locus-tag class description VpaChn25_0001 PF00308 Bacterial dnaA protein VpaChn25_0001 PF08299 Bacterial dnaA protein helix-turn-helix VpaChn25_0001 PF11638 DnaA N-terminal domain VpaChn25_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain VpaChn25_0002 PF02767 DNA polymerase III beta subunit, central domain VpaChn25_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain VpaChn25_0003 PF02463 RecF/RecN/SMC N terminal domain VpaChn25_0004 PF01751 Toprim domain VpaChn25_0004 PF00204 DNA gyrase B VpaChn25_0004 PF00986 DNA gyrase B subunit, carboxyl terminus VpaChn25_0004 PF18053 DNA gyrase B subunit insert domain VpaChn25_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0007 PF00011 Hsp20/alpha crystallin family VpaChn25_0008 PF00155 Aminotransferase class I and II VpaChn25_0009 PF00128 Alpha amylase, catalytic domain VpaChn25_0010 PF02092 Glycyl-tRNA synthetase beta subunit VpaChn25_0010 PF05746 DALR anticodon binding domain VpaChn25_0011 PF02091 Glycyl-tRNA synthetase alpha subunit VpaChn25_0013 PF01169 Uncharacterized protein family UPF0016 VpaChn25_0015 PF01206 Sulfurtransferase TusA VpaChn25_0017 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0017 PF03466 LysR substrate binding domain VpaChn25_0018 PF00107 Zinc-binding dehydrogenase VpaChn25_0018 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_0019 PF00108 Thiolase, N-terminal domain VpaChn25_0019 PF02803 Thiolase, C-terminal domain VpaChn25_0020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VpaChn25_0020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VpaChn25_0020 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_0021 PF01205 Uncharacterized protein family UPF0029 VpaChn25_0021 PF09186 Domain of unknown function (DUF1949) VpaChn25_0022 PF02386 Cation transport protein VpaChn25_0023 PF12724 Flavodoxin domain VpaChn25_0025 PF03466 LysR substrate binding domain VpaChn25_0025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0026 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VpaChn25_0026 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VpaChn25_0027 PF04380 Membrane fusogenic activity VpaChn25_0028 PF00873 AcrB/AcrD/AcrF family VpaChn25_0029 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_0030 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_0030 PF16295 Tetracyclin repressor-like, C-terminal domain VpaChn25_0031 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_0031 PF13361 UvrD-like helicase C-terminal domain VpaChn25_0032 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VpaChn25_0033 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_0034 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_0034 PF00005 ABC transporter VpaChn25_0035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_0037 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_0037 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0044 PF00069 Protein kinase domain VpaChn25_0045 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_0045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VpaChn25_0046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0046 PF03466 LysR substrate binding domain VpaChn25_0047 PF00893 Small Multidrug Resistance protein VpaChn25_0048 PF00893 Small Multidrug Resistance protein VpaChn25_0049 PF00920 Dehydratase family VpaChn25_0050 PF01202 Shikimate kinase VpaChn25_0051 PF02447 GntP family permease VpaChn25_0052 PF01081 KDPG and KHG aldolase VpaChn25_0053 PF01048 Phosphorylase superfamily VpaChn25_0054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0054 PF03466 LysR substrate binding domain VpaChn25_0055 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_0055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VpaChn25_0056 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VpaChn25_0057 PF01432 Peptidase family M3 VpaChn25_0058 PF01037 Lrp/AsnC ligand binding domain VpaChn25_0059 PF00563 EAL domain VpaChn25_0059 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0059 PF08448 PAS fold VpaChn25_0060 PF04445 Putative SAM-dependent methyltransferase VpaChn25_0062 PF00892 EamA-like transporter family VpaChn25_0063 PF00582 Universal stress protein family VpaChn25_0064 PF00210 Ferritin-like domain VpaChn25_0065 PF10625 Universal stress protein B (UspB) VpaChn25_0067 PF01590 GAF domain VpaChn25_0067 PF02954 Bacterial regulatory protein, Fis family VpaChn25_0067 PF00158 Sigma-54 interaction domain VpaChn25_0068 PF04972 BON domain VpaChn25_0071 PF00781 Diacylglycerol kinase catalytic domain VpaChn25_0077 PF01594 AI-2E family transporter VpaChn25_0078 PF00563 EAL domain VpaChn25_0078 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_0078 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0080 PF02646 RmuC family VpaChn25_0081 PF01209 ubiE/COQ5 methyltransferase family VpaChn25_0082 PF02036 SCP-2 sterol transfer family VpaChn25_0083 PF03109 ABC1 family VpaChn25_0084 PF02416 mttA/Hcf106 family VpaChn25_0085 PF02416 mttA/Hcf106 family VpaChn25_0086 PF00902 Sec-independent protein translocase protein (TatC) VpaChn25_0088 PF01026 TatD related DNase VpaChn25_0089 PF00490 Delta-aminolevulinic acid dehydratase VpaChn25_0091 PF00476 DNA polymerase family A VpaChn25_0091 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VpaChn25_0091 PF01367 5'-3' exonuclease, C-terminal SAM fold VpaChn25_0091 PF01612 3'-5' exonuclease VpaChn25_0092 PF01926 50S ribosome-binding GTPase VpaChn25_0093 PF00034 Cytochrome c VpaChn25_0096 PF04220 Der GTPase activator (YihI) VpaChn25_0097 PF10675 Protein of unknown function (DUF2489) VpaChn25_0098 PF04055 Radical SAM superfamily VpaChn25_0098 PF06969 HemN C-terminal domain VpaChn25_0099 PF00962 Adenosine/AMP deaminase VpaChn25_0100 PF00563 EAL domain VpaChn25_0100 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0100 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_0101 PF02954 Bacterial regulatory protein, Fis family VpaChn25_0101 PF00072 Response regulator receiver domain VpaChn25_0101 PF00158 Sigma-54 interaction domain VpaChn25_0102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0102 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0102 PF00989 PAS fold VpaChn25_0104 PF00120 Glutamine synthetase, catalytic domain VpaChn25_0104 PF03951 Glutamine synthetase, beta-Grasp domain VpaChn25_0108 PF03631 Virulence factor BrkB VpaChn25_0109 PF02580 D-Tyr-tRNA(Tyr) deacylase VpaChn25_0110 PF09500 Putative thioesterase (yiiD_Cterm) VpaChn25_0110 PF00583 Acetyltransferase (GNAT) family VpaChn25_0112 PF01293 Phosphoenolpyruvate carboxykinase VpaChn25_0113 PF01430 Hsp33 protein VpaChn25_0114 PF01479 S4 domain VpaChn25_0115 PF11356 Type II secretion system protein C VpaChn25_0116 PF03958 Bacterial type II/III secretion system short domain VpaChn25_0116 PF00263 Bacterial type II and III secretion system protein VpaChn25_0117 PF00437 Type II/IV secretion system protein VpaChn25_0118 PF00482 Type II secretion system (T2SS), protein F VpaChn25_0119 PF08334 Type II secretion system (T2SS), protein G VpaChn25_0119 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_0120 PF12019 Type II transport protein GspH VpaChn25_0121 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_0121 PF02501 Type II secretion system (T2SS), protein I VpaChn25_0122 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_0122 PF11612 Type II secretion system (T2SS), protein J VpaChn25_0123 PF03934 Type II secretion system (T2SS), protein K VpaChn25_0124 PF05134 Type II secretion system (T2SS), protein L VpaChn25_0124 PF12693 GspL periplasmic domain VpaChn25_0125 PF04612 Type II secretion system (T2SS), protein M VpaChn25_0126 PF01203 Type II secretion system (T2SS), protein N VpaChn25_0127 PF00459 Inositol monophosphatase family VpaChn25_0128 PF00293 NUDIX domain VpaChn25_0129 PF01106 NifU-like domain VpaChn25_0129 PF01521 Iron-sulphur cluster biosynthesis VpaChn25_0130 PF00156 Phosphoribosyl transferase domain VpaChn25_0131 PF00561 alpha/beta hydrolase fold VpaChn25_0133 PF16921 Tex protein YqgF-like domain VpaChn25_0133 PF09371 Tex-like protein N-terminal domain VpaChn25_0133 PF00575 S1 RNA binding domain VpaChn25_0133 PF17674 HHH domain VpaChn25_0135 PF03449 Transcription elongation factor, N-terminal VpaChn25_0135 PF01272 Transcription elongation factor, GreA/GreB, C-term VpaChn25_0137 PF00072 Response regulator receiver domain VpaChn25_0137 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_0138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0138 PF00672 HAMP domain VpaChn25_0138 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0140 PF00270 DEAD/DEAH box helicase VpaChn25_0140 PF00271 Helicase conserved C-terminal domain VpaChn25_0140 PF17191 RecG wedge domain VpaChn25_0141 PF00588 SpoU rRNA Methylase family VpaChn25_0141 PF12105 SpoU, rRNA methylase, C-terminal VpaChn25_0142 PF04607 Region found in RelA / SpoT proteins VpaChn25_0142 PF02824 TGS domain VpaChn25_0142 PF13291 ACT domain VpaChn25_0143 PF01192 RNA polymerase Rpb6 VpaChn25_0144 PF00625 Guanylate kinase VpaChn25_0147 PF02472 Biopolymer transport protein ExbD/TolR VpaChn25_0148 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_0151 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_0151 PF00593 TonB dependent receptor VpaChn25_0152 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0153 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_0153 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0154 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_0155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_0155 PF00005 ABC transporter VpaChn25_0156 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_0156 PF00005 ABC transporter VpaChn25_0158 PF05970 PIF1-like helicase VpaChn25_0158 PF02689 Helicase VpaChn25_0164 PF18272 single-stranded DNA binding TraI N-terminal subdomain VpaChn25_0164 PF18340 DNA relaxase TraI 2B/2B-like domain VpaChn25_0164 PF07057 DNA helicase TraI VpaChn25_0164 PF08751 TrwC relaxase VpaChn25_0173 PF03755 YicC-like family, N-terminal region VpaChn25_0173 PF08340 Domain of unknown function (DUF1732) VpaChn25_0174 PF03725 3' exoribonuclease family, domain 2 VpaChn25_0174 PF01138 3' exoribonuclease family, domain 1 VpaChn25_0175 PF00156 Phosphoribosyl transferase domain VpaChn25_0176 PF03279 Bacterial lipid A biosynthesis acyltransferase VpaChn25_0177 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_0178 PF02441 Flavoprotein VpaChn25_0178 PF04127 DNA / pantothenate metabolism flavoprotein VpaChn25_0179 PF00672 HAMP domain VpaChn25_0179 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_0179 PF17200 Single Cache domain 2 VpaChn25_0180 PF04002 RadC-like JAB domain VpaChn25_0181 PF00830 Ribosomal L28 family VpaChn25_0182 PF00471 Ribosomal protein L33 VpaChn25_0184 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VpaChn25_0184 PF06827 Zinc finger found in FPG and IleRS VpaChn25_0184 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VpaChn25_0185 PF05686 Glycosyl transferase family 90 VpaChn25_0186 PF00535 Glycosyl transferase family 2 VpaChn25_0187 PF00535 Glycosyl transferase family 2 VpaChn25_0188 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VpaChn25_0189 PF01219 Prokaryotic diacylglycerol kinase VpaChn25_0191 PF16363 GDP-mannose 4,6 dehydratase VpaChn25_0192 PF00483 Nucleotidyl transferase VpaChn25_0194 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VpaChn25_0196 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VpaChn25_0196 PF00534 Glycosyl transferases group 1 VpaChn25_0197 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VpaChn25_0198 PF03279 Bacterial lipid A biosynthesis acyltransferase VpaChn25_0199 PF01370 NAD dependent epimerase/dehydratase family VpaChn25_0200 PF06082 Exopolysaccharide biosynthesis protein YbjH VpaChn25_0202 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VpaChn25_0205 PF02350 UDP-N-acetylglucosamine 2-epimerase VpaChn25_0206 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VpaChn25_0206 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VpaChn25_0206 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VpaChn25_0207 PF02719 Polysaccharide biosynthesis protein VpaChn25_0208 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VpaChn25_0209 PF02350 UDP-N-acetylglucosamine 2-epimerase VpaChn25_0210 PF03102 NeuB family VpaChn25_0210 PF08666 SAF domain VpaChn25_0212 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_0212 PF00483 Nucleotidyl transferase VpaChn25_0213 PF02348 Cytidylyltransferase VpaChn25_0214 PF01168 Alanine racemase, N-terminal domain VpaChn25_0214 PF00842 Alanine racemase, C-terminal domain VpaChn25_0215 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_0215 PF12464 Maltose acetyltransferase VpaChn25_0215 PF14602 Hexapeptide repeat of succinyl-transferase VpaChn25_0216 PF03808 Glycosyl transferase WecB/TagA/CpsF family VpaChn25_0218 PF00953 Glycosyl transferase family 4 VpaChn25_0219 PF10996 Beta-Casp domain VpaChn25_0219 PF00753 Metallo-beta-lactamase superfamily VpaChn25_0219 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VpaChn25_0220 PF02350 UDP-N-acetylglucosamine 2-epimerase VpaChn25_0221 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VpaChn25_0221 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VpaChn25_0221 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VpaChn25_0224 PF02397 Bacterial sugar transferase VpaChn25_0226 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VpaChn25_0227 PF02719 Polysaccharide biosynthesis protein VpaChn25_0229 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VpaChn25_0229 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VpaChn25_0229 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VpaChn25_0230 PF00121 Triosephosphate isomerase VpaChn25_0234 PF08220 DeoR-like helix-turn-helix domain VpaChn25_0234 PF00455 DeoR C terminal sensor domain VpaChn25_0235 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VpaChn25_0238 PF06005 Cell division protein ZapB VpaChn25_0239 PF03737 Aldolase/RraA VpaChn25_0240 PF01040 UbiA prenyltransferase family VpaChn25_0241 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_0241 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_0242 PF00227 Proteasome subunit VpaChn25_0244 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_0245 PF00271 Helicase conserved C-terminal domain VpaChn25_0245 PF17764 3′ DNA-binding domain (3′BD) VpaChn25_0245 PF18074 Primosomal protein N C-terminal domain VpaChn25_0245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VpaChn25_0245 PF00270 DEAD/DEAH box helicase VpaChn25_0246 PF01197 Ribosomal protein L31 VpaChn25_0247 PF00338 Ribosomal protein S10p/S20e VpaChn25_0248 PF00297 Ribosomal protein L3 VpaChn25_0249 PF00573 Ribosomal protein L4/L1 family VpaChn25_0250 PF00276 Ribosomal protein L23 VpaChn25_0251 PF03947 Ribosomal Proteins L2, C-terminal domain VpaChn25_0251 PF00181 Ribosomal Proteins L2, RNA binding domain VpaChn25_0252 PF00203 Ribosomal protein S19 VpaChn25_0253 PF00237 Ribosomal protein L22p/L17e VpaChn25_0254 PF07650 KH domain VpaChn25_0254 PF00189 Ribosomal protein S3, C-terminal domain VpaChn25_0255 PF00252 Ribosomal protein L16p/L10e VpaChn25_0256 PF00831 Ribosomal L29 protein VpaChn25_0257 PF00366 Ribosomal protein S17 VpaChn25_0258 PF00238 Ribosomal protein L14p/L23e VpaChn25_0259 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VpaChn25_0259 PF00467 KOW motif VpaChn25_0260 PF00281 Ribosomal protein L5 VpaChn25_0260 PF00673 ribosomal L5P family C-terminus VpaChn25_0261 PF00253 Ribosomal protein S14p/S29e VpaChn25_0262 PF00410 Ribosomal protein S8 VpaChn25_0263 PF00347 Ribosomal protein L6 VpaChn25_0264 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VpaChn25_0265 PF03719 Ribosomal protein S5, C-terminal domain VpaChn25_0265 PF00333 Ribosomal protein S5, N-terminal domain VpaChn25_0266 PF00327 Ribosomal protein L30p/L7e VpaChn25_0267 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VpaChn25_0268 PF00344 SecY translocase VpaChn25_0269 PF00444 Ribosomal protein L36 VpaChn25_0270 PF00416 Ribosomal protein S13/S18 VpaChn25_0271 PF00411 Ribosomal protein S11 VpaChn25_0272 PF01479 S4 domain VpaChn25_0272 PF00163 Ribosomal protein S4/S9 N-terminal domain VpaChn25_0273 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VpaChn25_0273 PF01000 RNA polymerase Rpb3/RpoA insert domain VpaChn25_0273 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VpaChn25_0274 PF01196 Ribosomal protein L17 VpaChn25_0276 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VpaChn25_0276 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_0279 PF13673 Acetyltransferase (GNAT) domain VpaChn25_0280 PF03880 DbpA RNA binding domain VpaChn25_0280 PF00270 DEAD/DEAH box helicase VpaChn25_0280 PF00271 Helicase conserved C-terminal domain VpaChn25_0282 PF02872 5'-nucleotidase, C-terminal domain VpaChn25_0282 PF00149 Calcineurin-like phosphoesterase VpaChn25_0283 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VpaChn25_0283 PF14824 Sirohaem biosynthesis protein central VpaChn25_0283 PF10414 Sirohaem synthase dimerisation region VpaChn25_0284 PF01507 Phosphoadenosine phosphosulfate reductase family VpaChn25_0285 PF00009 Elongation factor Tu GTP binding domain VpaChn25_0286 PF02080 TrkA-C domain VpaChn25_0286 PF03600 Citrate transporter VpaChn25_0291 PF00005 ABC transporter VpaChn25_0294 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VpaChn25_0295 PF06526 Protein of unknown function (DUF1107) VpaChn25_0296 PF01625 Peptide methionine sulfoxide reductase VpaChn25_0297 PF17243 POTRA domain TamA domain 1 VpaChn25_0297 PF01103 Surface antigen VpaChn25_0298 PF04357 TamB, inner membrane protein subunit of TAM complex VpaChn25_0299 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VpaChn25_0301 PF00719 Inorganic pyrophosphatase VpaChn25_0302 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VpaChn25_0303 PF01225 Mur ligase family, catalytic domain VpaChn25_0303 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_0303 PF08245 Mur ligase middle domain VpaChn25_0304 PF02441 Flavoprotein VpaChn25_0306 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0307 PF00005 ABC transporter VpaChn25_0311 PF16868 NMT1-like family VpaChn25_0312 PF02863 Arginine repressor, C-terminal domain VpaChn25_0312 PF01316 Arginine repressor, DNA binding domain VpaChn25_0313 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VpaChn25_0313 PF00056 lactate/malate dehydrogenase, NAD binding domain VpaChn25_0315 PF00348 Polyprenyl synthetase VpaChn25_0316 PF00829 Ribosomal prokaryotic L21 protein VpaChn25_0317 PF01016 Ribosomal L27 protein VpaChn25_0318 PF01926 50S ribosome-binding GTPase VpaChn25_0318 PF01018 GTP1/OBG VpaChn25_0319 PF06738 Putative threonine/serine exporter VpaChn25_0320 PF12821 Threonine/Serine exporter, ThrE VpaChn25_0321 PF00186 Dihydrofolate reductase VpaChn25_0322 PF00149 Calcineurin-like phosphoesterase VpaChn25_0323 PF04379 ApaG domain VpaChn25_0324 PF00398 Ribosomal RNA adenine dimethylase VpaChn25_0325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VpaChn25_0326 PF09312 SurA N-terminal domain VpaChn25_0327 PF03968 OstA-like protein VpaChn25_0327 PF04453 LPS transport system D VpaChn25_0328 PF00226 DnaJ domain VpaChn25_0328 PF05099 Tellurite resistance protein TerB VpaChn25_0330 PF00694 Aconitase C-terminal domain VpaChn25_0331 PF00330 Aconitase family (aconitate hydratase) VpaChn25_0332 PF00180 Isocitrate/isopropylmalate dehydrogenase VpaChn25_0333 PF00682 HMGL-like VpaChn25_0333 PF08502 LeuA allosteric (dimerisation) domain VpaChn25_0335 PF01569 PAP2 superfamily VpaChn25_0337 PF03466 LysR substrate binding domain VpaChn25_0337 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0338 PF00501 AMP-binding enzyme VpaChn25_0339 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VpaChn25_0339 PF00205 Thiamine pyrophosphate enzyme, central domain VpaChn25_0339 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VpaChn25_0340 PF10369 Small subunit of acetolactate synthase VpaChn25_0341 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0341 PF07694 5TMR of 5TMR-LYT VpaChn25_0343 PF00224 Pyruvate kinase, barrel domain VpaChn25_0343 PF02887 Pyruvate kinase, alpha/beta domain VpaChn25_0344 PF00455 DeoR C terminal sensor domain VpaChn25_0344 PF08220 DeoR-like helix-turn-helix domain VpaChn25_0345 PF01380 SIS domain VpaChn25_0347 PF00072 Response regulator receiver domain VpaChn25_0347 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_0348 PF00672 HAMP domain VpaChn25_0348 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0349 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_0350 PF02733 Dak1 domain VpaChn25_0351 PF02734 DAK2 domain VpaChn25_0352 PF00391 PEP-utilising enzyme, mobile domain VpaChn25_0352 PF02896 PEP-utilising enzyme, TIM barrel domain VpaChn25_0352 PF05524 PEP-utilising enzyme, N-terminal VpaChn25_0353 PF00158 Sigma-54 interaction domain VpaChn25_0353 PF02954 Bacterial regulatory protein, Fis family VpaChn25_0353 PF00989 PAS fold VpaChn25_0354 PF05068 Mannitol repressor VpaChn25_0355 PF08125 Mannitol dehydrogenase C-terminal domain VpaChn25_0355 PF01232 Mannitol dehydrogenase Rossmann domain VpaChn25_0356 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_0356 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VpaChn25_0356 PF02378 Phosphotransferase system, EIIC VpaChn25_0363 PF03180 NLPA lipoprotein VpaChn25_0364 PF04545 Sigma-70, region 4 VpaChn25_0364 PF04542 Sigma-70 region 2 VpaChn25_0364 PF00140 Sigma-70 factor, region 1.2 VpaChn25_0364 PF03979 Sigma-70 factor, region 1.1 VpaChn25_0364 PF04546 Sigma-70, non-essential region VpaChn25_0364 PF04539 Sigma-70 region 3 VpaChn25_0365 PF10410 DnaB-helicase binding domain of primase VpaChn25_0365 PF08278 DNA primase DnaG DnaB-binding VpaChn25_0365 PF08275 DNA primase catalytic core, N-terminal domain VpaChn25_0365 PF01807 CHC2 zinc finger VpaChn25_0366 PF09424 Yqey-like protein VpaChn25_0367 PF01165 Ribosomal protein S21 VpaChn25_0368 PF00814 Glycoprotease family VpaChn25_0369 PF12697 Alpha/beta hydrolase family VpaChn25_0370 PF02660 Glycerol-3-phosphate acyltransferase VpaChn25_0371 PF02152 Dihydroneopterin aldolase VpaChn25_0372 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VpaChn25_0373 PF02673 Bacitracin resistance protein BacA VpaChn25_0374 PF01966 HD domain VpaChn25_0374 PF01743 Poly A polymerase head domain VpaChn25_0374 PF12627 Probable RNA and SrmB- binding site of polymerase A VpaChn25_0375 PF13401 AAA domain VpaChn25_0375 PF01471 Putative peptidoglycan binding domain VpaChn25_0377 PF08239 Bacterial SH3 domain VpaChn25_0378 PF01384 Phosphate transporter family VpaChn25_0379 PF01865 Protein of unknown function DUF47 VpaChn25_0380 PF01928 CYTH domain VpaChn25_0382 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_0382 PF00672 HAMP domain VpaChn25_0383 PF08335 GlnD PII-uridylyltransferase VpaChn25_0383 PF03710 Glutamate-ammonia ligase adenylyltransferase VpaChn25_0384 PF00294 pfkB family carbohydrate kinase VpaChn25_0384 PF01467 Cytidylyltransferase-like VpaChn25_0385 PF02321 Outer membrane efflux protein VpaChn25_0386 PF00293 NUDIX domain VpaChn25_0387 PF06853 Protein of unknown function (DUF1249) VpaChn25_0388 PF00149 Calcineurin-like phosphoesterase VpaChn25_0389 PF05728 Uncharacterised protein family (UPF0227) VpaChn25_0390 PF01751 Toprim domain VpaChn25_0390 PF00204 DNA gyrase B VpaChn25_0390 PF00986 DNA gyrase B subunit, carboxyl terminus VpaChn25_0390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0391 PF00521 DNA gyrase/topoisomerase IV, subunit A VpaChn25_0391 PF03989 DNA gyrase C-terminal domain, beta-propeller VpaChn25_0392 PF13180 PDZ domain VpaChn25_0393 PF00595 PDZ domain VpaChn25_0395 PF06295 Protein of unknown function (DUF1043) VpaChn25_0396 PF03969 AFG1-like ATPase VpaChn25_0397 PF00572 Ribosomal protein L13 VpaChn25_0398 PF00380 Ribosomal protein S9/S16 VpaChn25_0399 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VpaChn25_0399 PF00355 Rieske [2Fe-2S] domain VpaChn25_0400 PF00033 Cytochrome b/b6/petB VpaChn25_0400 PF00032 Cytochrome b(C-terminal)/b6/petD VpaChn25_0401 PF02167 Cytochrome C1 family VpaChn25_0402 PF02798 Glutathione S-transferase, N-terminal domain VpaChn25_0402 PF00043 Glutathione S-transferase, C-terminal domain VpaChn25_0403 PF04386 Stringent starvation protein B VpaChn25_0404 PF04972 BON domain VpaChn25_0405 PF13580 SIS domain VpaChn25_0406 PF02021 Uncharacterised protein family UPF0102 VpaChn25_0407 PF04348 LppC putative lipoprotein VpaChn25_0408 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VpaChn25_0409 PF01795 MraW methylase family VpaChn25_0410 PF04999 Cell division protein FtsL VpaChn25_0411 PF00905 Penicillin binding protein transpeptidase domain VpaChn25_0411 PF03717 Penicillin-binding Protein dimerisation domain VpaChn25_0412 PF01225 Mur ligase family, catalytic domain VpaChn25_0412 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_0412 PF08245 Mur ligase middle domain VpaChn25_0413 PF08245 Mur ligase middle domain VpaChn25_0413 PF01225 Mur ligase family, catalytic domain VpaChn25_0413 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_0414 PF00953 Glycosyl transferase family 4 VpaChn25_0414 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VpaChn25_0415 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_0415 PF08245 Mur ligase middle domain VpaChn25_0416 PF01098 Cell cycle protein VpaChn25_0417 PF04101 Glycosyltransferase family 28 C-terminal domain VpaChn25_0417 PF03033 Glycosyltransferase family 28 N-terminal domain VpaChn25_0418 PF01225 Mur ligase family, catalytic domain VpaChn25_0418 PF08245 Mur ligase middle domain VpaChn25_0418 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_0419 PF03799 Cell division protein FtsQ VpaChn25_0419 PF08478 POTRA domain, FtsQ-type VpaChn25_0420 PF02491 SHS2 domain inserted in FTSA VpaChn25_0421 PF00091 Tubulin/FtsZ family, GTPase domain VpaChn25_0421 PF12327 FtsZ family, C-terminal domain VpaChn25_0422 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VpaChn25_0424 PF01043 SecA preprotein cross-linking domain VpaChn25_0424 PF02810 SEC-C motif VpaChn25_0424 PF07516 SecA Wing and Scaffold domain VpaChn25_0424 PF07517 SecA DEAD-like domain VpaChn25_0425 PF00293 NUDIX domain VpaChn25_0426 PF05173 Dihydrodipicolinate reductase, C-terminus VpaChn25_0426 PF01113 Dihydrodipicolinate reductase, N-terminus VpaChn25_0427 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VpaChn25_0427 PF00117 Glutamine amidotransferase class-I VpaChn25_0428 PF02142 MGS-like domain VpaChn25_0428 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VpaChn25_0428 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VpaChn25_0430 PF01925 Sulfite exporter TauE/SafE VpaChn25_0431 PF03458 UPF0126 domain VpaChn25_0432 PF01497 Periplasmic binding protein VpaChn25_0433 PF17113 Regulatory signalling modulator protein AmpE VpaChn25_0433 PF03186 CobD/Cbib protein VpaChn25_0434 PF01048 Phosphorylase superfamily VpaChn25_0436 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VpaChn25_0436 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_0437 PF04898 Glutamate synthase central domain VpaChn25_0437 PF01645 Conserved region in glutamate synthase VpaChn25_0437 PF01493 GXGXG motif VpaChn25_0437 PF00310 Glutamine amidotransferases class-II VpaChn25_0438 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VpaChn25_0438 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_0439 PF01645 Conserved region in glutamate synthase VpaChn25_0439 PF00310 Glutamine amidotransferases class-II VpaChn25_0439 PF04898 Glutamate synthase central domain VpaChn25_0439 PF01493 GXGXG motif VpaChn25_0440 PF04055 Radical SAM superfamily VpaChn25_0440 PF16199 Radical_SAM C-terminal domain VpaChn25_0441 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0441 PF01590 GAF domain VpaChn25_0441 PF00563 EAL domain VpaChn25_0441 PF00360 Phytochrome region VpaChn25_0442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0442 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0442 PF18415 Histidine kinase receptor ArcB trans-membrane domain VpaChn25_0442 PF01627 Hpt domain VpaChn25_0442 PF00989 PAS fold VpaChn25_0442 PF00072 Response regulator receiver domain VpaChn25_0444 PF00072 Response regulator receiver domain VpaChn25_0444 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_0446 PF03737 Aldolase/RraA VpaChn25_0448 PF00742 Homoserine dehydrogenase VpaChn25_0448 PF03447 Homoserine dehydrogenase, NAD binding domain VpaChn25_0448 PF13840 ACT domain VpaChn25_0448 PF01842 ACT domain VpaChn25_0448 PF00696 Amino acid kinase family VpaChn25_0449 PF00288 GHMP kinases N terminal domain VpaChn25_0449 PF08544 GHMP kinases C terminal VpaChn25_0450 PF14821 Threonine synthase N terminus VpaChn25_0450 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_0451 PF01228 Glycine radical VpaChn25_0452 PF01261 Xylose isomerase-like TIM barrel VpaChn25_0453 PF03167 Uracil DNA glycosylase superfamily VpaChn25_0456 PF01235 Sodium:alanine symporter family VpaChn25_0457 PF03883 Peroxide stress protein YaaA VpaChn25_0458 PF00271 Helicase conserved C-terminal domain VpaChn25_0458 PF00270 DEAD/DEAH box helicase VpaChn25_0459 PF05175 Methyltransferase small domain VpaChn25_0460 PF05525 Branched-chain amino acid transport protein VpaChn25_0461 PF00258 Flavodoxin VpaChn25_0462 PF00589 Phage integrase family VpaChn25_0462 PF02899 Phage integrase, N-terminal SAM-like domain VpaChn25_0463 PF10411 Disulfide bond isomerase protein N-terminus VpaChn25_0463 PF13098 Thioredoxin-like domain VpaChn25_0464 PF01368 DHH family VpaChn25_0464 PF02272 DHHA1 domain VpaChn25_0464 PF17768 RecJ OB domain VpaChn25_0465 PF03462 PCRF domain VpaChn25_0465 PF00472 RF-1 domain VpaChn25_0466 PF01336 OB-fold nucleic acid binding domain VpaChn25_0466 PF00152 tRNA synthetases class II (D, K and N) VpaChn25_0467 PF02954 Bacterial regulatory protein, Fis family VpaChn25_0467 PF00072 Response regulator receiver domain VpaChn25_0467 PF00158 Sigma-54 interaction domain VpaChn25_0469 PF00248 Aldo/keto reductase family VpaChn25_0471 PF02976 DNA mismatch repair enzyme MutH VpaChn25_0472 PF00293 NUDIX domain VpaChn25_0473 PF02896 PEP-utilising enzyme, TIM barrel domain VpaChn25_0473 PF01590 GAF domain VpaChn25_0473 PF00391 PEP-utilising enzyme, mobile domain VpaChn25_0473 PF05524 PEP-utilising enzyme, N-terminal VpaChn25_0474 PF01925 Sulfite exporter TauE/SafE VpaChn25_0475 PF01790 Prolipoprotein diacylglyceryl transferase VpaChn25_0476 PF00303 Thymidylate synthase VpaChn25_0478 PF02690 Na+/Pi-cotransporter VpaChn25_0479 PF03466 LysR substrate binding domain VpaChn25_0479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0480 PF01022 Bacterial regulatory protein, arsR family VpaChn25_0481 PF01649 Ribosomal protein S20 VpaChn25_0482 PF03023 Lipid II flippase MurJ VpaChn25_0483 PF06574 FAD synthetase VpaChn25_0483 PF01687 Riboflavin kinase VpaChn25_0484 PF00133 tRNA synthetases class I (I, L, M and V) VpaChn25_0484 PF08264 Anticodon-binding domain of tRNA VpaChn25_0484 PF06827 Zinc finger found in FPG and IleRS VpaChn25_0485 PF01252 Signal peptidase (SPase) II VpaChn25_0486 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_0487 PF02401 LytB protein VpaChn25_0488 PF00072 Response regulator receiver domain VpaChn25_0488 PF04397 LytTr DNA-binding domain VpaChn25_0489 PF06580 Histidine kinase VpaChn25_0489 PF07694 5TMR of 5TMR-LYT VpaChn25_0490 PF02554 Carbon starvation protein CstA VpaChn25_0493 PF13580 SIS domain VpaChn25_0494 PF03702 Anhydro-N-acetylmuramic acid kinase VpaChn25_0495 PF00933 Glycosyl hydrolase family 3 N terminal domain VpaChn25_0496 PF00793 DAHP synthetase I family VpaChn25_0497 PF01817 Chorismate mutase type II VpaChn25_0497 PF02153 Prephenate dehydrogenase VpaChn25_0498 PF04225 Opacity-associated protein A LysM-like domain VpaChn25_0498 PF01551 Peptidase family M23 VpaChn25_0499 PF07238 PilZ domain VpaChn25_0500 PF12848 ABC transporter VpaChn25_0500 PF00005 ABC transporter VpaChn25_0501 PF14718 Soluble lytic murein transglycosylase L domain VpaChn25_0501 PF01464 Transglycosylase SLT domain VpaChn25_0502 PF01371 Trp repressor protein VpaChn25_0503 PF01931 Protein of unknown function DUF84 VpaChn25_0504 PF00800 Prephenate dehydratase VpaChn25_0504 PF01817 Chorismate mutase type II VpaChn25_0505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VpaChn25_0506 PF01464 Transglycosylase SLT domain VpaChn25_0507 PF13525 Outer membrane lipoprotein VpaChn25_0508 PF00849 RNA pseudouridylate synthase VpaChn25_0508 PF01479 S4 domain VpaChn25_0510 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_0510 PF02861 Clp amino terminal domain, pathogenicity island component VpaChn25_0510 PF10431 C-terminal, D2-small domain, of ClpB protein VpaChn25_0510 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_0510 PF17871 AAA lid domain VpaChn25_0514 PF03411 Penicillin-insensitive murein endopeptidase VpaChn25_0516 PF00037 4Fe-4S binding domain VpaChn25_0518 PF04381 Putative exonuclease, RdgC VpaChn25_0519 PF00072 Response regulator receiver domain VpaChn25_0519 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_0520 PF00989 PAS fold VpaChn25_0520 PF11808 Phosphate regulon sensor protein PhoR VpaChn25_0520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0520 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0521 PF12849 PBP superfamily domain VpaChn25_0522 PF02541 Ppx/GppA phosphatase family VpaChn25_0523 PF02503 Polyphosphate kinase middle domain VpaChn25_0523 PF13090 Polyphosphate kinase C-terminal domain 2 VpaChn25_0523 PF17941 Polyphosphate kinase C-terminal domain 1 VpaChn25_0523 PF13089 Polyphosphate kinase N-terminal domain VpaChn25_0524 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0525 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0526 PF00005 ABC transporter VpaChn25_0527 PF01895 PhoU domain VpaChn25_0528 PF03976 Polyphosphate kinase 2 (PPK2) VpaChn25_0529 PF03932 CutC family VpaChn25_0530 PF10417 C-terminal domain of 1-Cys peroxiredoxin VpaChn25_0530 PF00578 AhpC/TSA family VpaChn25_0531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0531 PF03466 LysR substrate binding domain VpaChn25_0532 PF01274 Malate synthase VpaChn25_0533 PF00463 Isocitrate lyase family VpaChn25_0534 PF00571 CBS domain VpaChn25_0536 PF02547 Queuosine biosynthesis protein VpaChn25_0537 PF01702 Queuine tRNA-ribosyltransferase VpaChn25_0538 PF02699 Preprotein translocase subunit VpaChn25_0539 PF02355 Protein export membrane protein VpaChn25_0539 PF13721 SecD export protein N-terminal TM region VpaChn25_0539 PF07549 SecD/SecF GG Motif VpaChn25_0540 PF07549 SecD/SecF GG Motif VpaChn25_0540 PF02355 Protein export membrane protein VpaChn25_0541 PF00459 Inositol monophosphatase family VpaChn25_0542 PF00588 SpoU rRNA Methylase family VpaChn25_0543 PF02082 Transcriptional regulator VpaChn25_0544 PF00266 Aminotransferase class-V VpaChn25_0545 PF01592 NifU-like N terminal domain VpaChn25_0546 PF01521 Iron-sulphur cluster biosynthesis VpaChn25_0547 PF07743 HSCB C-terminal oligomerisation domain VpaChn25_0547 PF00226 DnaJ domain VpaChn25_0548 PF00012 Hsp70 protein VpaChn25_0549 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_0550 PF04384 Iron-sulphur cluster assembly VpaChn25_0551 PF12404 Peptidase VpaChn25_0551 PF00883 Cytosol aminopeptidase family, catalytic domain VpaChn25_0552 PF00334 Nucleoside diphosphate kinase VpaChn25_0553 PF04055 Radical SAM superfamily VpaChn25_0554 PF13464 Domain of unknown function (DUF4115) VpaChn25_0555 PF04551 GcpE protein VpaChn25_0556 PF13393 Histidyl-tRNA synthetase VpaChn25_0556 PF03129 Anticodon binding domain VpaChn25_0557 PF09976 Tetratricopeptide repeat-like domain VpaChn25_0558 PF13360 PQQ-like domain VpaChn25_0559 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VpaChn25_0559 PF01926 50S ribosome-binding GTPase VpaChn25_0562 PF02601 Exonuclease VII, large subunit VpaChn25_0562 PF13742 OB-fold nucleic acid binding domain VpaChn25_0563 PF00571 CBS domain VpaChn25_0563 PF00478 IMP dehydrogenase / GMP reductase domain VpaChn25_0564 PF00958 GMP synthase C terminal domain VpaChn25_0564 PF00117 Glutamine amidotransferase class-I VpaChn25_0564 PF02540 NAD synthase VpaChn25_0565 PF03553 Na+/H+ antiporter family VpaChn25_0566 PF00704 Glycosyl hydrolases family 18 VpaChn25_0566 PF06483 Chitinase C VpaChn25_0567 PF01184 GPR1/FUN34/yaaH family VpaChn25_0569 PF01235 Sodium:alanine symporter family VpaChn25_0570 PF01266 FAD dependent oxidoreductase VpaChn25_0571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0571 PF03466 LysR substrate binding domain VpaChn25_0574 PF07969 Amidohydrolase family VpaChn25_0576 PF01053 Cys/Met metabolism PLP-dependent enzyme VpaChn25_0577 PF00202 Aminotransferase class-III VpaChn25_0581 PF00795 Carbon-nitrogen hydrolase VpaChn25_0581 PF00583 Acetyltransferase (GNAT) family VpaChn25_0582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0582 PF03466 LysR substrate binding domain VpaChn25_0592 PF00239 Resolvase, N terminal domain VpaChn25_0592 PF02796 Helix-turn-helix domain of resolvase VpaChn25_0595 PF02384 N-6 DNA Methylase VpaChn25_0595 PF12161 HsdM N-terminal domain VpaChn25_0598 PF04851 Type III restriction enzyme, res subunit VpaChn25_0598 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VpaChn25_0598 PF00271 Helicase conserved C-terminal domain VpaChn25_0598 PF08463 EcoEI R protein C-terminal VpaChn25_0601 PF13356 Arm DNA-binding domain VpaChn25_0601 PF00589 Phage integrase family VpaChn25_0602 PF01668 SmpB protein VpaChn25_0603 PF03364 Polyketide cyclase / dehydrase and lipid transport VpaChn25_0604 PF03658 RnfH family Ubiquitin VpaChn25_0605 PF04355 SmpA / OmlA family VpaChn25_0606 PF02463 RecF/RecN/SMC N terminal domain VpaChn25_0608 PF01513 ATP-NAD kinase VpaChn25_0609 PF01025 GrpE VpaChn25_0610 PF00375 Sodium:dicarboxylate symporter family VpaChn25_0611 PF00012 Hsp70 protein VpaChn25_0612 PF00226 DnaJ domain VpaChn25_0612 PF01556 DnaJ C terminal domain VpaChn25_0612 PF00684 DnaJ central domain VpaChn25_0613 PF00114 Pilin (bacterial filament) VpaChn25_0613 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_0614 PF00114 Pilin (bacterial filament) VpaChn25_0614 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_0619 PF03806 AbgT putative transporter family VpaChn25_0620 PF14437 MafB19-like deaminase VpaChn25_0622 PF01464 Transglycosylase SLT domain VpaChn25_0622 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_0623 PF02769 AIR synthase related protein, C-terminal domain VpaChn25_0623 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VpaChn25_0623 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VpaChn25_0628 PF07687 Peptidase dimerisation domain VpaChn25_0628 PF01546 Peptidase family M20/M25/M40 VpaChn25_0629 PF00860 Permease family VpaChn25_0630 PF00156 Phosphoribosyl transferase domain VpaChn25_0632 PF07417 Sigma factor-binding transcriptional regulator Crl VpaChn25_0633 PF00696 Amino acid kinase family VpaChn25_0633 PF01472 PUA domain VpaChn25_0634 PF00171 Aldehyde dehydrogenase family VpaChn25_0635 PF03477 ATP cone domain VpaChn25_0636 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VpaChn25_0636 PF01872 RibD C-terminal domain VpaChn25_0637 PF00677 Lumazine binding domain VpaChn25_0638 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VpaChn25_0638 PF00925 GTP cyclohydrolase II VpaChn25_0639 PF00885 6,7-dimethyl-8-ribityllumazine synthase VpaChn25_0640 PF01029 NusB family VpaChn25_0641 PF00586 AIR synthase related protein, N-terminal domain VpaChn25_0641 PF02769 AIR synthase related protein, C-terminal domain VpaChn25_0642 PF04608 Phosphatidylglycerophosphatase A VpaChn25_0643 PF02779 Transketolase, pyrimidine binding domain VpaChn25_0643 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VpaChn25_0643 PF02780 Transketolase, C-terminal domain VpaChn25_0644 PF00348 Polyprenyl synthetase VpaChn25_0645 PF02609 Exonuclease VII small subunit VpaChn25_0646 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_0647 PF00691 OmpA family VpaChn25_0649 PF02568 Thiamine biosynthesis protein (ThiI) VpaChn25_0649 PF02926 THUMP domain VpaChn25_0650 PF03466 LysR substrate binding domain VpaChn25_0650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0652 PF04241 Protein of unknown function (DUF423) VpaChn25_0653 PF01728 FtsJ-like methyltransferase VpaChn25_0653 PF18125 RlmM ferredoxin-like domain VpaChn25_0654 PF01223 DNA/RNA non-specific endonuclease VpaChn25_0655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VpaChn25_0655 PF01367 5'-3' exonuclease, C-terminal SAM fold VpaChn25_0656 PF03641 Possible lysine decarboxylase VpaChn25_0656 PF11892 Domain of unknown function (DUF3412) VpaChn25_0656 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VpaChn25_0657 PF00072 Response regulator receiver domain VpaChn25_0657 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0659 PF14489 QueF-like protein VpaChn25_0659 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VpaChn25_0660 PF07348 Syd protein (SUKH-2) VpaChn25_0661 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VpaChn25_0662 PF03180 NLPA lipoprotein VpaChn25_0663 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0664 PF09383 NIL domain VpaChn25_0664 PF00005 ABC transporter VpaChn25_0667 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_0668 PF00367 phosphotransferase system, EIIB VpaChn25_0668 PF02378 Phosphotransferase system, EIIC VpaChn25_0669 PF00128 Alpha amylase, catalytic domain VpaChn25_0669 PF16657 Maltogenic Amylase, C-terminal domain VpaChn25_0672 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VpaChn25_0672 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VpaChn25_0673 PF00464 Serine hydroxymethyltransferase VpaChn25_0674 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VpaChn25_0674 PF04055 Radical SAM superfamily VpaChn25_0675 PF03099 Biotin/lipoate A/B protein ligase family VpaChn25_0676 PF04359 Protein of unknown function (DUF493) VpaChn25_0677 PF00768 D-alanyl-D-alanine carboxypeptidase VpaChn25_0677 PF07943 Penicillin-binding protein 5, C-terminal domain VpaChn25_0678 PF03330 Lytic transglycolase VpaChn25_0678 PF05036 Sporulation related domain VpaChn25_0679 PF01098 Cell cycle protein VpaChn25_0680 PF03717 Penicillin-binding Protein dimerisation domain VpaChn25_0680 PF00905 Penicillin binding protein transpeptidase domain VpaChn25_0681 PF02590 Predicted SPOUT methyltransferase VpaChn25_0683 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VpaChn25_0683 PF06144 DNA polymerase III, delta subunit VpaChn25_0684 PF04390 Lipopolysaccharide-assembly VpaChn25_0685 PF08264 Anticodon-binding domain of tRNA VpaChn25_0685 PF00133 tRNA synthetases class I (I, L, M and V) VpaChn25_0685 PF13603 Leucyl-tRNA synthetase, Domain 2 VpaChn25_0686 PF07295 Zinc-ribbon containing domain VpaChn25_0687 PF00795 Carbon-nitrogen hydrolase VpaChn25_0688 PF03471 Transporter associated domain VpaChn25_0688 PF00571 CBS domain VpaChn25_0689 PF02130 Uncharacterized protein family UPF0054 VpaChn25_0690 PF02562 PhoH-like protein VpaChn25_0691 PF01938 TRAM domain VpaChn25_0691 PF04055 Radical SAM superfamily VpaChn25_0691 PF00919 Uncharacterized protein family UPF0004 VpaChn25_0692 PF01494 FAD binding domain VpaChn25_0694 PF06071 Protein of unknown function (DUF933) VpaChn25_0694 PF01926 50S ribosome-binding GTPase VpaChn25_0695 PF01195 Peptidyl-tRNA hydrolase VpaChn25_0696 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VpaChn25_0696 PF14572 Phosphoribosyl synthetase-associated domain VpaChn25_0697 PF00288 GHMP kinases N terminal domain VpaChn25_0697 PF08544 GHMP kinases C terminal VpaChn25_0698 PF03550 Outer membrane lipoprotein LolB VpaChn25_0699 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VpaChn25_0699 PF01488 Shikimate / quinate 5-dehydrogenase VpaChn25_0699 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VpaChn25_0700 PF03462 PCRF domain VpaChn25_0700 PF00472 RF-1 domain VpaChn25_0701 PF17827 PrmC N-terminal domain VpaChn25_0701 PF13847 Methyltransferase domain VpaChn25_0702 PF04247 Invasion gene expression up-regulator, SirB VpaChn25_0703 PF13369 Transglutaminase-like superfamily VpaChn25_0704 PF00793 DAHP synthetase I family VpaChn25_0705 PF00149 Calcineurin-like phosphoesterase VpaChn25_0705 PF02872 5'-nucleotidase, C-terminal domain VpaChn25_0707 PF13693 Winged helix-turn-helix DNA-binding VpaChn25_0708 PF02914 Bacteriophage Mu transposase VpaChn25_0708 PF09299 Mu transposase, C-terminal VpaChn25_0708 PF09039 Mu DNA binding, I gamma subdomain VpaChn25_0708 PF02316 Mu DNA-binding domain VpaChn25_0709 PF09077 Mu B transposition protein, C terminal VpaChn25_0709 PF13401 AAA domain VpaChn25_0718 PF08765 Mor transcription activator family VpaChn25_0724 PF08461 Ribonuclease R winged-helix domain VpaChn25_0725 PF11985 Protein of unknown function (DUF3486) VpaChn25_0727 PF03237 Terminase-like family VpaChn25_0728 PF06074 Protein of unknown function (DUF935) VpaChn25_0731 PF10124 Mu-like prophage major head subunit gpT VpaChn25_0733 PF07030 Protein of unknown function (DUF1320) VpaChn25_0737 PF04984 Phage tail sheath protein subtilisin-like domain VpaChn25_0737 PF17482 Phage tail sheath C-terminal domain VpaChn25_0743 PF06890 Bacteriophage Mu Gp45 protein VpaChn25_0745 PF04865 Baseplate J-like protein VpaChn25_0746 PF04073 Aminoacyl-tRNA editing domain VpaChn25_0747 PF01479 S4 domain VpaChn25_0747 PF00849 RNA pseudouridylate synthase VpaChn25_0748 PF01713 Smr domain VpaChn25_0751 PF00728 Glycosyl hydrolase family 20, catalytic domain VpaChn25_0751 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VpaChn25_0751 PF03173 Putative carbohydrate binding domain VpaChn25_0751 PF02838 Glycosyl hydrolase family 20, domain 2 VpaChn25_0754 PF00403 Heavy-metal-associated domain VpaChn25_0756 PF13609 Gram-negative porin VpaChn25_0757 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VpaChn25_0758 PF00749 tRNA synthetases class I (E and Q), catalytic domain VpaChn25_0759 PF00691 OmpA family VpaChn25_0759 PF01389 OmpA-like transmembrane domain VpaChn25_0768 PF01584 CheW-like domain VpaChn25_0768 PF00072 Response regulator receiver domain VpaChn25_0769 PF01739 CheR methyltransferase, SAM binding domain VpaChn25_0769 PF03705 CheR methyltransferase, all-alpha domain VpaChn25_0770 PF00460 Flagella basal body rod protein VpaChn25_0771 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_0771 PF00460 Flagella basal body rod protein VpaChn25_0772 PF13860 FlgD Ig-like domain VpaChn25_0772 PF03963 Flagellar hook capping protein - N-terminal region VpaChn25_0772 PF13861 FlgD Tudor-like domain VpaChn25_0773 PF00460 Flagella basal body rod protein VpaChn25_0773 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_0773 PF07559 Flagellar basal body protein FlaE VpaChn25_0775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_0775 PF00460 Flagella basal body rod protein VpaChn25_0776 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_0776 PF00460 Flagella basal body rod protein VpaChn25_0777 PF02107 Flagellar L-ring protein VpaChn25_0778 PF02119 Flagellar P-ring protein VpaChn25_0779 PF10135 Rod binding protein VpaChn25_0779 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VpaChn25_0780 PF07196 Flagellin hook IN motif VpaChn25_0780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_0781 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_0782 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_0782 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_0782 PF07196 Flagellin hook IN motif VpaChn25_0783 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_0783 PF07196 Flagellin hook IN motif VpaChn25_0783 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_0784 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_0784 PF07196 Flagellin hook IN motif VpaChn25_0784 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_0785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VpaChn25_0786 PF00391 PEP-utilising enzyme, mobile domain VpaChn25_0786 PF05524 PEP-utilising enzyme, N-terminal VpaChn25_0786 PF02896 PEP-utilising enzyme, TIM barrel domain VpaChn25_0787 PF00381 PTS HPr component phosphorylation site VpaChn25_0788 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_0790 PF04354 ZipA, C-terminal FtsZ-binding domain VpaChn25_0791 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VpaChn25_0791 PF01653 NAD-dependent DNA ligase adenylation domain VpaChn25_0791 PF12826 Helix-hairpin-helix motif VpaChn25_0791 PF00533 BRCA1 C Terminus (BRCT) domain VpaChn25_0791 PF03120 NAD-dependent DNA ligase OB-fold domain VpaChn25_0792 PF03573 outer membrane porin, OprD family VpaChn25_0794 PF16200 C-terminal region of band_7 VpaChn25_0794 PF01145 SPFH domain / Band 7 family VpaChn25_0795 PF11658 Cellulose biosynthesis protein BcsG VpaChn25_0797 PF10995 Cellulose biosynthesis GIL VpaChn25_0799 PF06564 Cellulose biosynthesis protein BcsQ VpaChn25_0800 PF03552 Cellulose synthase VpaChn25_0800 PF00535 Glycosyl transferase family 2 VpaChn25_0800 PF07238 PilZ domain VpaChn25_0801 PF03170 Bacterial cellulose synthase subunit VpaChn25_0802 PF01270 Glycosyl hydrolases family 8 VpaChn25_0803 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) VpaChn25_0804 PF00085 Thioredoxin VpaChn25_0806 PF00106 short chain dehydrogenase VpaChn25_0807 PF08338 Domain of unknown function (DUF1731) VpaChn25_0807 PF01370 NAD dependent epimerase/dehydratase family VpaChn25_0808 PF07556 Protein of unknown function (DUF1538) VpaChn25_0809 PF07556 Protein of unknown function (DUF1538) VpaChn25_0812 PF12850 Calcineurin-like phosphoesterase superfamily domain VpaChn25_0815 PF17323 Trans-membrane regulatory protein ToxS VpaChn25_0816 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_0817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0817 PF00183 Hsp90 protein VpaChn25_0818 PF05191 Adenylate kinase, active site lid VpaChn25_0819 PF00762 Ferrochelatase VpaChn25_0820 PF00854 POT family VpaChn25_0821 PF02357 Transcription termination factor nusG VpaChn25_0822 PF00733 Asparagine synthase VpaChn25_0822 PF13537 Glutamine amidotransferase domain VpaChn25_0823 PF00999 Sodium/hydrogen exchanger family VpaChn25_0823 PF02254 TrkA-N domain VpaChn25_0824 PF01047 MarR family VpaChn25_0824 PF00480 ROK family VpaChn25_0825 PF01979 Amidohydrolase family VpaChn25_0826 PF02378 Phosphotransferase system, EIIC VpaChn25_0826 PF00367 phosphotransferase system, EIIB VpaChn25_0827 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VpaChn25_0827 PF00749 tRNA synthetases class I (E and Q), catalytic domain VpaChn25_0828 PF01475 Ferric uptake regulator family VpaChn25_0830 PF00258 Flavodoxin VpaChn25_0832 PF12697 Alpha/beta hydrolase family VpaChn25_0833 PF17206 SeqA protein N-terminal domain VpaChn25_0833 PF03925 SeqA protein C-terminal domain VpaChn25_0834 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VpaChn25_0834 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VpaChn25_0834 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VpaChn25_0834 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VpaChn25_0836 PF01784 NIF3 (NGG1p interacting factor 3) VpaChn25_0837 PF00285 Citrate synthase, C-terminal domain VpaChn25_0838 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VpaChn25_0839 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VpaChn25_0840 PF00890 FAD binding domain VpaChn25_0840 PF02910 Fumarate reductase flavoprotein C-term VpaChn25_0841 PF13085 2Fe-2S iron-sulfur cluster binding domain VpaChn25_0842 PF16078 2-oxoglutarate dehydrogenase N-terminus VpaChn25_0842 PF00676 Dehydrogenase E1 component VpaChn25_0842 PF16870 2-oxoglutarate dehydrogenase C-terminal VpaChn25_0842 PF02779 Transketolase, pyrimidine binding domain VpaChn25_0843 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VpaChn25_0843 PF02817 e3 binding domain VpaChn25_0843 PF00364 Biotin-requiring enzyme VpaChn25_0844 PF00549 CoA-ligase VpaChn25_0844 PF08442 ATP-grasp domain VpaChn25_0845 PF02629 CoA binding domain VpaChn25_0845 PF00549 CoA-ligase VpaChn25_0846 PF00950 ABC 3 transport family VpaChn25_0847 PF00005 ABC transporter VpaChn25_0848 PF01297 Zinc-uptake complex component A periplasmic VpaChn25_0849 PF02311 AraC-like ligand binding domain VpaChn25_0849 PF12833 Helix-turn-helix domain VpaChn25_0850 PF04023 FeoA domain VpaChn25_0851 PF07670 Nucleoside recognition VpaChn25_0851 PF02421 Ferrous iron transport protein B VpaChn25_0851 PF17910 FeoB cytosolic helical domain VpaChn25_0851 PF07664 Ferrous iron transport protein B C terminus VpaChn25_0854 PF05746 DALR anticodon binding domain VpaChn25_0854 PF03485 Arginyl tRNA synthetase N terminal domain VpaChn25_0854 PF00750 tRNA synthetases class I (R) VpaChn25_0855 PF06185 YecM protein VpaChn25_0857 PF00089 Trypsin VpaChn25_0858 PF01842 ACT domain VpaChn25_0858 PF00551 Formyl transferase VpaChn25_0859 PF04851 Type III restriction enzyme, res subunit VpaChn25_0859 PF13307 Helicase C-terminal domain VpaChn25_0860 PF00814 Glycoprotease family VpaChn25_0863 PF00561 alpha/beta hydrolase fold VpaChn25_0864 PF00501 AMP-binding enzyme VpaChn25_0864 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_0865 PF01612 3'-5' exonuclease VpaChn25_0865 PF00570 HRDC domain VpaChn25_0866 PF03776 Septum formation topological specificity factor MinE VpaChn25_0867 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VpaChn25_0868 PF03775 Septum formation inhibitor MinC, C-terminal domain VpaChn25_0868 PF05209 Septum formation inhibitor MinC, N-terminal domain VpaChn25_0869 PF05166 YcgL domain VpaChn25_0870 PF13406 Transglycosylase SLT domain VpaChn25_0871 PF03466 LysR substrate binding domain VpaChn25_0871 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_0872 PF01773 Na+ dependent nucleoside transporter N-terminus VpaChn25_0872 PF07670 Nucleoside recognition VpaChn25_0872 PF07662 Na+ dependent nucleoside transporter C-terminus VpaChn25_0873 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VpaChn25_0873 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VpaChn25_0874 PF00109 Beta-ketoacyl synthase, N-terminal domain VpaChn25_0874 PF02801 Beta-ketoacyl synthase, C-terminal domain VpaChn25_0877 PF00109 Beta-ketoacyl synthase, N-terminal domain VpaChn25_0877 PF02801 Beta-ketoacyl synthase, C-terminal domain VpaChn25_0882 PF00221 Aromatic amino acid lyase VpaChn25_0883 PF00535 Glycosyl transferase family 2 VpaChn25_0884 PF07977 FabA-like domain VpaChn25_0885 PF00501 AMP-binding enzyme VpaChn25_0885 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_0887 PF00550 Phosphopantetheine attachment site VpaChn25_0888 PF00550 Phosphopantetheine attachment site VpaChn25_0893 PF04820 Tryptophan halogenase VpaChn25_0895 PF03471 Transporter associated domain VpaChn25_0895 PF01595 Cyclin M transmembrane N-terminal domain VpaChn25_0895 PF00571 CBS domain VpaChn25_0896 PF00270 DEAD/DEAH box helicase VpaChn25_0896 PF00271 Helicase conserved C-terminal domain VpaChn25_0897 PF02080 TrkA-C domain VpaChn25_0897 PF02254 TrkA-N domain VpaChn25_0898 PF02386 Cation transport protein VpaChn25_0901 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VpaChn25_0902 PF03480 Bacterial extracellular solute-binding protein, family 7 VpaChn25_0903 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VpaChn25_0904 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VpaChn25_0906 PF00072 Response regulator receiver domain VpaChn25_0906 PF02954 Bacterial regulatory protein, Fis family VpaChn25_0906 PF00158 Sigma-54 interaction domain VpaChn25_0907 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_0907 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_0907 PF02743 Cache domain VpaChn25_0908 PF05698 Bacterial trigger factor protein (TF) C-terminus VpaChn25_0908 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_0908 PF05697 Bacterial trigger factor protein (TF) VpaChn25_0909 PF00574 Clp protease VpaChn25_0910 PF10431 C-terminal, D2-small domain, of ClpB protein VpaChn25_0910 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_0910 PF06689 ClpX C4-type zinc finger VpaChn25_0911 PF02190 ATP-dependent protease La (LON) substrate-binding domain VpaChn25_0911 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_0911 PF05362 Lon protease (S16) C-terminal proteolytic domain VpaChn25_0912 PF00216 Bacterial DNA-binding protein VpaChn25_0913 PF13145 PPIC-type PPIASE domain VpaChn25_0917 PF13286 Phosphohydrolase-associated domain VpaChn25_0917 PF01966 HD domain VpaChn25_0919 PF00155 Aminotransferase class I and II VpaChn25_0920 PF00425 chorismate binding enzyme VpaChn25_0921 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VpaChn25_0921 PF16582 Middle domain of thiamine pyrophosphate VpaChn25_0921 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VpaChn25_0922 PF12697 Alpha/beta hydrolase family VpaChn25_0923 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_0924 PF13378 Enolase C-terminal domain-like VpaChn25_0925 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_0925 PF00501 AMP-binding enzyme VpaChn25_0927 PF03601 Conserved hypothetical protein 698 VpaChn25_0929 PF07690 Major Facilitator Superfamily VpaChn25_0932 PF13533 Biotin-lipoyl like VpaChn25_0933 PF00873 AcrB/AcrD/AcrF family VpaChn25_0937 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_0938 PF01037 Lrp/AsnC ligand binding domain VpaChn25_0938 PF13404 AsnC-type helix-turn-helix domain VpaChn25_0941 PF09619 Type III secretion system lipoprotein chaperone (YscW) VpaChn25_0942 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VpaChn25_0945 PF17152 Periplasmic sensor domain VpaChn25_0945 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_0946 PF08032 RNA 2'-O ribose methyltransferase substrate binding VpaChn25_0946 PF00588 SpoU rRNA Methylase family VpaChn25_0947 PF11953 Domain of unknown function (DUF3470) VpaChn25_0947 PF00037 4Fe-4S binding domain VpaChn25_0949 PF00571 CBS domain VpaChn25_0949 PF00478 IMP dehydrogenase / GMP reductase domain VpaChn25_0950 PF00403 Heavy-metal-associated domain VpaChn25_0951 PF01048 Phosphorylase superfamily VpaChn25_0953 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_0953 PF00672 HAMP domain VpaChn25_0954 PF01230 HIT domain VpaChn25_0957 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VpaChn25_0957 PF13036 Peptidoglycan-synthase activator LpoB VpaChn25_0959 PF05728 Uncharacterised protein family (UPF0227) VpaChn25_0960 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_0963 PF00271 Helicase conserved C-terminal domain VpaChn25_0963 PF00270 DEAD/DEAH box helicase VpaChn25_0963 PF02559 CarD-like/TRCF domain VpaChn25_0963 PF17757 UvrB interaction domain VpaChn25_0963 PF03461 TRCF domain VpaChn25_0965 PF12704 MacB-like periplasmic core domain VpaChn25_0965 PF02687 FtsX-like permease family VpaChn25_0966 PF00005 ABC transporter VpaChn25_0967 PF12704 MacB-like periplasmic core domain VpaChn25_0967 PF02687 FtsX-like permease family VpaChn25_0969 PF13567 Domain of unknown function (DUF4131) VpaChn25_0969 PF03772 Competence protein VpaChn25_0969 PF00753 Metallo-beta-lactamase superfamily VpaChn25_0970 PF00664 ABC transporter transmembrane region VpaChn25_0970 PF00005 ABC transporter VpaChn25_0971 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VpaChn25_0972 PF03966 Trm112p-like protein VpaChn25_0973 PF02348 Cytidylyltransferase VpaChn25_0974 PF04293 SpoVR like protein VpaChn25_0975 PF04285 Protein of unknown function (DUF444) VpaChn25_0976 PF06798 PrkA serine protein kinase C-terminal domain VpaChn25_0976 PF08298 PrkA AAA domain VpaChn25_0977 PF03887 YfbU domain VpaChn25_0979 PF04055 Radical SAM superfamily VpaChn25_0981 PF02901 Pyruvate formate lyase-like VpaChn25_0981 PF01228 Glycine radical VpaChn25_0984 PF00005 ABC transporter VpaChn25_0985 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_0986 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0987 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_0989 PF03372 Endonuclease/Exonuclease/phosphatase family VpaChn25_0996 PF06892 Phage regulatory protein CII (CP76) VpaChn25_1001 PF05840 Bacteriophage replication gene A protein (GPA) VpaChn25_1002 PF02556 Preprotein translocase subunit SecB VpaChn25_1015 PF01258 Prokaryotic dksA/traR C4-type zinc finger VpaChn25_1028 PF10689 Protein of unknown function (DUF2496) VpaChn25_1029 PF07445 Primosomal replication protein priC VpaChn25_1030 PF01925 Sulfite exporter TauE/SafE VpaChn25_1031 PF13307 Helicase C-terminal domain VpaChn25_1031 PF06733 DEAD_2 VpaChn25_1033 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VpaChn25_1034 PF00849 RNA pseudouridylate synthase VpaChn25_1035 PF03971 Monomeric isocitrate dehydrogenase VpaChn25_1036 PF00313 'Cold-shock' DNA-binding domain VpaChn25_1037 PF02617 ATP-dependent Clp protease adaptor protein ClpS VpaChn25_1038 PF10431 C-terminal, D2-small domain, of ClpB protein VpaChn25_1038 PF02861 Clp amino terminal domain, pathogenicity island component VpaChn25_1038 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_1038 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_1038 PF17871 AAA lid domain VpaChn25_1040 PF01176 Translation initiation factor 1A / IF-1 VpaChn25_1041 PF04376 Arginine-tRNA-protein transferase, N terminus VpaChn25_1041 PF04377 Arginine-tRNA-protein transferase, C terminus VpaChn25_1042 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VpaChn25_1044 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VpaChn25_1045 PF10692 Protein of unknown function (DUF2498) VpaChn25_1046 PF01751 Toprim domain VpaChn25_1046 PF01131 DNA topoisomerase VpaChn25_1046 PF01396 Topoisomerase DNA binding C4 zinc finger VpaChn25_1046 PF08272 Topoisomerase I zinc-ribbon-like VpaChn25_1047 PF00483 Nucleotidyl transferase VpaChn25_1048 PF08323 Starch synthase catalytic domain VpaChn25_1048 PF00534 Glycosyl transferases group 1 VpaChn25_1052 PF04993 TfoX N-terminal domain VpaChn25_1052 PF04994 TfoX C-terminal domain VpaChn25_1053 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_1054 PF02613 Nitrate reductase delta subunit VpaChn25_1055 PF00072 Response regulator receiver domain VpaChn25_1055 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_1056 PF02698 DUF218 domain VpaChn25_1058 PF17192 MukF middle domain VpaChn25_1058 PF17193 MukF C-terminal domain VpaChn25_1058 PF03882 MukF winged-helix domain VpaChn25_1059 PF04288 MukE-like family VpaChn25_1060 PF16330 MukB hinge domain VpaChn25_1060 PF04310 MukB N-terminal VpaChn25_1062 PF18030 RimK PreATP-grasp domain VpaChn25_1062 PF08443 RimK-like ATP-grasp domain VpaChn25_1064 PF08443 RimK-like ATP-grasp domain VpaChn25_1064 PF18030 RimK PreATP-grasp domain VpaChn25_1065 PF08003 Protein of unknown function (DUF1698) VpaChn25_1066 PF13649 Methyltransferase domain VpaChn25_1067 PF01904 Protein of unknown function DUF72 VpaChn25_1068 PF02938 GAD domain VpaChn25_1068 PF00152 tRNA synthetases class II (D, K and N) VpaChn25_1068 PF01336 OB-fold nucleic acid binding domain VpaChn25_1069 PF02075 Crossover junction endodeoxyribonuclease RuvC VpaChn25_1070 PF00672 HAMP domain VpaChn25_1070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1070 PF02203 Tar ligand binding domain homologue VpaChn25_1071 PF01330 RuvA N terminal domain VpaChn25_1071 PF07499 RuvA, C-terminal domain VpaChn25_1072 PF05496 Holliday junction DNA helicase RuvB P-loop domain VpaChn25_1072 PF05491 RuvB C-terminal winged helix domain VpaChn25_1072 PF17864 RuvB AAA lid domain VpaChn25_1073 PF01654 Cytochrome bd terminal oxidase subunit I VpaChn25_1074 PF02322 Cytochrome bd terminal oxidase subunit II VpaChn25_1076 PF03061 Thioesterase superfamily VpaChn25_1077 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_1078 PF02472 Biopolymer transport protein ExbD/TolR VpaChn25_1080 PF07676 WD40-like Beta Propeller Repeat VpaChn25_1080 PF04052 TolB amino-terminal domain VpaChn25_1081 PF00691 OmpA family VpaChn25_1082 PF16331 TolA binding protein trimerisation VpaChn25_1082 PF13174 Tetratricopeptide repeat VpaChn25_1083 PF02445 Quinolinate synthetase A protein VpaChn25_1085 PF03994 Domain of Unknown Function (DUF350) VpaChn25_1087 PF03738 Glutathionylspermidine synthase preATP-grasp VpaChn25_1089 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1089 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1089 PF09308 LuxQ, periplasmic VpaChn25_1089 PF00072 Response regulator receiver domain VpaChn25_1090 PF06610 L-alanine exporter VpaChn25_1091 PF00589 Phage integrase family VpaChn25_1091 PF13356 Arm DNA-binding domain VpaChn25_1098 PF00266 Aminotransferase class-V VpaChn25_1101 PF00672 HAMP domain VpaChn25_1101 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1101 PF12729 Four helix bundle sensory module for signal transduction VpaChn25_1102 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_1102 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_1103 PF00873 AcrB/AcrD/AcrF family VpaChn25_1107 PF00579 tRNA synthetases class I (W and Y) VpaChn25_1109 PF03372 Endonuclease/Exonuclease/phosphatase family VpaChn25_1110 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VpaChn25_1112 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1112 PF03466 LysR substrate binding domain VpaChn25_1114 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VpaChn25_1114 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VpaChn25_1115 PF01037 Lrp/AsnC ligand binding domain VpaChn25_1116 PF09397 Ftsk gamma domain VpaChn25_1116 PF17854 FtsK alpha domain VpaChn25_1116 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VpaChn25_1116 PF01580 FtsK/SpoIIIE family VpaChn25_1117 PF03548 Outer membrane lipoprotein carrier protein LolA VpaChn25_1118 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_1118 PF16193 AAA C-terminal domain VpaChn25_1118 PF12002 MgsA AAA+ ATPase C terminal VpaChn25_1119 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VpaChn25_1119 PF02403 Seryl-tRNA synthetase N-terminal domain VpaChn25_1122 PF01258 Prokaryotic dksA/traR C4-type zinc finger VpaChn25_1123 PF00202 Aminotransferase class-III VpaChn25_1124 PF04055 Radical SAM superfamily VpaChn25_1124 PF06968 Biotin and Thiamin Synthesis associated domain VpaChn25_1125 PF00155 Aminotransferase class I and II VpaChn25_1126 PF08241 Methyltransferase domain VpaChn25_1129 PF01435 Peptidase family M48 VpaChn25_1131 PF00106 short chain dehydrogenase VpaChn25_1138 PF00206 Lyase VpaChn25_1138 PF08328 Adenylosuccinate lyase C-terminal VpaChn25_1139 PF04356 Protein of unknown function (DUF489) VpaChn25_1142 PF00294 pfkB family carbohydrate kinase VpaChn25_1143 PF00816 H-NS histone family VpaChn25_1144 PF03553 Na+/H+ antiporter family VpaChn25_1146 PF00072 Response regulator receiver domain VpaChn25_1146 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1146 PF00158 Sigma-54 interaction domain VpaChn25_1147 PF01634 ATP phosphoribosyltransferase VpaChn25_1147 PF08029 HisG, C-terminal domain VpaChn25_1148 PF00815 Histidinol dehydrogenase VpaChn25_1149 PF00155 Aminotransferase class I and II VpaChn25_1150 PF00475 Imidazoleglycerol-phosphate dehydratase VpaChn25_1150 PF08645 Polynucleotide kinase 3 phosphatase VpaChn25_1151 PF00117 Glutamine amidotransferase class-I VpaChn25_1152 PF00977 Histidine biosynthesis protein VpaChn25_1153 PF00977 Histidine biosynthesis protein VpaChn25_1154 PF01502 Phosphoribosyl-AMP cyclohydrolase VpaChn25_1154 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VpaChn25_1155 PF02810 SEC-C motif VpaChn25_1156 PF00563 EAL domain VpaChn25_1156 PF08668 HDOD domain VpaChn25_1157 PF00149 Calcineurin-like phosphoesterase VpaChn25_1158 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VpaChn25_1159 PF09190 DALR domain VpaChn25_1159 PF01406 tRNA synthetases class I (C) catalytic domain VpaChn25_1160 PF00265 Thymidine kinase VpaChn25_1161 PF02698 DUF218 domain VpaChn25_1166 PF01226 Formate/nitrite transporter VpaChn25_1168 PF03649 Uncharacterised protein family (UPF0014) VpaChn25_1169 PF06796 Periplasmic nitrate reductase protein NapE VpaChn25_1170 PF03264 NapC/NirT cytochrome c family, N-terminal region VpaChn25_1171 PF01568 Molydopterin dinucleotide binding domain VpaChn25_1171 PF00384 Molybdopterin oxidoreductase VpaChn25_1171 PF18364 Molybdopterin oxidoreductase N-terminal domain VpaChn25_1172 PF16875 Glycosyl hydrolase family 36 N-terminal domain VpaChn25_1172 PF16874 Glycosyl hydrolase family 36 C-terminal domain VpaChn25_1174 PF01368 DHH family VpaChn25_1174 PF02833 DHHA2 domain VpaChn25_1176 PF00005 ABC transporter VpaChn25_1177 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_1177 PF00005 ABC transporter VpaChn25_1178 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_1178 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1179 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_1181 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1181 PF00158 Sigma-54 interaction domain VpaChn25_1182 PF04012 PspA/IM30 family VpaChn25_1183 PF06667 Phage shock protein B VpaChn25_1184 PF04024 PspC domain VpaChn25_1185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_1187 PF00873 AcrB/AcrD/AcrF family VpaChn25_1188 PF03352 Methyladenine glycosylase VpaChn25_1189 PF03280 Proteobacterial lipase chaperone protein VpaChn25_1190 PF00561 alpha/beta hydrolase fold VpaChn25_1191 PF01053 Cys/Met metabolism PLP-dependent enzyme VpaChn25_1193 PF13396 Phospholipase_D-nuclease N-terminal VpaChn25_1193 PF13091 PLD-like domain VpaChn25_1194 PF00209 Sodium:neurotransmitter symporter family VpaChn25_1195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1195 PF12729 Four helix bundle sensory module for signal transduction VpaChn25_1195 PF00672 HAMP domain VpaChn25_1196 PF00849 RNA pseudouridylate synthase VpaChn25_1198 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_1198 PF00970 Oxidoreductase FAD-binding domain VpaChn25_1198 PF00175 Oxidoreductase NAD-binding domain VpaChn25_1199 PF03063 Prismane/CO dehydrogenase family VpaChn25_1200 PF01590 GAF domain VpaChn25_1200 PF00158 Sigma-54 interaction domain VpaChn25_1202 PF01066 CDP-alcohol phosphatidyltransferase VpaChn25_1203 PF00005 ABC transporter VpaChn25_1204 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1205 PF13416 Bacterial extracellular solute-binding protein VpaChn25_1206 PF09335 SNARE associated Golgi protein VpaChn25_1208 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_1208 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VpaChn25_1210 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1211 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_1211 PF00072 Response regulator receiver domain VpaChn25_1214 PF00149 Calcineurin-like phosphoesterase VpaChn25_1214 PF02872 5'-nucleotidase, C-terminal domain VpaChn25_1217 PF01386 Ribosomal L25p family VpaChn25_1218 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1218 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1218 PF00672 HAMP domain VpaChn25_1219 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_1219 PF00072 Response regulator receiver domain VpaChn25_1221 PF00271 Helicase conserved C-terminal domain VpaChn25_1221 PF04851 Type III restriction enzyme, res subunit VpaChn25_1222 PF01479 S4 domain VpaChn25_1222 PF00849 RNA pseudouridylate synthase VpaChn25_1223 PF07690 Major Facilitator Superfamily VpaChn25_1226 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VpaChn25_1229 PF03264 NapC/NirT cytochrome c family, N-terminal region VpaChn25_1230 PF13460 NAD(P)H-binding VpaChn25_1230 PF11066 Protein of unknown function (DUF2867) VpaChn25_1231 PF01554 MatE VpaChn25_1232 PF00005 ABC transporter VpaChn25_1235 PF06965 Na+/H+ antiporter 1 VpaChn25_1236 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_1236 PF16295 Tetracyclin repressor-like, C-terminal domain VpaChn25_1237 PF02770 Acyl-CoA dehydrogenase, middle domain VpaChn25_1237 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VpaChn25_1237 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VpaChn25_1237 PF09317 Domain of unknown function (DUF1974) VpaChn25_1238 PF07055 Enoyl reductase FAD binding domain VpaChn25_1238 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VpaChn25_1238 PF12241 Trans-2-enoyl-CoA reductase catalytic region VpaChn25_1239 PF02080 TrkA-C domain VpaChn25_1239 PF06826 Predicted Permease Membrane Region VpaChn25_1240 PF00462 Glutaredoxin VpaChn25_1241 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_1242 PF01380 SIS domain VpaChn25_1242 PF01418 Helix-turn-helix domain, rpiR family VpaChn25_1243 PF00282 Pyridoxal-dependent decarboxylase conserved domain VpaChn25_1245 PF03956 Lysine exporter LysO VpaChn25_1248 PF04993 TfoX N-terminal domain VpaChn25_1248 PF04994 TfoX C-terminal domain VpaChn25_1251 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_1251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1251 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1253 PF00266 Aminotransferase class-V VpaChn25_1254 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_1255 PF00005 ABC transporter VpaChn25_1255 PF00664 ABC transporter transmembrane region VpaChn25_1256 PF00664 ABC transporter transmembrane region VpaChn25_1256 PF00005 ABC transporter VpaChn25_1257 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_1259 PF00266 Aminotransferase class-V VpaChn25_1261 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1261 PF00072 Response regulator receiver domain VpaChn25_1262 PF00939 Sodium:sulfate symporter transmembrane region VpaChn25_1263 PF02698 DUF218 domain VpaChn25_1264 PF03949 Malic enzyme, NAD binding domain VpaChn25_1264 PF00390 Malic enzyme, N-terminal domain VpaChn25_1265 PF04408 Helicase associated domain (HA2) VpaChn25_1265 PF00271 Helicase conserved C-terminal domain VpaChn25_1265 PF08482 ATP-dependent helicase C-terminal VpaChn25_1265 PF00270 DEAD/DEAH box helicase VpaChn25_1266 PF02253 Phospholipase A1 VpaChn25_1268 PF09423 PhoD-like phosphatase VpaChn25_1268 PF16655 PhoD-like phosphatase, N-terminal domain VpaChn25_1269 PF01259 SAICAR synthetase VpaChn25_1273 PF00691 OmpA family VpaChn25_1273 PF05736 OprF membrane domain VpaChn25_1276 PF02913 FAD linked oxidases, C-terminal domain VpaChn25_1276 PF13183 4Fe-4S dicluster domain VpaChn25_1276 PF01565 FAD binding domain VpaChn25_1277 PF04191 Phospholipid methyltransferase VpaChn25_1279 PF00221 Aromatic amino acid lyase VpaChn25_1280 PF17392 Urocanase C-terminal domain VpaChn25_1280 PF17391 Urocanase N-terminal domain VpaChn25_1280 PF01175 Urocanase Rossmann-like domain VpaChn25_1281 PF00491 Arginase family VpaChn25_1282 PF01979 Amidohydrolase family VpaChn25_1283 PF07702 UTRA domain VpaChn25_1283 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_1286 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VpaChn25_1286 PF02824 TGS domain VpaChn25_1286 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VpaChn25_1286 PF03129 Anticodon binding domain VpaChn25_1287 PF05198 Translation initiation factor IF-3, N-terminal domain VpaChn25_1287 PF00707 Translation initiation factor IF-3, C-terminal domain VpaChn25_1288 PF01632 Ribosomal protein L35 VpaChn25_1289 PF00453 Ribosomal protein L20 VpaChn25_1290 PF01906 Putative heavy-metal-binding VpaChn25_1296 PF17158 Membrane-associated sensor, integral membrane domain VpaChn25_1296 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1297 PF01409 tRNA synthetases class II core domain (F) VpaChn25_1297 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VpaChn25_1298 PF03484 tRNA synthetase B5 domain VpaChn25_1298 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VpaChn25_1298 PF01588 Putative tRNA binding domain VpaChn25_1298 PF03483 B3/4 domain VpaChn25_1298 PF03147 Ferredoxin-fold anticodon binding domain VpaChn25_1300 PF00216 Bacterial DNA-binding protein VpaChn25_1302 PF05724 Thiopurine S-methyltransferase (TPMT) VpaChn25_1303 PF02222 ATP-grasp domain VpaChn25_1304 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VpaChn25_1304 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VpaChn25_1305 PF04172 LrgB-like family VpaChn25_1306 PF03788 LrgA family VpaChn25_1307 PF00929 Exonuclease VpaChn25_1307 PF08411 Exonuclease C-terminal VpaChn25_1309 PF13460 NAD(P)H-binding VpaChn25_1311 PF02277 Phosphoribosyltransferase VpaChn25_1312 PF02654 Cobalamin-5-phosphate synthase VpaChn25_1313 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VpaChn25_1317 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VpaChn25_1318 PF01032 FecCD transport family VpaChn25_1319 PF00005 ABC transporter VpaChn25_1323 PF03466 LysR substrate binding domain VpaChn25_1323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1325 PF01863 Protein of unknown function DUF45 VpaChn25_1326 PF05971 RNA methyltransferase VpaChn25_1330 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_1331 PF00171 Aldehyde dehydrogenase family VpaChn25_1332 PF05544 Proline racemase VpaChn25_1335 PF02423 Ornithine cyclodeaminase/mu-crystallin family VpaChn25_1336 PF00701 Dihydrodipicolinate synthetase family VpaChn25_1337 PF00005 ABC transporter VpaChn25_1337 PF08402 TOBE domain VpaChn25_1338 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1339 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1342 PF01752 Collagenase VpaChn25_1342 PF08453 Peptidase family M9 N-terminal VpaChn25_1344 PF00005 ABC transporter VpaChn25_1344 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_1345 PF00005 ABC transporter VpaChn25_1345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_1346 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_1346 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1347 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1348 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_1349 PF01048 Phosphorylase superfamily VpaChn25_1353 PF07687 Peptidase dimerisation domain VpaChn25_1353 PF01546 Peptidase family M20/M25/M40 VpaChn25_1354 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_1355 PF04209 homogentisate 1,2-dioxygenase VpaChn25_1357 PF14497 Glutathione S-transferase, C-terminal domain VpaChn25_1357 PF02798 Glutathione S-transferase, N-terminal domain VpaChn25_1363 PF01810 LysE type translocator VpaChn25_1364 PF13302 Acetyltransferase (GNAT) domain VpaChn25_1367 PF03553 Na+/H+ antiporter family VpaChn25_1368 PF00120 Glutamine synthetase, catalytic domain VpaChn25_1369 PF07722 Peptidase C26 VpaChn25_1370 PF07883 Cupin domain VpaChn25_1370 PF01381 Helix-turn-helix VpaChn25_1371 PF00171 Aldehyde dehydrogenase family VpaChn25_1372 PF01266 FAD dependent oxidoreductase VpaChn25_1373 PF00795 Carbon-nitrogen hydrolase VpaChn25_1374 PF04371 Porphyromonas-type peptidyl-arginine deiminase VpaChn25_1375 PF00171 Aldehyde dehydrogenase family VpaChn25_1376 PF00202 Aminotransferase class-III VpaChn25_1377 PF02833 DHHA2 domain VpaChn25_1377 PF01368 DHH family VpaChn25_1378 PF00563 EAL domain VpaChn25_1378 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_1381 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VpaChn25_1381 PF01411 tRNA synthetases class II (A) VpaChn25_1381 PF02272 DHHA1 domain VpaChn25_1382 PF12833 Helix-turn-helix domain VpaChn25_1384 PF01047 MarR family VpaChn25_1385 PF04237 YjbR VpaChn25_1387 PF01928 CYTH domain VpaChn25_1389 PF12464 Maltose acetyltransferase VpaChn25_1389 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_1392 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1392 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VpaChn25_1392 PF00672 HAMP domain VpaChn25_1392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1392 PF01627 Hpt domain VpaChn25_1392 PF00072 Response regulator receiver domain VpaChn25_1393 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1393 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_1393 PF00563 EAL domain VpaChn25_1397 PF04204 Homoserine O-succinyltransferase VpaChn25_1399 PF13520 Amino acid permease VpaChn25_1402 PF03279 Bacterial lipid A biosynthesis acyltransferase VpaChn25_1403 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VpaChn25_1404 PF01810 LysE type translocator VpaChn25_1406 PF01235 Sodium:alanine symporter family VpaChn25_1411 PF01966 HD domain VpaChn25_1413 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_1414 PF03222 Tryptophan/tyrosine permease family VpaChn25_1418 PF00005 ABC transporter VpaChn25_1418 PF00664 ABC transporter transmembrane region VpaChn25_1419 PF00664 ABC transporter transmembrane region VpaChn25_1419 PF00005 ABC transporter VpaChn25_1424 PF00012 Hsp70 protein VpaChn25_1425 PF00012 Hsp70 protein VpaChn25_1433 PF01568 Molydopterin dinucleotide binding domain VpaChn25_1433 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_1433 PF00384 Molybdopterin oxidoreductase VpaChn25_1434 PF13247 4Fe-4S dicluster domain VpaChn25_1434 PF12800 4Fe-4S binding domain VpaChn25_1435 PF04976 DMSO reductase anchor subunit (DmsC) VpaChn25_1436 PF02613 Nitrate reductase delta subunit VpaChn25_1437 PF00037 4Fe-4S binding domain VpaChn25_1437 PF12838 4Fe-4S dicluster domain VpaChn25_1438 PF02525 Flavodoxin-like fold VpaChn25_1439 PF00270 DEAD/DEAH box helicase VpaChn25_1439 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VpaChn25_1439 PF00271 Helicase conserved C-terminal domain VpaChn25_1439 PF04408 Helicase associated domain (HA2) VpaChn25_1439 PF11898 Domain of unknown function (DUF3418) VpaChn25_1442 PF02028 BCCT, betaine/carnitine/choline family transporter VpaChn25_1444 PF02397 Bacterial sugar transferase VpaChn25_1445 PF00535 Glycosyl transferase family 2 VpaChn25_1446 PF13439 Glycosyltransferase Family 4 VpaChn25_1446 PF00534 Glycosyl transferases group 1 VpaChn25_1452 PF13439 Glycosyltransferase Family 4 VpaChn25_1452 PF00534 Glycosyl transferases group 1 VpaChn25_1454 PF00158 Sigma-54 interaction domain VpaChn25_1454 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1454 PF00072 Response regulator receiver domain VpaChn25_1457 PF02563 Polysaccharide biosynthesis/export protein VpaChn25_1457 PF10531 SLBB domain VpaChn25_1459 PF01740 STAS domain VpaChn25_1460 PF01068 ATP dependent DNA ligase domain VpaChn25_1460 PF14743 DNA ligase OB-like domain VpaChn25_1462 PF01554 MatE VpaChn25_1463 PF00677 Lumazine binding domain VpaChn25_1466 PF01339 CheB methylesterase VpaChn25_1466 PF00072 Response regulator receiver domain VpaChn25_1467 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1467 PF05230 MASE2 domain VpaChn25_1469 PF00877 NlpC/P60 family VpaChn25_1470 PF17202 Single cache domain 3 VpaChn25_1470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1470 PF00672 HAMP domain VpaChn25_1478 PF00480 ROK family VpaChn25_1480 PF03453 MoeA N-terminal region (domain I and II) VpaChn25_1480 PF00994 Probable molybdopterin binding domain VpaChn25_1480 PF03454 MoeA C-terminal region (domain IV) VpaChn25_1481 PF12804 MobA-like NTP transferase domain VpaChn25_1482 PF08402 TOBE domain VpaChn25_1482 PF00005 ABC transporter VpaChn25_1483 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1484 PF12849 PBP superfamily domain VpaChn25_1485 PF00158 Sigma-54 interaction domain VpaChn25_1485 PF00072 Response regulator receiver domain VpaChn25_1485 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1486 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1486 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1487 PF12848 ABC transporter VpaChn25_1487 PF00005 ABC transporter VpaChn25_1488 PF02634 FdhD/NarQ family VpaChn25_1492 PF02613 Nitrate reductase delta subunit VpaChn25_1494 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_1494 PF00384 Molybdopterin oxidoreductase VpaChn25_1494 PF01568 Molydopterin dinucleotide binding domain VpaChn25_1495 PF13247 4Fe-4S dicluster domain VpaChn25_1501 PF00909 Ammonium Transporter Family VpaChn25_1503 PF02146 Sir2 family VpaChn25_1504 PF13416 Bacterial extracellular solute-binding protein VpaChn25_1505 PF13416 Bacterial extracellular solute-binding protein VpaChn25_1506 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1507 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1508 PF08402 TOBE domain VpaChn25_1508 PF00005 ABC transporter VpaChn25_1512 PF01171 PP-loop family VpaChn25_1513 PF00582 Universal stress protein family VpaChn25_1514 PF13545 Crp-like helix-turn-helix domain VpaChn25_1514 PF00027 Cyclic nucleotide-binding domain VpaChn25_1517 PF00403 Heavy-metal-associated domain VpaChn25_1519 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VpaChn25_1519 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VpaChn25_1522 PF00115 Cytochrome C and Quinol oxidase polypeptide I VpaChn25_1525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1525 PF00072 Response regulator receiver domain VpaChn25_1525 PF09308 LuxQ, periplasmic VpaChn25_1525 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1527 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain VpaChn25_1527 PF13538 UvrD-like helicase C-terminal domain VpaChn25_1527 PF14490 Helix-hairpin-helix containing domain VpaChn25_1534 PF06303 MatP N-terminal domain VpaChn25_1534 PF17414 MatP C-terminal ribbon-helix-helix domain VpaChn25_1535 PF05362 Lon protease (S16) C-terminal proteolytic domain VpaChn25_1535 PF13654 AAA domain VpaChn25_1536 PF07977 FabA-like domain VpaChn25_1537 PF04957 Ribosome modulation factor VpaChn25_1541 PF10672 S-adenosylmethionine-dependent methyltransferase VpaChn25_1541 PF02926 THUMP domain VpaChn25_1541 PF01170 Putative RNA methylase family UPF0020 VpaChn25_1542 PF07126 Cell-division protein ZapC VpaChn25_1543 PF01180 Dihydroorotate dehydrogenase VpaChn25_1544 PF05088 Bacterial NAD-glutamate dehydrogenase VpaChn25_1545 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VpaChn25_1545 PF01433 Peptidase family M1 domain VpaChn25_1545 PF11940 Domain of unknown function (DUF3458) Ig-like fold VpaChn25_1546 PF06018 CodY GAF-like domain VpaChn25_1546 PF08222 CodY helix-turn-helix domain VpaChn25_1581 PF01712 Deoxynucleoside kinase VpaChn25_1591 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VpaChn25_1591 PF00476 DNA polymerase family A VpaChn25_1591 PF01612 3'-5' exonuclease VpaChn25_1591 PF01367 5'-3' exonuclease, C-terminal SAM fold VpaChn25_1598 PF07508 Recombinase VpaChn25_1598 PF00239 Resolvase, N terminal domain VpaChn25_1598 PF13408 Recombinase zinc beta ribbon domain VpaChn25_1600 PF11818 C-terminal domain of tail specific protease (DUF3340) VpaChn25_1600 PF03572 Peptidase family S41 VpaChn25_1600 PF00595 PDZ domain VpaChn25_1600 PF17804 Tail specific protease N-terminal domain VpaChn25_1601 PF17516 ProQ C-terminal domain VpaChn25_1601 PF04352 ProQ/FINO family VpaChn25_1602 PF13185 GAF domain VpaChn25_1603 PF00005 ABC transporter VpaChn25_1603 PF00664 ABC transporter transmembrane region VpaChn25_1604 PF04403 Paraquat-inducible protein A VpaChn25_1605 PF02470 MlaD protein VpaChn25_1606 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VpaChn25_1606 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VpaChn25_1606 PF01189 16S rRNA methyltransferase RsmB/F VpaChn25_1610 PF00793 DAHP synthetase I family VpaChn25_1611 PF04461 Protein of unknown function (DUF520) VpaChn25_1612 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VpaChn25_1612 PF14824 Sirohaem biosynthesis protein central VpaChn25_1612 PF10414 Sirohaem synthase dimerisation region VpaChn25_1613 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_1614 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1615 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1616 PF00005 ABC transporter VpaChn25_1617 PF01027 Inhibitor of apoptosis-promoting Bax1 VpaChn25_1619 PF04358 DsrC like protein VpaChn25_1620 PF00708 Acylphosphatase VpaChn25_1621 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1621 PF00672 HAMP domain VpaChn25_1621 PF02743 Cache domain VpaChn25_1622 PF17785 PUA-like domain VpaChn25_1622 PF10672 S-adenosylmethionine-dependent methyltransferase VpaChn25_1624 PF00691 OmpA family VpaChn25_1624 PF05736 OprF membrane domain VpaChn25_1626 PF05736 OprF membrane domain VpaChn25_1626 PF00691 OmpA family VpaChn25_1628 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1628 PF17158 Membrane-associated sensor, integral membrane domain VpaChn25_1629 PF06508 Queuosine biosynthesis protein QueC VpaChn25_1630 PF04055 Radical SAM superfamily VpaChn25_1633 PF00089 Trypsin VpaChn25_1635 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_1635 PF00501 AMP-binding enzyme VpaChn25_1635 PF16177 Acetyl-coenzyme A synthetase N-terminus VpaChn25_1636 PF04303 PrpF protein VpaChn25_1637 PF00694 Aconitase C-terminal domain VpaChn25_1637 PF00330 Aconitase family (aconitate hydratase) VpaChn25_1638 PF00285 Citrate synthase, C-terminal domain VpaChn25_1644 PF01970 Tripartite tricarboxylate transporter TctA family VpaChn25_1645 PF01925 Sulfite exporter TauE/SafE VpaChn25_1647 PF05844 YopD protein VpaChn25_1649 PF07720 Tetratricopeptide repeat VpaChn25_1650 PF04792 V antigen (LcrV) protein VpaChn25_1651 PF07216 LcrG protein VpaChn25_1652 PF09621 Type III secretion system regulator (LcrR) VpaChn25_1653 PF00771 FHIPEP family VpaChn25_1657 PF09059 TyeA VpaChn25_1658 PF07201 HrpJ-like domain VpaChn25_1659 PF02874 ATP synthase alpha/beta family, beta-barrel domain VpaChn25_1659 PF18269 T3SS EscN ATPase C-terminal domain VpaChn25_1659 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_1662 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VpaChn25_1663 PF00813 FliP family VpaChn25_1664 PF01313 Bacterial export proteins, family 3 VpaChn25_1665 PF01311 Bacterial export proteins, family 1 VpaChn25_1666 PF01312 FlhB HrpN YscU SpaS Family VpaChn25_1667 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1667 PF03466 LysR substrate binding domain VpaChn25_1668 PF12146 Serine aminopeptidase, S33 VpaChn25_1669 PF12146 Serine aminopeptidase, S33 VpaChn25_1675 PF02661 Fic/DOC family VpaChn25_1677 PF02108 Flagellar assembly protein FliH VpaChn25_1679 PF01514 Secretory protein of YscJ/FliF family VpaChn25_1680 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI VpaChn25_1682 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) VpaChn25_1683 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF VpaChn25_1685 PF16697 Inner membrane component of T3SS, cytoplasmic domain VpaChn25_1685 PF16693 Inner membrane component of T3SS, periplasmic domain VpaChn25_1689 PF12833 Helix-turn-helix domain VpaChn25_1693 PF00171 Aldehyde dehydrogenase family VpaChn25_1694 PF01590 GAF domain VpaChn25_1694 PF00158 Sigma-54 interaction domain VpaChn25_1694 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1697 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VpaChn25_1697 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VpaChn25_1698 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VpaChn25_1699 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VpaChn25_1699 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VpaChn25_1700 PF00072 Response regulator receiver domain VpaChn25_1701 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VpaChn25_1701 PF17203 Single cache domain 3 VpaChn25_1701 PF00989 PAS fold VpaChn25_1701 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1703 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_1706 PF03150 Di-haem cytochrome c peroxidase VpaChn25_1706 PF00034 Cytochrome c VpaChn25_1707 PF13840 ACT domain VpaChn25_1707 PF00696 Amino acid kinase family VpaChn25_1708 PF06339 Ectoine synthase VpaChn25_1709 PF00202 Aminotransferase class-III VpaChn25_1710 PF00583 Acetyltransferase (GNAT) family VpaChn25_1711 PF02028 BCCT, betaine/carnitine/choline family transporter VpaChn25_1714 PF00005 ABC transporter VpaChn25_1714 PF00571 CBS domain VpaChn25_1715 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1716 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VpaChn25_1718 PF00501 AMP-binding enzyme VpaChn25_1722 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_1722 PF00072 Response regulator receiver domain VpaChn25_1723 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1723 PF08521 Two-component sensor kinase N-terminal VpaChn25_1723 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1724 PF00884 Sulfatase VpaChn25_1726 PF03741 Integral membrane protein TerC family VpaChn25_1728 PF04055 Radical SAM superfamily VpaChn25_1729 PF11230 Protein of unknown function (DUF3029) VpaChn25_1730 PF01810 LysE type translocator VpaChn25_1731 PF11871 Domain of unknown function (DUF3391) VpaChn25_1731 PF01966 HD domain VpaChn25_1732 PF00563 EAL domain VpaChn25_1732 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1732 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_1733 PF00158 Sigma-54 interaction domain VpaChn25_1733 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1733 PF00072 Response regulator receiver domain VpaChn25_1734 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_1734 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1734 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1735 PF00939 Sodium:sulfate symporter transmembrane region VpaChn25_1742 PF03466 LysR substrate binding domain VpaChn25_1742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1743 PF08543 Phosphomethylpyrimidine kinase VpaChn25_1745 PF13533 Biotin-lipoyl like VpaChn25_1763 PF13495 Phage integrase, N-terminal SAM-like domain VpaChn25_1763 PF00589 Phage integrase family VpaChn25_1766 PF13302 Acetyltransferase (GNAT) domain VpaChn25_1767 PF00158 Sigma-54 interaction domain VpaChn25_1767 PF18024 Helix-turn-helix domain VpaChn25_1768 PF05128 Domain of unknown function (DUF697) VpaChn25_1769 PF04317 YcjX-like family, DUF463 VpaChn25_1772 PF00425 chorismate binding enzyme VpaChn25_1772 PF04715 Anthranilate synthase component I, N terminal region VpaChn25_1773 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1773 PF09308 LuxQ, periplasmic VpaChn25_1773 PF00072 Response regulator receiver domain VpaChn25_1773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1775 PF00293 NUDIX domain VpaChn25_1776 PF03222 Tryptophan/tyrosine permease family VpaChn25_1777 PF03313 Serine dehydratase alpha chain VpaChn25_1777 PF03315 Serine dehydratase beta chain VpaChn25_1778 PF04940 Sensors of blue-light using FAD VpaChn25_1778 PF00563 EAL domain VpaChn25_1780 PF01242 6-pyruvoyl tetrahydropterin synthase VpaChn25_1782 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1782 PF02743 Cache domain VpaChn25_1782 PF00672 HAMP domain VpaChn25_1783 PF00152 tRNA synthetases class II (D, K and N) VpaChn25_1783 PF01336 OB-fold nucleic acid binding domain VpaChn25_1785 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_1785 PF00155 Aminotransferase class I and II VpaChn25_1788 PF00155 Aminotransferase class I and II VpaChn25_1792 PF00672 HAMP domain VpaChn25_1792 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1793 PF02028 BCCT, betaine/carnitine/choline family transporter VpaChn25_1794 PF01047 MarR family VpaChn25_1795 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_1795 PF00072 Response regulator receiver domain VpaChn25_1796 PF07730 Histidine kinase VpaChn25_1796 PF17200 Single Cache domain 2 VpaChn25_1797 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VpaChn25_1799 PF03480 Bacterial extracellular solute-binding protein, family 7 VpaChn25_1802 PF00753 Metallo-beta-lactamase superfamily VpaChn25_1803 PF05951 Bacterial protein of unknown function (DUF882) VpaChn25_1804 PF03734 L,D-transpeptidase catalytic domain VpaChn25_1804 PF01471 Putative peptidoglycan binding domain VpaChn25_1809 PF00925 GTP cyclohydrolase II VpaChn25_1811 PF03918 Cytochrome C biogenesis protein VpaChn25_1812 PF08534 Redoxin VpaChn25_1813 PF01578 Cytochrome C assembly protein VpaChn25_1813 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VpaChn25_1814 PF03916 Polysulphide reductase, NrfD VpaChn25_1815 PF13247 4Fe-4S dicluster domain VpaChn25_1817 PF02335 Cytochrome c552 VpaChn25_1820 PF00521 DNA gyrase/topoisomerase IV, subunit A VpaChn25_1820 PF03989 DNA gyrase C-terminal domain, beta-propeller VpaChn25_1822 PF03477 ATP cone domain VpaChn25_1822 PF00317 Ribonucleotide reductase, all-alpha domain VpaChn25_1822 PF02867 Ribonucleotide reductase, barrel domain VpaChn25_1823 PF00268 Ribonucleotide reductase, small chain VpaChn25_1826 PF14490 Helix-hairpin-helix containing domain VpaChn25_1826 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain VpaChn25_1826 PF13538 UvrD-like helicase C-terminal domain VpaChn25_1828 PF00268 Ribonucleotide reductase, small chain VpaChn25_1830 PF00994 Probable molybdopterin binding domain VpaChn25_1833 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VpaChn25_1834 PF03435 Saccharopine dehydrogenase NADP binding domain VpaChn25_1834 PF16653 Saccharopine dehydrogenase C-terminal domain VpaChn25_1835 PF00202 Aminotransferase class-III VpaChn25_1836 PF01066 CDP-alcohol phosphatidyltransferase VpaChn25_1837 PF01541 GIY-YIG catalytic domain VpaChn25_1837 PF02151 UvrB/uvrC motif VpaChn25_1837 PF08459 UvrC Helix-hairpin-helix N-terminal VpaChn25_1838 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_1838 PF00072 Response regulator receiver domain VpaChn25_1839 PF03104 DNA polymerase family B, exonuclease domain VpaChn25_1839 PF00136 DNA polymerase family B VpaChn25_1841 PF08207 Elongation factor P (EF-P) KOW-like domain VpaChn25_1841 PF09285 Elongation factor P, C-terminal VpaChn25_1841 PF01132 Elongation factor P (EF-P) OB domain VpaChn25_1842 PF04269 Protein of unknown function, DUF440 VpaChn25_1844 PF00849 RNA pseudouridylate synthase VpaChn25_1844 PF01479 S4 domain VpaChn25_1846 PF01300 Telomere recombination VpaChn25_1847 PF02811 PHP domain VpaChn25_1848 PF08056 Tryptophan operon leader peptide VpaChn25_1849 PF04715 Anthranilate synthase component I, N terminal region VpaChn25_1849 PF00425 chorismate binding enzyme VpaChn25_1850 PF00117 Glutamine amidotransferase class-I VpaChn25_1851 PF00591 Glycosyl transferase family, a/b domain VpaChn25_1851 PF02885 Glycosyl transferase family, helical bundle domain VpaChn25_1852 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VpaChn25_1852 PF00218 Indole-3-glycerol phosphate synthase VpaChn25_1853 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_1854 PF00290 Tryptophan synthase alpha chain VpaChn25_1855 PF13545 Crp-like helix-turn-helix domain VpaChn25_1855 PF00027 Cyclic nucleotide-binding domain VpaChn25_1856 PF00501 AMP-binding enzyme VpaChn25_1856 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_1857 PF00375 Sodium:dicarboxylate symporter family VpaChn25_1858 PF17327 Acyl homoserine lactone synthase VpaChn25_1859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1859 PF00072 Response regulator receiver domain VpaChn25_1861 PF04279 Intracellular septation protein A VpaChn25_1862 PF03061 Thioesterase superfamily VpaChn25_1863 PF03795 YCII-related domain VpaChn25_1865 PF08267 Cobalamin-independent synthase, N-terminal domain VpaChn25_1865 PF01717 Cobalamin-independent synthase, Catalytic domain VpaChn25_1866 PF03466 LysR substrate binding domain VpaChn25_1866 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1869 PF01590 GAF domain VpaChn25_1869 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1869 PF00563 EAL domain VpaChn25_1869 PF00360 Phytochrome region VpaChn25_1870 PF11842 Domain of unknown function (DUF3362) VpaChn25_1870 PF04055 Radical SAM superfamily VpaChn25_1870 PF08497 Radical SAM N-terminal VpaChn25_1871 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_1871 PF00672 HAMP domain VpaChn25_1872 PF00072 Response regulator receiver domain VpaChn25_1872 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_1873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1873 PF00672 HAMP domain VpaChn25_1873 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1877 PF03466 LysR substrate binding domain VpaChn25_1878 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_1878 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_1880 PF01717 Cobalamin-independent synthase, Catalytic domain VpaChn25_1880 PF08267 Cobalamin-independent synthase, N-terminal domain VpaChn25_1882 PF12833 Helix-turn-helix domain VpaChn25_1882 PF02311 AraC-like ligand binding domain VpaChn25_1883 PF00857 Isochorismatase family VpaChn25_1884 PF00005 ABC transporter VpaChn25_1884 PF02687 FtsX-like permease family VpaChn25_1884 PF12704 MacB-like periplasmic core domain VpaChn25_1885 PF12704 MacB-like periplasmic core domain VpaChn25_1885 PF00005 ABC transporter VpaChn25_1885 PF02687 FtsX-like permease family VpaChn25_1886 PF12704 MacB-like periplasmic core domain VpaChn25_1886 PF00005 ABC transporter VpaChn25_1886 PF02687 FtsX-like permease family VpaChn25_1888 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_1891 PF01938 TRAM domain VpaChn25_1891 PF05958 tRNA (Uracil-5-)-methyltransferase VpaChn25_1894 PF00085 Thioredoxin VpaChn25_1895 PF02683 Cytochrome C biogenesis protein transmembrane region VpaChn25_1895 PF11412 Disulphide bond corrector protein DsbC VpaChn25_1897 PF03466 LysR substrate binding domain VpaChn25_1897 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_1898 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_1898 PF00072 Response regulator receiver domain VpaChn25_1899 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_1899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_1900 PF13247 4Fe-4S dicluster domain VpaChn25_1901 PF03916 Polysulphide reductase, NrfD VpaChn25_1902 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_1902 PF00384 Molybdopterin oxidoreductase VpaChn25_1902 PF01568 Molydopterin dinucleotide binding domain VpaChn25_1903 PF00034 Cytochrome c VpaChn25_1904 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VpaChn25_1905 PF04403 Paraquat-inducible protein A VpaChn25_1906 PF02470 MlaD protein VpaChn25_1908 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VpaChn25_1910 PF00535 Glycosyl transferase family 2 VpaChn25_1911 PF01370 NAD dependent epimerase/dehydratase family VpaChn25_1913 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_1914 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VpaChn25_1915 PF18073 Rubredoxin metal binding domain VpaChn25_1916 PF06305 Lipopolysaccharide assembly protein A domain VpaChn25_1917 PF00216 Bacterial DNA-binding protein VpaChn25_1918 PF00575 S1 RNA binding domain VpaChn25_1919 PF02224 Cytidylate kinase VpaChn25_1920 PF01343 Peptidase family S49 VpaChn25_1920 PF08496 Peptidase family S49 N-terminal VpaChn25_1921 PF00106 short chain dehydrogenase VpaChn25_1924 PF14579 Helix-hairpin-helix motif VpaChn25_1924 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VpaChn25_1924 PF07733 Bacterial DNA polymerase III alpha NTPase domain VpaChn25_1924 PF01336 OB-fold nucleic acid binding domain VpaChn25_1924 PF02811 PHP domain VpaChn25_1925 PF01584 CheW-like domain VpaChn25_1925 PF00072 Response regulator receiver domain VpaChn25_1926 PF00480 ROK family VpaChn25_1927 PF00224 Pyruvate kinase, barrel domain VpaChn25_1927 PF02887 Pyruvate kinase, alpha/beta domain VpaChn25_1928 PF01734 Patatin-like phospholipase VpaChn25_1930 PF00209 Sodium:neurotransmitter symporter family VpaChn25_1932 PF02378 Phosphotransferase system, EIIC VpaChn25_1932 PF00367 phosphotransferase system, EIIB VpaChn25_1933 PF01026 TatD related DNase VpaChn25_1934 PF09115 DNA polymerase III, delta subunit, C terminal VpaChn25_1935 PF02223 Thymidylate kinase VpaChn25_1936 PF02618 YceG-like family VpaChn25_1937 PF01063 Amino-transferase class IV VpaChn25_1938 PF00109 Beta-ketoacyl synthase, N-terminal domain VpaChn25_1938 PF02801 Beta-ketoacyl synthase, C-terminal domain VpaChn25_1939 PF00550 Phosphopantetheine attachment site VpaChn25_1941 PF00698 Acyl transferase domain VpaChn25_1942 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VpaChn25_1942 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VpaChn25_1943 PF02504 Fatty acid synthesis protein VpaChn25_1944 PF01783 Ribosomal L32p protein family VpaChn25_1945 PF02620 Large ribosomal RNA subunit accumulation protein YceD VpaChn25_1946 PF02545 Maf-like protein VpaChn25_1947 PF00849 RNA pseudouridylate synthase VpaChn25_1947 PF01479 S4 domain VpaChn25_1948 PF00575 S1 RNA binding domain VpaChn25_1948 PF10150 Ribonuclease E/G family VpaChn25_1948 PF12111 Polyribonucleotide phosphorylase C terminal VpaChn25_1949 PF00916 Sulfate permease family VpaChn25_1949 PF01740 STAS domain VpaChn25_1950 PF01451 Low molecular weight phosphotyrosine protein phosphatase VpaChn25_1951 PF12557 Cob(I)alamin adenosyltransferase N terminal VpaChn25_1951 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VpaChn25_1953 PF00485 Phosphoribulokinase / Uridine kinase family VpaChn25_1954 PF10609 NUBPL iron-transfer P-loop NTPase VpaChn25_1955 PF09334 tRNA synthetases class I (M) VpaChn25_1955 PF01588 Putative tRNA binding domain VpaChn25_1957 PF07840 FadR C-terminal domain VpaChn25_1957 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_1958 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VpaChn25_1959 PF02600 Disulfide bond formation protein DsbB VpaChn25_1960 PF07516 SecA Wing and Scaffold domain VpaChn25_1960 PF01043 SecA preprotein cross-linking domain VpaChn25_1960 PF07517 SecA DEAD-like domain VpaChn25_1960 PF02810 SEC-C motif VpaChn25_1961 PF01207 Dihydrouridine synthase (Dus) VpaChn25_1962 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_1963 PF02903 Alpha amylase, N-terminal ig-like domain VpaChn25_1963 PF00128 Alpha amylase, catalytic domain VpaChn25_1964 PF00005 ABC transporter VpaChn25_1965 PF02653 Branched-chain amino acid transport system / permease component VpaChn25_1967 PF04217 Protein of unknown function, DUF412 VpaChn25_1968 PF00871 Acetokinase family VpaChn25_1969 PF01515 Phosphate acetyl/butaryl transferase VpaChn25_1969 PF07085 DRTGG domain VpaChn25_1970 PF13194 Domain of unknown function (DUF4010) VpaChn25_1972 PF13409 Glutathione S-transferase, N-terminal domain VpaChn25_1973 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_1973 PF00005 ABC transporter VpaChn25_1974 PF00005 ABC transporter VpaChn25_1974 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_1975 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_1975 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1976 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_1977 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_1978 PF02391 MoaE protein VpaChn25_1979 PF02597 ThiS family VpaChn25_1980 PF01967 MoaC family VpaChn25_1981 PF00994 Probable molybdopterin binding domain VpaChn25_1982 PF04055 Radical SAM superfamily VpaChn25_1982 PF06463 Molybdenum Cofactor Synthesis C VpaChn25_1983 PF01933 Uncharacterised protein family UPF0052 VpaChn25_1984 PF01627 Hpt domain VpaChn25_1985 PF00158 Sigma-54 interaction domain VpaChn25_1985 PF00072 Response regulator receiver domain VpaChn25_1985 PF02954 Bacterial regulatory protein, Fis family VpaChn25_1986 PF04851 Type III restriction enzyme, res subunit VpaChn25_1986 PF12344 Ultra-violet resistance protein B VpaChn25_1986 PF17757 UvrB interaction domain VpaChn25_1986 PF00271 Helicase conserved C-terminal domain VpaChn25_1986 PF02151 UvrB/uvrC motif VpaChn25_1988 PF02508 Rnf-Nqr subunit, membrane protein VpaChn25_1989 PF04060 Putative Fe-S cluster VpaChn25_1990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VpaChn25_1990 PF13375 RnfC Barrel sandwich hybrid domain VpaChn25_1990 PF12838 4Fe-4S dicluster domain VpaChn25_1990 PF10531 SLBB domain VpaChn25_1991 PF03116 NQR2, RnfD, RnfE family VpaChn25_1992 PF04205 FMN-binding domain VpaChn25_1993 PF02508 Rnf-Nqr subunit, membrane protein VpaChn25_1994 PF00730 HhH-GPD superfamily base excision DNA repair protein VpaChn25_1994 PF00633 Helix-hairpin-helix motif VpaChn25_1994 PF10576 Iron-sulfur binding domain of endonuclease III VpaChn25_1995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_1996 PF10952 Protein of unknown function (DUF2753) VpaChn25_1997 PF18393 MotY N-terminal domain VpaChn25_1997 PF00691 OmpA family VpaChn25_1998 PF00929 Exonuclease VpaChn25_1999 PF13726 Na+-H+ antiporter family VpaChn25_1999 PF03553 Na+/H+ antiporter family VpaChn25_2001 PF00462 Glutaredoxin VpaChn25_2002 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VpaChn25_2002 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VpaChn25_2005 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_2005 PF00171 Aldehyde dehydrogenase family VpaChn25_2006 PF01914 MarC family integral membrane protein VpaChn25_2007 PF00520 Ion transport protein VpaChn25_2007 PF00027 Cyclic nucleotide-binding domain VpaChn25_2008 PF01118 Semialdehyde dehydrogenase, NAD binding domain VpaChn25_2008 PF02774 Semialdehyde dehydrogenase, dimerisation domain VpaChn25_2009 PF03553 Na+/H+ antiporter family VpaChn25_2012 PF04245 37-kD nucleoid-associated bacterial protein VpaChn25_2013 PF07208 Protein of unknown function (DUF1414) VpaChn25_2014 PF00884 Sulfatase VpaChn25_2014 PF11893 Domain of unknown function (DUF3413) VpaChn25_2015 PF00850 Histone deacetylase domain VpaChn25_2016 PF00106 short chain dehydrogenase VpaChn25_2018 PF01131 DNA topoisomerase VpaChn25_2018 PF01751 Toprim domain VpaChn25_2019 PF00881 Nitroreductase family VpaChn25_2020 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_2020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_2021 PF01343 Peptidase family S49 VpaChn25_2022 PF00710 Asparaginase, N-terminal VpaChn25_2022 PF17763 Glutaminase/Asparaginase C-terminal domain VpaChn25_2023 PF07023 Protein of unknown function (DUF1315) VpaChn25_2025 PF01641 SelR domain VpaChn25_2026 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VpaChn25_2026 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VpaChn25_2027 PF01263 Aldose 1-epimerase VpaChn25_2028 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_2028 PF02743 Cache domain VpaChn25_2028 PF00672 HAMP domain VpaChn25_2029 PF13847 Methyltransferase domain VpaChn25_2032 PF00245 Alkaline phosphatase VpaChn25_2034 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_2036 PF05552 Conserved TM helix VpaChn25_2036 PF00924 Mechanosensitive ion channel VpaChn25_2037 PF03692 Putative zinc- or iron-chelating domain VpaChn25_2038 PF04226 Transglycosylase associated protein VpaChn25_2039 PF03692 Putative zinc- or iron-chelating domain VpaChn25_2041 PF03313 Serine dehydratase alpha chain VpaChn25_2042 PF01042 Endoribonuclease L-PSP VpaChn25_2045 PF00230 Major intrinsic protein VpaChn25_2046 PF13662 Toprim domain VpaChn25_2046 PF02132 RecR protein VpaChn25_2047 PF02575 YbaB/EbfC DNA-binding family VpaChn25_2048 PF12169 DNA polymerase III subunits gamma and tau domain III VpaChn25_2048 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VpaChn25_2048 PF12170 DNA polymerase III tau subunit V interacting with alpha VpaChn25_2049 PF00156 Phosphoribosyl transferase domain VpaChn25_2050 PF04304 Protein of unknown function (DUF454) VpaChn25_2052 PF00072 Response regulator receiver domain VpaChn25_2053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2053 PF03466 LysR substrate binding domain VpaChn25_2054 PF00156 Phosphoribosyl transferase domain VpaChn25_2055 PF02674 Colicin V production protein VpaChn25_2056 PF05036 Sporulation related domain VpaChn25_2057 PF08245 Mur ligase middle domain VpaChn25_2057 PF02875 Mur ligase family, glutamate ligase domain VpaChn25_2058 PF01039 Carboxyl transferase domain VpaChn25_2058 PF17848 Acetyl-coA carboxylase zinc finger domain VpaChn25_2059 PF01416 tRNA pseudouridine synthase VpaChn25_2060 PF01118 Semialdehyde dehydrogenase, NAD binding domain VpaChn25_2060 PF02774 Semialdehyde dehydrogenase, dimerisation domain VpaChn25_2061 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VpaChn25_2061 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VpaChn25_2061 PF11890 Domain of unknown function (DUF3410) VpaChn25_2062 PF00109 Beta-ketoacyl synthase, N-terminal domain VpaChn25_2062 PF02801 Beta-ketoacyl synthase, C-terminal domain VpaChn25_2063 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VpaChn25_2063 PF01266 FAD dependent oxidoreductase VpaChn25_2065 PF08891 YfcL protein VpaChn25_2066 PF04315 Elongation factor P hydroxylase VpaChn25_2068 PF03458 UPF0126 domain VpaChn25_2069 PF01264 Chorismate synthase VpaChn25_2070 PF05175 Methyltransferase small domain VpaChn25_2071 PF01713 Smr domain VpaChn25_2072 PF00300 Histidine phosphatase superfamily (branch 1) VpaChn25_2073 PF00675 Insulinase (Peptidase family M16) VpaChn25_2073 PF16187 Middle or third domain of peptidase_M16 VpaChn25_2073 PF05193 Peptidase M16 inactive domain VpaChn25_2075 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_2075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VpaChn25_2075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VpaChn25_2076 PF02803 Thiolase, C-terminal domain VpaChn25_2076 PF00108 Thiolase, N-terminal domain VpaChn25_2077 PF08281 Sigma-70, region 4 VpaChn25_2077 PF04542 Sigma-70 region 2 VpaChn25_2079 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VpaChn25_2080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VpaChn25_2081 PF04333 MlaA lipoprotein VpaChn25_2083 PF03918 Cytochrome C biogenesis protein VpaChn25_2084 PF08534 Redoxin VpaChn25_2085 PF01578 Cytochrome C assembly protein VpaChn25_2085 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VpaChn25_2086 PF03100 CcmE VpaChn25_2087 PF04995 Heme exporter protein D (CcmD) VpaChn25_2088 PF01578 Cytochrome C assembly protein VpaChn25_2089 PF03379 CcmB protein VpaChn25_2090 PF00005 ABC transporter VpaChn25_2092 PF01584 CheW-like domain VpaChn25_2094 PF13614 AAA domain VpaChn25_2095 PF00072 Response regulator receiver domain VpaChn25_2095 PF01339 CheB methylesterase VpaChn25_2096 PF07194 P2 response regulator binding domain VpaChn25_2096 PF02895 Signal transducing histidine kinase, homodimeric domain VpaChn25_2096 PF01627 Hpt domain VpaChn25_2096 PF01584 CheW-like domain VpaChn25_2096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2097 PF04344 Chemotaxis phosphatase, CheZ VpaChn25_2098 PF00072 Response regulator receiver domain VpaChn25_2099 PF04539 Sigma-70 region 3 VpaChn25_2099 PF04542 Sigma-70 region 2 VpaChn25_2099 PF04545 Sigma-70, region 4 VpaChn25_2100 PF10609 NUBPL iron-transfer P-loop NTPase VpaChn25_2101 PF00448 SRP54-type protein, GTPase domain VpaChn25_2102 PF00771 FHIPEP family VpaChn25_2103 PF01312 FlhB HrpN YscU SpaS Family VpaChn25_2104 PF01311 Bacterial export proteins, family 1 VpaChn25_2105 PF01313 Bacterial export proteins, family 3 VpaChn25_2106 PF00813 FliP family VpaChn25_2107 PF04347 Flagellar biosynthesis protein, FliO VpaChn25_2108 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VpaChn25_2109 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VpaChn25_2109 PF02154 Flagellar motor switch protein FliM VpaChn25_2113 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_2113 PF18269 T3SS EscN ATPase C-terminal domain VpaChn25_2115 PF14842 FliG N-terminal domain VpaChn25_2115 PF01706 FliG C-terminal domain VpaChn25_2115 PF14841 FliG middle domain VpaChn25_2116 PF01514 Secretory protein of YscJ/FliF family VpaChn25_2116 PF08345 Flagellar M-ring protein C-terminal VpaChn25_2117 PF02049 Flagellar hook-basal body complex protein FliE VpaChn25_2118 PF02954 Bacterial regulatory protein, Fis family VpaChn25_2118 PF00158 Sigma-54 interaction domain VpaChn25_2118 PF00072 Response regulator receiver domain VpaChn25_2119 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_2119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2120 PF01590 GAF domain VpaChn25_2120 PF00158 Sigma-54 interaction domain VpaChn25_2120 PF02954 Bacterial regulatory protein, Fis family VpaChn25_2121 PF02561 Flagellar protein FliS VpaChn25_2123 PF02465 Flagellar hook-associated protein 2 N-terminus VpaChn25_2123 PF07196 Flagellin hook IN motif VpaChn25_2123 PF07195 Flagellar hook-associated protein 2 C-terminus VpaChn25_2124 PF03646 FlaG protein VpaChn25_2125 PF07196 Flagellin hook IN motif VpaChn25_2125 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_2125 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_2126 PF07196 Flagellin hook IN motif VpaChn25_2126 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_2126 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_2127 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_2127 PF07196 Flagellin hook IN motif VpaChn25_2127 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_2128 PF04261 Dyp-type peroxidase family VpaChn25_2129 PF11143 Protein of unknown function (DUF2919) VpaChn25_2134 PF03960 ArsC family VpaChn25_2135 PF01546 Peptidase family M20/M25/M40 VpaChn25_2135 PF07687 Peptidase dimerisation domain VpaChn25_2139 PF00701 Dihydrodipicolinate synthetase family VpaChn25_2140 PF01842 ACT domain VpaChn25_2141 PF00578 AhpC/TSA family VpaChn25_2142 PF01594 AI-2E family transporter VpaChn25_2144 PF01435 Peptidase family M48 VpaChn25_2144 PF13181 Tetratricopeptide repeat VpaChn25_2145 PF03960 ArsC family VpaChn25_2146 PF03358 NADPH-dependent FMN reductase VpaChn25_2149 PF00860 Permease family VpaChn25_2151 PF02769 AIR synthase related protein, C-terminal domain VpaChn25_2151 PF00586 AIR synthase related protein, N-terminal domain VpaChn25_2152 PF00551 Formyl transferase VpaChn25_2153 PF13230 Glutamine amidotransferases class-II VpaChn25_2154 PF13580 SIS domain VpaChn25_2155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VpaChn25_2155 PF09317 Domain of unknown function (DUF1974) VpaChn25_2155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VpaChn25_2155 PF02770 Acyl-CoA dehydrogenase, middle domain VpaChn25_2156 PF01740 STAS domain VpaChn25_2156 PF00916 Sulfate permease family VpaChn25_2158 PF00929 Exonuclease VpaChn25_2159 PF00075 RNase H VpaChn25_2160 PF08241 Methyltransferase domain VpaChn25_2161 PF16123 Hydroxyacylglutathione hydrolase C-terminus VpaChn25_2161 PF00753 Metallo-beta-lactamase superfamily VpaChn25_2162 PF01476 LysM domain VpaChn25_2162 PF01464 Transglycosylase SLT domain VpaChn25_2164 PF03372 Endonuclease/Exonuclease/phosphatase family VpaChn25_2165 PF00543 Nitrogen regulatory protein P-II VpaChn25_2166 PF00034 Cytochrome c VpaChn25_2167 PF09179 TilS substrate binding domain VpaChn25_2167 PF11734 TilS substrate C-terminal domain VpaChn25_2167 PF01171 PP-loop family VpaChn25_2168 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VpaChn25_2169 PF01336 OB-fold nucleic acid binding domain VpaChn25_2169 PF02811 PHP domain VpaChn25_2169 PF14579 Helix-hairpin-helix motif VpaChn25_2169 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VpaChn25_2169 PF07733 Bacterial DNA polymerase III alpha NTPase domain VpaChn25_2170 PF01351 Ribonuclease HII VpaChn25_2171 PF02684 Lipid-A-disaccharide synthetase VpaChn25_2172 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VpaChn25_2172 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_2173 PF07977 FabA-like domain VpaChn25_2174 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_2174 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VpaChn25_2175 PF03938 Outer membrane protein (OmpH-like) VpaChn25_2176 PF01103 Surface antigen VpaChn25_2176 PF07244 Surface antigen variable number repeat VpaChn25_2177 PF02163 Peptidase family M50 VpaChn25_2177 PF17820 PDZ domain VpaChn25_2178 PF13288 DXP reductoisomerase C-terminal domain VpaChn25_2178 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VpaChn25_2178 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VpaChn25_2180 PF01255 Putative undecaprenyl diphosphate synthase VpaChn25_2181 PF01765 Ribosome recycling factor VpaChn25_2182 PF00696 Amino acid kinase family VpaChn25_2183 PF00889 Elongation factor TS VpaChn25_2184 PF00318 Ribosomal protein S2 VpaChn25_2185 PF00557 Metallopeptidase family M24 VpaChn25_2186 PF01966 HD domain VpaChn25_2186 PF01909 Nucleotidyltransferase domain VpaChn25_2186 PF08335 GlnD PII-uridylyltransferase VpaChn25_2186 PF01842 ACT domain VpaChn25_2187 PF11944 Protein of unknown function (DUF3461) VpaChn25_2188 PF00849 RNA pseudouridylate synthase VpaChn25_2189 PF04287 tRNA pseudouridine synthase C VpaChn25_2193 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VpaChn25_2194 PF03806 AbgT putative transporter family VpaChn25_2196 PF01197 Ribosomal protein L31 VpaChn25_2197 PF18389 TrmO C-terminal domain VpaChn25_2197 PF01980 tRNA-methyltransferase O VpaChn25_2198 PF04073 Aminoacyl-tRNA editing domain VpaChn25_2198 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VpaChn25_2198 PF03129 Anticodon binding domain VpaChn25_2200 PF06786 Uncharacterised protein family (UPF0253) VpaChn25_2202 PF00209 Sodium:neurotransmitter symporter family VpaChn25_2205 PF01272 Transcription elongation factor, GreA/GreB, C-term VpaChn25_2205 PF03449 Transcription elongation factor, N-terminal VpaChn25_2206 PF00271 Helicase conserved C-terminal domain VpaChn25_2206 PF00570 HRDC domain VpaChn25_2206 PF16124 RecQ zinc-binding VpaChn25_2206 PF09382 RQC domain VpaChn25_2206 PF00270 DEAD/DEAH box helicase VpaChn25_2207 PF11799 impB/mucB/samB family C-terminal domain VpaChn25_2207 PF00817 impB/mucB/samB family VpaChn25_2207 PF11798 IMS family HHH motif VpaChn25_2210 PF02424 ApbE family VpaChn25_2211 PF00970 Oxidoreductase FAD-binding domain VpaChn25_2211 PF00175 Oxidoreductase NAD-binding domain VpaChn25_2211 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_2212 PF02508 Rnf-Nqr subunit, membrane protein VpaChn25_2213 PF02508 Rnf-Nqr subunit, membrane protein VpaChn25_2214 PF04205 FMN-binding domain VpaChn25_2215 PF03116 NQR2, RnfD, RnfE family VpaChn25_2216 PF11973 NQRA C-terminal domain VpaChn25_2216 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VpaChn25_2217 PF01722 BolA-like protein VpaChn25_2218 PF05175 Methyltransferase small domain VpaChn25_2219 PF03923 Uncharacterized lipoprotein VpaChn25_2219 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VpaChn25_2220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VpaChn25_2221 PF07690 Major Facilitator Superfamily VpaChn25_2223 PF04545 Sigma-70, region 4 VpaChn25_2223 PF04542 Sigma-70 region 2 VpaChn25_2226 PF03502 Nucleoside-specific channel-forming protein, Tsx VpaChn25_2227 PF08546 Ketopantoate reductase PanE/ApbA C terminal VpaChn25_2227 PF02558 Ketopantoate reductase PanE/ApbA VpaChn25_2228 PF01965 DJ-1/PfpI family VpaChn25_2229 PF00266 Aminotransferase class-V VpaChn25_2231 PF02657 Fe-S metabolism associated domain VpaChn25_2232 PF00899 ThiF family VpaChn25_2233 PF03562 MltA specific insert domain VpaChn25_2233 PF06725 3D domain VpaChn25_2235 PF00583 Acetyltransferase (GNAT) family VpaChn25_2235 PF00696 Amino acid kinase family VpaChn25_2237 PF13538 UvrD-like helicase C-terminal domain VpaChn25_2238 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_2238 PF13361 UvrD-like helicase C-terminal domain VpaChn25_2238 PF12705 PD-(D/E)XK nuclease superfamily VpaChn25_2239 PF17946 RecC C-terminal domain VpaChn25_2240 PF11893 Domain of unknown function (DUF3413) VpaChn25_2240 PF00884 Sulfatase VpaChn25_2242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2242 PF03466 LysR substrate binding domain VpaChn25_2243 PF07130 YebG protein VpaChn25_2244 PF14602 Hexapeptide repeat of succinyl-transferase VpaChn25_2244 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VpaChn25_2245 PF03009 Glycerophosphoryl diester phosphodiesterase family VpaChn25_2246 PF07690 Major Facilitator Superfamily VpaChn25_2248 PF00230 Major intrinsic protein VpaChn25_2249 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VpaChn25_2249 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VpaChn25_2250 PF08220 DeoR-like helix-turn-helix domain VpaChn25_2250 PF00455 DeoR C terminal sensor domain VpaChn25_2251 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VpaChn25_2251 PF01266 FAD dependent oxidoreductase VpaChn25_2252 PF01544 CorA-like Mg2+ transporter protein VpaChn25_2256 PF01588 Putative tRNA binding domain VpaChn25_2257 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_2260 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_2261 PF01263 Aldose 1-epimerase VpaChn25_2262 PF00288 GHMP kinases N terminal domain VpaChn25_2262 PF10509 Galactokinase galactose-binding signature VpaChn25_2262 PF08544 GHMP kinases C terminal VpaChn25_2263 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VpaChn25_2263 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VpaChn25_2264 PF16363 GDP-mannose 4,6 dehydratase VpaChn25_2265 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_2266 PF02837 Glycosyl hydrolases family 2, sugar binding domain VpaChn25_2266 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VpaChn25_2266 PF00703 Glycosyl hydrolases family 2 VpaChn25_2266 PF16353 Domain of unknown function(DUF4981) VpaChn25_2266 PF02929 Beta galactosidase small chain VpaChn25_2267 PF04074 YhcH/YjgK/YiaL VpaChn25_2268 PF13520 Amino acid permease VpaChn25_2269 PF03466 LysR substrate binding domain VpaChn25_2269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2275 PF00437 Type II/IV secretion system protein VpaChn25_2281 PF13629 Pilus formation protein N terminal region VpaChn25_2281 PF04972 BON domain VpaChn25_2281 PF00263 Bacterial type II and III secretion system protein VpaChn25_2285 PF02805 Metal binding domain of Ada VpaChn25_2285 PF12833 Helix-turn-helix domain VpaChn25_2286 PF00501 AMP-binding enzyme VpaChn25_2288 PF03466 LysR substrate binding domain VpaChn25_2288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2289 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2289 PF14492 Elongation Factor G, domain II VpaChn25_2289 PF00679 Elongation factor G C-terminus VpaChn25_2289 PF03764 Elongation factor G, domain IV VpaChn25_2289 PF03144 Elongation factor Tu domain 2 VpaChn25_2290 PF18073 Rubredoxin metal binding domain VpaChn25_2292 PF18429 Domain of unknown function (DUF5609) VpaChn25_2294 PF01048 Phosphorylase superfamily VpaChn25_2295 PF01676 Metalloenzyme superfamily VpaChn25_2296 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VpaChn25_2296 PF00591 Glycosyl transferase family, a/b domain VpaChn25_2296 PF02885 Glycosyl transferase family, helical bundle domain VpaChn25_2297 PF01791 DeoC/LacD family aldolase VpaChn25_2298 PF01773 Na+ dependent nucleoside transporter N-terminus VpaChn25_2298 PF07662 Na+ dependent nucleoside transporter C-terminus VpaChn25_2298 PF07670 Nucleoside recognition VpaChn25_2299 PF01026 TatD related DNase VpaChn25_2301 PF03144 Elongation factor Tu domain 2 VpaChn25_2301 PF16658 Class II release factor RF3, C-terminal domain VpaChn25_2301 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2302 PF00717 Peptidase S24-like VpaChn25_2302 PF01381 Helix-turn-helix VpaChn25_2309 PF06122 Conjugative relaxosome accessory transposon protein VpaChn25_2313 PF04002 RadC-like JAB domain VpaChn25_2314 PF00092 von Willebrand factor type A domain VpaChn25_2318 PF07728 AAA domain (dynein-related subfamily) VpaChn25_2322 PF00436 Single-strand binding protein family VpaChn25_2325 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_2326 PF00082 Subtilase family VpaChn25_2328 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_2328 PF13361 UvrD-like helicase C-terminal domain VpaChn25_2329 PF06986 Type-1V conjugative transfer system mating pair stabilisation VpaChn25_2330 PF06834 TraU protein VpaChn25_2332 PF10502 Signal peptidase, peptidase S26 VpaChn25_2335 PF10411 Disulfide bond isomerase protein N-terminus VpaChn25_2335 PF13098 Thioredoxin-like domain VpaChn25_2351 PF12008 Type I restriction and modification enzyme - subunit R C terminal VpaChn25_2351 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VpaChn25_2351 PF18766 SWI2/SNF2 ATPase VpaChn25_2353 PF02384 N-6 DNA Methylase VpaChn25_2353 PF12161 HsdM N-terminal domain VpaChn25_2356 PF02811 PHP domain VpaChn25_2356 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VpaChn25_2356 PF00929 Exonuclease VpaChn25_2356 PF11490 DNA polymerase III polC-type N-terminus II VpaChn25_2356 PF07733 Bacterial DNA polymerase III alpha NTPase domain VpaChn25_2356 PF14579 Helix-hairpin-helix motif VpaChn25_2358 PF00717 Peptidase S24-like VpaChn25_2359 PF00817 impB/mucB/samB family VpaChn25_2359 PF13438 Domain of unknown function (DUF4113) VpaChn25_2359 PF11799 impB/mucB/samB family C-terminal domain VpaChn25_2360 PF00809 Pterin binding enzyme VpaChn25_2361 PF01636 Phosphotransferase enzyme family VpaChn25_2362 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase VpaChn25_2364 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_2364 PF02909 Tetracyclin repressor-like, C-terminal domain VpaChn25_2365 PF07690 Major Facilitator Superfamily VpaChn25_2367 PF00186 Dihydrofolate reductase VpaChn25_2370 PF13700 Domain of unknown function (DUF4158) VpaChn25_2370 PF01526 Tn3 transposase DDE domain VpaChn25_2371 PF13438 Domain of unknown function (DUF4113) VpaChn25_2371 PF00817 impB/mucB/samB family VpaChn25_2371 PF11799 impB/mucB/samB family C-terminal domain VpaChn25_2382 PF13508 Acetyltransferase (GNAT) domain VpaChn25_2384 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_2384 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_2384 PF00563 EAL domain VpaChn25_2387 PF01554 MatE VpaChn25_2389 PF07719 Tetratricopeptide repeat VpaChn25_2389 PF13181 Tetratricopeptide repeat VpaChn25_2390 PF00013 KH domain VpaChn25_2390 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VpaChn25_2390 PF00575 S1 RNA binding domain VpaChn25_2390 PF01138 3' exoribonuclease family, domain 1 VpaChn25_2390 PF03725 3' exoribonuclease family, domain 2 VpaChn25_2391 PF00312 Ribosomal protein S15 VpaChn25_2392 PF09157 Pseudouridine synthase II TruB, C-terminal VpaChn25_2392 PF16198 tRNA pseudouridylate synthase B C-terminal domain VpaChn25_2392 PF01509 TruB family pseudouridylate synthase (N terminal domain) VpaChn25_2393 PF02033 Ribosome-binding factor A VpaChn25_2394 PF04760 Translation initiation factor IF-2, N-terminal region VpaChn25_2394 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2394 PF11987 Translation-initiation factor 2 VpaChn25_2394 PF08364 Bacterial translation initiation factor IF-2 associated region VpaChn25_2395 PF13184 NusA-like KH domain VpaChn25_2395 PF08529 NusA N-terminal domain VpaChn25_2395 PF00575 S1 RNA binding domain VpaChn25_2396 PF17384 RimP C-terminal SH3 domain VpaChn25_2396 PF02576 RimP N-terminal domain VpaChn25_2397 PF03840 Preprotein translocase SecG subunit VpaChn25_2398 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VpaChn25_2398 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VpaChn25_2398 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VpaChn25_2398 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VpaChn25_2399 PF00809 Pterin binding enzyme VpaChn25_2400 PF17862 AAA+ lid domain VpaChn25_2400 PF06480 FtsH Extracellular VpaChn25_2400 PF01434 Peptidase family M41 VpaChn25_2400 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_2401 PF01728 FtsJ-like methyltransferase VpaChn25_2402 PF01985 CRS1 / YhbY (CRM) domain VpaChn25_2403 PF03449 Transcription elongation factor, N-terminal VpaChn25_2403 PF01272 Transcription elongation factor, GreA/GreB, C-term VpaChn25_2404 PF13609 Gram-negative porin VpaChn25_2405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VpaChn25_2407 PF00579 tRNA synthetases class I (W and Y) VpaChn25_2408 PF01476 LysM domain VpaChn25_2408 PF08525 Opacity-associated protein A N-terminal motif VpaChn25_2408 PF01551 Peptidase family M23 VpaChn25_2409 PF00873 AcrB/AcrD/AcrF family VpaChn25_2411 PF01521 Iron-sulphur cluster biosynthesis VpaChn25_2412 PF00202 Aminotransferase class-III VpaChn25_2414 PF01594 AI-2E family transporter VpaChn25_2415 PF08468 Methyltransferase small domain N-terminal VpaChn25_2415 PF05175 Methyltransferase small domain VpaChn25_2416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2416 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_2416 PF00072 Response regulator receiver domain VpaChn25_2416 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_2417 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_2418 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_2419 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_2419 PF12911 N-terminal TM domain of oligopeptide transport permease C VpaChn25_2420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_2420 PF00005 ABC transporter VpaChn25_2421 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_2421 PF00005 ABC transporter VpaChn25_2423 PF01869 BadF/BadG/BcrA/BcrD ATPase family VpaChn25_2424 PF02838 Glycosyl hydrolase family 20, domain 2 VpaChn25_2424 PF00728 Glycosyl hydrolase family 20, catalytic domain VpaChn25_2425 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VpaChn25_2425 PF06165 Glycosyltransferase family 36 VpaChn25_2426 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VpaChn25_2426 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VpaChn25_2426 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VpaChn25_2426 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VpaChn25_2427 PF08402 TOBE domain VpaChn25_2427 PF00005 ABC transporter VpaChn25_2429 PF13416 Bacterial extracellular solute-binding protein VpaChn25_2430 PF00909 Ammonium Transporter Family VpaChn25_2431 PF00543 Nitrogen regulatory protein P-II VpaChn25_2432 PF06062 Uncharacterised protein family (UPF0231) VpaChn25_2433 PF11791 Aconitate B N-terminal domain VpaChn25_2433 PF00330 Aconitase family (aconitate hydratase) VpaChn25_2433 PF06434 Aconitate hydratase 2 N-terminus VpaChn25_2434 PF01734 Patatin-like phospholipase VpaChn25_2435 PF00912 Transglycosylase VpaChn25_2435 PF14814 Bifunctional transglycosylase second domain VpaChn25_2435 PF00905 Penicillin binding protein transpeptidase domain VpaChn25_2436 PF00271 Helicase conserved C-terminal domain VpaChn25_2436 PF04408 Helicase associated domain (HA2) VpaChn25_2436 PF00270 DEAD/DEAH box helicase VpaChn25_2436 PF08482 ATP-dependent helicase C-terminal VpaChn25_2437 PF03749 Sugar fermentation stimulation protein RE domain VpaChn25_2437 PF17746 SfsA N-terminal OB domain VpaChn25_2438 PF01258 Prokaryotic dksA/traR C4-type zinc finger VpaChn25_2439 PF00749 tRNA synthetases class I (E and Q), catalytic domain VpaChn25_2440 PF12626 Polymerase A arginine-rich C-terminus VpaChn25_2440 PF01743 Poly A polymerase head domain VpaChn25_2440 PF12627 Probable RNA and SrmB- binding site of polymerase A VpaChn25_2441 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VpaChn25_2442 PF02548 Ketopantoate hydroxymethyltransferase VpaChn25_2443 PF02569 Pantoate-beta-alanine ligase VpaChn25_2444 PF03279 Bacterial lipid A biosynthesis acyltransferase VpaChn25_2445 PF01061 ABC-2 type transporter VpaChn25_2446 PF00005 ABC transporter VpaChn25_2447 PF00916 Sulfate permease family VpaChn25_2447 PF01740 STAS domain VpaChn25_2448 PF00484 Carbonic anhydrase VpaChn25_2449 PF00156 Phosphoribosyl transferase domain VpaChn25_2450 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_2451 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_2451 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VpaChn25_2452 PF00364 Biotin-requiring enzyme VpaChn25_2452 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VpaChn25_2452 PF02817 e3 binding domain VpaChn25_2453 PF17831 Pyruvate dehydrogenase E1 component middle domain VpaChn25_2453 PF00456 Transketolase, thiamine diphosphate binding domain VpaChn25_2454 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_2454 PF07729 FCD domain VpaChn25_2455 PF01510 N-acetylmuramoyl-L-alanine amidase VpaChn25_2456 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VpaChn25_2456 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VpaChn25_2457 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_2458 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VpaChn25_2458 PF00437 Type II/IV secretion system protein VpaChn25_2459 PF00482 Type II secretion system (T2SS), protein F VpaChn25_2460 PF06750 Bacterial Peptidase A24 N-terminal domain VpaChn25_2460 PF01478 Type IV leader peptidase family VpaChn25_2461 PF01121 Dephospho-CoA kinase VpaChn25_2462 PF07072 Cell division protein VpaChn25_2463 PF03884 DNA gyrase inhibitor YacG VpaChn25_2464 PF01245 Ribosomal protein L19 VpaChn25_2465 PF01746 tRNA (Guanine-1)-methyltransferase VpaChn25_2466 PF05239 PRC-barrel domain VpaChn25_2466 PF01782 RimM N-terminal domain VpaChn25_2467 PF00886 Ribosomal protein S16 VpaChn25_2468 PF02881 SRP54-type protein, helical bundle domain VpaChn25_2468 PF02978 Signal peptide binding domain VpaChn25_2468 PF00448 SRP54-type protein, GTPase domain VpaChn25_2469 PF01578 Cytochrome C assembly protein VpaChn25_2470 PF00571 CBS domain VpaChn25_2470 PF01595 Cyclin M transmembrane N-terminal domain VpaChn25_2470 PF03471 Transporter associated domain VpaChn25_2471 PF02664 S-Ribosylhomocysteinase (LuxS) VpaChn25_2473 PF04262 Glutamate-cysteine ligase VpaChn25_2474 PF00675 Insulinase (Peptidase family M16) VpaChn25_2474 PF05193 Peptidase M16 inactive domain VpaChn25_2475 PF09335 SNARE associated Golgi protein VpaChn25_2476 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_2476 PF00107 Zinc-binding dehydrogenase VpaChn25_2477 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VpaChn25_2478 PF02436 Conserved carboxylase domain VpaChn25_2478 PF00364 Biotin-requiring enzyme VpaChn25_2478 PF00682 HMGL-like VpaChn25_2480 PF02599 Global regulator protein family VpaChn25_2481 PF01842 ACT domain VpaChn25_2481 PF00696 Amino acid kinase family VpaChn25_2481 PF13840 ACT domain VpaChn25_2482 PF02272 DHHA1 domain VpaChn25_2482 PF01411 tRNA synthetases class II (A) VpaChn25_2482 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VpaChn25_2483 PF02631 RecX family VpaChn25_2484 PF00154 recA bacterial DNA recombination protein VpaChn25_2485 PF02464 Competence-damaged protein VpaChn25_2486 PF01624 MutS domain I VpaChn25_2486 PF05188 MutS domain II VpaChn25_2486 PF05192 MutS domain III VpaChn25_2486 PF05190 MutS family domain IV VpaChn25_2486 PF00488 MutS domain V VpaChn25_2487 PF04539 Sigma-70 region 3 VpaChn25_2487 PF04542 Sigma-70 region 2 VpaChn25_2487 PF04545 Sigma-70, region 4 VpaChn25_2487 PF00140 Sigma-70 factor, region 1.2 VpaChn25_2488 PF01551 Peptidase family M23 VpaChn25_2488 PF01476 LysM domain VpaChn25_2490 PF01975 Survival protein SurE VpaChn25_2491 PF01142 tRNA pseudouridine synthase D (TruD) VpaChn25_2492 PF02542 YgbB family VpaChn25_2493 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VpaChn25_2494 PF04977 Septum formation initiator VpaChn25_2495 PF03952 Enolase, N-terminal domain VpaChn25_2495 PF00113 Enolase, C-terminal TIM barrel domain VpaChn25_2496 PF06418 CTP synthase N-terminus VpaChn25_2496 PF00117 Glutamine amidotransferase class-I VpaChn25_2497 PF03819 MazG nucleotide pyrophosphohydrolase domain VpaChn25_2498 PF13291 ACT domain VpaChn25_2498 PF02824 TGS domain VpaChn25_2498 PF04607 Region found in RelA / SpoT proteins VpaChn25_2499 PF01938 TRAM domain VpaChn25_2499 PF05958 tRNA (Uracil-5-)-methyltransferase VpaChn25_2500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2500 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_2500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VpaChn25_2500 PF00672 HAMP domain VpaChn25_2500 PF01627 Hpt domain VpaChn25_2500 PF00072 Response regulator receiver domain VpaChn25_2501 PF01648 4'-phosphopantetheinyl transferase superfamily VpaChn25_2502 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VpaChn25_2503 PF11967 Recombination protein O N terminal VpaChn25_2503 PF02565 Recombination protein O C terminal VpaChn25_2504 PF07650 KH domain VpaChn25_2504 PF01926 50S ribosome-binding GTPase VpaChn25_2505 PF14622 Ribonuclease-III-like VpaChn25_2505 PF00035 Double-stranded RNA binding motif VpaChn25_2506 PF10502 Signal peptidase, peptidase S26 VpaChn25_2507 PF03144 Elongation factor Tu domain 2 VpaChn25_2507 PF00679 Elongation factor G C-terminus VpaChn25_2507 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2507 PF06421 GTP-binding protein LepA C-terminus VpaChn25_2509 PF17188 MucB/RseB C-terminal domain VpaChn25_2509 PF03888 MucB/RseB N-terminal domain VpaChn25_2510 PF03872 Anti sigma-E protein RseA, N-terminal domain VpaChn25_2510 PF03873 Anti sigma-E protein RseA, C-terminal domain VpaChn25_2511 PF04542 Sigma-70 region 2 VpaChn25_2511 PF08281 Sigma-70, region 4 VpaChn25_2512 PF00890 FAD binding domain VpaChn25_2512 PF02910 Fumarate reductase flavoprotein C-term VpaChn25_2513 PF03937 Flavinator of succinate dehydrogenase VpaChn25_2514 PF01571 Aminomethyltransferase folate-binding domain VpaChn25_2516 PF01494 FAD binding domain VpaChn25_2517 PF01494 FAD binding domain VpaChn25_2518 PF03695 Uncharacterised protein family (UPF0149) VpaChn25_2519 PF05164 Cell division protein ZapA VpaChn25_2520 PF01812 5-formyltetrahydrofolate cyclo-ligase family VpaChn25_2521 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VpaChn25_2522 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VpaChn25_2522 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VpaChn25_2522 PF01842 ACT domain VpaChn25_2523 PF04402 Protein of unknown function (DUF541) VpaChn25_2524 PF03466 LysR substrate binding domain VpaChn25_2524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2525 PF01810 LysE type translocator VpaChn25_2526 PF04073 Aminoacyl-tRNA editing domain VpaChn25_2527 PF00924 Mechanosensitive ion channel VpaChn25_2527 PF05552 Conserved TM helix VpaChn25_2528 PF01116 Fructose-bisphosphate aldolase class-II VpaChn25_2529 PF00162 Phosphoglycerate kinase VpaChn25_2531 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VpaChn25_2531 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VpaChn25_2532 PF00593 TonB dependent receptor VpaChn25_2532 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_2533 PF03466 LysR substrate binding domain VpaChn25_2533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2534 PF00456 Transketolase, thiamine diphosphate binding domain VpaChn25_2534 PF02779 Transketolase, pyrimidine binding domain VpaChn25_2534 PF02780 Transketolase, C-terminal domain VpaChn25_2535 PF00438 S-adenosylmethionine synthetase, N-terminal domain VpaChn25_2535 PF02773 S-adenosylmethionine synthetase, C-terminal domain VpaChn25_2535 PF02772 S-adenosylmethionine synthetase, central domain VpaChn25_2537 PF17283 SprT-like zinc ribbon domain VpaChn25_2537 PF10263 SprT-like family VpaChn25_2538 PF04231 Endonuclease I VpaChn25_2539 PF04452 RNA methyltransferase VpaChn25_2540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VpaChn25_2540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VpaChn25_2541 PF02622 Uncharacterized ACR, COG1678 VpaChn25_2542 PF03652 Holliday junction resolvase VpaChn25_2543 PF00437 Type II/IV secretion system protein VpaChn25_2544 PF00437 Type II/IV secretion system protein VpaChn25_2545 PF01168 Alanine racemase, N-terminal domain VpaChn25_2546 PF03807 NADP oxidoreductase coenzyme F420-dependent VpaChn25_2546 PF14748 Pyrroline-5-carboxylate reductase dimerisation VpaChn25_2547 PF02325 YGGT family VpaChn25_2548 PF02594 Uncharacterised ACR, YggU family COG1872 VpaChn25_2550 PF01725 Ham1 family VpaChn25_2551 PF04055 Radical SAM superfamily VpaChn25_2551 PF06969 HemN C-terminal domain VpaChn25_2552 PF04960 Glutaminase VpaChn25_2553 PF02086 D12 class N6 adenine-specific DNA methyltransferase VpaChn25_2554 PF02390 Putative methyltransferase VpaChn25_2555 PF00633 Helix-hairpin-helix motif VpaChn25_2555 PF00730 HhH-GPD superfamily base excision DNA repair protein VpaChn25_2555 PF14815 NUDIX domain VpaChn25_2556 PF04362 Bacterial Fe(2+) trafficking VpaChn25_2557 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VpaChn25_2557 PF01464 Transglycosylase SLT domain VpaChn25_2558 PF17200 Single Cache domain 2 VpaChn25_2558 PF00672 HAMP domain VpaChn25_2558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_2559 PF00171 Aldehyde dehydrogenase family VpaChn25_2560 PF00072 Response regulator receiver domain VpaChn25_2561 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_2561 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VpaChn25_2562 PF04794 YdjC-like protein VpaChn25_2563 PF02056 Family 4 glycosyl hydrolase VpaChn25_2563 PF11975 Family 4 glycosyl hydrolase C-terminal domain VpaChn25_2564 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VpaChn25_2565 PF02378 Phosphotransferase system, EIIC VpaChn25_2567 PF01522 Polysaccharide deacetylase VpaChn25_2568 PF00106 short chain dehydrogenase VpaChn25_2569 PF10011 Predicted membrane protein (DUF2254) VpaChn25_2571 PF03739 Lipopolysaccharide export system permease LptF/LptG VpaChn25_2572 PF03739 Lipopolysaccharide export system permease LptF/LptG VpaChn25_2573 PF02789 Cytosol aminopeptidase family, N-terminal domain VpaChn25_2573 PF00883 Cytosol aminopeptidase family, catalytic domain VpaChn25_2574 PF04364 DNA polymerase III chi subunit, HolC VpaChn25_2575 PF00133 tRNA synthetases class I (I, L, M and V) VpaChn25_2575 PF08264 Anticodon-binding domain of tRNA VpaChn25_2575 PF10458 Valyl tRNA synthetase tRNA binding arm VpaChn25_2578 PF00583 Acetyltransferase (GNAT) family VpaChn25_2580 PF06877 Regulator of ribonuclease activity B VpaChn25_2582 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VpaChn25_2582 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VpaChn25_2583 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VpaChn25_2583 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VpaChn25_2584 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VpaChn25_2584 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VpaChn25_2585 PF01042 Endoribonuclease L-PSP VpaChn25_2586 PF01553 Acyltransferase VpaChn25_2587 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VpaChn25_2588 PF01722 BolA-like protein VpaChn25_2589 PF05494 MlaC protein VpaChn25_2590 PF02470 MlaD protein VpaChn25_2591 PF02405 Permease MlaE VpaChn25_2592 PF00005 ABC transporter VpaChn25_2593 PF01699 Sodium/calcium exchanger protein VpaChn25_2594 PF01380 SIS domain VpaChn25_2594 PF00571 CBS domain VpaChn25_2596 PF03968 OstA-like protein VpaChn25_2597 PF12399 Branched-chain amino acid ATP-binding cassette transporter VpaChn25_2597 PF00005 ABC transporter VpaChn25_2598 PF00309 Sigma-54 factor, Activator interacting domain (AID) VpaChn25_2598 PF04963 Sigma-54 factor, core binding domain VpaChn25_2598 PF04552 Sigma-54, DNA binding domain VpaChn25_2599 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VpaChn25_2600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_2601 PF03668 P-loop ATPase protein family VpaChn25_2602 PF00381 PTS HPr component phosphorylation site VpaChn25_2603 PF00571 CBS domain VpaChn25_2603 PF01769 Divalent cation transporter VpaChn25_2603 PF03448 MgtE intracellular N domain VpaChn25_2604 PF01523 Putative modulator of DNA gyrase VpaChn25_2605 PF04751 Protein of unknown function (DUF615) VpaChn25_2606 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VpaChn25_2606 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VpaChn25_2607 PF00849 RNA pseudouridylate synthase VpaChn25_2610 PF12137 RNA polymerase recycling family C-terminal VpaChn25_2610 PF18337 RapA N-terminal Tudor like domain VpaChn25_2610 PF00271 Helicase conserved C-terminal domain VpaChn25_2610 PF18339 RapA N-terminal Tudor like domain 1 VpaChn25_2610 PF00176 SNF2 family N-terminal domain VpaChn25_2612 PF02562 PhoH-like protein VpaChn25_2612 PF13638 PIN domain VpaChn25_2613 PF01523 Putative modulator of DNA gyrase VpaChn25_2614 PF00795 Carbon-nitrogen hydrolase VpaChn25_2615 PF13116 Protein of unknown function VpaChn25_2615 PF13502 AsmA-like C-terminal region VpaChn25_2616 PF00575 S1 RNA binding domain VpaChn25_2616 PF10150 Ribonuclease E/G family VpaChn25_2617 PF02545 Maf-like protein VpaChn25_2618 PF04093 rod shape-determining protein MreD VpaChn25_2619 PF04085 rod shape-determining protein MreC VpaChn25_2627 PF07963 Prokaryotic N-terminal methylation motif VpaChn25_2627 PF00114 Pilin (bacterial filament) VpaChn25_2630 PF00482 Type II secretion system (T2SS), protein F VpaChn25_2631 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VpaChn25_2631 PF00437 Type II/IV secretion system protein VpaChn25_2633 PF01471 Putative peptidoglycan binding domain VpaChn25_2633 PF13401 AAA domain VpaChn25_2634 PF11741 AMIN domain VpaChn25_2634 PF03958 Bacterial type II/III secretion system short domain VpaChn25_2634 PF07660 Secretin and TonB N terminus short domain VpaChn25_2634 PF00263 Bacterial type II and III secretion system protein VpaChn25_2638 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_2638 PF17157 Gammaproteobacterial periplasmic sensor domain VpaChn25_2638 PF00563 EAL domain VpaChn25_2639 PF00436 Single-strand binding protein family VpaChn25_2640 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_2641 PF00483 Nucleotidyl transferase VpaChn25_2642 PF00005 ABC transporter VpaChn25_2642 PF17760 UvrA interaction domain VpaChn25_2642 PF17755 UvrA DNA-binding domain VpaChn25_2644 PF00266 Aminotransferase class-V VpaChn25_2646 PF01842 ACT domain VpaChn25_2646 PF00696 Amino acid kinase family VpaChn25_2647 PF00809 Pterin binding enzyme VpaChn25_2647 PF02574 Homocysteine S-methyltransferase VpaChn25_2647 PF02965 Vitamin B12 dependent methionine synthase, activation domain VpaChn25_2647 PF02607 B12 binding domain VpaChn25_2647 PF02310 B12 binding domain VpaChn25_2648 PF00999 Sodium/hydrogen exchanger family VpaChn25_2650 PF01507 Phosphoadenosine phosphosulfate reductase family VpaChn25_2651 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VpaChn25_2651 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VpaChn25_2652 PF00667 FAD binding domain VpaChn25_2652 PF00258 Flavodoxin VpaChn25_2652 PF00175 Oxidoreductase NAD-binding domain VpaChn25_2655 PF09583 Phage shock protein G (Phageshock_PspG) VpaChn25_2656 PF01207 Dihydrouridine synthase (Dus) VpaChn25_2658 PF01475 Ferric uptake regulator family VpaChn25_2660 PF00342 Phosphoglucose isomerase VpaChn25_2661 PF01894 Uncharacterised protein family UPF0047 VpaChn25_2663 PF00842 Alanine racemase, C-terminal domain VpaChn25_2663 PF01168 Alanine racemase, N-terminal domain VpaChn25_2664 PF03796 DnaB-like helicase C terminal domain VpaChn25_2664 PF00772 DnaB-like helicase N terminal domain VpaChn25_2666 PF01281 Ribosomal protein L9, N-terminal domain VpaChn25_2666 PF03948 Ribosomal protein L9, C-terminal domain VpaChn25_2667 PF01084 Ribosomal protein S18 VpaChn25_2668 PF01250 Ribosomal protein S6 VpaChn25_2669 PF00834 Ribulose-phosphate 3 epimerase family VpaChn25_2670 PF02086 D12 class N6 adenine-specific DNA methyltransferase VpaChn25_2672 PF01761 3-dehydroquinate synthase VpaChn25_2673 PF01202 Shikimate kinase VpaChn25_2674 PF07660 Secretin and TonB N terminus short domain VpaChn25_2674 PF03958 Bacterial type II/III secretion system short domain VpaChn25_2674 PF00263 Bacterial type II and III secretion system protein VpaChn25_2674 PF11741 AMIN domain VpaChn25_2679 PF00905 Penicillin binding protein transpeptidase domain VpaChn25_2679 PF00912 Transglycosylase VpaChn25_2679 PF17092 Penicillin-binding protein OB-like domain VpaChn25_2680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2680 PF03466 LysR substrate binding domain VpaChn25_2681 PF08534 Redoxin VpaChn25_2681 PF00462 Glutaredoxin VpaChn25_2683 PF14698 Argininosuccinate lyase C-terminal VpaChn25_2683 PF00583 Acetyltransferase (GNAT) family VpaChn25_2683 PF00206 Lyase VpaChn25_2684 PF00764 Arginosuccinate synthase VpaChn25_2685 PF00696 Amino acid kinase family VpaChn25_2686 PF01118 Semialdehyde dehydrogenase, NAD binding domain VpaChn25_2686 PF02774 Semialdehyde dehydrogenase, dimerisation domain VpaChn25_2687 PF07687 Peptidase dimerisation domain VpaChn25_2687 PF01546 Peptidase family M20/M25/M40 VpaChn25_2688 PF00311 Phosphoenolpyruvate carboxylase VpaChn25_2690 PF02219 Methylenetetrahydrofolate reductase VpaChn25_2691 PF00696 Amino acid kinase family VpaChn25_2691 PF03447 Homoserine dehydrogenase, NAD binding domain VpaChn25_2691 PF00742 Homoserine dehydrogenase VpaChn25_2692 PF01053 Cys/Met metabolism PLP-dependent enzyme VpaChn25_2693 PF01340 Met Apo-repressor, MetJ VpaChn25_2694 PF03949 Malic enzyme, NAD binding domain VpaChn25_2694 PF00390 Malic enzyme, N-terminal domain VpaChn25_2695 PF00210 Ferritin-like domain VpaChn25_2696 PF03144 Elongation factor Tu domain 2 VpaChn25_2696 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2696 PF03143 Elongation factor Tu C-terminal domain VpaChn25_2697 PF03764 Elongation factor G, domain IV VpaChn25_2697 PF00679 Elongation factor G C-terminus VpaChn25_2697 PF03144 Elongation factor Tu domain 2 VpaChn25_2697 PF14492 Elongation Factor G, domain II VpaChn25_2697 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2698 PF00177 Ribosomal protein S7p/S5e VpaChn25_2699 PF00164 Ribosomal protein S12/S23 VpaChn25_2700 PF04077 DsrH like protein VpaChn25_2701 PF02635 DsrE/DsrF-like family VpaChn25_2702 PF02635 DsrE/DsrF-like family VpaChn25_2703 PF08348 YheO-like PAS domain VpaChn25_2703 PF13309 HTH domain VpaChn25_2704 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_2704 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VpaChn25_2706 PF04102 SlyX VpaChn25_2707 PF01112 Asparaginase VpaChn25_2708 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_2710 PF00999 Sodium/hydrogen exchanger family VpaChn25_2710 PF02254 TrkA-N domain VpaChn25_2711 PF02525 Flavodoxin-like fold VpaChn25_2712 PF12848 ABC transporter VpaChn25_2712 PF00005 ABC transporter VpaChn25_2714 PF00561 alpha/beta hydrolase fold VpaChn25_2715 PF06794 Uncharacterised protein family (UPF0270) VpaChn25_2716 PF00485 Phosphoribulokinase / Uridine kinase family VpaChn25_2717 PF13545 Crp-like helix-turn-helix domain VpaChn25_2717 PF00027 Cyclic nucleotide-binding domain VpaChn25_2719 PF00171 Aldehyde dehydrogenase family VpaChn25_2720 PF04958 Arginine N-succinyltransferase beta subunit VpaChn25_2721 PF00202 Aminotransferase class-III VpaChn25_2723 PF00117 Glutamine amidotransferase class-I VpaChn25_2726 PF00579 tRNA synthetases class I (W and Y) VpaChn25_2727 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_2728 PF00588 SpoU rRNA Methylase family VpaChn25_2728 PF08032 RNA 2'-O ribose methyltransferase substrate binding VpaChn25_2729 PF00575 S1 RNA binding domain VpaChn25_2729 PF00773 RNB domain VpaChn25_2729 PF08206 Ribonuclease B OB domain VpaChn25_2729 PF08461 Ribonuclease R winged-helix domain VpaChn25_2729 PF17876 Cold shock domain VpaChn25_2730 PF02082 Transcriptional regulator VpaChn25_2731 PF00970 Oxidoreductase FAD-binding domain VpaChn25_2731 PF00042 Globin VpaChn25_2731 PF00175 Oxidoreductase NAD-binding domain VpaChn25_2732 PF08238 Sel1 repeat VpaChn25_2733 PF00709 Adenylosuccinate synthetase VpaChn25_2734 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VpaChn25_2735 PF01145 SPFH domain / Band 7 family VpaChn25_2736 PF12221 Bacterial membrane protein N terminal VpaChn25_2736 PF01145 SPFH domain / Band 7 family VpaChn25_2737 PF16360 GTP-binding GTPase Middle Region VpaChn25_2737 PF13167 GTP-binding GTPase N-terminal VpaChn25_2737 PF01926 50S ribosome-binding GTPase VpaChn25_2738 PF17209 Hfq protein VpaChn25_2740 PF01119 DNA mismatch repair protein, C-terminal domain VpaChn25_2740 PF08676 MutL C terminal dimerisation domain VpaChn25_2741 PF01520 N-acetylmuramoyl-L-alanine amidase VpaChn25_2742 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VpaChn25_2743 PF08331 Domain of unknown function (DUF1730) VpaChn25_2744 PF00929 Exonuclease VpaChn25_2745 PF03193 RsgA GTPase VpaChn25_2746 PF02666 Phosphatidylserine decarboxylase VpaChn25_2747 PF00939 Sodium:sulfate symporter transmembrane region VpaChn25_2749 PF00672 HAMP domain VpaChn25_2749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_2751 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VpaChn25_2751 PF01676 Metalloenzyme superfamily VpaChn25_2753 PF00581 Rhodanese-like domain VpaChn25_2754 PF02556 Preprotein translocase subunit SecB VpaChn25_2755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VpaChn25_2755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VpaChn25_2756 PF06426 Serine acetyltransferase, N-terminal VpaChn25_2756 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_2757 PF01551 Peptidase family M23 VpaChn25_2759 PF08360 QacR-like protein, C-terminal region VpaChn25_2759 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_2761 PF00152 tRNA synthetases class II (D, K and N) VpaChn25_2762 PF00890 FAD binding domain VpaChn25_2762 PF02910 Fumarate reductase flavoprotein C-term VpaChn25_2763 PF13183 4Fe-4S dicluster domain VpaChn25_2763 PF13085 2Fe-2S iron-sulfur cluster binding domain VpaChn25_2764 PF02300 Fumarate reductase subunit C VpaChn25_2765 PF02313 Fumarate reductase subunit D VpaChn25_2767 PF09285 Elongation factor P, C-terminal VpaChn25_2767 PF01132 Elongation factor P (EF-P) OB domain VpaChn25_2767 PF08207 Elongation factor P (EF-P) KOW-like domain VpaChn25_2768 PF04055 Radical SAM superfamily VpaChn25_2770 PF00842 Alanine racemase, C-terminal domain VpaChn25_2770 PF01168 Alanine racemase, N-terminal domain VpaChn25_2771 PF02308 MgtC family VpaChn25_2773 PF00118 TCP-1/cpn60 chaperonin family VpaChn25_2774 PF00166 Chaperonin 10 Kd subunit VpaChn25_2775 PF01554 MatE VpaChn25_2776 PF00365 Phosphofructokinase VpaChn25_2777 PF01545 Cation efflux family VpaChn25_2777 PF16916 Dimerisation domain of Zinc Transporter VpaChn25_2778 PF07813 LTXXQ motif family protein VpaChn25_2779 PF00072 Response regulator receiver domain VpaChn25_2779 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_2780 PF16527 Two-component sensor protein CpxA, periplasmic domain VpaChn25_2780 PF00672 HAMP domain VpaChn25_2780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2780 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_2781 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VpaChn25_2781 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VpaChn25_2782 PF00588 SpoU rRNA Methylase family VpaChn25_2783 PF04186 FxsA cytoplasmic membrane protein VpaChn25_2784 PF10415 Fumarase C C-terminus VpaChn25_2784 PF00206 Lyase VpaChn25_2785 PF03605 Anaerobic c4-dicarboxylate membrane transporter VpaChn25_2786 PF11412 Disulphide bond corrector protein DsbC VpaChn25_2786 PF02683 Cytochrome C biogenesis protein transmembrane region VpaChn25_2787 PF00072 Response regulator receiver domain VpaChn25_2787 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_2788 PF02080 TrkA-C domain VpaChn25_2788 PF00999 Sodium/hydrogen exchanger family VpaChn25_2788 PF03471 Transporter associated domain VpaChn25_2790 PF00474 Sodium:solute symporter family VpaChn25_2793 PF00206 Lyase VpaChn25_2793 PF10415 Fumarase C C-terminus VpaChn25_2794 PF00072 Response regulator receiver domain VpaChn25_2794 PF09308 LuxQ, periplasmic VpaChn25_2794 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_2794 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_2795 PF12832 MFS_1 like family VpaChn25_2798 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_2798 PF00501 AMP-binding enzyme VpaChn25_2798 PF16177 Acetyl-coenzyme A synthetase N-terminus VpaChn25_2799 PF01220 Dehydroquinase class II VpaChn25_2800 PF00364 Biotin-requiring enzyme VpaChn25_2801 PF02785 Biotin carboxylase C-terminal domain VpaChn25_2801 PF00289 Biotin carboxylase, N-terminal domain VpaChn25_2801 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VpaChn25_2803 PF01207 Dihydrouridine synthase (Dus) VpaChn25_2804 PF02954 Bacterial regulatory protein, Fis family VpaChn25_2805 PF07690 Major Facilitator Superfamily VpaChn25_2806 PF00005 ABC transporter VpaChn25_2806 PF12848 ABC transporter VpaChn25_2807 PF05230 MASE2 domain VpaChn25_2807 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_2809 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VpaChn25_2809 PF01276 Orn/Lys/Arg decarboxylase, major domain VpaChn25_2809 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VpaChn25_2810 PF13520 Amino acid permease VpaChn25_2811 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_2811 PF18500 CadC C-terminal domain 1 VpaChn25_2813 PF13411 MerR HTH family regulatory protein VpaChn25_2815 PF02142 MGS-like domain VpaChn25_2815 PF01808 AICARFT/IMPCHase bienzyme VpaChn25_2816 PF02843 Phosphoribosylglycinamide synthetase, C domain VpaChn25_2816 PF02844 Phosphoribosylglycinamide synthetase, N domain VpaChn25_2816 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VpaChn25_2818 PF00216 Bacterial DNA-binding protein VpaChn25_2819 PF00571 CBS domain VpaChn25_2819 PF01595 Cyclin M transmembrane N-terminal domain VpaChn25_2820 PF04222 Protein of unknown function (DUF416) VpaChn25_2821 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VpaChn25_2822 PF03167 Uracil DNA glycosylase superfamily VpaChn25_2823 PF01208 Uroporphyrinogen decarboxylase (URO-D) VpaChn25_2826 PF00293 NUDIX domain VpaChn25_2826 PF09297 NADH pyrophosphatase zinc ribbon domain VpaChn25_2827 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VpaChn25_2828 PF00623 RNA polymerase Rpb1, domain 2 VpaChn25_2828 PF04997 RNA polymerase Rpb1, domain 1 VpaChn25_2828 PF04983 RNA polymerase Rpb1, domain 3 VpaChn25_2828 PF05000 RNA polymerase Rpb1, domain 4 VpaChn25_2828 PF04998 RNA polymerase Rpb1, domain 5 VpaChn25_2829 PF04561 RNA polymerase Rpb2, domain 2 VpaChn25_2829 PF04563 RNA polymerase beta subunit VpaChn25_2829 PF10385 RNA polymerase beta subunit external 1 domain VpaChn25_2829 PF00562 RNA polymerase Rpb2, domain 6 VpaChn25_2829 PF04560 RNA polymerase Rpb2, domain 7 VpaChn25_2829 PF04565 RNA polymerase Rpb2, domain 3 VpaChn25_2830 PF16320 Ribosomal protein L7/L12 dimerisation domain VpaChn25_2830 PF00542 Ribosomal protein L7/L12 C-terminal domain VpaChn25_2831 PF00466 Ribosomal protein L10 VpaChn25_2832 PF00687 Ribosomal protein L1p/L10e family VpaChn25_2833 PF00298 Ribosomal protein L11, RNA binding domain VpaChn25_2833 PF03946 Ribosomal protein L11, N-terminal domain VpaChn25_2834 PF02357 Transcription termination factor nusG VpaChn25_2834 PF00467 KOW motif VpaChn25_2835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VpaChn25_2836 PF00009 Elongation factor Tu GTP binding domain VpaChn25_2836 PF03144 Elongation factor Tu domain 2 VpaChn25_2836 PF03143 Elongation factor Tu C-terminal domain VpaChn25_2837 PF00485 Phosphoribulokinase / Uridine kinase family VpaChn25_2838 PF08279 HTH domain VpaChn25_2838 PF02237 Biotin protein ligase C terminal domain VpaChn25_2838 PF03099 Biotin/lipoate A/B protein ligase family VpaChn25_2839 PF01565 FAD binding domain VpaChn25_2839 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VpaChn25_2841 PF13091 PLD-like domain VpaChn25_2843 PF01177 Asp/Glu/Hydantoin racemase VpaChn25_2845 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_2845 PF00593 TonB dependent receptor VpaChn25_2846 PF05958 tRNA (Uracil-5-)-methyltransferase VpaChn25_2848 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_2849 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VpaChn25_2849 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_2850 PF01554 MatE VpaChn25_2851 PF04072 Leucine carboxyl methyltransferase VpaChn25_2852 PF01726 LexA DNA binding domain VpaChn25_2852 PF00717 Peptidase S24-like VpaChn25_2853 PF01553 Acyltransferase VpaChn25_2854 PF01040 UbiA prenyltransferase family VpaChn25_2855 PF04345 Chorismate lyase VpaChn25_2856 PF03748 Flagellar basal body-associated protein FliL VpaChn25_2857 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VpaChn25_2857 PF01694 Rhomboid family VpaChn25_2858 PF00581 Rhodanese-like domain VpaChn25_2859 PF04542 Sigma-70 region 2 VpaChn25_2859 PF04545 Sigma-70, region 4 VpaChn25_2859 PF00140 Sigma-70 factor, region 1.2 VpaChn25_2860 PF18075 FtsX extracellular domain VpaChn25_2861 PF00005 ABC transporter VpaChn25_2862 PF00448 SRP54-type protein, GTPase domain VpaChn25_2862 PF02881 SRP54-type protein, helical bundle domain VpaChn25_2865 PF01914 MarC family integral membrane protein VpaChn25_2876 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VpaChn25_2876 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VpaChn25_2877 PF01022 Bacterial regulatory protein, arsR family VpaChn25_2878 PF00563 EAL domain VpaChn25_2878 PF08668 HDOD domain VpaChn25_2879 PF01810 LysE type translocator VpaChn25_2880 PF12146 Serine aminopeptidase, S33 VpaChn25_2885 PF08495 FIST N domain VpaChn25_2885 PF10442 FIST C domain VpaChn25_2885 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_2885 PF00563 EAL domain VpaChn25_2886 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_2887 PF00589 Phage integrase family VpaChn25_2887 PF02899 Phage integrase, N-terminal SAM-like domain VpaChn25_2889 PF01678 Diaminopimelate epimerase VpaChn25_2890 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VpaChn25_2890 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VpaChn25_2892 PF01491 Frataxin-like domain VpaChn25_2893 PF01295 Adenylate cyclase, class-I VpaChn25_2893 PF12633 Adenylate cyclase NT domain VpaChn25_2894 PF03900 Porphobilinogen deaminase, C-terminal domain VpaChn25_2894 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VpaChn25_2895 PF02602 Uroporphyrinogen-III synthase HemD VpaChn25_2896 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VpaChn25_2897 PF07219 HemY protein N-terminus VpaChn25_2898 PF00175 Oxidoreductase NAD-binding domain VpaChn25_2899 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_2900 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VpaChn25_2902 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_2902 PF07498 Rho termination factor, N-terminal domain VpaChn25_2902 PF07497 Rho termination factor, RNA-binding domain VpaChn25_2903 PF00085 Thioredoxin VpaChn25_2904 PF00271 Helicase conserved C-terminal domain VpaChn25_2904 PF00270 DEAD/DEAH box helicase VpaChn25_2905 PF02541 Ppx/GppA phosphatase family VpaChn25_2906 PF02592 Putative vitamin uptake transporter VpaChn25_2908 PF09382 RQC domain VpaChn25_2908 PF16124 RecQ zinc-binding VpaChn25_2908 PF00570 HRDC domain VpaChn25_2908 PF00271 Helicase conserved C-terminal domain VpaChn25_2908 PF00270 DEAD/DEAH box helicase VpaChn25_2909 PF00892 EamA-like transporter family VpaChn25_2911 PF01810 LysE type translocator VpaChn25_2913 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_2913 PF13361 UvrD-like helicase C-terminal domain VpaChn25_2915 PF05114 Protein of unknown function (DUF692) VpaChn25_2919 PF07690 Major Facilitator Superfamily VpaChn25_2920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2920 PF03466 LysR substrate binding domain VpaChn25_2921 PF01321 Creatinase/Prolidase N-terminal domain VpaChn25_2921 PF00557 Metallopeptidase family M24 VpaChn25_2921 PF00557 Metallopeptidase family M24 VpaChn25_2921 PF01321 Creatinase/Prolidase N-terminal domain VpaChn25_2922 PF06968 Biotin and Thiamin Synthesis associated domain VpaChn25_2922 PF04055 Radical SAM superfamily VpaChn25_2923 PF05690 Thiazole biosynthesis protein ThiG VpaChn25_2924 PF02597 ThiS family VpaChn25_2925 PF00899 ThiF family VpaChn25_2926 PF02581 Thiamine monophosphate synthase VpaChn25_2927 PF13667 ThiC-associated domain VpaChn25_2927 PF01964 Radical SAM ThiC family VpaChn25_2928 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VpaChn25_2930 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_2931 PF07369 Protein of unknown function (DUF1488) VpaChn25_2932 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VpaChn25_2932 PF01488 Shikimate / quinate 5-dehydrogenase VpaChn25_2932 PF08501 Shikimate dehydrogenase substrate binding domain VpaChn25_2933 PF01218 Coproporphyrinogen III oxidase VpaChn25_2934 PF01300 Telomere recombination VpaChn25_2935 PF00731 AIR carboxylase VpaChn25_2936 PF02222 ATP-grasp domain VpaChn25_2936 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VpaChn25_2937 PF01396 Topoisomerase DNA binding C4 zinc finger VpaChn25_2938 PF04361 Protein of unknown function (DUF494) VpaChn25_2939 PF02481 DNA recombination-mediator protein A VpaChn25_2939 PF17782 DprA winged helix domain VpaChn25_2941 PF01327 Polypeptide deformylase VpaChn25_2942 PF02911 Formyl transferase, C-terminal domain VpaChn25_2942 PF00551 Formyl transferase VpaChn25_2943 PF01189 16S rRNA methyltransferase RsmB/F VpaChn25_2943 PF01029 NusB family VpaChn25_2944 PF02254 TrkA-N domain VpaChn25_2944 PF02080 TrkA-C domain VpaChn25_2945 PF02386 Cation transport protein VpaChn25_2947 PF03006 Haemolysin-III related VpaChn25_2948 PF07070 SpoOM protein VpaChn25_2951 PF06288 Protein of unknown function (DUF1040) VpaChn25_2952 PF12801 4Fe-4S binding domain VpaChn25_2952 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VpaChn25_2952 PF13746 4Fe-4S dicluster domain VpaChn25_2953 PF01636 Phosphotransferase enzyme family VpaChn25_2954 PF01323 DSBA-like thioredoxin domain VpaChn25_2955 PF01553 Acyltransferase VpaChn25_2957 PF13335 Magnesium chelatase, subunit ChlI C-terminal VpaChn25_2957 PF01078 Magnesium chelatase, subunit ChlI VpaChn25_2958 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VpaChn25_2958 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VpaChn25_2958 PF00205 Thiamine pyrophosphate enzyme, central domain VpaChn25_2960 PF01063 Amino-transferase class IV VpaChn25_2961 PF00920 Dehydratase family VpaChn25_2962 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_2962 PF00585 C-terminal regulatory domain of Threonine dehydratase VpaChn25_2963 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_2963 PF03466 LysR substrate binding domain VpaChn25_2964 PF07690 Major Facilitator Superfamily VpaChn25_2965 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_2966 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_2967 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_2967 PF12804 MobA-like NTP transferase domain VpaChn25_2968 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VpaChn25_2968 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VpaChn25_2969 PF02874 ATP synthase alpha/beta family, beta-barrel domain VpaChn25_2969 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_2970 PF00231 ATP synthase VpaChn25_2971 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_2971 PF00306 ATP synthase alpha/beta chain, C terminal domain VpaChn25_2971 PF02874 ATP synthase alpha/beta family, beta-barrel domain VpaChn25_2972 PF00213 ATP synthase delta (OSCP) subunit VpaChn25_2973 PF00430 ATP synthase B/B' CF(0) VpaChn25_2974 PF00137 ATP synthase subunit C VpaChn25_2975 PF00119 ATP synthase A chain VpaChn25_2976 PF03899 ATP synthase I chain VpaChn25_2977 PF02195 ParB-like nuclease domain VpaChn25_2977 PF17762 HTH domain found in ParB protein VpaChn25_2978 PF13614 AAA domain VpaChn25_2979 PF02527 rRNA small subunit methyltransferase G VpaChn25_2980 PF01134 Glucose inhibited division protein A VpaChn25_2980 PF13932 GidA associated domain VpaChn25_2981 PF00258 Flavodoxin VpaChn25_2982 PF10396 GTP-binding protein TrmE N-terminus VpaChn25_2982 PF12631 MnmE helical domain VpaChn25_2982 PF01926 50S ribosome-binding GTPase VpaChn25_2983 PF02096 60Kd inner membrane protein VpaChn25_2983 PF14849 YidC periplasmic domain VpaChn25_2984 PF00825 Ribonuclease P VpaChn25_2985 PF00468 Ribosomal protein L34 VpaChn25_2986 PF00005 ABC transporter VpaChn25_2987 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_2988 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_A0004 PF00005 ABC transporter VpaChn25_A0004 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_A0005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_A0005 PF00005 ABC transporter VpaChn25_A0007 PF08719 Domain of unknown function (DUF1768) VpaChn25_A0007 PF00925 GTP cyclohydrolase II VpaChn25_A0009 PF00072 Response regulator receiver domain VpaChn25_A0009 PF01627 Hpt domain VpaChn25_A0009 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0009 PF00672 HAMP domain VpaChn25_A0009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0009 PF17149 Periplasmic sensor domain found in signal transduction proteins VpaChn25_A0011 PF01709 Transcriptional regulator VpaChn25_A0012 PF01098 Cell cycle protein VpaChn25_A0015 PF00005 ABC transporter VpaChn25_A0019 PF06580 Histidine kinase VpaChn25_A0019 PF13492 GAF domain VpaChn25_A0019 PF07694 5TMR of 5TMR-LYT VpaChn25_A0019 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0020 PF00072 Response regulator receiver domain VpaChn25_A0020 PF04397 LytTr DNA-binding domain VpaChn25_A0022 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VpaChn25_A0023 PF00672 HAMP domain VpaChn25_A0023 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0023 PF17200 Single Cache domain 2 VpaChn25_A0026 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_A0027 PF03616 Sodium/glutamate symporter VpaChn25_A0029 PF00005 ABC transporter VpaChn25_A0030 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0030 PF00155 Aminotransferase class I and II VpaChn25_A0031 PF03616 Sodium/glutamate symporter VpaChn25_A0033 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VpaChn25_A0036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0036 PF03466 LysR substrate binding domain VpaChn25_A0037 PF17954 Quercetinase C-terminal cupin domain VpaChn25_A0037 PF02678 Pirin VpaChn25_A0038 PF07681 DoxX VpaChn25_A0040 PF06029 AlkA N-terminal domain VpaChn25_A0040 PF00730 HhH-GPD superfamily base excision DNA repair protein VpaChn25_A0041 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VpaChn25_A0041 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VpaChn25_A0043 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VpaChn25_A0045 PF03600 Citrate transporter VpaChn25_A0050 PF08329 Chitinase A, N-terminal domain VpaChn25_A0050 PF00704 Glycosyl hydrolases family 18 VpaChn25_A0052 PF06865 Pyrimidine/purine nucleoside phosphorylase VpaChn25_A0054 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0054 PF00563 EAL domain VpaChn25_A0056 PF01554 MatE VpaChn25_A0057 PF00849 RNA pseudouridylate synthase VpaChn25_A0060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0060 PF03466 LysR substrate binding domain VpaChn25_A0063 PF17152 Periplasmic sensor domain VpaChn25_A0063 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0065 PF00756 Putative esterase VpaChn25_A0066 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_A0066 PF00107 Zinc-binding dehydrogenase VpaChn25_A0067 PF00797 N-acetyltransferase VpaChn25_A0068 PF03466 LysR substrate binding domain VpaChn25_A0068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0071 PF09339 IclR helix-turn-helix domain VpaChn25_A0071 PF01614 Bacterial transcriptional regulator VpaChn25_A0073 PF10688 Bacterial inner membrane protein VpaChn25_A0074 PF07883 Cupin domain VpaChn25_A0077 PF00294 pfkB family carbohydrate kinase VpaChn25_A0078 PF01081 KDPG and KHG aldolase VpaChn25_A0081 PF13229 Right handed beta helix region VpaChn25_A0082 PF00474 Sodium:solute symporter family VpaChn25_A0083 PF14583 Oligogalacturonate lyase VpaChn25_A0084 PF04954 Siderophore-interacting protein VpaChn25_A0084 PF08021 Siderophore-interacting FAD-binding domain VpaChn25_A0085 PF01810 LysE type translocator VpaChn25_A0086 PF01037 Lrp/AsnC ligand binding domain VpaChn25_A0087 PF18416 N-acetylglucosamine binding protein domain 2 VpaChn25_A0087 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VpaChn25_A0090 PF13599 Pentapeptide repeats (9 copies) VpaChn25_A0091 PF03922 OmpW family VpaChn25_A0092 PF13533 Biotin-lipoyl like VpaChn25_A0093 PF07690 Major Facilitator Superfamily VpaChn25_A0095 PF12706 Beta-lactamase superfamily domain VpaChn25_A0097 PF01204 Trehalase VpaChn25_A0098 PF01661 Macro domain VpaChn25_A0099 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_A0100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0100 PF03466 LysR substrate binding domain VpaChn25_A0102 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0102 PF03466 LysR substrate binding domain VpaChn25_A0105 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A0110 PF05651 Putative sugar diacid recognition VpaChn25_A0110 PF17853 GGDEF-like domain VpaChn25_A0110 PF13556 PucR C-terminal helix-turn-helix domain VpaChn25_A0111 PF02447 GntP family permease VpaChn25_A0112 PF02595 Glycerate kinase family VpaChn25_A0113 PF00155 Aminotransferase class I and II VpaChn25_A0113 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0117 PF00583 Acetyltransferase (GNAT) family VpaChn25_A0122 PF03264 NapC/NirT cytochrome c family, N-terminal region VpaChn25_A0123 PF00384 Molybdopterin oxidoreductase VpaChn25_A0123 PF18364 Molybdopterin oxidoreductase N-terminal domain VpaChn25_A0123 PF01568 Molydopterin dinucleotide binding domain VpaChn25_A0125 PF02581 Thiamine monophosphate synthase VpaChn25_A0126 PF02110 Hydroxyethylthiazole kinase family VpaChn25_A0127 PF03070 TENA/THI-4/PQQC family VpaChn25_A0128 PF09084 NMT1/THI5 like VpaChn25_A0129 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0130 PF00005 ABC transporter VpaChn25_A0131 PF08543 Phosphomethylpyrimidine kinase VpaChn25_A0132 PF01523 Putative modulator of DNA gyrase VpaChn25_A0133 PF01523 Putative modulator of DNA gyrase VpaChn25_A0134 PF04013 Putative SAM-dependent RNA methyltransferase VpaChn25_A0144 PF10928 Protein of unknown function (DUF2810) VpaChn25_A0145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VpaChn25_A0145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VpaChn25_A0147 PF03009 Glycerophosphoryl diester phosphodiesterase family VpaChn25_A0149 PF00072 Response regulator receiver domain VpaChn25_A0149 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A0150 PF00672 HAMP domain VpaChn25_A0150 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0150 PF16750 Sensor domain of 2-component histidine kinase VpaChn25_A0150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0151 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A0151 PF00593 TonB dependent receptor VpaChn25_A0153 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_A0154 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_A0155 PF02472 Biopolymer transport protein ExbD/TolR VpaChn25_A0164 PF01297 Zinc-uptake complex component A periplasmic VpaChn25_A0165 PF00005 ABC transporter VpaChn25_A0166 PF00950 ABC 3 transport family VpaChn25_A0169 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VpaChn25_A0169 PF00326 Prolyl oligopeptidase family VpaChn25_A0170 PF07690 Major Facilitator Superfamily VpaChn25_A0171 PF00491 Arginase family VpaChn25_A0172 PF17944 Arginine decarboxylase C-terminal helical extension VpaChn25_A0172 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VpaChn25_A0172 PF17810 Arginine decarboxylase helical bundle domain VpaChn25_A0173 PF00753 Metallo-beta-lactamase superfamily VpaChn25_A0174 PF08443 RimK-like ATP-grasp domain VpaChn25_A0174 PF18030 RimK PreATP-grasp domain VpaChn25_A0175 PF08443 RimK-like ATP-grasp domain VpaChn25_A0175 PF18030 RimK PreATP-grasp domain VpaChn25_A0177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0177 PF03466 LysR substrate binding domain VpaChn25_A0182 PF00232 Glycosyl hydrolase family 1 VpaChn25_A0184 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0184 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0185 PF02954 Bacterial regulatory protein, Fis family VpaChn25_A0185 PF00158 Sigma-54 interaction domain VpaChn25_A0185 PF00072 Response regulator receiver domain VpaChn25_A0186 PF05230 MASE2 domain VpaChn25_A0186 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0187 PF05525 Branched-chain amino acid transport protein VpaChn25_A0191 PF01266 FAD dependent oxidoreductase VpaChn25_A0193 PF01212 Beta-eliminating lyase VpaChn25_A0195 PF07670 Nucleoside recognition VpaChn25_A0195 PF07662 Na+ dependent nucleoside transporter C-terminus VpaChn25_A0195 PF01773 Na+ dependent nucleoside transporter N-terminus VpaChn25_A0197 PF13532 2OG-Fe(II) oxygenase superfamily VpaChn25_A0198 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0198 PF05230 MASE2 domain VpaChn25_A0199 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0199 PF00672 HAMP domain VpaChn25_A0199 PF12729 Four helix bundle sensory module for signal transduction VpaChn25_A0202 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0203 PF03441 FAD binding domain of DNA photolyase VpaChn25_A0203 PF00875 DNA photolyase VpaChn25_A0204 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VpaChn25_A0205 PF04055 Radical SAM superfamily VpaChn25_A0205 PF00919 Uncharacterized protein family UPF0004 VpaChn25_A0207 PF01625 Peptide methionine sulfoxide reductase VpaChn25_A0207 PF01641 SelR domain VpaChn25_A0208 PF02566 OsmC-like protein VpaChn25_A0209 PF12464 Maltose acetyltransferase VpaChn25_A0209 PF14602 Hexapeptide repeat of succinyl-transferase VpaChn25_A0216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0216 PF03466 LysR substrate binding domain VpaChn25_A0217 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A0220 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VpaChn25_A0221 PF00194 Eukaryotic-type carbonic anhydrase VpaChn25_A0222 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VpaChn25_A0223 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_A0224 PF02687 FtsX-like permease family VpaChn25_A0224 PF00005 ABC transporter VpaChn25_A0224 PF12704 MacB-like periplasmic core domain VpaChn25_A0225 PF02321 Outer membrane efflux protein VpaChn25_A0226 PF00657 GDSL-like Lipase/Acylhydrolase VpaChn25_A0227 PF00657 GDSL-like Lipase/Acylhydrolase VpaChn25_A0230 PF03611 PTS system sugar-specific permease component VpaChn25_A0232 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_A0233 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_A0234 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A0236 PF00266 Aminotransferase class-V VpaChn25_A0239 PF00005 ABC transporter VpaChn25_A0240 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0241 PF07702 UTRA domain VpaChn25_A0241 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0244 PF04393 Protein of unknown function (DUF535) VpaChn25_A0247 PF01266 FAD dependent oxidoreductase VpaChn25_A0248 PF18027 Cytosolic carboxypeptidase N-terminal domain VpaChn25_A0248 PF00246 Zinc carboxypeptidase VpaChn25_A0249 PF01389 OmpA-like transmembrane domain VpaChn25_A0249 PF00691 OmpA family VpaChn25_A0250 PF03466 LysR substrate binding domain VpaChn25_A0250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0252 PF03466 LysR substrate binding domain VpaChn25_A0252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0254 PF00854 POT family VpaChn25_A0256 PF03313 Serine dehydratase alpha chain VpaChn25_A0256 PF03315 Serine dehydratase beta chain VpaChn25_A0260 PF08264 Anticodon-binding domain of tRNA VpaChn25_A0260 PF00133 tRNA synthetases class I (I, L, M and V) VpaChn25_A0261 PF01464 Transglycosylase SLT domain VpaChn25_A0265 PF00460 Flagella basal body rod protein VpaChn25_A0266 PF00460 Flagella basal body rod protein VpaChn25_A0266 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_A0267 PF13860 FlgD Ig-like domain VpaChn25_A0267 PF13861 FlgD Tudor-like domain VpaChn25_A0267 PF03963 Flagellar hook capping protein - N-terminal region VpaChn25_A0268 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_A0268 PF07559 Flagellar basal body protein FlaE VpaChn25_A0268 PF00460 Flagella basal body rod protein VpaChn25_A0269 PF00460 Flagella basal body rod protein VpaChn25_A0269 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_A0270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_A0270 PF00460 Flagella basal body rod protein VpaChn25_A0271 PF02107 Flagellar L-ring protein VpaChn25_A0272 PF02119 Flagellar P-ring protein VpaChn25_A0273 PF10135 Rod binding protein VpaChn25_A0273 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VpaChn25_A0274 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VpaChn25_A0274 PF00460 Flagella basal body rod protein VpaChn25_A0275 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_A0279 PF01070 FMN-dependent dehydrogenase VpaChn25_A0285 PF00581 Rhodanese-like domain VpaChn25_A0286 PF00166 Chaperonin 10 Kd subunit VpaChn25_A0287 PF00118 TCP-1/cpn60 chaperonin family VpaChn25_A0289 PF01810 LysE type translocator VpaChn25_A0290 PF03466 LysR substrate binding domain VpaChn25_A0290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0293 PF08359 YsiA-like protein, C-terminal region VpaChn25_A0293 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_A0295 PF00149 Calcineurin-like phosphoesterase VpaChn25_A0295 PF02872 5'-nucleotidase, C-terminal domain VpaChn25_A0296 PF03060 Nitronate monooxygenase VpaChn25_A0297 PF17678 Glycosyl hydrolase family 92 N-terminal domain VpaChn25_A0297 PF07971 Glycosyl hydrolase family 92 VpaChn25_A0298 PF17678 Glycosyl hydrolase family 92 N-terminal domain VpaChn25_A0298 PF07971 Glycosyl hydrolase family 92 VpaChn25_A0300 PF07971 Glycosyl hydrolase family 92 VpaChn25_A0300 PF17678 Glycosyl hydrolase family 92 N-terminal domain VpaChn25_A0301 PF17678 Glycosyl hydrolase family 92 N-terminal domain VpaChn25_A0301 PF07971 Glycosyl hydrolase family 92 VpaChn25_A0304 PF03466 LysR substrate binding domain VpaChn25_A0304 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0306 PF01641 SelR domain VpaChn25_A0306 PF01625 Peptide methionine sulfoxide reductase VpaChn25_A0307 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_A0308 PF00455 DeoR C terminal sensor domain VpaChn25_A0308 PF08220 DeoR-like helix-turn-helix domain VpaChn25_A0310 PF06628 Catalase-related immune-responsive VpaChn25_A0310 PF00199 Catalase VpaChn25_A0312 PF00857 Isochorismatase family VpaChn25_A0315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VpaChn25_A0315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VpaChn25_A0319 PF03466 LysR substrate binding domain VpaChn25_A0319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0320 PF00691 OmpA family VpaChn25_A0320 PF01389 OmpA-like transmembrane domain VpaChn25_A0322 PF06629 MltA-interacting protein MipA VpaChn25_A0323 PF04170 NlpE N-terminal domain VpaChn25_A0323 PF17185 NlpE C-terminal OB domain VpaChn25_A0324 PF02001 Protein of unknown function DUF134 VpaChn25_A0329 PF00009 Elongation factor Tu GTP binding domain VpaChn25_A0329 PF03144 Elongation factor Tu domain 2 VpaChn25_A0329 PF14492 Elongation Factor G, domain II VpaChn25_A0329 PF00679 Elongation factor G C-terminus VpaChn25_A0329 PF03764 Elongation factor G, domain IV VpaChn25_A0330 PF13378 Enolase C-terminal domain-like VpaChn25_A0330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VpaChn25_A0332 PF03466 LysR substrate binding domain VpaChn25_A0332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0334 PF00376 MerR family regulatory protein VpaChn25_A0334 PF09278 MerR, DNA binding VpaChn25_A0339 PF13091 PLD-like domain VpaChn25_A0340 PF13533 Biotin-lipoyl like VpaChn25_A0341 PF00873 AcrB/AcrD/AcrF family VpaChn25_A0346 PF08402 TOBE domain VpaChn25_A0346 PF00005 ABC transporter VpaChn25_A0351 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0351 PF07702 UTRA domain VpaChn25_A0352 PF02028 BCCT, betaine/carnitine/choline family transporter VpaChn25_A0353 PF00703 Glycosyl hydrolases family 2 VpaChn25_A0353 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VpaChn25_A0353 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VpaChn25_A0353 PF02837 Glycosyl hydrolases family 2, sugar binding domain VpaChn25_A0354 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A0356 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0356 PF07694 5TMR of 5TMR-LYT VpaChn25_A0359 PF00873 AcrB/AcrD/AcrF family VpaChn25_A0360 PF13533 Biotin-lipoyl like VpaChn25_A0361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0361 PF03466 LysR substrate binding domain VpaChn25_A0363 PF13416 Bacterial extracellular solute-binding protein VpaChn25_A0364 PF00579 tRNA synthetases class I (W and Y) VpaChn25_A0367 PF00391 PEP-utilising enzyme, mobile domain VpaChn25_A0367 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VpaChn25_A0367 PF02896 PEP-utilising enzyme, TIM barrel domain VpaChn25_A0368 PF03618 Kinase/pyrophosphorylase VpaChn25_A0369 PF17763 Glutaminase/Asparaginase C-terminal domain VpaChn25_A0369 PF00710 Asparaginase, N-terminal VpaChn25_A0371 PF03466 LysR substrate binding domain VpaChn25_A0371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0374 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VpaChn25_A0376 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VpaChn25_A0376 PF12833 Helix-turn-helix domain VpaChn25_A0379 PF00107 Zinc-binding dehydrogenase VpaChn25_A0379 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_A0380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_A0382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0382 PF03466 LysR substrate binding domain VpaChn25_A0383 PF03466 LysR substrate binding domain VpaChn25_A0383 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0385 PF00270 DEAD/DEAH box helicase VpaChn25_A0385 PF00271 Helicase conserved C-terminal domain VpaChn25_A0390 PF00155 Aminotransferase class I and II VpaChn25_A0391 PF12833 Helix-turn-helix domain VpaChn25_A0391 PF01497 Periplasmic binding protein VpaChn25_A0403 PF01872 RibD C-terminal domain VpaChn25_A0404 PF02909 Tetracyclin repressor-like, C-terminal domain VpaChn25_A0404 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_A0405 PF02798 Glutathione S-transferase, N-terminal domain VpaChn25_A0407 PF00768 D-alanyl-D-alanine carboxypeptidase VpaChn25_A0407 PF07943 Penicillin-binding protein 5, C-terminal domain VpaChn25_A0409 PF00462 Glutaredoxin VpaChn25_A0409 PF08534 Redoxin VpaChn25_A0410 PF00962 Adenosine/AMP deaminase VpaChn25_A0413 PF00313 'Cold-shock' DNA-binding domain VpaChn25_A0414 PF05726 Pirin C-terminal cupin domain VpaChn25_A0414 PF02678 Pirin VpaChn25_A0415 PF01734 Patatin-like phospholipase VpaChn25_A0417 PF01047 MarR family VpaChn25_A0421 PF07690 Major Facilitator Superfamily VpaChn25_A0423 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VpaChn25_A0424 PF08019 Phosphoethanolamine transferase EptA/EptB VpaChn25_A0424 PF00884 Sulfatase VpaChn25_A0425 PF01219 Prokaryotic diacylglycerol kinase VpaChn25_A0427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0427 PF00672 HAMP domain VpaChn25_A0427 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0428 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A0428 PF00072 Response regulator receiver domain VpaChn25_A0429 PF00106 short chain dehydrogenase VpaChn25_A0432 PF01323 DSBA-like thioredoxin domain VpaChn25_A0435 PF00255 Glutathione peroxidase VpaChn25_A0436 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VpaChn25_A0438 PF07690 Major Facilitator Superfamily VpaChn25_A0440 PF01966 HD domain VpaChn25_A0442 PF07969 Amidohydrolase family VpaChn25_A0443 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VpaChn25_A0445 PF01769 Divalent cation transporter VpaChn25_A0445 PF03448 MgtE intracellular N domain VpaChn25_A0445 PF00571 CBS domain VpaChn25_A0446 PF03109 ABC1 family VpaChn25_A0448 PF00155 Aminotransferase class I and II VpaChn25_A0448 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0449 PF13520 Amino acid permease VpaChn25_A0450 PF13404 AsnC-type helix-turn-helix domain VpaChn25_A0450 PF01037 Lrp/AsnC ligand binding domain VpaChn25_A0451 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0451 PF03466 LysR substrate binding domain VpaChn25_A0454 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VpaChn25_A0454 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VpaChn25_A0455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0455 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0455 PF00672 HAMP domain VpaChn25_A0455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VpaChn25_A0455 PF00072 Response regulator receiver domain VpaChn25_A0455 PF01627 Hpt domain VpaChn25_A0456 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VpaChn25_A0457 PF01554 MatE VpaChn25_A0458 PF04363 Protein of unknown function (DUF496) VpaChn25_A0461 PF04337 Protein of unknown function, DUF480 VpaChn25_A0462 PF01541 GIY-YIG catalytic domain VpaChn25_A0463 PF13407 Periplasmic binding protein domain VpaChn25_A0464 PF00072 Response regulator receiver domain VpaChn25_A0464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0464 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0464 PF09308 LuxQ, periplasmic VpaChn25_A0466 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_A0466 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_A0470 PF01037 Lrp/AsnC ligand binding domain VpaChn25_A0475 PF13721 SecD export protein N-terminal TM region VpaChn25_A0475 PF07549 SecD/SecF GG Motif VpaChn25_A0475 PF02355 Protein export membrane protein VpaChn25_A0476 PF02355 Protein export membrane protein VpaChn25_A0476 PF07549 SecD/SecF GG Motif VpaChn25_A0479 PF00106 short chain dehydrogenase VpaChn25_A0480 PF02803 Thiolase, C-terminal domain VpaChn25_A0480 PF00108 Thiolase, N-terminal domain VpaChn25_A0482 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VpaChn25_A0482 PF00561 alpha/beta hydrolase fold VpaChn25_A0484 PF03264 NapC/NirT cytochrome c family, N-terminal region VpaChn25_A0485 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VpaChn25_A0486 PF01568 Molydopterin dinucleotide binding domain VpaChn25_A0486 PF00384 Molybdopterin oxidoreductase VpaChn25_A0486 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_A0488 PF12838 4Fe-4S dicluster domain VpaChn25_A0488 PF13187 4Fe-4S dicluster domain VpaChn25_A0489 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VpaChn25_A0489 PF07730 Histidine kinase VpaChn25_A0489 PF00672 HAMP domain VpaChn25_A0489 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0490 PF00072 Response regulator receiver domain VpaChn25_A0490 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A0493 PF01546 Peptidase family M20/M25/M40 VpaChn25_A0493 PF07687 Peptidase dimerisation domain VpaChn25_A0494 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VpaChn25_A0495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_A0496 PF00873 AcrB/AcrD/AcrF family VpaChn25_A0497 PF17200 Single Cache domain 2 VpaChn25_A0497 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0497 PF00672 HAMP domain VpaChn25_A0498 PF00472 RF-1 domain VpaChn25_A0499 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A0500 PF01389 OmpA-like transmembrane domain VpaChn25_A0500 PF00691 OmpA family VpaChn25_A0501 PF00793 DAHP synthetase I family VpaChn25_A0502 PF07690 Major Facilitator Superfamily VpaChn25_A0503 PF08447 PAS fold VpaChn25_A0503 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0504 PF00456 Transketolase, thiamine diphosphate binding domain VpaChn25_A0504 PF02780 Transketolase, C-terminal domain VpaChn25_A0504 PF02779 Transketolase, pyrimidine binding domain VpaChn25_A0505 PF00923 Transaldolase/Fructose-6-phosphate aldolase VpaChn25_A0509 PF08329 Chitinase A, N-terminal domain VpaChn25_A0509 PF00704 Glycosyl hydrolases family 18 VpaChn25_A0510 PF00563 EAL domain VpaChn25_A0510 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A0510 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0511 PF00581 Rhodanese-like domain VpaChn25_A0515 PF00899 ThiF family VpaChn25_A0516 PF00994 Probable molybdopterin binding domain VpaChn25_A0516 PF03454 MoeA C-terminal region (domain IV) VpaChn25_A0516 PF03453 MoeA N-terminal region (domain I and II) VpaChn25_A0517 PF01227 GTP cyclohydrolase I VpaChn25_A0518 PF01566 Natural resistance-associated macrophage protein VpaChn25_A0520 PF00654 Voltage gated chloride channel VpaChn25_A0523 PF00248 Aldo/keto reductase family VpaChn25_A0524 PF00072 Response regulator receiver domain VpaChn25_A0526 PF03853 YjeF-related protein N-terminus VpaChn25_A0526 PF01256 Carbohydrate kinase VpaChn25_A0527 PF00478 IMP dehydrogenase / GMP reductase domain VpaChn25_A0528 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_A0528 PF00501 AMP-binding enzyme VpaChn25_A0529 PF01012 Electron transfer flavoprotein domain VpaChn25_A0529 PF00766 Electron transfer flavoprotein FAD-binding domain VpaChn25_A0530 PF01012 Electron transfer flavoprotein domain VpaChn25_A0533 PF12399 Branched-chain amino acid ATP-binding cassette transporter VpaChn25_A0533 PF00005 ABC transporter VpaChn25_A0538 PF00005 ABC transporter VpaChn25_A0539 PF14535 AMP-binding enzyme C-terminal domain VpaChn25_A0539 PF00501 AMP-binding enzyme VpaChn25_A0540 PF05724 Thiopurine S-methyltransferase (TPMT) VpaChn25_A0542 PF00034 Cytochrome c VpaChn25_A0544 PF02627 Carboxymuconolactone decarboxylase family VpaChn25_A0545 PF02567 Phenazine biosynthesis-like protein VpaChn25_A0546 PF02322 Cytochrome bd terminal oxidase subunit II VpaChn25_A0547 PF01654 Cytochrome bd terminal oxidase subunit I VpaChn25_A0548 PF00155 Aminotransferase class I and II VpaChn25_A0548 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A0549 PF12464 Maltose acetyltransferase VpaChn25_A0549 PF14602 Hexapeptide repeat of succinyl-transferase VpaChn25_A0550 PF12794 Mechanosensitive ion channel inner membrane domain 1 VpaChn25_A0550 PF00924 Mechanosensitive ion channel VpaChn25_A0550 PF12795 Mechanosensitive ion channel porin domain VpaChn25_A0553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0553 PF01627 Hpt domain VpaChn25_A0553 PF00072 Response regulator receiver domain VpaChn25_A0553 PF00672 HAMP domain VpaChn25_A0553 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VpaChn25_A0553 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0554 PF00682 HMGL-like VpaChn25_A0555 PF00364 Biotin-requiring enzyme VpaChn25_A0555 PF02785 Biotin carboxylase C-terminal domain VpaChn25_A0555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VpaChn25_A0555 PF00289 Biotin carboxylase, N-terminal domain VpaChn25_A0556 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_A0557 PF01039 Carboxyl transferase domain VpaChn25_A0558 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VpaChn25_A0558 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VpaChn25_A0558 PF02770 Acyl-CoA dehydrogenase, middle domain VpaChn25_A0559 PF09278 MerR, DNA binding VpaChn25_A0559 PF00376 MerR family regulatory protein VpaChn25_A0560 PF02803 Thiolase, C-terminal domain VpaChn25_A0560 PF00108 Thiolase, N-terminal domain VpaChn25_A0561 PF00171 Aldehyde dehydrogenase family VpaChn25_A0562 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VpaChn25_A0562 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VpaChn25_A0562 PF02770 Acyl-CoA dehydrogenase, middle domain VpaChn25_A0563 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_A0565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VpaChn25_A0565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VpaChn25_A0567 PF17151 Periplasmic sensor domain VpaChn25_A0567 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0568 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_A0568 PF13977 BetI-type transcriptional repressor, C-terminal VpaChn25_A0569 PF00171 Aldehyde dehydrogenase family VpaChn25_A0570 PF05199 GMC oxidoreductase VpaChn25_A0570 PF00732 GMC oxidoreductase VpaChn25_A0571 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VpaChn25_A0572 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0573 PF00005 ABC transporter VpaChn25_A0573 PF00571 CBS domain VpaChn25_A0574 PF00881 Nitroreductase family VpaChn25_A0576 PF16200 C-terminal region of band_7 VpaChn25_A0576 PF01145 SPFH domain / Band 7 family VpaChn25_A0578 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0578 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A0578 PF13188 PAS domain VpaChn25_A0578 PF00563 EAL domain VpaChn25_A0579 PF00034 Cytochrome c VpaChn25_A0579 PF03150 Di-haem cytochrome c peroxidase VpaChn25_A0580 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0580 PF00072 Response regulator receiver domain VpaChn25_A0580 PF09308 LuxQ, periplasmic VpaChn25_A0583 PF04116 Fatty acid hydroxylase superfamily VpaChn25_A0591 PF01048 Phosphorylase superfamily VpaChn25_A0592 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0592 PF00563 EAL domain VpaChn25_A0593 PF05025 RbsD / FucU transport protein family VpaChn25_A0594 PF00005 ABC transporter VpaChn25_A0595 PF02653 Branched-chain amino acid transport system / permease component VpaChn25_A0596 PF13407 Periplasmic binding protein domain VpaChn25_A0597 PF00294 pfkB family carbohydrate kinase VpaChn25_A0598 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_A0600 PF04973 Nicotinamide mononucleotide transporter VpaChn25_A0601 PF01048 Phosphorylase superfamily VpaChn25_A0604 PF01497 Periplasmic binding protein VpaChn25_A0605 PF01032 FecCD transport family VpaChn25_A0606 PF01032 FecCD transport family VpaChn25_A0607 PF00005 ABC transporter VpaChn25_A0608 PF13411 MerR HTH family regulatory protein VpaChn25_A0610 PF00593 TonB dependent receptor VpaChn25_A0610 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A0617 PF12805 FUSC-like inner membrane protein yccS VpaChn25_A0619 PF12462 DNA helicase IV / RNA helicase N terminal VpaChn25_A0619 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_A0619 PF13361 UvrD-like helicase C-terminal domain VpaChn25_A0620 PF02142 MGS-like domain VpaChn25_A0621 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VpaChn25_A0622 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0622 PF01627 Hpt domain VpaChn25_A0622 PF00672 HAMP domain VpaChn25_A0622 PF00072 Response regulator receiver domain VpaChn25_A0622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0625 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A0625 PF00072 Response regulator receiver domain VpaChn25_A0626 PF00884 Sulfatase VpaChn25_A0627 PF00884 Sulfatase VpaChn25_A0629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0629 PF03466 LysR substrate binding domain VpaChn25_A0630 PF00884 Sulfatase VpaChn25_A0631 PF13186 Iron-sulfur cluster-binding domain VpaChn25_A0631 PF04055 Radical SAM superfamily VpaChn25_A0632 PF07726 ATPase family associated with various cellular activities (AAA) VpaChn25_A0632 PF17863 AAA lid domain VpaChn25_A0635 PF00092 von Willebrand factor type A domain VpaChn25_A0638 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VpaChn25_A0639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0639 PF03466 LysR substrate binding domain VpaChn25_A0640 PF00781 Diacylglycerol kinase catalytic domain VpaChn25_A0641 PF04076 Bacterial OB fold (BOF) protein VpaChn25_A0644 PF04055 Radical SAM superfamily VpaChn25_A0644 PF13186 Iron-sulfur cluster-binding domain VpaChn25_A0646 PF08774 VRR-NUC domain VpaChn25_A0646 PF18081 Fanconi anemia-associated nuclease SAP domain VpaChn25_A0649 PF01435 Peptidase family M48 VpaChn25_A0650 PF04011 LemA family VpaChn25_A0651 PF03606 C4-dicarboxylate anaerobic carrier VpaChn25_A0653 PF00583 Acetyltransferase (GNAT) family VpaChn25_A0653 PF00814 Glycoprotease family VpaChn25_A0655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0655 PF00072 Response regulator receiver domain VpaChn25_A0656 PF00155 Aminotransferase class I and II VpaChn25_A0657 PF01926 50S ribosome-binding GTPase VpaChn25_A0659 PF08453 Peptidase family M9 N-terminal VpaChn25_A0659 PF01752 Collagenase VpaChn25_A0659 PF04151 Bacterial pre-peptidase C-terminal domain VpaChn25_A0661 PF12833 Helix-turn-helix domain VpaChn25_A0662 PF03466 LysR substrate binding domain VpaChn25_A0662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0666 PF13629 Pilus formation protein N terminal region VpaChn25_A0666 PF04972 BON domain VpaChn25_A0666 PF00263 Bacterial type II and III secretion system protein VpaChn25_A0669 PF00437 Type II/IV secretion system protein VpaChn25_A0676 PF00691 OmpA family VpaChn25_A0676 PF05736 OprF membrane domain VpaChn25_A0678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0678 PF03466 LysR substrate binding domain VpaChn25_A0679 PF03466 LysR substrate binding domain VpaChn25_A0679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0681 PF09456 RcsC Alpha-Beta-Loop (ABL) VpaChn25_A0681 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0681 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0681 PF00072 Response regulator receiver domain VpaChn25_A0682 PF13188 PAS domain VpaChn25_A0682 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A0682 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0682 PF00563 EAL domain VpaChn25_A0683 PF00072 Response regulator receiver domain VpaChn25_A0683 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A0684 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0686 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A0686 PF00072 Response regulator receiver domain VpaChn25_A0690 PF01584 CheW-like domain VpaChn25_A0690 PF00072 Response regulator receiver domain VpaChn25_A0693 PF00892 EamA-like transporter family VpaChn25_A0695 PF01569 PAP2 superfamily VpaChn25_A0697 PF03413 Peptidase propeptide and YPEB domain VpaChn25_A0697 PF04151 Bacterial pre-peptidase C-terminal domain VpaChn25_A0697 PF01447 Thermolysin metallopeptidase, catalytic domain VpaChn25_A0697 PF02868 Thermolysin metallopeptidase, alpha-helical domain VpaChn25_A0697 PF07504 Fungalysin/Thermolysin Propeptide Motif VpaChn25_A0698 PF00893 Small Multidrug Resistance protein VpaChn25_A0699 PF00892 EamA-like transporter family VpaChn25_A0703 PF00171 Aldehyde dehydrogenase family VpaChn25_A0704 PF00939 Sodium:sulfate symporter transmembrane region VpaChn25_A0705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0705 PF17203 Single cache domain 3 VpaChn25_A0705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VpaChn25_A0705 PF00989 PAS fold VpaChn25_A0706 PF12431 Transcriptional regulator VpaChn25_A0706 PF00072 Response regulator receiver domain VpaChn25_A0708 PF01645 Conserved region in glutamate synthase VpaChn25_A0708 PF13187 4Fe-4S dicluster domain VpaChn25_A0711 PF00141 Peroxidase VpaChn25_A0714 PF01757 Acyltransferase family VpaChn25_A0716 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_A0717 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_A0721 PF03448 MgtE intracellular N domain VpaChn25_A0721 PF01769 Divalent cation transporter VpaChn25_A0721 PF00571 CBS domain VpaChn25_A0728 PF01327 Polypeptide deformylase VpaChn25_A0729 PF00376 MerR family regulatory protein VpaChn25_A0729 PF09278 MerR, DNA binding VpaChn25_A0732 PF02253 Phospholipase A1 VpaChn25_A0736 PF00664 ABC transporter transmembrane region VpaChn25_A0736 PF00005 ABC transporter VpaChn25_A0738 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VpaChn25_A0738 PF02811 PHP domain VpaChn25_A0738 PF00929 Exonuclease VpaChn25_A0738 PF11490 DNA polymerase III polC-type N-terminus II VpaChn25_A0738 PF14579 Helix-hairpin-helix motif VpaChn25_A0738 PF07733 Bacterial DNA polymerase III alpha NTPase domain VpaChn25_A0739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0739 PF03466 LysR substrate binding domain VpaChn25_A0740 PF01039 Carboxyl transferase domain VpaChn25_A0740 PF17848 Acetyl-coA carboxylase zinc finger domain VpaChn25_A0747 PF02311 AraC-like ligand binding domain VpaChn25_A0747 PF12833 Helix-turn-helix domain VpaChn25_A0748 PF00293 NUDIX domain VpaChn25_A0749 PF02347 Glycine cleavage system P-protein VpaChn25_A0750 PF01597 Glycine cleavage H-protein VpaChn25_A0751 PF00464 Serine hydroxymethyltransferase VpaChn25_A0753 PF08669 Glycine cleavage T-protein C-terminal barrel domain VpaChn25_A0753 PF01571 Aminomethyltransferase folate-binding domain VpaChn25_A0757 PF00873 AcrB/AcrD/AcrF family VpaChn25_A0759 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VpaChn25_A0759 PF02378 Phosphotransferase system, EIIC VpaChn25_A0760 PF00294 pfkB family carbohydrate kinase VpaChn25_A0761 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_A0761 PF00381 PTS HPr component phosphorylation site VpaChn25_A0762 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VpaChn25_A0762 PF00356 Bacterial regulatory proteins, lacI family VpaChn25_A0766 PF00563 EAL domain VpaChn25_A0766 PF01590 GAF domain VpaChn25_A0766 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0766 PF00989 PAS fold VpaChn25_A0767 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0768 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_A0769 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0770 PF00005 ABC transporter VpaChn25_A0771 PF02887 Pyruvate kinase, alpha/beta domain VpaChn25_A0771 PF00224 Pyruvate kinase, barrel domain VpaChn25_A0772 PF07690 Major Facilitator Superfamily VpaChn25_A0774 PF00672 HAMP domain VpaChn25_A0774 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0774 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A0775 PF02954 Bacterial regulatory protein, Fis family VpaChn25_A0775 PF00072 Response regulator receiver domain VpaChn25_A0775 PF14532 Sigma-54 interaction domain VpaChn25_A0777 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_A0778 PF12833 Helix-turn-helix domain VpaChn25_A0778 PF06719 AraC-type transcriptional regulator N-terminus VpaChn25_A0779 PF06483 Chitinase C VpaChn25_A0779 PF00704 Glycosyl hydrolases family 18 VpaChn25_A0780 PF00483 Nucleotidyl transferase VpaChn25_A0781 PF01268 Formate--tetrahydrofolate ligase VpaChn25_A0782 PF00294 pfkB family carbohydrate kinase VpaChn25_A0785 PF11849 Domain of unknown function (DUF3369) VpaChn25_A0786 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A0788 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0790 PF04336 Acyl carrier protein phosphodiesterase VpaChn25_A0791 PF00270 DEAD/DEAH box helicase VpaChn25_A0791 PF00271 Helicase conserved C-terminal domain VpaChn25_A0792 PF00563 EAL domain VpaChn25_A0792 PF12792 CSS motif domain associated with EAL VpaChn25_A0795 PF01292 Prokaryotic cytochrome b561 VpaChn25_A0796 PF04264 YceI-like domain VpaChn25_A0797 PF01226 Formate/nitrite transporter VpaChn25_A0798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0798 PF03466 LysR substrate binding domain VpaChn25_A0799 PF06496 Protein of unknown function (DUF1097) VpaChn25_A0800 PF11398 Protein of unknown function (DUF2813) VpaChn25_A0801 PF02872 5'-nucleotidase, C-terminal domain VpaChn25_A0801 PF00149 Calcineurin-like phosphoesterase VpaChn25_A0802 PF03741 Integral membrane protein TerC family VpaChn25_A0805 PF12262 Bacterial virulence factor lipase N-terminal VpaChn25_A0806 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VpaChn25_A0809 PF03061 Thioesterase superfamily VpaChn25_A0811 PF12793 Sugar transport-related sRNA regulator N-term VpaChn25_A0811 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_A0816 PF00226 DnaJ domain VpaChn25_A0816 PF01556 DnaJ C terminal domain VpaChn25_A0816 PF00684 DnaJ central domain VpaChn25_A0818 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A0818 PF13188 PAS domain VpaChn25_A0818 PF00563 EAL domain VpaChn25_A0818 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0819 PF12241 Trans-2-enoyl-CoA reductase catalytic region VpaChn25_A0819 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VpaChn25_A0819 PF07055 Enoyl reductase FAD binding domain VpaChn25_A0820 PF13472 GDSL-like Lipase/Acylhydrolase family VpaChn25_A0821 PF00005 ABC transporter VpaChn25_A0824 PF02626 Carboxyltransferase domain, subdomain A and B VpaChn25_A0825 PF02682 Carboxyltransferase domain, subdomain C and D VpaChn25_A0826 PF03746 LamB/YcsF family VpaChn25_A0827 PF13426 PAS domain VpaChn25_A0827 PF08447 PAS fold VpaChn25_A0827 PF05231 MASE1 VpaChn25_A0827 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0827 PF00563 EAL domain VpaChn25_A0827 PF08448 PAS fold VpaChn25_A0828 PF16363 GDP-mannose 4,6 dehydratase VpaChn25_A0830 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A0830 PF00593 TonB dependent receptor VpaChn25_A0831 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0831 PF03466 LysR substrate binding domain VpaChn25_A0832 PF00583 Acetyltransferase (GNAT) family VpaChn25_A0832 PF13607 Succinyl-CoA ligase like flavodoxin domain VpaChn25_A0832 PF13380 CoA binding domain VpaChn25_A0834 PF07478 D-ala D-ala ligase C-terminus VpaChn25_A0834 PF01820 D-ala D-ala ligase N-terminus VpaChn25_A0836 PF01253 Translation initiation factor SUI1 VpaChn25_A0838 PF13538 UvrD-like helicase C-terminal domain VpaChn25_A0838 PF14490 Helix-hairpin-helix containing domain VpaChn25_A0838 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain VpaChn25_A0853 PF03466 LysR substrate binding domain VpaChn25_A0853 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0855 PF00582 Universal stress protein family VpaChn25_A0856 PF03701 Uncharacterised protein family (UPF0181) VpaChn25_A0859 PF00072 Response regulator receiver domain VpaChn25_A0859 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A0861 PF02233 NAD(P) transhydrogenase beta subunit VpaChn25_A0862 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VpaChn25_A0862 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VpaChn25_A0862 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VpaChn25_A0865 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0865 PF00072 Response regulator receiver domain VpaChn25_A0867 PF00360 Phytochrome region VpaChn25_A0867 PF01590 GAF domain VpaChn25_A0867 PF00563 EAL domain VpaChn25_A0867 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0869 PF00005 ABC transporter VpaChn25_A0869 PF03459 TOBE domain VpaChn25_A0870 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0872 PF07685 CobB/CobQ-like glutamine amidotransferase domain VpaChn25_A0873 PF04076 Bacterial OB fold (BOF) protein VpaChn25_A0876 PF08443 RimK-like ATP-grasp domain VpaChn25_A0876 PF18030 RimK PreATP-grasp domain VpaChn25_A0877 PF00155 Aminotransferase class I and II VpaChn25_A0878 PF12833 Helix-turn-helix domain VpaChn25_A0879 PF01554 MatE VpaChn25_A0881 PF03477 ATP cone domain VpaChn25_A0881 PF13597 Anaerobic ribonucleoside-triphosphate reductase VpaChn25_A0884 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_A0885 PF00873 AcrB/AcrD/AcrF family VpaChn25_A0887 PF04143 Sulphur transport VpaChn25_A0890 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_A0890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VpaChn25_A0891 PF00384 Molybdopterin oxidoreductase VpaChn25_A0892 PF03466 LysR substrate binding domain VpaChn25_A0892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0893 PF02634 FdhD/NarQ family VpaChn25_A0894 PF07690 Major Facilitator Superfamily VpaChn25_A0895 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A0895 PF00072 Response regulator receiver domain VpaChn25_A0896 PF05231 MASE1 VpaChn25_A0896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A0896 PF07730 Histidine kinase VpaChn25_A0897 PF07690 Major Facilitator Superfamily VpaChn25_A0898 PF01238 Phosphomannose isomerase type I VpaChn25_A0902 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VpaChn25_A0902 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VpaChn25_A0903 PF00085 Thioredoxin VpaChn25_A0904 PF07690 Major Facilitator Superfamily VpaChn25_A0906 PF01554 MatE VpaChn25_A0909 PF00593 TonB dependent receptor VpaChn25_A0909 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A0911 PF03605 Anaerobic c4-dicarboxylate membrane transporter VpaChn25_A0914 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VpaChn25_A0914 PF14824 Sirohaem biosynthesis protein central VpaChn25_A0914 PF10414 Sirohaem synthase dimerisation region VpaChn25_A0915 PF01226 Formate/nitrite transporter VpaChn25_A0916 PF13806 Rieske-like [2Fe-2S] domain VpaChn25_A0917 PF04324 BFD-like [2Fe-2S] binding domain VpaChn25_A0917 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_A0917 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VpaChn25_A0917 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VpaChn25_A0917 PF18267 Rubredoxin NAD+ reductase C-terminal domain VpaChn25_A0918 PF01272 Transcription elongation factor, GreA/GreB, C-term VpaChn25_A0918 PF14760 Rnk N-terminus VpaChn25_A0924 PF06965 Na+/H+ antiporter 1 VpaChn25_A0924 PF13462 Thioredoxin VpaChn25_A0928 PF00128 Alpha amylase, catalytic domain VpaChn25_A0928 PF09154 Domain of unknown function (DUF1939) VpaChn25_A0929 PF00672 HAMP domain VpaChn25_A0929 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A0930 PF00842 Alanine racemase, C-terminal domain VpaChn25_A0930 PF01168 Alanine racemase, N-terminal domain VpaChn25_A0934 PF09330 D-lactate dehydrogenase, membrane binding VpaChn25_A0934 PF01565 FAD binding domain VpaChn25_A0935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A0935 PF03466 LysR substrate binding domain VpaChn25_A0936 PF05762 VWA domain containing CoxE-like protein VpaChn25_A0937 PF07728 AAA domain (dynein-related subfamily) VpaChn25_A0937 PF17868 AAA lid domain VpaChn25_A0937 PF12592 Protein of unknown function (DUF3763) VpaChn25_A0939 PF01212 Beta-eliminating lyase VpaChn25_A0940 PF00034 Cytochrome c VpaChn25_A0941 PF03606 C4-dicarboxylate anaerobic carrier VpaChn25_A0943 PF07690 Major Facilitator Superfamily VpaChn25_A0945 PF08212 Lipocalin-like domain VpaChn25_A0949 PF13476 AAA domain VpaChn25_A0950 PF12320 Type 5 capsule protein repressor C-terminal domain VpaChn25_A0950 PF00149 Calcineurin-like phosphoesterase VpaChn25_A0952 PF16671 Actin cross-linking domain VpaChn25_A0952 PF04717 Type VI secretion system, phage-baseplate injector VpaChn25_A0954 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_A0954 PF10431 C-terminal, D2-small domain, of ClpB protein VpaChn25_A0954 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_A0954 PF17871 AAA lid domain VpaChn25_A0955 PF00004 ATPase family associated with various cellular activities (AAA) VpaChn25_A0955 PF10431 C-terminal, D2-small domain, of ClpB protein VpaChn25_A0955 PF07724 AAA domain (Cdc48 subfamily) VpaChn25_A0955 PF17871 AAA lid domain VpaChn25_A0967 PF00691 OmpA family VpaChn25_A0967 PF13677 Membrane MotB of proton-channel complex MotA/MotB VpaChn25_A0971 PF00069 Protein kinase domain VpaChn25_A0971 PF03793 PASTA domain VpaChn25_A0975 PF00072 Response regulator receiver domain VpaChn25_A0975 PF00211 Adenylate and Guanylate cyclase catalytic domain VpaChn25_A0978 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_A0978 PF08361 MAATS-type transcriptional repressor, C-terminal region VpaChn25_A0981 PF13806 Rieske-like [2Fe-2S] domain VpaChn25_A0981 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_A0981 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VpaChn25_A0981 PF18267 Rubredoxin NAD+ reductase C-terminal domain VpaChn25_A0981 PF04324 BFD-like [2Fe-2S] binding domain VpaChn25_A0981 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VpaChn25_A0982 PF00005 ABC transporter VpaChn25_A0983 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A0985 PF08376 Nitrate and nitrite sensing VpaChn25_A0985 PF03861 ANTAR domain VpaChn25_A0986 PF01738 Dienelactone hydrolase family VpaChn25_A0987 PF00591 Glycosyl transferase family, a/b domain VpaChn25_A0987 PF02885 Glycosyl transferase family, helical bundle domain VpaChn25_A0988 PF10414 Sirohaem synthase dimerisation region VpaChn25_A0988 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VpaChn25_A0988 PF14824 Sirohaem biosynthesis protein central VpaChn25_A0989 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_A0989 PF01568 Molydopterin dinucleotide binding domain VpaChn25_A0989 PF00384 Molybdopterin oxidoreductase VpaChn25_A0992 PF03222 Tryptophan/tyrosine permease family VpaChn25_A0993 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A0993 PF00072 Response regulator receiver domain VpaChn25_A0995 PF00082 Subtilase family VpaChn25_A0995 PF01483 Proprotein convertase P-domain VpaChn25_A0997 PF00245 Alkaline phosphatase VpaChn25_A1000 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A1000 PF00072 Response regulator receiver domain VpaChn25_A1005 PF04314 Copper chaperone PCu(A)C VpaChn25_A1006 PF00012 Hsp70 protein VpaChn25_A1009 PF00676 Dehydrogenase E1 component VpaChn25_A1010 PF02779 Transketolase, pyrimidine binding domain VpaChn25_A1010 PF02780 Transketolase, C-terminal domain VpaChn25_A1011 PF00364 Biotin-requiring enzyme VpaChn25_A1011 PF02817 e3 binding domain VpaChn25_A1011 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VpaChn25_A1013 PF00043 Glutathione S-transferase, C-terminal domain VpaChn25_A1013 PF02798 Glutathione S-transferase, N-terminal domain VpaChn25_A1014 PF03466 LysR substrate binding domain VpaChn25_A1014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1016 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1017 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1018 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_A1019 PF00005 ABC transporter VpaChn25_A1021 PF08031 Berberine and berberine like VpaChn25_A1021 PF01565 FAD binding domain VpaChn25_A1022 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_A1023 PF01040 UbiA prenyltransferase family VpaChn25_A1025 PF00510 Cytochrome c oxidase subunit III VpaChn25_A1026 PF00115 Cytochrome C and Quinol oxidase polypeptide I VpaChn25_A1027 PF06481 COX Aromatic Rich Motif VpaChn25_A1027 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VpaChn25_A1029 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VpaChn25_A1029 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VpaChn25_A1030 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_A1031 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_A1033 PF00171 Aldehyde dehydrogenase family VpaChn25_A1034 PF00108 Thiolase, N-terminal domain VpaChn25_A1034 PF02803 Thiolase, C-terminal domain VpaChn25_A1035 PF00376 MerR family regulatory protein VpaChn25_A1035 PF09278 MerR, DNA binding VpaChn25_A1036 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VpaChn25_A1036 PF02770 Acyl-CoA dehydrogenase, middle domain VpaChn25_A1036 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VpaChn25_A1037 PF01039 Carboxyl transferase domain VpaChn25_A1038 PF00378 Enoyl-CoA hydratase/isomerase VpaChn25_A1039 PF00682 HMGL-like VpaChn25_A1040 PF10063 Uncharacterized integral membrane protein (DUF2301) VpaChn25_A1042 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1042 PF08447 PAS fold VpaChn25_A1042 PF13426 PAS domain VpaChn25_A1044 PF01965 DJ-1/PfpI family VpaChn25_A1049 PF01638 HxlR-like helix-turn-helix VpaChn25_A1051 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_A1052 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VpaChn25_A1056 PF03466 LysR substrate binding domain VpaChn25_A1056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1057 PF07690 Major Facilitator Superfamily VpaChn25_A1058 PF00106 short chain dehydrogenase VpaChn25_A1060 PF13657 HipA N-terminal domain VpaChn25_A1060 PF07804 HipA-like C-terminal domain VpaChn25_A1061 PF02463 RecF/RecN/SMC N terminal domain VpaChn25_A1069 PF00288 GHMP kinases N terminal domain VpaChn25_A1069 PF08544 GHMP kinases C terminal VpaChn25_A1069 PF10509 Galactokinase galactose-binding signature VpaChn25_A1070 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VpaChn25_A1070 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VpaChn25_A1071 PF16363 GDP-mannose 4,6 dehydratase VpaChn25_A1072 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1072 PF00672 HAMP domain VpaChn25_A1072 PF17200 Single Cache domain 2 VpaChn25_A1073 PF02264 LamB porin VpaChn25_A1074 PF08532 Beta-galactosidase trimerisation domain VpaChn25_A1074 PF08533 Beta-galactosidase C-terminal domain VpaChn25_A1074 PF02449 Beta-galactosidase VpaChn25_A1075 PF07745 Glycosyl hydrolase family 53 VpaChn25_A1076 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1077 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1078 PF13416 Bacterial extracellular solute-binding protein VpaChn25_A1079 PF17912 MalK OB fold domain VpaChn25_A1079 PF00005 ABC transporter VpaChn25_A1081 PF07745 Glycosyl hydrolase family 53 VpaChn25_A1091 PF00871 Acetokinase family VpaChn25_A1093 PF13426 PAS domain VpaChn25_A1093 PF00563 EAL domain VpaChn25_A1093 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1094 PF00271 Helicase conserved C-terminal domain VpaChn25_A1094 PF00270 DEAD/DEAH box helicase VpaChn25_A1094 PF03880 DbpA RNA binding domain VpaChn25_A1095 PF00773 RNB domain VpaChn25_A1095 PF00575 S1 RNA binding domain VpaChn25_A1095 PF08206 Ribonuclease B OB domain VpaChn25_A1096 PF12833 Helix-turn-helix domain VpaChn25_A1099 PF12849 PBP superfamily domain VpaChn25_A1101 PF03466 LysR substrate binding domain VpaChn25_A1101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1102 PF13186 Iron-sulfur cluster-binding domain VpaChn25_A1102 PF04055 Radical SAM superfamily VpaChn25_A1103 PF00884 Sulfatase VpaChn25_A1104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1104 PF03466 LysR substrate binding domain VpaChn25_A1106 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1106 PF00672 HAMP domain VpaChn25_A1107 PF00005 ABC transporter VpaChn25_A1108 PF12792 CSS motif domain associated with EAL VpaChn25_A1108 PF00563 EAL domain VpaChn25_A1112 PF00271 Helicase conserved C-terminal domain VpaChn25_A1112 PF00270 DEAD/DEAH box helicase VpaChn25_A1113 PF07683 Cobalamin synthesis protein cobW C-terminal domain VpaChn25_A1113 PF02492 CobW/HypB/UreG, nucleotide-binding domain VpaChn25_A1115 PF01470 Pyroglutamyl peptidase VpaChn25_A1117 PF00291 Pyridoxal-phosphate dependent enzyme VpaChn25_A1118 PF09905 DNA-binding protein VF530 VpaChn25_A1119 PF00271 Helicase conserved C-terminal domain VpaChn25_A1119 PF00270 DEAD/DEAH box helicase VpaChn25_A1120 PF12843 Putative quorum-sensing-regulated virulence factor VpaChn25_A1124 PF01329 Pterin 4 alpha carbinolamine dehydratase VpaChn25_A1125 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VpaChn25_A1126 PF13193 AMP-binding enzyme C-terminal domain VpaChn25_A1126 PF00501 AMP-binding enzyme VpaChn25_A1128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1128 PF03466 LysR substrate binding domain VpaChn25_A1133 PF00892 EamA-like transporter family VpaChn25_A1136 PF00465 Iron-containing alcohol dehydrogenase VpaChn25_A1137 PF07995 Glucose / Sorbosone dehydrogenase VpaChn25_A1139 PF00210 Ferritin-like domain VpaChn25_A1140 PF17200 Single Cache domain 2 VpaChn25_A1140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1140 PF00672 HAMP domain VpaChn25_A1142 PF00005 ABC transporter VpaChn25_A1142 PF12704 MacB-like periplasmic core domain VpaChn25_A1142 PF02687 FtsX-like permease family VpaChn25_A1143 PF00005 ABC transporter VpaChn25_A1143 PF02687 FtsX-like permease family VpaChn25_A1143 PF12704 MacB-like periplasmic core domain VpaChn25_A1146 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1147 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1147 PF13426 PAS domain VpaChn25_A1147 PF08447 PAS fold VpaChn25_A1148 PF03889 Alternative ribosome-rescue factor A VpaChn25_A1149 PF00313 'Cold-shock' DNA-binding domain VpaChn25_A1155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VpaChn25_A1155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VpaChn25_A1156 PF01040 UbiA prenyltransferase family VpaChn25_A1157 PF02628 Cytochrome oxidase assembly protein VpaChn25_A1161 PF00510 Cytochrome c oxidase subunit III VpaChn25_A1162 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VpaChn25_A1163 PF00115 Cytochrome C and Quinol oxidase polypeptide I VpaChn25_A1164 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VpaChn25_A1164 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VpaChn25_A1165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VpaChn25_A1165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VpaChn25_A1165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VpaChn25_A1165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VpaChn25_A1167 PF01810 LysE type translocator VpaChn25_A1168 PF12833 Helix-turn-helix domain VpaChn25_A1171 PF01557 Fumarylacetoacetate (FAA) hydrolase family VpaChn25_A1173 PF00267 Gram-negative porin VpaChn25_A1174 PF00892 EamA-like transporter family VpaChn25_A1175 PF00462 Glutaredoxin VpaChn25_A1178 PF07690 Major Facilitator Superfamily VpaChn25_A1179 PF03466 LysR substrate binding domain VpaChn25_A1179 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1180 PF00563 EAL domain VpaChn25_A1180 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1180 PF08448 PAS fold VpaChn25_A1180 PF08447 PAS fold VpaChn25_A1181 PF01551 Peptidase family M23 VpaChn25_A1181 PF01476 LysM domain VpaChn25_A1181 PF08525 Opacity-associated protein A N-terminal motif VpaChn25_A1186 PF02743 Cache domain VpaChn25_A1186 PF00672 HAMP domain VpaChn25_A1186 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1188 PF03222 Tryptophan/tyrosine permease family VpaChn25_A1195 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_A1195 PF00107 Zinc-binding dehydrogenase VpaChn25_A1196 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VpaChn25_A1196 PF02378 Phosphotransferase system, EIIC VpaChn25_A1197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_A1200 PF01758 Sodium Bile acid symporter family VpaChn25_A1202 PF01161 Phosphatidylethanolamine-binding protein VpaChn25_A1203 PF02567 Phenazine biosynthesis-like protein VpaChn25_A1204 PF10282 Lactonase, 7-bladed beta-propeller VpaChn25_A1205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1205 PF00672 HAMP domain VpaChn25_A1208 PF00005 ABC transporter VpaChn25_A1212 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VpaChn25_A1212 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VpaChn25_A1212 PF01568 Molydopterin dinucleotide binding domain VpaChn25_A1212 PF00384 Molybdopterin oxidoreductase VpaChn25_A1212 PF12838 4Fe-4S dicluster domain VpaChn25_A1216 PF00873 AcrB/AcrD/AcrF family VpaChn25_A1217 PF00873 AcrB/AcrD/AcrF family VpaChn25_A1222 PF13185 GAF domain VpaChn25_A1222 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1224 PF13302 Acetyltransferase (GNAT) domain VpaChn25_A1226 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VpaChn25_A1227 PF00873 AcrB/AcrD/AcrF family VpaChn25_A1228 PF13533 Biotin-lipoyl like VpaChn25_A1230 PF00326 Prolyl oligopeptidase family VpaChn25_A1230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VpaChn25_A1231 PF16326 ABC transporter C-terminal domain VpaChn25_A1231 PF12848 ABC transporter VpaChn25_A1231 PF00005 ABC transporter VpaChn25_A1232 PF00582 Universal stress protein family VpaChn25_A1233 PF02525 Flavodoxin-like fold VpaChn25_A1234 PF02254 TrkA-N domain VpaChn25_A1234 PF00999 Sodium/hydrogen exchanger family VpaChn25_A1237 PF00128 Alpha amylase, catalytic domain VpaChn25_A1239 PF08453 Peptidase family M9 N-terminal VpaChn25_A1239 PF04151 Bacterial pre-peptidase C-terminal domain VpaChn25_A1239 PF01752 Collagenase VpaChn25_A1243 PF03466 LysR substrate binding domain VpaChn25_A1243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1244 PF00210 Ferritin-like domain VpaChn25_A1245 PF00141 Peroxidase VpaChn25_A1250 PF00082 Subtilase family VpaChn25_A1253 PF07690 Major Facilitator Superfamily VpaChn25_A1254 PF03466 LysR substrate binding domain VpaChn25_A1254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1257 PF01584 CheW-like domain VpaChn25_A1257 PF00072 Response regulator receiver domain VpaChn25_A1260 PF01243 Pyridoxamine 5'-phosphate oxidase VpaChn25_A1261 PF06228 Haem utilisation ChuX/HutX VpaChn25_A1262 PF04055 Radical SAM superfamily VpaChn25_A1263 PF03544 Gram-negative bacterial TonB protein C-terminal VpaChn25_A1264 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_A1265 PF02472 Biopolymer transport protein ExbD/TolR VpaChn25_A1267 PF01032 FecCD transport family VpaChn25_A1268 PF00005 ABC transporter VpaChn25_A1276 PF01467 Cytidylyltransferase-like VpaChn25_A1277 PF02540 NAD synthase VpaChn25_A1278 PF03473 MOSC domain VpaChn25_A1278 PF03473 MOSC domain VpaChn25_A1278 PF03476 MOSC N-terminal beta barrel domain VpaChn25_A1278 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_A1278 PF00111 2Fe-2S iron-sulfur cluster binding domain VpaChn25_A1278 PF03476 MOSC N-terminal beta barrel domain VpaChn25_A1279 PF01679 Proteolipid membrane potential modulator VpaChn25_A1280 PF01979 Amidohydrolase family VpaChn25_A1281 PF05661 Protein of unknown function (DUF808) VpaChn25_A1287 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1288 PF14785 Maltose transport system permease protein MalF P2 domain VpaChn25_A1288 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1289 PF01547 Bacterial extracellular solute-binding protein VpaChn25_A1290 PF00005 ABC transporter VpaChn25_A1290 PF08402 TOBE domain VpaChn25_A1291 PF02397 Bacterial sugar transferase VpaChn25_A1294 PF02706 Chain length determinant protein VpaChn25_A1294 PF13807 G-rich domain on putative tyrosine kinase VpaChn25_A1294 PF13614 AAA domain VpaChn25_A1296 PF13439 Glycosyltransferase Family 4 VpaChn25_A1296 PF00534 Glycosyl transferases group 1 VpaChn25_A1303 PF00440 Bacterial regulatory proteins, tetR family VpaChn25_A1303 PF16925 Tetracyclin repressor-like, C-terminal domain VpaChn25_A1304 PF00107 Zinc-binding dehydrogenase VpaChn25_A1304 PF16884 N-terminal domain of oxidoreductase VpaChn25_A1305 PF13417 Glutathione S-transferase, N-terminal domain VpaChn25_A1306 PF00199 Catalase VpaChn25_A1306 PF06628 Catalase-related immune-responsive VpaChn25_A1307 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VpaChn25_A1307 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VpaChn25_A1309 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VpaChn25_A1311 PF12833 Helix-turn-helix domain VpaChn25_A1312 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VpaChn25_A1312 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VpaChn25_A1313 PF01238 Phosphomannose isomerase type I VpaChn25_A1315 PF13419 Haloacid dehalogenase-like hydrolase VpaChn25_A1316 PF00127 Copper binding proteins, plastocyanin/azurin family VpaChn25_A1317 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A1317 PF00563 EAL domain VpaChn25_A1317 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1319 PF02386 Cation transport protein VpaChn25_A1320 PF02080 TrkA-C domain VpaChn25_A1320 PF02254 TrkA-N domain VpaChn25_A1321 PF00072 Response regulator receiver domain VpaChn25_A1321 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A1322 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A1322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A1322 PF16736 Single Cache-like VpaChn25_A1322 PF00989 PAS fold VpaChn25_A1323 PF00005 ABC transporter VpaChn25_A1323 PF00664 ABC transporter transmembrane region VpaChn25_A1324 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A1324 PF00593 TonB dependent receptor VpaChn25_A1325 PF00005 ABC transporter VpaChn25_A1326 PF01497 Periplasmic binding protein VpaChn25_A1327 PF01032 FecCD transport family VpaChn25_A1329 PF01389 OmpA-like transmembrane domain VpaChn25_A1329 PF00691 OmpA family VpaChn25_A1332 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_A1333 PF00005 ABC transporter VpaChn25_A1333 PF00664 ABC transporter transmembrane region VpaChn25_A1335 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A1336 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A1338 PF02743 Cache domain VpaChn25_A1338 PF00672 HAMP domain VpaChn25_A1338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1340 PF17863 AAA lid domain VpaChn25_A1340 PF07726 ATPase family associated with various cellular activities (AAA) VpaChn25_A1341 PF01882 Protein of unknown function DUF58 VpaChn25_A1343 PF13519 von Willebrand factor type A domain VpaChn25_A1344 PF07584 Aerotolerance regulator N-terminal VpaChn25_A1344 PF13519 von Willebrand factor type A domain VpaChn25_A1347 PF00005 ABC transporter VpaChn25_A1348 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1349 PF00528 Binding-protein-dependent transport system inner membrane component VpaChn25_A1350 PF12849 PBP superfamily domain VpaChn25_A1351 PF00672 HAMP domain VpaChn25_A1351 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1355 PF00593 TonB dependent receptor VpaChn25_A1355 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A1356 PF00326 Prolyl oligopeptidase family VpaChn25_A1356 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VpaChn25_A1357 PF00270 DEAD/DEAH box helicase VpaChn25_A1357 PF00271 Helicase conserved C-terminal domain VpaChn25_A1359 PF17969 L,D-transpeptidase C-terminal domain VpaChn25_A1359 PF01476 LysM domain VpaChn25_A1359 PF03734 L,D-transpeptidase catalytic domain VpaChn25_A1360 PF00875 DNA photolyase VpaChn25_A1360 PF03441 FAD binding domain of DNA photolyase VpaChn25_A1361 PF13411 MerR HTH family regulatory protein VpaChn25_A1362 PF08349 Protein of unknown function (DUF1722) VpaChn25_A1363 PF01048 Phosphorylase superfamily VpaChn25_A1367 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1368 PF11742 Protein of unknown function (DUF3302) VpaChn25_A1369 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_A1369 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VpaChn25_A1371 PF07155 ECF-type riboflavin transporter, S component VpaChn25_A1372 PF00005 ABC transporter VpaChn25_A1372 PF12558 ATP-binding cassette cobalt transporter VpaChn25_A1375 PF12801 4Fe-4S binding domain VpaChn25_A1375 PF13237 4Fe-4S dicluster domain VpaChn25_A1376 PF12838 4Fe-4S dicluster domain VpaChn25_A1376 PF12800 4Fe-4S binding domain VpaChn25_A1377 PF00583 Acetyltransferase (GNAT) family VpaChn25_A1380 PF07238 PilZ domain VpaChn25_A1380 PF12945 Flagellar protein YcgR VpaChn25_A1381 PF00672 HAMP domain VpaChn25_A1381 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1382 PF13654 AAA domain VpaChn25_A1382 PF05362 Lon protease (S16) C-terminal proteolytic domain VpaChn25_A1385 PF00005 ABC transporter VpaChn25_A1385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VpaChn25_A1386 PF00326 Prolyl oligopeptidase family VpaChn25_A1386 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VpaChn25_A1387 PF03466 LysR substrate binding domain VpaChn25_A1387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1388 PF02652 L-lactate permease VpaChn25_A1389 PF01070 FMN-dependent dehydrogenase VpaChn25_A1391 PF00924 Mechanosensitive ion channel VpaChn25_A1392 PF00194 Eukaryotic-type carbonic anhydrase VpaChn25_A1398 PF08240 Alcohol dehydrogenase GroES-like domain VpaChn25_A1398 PF00107 Zinc-binding dehydrogenase VpaChn25_A1399 PF00155 Aminotransferase class I and II VpaChn25_A1400 PF00563 EAL domain VpaChn25_A1400 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_A1400 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_A1401 PF00497 Bacterial extracellular solute-binding proteins, family 3 VpaChn25_A1402 PF00266 Aminotransferase class-V VpaChn25_A1403 PF00080 Copper/zinc superoxide dismutase (SODC) VpaChn25_A1404 PF13426 PAS domain VpaChn25_A1404 PF00072 Response regulator receiver domain VpaChn25_A1404 PF08448 PAS fold VpaChn25_A1404 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A1404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A1405 PF00072 Response regulator receiver domain VpaChn25_A1405 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A1410 PF03466 LysR substrate binding domain VpaChn25_A1410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1411 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VpaChn25_A1419 PF03466 LysR substrate binding domain VpaChn25_A1419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1422 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VpaChn25_A1422 PF18269 T3SS EscN ATPase C-terminal domain VpaChn25_A1424 PF01706 FliG C-terminal domain VpaChn25_A1424 PF14841 FliG middle domain VpaChn25_A1424 PF14842 FliG N-terminal domain VpaChn25_A1425 PF08345 Flagellar M-ring protein C-terminal VpaChn25_A1425 PF01514 Secretory protein of YscJ/FliF family VpaChn25_A1426 PF02049 Flagellar hook-basal body complex protein FliE VpaChn25_A1427 PF00158 Sigma-54 interaction domain VpaChn25_A1427 PF00072 Response regulator receiver domain VpaChn25_A1427 PF02954 Bacterial regulatory protein, Fis family VpaChn25_A1430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VpaChn25_A1431 PF00813 FliP family VpaChn25_A1432 PF01313 Bacterial export proteins, family 3 VpaChn25_A1433 PF01311 Bacterial export proteins, family 1 VpaChn25_A1434 PF01312 FlhB HrpN YscU SpaS Family VpaChn25_A1435 PF00771 FHIPEP family VpaChn25_A1437 PF00669 Bacterial flagellin N-terminal helical region VpaChn25_A1437 PF00700 Bacterial flagellin C-terminal helical region VpaChn25_A1440 PF07195 Flagellar hook-associated protein 2 C-terminus VpaChn25_A1440 PF07196 Flagellin hook IN motif VpaChn25_A1440 PF02465 Flagellar hook-associated protein 2 N-terminus VpaChn25_A1441 PF02561 Flagellar protein FliS VpaChn25_A1444 PF03748 Flagellar basal body-associated protein FliL VpaChn25_A1445 PF04542 Sigma-70 region 2 VpaChn25_A1445 PF04545 Sigma-70, region 4 VpaChn25_A1446 PF01618 MotA/TolQ/ExbB proton channel family VpaChn25_A1447 PF00691 OmpA family VpaChn25_A1447 PF13677 Membrane MotB of proton-channel complex MotA/MotB VpaChn25_A1449 PF08000 Bacterial PH domain VpaChn25_A1457 PF04055 Radical SAM superfamily VpaChn25_A1458 PF00923 Transaldolase/Fructose-6-phosphate aldolase VpaChn25_A1460 PF00583 Acetyltransferase (GNAT) family VpaChn25_A1463 PF07690 Major Facilitator Superfamily VpaChn25_A1464 PF03466 LysR substrate binding domain VpaChn25_A1464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1465 PF00892 EamA-like transporter family VpaChn25_A1470 PF13533 Biotin-lipoyl like VpaChn25_A1472 PF01594 AI-2E family transporter VpaChn25_A1473 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VpaChn25_A1475 PF00970 Oxidoreductase FAD-binding domain VpaChn25_A1475 PF00175 Oxidoreductase NAD-binding domain VpaChn25_A1477 PF09905 DNA-binding protein VF530 VpaChn25_A1478 PF03466 LysR substrate binding domain VpaChn25_A1478 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1480 PF00881 Nitroreductase family VpaChn25_A1481 PF12833 Helix-turn-helix domain VpaChn25_A1481 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VpaChn25_A1482 PF00686 Starch binding domain VpaChn25_A1482 PF00128 Alpha amylase, catalytic domain VpaChn25_A1483 PF00768 D-alanyl-D-alanine carboxypeptidase VpaChn25_A1483 PF07943 Penicillin-binding protein 5, C-terminal domain VpaChn25_A1484 PF00561 alpha/beta hydrolase fold VpaChn25_A1487 PF18416 N-acetylglucosamine binding protein domain 2 VpaChn25_A1487 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VpaChn25_A1488 PF01734 Patatin-like phospholipase VpaChn25_A1489 PF01914 MarC family integral membrane protein VpaChn25_A1490 PF00881 Nitroreductase family VpaChn25_A1492 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VpaChn25_A1492 PF02563 Polysaccharide biosynthesis/export protein VpaChn25_A1492 PF10531 SLBB domain VpaChn25_A1493 PF01451 Low molecular weight phosphotyrosine protein phosphatase VpaChn25_A1494 PF13807 G-rich domain on putative tyrosine kinase VpaChn25_A1494 PF02706 Chain length determinant protein VpaChn25_A1494 PF13614 AAA domain VpaChn25_A1496 PF08803 Putative mono-oxygenase ydhR VpaChn25_A1497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1497 PF03466 LysR substrate binding domain VpaChn25_A1499 PF00375 Sodium:dicarboxylate symporter family VpaChn25_A1500 PF06803 Protein of unknown function (DUF1232) VpaChn25_A1501 PF01546 Peptidase family M20/M25/M40 VpaChn25_A1501 PF07687 Peptidase dimerisation domain VpaChn25_A1502 PF07670 Nucleoside recognition VpaChn25_A1503 PF07670 Nucleoside recognition VpaChn25_A1506 PF00128 Alpha amylase, catalytic domain VpaChn25_A1507 PF00912 Transglycosylase VpaChn25_A1508 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VpaChn25_A1508 PF00128 Alpha amylase, catalytic domain VpaChn25_A1508 PF02806 Alpha amylase, C-terminal all-beta domain VpaChn25_A1509 PF02446 4-alpha-glucanotransferase VpaChn25_A1510 PF00343 Carbohydrate phosphorylase VpaChn25_A1512 PF00196 Bacterial regulatory proteins, luxR family VpaChn25_A1512 PF17874 MalT-like TPR region VpaChn25_A1515 PF02630 SCO1/SenC VpaChn25_A1516 PF04314 Copper chaperone PCu(A)C VpaChn25_A1517 PF02378 Phosphotransferase system, EIIC VpaChn25_A1517 PF00367 phosphotransferase system, EIIB VpaChn25_A1518 PF03193 RsgA GTPase VpaChn25_A1519 PF00375 Sodium:dicarboxylate symporter family VpaChn25_A1521 PF08543 Phosphomethylpyrimidine kinase VpaChn25_A1523 PF13520 Amino acid permease VpaChn25_A1524 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VpaChn25_A1524 PF01276 Orn/Lys/Arg decarboxylase, major domain VpaChn25_A1524 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VpaChn25_A1527 PF03714 Bacterial pullanase-associated domain VpaChn25_A1527 PF17967 Pullulanase N2 domain VpaChn25_A1527 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VpaChn25_A1527 PF18494 Pullulanase Ins domain VpaChn25_A1527 PF11852 Domain of unknown function (DUF3372) VpaChn25_A1528 PF04231 Endonuclease I VpaChn25_A1529 PF16657 Maltogenic Amylase, C-terminal domain VpaChn25_A1529 PF02903 Alpha amylase, N-terminal ig-like domain VpaChn25_A1529 PF00128 Alpha amylase, catalytic domain VpaChn25_A1532 PF02264 LamB porin VpaChn25_A1533 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VpaChn25_A1533 PF00128 Alpha amylase, catalytic domain VpaChn25_A1535 PF07690 Major Facilitator Superfamily VpaChn25_A1537 PF01551 Peptidase family M23 VpaChn25_A1537 PF04225 Opacity-associated protein A LysM-like domain VpaChn25_A1539 PF00675 Insulinase (Peptidase family M16) VpaChn25_A1539 PF05193 Peptidase M16 inactive domain VpaChn25_A1540 PF17200 Single Cache domain 2 VpaChn25_A1540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1540 PF00672 HAMP domain VpaChn25_A1541 PF00005 ABC transporter VpaChn25_A1542 PF01032 FecCD transport family VpaChn25_A1543 PF01032 FecCD transport family VpaChn25_A1544 PF01497 Periplasmic binding protein VpaChn25_A1545 PF07660 Secretin and TonB N terminus short domain VpaChn25_A1545 PF00593 TonB dependent receptor VpaChn25_A1545 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A1546 PF07715 TonB-dependent Receptor Plug Domain VpaChn25_A1546 PF00593 TonB dependent receptor VpaChn25_A1547 PF02655 ATP-grasp domain VpaChn25_A1547 PF00206 Lyase VpaChn25_A1548 PF06276 Ferric iron reductase FhuF-like transporter VpaChn25_A1548 PF04183 IucA / IucC family VpaChn25_A1550 PF04183 IucA / IucC family VpaChn25_A1550 PF06276 Ferric iron reductase FhuF-like transporter VpaChn25_A1551 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VpaChn25_A1551 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VpaChn25_A1552 PF01547 Bacterial extracellular solute-binding protein VpaChn25_A1553 PF08521 Two-component sensor kinase N-terminal VpaChn25_A1553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A1553 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A1554 PF00486 Transcriptional regulatory protein, C terminal VpaChn25_A1554 PF00072 Response regulator receiver domain VpaChn25_A1555 PF00367 phosphotransferase system, EIIB VpaChn25_A1555 PF02378 Phosphotransferase system, EIIC VpaChn25_A1558 PF02653 Branched-chain amino acid transport system / permease component VpaChn25_A1559 PF00005 ABC transporter VpaChn25_A1560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VpaChn25_A1561 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VpaChn25_A1561 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VpaChn25_A1562 PF00596 Class II Aldolase and Adducin N-terminal domain VpaChn25_A1563 PF11762 L-arabinose isomerase C-terminal domain VpaChn25_A1563 PF02610 L-arabinose isomerase VpaChn25_A1565 PF02311 AraC-like ligand binding domain VpaChn25_A1565 PF12833 Helix-turn-helix domain VpaChn25_A1568 PF02566 OsmC-like protein VpaChn25_A1569 PF01047 MarR family VpaChn25_A1570 PF10417 C-terminal domain of 1-Cys peroxiredoxin VpaChn25_A1570 PF00578 AhpC/TSA family VpaChn25_A1571 PF13192 Thioredoxin domain VpaChn25_A1571 PF07992 Pyridine nucleotide-disulphide oxidoreductase VpaChn25_A1574 PF03466 LysR substrate binding domain VpaChn25_A1574 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1575 PF12833 Helix-turn-helix domain VpaChn25_A1575 PF01965 DJ-1/PfpI family VpaChn25_A1576 PF08281 Sigma-70, region 4 VpaChn25_A1576 PF04542 Sigma-70 region 2 VpaChn25_A1579 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VpaChn25_A1579 PF00672 HAMP domain VpaChn25_A1579 PF02743 Cache domain VpaChn25_A1580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1580 PF03466 LysR substrate binding domain VpaChn25_A1581 PF11975 Family 4 glycosyl hydrolase C-terminal domain VpaChn25_A1581 PF02056 Family 4 glycosyl hydrolase VpaChn25_A1584 PF03475 3-alpha domain VpaChn25_A1584 PF03473 MOSC domain VpaChn25_A1585 PF00271 Helicase conserved C-terminal domain VpaChn25_A1585 PF00270 DEAD/DEAH box helicase VpaChn25_A1586 PF03786 D-mannonate dehydratase (UxuA) VpaChn25_A1587 PF00392 Bacterial regulatory proteins, gntR family VpaChn25_A1587 PF07729 FCD domain VpaChn25_A1588 PF03480 Bacterial extracellular solute-binding protein, family 7 VpaChn25_A1589 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VpaChn25_A1590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VpaChn25_A1591 PF01232 Mannitol dehydrogenase Rossmann domain VpaChn25_A1591 PF08125 Mannitol dehydrogenase C-terminal domain VpaChn25_A1592 PF02614 Glucuronate isomerase VpaChn25_A1593 PF00294 pfkB family carbohydrate kinase VpaChn25_A1594 PF01081 KDPG and KHG aldolase VpaChn25_A1595 PF10688 Bacterial inner membrane protein VpaChn25_A1598 PF12833 Helix-turn-helix domain VpaChn25_A1598 PF06719 AraC-type transcriptional regulator N-terminus VpaChn25_A1600 PF00664 ABC transporter transmembrane region VpaChn25_A1600 PF00005 ABC transporter VpaChn25_A1602 PF01037 Lrp/AsnC ligand binding domain VpaChn25_A1609 PF00474 Sodium:solute symporter family VpaChn25_A1611 PF00171 Aldehyde dehydrogenase family VpaChn25_A1611 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VpaChn25_A1611 PF01619 Proline dehydrogenase VpaChn25_A1611 PF14850 DNA-binding domain of Proline dehydrogenase VpaChn25_A1612 PF12833 Helix-turn-helix domain VpaChn25_A1615 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VpaChn25_A1615 PF01243 Pyridoxamine 5'-phosphate oxidase VpaChn25_A1616 PF02743 Cache domain VpaChn25_A1616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VpaChn25_A1616 PF00512 His Kinase A (phospho-acceptor) domain VpaChn25_A1617 PF02954 Bacterial regulatory protein, Fis family VpaChn25_A1617 PF00072 Response regulator receiver domain VpaChn25_A1617 PF00158 Sigma-54 interaction domain VpaChn25_A1618 PF00529 HlyD membrane-fusion protein of T1SS VpaChn25_A1621 PF00005 ABC transporter VpaChn25_A1621 PF03412 Peptidase C39 family VpaChn25_A1621 PF00664 ABC transporter transmembrane region VpaChn25_A1628 PF03358 NADPH-dependent FMN reductase VpaChn25_A1629 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VpaChn25_A1630 PF00246 Zinc carboxypeptidase VpaChn25_A1631 PF01380 SIS domain VpaChn25_A1631 PF01418 Helix-turn-helix domain, rpiR family VpaChn25_A1632 PF01380 SIS domain VpaChn25_A1633 PF00367 phosphotransferase system, EIIB VpaChn25_A1633 PF02378 Phosphotransferase system, EIIC VpaChn25_A1634 PF00267 Gram-negative porin VpaChn25_A1635 PF03575 Peptidase family S51 VpaChn25_A1636 PF03466 LysR substrate binding domain VpaChn25_A1636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VpaChn25_A1637 PF00132 Bacterial transferase hexapeptide (six repeats) VpaChn25_A1639 PF05127 Helicase VpaChn25_A1639 PF13718 GNAT acetyltransferase 2 VpaChn25_A1640 PF08775 ParB family VpaChn25_A1640 PF02195 ParB-like nuclease domain VpaChn25_A1641 PF18607 ParA helix turn helix domain VpaChn25_A1641 PF13614 AAA domain VpaChn25_PA15 PF01751 Toprim domain VpaChn25_PA15 PF01131 DNA topoisomerase VpaChn25_PA16 PF02195 ParB-like nuclease domain VpaChn25_PA16 PF17762 HTH domain found in ParB protein VpaChn25_PA17 PF13614 AAA domain VpaChn25_PA18 PF00589 Phage integrase family VpaChn25_PA18 PF02899 Phage integrase, N-terminal SAM-like domain VpaChn25_PA24 PF06616 BsuBI/PstI restriction endonuclease domain VpaChn25_PA24 PF17728 BsuBI/PstI restriction endonuclease HTH domain VpaChn25_PA25 PF07669 Eco57I restriction-modification methylase VpaChn25_PA26 PF00665 Integrase core domain VpaChn25_PA27 PF01527 Transposase VpaChn25_PA28 PF11799 impB/mucB/samB family C-terminal domain VpaChn25_PA28 PF13438 Domain of unknown function (DUF4113) VpaChn25_PA28 PF00817 impB/mucB/samB family VpaChn25_PA29 PF00717 Peptidase S24-like VpaChn25_PB08 PF06271 RDD family VpaChn25_PB33 PF03707 Bacterial signalling protein N terminal repeat VpaChn25_PB33 PF00563 EAL domain VpaChn25_PB33 PF00990 Diguanylate cyclase, GGDEF domain VpaChn25_PB34 PF13086 AAA domain VpaChn25_PB34 PF13086 AAA domain VpaChn25_PB34 PF13195 Protein of unknown function (DUF4011) VpaChn25_PB34 PF13087 AAA domain VpaChn25_PB34 PF13087 AAA domain VpaChn25_PB34 PF13195 Protein of unknown function (DUF4011) VpaChn25_PB36 PF07510 Protein of unknown function (DUF1524) VpaChn25_PB41 PF13361 UvrD-like helicase C-terminal domain VpaChn25_PB41 PF12462 DNA helicase IV / RNA helicase N terminal VpaChn25_PB41 PF00580 UvrD/REP helicase N-terminal domain VpaChn25_PB45 PF13737 Transposase DDE domain VpaChn25_PB48 PF13356 Arm DNA-binding domain VpaChn25_PB48 PF00589 Phage integrase family VpaChn25_PB52 PF00589 Phage integrase family VpaChn25_PB56 PF00271 Helicase conserved C-terminal domain VpaChn25_PB58 PF00583 Acetyltransferase (GNAT) family VpaChn25_PC01 PF03432 Relaxase/Mobilisation nuclease domain