2856 SM01382 Vp2S01_2856 Vp2S01_2856 SM01383 Vp2S01_2856 Vp2S01_2860 SM01403 Vp2S01_2860 Vp2S01_2862 SM00487 DEAD-like helicases superfamily Vp2S01_2862 SM00490 helicase superfamily c-terminal domain Vp2S01_2863 SM00354 helix_turn _helix lactose operon repressor Vp2S01_2866 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2866 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_2886 SM00849 Metallo-beta-lactamase superfamily Vp2S01_2886 SM01027 Beta-Casp domain Vp2S01_2888 SM00984 UDP binding domain Vp2S01_2932 SM00672 Putative lipopolysaccharide-modifying enzyme. Vp2S01_2933 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Vp2S01_2933 SM01232 Vp2S01_2933 Vp2S01_2938 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_2938 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_2938 SM01049 Vp2S01_2938 Vp2S01_2949 SM00387 Histidine kinase-like ATPases Vp2S01_2958 SM00257 Lysin motif Vp2S01_2966 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2967 SM00382 ATPases associated with a variety of cellular activities Vp2S01_2977 SM00028 Tetratricopeptide repeats Vp2S01_2978 SM00072 Guanylate kinase homologues. Vp2S01_2979 SM01409 Vp2S01_2979 Vp2S01_2980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_2980 SM00954 Region found in RelA / SpoT proteins Vp2S01_2982 SM00487 DEAD-like helicases superfamily Vp2S01_2982 SM00490 helicase superfamily c-terminal domain Vp2S01_2985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_2985 SM00387 Histidine kinase-like ATPases Vp2S01_2985 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_2986 SM00448 cheY-homologous receiver domain Vp2S01_2986 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_2990 SM00316 Ribosomal protein S1-like RNA-binding domain Vp2S01_2990 SM00732 Likely ribonuclease with RNase H fold. Vp2S01_3006 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3020 SM01230 Vp2S01_3020 Vp2S01_3022 SM00091 PAS domain Vp2S01_3022 SM00387 Histidine kinase-like ATPases Vp2S01_3022 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_3023 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3023 SM00448 cheY-homologous receiver domain Vp2S01_3024 SM00052 Putative diguanylate phosphodiesterase Vp2S01_3024 SM00267 diguanylate cyclase Vp2S01_3024 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_3026 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_3032 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Vp2S01_3032 SM00474 3'-5' exonuclease Vp2S01_3032 SM00475 5'-3' exonuclease Vp2S01_3032 SM00482 DNA polymerase A domain Vp2S01_3034 SM01004 Delta-aminolevulinic acid dehydratase Vp2S01_3045 SM00052 Putative diguanylate phosphodiesterase Vp2S01_3045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_3045 SM00091 PAS domain Vp2S01_3045 SM00267 diguanylate cyclase Vp2S01_3052 SM00046 Diacylglycerol kinase catalytic domain (presumed) Vp2S01_3052 SM00195 Dual specificity phosphatase, catalytic domain Vp2S01_3052 SM00404 Protein tyrosine phosphatase, catalytic domain motif Vp2S01_3056 SM00749 bacterial OsmY and nodulation domain Vp2S01_3057 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3065 SM00052 Putative diguanylate phosphodiesterase Vp2S01_3065 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_3065 SM00091 PAS domain Vp2S01_3065 SM00267 diguanylate cyclase Vp2S01_3066 SM00344 helix_turn_helix ASNC type Vp2S01_3079 SM00354 helix_turn _helix lactose operon repressor Vp2S01_3080 SM00220 Serine/Threonine protein kinases, catalytic domain Vp2S01_3089 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3107 SM01001 AIR carboxylase Vp2S01_3113 SM00257 Lysin motif Vp2S01_3128 SM00563 Phosphate acyltransferases Vp2S01_3130 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3138 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_3142 SM00382 ATPases associated with a variety of cellular activities Vp2S01_3150 SM00470 ParB-like nuclease domain Vp2S01_3153 SM01228 Vp2S01_3153 Vp2S01_A0004 SM00387 Histidine kinase-like ATPases Vp2S01_A0005 SM00448 cheY-homologous receiver domain Vp2S01_A0005 SM00850 LytTr DNA-binding domain Vp2S01_A0008 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0008 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0008 SM01049 Vp2S01_A0008 Vp2S01_A0015 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0016 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A0026 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0026 SM01009 AlkA N-terminal domain Vp2S01_A0036 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vp2S01_A0036 SM00495 Chitin-binding domain type 3 Vp2S01_A0036 SM00636 Vp2S01_A0036 Vp2S01_A0040 SM00267 diguanylate cyclase Vp2S01_A0045 SM00849 Metallo-beta-lactamase superfamily Vp2S01_A0049 SM00267 diguanylate cyclase Vp2S01_A0052 SM00829 Enoylreductase Vp2S01_A0055 SM00479 Vp2S01_A0055 Vp2S01_A0056 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_A0057 SM00346 helix_turn_helix isocitrate lyase regulation Vp2S01_A0072 SM00344 helix_turn_helix ASNC type Vp2S01_A0073 SM00495 Chitin-binding domain type 3 Vp2S01_A0085 SM00506 Appr-1"-p processing enzyme Vp2S01_A0105 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A0112 SM00822 Vp2S01_A0112 Vp2S01_A0116 SM00014 Acid phosphatase homologues Vp2S01_A0122 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0134 SM00448 cheY-homologous receiver domain Vp2S01_A0134 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A0135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0135 SM00387 Histidine kinase-like ATPases Vp2S01_A0135 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A0142 SM00028 Tetratricopeptide repeats Vp2S01_A0149 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0158 SM00849 Metallo-beta-lactamase superfamily Vp2S01_A0165 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0171 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_A0171 SM00387 Histidine kinase-like ATPases Vp2S01_A0172 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0172 SM00448 cheY-homologous receiver domain Vp2S01_A0173 SM00267 diguanylate cyclase Vp2S01_A0185 SM00267 diguanylate cyclase Vp2S01_A0185 SM01079 Vp2S01_A0185 Vp2S01_A0186 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0187 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A0189 SM00267 diguanylate cyclase Vp2S01_A0195 SM01266 Vp2S01_A0195 Vp2S01_A0207 SM01057 Eukaryotic-type carbonic anhydrase Vp2S01_A0211 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0219 SM00354 helix_turn _helix lactose operon repressor Vp2S01_A0225 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0227 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A0227 SM00866 Vp2S01_A0227 Vp2S01_A0232 SM00631 Vp2S01_A0232 Vp2S01_A0248 SM00858 Vp2S01_A0248 Vp2S01_A0264 SM01240 Vp2S01_A0264 Vp2S01_A0270 SM00450 Rhodanese Homology Domain Vp2S01_A0271 SM00883 Chaperonin 10 Kd subunit Vp2S01_A0289 SM00420 helix_turn_helix, Deoxyribose operon repressor Vp2S01_A0289 SM01134 Vp2S01_A0289 Vp2S01_A0291 SM01060 Vp2S01_A0291 Vp2S01_A0292 SM00248 ankyrin repeats Vp2S01_A0312 SM00838 Elongation factor G C-terminus Vp2S01_A0312 SM00889 Elongation factor G, domain IV Vp2S01_A0313 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Vp2S01_A0318 SM00422 helix_turn_helix, mercury resistance Vp2S01_A0320 SM00028 Tetratricopeptide repeats Vp2S01_A0321 SM01022 Vp2S01_A0321 Vp2S01_A0323 SM00155 Phospholipase D. Active site motifs. Vp2S01_A0329 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0334 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A0334 SM00866 Vp2S01_A0334 Vp2S01_A0337 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A0338 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A0339 SM00267 diguanylate cyclase Vp2S01_A0348 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A0353 SM00870 Vp2S01_A0353 Vp2S01_A0354 SM00788 Adenylosuccinate synthetase Vp2S01_A0361 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0364 SM00829 Enoylreductase Vp2S01_A0370 SM00487 DEAD-like helicases superfamily Vp2S01_A0370 SM00490 helicase superfamily c-terminal domain Vp2S01_A0380 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0380 SM00871 Bacterial transcription activator, effector binding domain Vp2S01_A0384 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0399 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0405 SM00729 Elongator protein 3, MiaB family, Radical SAM Vp2S01_A0410 SM00260 Two component signalling adaptor domain Vp2S01_A0410 SM00448 cheY-homologous receiver domain Vp2S01_A0413 SM00857 Resolvase, N terminal domain Vp2S01_A0415 SM00857 Resolvase, N terminal domain Vp2S01_A0429 SM00128 Inositol polyphosphate phosphatase, catalytic domain homologues Vp2S01_A0442 SM00642 Alpha-amylase domain Vp2S01_A0443 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vp2S01_A0448 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0457 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vp2S01_A0457 SM00267 diguanylate cyclase Vp2S01_A0466 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_A0471 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0474 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0479 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0481 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vp2S01_A0488 SM00481 DNA polymerase alpha chain like domain Vp2S01_A0490 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A0494 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0500 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0500 SM00267 diguanylate cyclase Vp2S01_A0512 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0530 SM01322 Vp2S01_A0530 Vp2S01_A0531 SM00357 Cold shock protein domain Vp2S01_A0533 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_A0533 SM00091 PAS domain Vp2S01_A0533 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0534 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_A0534 SM00267 diguanylate cyclase Vp2S01_A0538 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0541 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0541 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0562 SM00487 DEAD-like helicases superfamily Vp2S01_A0562 SM00490 helicase superfamily c-terminal domain Vp2S01_A0568 SM00833 Cobalamin synthesis protein cobW C-terminal domain Vp2S01_A0569 SM00487 DEAD-like helicases superfamily Vp2S01_A0569 SM00490 helicase superfamily c-terminal domain Vp2S01_A0573 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0574 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0584 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0585 SM00357 Cold shock protein domain Vp2S01_A0585 SM00955 Vp2S01_A0585 Vp2S01_A0586 SM00487 DEAD-like helicases superfamily Vp2S01_A0586 SM00490 helicase superfamily c-terminal domain Vp2S01_A0587 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0587 SM00267 diguanylate cyclase Vp2S01_A0589 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_A0589 SM00091 PAS domain Vp2S01_A0589 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0596 SM00422 helix_turn_helix, mercury resistance Vp2S01_A0603 SM00822 Vp2S01_A0603 Vp2S01_A0623 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0624 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_A0632 SM00861 Transketolase, pyrimidine binding domain Vp2S01_A0645 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0646 SM00422 helix_turn_helix, mercury resistance Vp2S01_A0648 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0658 SM00851 MGS-like domain Vp2S01_A0660 SM00073 Histidine Phosphotransfer domain Vp2S01_A0660 SM00387 Histidine kinase-like ATPases Vp2S01_A0660 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A0660 SM00448 cheY-homologous receiver domain Vp2S01_A0663 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A0666 SM00028 Tetratricopeptide repeats Vp2S01_A0673 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_A0674 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_A0678 SM00046 Diacylglycerol kinase catalytic domain (presumed) Vp2S01_A0683 SM00028 Tetratricopeptide repeats Vp2S01_A0684 SM00990 Vp2S01_A0684 Vp2S01_A0693 SM00387 Histidine kinase-like ATPases Vp2S01_A0693 SM00448 cheY-homologous receiver domain Vp2S01_A0710 SM01007 Class II Aldolase and Adducin N-terminal domain Vp2S01_A0716 SM00420 helix_turn_helix, Deoxyribose operon repressor Vp2S01_A0716 SM01134 Vp2S01_A0716 Vp2S01_A0735 SM00257 Lysin motif Vp2S01_A0738 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0759 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0762 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0793 SM00028 Tetratricopeptide repeats Vp2S01_A0802 SM00487 DEAD-like helicases superfamily Vp2S01_A0802 SM00490 helicase superfamily c-terminal domain Vp2S01_A0804 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_A0809 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0812 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0826 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_A0832 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_A0832 SM00387 Histidine kinase-like ATPases Vp2S01_A0832 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A0832 SM00448 cheY-homologous receiver domain Vp2S01_A0833 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0833 SM00448 cheY-homologous receiver domain Vp2S01_A0834 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A0834 SM00448 cheY-homologous receiver domain Vp2S01_A0835 SM00267 diguanylate cyclase Vp2S01_A0837 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A0837 SM00448 cheY-homologous receiver domain Vp2S01_A0838 SM00448 cheY-homologous receiver domain Vp2S01_A0841 SM00260 Two component signalling adaptor domain Vp2S01_A0841 SM00448 cheY-homologous receiver domain Vp2S01_A0846 SM00014 Acid phosphatase homologues Vp2S01_A0858 SM00387 Histidine kinase-like ATPases Vp2S01_A0859 SM00448 cheY-homologous receiver domain Vp2S01_A0861 SM00704 CDGSH-type zinc finger. Function unknown. Vp2S01_A0865 SM00953 Vp2S01_A0865 Vp2S01_A0874 SM00924 MgtE intracellular N domain Vp2S01_A0879 SM00422 helix_turn_helix, mercury resistance Vp2S01_A0887 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0888 SM00479 Vp2S01_A0888 Vp2S01_A0899 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A0909 SM00354 helix_turn _helix lactose operon repressor Vp2S01_A0913 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0915 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_A0915 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vp2S01_A0917 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0921 SM00387 Histidine kinase-like ATPases Vp2S01_A0921 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A0922 SM00448 cheY-homologous receiver domain Vp2S01_A0925 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A0926 SM00495 Chitin-binding domain type 3 Vp2S01_A0926 SM00636 Vp2S01_A0926 Vp2S01_A0932 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_A0935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A0938 SM00487 DEAD-like helicases superfamily Vp2S01_A0938 SM00490 helicase superfamily c-terminal domain Vp2S01_A0939 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0943 SM00867 YceI-like domain Vp2S01_A0944 SM00116 Domain in cystathionine beta-synthase and other proteins. Vp2S01_A0952 SM00782 PhnA Zinc-Ribbon Vp2S01_A0966 SM00271 DnaJ molecular chaperone homology domain Vp2S01_A0968 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A0968 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vp2S01_A0968 SM00267 diguanylate cyclase Vp2S01_A0971 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A0974 SM00797 Allophanate hydrolase subunit 2 Vp2S01_A0975 SM00796 Allophanate hydrolase subunit 1 Vp2S01_A0977 SM00091 PAS domain Vp2S01_A0977 SM00267 diguanylate cyclase Vp2S01_A0977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A0982 SM00881 CoA binding domain Vp2S01_A0988 SM00479 Vp2S01_A0988 Vp2S01_A1003 SM00448 cheY-homologous receiver domain Vp2S01_A1003 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1004 SM00387 Histidine kinase-like ATPases Vp2S01_A1004 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1006 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Vp2S01_A1006 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Vp2S01_A1009 SM00267 diguanylate cyclase Vp2S01_A1011 SM00267 diguanylate cyclase Vp2S01_A1011 SM00448 cheY-homologous receiver domain Vp2S01_A1013 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1022 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1032 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vp2S01_A1034 SM00450 Rhodanese Homology Domain Vp2S01_A1039 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1039 SM00448 cheY-homologous receiver domain Vp2S01_A1040 SM00387 Histidine kinase-like ATPases Vp2S01_A1049 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1070 SM00880 Vp2S01_A1070 Vp2S01_A1073 SM00642 Alpha-amylase domain Vp2S01_A1074 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1074 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1075 SM01005 Alanine racemase, C-terminal domain Vp2S01_A1081 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A1098 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1105 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1115 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1115 SM01086 C-terminal, D2-small domain, of ClpB protein Vp2S01_A1124 SM00331 Sigma factor PP2C-like phosphatases Vp2S01_A1124 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Vp2S01_A1130 SM00240 Forkhead associated domain Vp2S01_A1131 SM00220 Serine/Threonine protein kinases, catalytic domain Vp2S01_A1132 SM00448 cheY-homologous receiver domain Vp2S01_A1136 SM00331 Sigma factor PP2C-like phosphatases Vp2S01_A1136 SM00448 cheY-homologous receiver domain Vp2S01_A1143 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1147 SM01012 Vp2S01_A1147 Vp2S01_A1155 SM00028 Tetratricopeptide repeats Vp2S01_A1155 SM00267 diguanylate cyclase Vp2S01_A1159 SM00098 Alkaline phosphatase homologues Vp2S01_A1160 SM00871 Bacterial transcription activator, effector binding domain Vp2S01_A1161 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1162 SM00448 cheY-homologous receiver domain Vp2S01_A1162 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1169 SM00354 helix_turn _helix lactose operon repressor Vp2S01_A1173 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1175 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1175 SM00267 diguanylate cyclase Vp2S01_A1189 SM00387 Histidine kinase-like ATPases Vp2S01_A1189 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1189 SM00448 cheY-homologous receiver domain Vp2S01_A1191 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1191 SM00091 PAS domain Vp2S01_A1191 SM00267 diguanylate cyclase Vp2S01_A1193 SM00244 prohibitin homologues Vp2S01_A1196 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1202 SM00028 Tetratricopeptide repeats Vp2S01_A1202 SM00267 diguanylate cyclase Vp2S01_A1203 SM00822 Vp2S01_A1203 Vp2S01_A1210 SM00422 helix_turn_helix, mercury resistance Vp2S01_A1214 SM00878 Biotin carboxylase C-terminal domain Vp2S01_A1216 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vp2S01_A1216 SM00091 PAS domain Vp2S01_A1216 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1216 SM00387 Histidine kinase-like ATPases Vp2S01_A1216 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1216 SM00448 cheY-homologous receiver domain Vp2S01_A1220 SM01266 Vp2S01_A1220 Vp2S01_A1221 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A1234 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1239 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1242 SM00893 Electron transfer flavoprotein domain Vp2S01_A1243 SM00893 Electron transfer flavoprotein domain Vp2S01_A1245 SM01240 Vp2S01_A1245 Vp2S01_A1247 SM00091 PAS domain Vp2S01_A1248 SM00448 cheY-homologous receiver domain Vp2S01_A1257 SM00852 Probable molybdopterin binding domain Vp2S01_A1262 SM00450 Rhodanese Homology Domain Vp2S01_A1263 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1263 SM00267 diguanylate cyclase Vp2S01_A1264 SM00636 Vp2S01_A1264 Vp2S01_A1269 SM00861 Transketolase, pyrimidine binding domain Vp2S01_A1270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1276 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1283 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1283 SM00448 cheY-homologous receiver domain Vp2S01_A1284 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1284 SM00387 Histidine kinase-like ATPases Vp2S01_A1287 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vp2S01_A1294 SM00822 Vp2S01_A1294 Vp2S01_A1303 SM00344 helix_turn_helix ASNC type Vp2S01_A1308 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_A1309 SM00387 Histidine kinase-like ATPases Vp2S01_A1309 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1309 SM00448 cheY-homologous receiver domain Vp2S01_A1311 SM00465 GIY-YIG type nucleases (URI domain) Vp2S01_A1318 SM00387 Histidine kinase-like ATPases Vp2S01_A1318 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1318 SM00448 cheY-homologous receiver domain Vp2S01_A1319 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vp2S01_A1323 SM00344 helix_turn_helix ASNC type Vp2S01_A1325 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A1328 SM00924 MgtE intracellular N domain Vp2S01_A1332 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vp2S01_A1333 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_A1334 SM00563 Phosphate acyltransferases Vp2S01_A1342 SM01065 Starch binding domain Vp2S01_A1344 SM00448 cheY-homologous receiver domain Vp2S01_A1344 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1345 SM00387 Histidine kinase-like ATPases Vp2S01_A1345 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1355 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_A1359 SM00357 Cold shock protein domain Vp2S01_A1364 SM00936 Penicillin-binding protein 5, C-terminal domain Vp2S01_A1375 SM00822 Vp2S01_A1375 Vp2S01_A1385 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1397 SM01022 Vp2S01_A1397 Vp2S01_A1399 SM00829 Enoylreductase Vp2S01_A1401 SM01060 Vp2S01_A1401 Vp2S01_A1406 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1412 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1415 SM00448 cheY-homologous receiver domain Vp2S01_A1415 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1416 SM00387 Histidine kinase-like ATPases Vp2S01_A1416 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1417 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1419 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1427 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1429 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1430 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1432 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1437 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_A1438 SM00327 von Willebrand factor (vWF) type A domain Vp2S01_A1440 SM00267 diguanylate cyclase Vp2S01_A1441 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1446 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1446 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1452 SM00487 DEAD-like helicases superfamily Vp2S01_A1452 SM00490 helicase superfamily c-terminal domain Vp2S01_A1454 SM00257 Lysin motif Vp2S01_A1456 SM00422 helix_turn_helix, mercury resistance Vp2S01_A1460 SM00028 Tetratricopeptide repeats Vp2S01_A1461 SM00267 diguanylate cyclase Vp2S01_A1465 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1474 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1478 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1485 SM01057 Eukaryotic-type carbonic anhydrase Vp2S01_A1486 SM00972 Spore Coat Protein U domain Vp2S01_A1490 SM00972 Spore Coat Protein U domain Vp2S01_A1491 SM00829 Enoylreductase Vp2S01_A1493 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1493 SM00267 diguanylate cyclase Vp2S01_A1494 SM00062 Bacterial periplasmic substrate-binding proteins Vp2S01_A1497 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1498 SM00448 cheY-homologous receiver domain Vp2S01_A1498 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1509 SM00481 DNA polymerase alpha chain like domain Vp2S01_A1513 SM00020 Trypsin-like serine protease Vp2S01_A1515 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1520 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1570 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1571 SM00642 Alpha-amylase domain Vp2S01_A1572 SM00936 Penicillin-binding protein 5, C-terminal domain Vp2S01_A1575 SM00450 Rhodanese Homology Domain Vp2S01_A1581 SM00226 Low molecular weight phosphatase family Vp2S01_A1594 SM00642 Alpha-amylase domain Vp2S01_A1596 SM00642 Alpha-amylase domain Vp2S01_A1601 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1611 SM00966 SpoVT / AbrB like domain Vp2S01_A1615 SM00671 Sel1-like repeats. Vp2S01_A1616 SM00642 Alpha-amylase domain Vp2S01_A1618 SM00642 Alpha-amylase domain Vp2S01_A1622 SM00642 Alpha-amylase domain Vp2S01_A1623 SM00857 Resolvase, N terminal domain Vp2S01_A1629 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1629 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vp2S01_A1630 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1642 SM00387 Histidine kinase-like ATPases Vp2S01_A1643 SM00448 cheY-homologous receiver domain Vp2S01_A1643 SM00862 Transcriptional regulatory protein, C terminal Vp2S01_A1648 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1651 SM01007 Class II Aldolase and Adducin N-terminal domain Vp2S01_A1654 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1658 SM00347 helix_turn_helix multiple antibiotic resistance protein Vp2S01_A1668 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vp2S01_A1671 SM00829 Enoylreductase Vp2S01_A1672 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1674 SM00487 DEAD-like helicases superfamily Vp2S01_A1674 SM00490 helicase superfamily c-terminal domain Vp2S01_A1676 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vp2S01_A1676 SM00895 Vp2S01_A1676 Vp2S01_A1688 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1690 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1692 SM00344 helix_turn_helix ASNC type Vp2S01_A1697 SM00360 RNA recognition motif Vp2S01_A1702 SM00342 helix_turn_helix, arabinose operon control protein Vp2S01_A1704 SM00421 helix_turn_helix, Lux Regulon Vp2S01_A1706 SM00387 Histidine kinase-like ATPases Vp2S01_A1707 SM00448 cheY-homologous receiver domain Vp2S01_A1710 SM00052 Putative diguanylate phosphodiesterase Vp2S01_A1710 SM00267 diguanylate cyclase Vp2S01_A1711 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1727 SM00470 ParB-like nuclease domain Vp2S01_A1732 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1733 SM00382 ATPases associated with a variety of cellular activities Vp2S01_A1737 SM00387 Histidine kinase-like ATPases Vp2S01_A1737 SM00388 His Kinase A (phosphoacceptor) domain Vp2S01_A1737 SM00448 cheY-homologous receiver domain Vp2S01_A1744 SM00382 ATPases associated with a variety of cellular activities Vp2S01_p10041 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vp2S01_p10041 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vp2S01_p10041 SM00493 Vp2S01_p10041 Vp2S01_p20034 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_p20041 SM00530 Helix-turn-helix XRE-family like proteins Vp2S01_p20050 SM00530 Helix-turn-helix XRE-family like proteins