AL464_00020	SM00047	Lysozyme subfamily 2
AL464_00065	SM00138	Methyltransferase, chemotaxis proteins 
AL464_00070	SM00260	Two component signalling adaptor domain
AL464_00070	SM00448	cheY-homologous receiver domain
AL464_00075	SM00858	AL464_00075
AL464_00150	SM01081	Putative carbohydrate binding domain
AL464_00165	SM00463	Small MutS-related domain
AL464_00170	SM00363	S4 RNA-binding domain
AL464_00205	SM00937	AL464_00205
AL464_00225	SM01400	AL464_00225
AL464_00355	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_00370	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_00370	SM01091	Transporter associated domain
AL464_00425	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_00440	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_00455	SM00862	Transcriptional regulatory protein, C terminal
AL464_00465	SM00642	Alpha-amylase domain
AL464_00475	SM00354	helix_turn _helix lactose operon repressor
AL464_00485	SM00382	ATPases associated with a variety of cellular activities
AL464_00485	SM00930	AL464_00485
AL464_00515	SM00028	Tetratricopeptide repeats
AL464_00520	SM00267	diguanylate cyclase
AL464_00530	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL464_00530	SM00475	5'-3' exonuclease
AL464_00535	SM00477	DNA/RNA non-specific endonuclease
AL464_00535	SM00892	DNA/RNA non-specific endonuclease
AL464_00560	SM00981	AL464_00560
AL464_00585	SM00861	Transketolase, pyrimidine binding domain
AL464_00635	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL464_00685	SM01211	AL464_00685
AL464_00690	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_00730	SM00271	DnaJ molecular chaperone homology domain
AL464_00905	SM00495	Chitin-binding domain type 3
AL464_00920	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_00920	SM01240	AL464_00920
AL464_00940	SM00382	ATPases associated with a variety of cellular activities
AL464_00945	SM00564	beta-propeller repeat
AL464_00965	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_00975	SM00562	AL464_00975
AL464_01000	SM00271	DnaJ molecular chaperone homology domain
AL464_01045	SM01323	AL464_01045
AL464_01060	SM00020	Trypsin-like serine protease
AL464_01065	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_01105	SM00382	ATPases associated with a variety of cellular activities
AL464_01135	SM00091	PAS domain
AL464_01135	SM00387	Histidine kinase-like ATPases
AL464_01135	SM00388	His Kinase A (phosphoacceptor) domain
AL464_01140	SM00448	cheY-homologous receiver domain
AL464_01140	SM00862	Transcriptional regulatory protein, C terminal
AL464_01210	SM00382	ATPases associated with a variety of cellular activities
AL464_01210	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_01220	SM00363	S4 RNA-binding domain
AL464_01230	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_01240	SM00830	Chorismate mutase type II
AL464_01260	SM00382	ATPases associated with a variety of cellular activities
AL464_01280	SM00830	Chorismate mutase type II
AL464_01325	SM00448	cheY-homologous receiver domain
AL464_01325	SM00850	LytTr DNA-binding domain
AL464_01350	SM00904	Riboflavin kinase
AL464_01365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_01380	SM01154	AL464_01380
AL464_01400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_01410	SM00927	DNA mismatch repair enzyme MutH
AL464_01430	SM00382	ATPases associated with a variety of cellular activities
AL464_01475	SM00487	DEAD-like helicases superfamily
AL464_01475	SM00490	helicase superfamily c-terminal domain
AL464_01500	SM00986	Uracil DNA glycosylase superfamily
AL464_01500	SM00987	UreE urease accessory protein, C-terminal domain 
AL464_01505	SM00518	AP endonuclease family 2
AL464_01545	SM00448	cheY-homologous receiver domain
AL464_01545	SM00862	Transcriptional regulatory protein, C terminal
AL464_01555	SM00073	Histidine Phosphotransfer domain
AL464_01555	SM00091	PAS domain
AL464_01555	SM00387	Histidine kinase-like ATPases
AL464_01555	SM00388	His Kinase A (phosphoacceptor) domain
AL464_01555	SM00448	cheY-homologous receiver domain
AL464_01560	SM00091	PAS domain
AL464_01560	SM00267	diguanylate cyclase
AL464_01565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_01635	SM00851	MGS-like domain
AL464_01635	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL464_01640	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL464_01655	SM00957	SecA DEAD-like domain
AL464_01655	SM00958	SecA preprotein cross-linking domain
AL464_01670	SM00864	Tubulin/FtsZ family, GTPase domain
AL464_01670	SM00865	Tubulin/FtsZ family, C-terminal domain
AL464_01675	SM00842	Cell division protein FtsA
AL464_01760	SM00749	bacterial OsmY and nodulation domain
AL464_01810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_01815	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_01820	SM00434	DNA Topoisomerase IV
AL464_01825	SM00387	Histidine kinase-like ATPases
AL464_01825	SM00433	TopoisomeraseII
AL464_01865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_01875	SM00880	AL464_01875
AL464_01875	SM01118	AL464_01875
AL464_01890	SM00287	Bacterial SH3 domain homologues
AL464_01900	SM00382	ATPases associated with a variety of cellular activities
AL464_01920	SM00905	Dihydroneopterin aldolase
AL464_01925	SM01207	AL464_01925
AL464_01950	SM00400	zinc finger
AL464_01950	SM00493	AL464_01950
AL464_01950	SM00766	DNA primase DnaG DnaB-binding
AL464_01990	SM00563	Phosphate acyltransferases
AL464_02015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_02015	SM00387	Histidine kinase-like ATPases
AL464_02015	SM00388	His Kinase A (phosphoacceptor) domain
AL464_02020	SM00448	cheY-homologous receiver domain
AL464_02020	SM00862	Transcriptional regulatory protein, C terminal
AL464_02035	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL464_02035	SM01134	AL464_02035
AL464_02045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_02050	SM00267	diguanylate cyclase
AL464_02095	SM00917	LeuA allosteric (dimerisation) domain
AL464_02100	SM01329	AL464_02100
AL464_02120	SM00271	DnaJ molecular chaperone homology domain
AL464_02140	SM00650	Ribosomal RNA adenine dimethylases
AL464_02220	SM00382	ATPases associated with a variety of cellular activities
AL464_02300	SM00382	ATPases associated with a variety of cellular activities
AL464_02355	SM00487	DEAD-like helicases superfamily
AL464_02355	SM00490	helicase superfamily c-terminal domain
AL464_02385	SM00662	RNA polymerases D
AL464_02390	SM00363	S4 RNA-binding domain
AL464_02390	SM01390	AL464_02390
AL464_02455	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL464_02460	SM01374	AL464_02460
AL464_02480	SM00322	K homology RNA-binding domain
AL464_02495	SM01382	AL464_02495
AL464_02495	SM01383	AL464_02495
AL464_02515	SM01403	AL464_02515
AL464_02525	SM00487	DEAD-like helicases superfamily
AL464_02525	SM00490	helicase superfamily c-terminal domain
AL464_02530	SM00354	helix_turn _helix lactose operon repressor
AL464_02545	SM00382	ATPases associated with a variety of cellular activities
AL464_02545	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_02595	SM00849	Metallo-beta-lactamase superfamily
AL464_02595	SM01027	Beta-Casp domain
AL464_02600	SM00984	UDP binding domain
AL464_02680	SM00858	AL464_02680
AL464_02830	SM00672	Putative lipopolysaccharide-modifying enzyme.
AL464_02840	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL464_02840	SM01232	AL464_02840
AL464_02865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_02865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_02865	SM01049	AL464_02865
AL464_02955	SM00267	diguanylate cyclase
AL464_02965	SM00382	ATPases associated with a variety of cellular activities
AL464_02970	SM00382	ATPases associated with a variety of cellular activities
AL464_03020	SM00028	Tetratricopeptide repeats
AL464_03025	SM00072	Guanylate kinase homologues.
AL464_03030	SM01409	AL464_03030
AL464_03035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_03035	SM00954	Region found in RelA / SpoT proteins
AL464_03045	SM00487	DEAD-like helicases superfamily
AL464_03045	SM00490	helicase superfamily c-terminal domain
AL464_03060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_03060	SM00387	Histidine kinase-like ATPases
AL464_03060	SM00388	His Kinase A (phosphoacceptor) domain
AL464_03065	SM00448	cheY-homologous receiver domain
AL464_03065	SM00862	Transcriptional regulatory protein, C terminal
AL464_03085	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_03085	SM00732	Likely ribonuclease with RNase H fold.
AL464_03165	SM00382	ATPases associated with a variety of cellular activities
AL464_03180	SM00363	S4 RNA-binding domain
AL464_03230	SM01230	AL464_03230
AL464_03240	SM00091	PAS domain
AL464_03240	SM00387	Histidine kinase-like ATPases
AL464_03240	SM00388	His Kinase A (phosphoacceptor) domain
AL464_03245	SM00382	ATPases associated with a variety of cellular activities
AL464_03245	SM00448	cheY-homologous receiver domain
AL464_03250	SM00052	Putative diguanylate phosphodiesterase
AL464_03250	SM00267	diguanylate cyclase
AL464_03250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_03260	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_03295	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL464_03295	SM00474	3'-5' exonuclease
AL464_03295	SM00475	5'-3' exonuclease
AL464_03295	SM00482	DNA polymerase A domain
AL464_03305	SM01004	Delta-aminolevulinic acid dehydratase
AL464_03355	SM00052	Putative diguanylate phosphodiesterase
AL464_03355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_03355	SM00091	PAS domain
AL464_03355	SM00267	diguanylate cyclase
AL464_03390	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL464_03390	SM00195	Dual specificity phosphatase, catalytic domain
AL464_03390	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AL464_03405	SM00749	bacterial OsmY and nodulation domain
AL464_03410	SM00382	ATPases associated with a variety of cellular activities
AL464_03450	SM00052	Putative diguanylate phosphodiesterase
AL464_03450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_03450	SM00091	PAS domain
AL464_03450	SM00267	diguanylate cyclase
AL464_03455	SM00344	helix_turn_helix ASNC type
AL464_03520	SM00354	helix_turn _helix lactose operon repressor
AL464_03525	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_03570	SM00382	ATPases associated with a variety of cellular activities
AL464_03700	SM00829	Enoylreductase
AL464_03740	SM00642	Alpha-amylase domain
AL464_03760	SM00387	Histidine kinase-like ATPases
AL464_03760	SM00433	TopoisomeraseII
AL464_03770	SM00480	DNA polymerase III beta subunit
AL464_03775	SM00382	ATPases associated with a variety of cellular activities
AL464_03775	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL464_03780	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_03780	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_03790	SM00382	ATPases associated with a variety of cellular activities
AL464_03820	SM01228	AL464_03820
AL464_03835	SM00470	ParB-like nuclease domain
AL464_03875	SM00382	ATPases associated with a variety of cellular activities
AL464_03895	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_03935	SM00382	ATPases associated with a variety of cellular activities
AL464_03945	SM00563	Phosphate acyltransferases
AL464_04010	SM00257	Lysin motif
AL464_04035	SM01001	AIR carboxylase
AL464_04140	SM00876	Biotin and Thiamin Synthesis associated domain
AL464_04200	SM00342	helix_turn_helix, arabinose operon control protein
AL464_04210	SM00341	Helicase and RNase D C-terminal
AL464_04210	SM00487	DEAD-like helicases superfamily
AL464_04210	SM00490	helicase superfamily c-terminal domain
AL464_04210	SM00956	AL464_04210
AL464_04230	SM00487	DEAD-like helicases superfamily
AL464_04230	SM00490	helicase superfamily c-terminal domain
AL464_04240	SM00357	Cold shock protein domain
AL464_04240	SM00382	ATPases associated with a variety of cellular activities
AL464_04240	SM00959	Rho termination factor, N-terminal domain
AL464_04325	SM00028	Tetratricopeptide repeats
AL464_04350	SM01219	AL464_04350
AL464_04385	SM00052	Putative diguanylate phosphodiesterase
AL464_04385	SM00897	FIST N domain
AL464_04385	SM01204	AL464_04385
AL464_04390	SM01144	AL464_04390
AL464_04420	SM00052	Putative diguanylate phosphodiesterase
AL464_04425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_04430	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_04495	SM00382	ATPases associated with a variety of cellular activities
AL464_04495	SM00962	SRP54-type protein, GTPase domain
AL464_04495	SM00963	SRP54-type protein, helical bundle domain
AL464_04500	SM00382	ATPases associated with a variety of cellular activities
AL464_04515	SM00450	Rhodanese Homology Domain
AL464_04540	SM00563	Phosphate acyltransferases
AL464_04595	SM00360	RNA recognition motif
AL464_04620	SM00155	Phospholipase D. Active site motifs.
AL464_04675	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL464_04675	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL464_04680	SM00649	Ribosomal protein L11/L12
AL464_04705	SM00663	RNA polymerase I subunit A N-terminus
AL464_04735	SM00986	Uracil DNA glycosylase superfamily
AL464_04735	SM00987	UreE urease accessory protein, C-terminal domain 
AL464_04755	SM00411	bacterial (prokaryotic) histone like domain
AL464_04765	SM01209	AL464_04765
AL464_04765	SM01210	AL464_04765
AL464_04770	SM00798	AICARFT/IMPCHase bienzyme
AL464_04770	SM00851	MGS-like domain
AL464_04775	SM00422	helix_turn_helix, mercury resistance
AL464_04780	SM00862	Transcriptional regulatory protein, C terminal
AL464_04950	SM01018	B12 binding domain
AL464_04985	SM00421	helix_turn_helix, Lux Regulon
AL464_04995	SM00052	Putative diguanylate phosphodiesterase
AL464_04995	SM00267	diguanylate cyclase
AL464_05015	SM00965	Secretin and TonB N terminus short domain
AL464_05025	SM00028	Tetratricopeptide repeats
AL464_05030	SM00382	ATPases associated with a variety of cellular activities
AL464_05100	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_05120	SM00670	Large family of predicted nucleotide-binding domains
AL464_05125	SM00487	DEAD-like helicases superfamily
AL464_05125	SM00490	helicase superfamily c-terminal domain
AL464_05155	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_05155	SM00924	MgtE intracellular N domain
AL464_05185	SM00382	ATPases associated with a variety of cellular activities
AL464_05200	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_05210	SM00382	ATPases associated with a variety of cellular activities
AL464_05245	SM00563	Phosphate acyltransferases
AL464_05410	SM00487	DEAD-like helicases superfamily
AL464_05425	SM00495	Chitin-binding domain type 3
AL464_05455	SM00354	helix_turn _helix lactose operon repressor
AL464_05460	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_05495	SM00267	diguanylate cyclase
AL464_05500	SM00382	ATPases associated with a variety of cellular activities
AL464_05525	SM00878	Biotin carboxylase C-terminal domain
AL464_05545	SM00479	AL464_05545
AL464_05560	SM00387	Histidine kinase-like ATPases
AL464_05560	SM00388	His Kinase A (phosphoacceptor) domain
AL464_05560	SM00448	cheY-homologous receiver domain
AL464_05590	SM01091	Transporter associated domain
AL464_05595	SM00421	helix_turn_helix, Lux Regulon
AL464_05595	SM00448	cheY-homologous receiver domain
AL464_05630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_05630	SM00387	Histidine kinase-like ATPases
AL464_05630	SM00388	His Kinase A (phosphoacceptor) domain
AL464_05635	SM00448	cheY-homologous receiver domain
AL464_05635	SM00862	Transcriptional regulatory protein, C terminal
AL464_05660	SM00883	Chaperonin 10 Kd subunit
AL464_05680	SM01005	Alanine racemase, C-terminal domain
AL464_05690	SM00841	Elongation factor P, C-terminal
AL464_05690	SM01185	AL464_05690
AL464_05745	SM00971	Serine acetyltransferase, N-terminal
AL464_05760	SM00450	Rhodanese Homology Domain
AL464_05775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_05775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_05795	SM00479	AL464_05795
AL464_05875	SM00257	Lysin motif
AL464_05875	SM00646	AL464_05875
AL464_05880	SM00853	MutL C terminal dimerisation domain
AL464_05880	SM01340	AL464_05880
AL464_05900	SM00244	prohibitin homologues
AL464_05905	SM00244	prohibitin homologues
AL464_05915	SM00788	Adenylosuccinate synthetase
AL464_05920	SM00671	Sel1-like repeats.
AL464_05935	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_05935	SM00357	Cold shock protein domain
AL464_05935	SM00955	AL464_05935
AL464_05940	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL464_05985	SM01150	AL464_05985
AL464_05990	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_05990	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_06015	SM00382	ATPases associated with a variety of cellular activities
AL464_06050	SM00320	WD40 repeats
AL464_06090	SM00838	Elongation factor G C-terminus
AL464_06090	SM00889	Elongation factor G, domain IV
AL464_06110	SM00919	Malic enzyme, NAD binding domain
AL464_06110	SM01274	AL464_06110
AL464_06150	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_06210	SM00965	Secretin and TonB N terminus short domain
AL464_06270	SM01005	Alanine racemase, C-terminal domain
AL464_06405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_06405	SM01049	AL464_06405
AL464_06455	SM00478	endonuclease III
AL464_06455	SM00525	AL464_06455
AL464_06475	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_06490	SM01152	AL464_06490
AL464_06520	SM00732	Likely ribonuclease with RNase H fold.
AL464_06545	SM00731	SprT homologues.
AL464_06565	SM00861	Transketolase, pyrimidine binding domain
AL464_06580	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_06705	SM00838	Elongation factor G C-terminus
AL464_06715	SM00358	Double-stranded RNA binding motif
AL464_06715	SM00535	Ribonuclease III family
AL464_06740	SM00073	Histidine Phosphotransfer domain
AL464_06740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_06740	SM00387	Histidine kinase-like ATPases
AL464_06740	SM00388	His Kinase A (phosphoacceptor) domain
AL464_06740	SM00448	cheY-homologous receiver domain
AL464_06750	SM00954	Region found in RelA / SpoT proteins
AL464_06765	SM01192	AL464_06765
AL464_06765	SM01193	AL464_06765
AL464_06800	SM00257	Lysin motif
AL464_06810	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL464_06810	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL464_06820	SM00382	ATPases associated with a variety of cellular activities
AL464_06830	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_06900	SM00829	Enoylreductase
AL464_06930	SM01091	Transporter associated domain
AL464_06940	SM00382	ATPases associated with a variety of cellular activities
AL464_06940	SM00962	SRP54-type protein, GTPase domain
AL464_06940	SM00963	SRP54-type protein, helical bundle domain
AL464_07005	SM00644	AL464_07005
AL464_07010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_07010	SM00895	AL464_07010
AL464_07040	SM00947	Carbonic anhydrase
AL464_07050	SM00382	ATPases associated with a variety of cellular activities
AL464_07100	SM00487	DEAD-like helicases superfamily
AL464_07100	SM00490	helicase superfamily c-terminal domain
AL464_07100	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_07125	SM00938	Nitrogen regulatory protein P-II
AL464_07145	SM00382	ATPases associated with a variety of cellular activities
AL464_07155	SM01068	Putative carbohydrate binding domain
AL464_07175	SM00382	ATPases associated with a variety of cellular activities
AL464_07180	SM00382	ATPases associated with a variety of cellular activities
AL464_07200	SM00091	PAS domain
AL464_07200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_07200	SM00387	Histidine kinase-like ATPases
AL464_07200	SM00388	His Kinase A (phosphoacceptor) domain
AL464_07200	SM00448	cheY-homologous receiver domain
AL464_07265	SM01103	AL464_07265
AL464_07275	SM00382	ATPases associated with a variety of cellular activities
AL464_07315	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_07335	SM01387	AL464_07335
AL464_07340	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_07340	SM00322	K homology RNA-binding domain
AL464_07345	SM00028	Tetratricopeptide repeats
AL464_07350	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_07370	SM00052	Putative diguanylate phosphodiesterase
AL464_07370	SM00091	PAS domain
AL464_07370	SM00267	diguanylate cyclase
AL464_07420	SM01133	AL464_07420
AL464_07425	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AL464_07455	SM00382	ATPases associated with a variety of cellular activities
AL464_07460	SM00838	Elongation factor G C-terminus
AL464_07460	SM00889	Elongation factor G, domain IV
AL464_07480	SM00342	helix_turn_helix, arabinose operon control protein
AL464_07495	SM00382	ATPases associated with a variety of cellular activities
AL464_07500	SM00858	AL464_07500
AL464_07550	SM00028	Tetratricopeptide repeats
AL464_07580	SM01038	Beta galactosidase small chain
AL464_07585	SM00354	helix_turn _helix lactose operon repressor
AL464_07615	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_07620	SM00479	AL464_07620
AL464_07625	SM00354	helix_turn _helix lactose operon repressor
AL464_07735	SM00925	MltA specific insert domain
AL464_07750	SM00267	diguanylate cyclase
AL464_07775	SM00464	Found in ATP-dependent protease La (LON)
AL464_07830	SM00900	AL464_07830
AL464_07870	SM00487	DEAD-like helicases superfamily
AL464_07870	SM00490	helicase superfamily c-terminal domain
AL464_07885	SM00495	Chitin-binding domain type 3
AL464_07885	SM00636	AL464_07885
AL464_07965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_08010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_08020	SM00935	Outer membrane protein (OmpH-like)
AL464_08050	SM00481	DNA polymerase alpha chain like domain
AL464_08060	SM00977	TilS substrate C-terminal domain
AL464_08070	SM00938	Nitrogen regulatory protein P-II
AL464_08085	SM00257	Lysin motif
AL464_08090	SM00849	Metallo-beta-lactamase superfamily
AL464_08105	SM00479	AL464_08105
AL464_08200	SM01130	AL464_08200
AL464_08290	SM00382	ATPases associated with a variety of cellular activities
AL464_08295	SM00387	Histidine kinase-like ATPases
AL464_08295	SM00388	His Kinase A (phosphoacceptor) domain
AL464_08300	SM00382	ATPases associated with a variety of cellular activities
AL464_08300	SM00448	cheY-homologous receiver domain
AL464_08325	SM00382	ATPases associated with a variety of cellular activities
AL464_08385	SM00382	ATPases associated with a variety of cellular activities
AL464_08385	SM00962	SRP54-type protein, GTPase domain
AL464_08400	SM00448	cheY-homologous receiver domain
AL464_08410	SM00073	Histidine Phosphotransfer domain
AL464_08410	SM00260	Two component signalling adaptor domain
AL464_08410	SM00387	Histidine kinase-like ATPases
AL464_08410	SM01231	AL464_08410
AL464_08415	SM00448	cheY-homologous receiver domain
AL464_08425	SM00260	Two component signalling adaptor domain
AL464_08430	SM00260	Two component signalling adaptor domain
AL464_08440	SM00382	ATPases associated with a variety of cellular activities
AL464_08535	SM00855	Phosphoglycerate mutase family
AL464_08540	SM00463	Small MutS-related domain
AL464_08580	SM00825	Beta-ketoacyl synthase
AL464_08590	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_08640	SM00448	cheY-homologous receiver domain
AL464_08655	SM00382	ATPases associated with a variety of cellular activities
AL464_08665	SM00493	AL464_08665
AL464_08730	SM00098	Alkaline phosphatase homologues
AL464_08750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_08760	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_08780	SM00870	AL464_08780
AL464_08800	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL464_08800	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL464_08800	SM00493	AL464_08800
AL464_08855	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_08905	SM00479	AL464_08905
AL464_08925	SM00478	endonuclease III
AL464_08925	SM00525	AL464_08925
AL464_08935	SM00900	AL464_08935
AL464_08965	SM00487	DEAD-like helicases superfamily
AL464_08965	SM00490	helicase superfamily c-terminal domain
AL464_08970	SM00382	ATPases associated with a variety of cellular activities
AL464_08970	SM00448	cheY-homologous receiver domain
AL464_08985	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_08990	SM00852	Probable molybdopterin binding domain
AL464_09025	SM00382	ATPases associated with a variety of cellular activities
AL464_09030	SM00382	ATPases associated with a variety of cellular activities
AL464_09075	SM00382	ATPases associated with a variety of cellular activities
AL464_09080	SM00642	Alpha-amylase domain
AL464_09085	SM00267	diguanylate cyclase
AL464_09110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_09145	SM00226	Low molecular weight phosphatase family
AL464_09155	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_09160	SM00363	S4 RNA-binding domain
AL464_09190	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL464_09195	SM00822	AL464_09195
AL464_09205	SM00825	Beta-ketoacyl synthase
AL464_09270	SM00260	Two component signalling adaptor domain
AL464_09270	SM00448	cheY-homologous receiver domain
AL464_09275	SM00481	DNA polymerase alpha chain like domain
AL464_09290	SM00822	AL464_09290
AL464_09305	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_09310	SM00411	bacterial (prokaryotic) histone like domain
AL464_09320	SM00028	Tetratricopeptide repeats
AL464_09325	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL464_09385	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_09400	SM00387	Histidine kinase-like ATPases
AL464_09400	SM00388	His Kinase A (phosphoacceptor) domain
AL464_09405	SM00421	helix_turn_helix, Lux Regulon
AL464_09405	SM00448	cheY-homologous receiver domain
AL464_09475	SM00382	ATPases associated with a variety of cellular activities
AL464_09485	SM00342	helix_turn_helix, arabinose operon control protein
AL464_09525	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_09525	SM00364	Leucine-rich repeats, bacterial type
AL464_09525	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AL464_09530	SM00387	Histidine kinase-like ATPases
AL464_09530	SM00388	His Kinase A (phosphoacceptor) domain
AL464_09535	SM00448	cheY-homologous receiver domain
AL464_09535	SM00862	Transcriptional regulatory protein, C terminal
AL464_09540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_09540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_09545	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_09550	SM00052	Putative diguanylate phosphodiesterase
AL464_09550	SM00091	PAS domain
AL464_09600	SM00387	Histidine kinase-like ATPases
AL464_09600	SM00388	His Kinase A (phosphoacceptor) domain
AL464_09600	SM00448	cheY-homologous receiver domain
AL464_09620	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_09620	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_09660	SM00481	DNA polymerase alpha chain like domain
AL464_09675	SM00363	S4 RNA-binding domain
AL464_09685	SM00841	Elongation factor P, C-terminal
AL464_09685	SM01185	AL464_09685
AL464_09695	SM00486	DNA polymerase type-B family
AL464_09700	SM00421	helix_turn_helix, Lux Regulon
AL464_09700	SM00448	cheY-homologous receiver domain
AL464_09705	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_09705	SM00465	GIY-YIG type nucleases (URI domain)
AL464_09760	SM00852	Probable molybdopterin binding domain
AL464_09785	SM00434	DNA Topoisomerase IV
AL464_09875	SM00849	Metallo-beta-lactamase superfamily
AL464_09905	SM00387	Histidine kinase-like ATPases
AL464_09905	SM01049	AL464_09905
AL464_09910	SM00421	helix_turn_helix, Lux Regulon
AL464_09910	SM00448	cheY-homologous receiver domain
AL464_09915	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_09925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_09925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_09930	SM00479	AL464_09930
AL464_09935	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_09935	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_09960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_09975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_09975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_09990	SM00052	Putative diguanylate phosphodiesterase
AL464_10015	SM00387	Histidine kinase-like ATPases
AL464_10015	SM00388	His Kinase A (phosphoacceptor) domain
AL464_10015	SM00448	cheY-homologous receiver domain
AL464_10045	SM00091	PAS domain
AL464_10045	SM00382	ATPases associated with a variety of cellular activities
AL464_10215	SM00357	Cold shock protein domain
AL464_10530	SM01252	AL464_10530
AL464_10635	SM00871	Bacterial transcription activator, effector binding domain
AL464_10775	SM01230	AL464_10775
AL464_10785	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_10820	SM01131	AL464_10820
AL464_10825	SM00052	Putative diguanylate phosphodiesterase
AL464_10835	SM00635	Bacterial Ig-like domain 2
AL464_10840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_10845	SM00342	helix_turn_helix, arabinose operon control protein
AL464_10855	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_10870	SM01118	AL464_10870
AL464_10880	SM01266	AL464_10880
AL464_10895	SM00387	Histidine kinase-like ATPases
AL464_10895	SM00388	His Kinase A (phosphoacceptor) domain
AL464_10895	SM00448	cheY-homologous receiver domain
AL464_10900	SM00052	Putative diguanylate phosphodiesterase
AL464_10900	SM00267	diguanylate cyclase
AL464_10900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_10910	SM00028	Tetratricopeptide repeats
AL464_10975	SM00387	Histidine kinase-like ATPases
AL464_10975	SM00388	His Kinase A (phosphoacceptor) domain
AL464_10980	SM00448	cheY-homologous receiver domain
AL464_10980	SM00862	Transcriptional regulatory protein, C terminal
AL464_10990	SM00822	AL464_10990
AL464_10995	SM01236	AL464_10995
AL464_11020	SM00382	ATPases associated with a variety of cellular activities
AL464_11025	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_11025	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_11030	SM00479	AL464_11030
AL464_11090	SM00091	PAS domain
AL464_11090	SM00387	Histidine kinase-like ATPases
AL464_11095	SM00448	cheY-homologous receiver domain
AL464_11110	SM01350	AL464_11110
AL464_11120	SM00382	ATPases associated with a variety of cellular activities
AL464_11145	SM00342	helix_turn_helix, arabinose operon control protein
AL464_11310	SM00382	ATPases associated with a variety of cellular activities
AL464_11405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_11405	SM00895	AL464_11405
AL464_11440	SM00020	Trypsin-like serine protease
AL464_11440	SM00495	Chitin-binding domain type 3
AL464_11465	SM00028	Tetratricopeptide repeats
AL464_11465	SM00267	diguanylate cyclase
AL464_11485	SM00327	von Willebrand factor (vWF) type A domain
AL464_11505	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL464_11510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_11535	SM00382	ATPases associated with a variety of cellular activities
AL464_11550	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_11580	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_11600	SM00382	ATPases associated with a variety of cellular activities
AL464_11610	SM00945	ProQ/FINO family
AL464_11615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_11615	SM00245	tail specific protease
AL464_11645	SM00981	AL464_11645
AL464_11655	SM00382	ATPases associated with a variety of cellular activities
AL464_11720	SM00387	Histidine kinase-like ATPases
AL464_11720	SM00388	His Kinase A (phosphoacceptor) domain
AL464_11720	SM00448	cheY-homologous receiver domain
AL464_11725	SM00897	FIST N domain
AL464_11725	SM01204	AL464_11725
AL464_11775	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_11775	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_11805	SM00382	ATPases associated with a variety of cellular activities
AL464_11870	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_11905	SM00382	ATPases associated with a variety of cellular activities
AL464_11910	SM00387	Histidine kinase-like ATPases
AL464_11910	SM00388	His Kinase A (phosphoacceptor) domain
AL464_11915	SM00382	ATPases associated with a variety of cellular activities
AL464_11915	SM00448	cheY-homologous receiver domain
AL464_11930	SM00382	ATPases associated with a variety of cellular activities
AL464_11940	SM00852	Probable molybdopterin binding domain
AL464_11955	SM01144	AL464_11955
AL464_11990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_12005	SM00267	diguanylate cyclase
AL464_12010	SM00448	cheY-homologous receiver domain
AL464_12070	SM00382	ATPases associated with a variety of cellular activities
AL464_12070	SM00448	cheY-homologous receiver domain
AL464_12145	SM00382	ATPases associated with a variety of cellular activities
AL464_12145	SM00487	DEAD-like helicases superfamily
AL464_12145	SM00490	helicase superfamily c-terminal domain
AL464_12145	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_12175	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_12200	SM00479	AL464_12200
AL464_12205	SM00267	diguanylate cyclase
AL464_12205	SM01079	AL464_12205
AL464_12245	SM00382	ATPases associated with a variety of cellular activities
AL464_12250	SM00382	ATPases associated with a variety of cellular activities
AL464_12280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_12285	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AL464_12350	SM00240	Forkhead associated domain
AL464_12370	SM00344	helix_turn_helix ASNC type
AL464_12405	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_12440	SM00382	ATPases associated with a variety of cellular activities
AL464_12440	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_12445	SM00382	ATPases associated with a variety of cellular activities
AL464_12500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_12505	SM00052	Putative diguanylate phosphodiesterase
AL464_12505	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_12505	SM00091	PAS domain
AL464_12505	SM00267	diguanylate cyclase
AL464_12510	SM00448	cheY-homologous receiver domain
AL464_12515	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_12515	SM00387	Histidine kinase-like ATPases
AL464_12535	SM00855	Phosphoglycerate mutase family
AL464_12665	SM00382	ATPases associated with a variety of cellular activities
AL464_12670	SM00382	ATPases associated with a variety of cellular activities
AL464_12685	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_12705	SM00382	ATPases associated with a variety of cellular activities
AL464_12710	SM01130	AL464_12710
AL464_12750	SM00245	tail specific protease
AL464_12820	SM00382	ATPases associated with a variety of cellular activities
AL464_12840	SM00855	Phosphoglycerate mutase family
AL464_12870	SM00479	AL464_12870
AL464_12905	SM00411	bacterial (prokaryotic) histone like domain
AL464_12915	SM00873	B3/4 domain
AL464_12915	SM00874	tRNA synthetase B5 domain
AL464_12915	SM00896	Ferredoxin-fold anticodon binding domain
AL464_12925	SM00267	diguanylate cyclase
AL464_12950	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_12975	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_12990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_12990	SM00866	AL464_12990
AL464_13080	SM00487	DEAD-like helicases superfamily
AL464_13080	SM00490	helicase superfamily c-terminal domain
AL464_13080	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_13085	SM00919	Malic enzyme, NAD binding domain
AL464_13085	SM01274	AL464_13085
AL464_13100	SM00267	diguanylate cyclase
AL464_13125	SM00382	ATPases associated with a variety of cellular activities
AL464_13130	SM00382	ATPases associated with a variety of cellular activities
AL464_13150	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_13150	SM00387	Histidine kinase-like ATPases
AL464_13155	SM00448	cheY-homologous receiver domain
AL464_13245	SM00382	ATPases associated with a variety of cellular activities
AL464_13295	SM00363	S4 RNA-binding domain
AL464_13300	SM00487	DEAD-like helicases superfamily
AL464_13300	SM00490	helicase superfamily c-terminal domain
AL464_13310	SM00448	cheY-homologous receiver domain
AL464_13310	SM00862	Transcriptional regulatory protein, C terminal
AL464_13315	SM00387	Histidine kinase-like ATPases
AL464_13355	SM00421	helix_turn_helix, Lux Regulon
AL464_13355	SM00448	cheY-homologous receiver domain
AL464_13360	SM00387	Histidine kinase-like ATPases
AL464_13360	SM00388	His Kinase A (phosphoacceptor) domain
AL464_13365	SM00450	Rhodanese Homology Domain
AL464_13395	SM00382	ATPases associated with a variety of cellular activities
AL464_13410	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_13410	SM00382	ATPases associated with a variety of cellular activities
AL464_13435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_13435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_13445	SM00155	Phospholipase D. Active site motifs.
AL464_13500	SM00382	ATPases associated with a variety of cellular activities
AL464_13520	SM00382	ATPases associated with a variety of cellular activities
AL464_13525	SM00382	ATPases associated with a variety of cellular activities
AL464_13535	SM01131	AL464_13535
AL464_13605	SM00840	AL464_13605
AL464_13620	SM00052	Putative diguanylate phosphodiesterase
AL464_13670	SM00382	ATPases associated with a variety of cellular activities
AL464_13685	SM00528	Domain in histone-like proteins of HNS family
AL464_13775	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_13775	SM00876	Biotin and Thiamin Synthesis associated domain
AL464_13805	SM00382	ATPases associated with a variety of cellular activities
AL464_13815	SM00843	AL464_13815
AL464_13820	SM00344	helix_turn_helix ASNC type
AL464_13825	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL464_13825	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL464_13870	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_13885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_13885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_13900	SM00387	Histidine kinase-like ATPases
AL464_13900	SM00388	His Kinase A (phosphoacceptor) domain
AL464_13900	SM00448	cheY-homologous receiver domain
AL464_13935	SM00028	Tetratricopeptide repeats
AL464_13990	SM00382	ATPases associated with a variety of cellular activities
AL464_13995	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_14000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_14070	SM00448	cheY-homologous receiver domain
AL464_14070	SM00862	Transcriptional regulatory protein, C terminal
AL464_14080	SM00354	helix_turn _helix lactose operon repressor
AL464_14115	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL464_14115	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL464_14115	SM00493	AL464_14115
AL464_14145	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_14155	SM00382	ATPases associated with a variety of cellular activities
AL464_14155	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_14165	SM00357	Cold shock protein domain
AL464_14190	SM00491	AL464_14190
AL464_14215	SM01276	AL464_14215
AL464_14230	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_14230	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_14235	SM00382	ATPases associated with a variety of cellular activities
AL464_14275	SM00763	PrkA AAA domain
AL464_14305	SM00382	ATPases associated with a variety of cellular activities
AL464_14310	SM00849	Metallo-beta-lactamase superfamily
AL464_14325	SM00382	ATPases associated with a variety of cellular activities
AL464_14340	SM00487	DEAD-like helicases superfamily
AL464_14340	SM00490	helicase superfamily c-terminal domain
AL464_14340	SM00982	AL464_14340
AL464_14340	SM01058	CarD-like/TRCF domain
AL464_14390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_14390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_14410	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_14435	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_14435	SM00267	diguanylate cyclase
AL464_14465	SM00344	helix_turn_helix ASNC type
AL464_14530	SM00978	AL464_14530
AL464_14540	SM00563	Phosphate acyltransferases
AL464_14560	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL464_14590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_14595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_14600	SM01144	AL464_14600
AL464_14610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_14620	SM00411	bacterial (prokaryotic) histone like domain
AL464_14625	SM00382	ATPases associated with a variety of cellular activities
AL464_14625	SM00464	Found in ATP-dependent protease La (LON)
AL464_14630	SM00382	ATPases associated with a variety of cellular activities
AL464_14630	SM00994	ClpX C4-type zinc finger
AL464_14630	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_14650	SM00387	Histidine kinase-like ATPases
AL464_14650	SM00388	His Kinase A (phosphoacceptor) domain
AL464_14655	SM00382	ATPases associated with a variety of cellular activities
AL464_14655	SM00448	cheY-homologous receiver domain
AL464_14690	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_14705	SM00487	DEAD-like helicases superfamily
AL464_14705	SM00490	helicase superfamily c-terminal domain
AL464_14710	SM01091	Transporter associated domain
AL464_14740	SM00563	Phosphate acyltransferases
AL464_14800	SM00825	Beta-ketoacyl synthase
AL464_14810	SM00822	AL464_14810
AL464_14815	SM00825	Beta-ketoacyl synthase
AL464_14870	SM00474	3'-5' exonuclease
AL464_14900	SM00487	DEAD-like helicases superfamily
AL464_14900	SM00491	AL464_14900
AL464_14915	SM00836	DALR anticodon binding domain
AL464_14915	SM01016	Arginyl tRNA synthetase N terminal dom
AL464_14935	SM00899	AL464_14935
AL464_14940	SM00342	helix_turn_helix, arabinose operon control protein
AL464_14950	SM00382	ATPases associated with a variety of cellular activities
AL464_14960	SM00881	CoA binding domain
AL464_14975	SM00861	Transketolase, pyrimidine binding domain
AL464_15080	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL464_15100	SM00387	Histidine kinase-like ATPases
AL464_15105	SM00862	Transcriptional regulatory protein, C terminal
AL464_15130	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_15135	SM00938	Nitrogen regulatory protein P-II
AL464_15165	SM00244	prohibitin homologues
AL464_15185	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_15185	SM00292	breast cancer carboxy-terminal domain
AL464_15185	SM00532	Ligase N family
AL464_15190	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AL464_15275	SM00862	Transcriptional regulatory protein, C terminal
AL464_15305	SM00382	ATPases associated with a variety of cellular activities
AL464_15335	SM00862	Transcriptional regulatory protein, C terminal
AL464_15360	SM01276	AL464_15360
AL464_15365	SM00528	Domain in histone-like proteins of HNS family
AL464_15380	SM00342	helix_turn_helix, arabinose operon control protein
AL464_15385	SM00382	ATPases associated with a variety of cellular activities
AL464_15390	SM00382	ATPases associated with a variety of cellular activities
AL464_15430	SM00988	UreE urease accessory protein, N-terminal domain
AL464_15460	SM00635	Bacterial Ig-like domain 2
AL464_15490	SM00382	ATPases associated with a variety of cellular activities
AL464_15540	SM00822	AL464_15540
AL464_15555	SM00342	helix_turn_helix, arabinose operon control protein
AL464_15560	SM00917	LeuA allosteric (dimerisation) domain
AL464_15585	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_15595	SM00020	Trypsin-like serine protease
AL464_15615	SM00357	Cold shock protein domain
AL464_15635	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_15675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_15675	SM00387	Histidine kinase-like ATPases
AL464_15675	SM00388	His Kinase A (phosphoacceptor) domain
AL464_15680	SM00448	cheY-homologous receiver domain
AL464_15680	SM00862	Transcriptional regulatory protein, C terminal
AL464_15690	SM01065	Starch binding domain
AL464_15730	SM00563	Phosphate acyltransferases
AL464_15735	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_15740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_15760	SM00924	MgtE intracellular N domain
AL464_15775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_15785	SM00344	helix_turn_helix ASNC type
AL464_15805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_15810	SM00387	Histidine kinase-like ATPases
AL464_15810	SM00388	His Kinase A (phosphoacceptor) domain
AL464_15810	SM00448	cheY-homologous receiver domain
AL464_15840	SM00465	GIY-YIG type nucleases (URI domain)
AL464_15850	SM00387	Histidine kinase-like ATPases
AL464_15850	SM00388	His Kinase A (phosphoacceptor) domain
AL464_15850	SM00448	cheY-homologous receiver domain
AL464_15855	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_15880	SM00344	helix_turn_helix ASNC type
AL464_15925	SM00822	AL464_15925
AL464_15955	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_15965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_15965	SM00387	Histidine kinase-like ATPases
AL464_15970	SM00421	helix_turn_helix, Lux Regulon
AL464_15970	SM00448	cheY-homologous receiver domain
AL464_16005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_16040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_16045	SM00861	Transketolase, pyrimidine binding domain
AL464_16065	SM00636	AL464_16065
AL464_16070	SM00052	Putative diguanylate phosphodiesterase
AL464_16070	SM00267	diguanylate cyclase
AL464_16075	SM00450	Rhodanese Homology Domain
AL464_16100	SM00852	Probable molybdopterin binding domain
AL464_16140	SM00448	cheY-homologous receiver domain
AL464_16145	SM00091	PAS domain
AL464_16155	SM01240	AL464_16155
AL464_16165	SM00893	Electron transfer flavoprotein domain
AL464_16170	SM00893	Electron transfer flavoprotein domain
AL464_16180	SM00382	ATPases associated with a variety of cellular activities
AL464_16205	SM00382	ATPases associated with a variety of cellular activities
AL464_16235	SM00422	helix_turn_helix, mercury resistance
AL464_16260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_16265	SM01266	AL464_16265
AL464_16285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_16285	SM00091	PAS domain
AL464_16285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_16285	SM00387	Histidine kinase-like ATPases
AL464_16285	SM00388	His Kinase A (phosphoacceptor) domain
AL464_16285	SM00448	cheY-homologous receiver domain
AL464_16295	SM00878	Biotin carboxylase C-terminal domain
AL464_16315	SM00422	helix_turn_helix, mercury resistance
AL464_16350	SM00822	AL464_16350
AL464_16355	SM00028	Tetratricopeptide repeats
AL464_16355	SM00267	diguanylate cyclase
AL464_16385	SM00382	ATPases associated with a variety of cellular activities
AL464_16400	SM00244	prohibitin homologues
AL464_16410	SM00052	Putative diguanylate phosphodiesterase
AL464_16410	SM00091	PAS domain
AL464_16410	SM00267	diguanylate cyclase
AL464_16420	SM00387	Histidine kinase-like ATPases
AL464_16420	SM00388	His Kinase A (phosphoacceptor) domain
AL464_16420	SM00448	cheY-homologous receiver domain
AL464_16480	SM00052	Putative diguanylate phosphodiesterase
AL464_16480	SM00267	diguanylate cyclase
AL464_16490	SM00382	ATPases associated with a variety of cellular activities
AL464_16510	SM00354	helix_turn _helix lactose operon repressor
AL464_16545	SM00448	cheY-homologous receiver domain
AL464_16545	SM00862	Transcriptional regulatory protein, C terminal
AL464_16550	SM00388	His Kinase A (phosphoacceptor) domain
AL464_16555	SM00871	Bacterial transcription activator, effector binding domain
AL464_16560	SM00098	Alkaline phosphatase homologues
AL464_16580	SM00028	Tetratricopeptide repeats
AL464_16580	SM00267	diguanylate cyclase
AL464_16595	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_16615	SM01012	AL464_16615
AL464_16630	SM00382	ATPases associated with a variety of cellular activities
AL464_16665	SM00331	Sigma factor PP2C-like phosphatases
AL464_16665	SM00448	cheY-homologous receiver domain
AL464_16685	SM00448	cheY-homologous receiver domain
AL464_16690	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_16700	SM00240	Forkhead associated domain
AL464_16730	SM00331	Sigma factor PP2C-like phosphatases
AL464_16730	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AL464_16775	SM00382	ATPases associated with a variety of cellular activities
AL464_16775	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_16830	SM00342	helix_turn_helix, arabinose operon control protein
AL464_16865	SM00382	ATPases associated with a variety of cellular activities
AL464_16905	SM01005	Alanine racemase, C-terminal domain
AL464_16910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_16910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_16925	SM00642	Alpha-amylase domain
AL464_16940	SM00880	AL464_16940
AL464_17055	SM00342	helix_turn_helix, arabinose operon control protein
AL464_17100	SM00387	Histidine kinase-like ATPases
AL464_17105	SM00421	helix_turn_helix, Lux Regulon
AL464_17105	SM00448	cheY-homologous receiver domain
AL464_17130	SM00450	Rhodanese Homology Domain
AL464_17140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_17185	SM00342	helix_turn_helix, arabinose operon control protein
AL464_17225	SM00382	ATPases associated with a variety of cellular activities
AL464_17235	SM00267	diguanylate cyclase
AL464_17235	SM00448	cheY-homologous receiver domain
AL464_17245	SM00267	diguanylate cyclase
AL464_17260	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL464_17260	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL464_17270	SM00387	Histidine kinase-like ATPases
AL464_17270	SM00388	His Kinase A (phosphoacceptor) domain
AL464_17275	SM00448	cheY-homologous receiver domain
AL464_17275	SM00862	Transcriptional regulatory protein, C terminal
AL464_17330	SM00881	CoA binding domain
AL464_17350	SM00091	PAS domain
AL464_17350	SM00267	diguanylate cyclase
AL464_17350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_17360	SM00796	Allophanate hydrolase subunit 1
AL464_17365	SM00797	Allophanate hydrolase subunit 2
AL464_17380	SM00382	ATPases associated with a variety of cellular activities
AL464_17395	SM00052	Putative diguanylate phosphodiesterase
AL464_17395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_17395	SM00267	diguanylate cyclase
AL464_17405	SM00271	DnaJ molecular chaperone homology domain
AL464_17465	SM00782	PhnA Zinc-Ribbon
AL464_17500	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_17505	SM00867	YceI-like domain 
AL464_17525	SM00052	Putative diguanylate phosphodiesterase
AL464_17530	SM00487	DEAD-like helicases superfamily
AL464_17530	SM00490	helicase superfamily c-terminal domain
AL464_17540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_17550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_17580	SM00495	Chitin-binding domain type 3
AL464_17580	SM00636	AL464_17580
AL464_17585	SM00342	helix_turn_helix, arabinose operon control protein
AL464_17600	SM00448	cheY-homologous receiver domain
AL464_17605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_17605	SM00387	Histidine kinase-like ATPases
AL464_17605	SM00388	His Kinase A (phosphoacceptor) domain
AL464_17625	SM00382	ATPases associated with a variety of cellular activities
AL464_17635	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_17635	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_17645	SM00052	Putative diguanylate phosphodiesterase
AL464_17660	SM00354	helix_turn _helix lactose operon repressor
AL464_17710	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_17900	SM00479	AL464_17900
AL464_17910	SM00382	ATPases associated with a variety of cellular activities
AL464_17940	SM00422	helix_turn_helix, mercury resistance
AL464_17975	SM00924	MgtE intracellular N domain
AL464_18015	SM00953	AL464_18015
AL464_18030	SM00704	CDGSH-type zinc finger. Function unknown.
AL464_18040	SM00448	cheY-homologous receiver domain
AL464_18045	SM00387	Histidine kinase-like ATPases
AL464_18095	SM00014	Acid phosphatase homologues
AL464_18120	SM00260	Two component signalling adaptor domain
AL464_18120	SM00448	cheY-homologous receiver domain
AL464_18130	SM00448	cheY-homologous receiver domain
AL464_18135	SM00421	helix_turn_helix, Lux Regulon
AL464_18135	SM00448	cheY-homologous receiver domain
AL464_18145	SM00267	diguanylate cyclase
AL464_18150	SM00421	helix_turn_helix, Lux Regulon
AL464_18150	SM00448	cheY-homologous receiver domain
AL464_18155	SM00052	Putative diguanylate phosphodiesterase
AL464_18155	SM00448	cheY-homologous receiver domain
AL464_18160	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_18160	SM00387	Histidine kinase-like ATPases
AL464_18160	SM00388	His Kinase A (phosphoacceptor) domain
AL464_18160	SM00448	cheY-homologous receiver domain
AL464_18190	SM00327	von Willebrand factor (vWF) type A domain
AL464_18260	SM00342	helix_turn_helix, arabinose operon control protein
AL464_18275	SM00052	Putative diguanylate phosphodiesterase
AL464_18290	SM00387	Histidine kinase-like ATPases
AL464_18290	SM00448	cheY-homologous receiver domain
AL464_18335	SM00990	AL464_18335
AL464_18340	SM00028	Tetratricopeptide repeats
AL464_18365	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL464_18385	SM00327	von Willebrand factor (vWF) type A domain
AL464_18390	SM00327	von Willebrand factor (vWF) type A domain
AL464_18425	SM00028	Tetratricopeptide repeats
AL464_18440	SM00862	Transcriptional regulatory protein, C terminal
AL464_18455	SM00073	Histidine Phosphotransfer domain
AL464_18455	SM00387	Histidine kinase-like ATPases
AL464_18455	SM00388	His Kinase A (phosphoacceptor) domain
AL464_18455	SM00448	cheY-homologous receiver domain
AL464_18465	SM00851	MGS-like domain
AL464_18510	SM00342	helix_turn_helix, arabinose operon control protein
AL464_18515	SM00422	helix_turn_helix, mercury resistance
AL464_18520	SM00382	ATPases associated with a variety of cellular activities
AL464_18580	SM00861	Transketolase, pyrimidine binding domain
AL464_18620	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_18620	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_18625	SM00382	ATPases associated with a variety of cellular activities
AL464_18665	SM00822	AL464_18665
AL464_18700	SM00422	helix_turn_helix, mercury resistance
AL464_18735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_18735	SM00091	PAS domain
AL464_18735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_18745	SM00052	Putative diguanylate phosphodiesterase
AL464_18745	SM00267	diguanylate cyclase
AL464_18750	SM00487	DEAD-like helicases superfamily
AL464_18750	SM00490	helicase superfamily c-terminal domain
AL464_18755	SM00357	Cold shock protein domain
AL464_18755	SM00955	AL464_18755
AL464_18760	SM00342	helix_turn_helix, arabinose operon control protein
AL464_18805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_18810	SM00382	ATPases associated with a variety of cellular activities
AL464_18815	SM00052	Putative diguanylate phosphodiesterase
AL464_18835	SM00487	DEAD-like helicases superfamily
AL464_18835	SM00490	helicase superfamily c-terminal domain
AL464_18840	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL464_18870	SM00487	DEAD-like helicases superfamily
AL464_18870	SM00490	helicase superfamily c-terminal domain
AL464_18970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_18970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_18980	SM00382	ATPases associated with a variety of cellular activities
AL464_19000	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_19000	SM00267	diguanylate cyclase
AL464_19005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_19005	SM00091	PAS domain
AL464_19005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_19015	SM00357	Cold shock protein domain
AL464_19020	SM01322	AL464_19020
AL464_19165	SM00052	Putative diguanylate phosphodiesterase
AL464_19165	SM00267	diguanylate cyclase
AL464_19195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_19195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_19215	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_19225	SM00481	DNA polymerase alpha chain like domain
AL464_19260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_19270	SM00342	helix_turn_helix, arabinose operon control protein
AL464_19290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_19290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_19300	SM00382	ATPases associated with a variety of cellular activities
AL464_19320	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_19360	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_19360	SM00267	diguanylate cyclase
AL464_19400	SM00382	ATPases associated with a variety of cellular activities
AL464_19430	SM00642	Alpha-amylase domain
AL464_19505	SM00260	Two component signalling adaptor domain
AL464_19505	SM00448	cheY-homologous receiver domain
AL464_19525	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_19555	SM00382	ATPases associated with a variety of cellular activities
AL464_19630	SM00342	helix_turn_helix, arabinose operon control protein
AL464_19650	SM00342	helix_turn_helix, arabinose operon control protein
AL464_19650	SM00871	Bacterial transcription activator, effector binding domain
AL464_19695	SM00487	DEAD-like helicases superfamily
AL464_19695	SM00490	helicase superfamily c-terminal domain
AL464_19725	SM00829	Enoylreductase
AL464_19740	SM00342	helix_turn_helix, arabinose operon control protein
AL464_19770	SM00788	Adenylosuccinate synthetase
AL464_19775	SM00870	AL464_19775
AL464_19795	SM00421	helix_turn_helix, Lux Regulon
AL464_19840	SM00267	diguanylate cyclase
AL464_19845	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_19850	SM00421	helix_turn_helix, Lux Regulon
AL464_19865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_19865	SM00866	AL464_19865
AL464_19890	SM00382	ATPases associated with a variety of cellular activities
AL464_19915	SM00155	Phospholipase D. Active site motifs.
AL464_19925	SM01022	AL464_19925
AL464_19930	SM00028	Tetratricopeptide repeats
AL464_19940	SM00422	helix_turn_helix, mercury resistance
AL464_19960	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL464_19965	SM00838	Elongation factor G C-terminus
AL464_19965	SM00889	Elongation factor G, domain IV
AL464_20055	SM00248	ankyrin repeats
AL464_20060	SM01060	AL464_20060
AL464_20070	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL464_20070	SM01134	AL464_20070
AL464_20175	SM00883	Chaperonin 10 Kd subunit
AL464_20180	SM00450	Rhodanese Homology Domain
AL464_20205	SM01240	AL464_20205
AL464_20280	SM00858	AL464_20280
AL464_20355	SM00631	AL464_20355
AL464_20380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_20380	SM00866	AL464_20380
AL464_20390	SM00382	ATPases associated with a variety of cellular activities
AL464_20420	SM00354	helix_turn _helix lactose operon repressor
AL464_20460	SM00382	ATPases associated with a variety of cellular activities
AL464_20475	SM01057	Eukaryotic-type carbonic anhydrase
AL464_20535	SM01266	AL464_20535
AL464_20590	SM00267	diguanylate cyclase
AL464_20600	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_20605	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_20610	SM00267	diguanylate cyclase
AL464_20610	SM01079	AL464_20610
AL464_20670	SM00267	diguanylate cyclase
AL464_20675	SM00382	ATPases associated with a variety of cellular activities
AL464_20675	SM00448	cheY-homologous receiver domain
AL464_20680	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_20680	SM00387	Histidine kinase-like ATPases
AL464_20700	SM00342	helix_turn_helix, arabinose operon control protein
AL464_20730	SM00849	Metallo-beta-lactamase superfamily
AL464_20770	SM00382	ATPases associated with a variety of cellular activities
AL464_20805	SM00028	Tetratricopeptide repeats
AL464_20840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_20840	SM00387	Histidine kinase-like ATPases
AL464_20840	SM00388	His Kinase A (phosphoacceptor) domain
AL464_20845	SM00448	cheY-homologous receiver domain
AL464_20845	SM00862	Transcriptional regulatory protein, C terminal
AL464_20940	SM00382	ATPases associated with a variety of cellular activities
AL464_20970	SM00014	Acid phosphatase homologues
AL464_20990	SM00822	AL464_20990
AL464_21025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_21095	SM00506	Appr-1"-p processing enzyme
AL464_21150	SM00495	Chitin-binding domain type 3
AL464_21155	SM00344	helix_turn_helix ASNC type
AL464_21230	SM00346	helix_turn_helix isocitrate lyase regulation
AL464_21235	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_21240	SM00479	AL464_21240
AL464_21255	SM00829	Enoylreductase
AL464_21270	SM00267	diguanylate cyclase
AL464_21290	SM00849	Metallo-beta-lactamase superfamily
AL464_21310	SM00267	diguanylate cyclase
AL464_21330	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_21330	SM00495	Chitin-binding domain type 3
AL464_21330	SM00636	AL464_21330
AL464_21375	SM00342	helix_turn_helix, arabinose operon control protein
AL464_21375	SM01009	AlkA N-terminal domain
AL464_21425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_21430	SM00382	ATPases associated with a variety of cellular activities
AL464_21460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_21460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_21460	SM01049	AL464_21460
AL464_21475	SM00448	cheY-homologous receiver domain
AL464_21475	SM00850	LytTr DNA-binding domain
AL464_21480	SM00387	Histidine kinase-like ATPases
AL464_21525	SM00387	Histidine kinase-like ATPases
AL464_21525	SM00388	His Kinase A (phosphoacceptor) domain
AL464_21525	SM00448	cheY-homologous receiver domain
AL464_21550	SM00382	ATPases associated with a variety of cellular activities
AL464_21555	SM00382	ATPases associated with a variety of cellular activities
AL464_21580	SM00470	ParB-like nuclease domain
AL464_21650	SM00382	ATPases associated with a variety of cellular activities
AL464_21655	SM00052	Putative diguanylate phosphodiesterase
AL464_21655	SM00267	diguanylate cyclase
AL464_21670	SM00448	cheY-homologous receiver domain
AL464_21675	SM00387	Histidine kinase-like ATPases
AL464_21675	SM00388	His Kinase A (phosphoacceptor) domain
AL464_21685	SM00421	helix_turn_helix, Lux Regulon
AL464_21690	SM00342	helix_turn_helix, arabinose operon control protein
AL464_21715	SM00360	RNA recognition motif
AL464_21735	SM00344	helix_turn_helix ASNC type
AL464_21745	SM00382	ATPases associated with a variety of cellular activities
AL464_21755	SM00342	helix_turn_helix, arabinose operon control protein
AL464_21770	SM00487	DEAD-like helicases superfamily
AL464_21770	SM00490	helicase superfamily c-terminal domain
AL464_21780	SM00342	helix_turn_helix, arabinose operon control protein
AL464_21785	SM00829	Enoylreductase
AL464_21800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_21850	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_21870	SM00342	helix_turn_helix, arabinose operon control protein
AL464_21885	SM01007	Class II Aldolase and Adducin N-terminal domain
AL464_21900	SM00382	ATPases associated with a variety of cellular activities
AL464_21925	SM00448	cheY-homologous receiver domain
AL464_21925	SM00862	Transcriptional regulatory protein, C terminal
AL464_21930	SM00387	Histidine kinase-like ATPases
AL464_21990	SM00382	ATPases associated with a variety of cellular activities
AL464_21995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_21995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_22025	SM00857	Resolvase, N terminal domain
AL464_22030	SM00642	Alpha-amylase domain
AL464_22050	SM00642	Alpha-amylase domain
AL464_22060	SM00642	Alpha-amylase domain
AL464_22065	SM00671	Sel1-like repeats.
AL464_22085	SM00966	SpoVT / AbrB like domain 
AL464_22135	SM00421	helix_turn_helix, Lux Regulon
AL464_22150	SM00642	Alpha-amylase domain
AL464_22160	SM00642	Alpha-amylase domain
AL464_22220	SM00226	Low molecular weight phosphatase family
AL464_22250	SM00450	Rhodanese Homology Domain
AL464_22265	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_22270	SM00642	Alpha-amylase domain
AL464_22275	SM00342	helix_turn_helix, arabinose operon control protein
AL464_22520	SM00382	ATPases associated with a variety of cellular activities
AL464_22545	SM00382	ATPases associated with a variety of cellular activities
AL464_22555	SM00020	Trypsin-like serine protease
AL464_22575	SM00481	DNA polymerase alpha chain like domain
AL464_22620	SM00448	cheY-homologous receiver domain
AL464_22620	SM00862	Transcriptional regulatory protein, C terminal
AL464_22625	SM00388	His Kinase A (phosphoacceptor) domain
AL464_22640	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_22645	SM00052	Putative diguanylate phosphodiesterase
AL464_22645	SM00267	diguanylate cyclase
AL464_22655	SM00829	Enoylreductase
AL464_22660	SM00972	Spore Coat Protein U domain
AL464_22680	SM00972	Spore Coat Protein U domain
AL464_22685	SM01057	Eukaryotic-type carbonic anhydrase
AL464_22720	SM00382	ATPases associated with a variety of cellular activities
AL464_22735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_22735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_22750	SM00587	ZnF_C4 abd HLH domain containing kinases domain
AL464_22780	SM00382	ATPases associated with a variety of cellular activities
AL464_22800	SM00267	diguanylate cyclase
AL464_22805	SM00028	Tetratricopeptide repeats
AL464_22825	SM00422	helix_turn_helix, mercury resistance
AL464_22835	SM00257	Lysin motif
AL464_22845	SM00487	DEAD-like helicases superfamily
AL464_22845	SM00490	helicase superfamily c-terminal domain
AL464_22875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_22875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_22895	SM00382	ATPases associated with a variety of cellular activities
AL464_22900	SM00267	diguanylate cyclase
AL464_22915	SM00327	von Willebrand factor (vWF) type A domain
AL464_22935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_22935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_22945	SM00421	helix_turn_helix, Lux Regulon
AL464_22950	SM00421	helix_turn_helix, Lux Regulon
AL464_22960	SM00382	ATPases associated with a variety of cellular activities
AL464_23000	SM00382	ATPases associated with a variety of cellular activities
AL464_23010	SM00382	ATPases associated with a variety of cellular activities
AL464_23015	SM00387	Histidine kinase-like ATPases
AL464_23015	SM00388	His Kinase A (phosphoacceptor) domain
AL464_23020	SM00448	cheY-homologous receiver domain
AL464_23020	SM00862	Transcriptional regulatory protein, C terminal
AL464_23035	SM00052	Putative diguanylate phosphodiesterase
AL464_23065	SM00342	helix_turn_helix, arabinose operon control protein
AL464_23090	SM01060	AL464_23090
AL464_23100	SM00829	Enoylreductase
AL464_23110	SM01022	AL464_23110
AL464_23170	SM00382	ATPases associated with a variety of cellular activities
AL464_23210	SM00052	Putative diguanylate phosphodiesterase
AL464_23240	SM00246	Wiskott Aldrich syndrome homology region 2
AL464_23615	SM01234	AL464_23615
AL464_23750	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_25415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
