VPBB_0006 SM00382 ATPases associated with a variety of cellular activities VPBB_0008 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_0008 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VPBB_0010 SM00382 ATPases associated with a variety of cellular activities VPBB_0010 SM00760 Bacterial dnaA protein helix-turn-helix domain VPBB_0011 SM00480 DNA polymerase III beta subunit VPBB_0013 SM00387 Histidine kinase-like ATPases VPBB_0013 SM00433 TopoisomeraseII VPBB_0018 SM00642 Alpha-amylase domain VPBB_0027 SM00829 Enoylreductase VPBB_0043 SM00382 ATPases associated with a variety of cellular activities VPBB_0052 SM00220 Serine/Threonine protein kinases, catalytic domain VPBB_0053 SM00354 helix_turn _helix lactose operon repressor VPBB_0066 SM00344 helix_turn_helix ASNC type VPBB_0075 SM00382 ATPases associated with a variety of cellular activities VPBB_0076 SM00749 bacterial OsmY and nodulation domain VPBB_0079 SM00046 Diacylglycerol kinase catalytic domain (presumed) VPBB_0079 SM00195 Dual specificity phosphatase, catalytic domain VPBB_0079 SM00404 Protein tyrosine phosphatase, catalytic domain motif VPBB_0087 SM00052 Putative diguanylate phosphodiesterase VPBB_0087 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_0087 SM00091 PAS domain VPBB_0087 SM00267 diguanylate cyclase VPBB_0097 SM01004 Delta-aminolevulinic acid dehydratase VPBB_0099 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VPBB_0099 SM00474 3'-5' exonuclease VPBB_0099 SM00475 5'-3' exonuclease VPBB_0099 SM00482 DNA polymerase A domain VPBB_0105 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_0107 SM00052 Putative diguanylate phosphodiesterase VPBB_0107 SM00267 diguanylate cyclase VPBB_0107 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_0108 SM00382 ATPases associated with a variety of cellular activities VPBB_0108 SM00448 cheY-homologous receiver domain VPBB_0109 SM00091 PAS domain VPBB_0109 SM00387 Histidine kinase-like ATPases VPBB_0109 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0111 SM01230 VPBB_0111 VPBB_0124 SM00382 ATPases associated with a variety of cellular activities VPBB_0140 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_0140 SM00732 Likely ribonuclease with RNase H fold. VPBB_0144 SM00448 cheY-homologous receiver domain VPBB_0144 SM00862 Transcriptional regulatory protein, C terminal VPBB_0145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_0145 SM00387 Histidine kinase-like ATPases VPBB_0145 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0148 SM00487 DEAD-like helicases superfamily VPBB_0148 SM00490 helicase superfamily c-terminal domain VPBB_0150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_0150 SM00954 Region found in RelA / SpoT proteins VPBB_0151 SM01409 VPBB_0151 VPBB_0152 SM00072 Guanylate kinase homologues. VPBB_0153 SM00028 Tetratricopeptide repeats VPBB_0190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_0190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_0190 SM01049 VPBB_0190 VPBB_0196 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VPBB_0196 SM01232 VPBB_0196 VPBB_0198 SM00672 Putative lipopolysaccharide-modifying enzyme. VPBB_0231 SM00984 UDP binding domain VPBB_0248 SM00984 UDP binding domain VPBB_0263 SM00382 ATPases associated with a variety of cellular activities VPBB_0263 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_0266 SM00354 helix_turn _helix lactose operon repressor VPBB_0267 SM00487 DEAD-like helicases superfamily VPBB_0267 SM00490 helicase superfamily c-terminal domain VPBB_0269 SM01403 VPBB_0269 VPBB_0273 SM01382 VPBB_0273 VPBB_0273 SM01383 VPBB_0273 VPBB_0276 SM00322 K homology RNA-binding domain VPBB_0280 SM01374 VPBB_0280 VPBB_0281 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VPBB_0294 SM00363 S4 RNA-binding domain VPBB_0294 SM01390 VPBB_0294 VPBB_0295 SM00662 RNA polymerases D VPBB_0301 SM00487 DEAD-like helicases superfamily VPBB_0301 SM00490 helicase superfamily c-terminal domain VPBB_0312 SM00382 ATPases associated with a variety of cellular activities VPBB_0328 SM00382 ATPases associated with a variety of cellular activities VPBB_0345 SM00650 Ribosomal RNA adenine dimethylases VPBB_0349 SM00271 DnaJ molecular chaperone homology domain VPBB_0353 SM01329 VPBB_0353 VPBB_0354 SM00917 LeuA allosteric (dimerisation) domain VPBB_0355 SM00287 Bacterial SH3 domain homologues VPBB_0356 SM00014 Acid phosphatase homologues VPBB_0362 SM00267 diguanylate cyclase VPBB_0363 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_0365 SM00420 helix_turn_helix, Deoxyribose operon repressor VPBB_0365 SM01134 VPBB_0365 VPBB_0368 SM00448 cheY-homologous receiver domain VPBB_0368 SM00862 Transcriptional regulatory protein, C terminal VPBB_0369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_0369 SM00387 Histidine kinase-like ATPases VPBB_0369 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0379 SM00563 Phosphate acyltransferases VPBB_0383 SM00052 Putative diguanylate phosphodiesterase VPBB_0384 SM00342 helix_turn_helix, arabinose operon control protein VPBB_0388 SM00400 zinc finger VPBB_0388 SM00493 VPBB_0388 VPBB_0388 SM00766 DNA primase DnaG DnaB-binding VPBB_0393 SM01207 VPBB_0393 VPBB_0394 SM00905 Dihydroneopterin aldolase VPBB_0398 SM00382 ATPases associated with a variety of cellular activities VPBB_0400 SM00287 Bacterial SH3 domain homologues VPBB_0403 SM00880 VPBB_0403 VPBB_0403 SM01118 VPBB_0403 VPBB_0405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_0413 SM00387 Histidine kinase-like ATPases VPBB_0413 SM00433 TopoisomeraseII VPBB_0414 SM00434 DNA Topoisomerase IV VPBB_0415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VPBB_0416 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VPBB_0427 SM00749 bacterial OsmY and nodulation domain VPBB_0443 SM00842 Cell division protein FtsA VPBB_0444 SM00864 Tubulin/FtsZ family, GTPase domain VPBB_0444 SM00865 Tubulin/FtsZ family, C-terminal domain VPBB_0447 SM00957 SecA DEAD-like domain VPBB_0447 SM00958 SecA preprotein cross-linking domain VPBB_0450 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VPBB_0451 SM00851 MGS-like domain VPBB_0451 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VPBB_0464 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_0465 SM00091 PAS domain VPBB_0465 SM00267 diguanylate cyclase VPBB_0466 SM00073 Histidine Phosphotransfer domain VPBB_0466 SM00091 PAS domain VPBB_0466 SM00387 Histidine kinase-like ATPases VPBB_0466 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0466 SM00448 cheY-homologous receiver domain VPBB_0468 SM00448 cheY-homologous receiver domain VPBB_0468 SM00862 Transcriptional regulatory protein, C terminal VPBB_0476 SM00518 AP endonuclease family 2 VPBB_0477 SM00986 Uracil DNA glycosylase superfamily VPBB_0477 SM00987 UreE urease accessory protein, C-terminal domain VPBB_0491 SM00382 ATPases associated with a variety of cellular activities VPBB_0495 SM00927 DNA mismatch repair enzyme MutH VPBB_0497 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VPBB_0501 SM01154 VPBB_0501 VPBB_0504 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VPBB_0507 SM00904 Riboflavin kinase VPBB_0512 SM00448 cheY-homologous receiver domain VPBB_0512 SM00850 LytTr DNA-binding domain VPBB_0521 SM00830 Chorismate mutase type II VPBB_0524 SM00382 ATPases associated with a variety of cellular activities VPBB_0528 SM00830 Chorismate mutase type II VPBB_0530 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_0532 SM00363 S4 RNA-binding domain VPBB_0534 SM00382 ATPases associated with a variety of cellular activities VPBB_0534 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_0543 SM00448 cheY-homologous receiver domain VPBB_0543 SM00862 Transcriptional regulatory protein, C terminal VPBB_0544 SM00091 PAS domain VPBB_0544 SM00387 Histidine kinase-like ATPases VPBB_0544 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0550 SM00382 ATPases associated with a variety of cellular activities VPBB_0558 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_0559 SM00020 Trypsin-like serine protease VPBB_0562 SM01323 VPBB_0562 VPBB_0571 SM00271 DnaJ molecular chaperone homology domain VPBB_0576 SM00562 VPBB_0576 VPBB_0578 SM00530 Helix-turn-helix XRE-family like proteins VPBB_0582 SM00564 beta-propeller repeat VPBB_0583 SM00382 ATPases associated with a variety of cellular activities VPBB_0587 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_0587 SM01240 VPBB_0587 VPBB_0590 SM00495 Chitin-binding domain type 3 VPBB_0608 SM00506 Appr-1"-p processing enzyme VPBB_0609 SM00857 Resolvase, N terminal domain VPBB_0626 SM00271 DnaJ molecular chaperone homology domain VPBB_0635 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_0636 SM01211 VPBB_0636 VPBB_0646 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VPBB_0656 SM00861 Transketolase, pyrimidine binding domain VPBB_0662 SM00981 VPBB_0662 VPBB_0667 SM00477 DNA/RNA non-specific endonuclease VPBB_0667 SM00892 DNA/RNA non-specific endonuclease VPBB_0670 SM00267 diguanylate cyclase VPBB_0671 SM00028 Tetratricopeptide repeats VPBB_0677 SM00382 ATPases associated with a variety of cellular activities VPBB_0677 SM00930 VPBB_0677 VPBB_0680 SM00354 helix_turn _helix lactose operon repressor VPBB_0682 SM00642 Alpha-amylase domain VPBB_0684 SM00862 Transcriptional regulatory protein, C terminal VPBB_0687 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_0690 SM00936 Penicillin-binding protein 5, C-terminal domain VPBB_0701 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_0701 SM01091 Transporter associated domain VPBB_0704 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_0708 SM01400 VPBB_0708 VPBB_0712 SM00937 VPBB_0712 VPBB_0719 SM00363 S4 RNA-binding domain VPBB_0720 SM00463 Small MutS-related domain VPBB_0723 SM01081 Putative carbohydrate binding domain VPBB_0739 SM00858 VPBB_0739 VPBB_0740 SM00260 Two component signalling adaptor domain VPBB_0740 SM00448 cheY-homologous receiver domain VPBB_0741 SM00138 Methyltransferase, chemotaxis proteins VPBB_0751 SM00047 Lysozyme subfamily 2 VPBB_0762 SM00771 ZipA, C-terminal domain (FtsZ-binding) VPBB_0763 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VPBB_0763 SM00292 breast cancer carboxy-terminal domain VPBB_0763 SM00532 Ligase N family VPBB_0766 SM00244 prohibitin homologues VPBB_0772 SM00938 Nitrogen regulatory protein P-II VPBB_0773 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_0778 SM00862 Transcriptional regulatory protein, C terminal VPBB_0779 SM00387 Histidine kinase-like ATPases VPBB_0783 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VPBB_0804 SM00861 Transketolase, pyrimidine binding domain VPBB_0807 SM00881 CoA binding domain VPBB_0809 SM00382 ATPases associated with a variety of cellular activities VPBB_0811 SM00342 helix_turn_helix, arabinose operon control protein VPBB_0816 SM00836 DALR anticodon binding domain VPBB_0816 SM01016 Arginyl tRNA synthetase N terminal dom VPBB_0819 SM00487 DEAD-like helicases superfamily VPBB_0819 SM00491 VPBB_0819 VPBB_0825 SM00474 3'-5' exonuclease VPBB_0834 SM00857 Resolvase, N terminal domain VPBB_0840 SM00825 Beta-ketoacyl synthase VPBB_0841 SM00822 VPBB_0841 VPBB_0843 SM00825 Beta-ketoacyl synthase VPBB_0855 SM00563 Phosphate acyltransferases VPBB_0861 SM01091 Transporter associated domain VPBB_0862 SM00487 DEAD-like helicases superfamily VPBB_0862 SM00490 helicase superfamily c-terminal domain VPBB_0865 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VPBB_0872 SM00382 ATPases associated with a variety of cellular activities VPBB_0872 SM00448 cheY-homologous receiver domain VPBB_0873 SM00387 Histidine kinase-like ATPases VPBB_0873 SM00388 His Kinase A (phosphoacceptor) domain VPBB_0876 SM00382 ATPases associated with a variety of cellular activities VPBB_0876 SM00994 ClpX C4-type zinc finger VPBB_0876 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_0877 SM00382 ATPases associated with a variety of cellular activities VPBB_0877 SM00464 Found in ATP-dependent protease La (LON) VPBB_0878 SM00411 bacterial (prokaryotic) histone like domain VPBB_0880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VPBB_0882 SM01144 VPBB_0882 VPBB_0883 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_0884 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_0890 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VPBB_0894 SM00563 Phosphate acyltransferases VPBB_0897 SM00978 VPBB_0897 VPBB_0904 SM00344 helix_turn_helix ASNC type VPBB_0910 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_0910 SM00267 diguanylate cyclase VPBB_0918 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_0918 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_0928 SM00487 DEAD-like helicases superfamily VPBB_0928 SM00490 helicase superfamily c-terminal domain VPBB_0928 SM00982 VPBB_0928 VPBB_0928 SM01058 CarD-like/TRCF domain VPBB_0931 SM00382 ATPases associated with a variety of cellular activities VPBB_0934 SM00849 Metallo-beta-lactamase superfamily VPBB_0935 SM00382 ATPases associated with a variety of cellular activities VPBB_0941 SM00763 PrkA AAA domain VPBB_0949 SM00382 ATPases associated with a variety of cellular activities VPBB_0950 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_0950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VPBB_0953 SM01276 VPBB_0953 VPBB_0958 SM00491 VPBB_0958 VPBB_0963 SM00357 Cold shock protein domain VPBB_0965 SM00382 ATPases associated with a variety of cellular activities VPBB_0965 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_0967 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_0973 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VPBB_0973 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VPBB_0973 SM00493 VPBB_0973 VPBB_0980 SM00354 helix_turn _helix lactose operon repressor VPBB_0982 SM00448 cheY-homologous receiver domain VPBB_0982 SM00862 Transcriptional regulatory protein, C terminal VPBB_0997 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_0998 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VPBB_0999 SM00382 ATPases associated with a variety of cellular activities VPBB_1009 SM00028 Tetratricopeptide repeats VPBB_1016 SM00387 Histidine kinase-like ATPases VPBB_1016 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1016 SM00448 cheY-homologous receiver domain VPBB_1018 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1021 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_1032 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VPBB_1032 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VPBB_1033 SM00344 helix_turn_helix ASNC type VPBB_1034 SM00843 VPBB_1034 VPBB_1036 SM00382 ATPases associated with a variety of cellular activities VPBB_1041 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_1041 SM00876 Biotin and Thiamin Synthesis associated domain VPBB_1060 SM00528 Domain in histone-like proteins of HNS family VPBB_1073 SM00052 Putative diguanylate phosphodiesterase VPBB_1076 SM00840 VPBB_1076 VPBB_1091 SM01131 VPBB_1091 VPBB_1094 SM00382 ATPases associated with a variety of cellular activities VPBB_1110 SM00155 Phospholipase D. Active site motifs. VPBB_1112 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1112 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1117 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VPBB_1117 SM00382 ATPases associated with a variety of cellular activities VPBB_1126 SM00450 Rhodanese Homology Domain VPBB_1127 SM00387 Histidine kinase-like ATPases VPBB_1127 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1128 SM00421 helix_turn_helix, Lux Regulon VPBB_1128 SM00448 cheY-homologous receiver domain VPBB_1135 SM00387 Histidine kinase-like ATPases VPBB_1136 SM00448 cheY-homologous receiver domain VPBB_1136 SM00862 Transcriptional regulatory protein, C terminal VPBB_1138 SM00487 DEAD-like helicases superfamily VPBB_1138 SM00490 helicase superfamily c-terminal domain VPBB_1139 SM00363 S4 RNA-binding domain VPBB_1149 SM00382 ATPases associated with a variety of cellular activities VPBB_1167 SM00448 cheY-homologous receiver domain VPBB_1168 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1168 SM00387 Histidine kinase-like ATPases VPBB_1173 SM00382 ATPases associated with a variety of cellular activities VPBB_1179 SM00267 diguanylate cyclase VPBB_1182 SM00919 Malic enzyme, NAD binding domain VPBB_1182 SM01274 VPBB_1182 VPBB_1183 SM00487 DEAD-like helicases superfamily VPBB_1183 SM00490 helicase superfamily c-terminal domain VPBB_1183 SM00847 Helicase associated domain (HA2) Add an annotation VPBB_1201 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_1201 SM00866 VPBB_1201 VPBB_1204 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VPBB_1209 SM00530 Helix-turn-helix XRE-family like proteins VPBB_1214 SM00267 diguanylate cyclase VPBB_1216 SM00873 B3/4 domain VPBB_1216 SM00874 tRNA synthetase B5 domain VPBB_1216 SM00896 Ferredoxin-fold anticodon binding domain VPBB_1218 SM00411 bacterial (prokaryotic) histone like domain VPBB_1225 SM00479 VPBB_1225 VPBB_1232 SM00855 Phosphoglycerate mutase family VPBB_1236 SM00382 ATPases associated with a variety of cellular activities VPBB_1250 SM00245 tail specific protease VPBB_1252 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_1252 SM00895 VPBB_1252 VPBB_1258 SM01130 VPBB_1258 VPBB_1259 SM00382 ATPases associated with a variety of cellular activities VPBB_1263 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VPBB_1265 SM00382 ATPases associated with a variety of cellular activities VPBB_1266 SM00382 ATPases associated with a variety of cellular activities VPBB_1289 SM00855 Phosphoglycerate mutase family VPBB_1293 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1293 SM00387 Histidine kinase-like ATPases VPBB_1294 SM00448 cheY-homologous receiver domain VPBB_1295 SM00052 Putative diguanylate phosphodiesterase VPBB_1295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_1295 SM00091 PAS domain VPBB_1295 SM00267 diguanylate cyclase VPBB_1296 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_1307 SM00382 ATPases associated with a variety of cellular activities VPBB_1308 SM00382 ATPases associated with a variety of cellular activities VPBB_1308 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_1315 SM00220 Serine/Threonine protein kinases, catalytic domain VPBB_1326 SM00240 Forkhead associated domain VPBB_1336 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VPBB_1337 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_1343 SM00382 ATPases associated with a variety of cellular activities VPBB_1352 SM00267 diguanylate cyclase VPBB_1352 SM01079 VPBB_1352 VPBB_1353 SM00479 VPBB_1353 VPBB_1358 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VPBB_1364 SM00382 ATPases associated with a variety of cellular activities VPBB_1364 SM00487 DEAD-like helicases superfamily VPBB_1364 SM00490 helicase superfamily c-terminal domain VPBB_1364 SM00847 Helicase associated domain (HA2) Add an annotation VPBB_1379 SM00382 ATPases associated with a variety of cellular activities VPBB_1379 SM00448 cheY-homologous receiver domain VPBB_1391 SM00448 cheY-homologous receiver domain VPBB_1392 SM00267 diguanylate cyclase VPBB_1395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1401 SM01144 VPBB_1401 VPBB_1404 SM00852 Probable molybdopterin binding domain VPBB_1409 SM00382 ATPases associated with a variety of cellular activities VPBB_1409 SM00448 cheY-homologous receiver domain VPBB_1410 SM00387 Histidine kinase-like ATPases VPBB_1410 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1411 SM00382 ATPases associated with a variety of cellular activities VPBB_1418 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VPBB_1435 SM00382 ATPases associated with a variety of cellular activities VPBB_1441 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1441 SM00419 helix_turn_helix, cAMP Regulatory protein VPBB_1451 SM00897 FIST N domain VPBB_1451 SM01204 VPBB_1451 VPBB_1452 SM00387 Histidine kinase-like ATPases VPBB_1452 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1452 SM00448 cheY-homologous receiver domain VPBB_1458 SM00382 ATPases associated with a variety of cellular activities VPBB_1460 SM00981 VPBB_1460 VPBB_1466 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VPBB_1466 SM00245 tail specific protease VPBB_1467 SM00945 ProQ/FINO family VPBB_1469 SM00382 ATPases associated with a variety of cellular activities VPBB_1473 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_1479 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_1482 SM00382 ATPases associated with a variety of cellular activities VPBB_1487 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1489 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VPBB_1493 SM00327 von Willebrand factor (vWF) type A domain VPBB_1493 SM00736 Dystroglycan-type cadherin-like domains. VPBB_1497 SM00028 Tetratricopeptide repeats VPBB_1497 SM00267 diguanylate cyclase VPBB_1502 SM00020 Trypsin-like serine protease VPBB_1502 SM00495 Chitin-binding domain type 3 VPBB_1509 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_1509 SM00895 VPBB_1509 VPBB_1528 SM00382 ATPases associated with a variety of cellular activities VPBB_1558 SM00342 helix_turn_helix, arabinose operon control protein VPBB_1563 SM00382 ATPases associated with a variety of cellular activities VPBB_1568 SM01350 VPBB_1568 VPBB_1571 SM00448 cheY-homologous receiver domain VPBB_1572 SM00091 PAS domain VPBB_1572 SM00387 Histidine kinase-like ATPases VPBB_1583 SM00479 VPBB_1583 VPBB_1584 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1584 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_1585 SM00382 ATPases associated with a variety of cellular activities VPBB_1590 SM01236 VPBB_1590 VPBB_1591 SM00822 VPBB_1591 VPBB_1593 SM00448 cheY-homologous receiver domain VPBB_1593 SM00862 Transcriptional regulatory protein, C terminal VPBB_1594 SM00387 Histidine kinase-like ATPases VPBB_1594 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1610 SM00028 Tetratricopeptide repeats VPBB_1612 SM00052 Putative diguanylate phosphodiesterase VPBB_1612 SM00267 diguanylate cyclase VPBB_1612 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1613 SM00387 Histidine kinase-like ATPases VPBB_1613 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1613 SM00448 cheY-homologous receiver domain VPBB_1616 SM01266 VPBB_1616 VPBB_1618 SM01118 VPBB_1618 VPBB_1621 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_1623 SM00342 helix_turn_helix, arabinose operon control protein VPBB_1625 SM00635 Bacterial Ig-like domain 2 VPBB_1627 SM00052 Putative diguanylate phosphodiesterase VPBB_1628 SM01131 VPBB_1628 VPBB_1635 SM00530 Helix-turn-helix XRE-family like proteins VPBB_1637 SM01230 VPBB_1637 VPBB_1650 SM00974 VPBB_1650 VPBB_1656 SM00382 ATPases associated with a variety of cellular activities VPBB_1721 SM00091 PAS domain VPBB_1721 SM00382 ATPases associated with a variety of cellular activities VPBB_1727 SM00387 Histidine kinase-like ATPases VPBB_1727 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1727 SM00448 cheY-homologous receiver domain VPBB_1732 SM00052 Putative diguanylate phosphodiesterase VPBB_1735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1738 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_1743 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1743 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_1744 SM00479 VPBB_1744 VPBB_1745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1747 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_1748 SM00421 helix_turn_helix, Lux Regulon VPBB_1748 SM00448 cheY-homologous receiver domain VPBB_1749 SM00387 Histidine kinase-like ATPases VPBB_1749 SM01049 VPBB_1749 VPBB_1755 SM00849 Metallo-beta-lactamase superfamily VPBB_1773 SM00434 DNA Topoisomerase IV VPBB_1778 SM00852 Probable molybdopterin binding domain VPBB_1786 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VPBB_1786 SM00465 GIY-YIG type nucleases (URI domain) VPBB_1787 SM00421 helix_turn_helix, Lux Regulon VPBB_1787 SM00448 cheY-homologous receiver domain VPBB_1788 SM00486 DNA polymerase type-B family VPBB_1790 SM00841 Elongation factor P, C-terminal VPBB_1790 SM01185 VPBB_1790 VPBB_1792 SM00363 S4 RNA-binding domain VPBB_1795 SM00481 DNA polymerase alpha chain like domain VPBB_1803 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_1803 SM00419 helix_turn_helix, cAMP Regulatory protein VPBB_1807 SM00387 Histidine kinase-like ATPases VPBB_1807 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1807 SM00448 cheY-homologous receiver domain VPBB_1817 SM00052 Putative diguanylate phosphodiesterase VPBB_1817 SM00091 PAS domain VPBB_1818 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_1819 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1819 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_1820 SM00448 cheY-homologous receiver domain VPBB_1820 SM00862 Transcriptional regulatory protein, C terminal VPBB_1821 SM00387 Histidine kinase-like ATPases VPBB_1821 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1822 SM00220 Serine/Threonine protein kinases, catalytic domain VPBB_1822 SM00364 Leucine-rich repeats, bacterial type VPBB_1822 SM00369 Leucine-rich repeats, typical (most populated) subfamily VPBB_1830 SM00342 helix_turn_helix, arabinose operon control protein VPBB_1832 SM00382 ATPases associated with a variety of cellular activities VPBB_1846 SM00421 helix_turn_helix, Lux Regulon VPBB_1846 SM00448 cheY-homologous receiver domain VPBB_1847 SM00387 Histidine kinase-like ATPases VPBB_1847 SM00388 His Kinase A (phosphoacceptor) domain VPBB_1850 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VPBB_1862 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VPBB_1863 SM00028 Tetratricopeptide repeats VPBB_1865 SM00411 bacterial (prokaryotic) histone like domain VPBB_1866 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_1869 SM00822 VPBB_1869 VPBB_1872 SM00481 DNA polymerase alpha chain like domain VPBB_1873 SM00260 Two component signalling adaptor domain VPBB_1873 SM00448 cheY-homologous receiver domain VPBB_1886 SM00825 Beta-ketoacyl synthase VPBB_1888 SM00822 VPBB_1888 VPBB_1889 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VPBB_1895 SM00363 S4 RNA-binding domain VPBB_1896 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_1898 SM00226 Low molecular weight phosphatase family VPBB_1906 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_1912 SM00267 diguanylate cyclase VPBB_1913 SM00642 Alpha-amylase domain VPBB_1914 SM00382 ATPases associated with a variety of cellular activities VPBB_1923 SM00382 ATPases associated with a variety of cellular activities VPBB_1924 SM00382 ATPases associated with a variety of cellular activities VPBB_1932 SM00852 Probable molybdopterin binding domain VPBB_1933 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_1936 SM00382 ATPases associated with a variety of cellular activities VPBB_1936 SM00448 cheY-homologous receiver domain VPBB_1937 SM00487 DEAD-like helicases superfamily VPBB_1937 SM00490 helicase superfamily c-terminal domain VPBB_1943 SM00900 VPBB_1943 VPBB_1945 SM00478 endonuclease III VPBB_1945 SM00525 VPBB_1945 VPBB_1949 SM00479 VPBB_1949 VPBB_1959 SM00859 Semialdehyde dehydrogenase, NAD binding domain VPBB_1969 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VPBB_1969 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VPBB_1969 SM00493 VPBB_1969 VPBB_1973 SM00870 VPBB_1973 VPBB_1979 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_1983 SM00098 Alkaline phosphatase homologues VPBB_1996 SM00493 VPBB_1996 VPBB_1998 SM00382 ATPases associated with a variety of cellular activities VPBB_2011 SM00859 Semialdehyde dehydrogenase, NAD binding domain VPBB_2013 SM00825 Beta-ketoacyl synthase VPBB_2022 SM00463 Small MutS-related domain VPBB_2023 SM00855 Phosphoglycerate mutase family VPBB_2041 SM00382 ATPases associated with a variety of cellular activities VPBB_2043 SM00260 Two component signalling adaptor domain VPBB_2044 SM00260 Two component signalling adaptor domain VPBB_2046 SM00448 cheY-homologous receiver domain VPBB_2047 SM00073 Histidine Phosphotransfer domain VPBB_2047 SM00260 Two component signalling adaptor domain VPBB_2047 SM00387 Histidine kinase-like ATPases VPBB_2047 SM01231 VPBB_2047 VPBB_2052 SM00382 ATPases associated with a variety of cellular activities VPBB_2052 SM00962 SRP54-type protein, GTPase domain VPBB_2064 SM00382 ATPases associated with a variety of cellular activities VPBB_2069 SM00382 ATPases associated with a variety of cellular activities VPBB_2069 SM00448 cheY-homologous receiver domain VPBB_2071 SM00382 ATPases associated with a variety of cellular activities VPBB_2089 SM01130 VPBB_2089 VPBB_2108 SM00479 VPBB_2108 VPBB_2112 SM00257 Lysin motif VPBB_2115 SM00938 Nitrogen regulatory protein P-II VPBB_2117 SM00977 TilS substrate C-terminal domain VPBB_2119 SM00481 DNA polymerase alpha chain like domain VPBB_2125 SM00935 Outer membrane protein (OmpH-like) VPBB_2127 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VPBB_2136 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_2153 SM00495 Chitin-binding domain type 3 VPBB_2153 SM00636 VPBB_2153 VPBB_2156 SM00487 DEAD-like helicases superfamily VPBB_2156 SM00490 helicase superfamily c-terminal domain VPBB_2165 SM00487 DEAD-like helicases superfamily VPBB_2168 SM00382 ATPases associated with a variety of cellular activities VPBB_2179 SM00900 VPBB_2179 VPBB_2195 SM00267 diguanylate cyclase VPBB_2198 SM00925 MltA specific insert domain VPBB_2215 SM00420 helix_turn_helix, Deoxyribose operon repressor VPBB_2215 SM01134 VPBB_2215 VPBB_2222 SM00354 helix_turn _helix lactose operon repressor VPBB_2223 SM00479 VPBB_2223 VPBB_2224 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_2230 SM00354 helix_turn _helix lactose operon repressor VPBB_2231 SM01038 Beta galactosidase small chain VPBB_2237 SM00028 Tetratricopeptide repeats VPBB_2247 SM00858 VPBB_2247 VPBB_2248 SM00382 ATPases associated with a variety of cellular activities VPBB_2250 SM00342 helix_turn_helix, arabinose operon control protein VPBB_2254 SM00838 Elongation factor G C-terminus VPBB_2254 SM00889 Elongation factor G, domain IV VPBB_2255 SM00382 ATPases associated with a variety of cellular activities VPBB_2261 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VPBB_2262 SM01133 VPBB_2262 VPBB_2272 SM00052 Putative diguanylate phosphodiesterase VPBB_2272 SM00091 PAS domain VPBB_2272 SM00267 diguanylate cyclase VPBB_2276 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_2277 SM00028 Tetratricopeptide repeats VPBB_2278 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_2278 SM00322 K homology RNA-binding domain VPBB_2279 SM01387 VPBB_2279 VPBB_2283 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_2288 SM00382 ATPases associated with a variety of cellular activities VPBB_2290 SM01103 VPBB_2290 VPBB_2304 SM00091 PAS domain VPBB_2304 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_2304 SM00387 Histidine kinase-like ATPases VPBB_2304 SM00388 His Kinase A (phosphoacceptor) domain VPBB_2304 SM00448 cheY-homologous receiver domain VPBB_2308 SM00382 ATPases associated with a variety of cellular activities VPBB_2309 SM00382 ATPases associated with a variety of cellular activities VPBB_2313 SM01068 Putative carbohydrate binding domain VPBB_2315 SM00382 ATPases associated with a variety of cellular activities VPBB_2319 SM00938 Nitrogen regulatory protein P-II VPBB_2324 SM00487 DEAD-like helicases superfamily VPBB_2324 SM00490 helicase superfamily c-terminal domain VPBB_2324 SM00847 Helicase associated domain (HA2) Add an annotation VPBB_2334 SM00382 ATPases associated with a variety of cellular activities VPBB_2336 SM00947 Carbonic anhydrase VPBB_2342 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_2342 SM00895 VPBB_2342 VPBB_2343 SM00644 VPBB_2343 VPBB_2356 SM00382 ATPases associated with a variety of cellular activities VPBB_2356 SM00962 SRP54-type protein, GTPase domain VPBB_2356 SM00963 SRP54-type protein, helical bundle domain VPBB_2358 SM01091 Transporter associated domain VPBB_2364 SM00829 Enoylreductase VPBB_2372 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VPBB_2374 SM00382 ATPases associated with a variety of cellular activities VPBB_2376 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VPBB_2376 SM00534 ATPase domain of DNA mismatch repair MUTS family VPBB_2378 SM00257 Lysin motif VPBB_2385 SM01192 VPBB_2385 VPBB_2385 SM01193 VPBB_2385 VPBB_2388 SM00954 Region found in RelA / SpoT proteins VPBB_2390 SM00073 Histidine Phosphotransfer domain VPBB_2390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_2390 SM00387 Histidine kinase-like ATPases VPBB_2390 SM00388 His Kinase A (phosphoacceptor) domain VPBB_2390 SM00448 cheY-homologous receiver domain VPBB_2395 SM00358 Double-stranded RNA binding motif VPBB_2395 SM00535 Ribonuclease III family VPBB_2397 SM00838 Elongation factor G C-terminus VPBB_2422 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPBB_2425 SM00861 Transketolase, pyrimidine binding domain VPBB_2428 SM00731 SprT homologues. VPBB_2433 SM00732 Likely ribonuclease with RNase H fold. VPBB_2439 SM01152 VPBB_2439 VPBB_2442 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_2446 SM00478 endonuclease III VPBB_2446 SM00525 VPBB_2446 VPBB_2449 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_2449 SM01049 VPBB_2449 VPBB_2451 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_2452 SM00354 helix_turn _helix lactose operon repressor VPBB_2458 SM00495 Chitin-binding domain type 3 VPBB_2468 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_2477 SM00563 Phosphate acyltransferases VPBB_2485 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_2488 SM00382 ATPases associated with a variety of cellular activities VPBB_2494 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_2494 SM00924 MgtE intracellular N domain VPBB_2501 SM00487 DEAD-like helicases superfamily VPBB_2501 SM00490 helicase superfamily c-terminal domain VPBB_2502 SM00670 Large family of predicted nucleotide-binding domains VPBB_2506 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_2521 SM00382 ATPases associated with a variety of cellular activities VPBB_2522 SM00028 Tetratricopeptide repeats VPBB_2524 SM00965 Secretin and TonB N terminus short domain VPBB_2528 SM00052 Putative diguanylate phosphodiesterase VPBB_2528 SM00267 diguanylate cyclase VPBB_2530 SM00421 helix_turn_helix, Lux Regulon VPBB_2537 SM01018 B12 binding domain VPBB_2592 SM01005 Alanine racemase, C-terminal domain VPBB_2604 SM00965 Secretin and TonB N terminus short domain VPBB_2616 SM00859 Semialdehyde dehydrogenase, NAD binding domain VPBB_2624 SM00919 Malic enzyme, NAD binding domain VPBB_2624 SM01274 VPBB_2624 VPBB_2627 SM00838 Elongation factor G C-terminus VPBB_2627 SM00889 Elongation factor G, domain IV VPBB_2635 SM00320 WD40 repeats VPBB_2642 SM00382 ATPases associated with a variety of cellular activities VPBB_2647 SM00100 Cyclic nucleotide-monophosphate binding domain VPBB_2647 SM00419 helix_turn_helix, cAMP Regulatory protein VPBB_2648 SM01150 VPBB_2648 VPBB_2657 SM00967 RNA 2'-O ribose methyltransferase substrate binding VPBB_2658 SM00316 Ribosomal protein S1-like RNA-binding domain VPBB_2658 SM00357 Cold shock protein domain VPBB_2658 SM00955 VPBB_2658 VPBB_2661 SM00671 Sel1-like repeats. VPBB_2662 SM00788 Adenylosuccinate synthetase VPBB_2664 SM00244 prohibitin homologues VPBB_2665 SM00244 prohibitin homologues VPBB_2669 SM00853 MutL C terminal dimerisation domain VPBB_2669 SM01340 VPBB_2669 VPBB_2670 SM00257 Lysin motif VPBB_2670 SM00646 VPBB_2670 VPBB_2673 SM00479 VPBB_2673 VPBB_2677 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_2677 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_2681 SM00450 Rhodanese Homology Domain VPBB_2684 SM00971 Serine acetyltransferase, N-terminal VPBB_2695 SM00841 Elongation factor P, C-terminal VPBB_2695 SM01185 VPBB_2695 VPBB_2698 SM01005 Alanine racemase, C-terminal domain VPBB_2702 SM00883 Chaperonin 10 Kd subunit VPBB_2708 SM00448 cheY-homologous receiver domain VPBB_2708 SM00862 Transcriptional regulatory protein, C terminal VPBB_2709 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_2709 SM00387 Histidine kinase-like ATPases VPBB_2709 SM00388 His Kinase A (phosphoacceptor) domain VPBB_2716 SM00421 helix_turn_helix, Lux Regulon VPBB_2716 SM00448 cheY-homologous receiver domain VPBB_2717 SM01091 Transporter associated domain VPBB_2723 SM00387 Histidine kinase-like ATPases VPBB_2723 SM00388 His Kinase A (phosphoacceptor) domain VPBB_2723 SM00448 cheY-homologous receiver domain VPBB_2726 SM00479 VPBB_2726 VPBB_2730 SM00878 Biotin carboxylase C-terminal domain VPBB_2735 SM00382 ATPases associated with a variety of cellular activities VPBB_2736 SM00267 diguanylate cyclase VPBB_2743 SM00862 Transcriptional regulatory protein, C terminal VPBB_2744 SM00422 helix_turn_helix, mercury resistance VPBB_2746 SM00798 AICARFT/IMPCHase bienzyme VPBB_2746 SM00851 MGS-like domain VPBB_2747 SM01209 VPBB_2747 VPBB_2747 SM01210 VPBB_2747 VPBB_2749 SM00411 bacterial (prokaryotic) histone like domain VPBB_2753 SM00986 Uracil DNA glycosylase superfamily VPBB_2753 SM00987 UreE urease accessory protein, C-terminal domain VPBB_2759 SM00663 RNA polymerase I subunit A N-terminus VPBB_2764 SM00649 Ribosomal protein L11/L12 VPBB_2765 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VPBB_2765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VPBB_2772 SM00155 Phospholipase D. Active site motifs. VPBB_2774 SM00360 RNA recognition motif VPBB_2785 SM00563 Phosphate acyltransferases VPBB_2790 SM00450 Rhodanese Homology Domain VPBB_2793 SM00382 ATPases associated with a variety of cellular activities VPBB_2794 SM00382 ATPases associated with a variety of cellular activities VPBB_2794 SM00962 SRP54-type protein, GTPase domain VPBB_2794 SM00963 SRP54-type protein, helical bundle domain VPBB_2807 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPBB_2808 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VPBB_2809 SM00052 Putative diguanylate phosphodiesterase VPBB_2816 SM00052 Putative diguanylate phosphodiesterase VPBB_2816 SM00897 FIST N domain VPBB_2816 SM01204 VPBB_2816 VPBB_2823 SM01219 VPBB_2823 VPBB_2828 SM00028 Tetratricopeptide repeats VPBB_2833 SM00357 Cold shock protein domain VPBB_2833 SM00382 ATPases associated with a variety of cellular activities VPBB_2833 SM00959 Rho termination factor, N-terminal domain VPBB_2835 SM00487 DEAD-like helicases superfamily VPBB_2835 SM00490 helicase superfamily c-terminal domain VPBB_2839 SM00341 Helicase and RNase D C-terminal VPBB_2839 SM00487 DEAD-like helicases superfamily VPBB_2839 SM00490 helicase superfamily c-terminal domain VPBB_2839 SM00956 VPBB_2839 VPBB_2841 SM00342 helix_turn_helix, arabinose operon control protein VPBB_2853 SM00876 Biotin and Thiamin Synthesis associated domain VPBB_2874 SM00257 Lysin motif VPBB_2889 SM00563 Phosphate acyltransferases VPBB_2914 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_2918 SM00382 ATPases associated with a variety of cellular activities VPBB_2926 SM00470 ParB-like nuclease domain VPBB_2929 SM01228 VPBB_2929 VPBB_A0003 SM00382 ATPases associated with a variety of cellular activities VPBB_A0007 SM00387 Histidine kinase-like ATPases VPBB_A0007 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0007 SM00448 cheY-homologous receiver domain VPBB_A0013 SM00382 ATPases associated with a variety of cellular activities VPBB_A0017 SM00387 Histidine kinase-like ATPases VPBB_A0018 SM00448 cheY-homologous receiver domain VPBB_A0018 SM00850 LytTr DNA-binding domain VPBB_A0021 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0021 SM01049 VPBB_A0021 VPBB_A0027 SM00382 ATPases associated with a variety of cellular activities VPBB_A0028 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A0038 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0038 SM01009 AlkA N-terminal domain VPBB_A0048 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VPBB_A0048 SM00495 Chitin-binding domain type 3 VPBB_A0048 SM00636 VPBB_A0048 VPBB_A0052 SM00267 diguanylate cyclase VPBB_A0057 SM00849 Metallo-beta-lactamase superfamily VPBB_A0061 SM00267 diguanylate cyclase VPBB_A0064 SM00829 Enoylreductase VPBB_A0067 SM00479 VPBB_A0067 VPBB_A0068 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_A0069 SM00346 helix_turn_helix isocitrate lyase regulation VPBB_A0084 SM00344 helix_turn_helix ASNC type VPBB_A0085 SM00495 Chitin-binding domain type 3 VPBB_A0094 SM00506 Appr-1"-p processing enzyme VPBB_A0109 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A0116 SM00822 VPBB_A0116 VPBB_A0120 SM00014 Acid phosphatase homologues VPBB_A0126 SM00382 ATPases associated with a variety of cellular activities VPBB_A0137 SM00448 cheY-homologous receiver domain VPBB_A0137 SM00862 Transcriptional regulatory protein, C terminal VPBB_A0138 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0138 SM00387 Histidine kinase-like ATPases VPBB_A0138 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0145 SM00028 Tetratricopeptide repeats VPBB_A0160 SM00849 Metallo-beta-lactamase superfamily VPBB_A0166 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_A0170 SM00387 Histidine kinase-like ATPases VPBB_A0171 SM00382 ATPases associated with a variety of cellular activities VPBB_A0171 SM00448 cheY-homologous receiver domain VPBB_A0172 SM00267 diguanylate cyclase VPBB_A0183 SM00267 diguanylate cyclase VPBB_A0183 SM01079 VPBB_A0183 VPBB_A0184 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0185 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A0186 SM00267 diguanylate cyclase VPBB_A0191 SM01266 VPBB_A0191 VPBB_A0203 SM01057 Eukaryotic-type carbonic anhydrase VPBB_A0206 SM00382 ATPases associated with a variety of cellular activities VPBB_A0214 SM00354 helix_turn _helix lactose operon repressor VPBB_A0219 SM00382 ATPases associated with a variety of cellular activities VPBB_A0221 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A0221 SM00866 VPBB_A0221 VPBB_A0226 SM00631 VPBB_A0226 VPBB_A0242 SM00858 VPBB_A0242 VPBB_A0258 SM01240 VPBB_A0258 VPBB_A0264 SM00450 Rhodanese Homology Domain VPBB_A0265 SM00883 Chaperonin 10 Kd subunit VPBB_A0283 SM00420 helix_turn_helix, Deoxyribose operon repressor VPBB_A0283 SM01134 VPBB_A0283 VPBB_A0285 SM01060 VPBB_A0285 VPBB_A0286 SM00248 ankyrin repeats VPBB_A0305 SM00838 Elongation factor G C-terminus VPBB_A0305 SM00889 Elongation factor G, domain IV VPBB_A0306 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VPBB_A0311 SM00422 helix_turn_helix, mercury resistance VPBB_A0312 SM00028 Tetratricopeptide repeats VPBB_A0314 SM01022 VPBB_A0314 VPBB_A0316 SM00155 Phospholipase D. Active site motifs. VPBB_A0322 SM00382 ATPases associated with a variety of cellular activities VPBB_A0327 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A0327 SM00866 VPBB_A0327 VPBB_A0330 SM00421 helix_turn_helix, Lux Regulon VPBB_A0331 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A0332 SM00267 diguanylate cyclase VPBB_A0341 SM00421 helix_turn_helix, Lux Regulon VPBB_A0345 SM00870 VPBB_A0345 VPBB_A0346 SM00788 Adenylosuccinate synthetase VPBB_A0352 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0355 SM00829 Enoylreductase VPBB_A0361 SM00487 DEAD-like helicases superfamily VPBB_A0361 SM00490 helicase superfamily c-terminal domain VPBB_A0371 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0371 SM00871 Bacterial transcription activator, effector binding domain VPBB_A0375 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0390 SM00382 ATPases associated with a variety of cellular activities VPBB_A0396 SM00729 Elongator protein 3, MiaB family, Radical SAM VPBB_A0400 SM00260 Two component signalling adaptor domain VPBB_A0400 SM00448 cheY-homologous receiver domain VPBB_A0404 SM00128 Inositol polyphosphate phosphatase, catalytic domain homologues VPBB_A0417 SM00642 Alpha-amylase domain VPBB_A0418 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VPBB_A0423 SM00382 ATPases associated with a variety of cellular activities VPBB_A0432 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VPBB_A0432 SM00267 diguanylate cyclase VPBB_A0440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VPBB_A0444 SM00382 ATPases associated with a variety of cellular activities VPBB_A0446 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0446 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0450 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0452 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VPBB_A0458 SM00481 DNA polymerase alpha chain like domain VPBB_A0460 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A0464 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0464 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0470 SM00052 Putative diguanylate phosphodiesterase VPBB_A0470 SM00267 diguanylate cyclase VPBB_A0481 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0498 SM01322 VPBB_A0498 VPBB_A0499 SM00357 Cold shock protein domain VPBB_A0501 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_A0501 SM00091 PAS domain VPBB_A0501 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0502 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_A0502 SM00267 diguanylate cyclase VPBB_A0506 SM00382 ATPases associated with a variety of cellular activities VPBB_A0509 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0509 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0532 SM00487 DEAD-like helicases superfamily VPBB_A0532 SM00490 helicase superfamily c-terminal domain VPBB_A0538 SM00833 Cobalamin synthesis protein cobW C-terminal domain VPBB_A0539 SM00487 DEAD-like helicases superfamily VPBB_A0539 SM00490 helicase superfamily c-terminal domain VPBB_A0542 SM00052 Putative diguanylate phosphodiesterase VPBB_A0543 SM00382 ATPases associated with a variety of cellular activities VPBB_A0544 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0554 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0555 SM00357 Cold shock protein domain VPBB_A0555 SM00955 VPBB_A0555 VPBB_A0556 SM00487 DEAD-like helicases superfamily VPBB_A0556 SM00490 helicase superfamily c-terminal domain VPBB_A0557 SM00052 Putative diguanylate phosphodiesterase VPBB_A0557 SM00267 diguanylate cyclase VPBB_A0559 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_A0559 SM00091 PAS domain VPBB_A0559 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0565 SM00422 helix_turn_helix, mercury resistance VPBB_A0572 SM00822 VPBB_A0572 VPBB_A0585 SM00382 ATPases associated with a variety of cellular activities VPBB_A0586 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_A0586 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VPBB_A0594 SM00861 Transketolase, pyrimidine binding domain VPBB_A0605 SM00382 ATPases associated with a variety of cellular activities VPBB_A0606 SM00422 helix_turn_helix, mercury resistance VPBB_A0608 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0620 SM00851 MGS-like domain VPBB_A0622 SM00073 Histidine Phosphotransfer domain VPBB_A0622 SM00387 Histidine kinase-like ATPases VPBB_A0622 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0622 SM00448 cheY-homologous receiver domain VPBB_A0625 SM00862 Transcriptional regulatory protein, C terminal VPBB_A0628 SM00028 Tetratricopeptide repeats VPBB_A0635 SM00327 von Willebrand factor (vWF) type A domain VPBB_A0636 SM00327 von Willebrand factor (vWF) type A domain VPBB_A0639 SM00046 Diacylglycerol kinase catalytic domain (presumed) VPBB_A0644 SM00028 Tetratricopeptide repeats VPBB_A0645 SM00990 VPBB_A0645 VPBB_A0654 SM00387 Histidine kinase-like ATPases VPBB_A0654 SM00448 cheY-homologous receiver domain VPBB_A0659 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0673 SM00327 von Willebrand factor (vWF) type A domain VPBB_A0679 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_A0679 SM00387 Histidine kinase-like ATPases VPBB_A0679 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0679 SM00448 cheY-homologous receiver domain VPBB_A0680 SM00052 Putative diguanylate phosphodiesterase VPBB_A0680 SM00448 cheY-homologous receiver domain VPBB_A0681 SM00421 helix_turn_helix, Lux Regulon VPBB_A0681 SM00448 cheY-homologous receiver domain VPBB_A0682 SM00267 diguanylate cyclase VPBB_A0684 SM00421 helix_turn_helix, Lux Regulon VPBB_A0684 SM00448 cheY-homologous receiver domain VPBB_A0685 SM00448 cheY-homologous receiver domain VPBB_A0687 SM00260 Two component signalling adaptor domain VPBB_A0687 SM00448 cheY-homologous receiver domain VPBB_A0693 SM00014 Acid phosphatase homologues VPBB_A0704 SM00387 Histidine kinase-like ATPases VPBB_A0706 SM00704 CDGSH-type zinc finger. Function unknown. VPBB_A0710 SM00953 VPBB_A0710 VPBB_A0717 SM00924 MgtE intracellular N domain VPBB_A0727 SM00422 helix_turn_helix, mercury resistance VPBB_A0733 SM00479 VPBB_A0733 VPBB_A0747 SM00487 DEAD-like helicases superfamily VPBB_A0747 SM00490 helicase superfamily c-terminal domain VPBB_A0751 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A0761 SM00354 helix_turn _helix lactose operon repressor VPBB_A0765 SM00052 Putative diguanylate phosphodiesterase VPBB_A0767 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_A0767 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VPBB_A0769 SM00382 ATPases associated with a variety of cellular activities VPBB_A0773 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0773 SM00387 Histidine kinase-like ATPases VPBB_A0773 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0774 SM00448 cheY-homologous receiver domain VPBB_A0777 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0778 SM00495 Chitin-binding domain type 3 VPBB_A0778 SM00636 VPBB_A0778 VPBB_A0784 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_A0786 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0789 SM00487 DEAD-like helicases superfamily VPBB_A0789 SM00490 helicase superfamily c-terminal domain VPBB_A0790 SM00052 Putative diguanylate phosphodiesterase VPBB_A0794 SM00867 YceI-like domain VPBB_A0795 SM00116 Domain in cystathionine beta-synthase and other proteins. VPBB_A0802 SM00782 PhnA Zinc-Ribbon VPBB_A0814 SM00271 DnaJ molecular chaperone homology domain VPBB_A0816 SM00052 Putative diguanylate phosphodiesterase VPBB_A0816 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VPBB_A0816 SM00267 diguanylate cyclase VPBB_A0818 SM00382 ATPases associated with a variety of cellular activities VPBB_A0822 SM00796 Allophanate hydrolase subunit 1 VPBB_A0824 SM00091 PAS domain VPBB_A0824 SM00267 diguanylate cyclase VPBB_A0824 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0829 SM00881 CoA binding domain VPBB_A0840 SM00448 cheY-homologous receiver domain VPBB_A0840 SM00862 Transcriptional regulatory protein, C terminal VPBB_A0841 SM00387 Histidine kinase-like ATPases VPBB_A0841 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0843 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VPBB_A0843 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VPBB_A0847 SM00267 diguanylate cyclase VPBB_A0849 SM00267 diguanylate cyclase VPBB_A0849 SM00448 cheY-homologous receiver domain VPBB_A0851 SM00382 ATPases associated with a variety of cellular activities VPBB_A0859 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0869 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VPBB_A0871 SM00450 Rhodanese Homology Domain VPBB_A0876 SM00421 helix_turn_helix, Lux Regulon VPBB_A0876 SM00448 cheY-homologous receiver domain VPBB_A0877 SM00387 Histidine kinase-like ATPases VPBB_A0886 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0906 SM00880 VPBB_A0906 VPBB_A0909 SM00642 Alpha-amylase domain VPBB_A0910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A0910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A0911 SM01005 Alanine racemase, C-terminal domain VPBB_A0918 SM00382 ATPases associated with a variety of cellular activities VPBB_A0925 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A0934 SM00382 ATPases associated with a variety of cellular activities VPBB_A0934 SM01086 C-terminal, D2-small domain, of ClpB protein VPBB_A0943 SM00331 Sigma factor PP2C-like phosphatases VPBB_A0943 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VPBB_A0949 SM00240 Forkhead associated domain VPBB_A0950 SM00220 Serine/Threonine protein kinases, catalytic domain VPBB_A0951 SM00448 cheY-homologous receiver domain VPBB_A0955 SM00331 Sigma factor PP2C-like phosphatases VPBB_A0955 SM00448 cheY-homologous receiver domain VPBB_A0962 SM00382 ATPases associated with a variety of cellular activities VPBB_A0965 SM01012 VPBB_A0965 VPBB_A0973 SM00028 Tetratricopeptide repeats VPBB_A0973 SM00267 diguanylate cyclase VPBB_A0977 SM00098 Alkaline phosphatase homologues VPBB_A0978 SM00871 Bacterial transcription activator, effector binding domain VPBB_A0979 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A0980 SM00448 cheY-homologous receiver domain VPBB_A0980 SM00862 Transcriptional regulatory protein, C terminal VPBB_A0986 SM00354 helix_turn _helix lactose operon repressor VPBB_A0990 SM00382 ATPases associated with a variety of cellular activities VPBB_A0992 SM00052 Putative diguanylate phosphodiesterase VPBB_A0992 SM00267 diguanylate cyclase VPBB_A1005 SM00387 Histidine kinase-like ATPases VPBB_A1005 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1005 SM00448 cheY-homologous receiver domain VPBB_A1007 SM00052 Putative diguanylate phosphodiesterase VPBB_A1007 SM00091 PAS domain VPBB_A1007 SM00267 diguanylate cyclase VPBB_A1010 SM00244 prohibitin homologues VPBB_A1013 SM00382 ATPases associated with a variety of cellular activities VPBB_A1019 SM00028 Tetratricopeptide repeats VPBB_A1019 SM00267 diguanylate cyclase VPBB_A1020 SM00822 VPBB_A1020 VPBB_A1027 SM00422 helix_turn_helix, mercury resistance VPBB_A1031 SM00878 Biotin carboxylase C-terminal domain VPBB_A1032 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VPBB_A1032 SM00091 PAS domain VPBB_A1032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1032 SM00387 Histidine kinase-like ATPases VPBB_A1032 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1032 SM00448 cheY-homologous receiver domain VPBB_A1036 SM01266 VPBB_A1036 VPBB_A1037 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A1048 SM00382 ATPases associated with a variety of cellular activities VPBB_A1053 SM00382 ATPases associated with a variety of cellular activities VPBB_A1056 SM00893 Electron transfer flavoprotein domain VPBB_A1057 SM00893 Electron transfer flavoprotein domain VPBB_A1059 SM01240 VPBB_A1059 VPBB_A1061 SM00091 PAS domain VPBB_A1062 SM00448 cheY-homologous receiver domain VPBB_A1070 SM00852 Probable molybdopterin binding domain VPBB_A1075 SM00450 Rhodanese Homology Domain VPBB_A1076 SM00052 Putative diguanylate phosphodiesterase VPBB_A1076 SM00267 diguanylate cyclase VPBB_A1077 SM00636 VPBB_A1077 VPBB_A1082 SM00861 Transketolase, pyrimidine binding domain VPBB_A1083 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1088 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1095 SM00421 helix_turn_helix, Lux Regulon VPBB_A1095 SM00448 cheY-homologous receiver domain VPBB_A1096 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1096 SM00387 Histidine kinase-like ATPases VPBB_A1099 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VPBB_A1105 SM00822 VPBB_A1105 VPBB_A1114 SM00344 helix_turn_helix ASNC type VPBB_A1119 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_A1120 SM00387 Histidine kinase-like ATPases VPBB_A1120 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1120 SM00448 cheY-homologous receiver domain VPBB_A1122 SM00465 GIY-YIG type nucleases (URI domain) VPBB_A1129 SM00387 Histidine kinase-like ATPases VPBB_A1129 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1129 SM00448 cheY-homologous receiver domain VPBB_A1130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPBB_A1136 SM00345 helix_turn_helix gluconate operon transcriptional repressor VPBB_A1139 SM00924 MgtE intracellular N domain VPBB_A1144 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VPBB_A1145 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A1146 SM00563 Phosphate acyltransferases VPBB_A1154 SM01065 Starch binding domain VPBB_A1156 SM00448 cheY-homologous receiver domain VPBB_A1156 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1157 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1157 SM00387 Histidine kinase-like ATPases VPBB_A1157 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1167 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_A1171 SM00357 Cold shock protein domain VPBB_A1176 SM00936 Penicillin-binding protein 5, C-terminal domain VPBB_A1186 SM00822 VPBB_A1186 VPBB_A1211 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1216 SM00382 ATPases associated with a variety of cellular activities VPBB_A1225 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1249 SM00246 Wiskott Aldrich syndrome homology region 2 VPBB_A1251 SM01276 VPBB_A1251 VPBB_A1264 SM00530 Helix-turn-helix XRE-family like proteins VPBB_A1266 SM00487 DEAD-like helicases superfamily VPBB_A1267 SM00382 ATPases associated with a variety of cellular activities VPBB_A1275 SM00382 ATPases associated with a variety of cellular activities VPBB_A1287 SM01022 VPBB_A1287 VPBB_A1289 SM00829 Enoylreductase VPBB_A1291 SM01060 VPBB_A1291 VPBB_A1295 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1301 SM00052 Putative diguanylate phosphodiesterase VPBB_A1305 SM00448 cheY-homologous receiver domain VPBB_A1305 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1306 SM00387 Histidine kinase-like ATPases VPBB_A1306 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1307 SM00382 ATPases associated with a variety of cellular activities VPBB_A1309 SM00382 ATPases associated with a variety of cellular activities VPBB_A1317 SM00382 ATPases associated with a variety of cellular activities VPBB_A1319 SM00421 helix_turn_helix, Lux Regulon VPBB_A1320 SM00421 helix_turn_helix, Lux Regulon VPBB_A1322 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1322 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1327 SM00327 von Willebrand factor (vWF) type A domain VPBB_A1328 SM00327 von Willebrand factor (vWF) type A domain VPBB_A1330 SM00267 diguanylate cyclase VPBB_A1331 SM00382 ATPases associated with a variety of cellular activities VPBB_A1335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1341 SM00487 DEAD-like helicases superfamily VPBB_A1341 SM00490 helicase superfamily c-terminal domain VPBB_A1343 SM00257 Lysin motif VPBB_A1345 SM00422 helix_turn_helix, mercury resistance VPBB_A1350 SM00028 Tetratricopeptide repeats VPBB_A1351 SM00267 diguanylate cyclase VPBB_A1355 SM00382 ATPases associated with a variety of cellular activities VPBB_A1359 SM00587 ZnF_C4 abd HLH domain containing kinases domain VPBB_A1362 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1365 SM00382 ATPases associated with a variety of cellular activities VPBB_A1372 SM01057 Eukaryotic-type carbonic anhydrase VPBB_A1373 SM00972 Spore Coat Protein U domain VPBB_A1376 SM00972 Spore Coat Protein U domain VPBB_A1377 SM00829 Enoylreductase VPBB_A1379 SM00052 Putative diguanylate phosphodiesterase VPBB_A1379 SM00267 diguanylate cyclase VPBB_A1380 SM00062 Bacterial periplasmic substrate-binding proteins VPBB_A1383 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1384 SM00448 cheY-homologous receiver domain VPBB_A1384 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1394 SM00481 DNA polymerase alpha chain like domain VPBB_A1398 SM00020 Trypsin-like serine protease VPBB_A1400 SM00382 ATPases associated with a variety of cellular activities VPBB_A1405 SM00382 ATPases associated with a variety of cellular activities VPBB_A1455 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1456 SM00642 Alpha-amylase domain VPBB_A1457 SM00936 Penicillin-binding protein 5, C-terminal domain VPBB_A1460 SM00450 Rhodanese Homology Domain VPBB_A1466 SM00226 Low molecular weight phosphatase family VPBB_A1480 SM00642 Alpha-amylase domain VPBB_A1482 SM00642 Alpha-amylase domain VPBB_A1486 SM00421 helix_turn_helix, Lux Regulon VPBB_A1497 SM00966 SpoVT / AbrB like domain VPBB_A1501 SM00671 Sel1-like repeats. VPBB_A1502 SM00642 Alpha-amylase domain VPBB_A1504 SM00642 Alpha-amylase domain VPBB_A1508 SM00642 Alpha-amylase domain VPBB_A1509 SM00857 Resolvase, N terminal domain VPBB_A1515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VPBB_A1516 SM00382 ATPases associated with a variety of cellular activities VPBB_A1528 SM00387 Histidine kinase-like ATPases VPBB_A1529 SM00448 cheY-homologous receiver domain VPBB_A1529 SM00862 Transcriptional regulatory protein, C terminal VPBB_A1534 SM00382 ATPases associated with a variety of cellular activities VPBB_A1537 SM01007 Class II Aldolase and Adducin N-terminal domain VPBB_A1540 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1544 SM00347 helix_turn_helix multiple antibiotic resistance protein VPBB_A1554 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VPBB_A1557 SM00829 Enoylreductase VPBB_A1558 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1560 SM00487 DEAD-like helicases superfamily VPBB_A1560 SM00490 helicase superfamily c-terminal domain VPBB_A1564 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1567 SM00382 ATPases associated with a variety of cellular activities VPBB_A1569 SM00344 helix_turn_helix ASNC type VPBB_A1578 SM00342 helix_turn_helix, arabinose operon control protein VPBB_A1579 SM00421 helix_turn_helix, Lux Regulon VPBB_A1580 SM00387 Histidine kinase-like ATPases VPBB_A1580 SM00388 His Kinase A (phosphoacceptor) domain VPBB_A1581 SM00448 cheY-homologous receiver domain VPBB_A1584 SM00052 Putative diguanylate phosphodiesterase VPBB_A1584 SM00267 diguanylate cyclase VPBB_A1585 SM00382 ATPases associated with a variety of cellular activities VPBB_A1599 SM00470 ParB-like nuclease domain