locus-tag class description H9K57_00005 PF00308 Bacterial dnaA protein H9K57_00005 PF08299 Bacterial dnaA protein helix-turn-helix H9K57_00005 PF11638 DnaA N-terminal domain H9K57_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H9K57_00010 PF02767 DNA polymerase III beta subunit, central domain H9K57_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H9K57_00015 PF02463 RecF/RecN/SMC N terminal domain H9K57_00020 PF01751 Toprim domain H9K57_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H9K57_00020 PF00204 DNA gyrase B H9K57_00020 PF18053 DNA gyrase B subunit insert domain H9K57_00030 PF00011 Hsp20/alpha crystallin family H9K57_00035 PF00155 Aminotransferase class I and II H9K57_00040 PF00128 Alpha amylase, catalytic domain H9K57_00045 PF02092 Glycyl-tRNA synthetase beta subunit H9K57_00045 PF05746 DALR anticodon binding domain H9K57_00050 PF02091 Glycyl-tRNA synthetase alpha subunit H9K57_00055 PF01169 Uncharacterized protein family UPF0016 H9K57_00065 PF01206 Sulfurtransferase TusA H9K57_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_00075 PF03466 LysR substrate binding domain H9K57_00080 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_00080 PF00107 Zinc-binding dehydrogenase H9K57_00085 PF02803 Thiolase, C-terminal domain H9K57_00085 PF00108 Thiolase, N-terminal domain H9K57_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K57_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K57_00090 PF00378 Enoyl-CoA hydratase/isomerase H9K57_00095 PF01205 Uncharacterized protein family UPF0029 H9K57_00095 PF09186 Domain of unknown function (DUF1949) H9K57_00100 PF02386 Cation transport protein H9K57_00105 PF12724 Flavodoxin domain H9K57_00140 PF03466 LysR substrate binding domain H9K57_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_00145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H9K57_00145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H9K57_00150 PF04380 Membrane fusogenic activity H9K57_00155 PF00873 AcrB/AcrD/AcrF family H9K57_00160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_00165 PF16295 Tetracyclin repressor-like, C-terminal domain H9K57_00165 PF00440 Bacterial regulatory proteins, tetR family H9K57_00170 PF00580 UvrD/REP helicase N-terminal domain H9K57_00170 PF13361 UvrD-like helicase C-terminal domain H9K57_00175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K57_00205 PF13419 Haloacid dehalogenase-like hydrolase H9K57_00210 PF00005 ABC transporter H9K57_00210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_00220 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_00225 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_00225 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_00255 PF00069 Protein kinase domain H9K57_00260 PF00356 Bacterial regulatory proteins, lacI family H9K57_00260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K57_00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_00265 PF03466 LysR substrate binding domain H9K57_00270 PF00893 Small Multidrug Resistance protein H9K57_00275 PF00893 Small Multidrug Resistance protein H9K57_00280 PF00920 Dehydratase family H9K57_00285 PF01202 Shikimate kinase H9K57_00290 PF02447 GntP family permease H9K57_00295 PF01081 KDPG and KHG aldolase H9K57_00300 PF01048 Phosphorylase superfamily H9K57_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_00305 PF03466 LysR substrate binding domain H9K57_00310 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_00310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K57_00315 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H9K57_00320 PF01432 Peptidase family M3 H9K57_00325 PF01037 Lrp/AsnC ligand binding domain H9K57_00330 PF08448 PAS fold H9K57_00330 PF00563 EAL domain H9K57_00330 PF00990 Diguanylate cyclase, GGDEF domain H9K57_00335 PF04445 Putative SAM-dependent methyltransferase H9K57_00345 PF00892 EamA-like transporter family H9K57_00350 PF00582 Universal stress protein family H9K57_00355 PF00210 Ferritin-like domain H9K57_00360 PF10625 Universal stress protein B (UspB) H9K57_00370 PF00158 Sigma-54 interaction domain H9K57_00370 PF02954 Bacterial regulatory protein, Fis family H9K57_00370 PF01590 GAF domain H9K57_00375 PF04972 BON domain H9K57_00425 PF01594 AI-2E family transporter H9K57_00430 PF03707 Bacterial signalling protein N terminal repeat H9K57_00430 PF00990 Diguanylate cyclase, GGDEF domain H9K57_00430 PF00563 EAL domain H9K57_00440 PF02646 RmuC family H9K57_00445 PF01209 ubiE/COQ5 methyltransferase family H9K57_00450 PF02036 SCP-2 sterol transfer family H9K57_00455 PF03109 ABC1 family H9K57_00460 PF02416 mttA/Hcf106 family H9K57_00465 PF02416 mttA/Hcf106 family H9K57_00470 PF00902 Sec-independent protein translocase protein (TatC) H9K57_00475 PF01026 TatD related DNase H9K57_00480 PF00490 Delta-aminolevulinic acid dehydratase H9K57_00495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K57_00495 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K57_00495 PF00476 DNA polymerase family A H9K57_00495 PF01612 3'-5' exonuclease H9K57_00500 PF01926 50S ribosome-binding GTPase H9K57_00505 PF00034 Cytochrome c H9K57_00515 PF04220 Der GTPase activator (YihI) H9K57_00520 PF10675 Protein of unknown function (DUF2489) H9K57_00525 PF04055 Radical SAM superfamily H9K57_00525 PF06969 HemN C-terminal domain H9K57_00530 PF00962 Adenosine/AMP deaminase H9K57_00535 PF00990 Diguanylate cyclase, GGDEF domain H9K57_00535 PF03707 Bacterial signalling protein N terminal repeat H9K57_00535 PF00563 EAL domain H9K57_00540 PF02954 Bacterial regulatory protein, Fis family H9K57_00540 PF00072 Response regulator receiver domain H9K57_00540 PF00158 Sigma-54 interaction domain H9K57_00545 PF00512 His Kinase A (phospho-acceptor) domain H9K57_00545 PF00989 PAS fold H9K57_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_00555 PF03951 Glutamine synthetase, beta-Grasp domain H9K57_00555 PF00120 Glutamine synthetase, catalytic domain H9K57_00560 PF00009 Elongation factor Tu GTP binding domain H9K57_00560 PF00679 Elongation factor G C-terminus H9K57_00560 PF03144 Elongation factor Tu domain 2 H9K57_00575 PF03631 Virulence factor BrkB H9K57_00580 PF02580 D-Tyr-tRNA(Tyr) deacylase H9K57_00585 PF00583 Acetyltransferase (GNAT) family H9K57_00585 PF09500 Putative thioesterase (yiiD_Cterm) H9K57_00595 PF01293 Phosphoenolpyruvate carboxykinase H9K57_00600 PF01430 Hsp33 protein H9K57_00605 PF01479 S4 domain H9K57_00610 PF11356 Type II secretion system protein C H9K57_00615 PF00263 Bacterial type II and III secretion system protein H9K57_00615 PF03958 Bacterial type II/III secretion system short domain H9K57_00620 PF00437 Type II/IV secretion system protein H9K57_00625 PF00482 Type II secretion system (T2SS), protein F H9K57_00630 PF07963 Prokaryotic N-terminal methylation motif H9K57_00630 PF08334 Type II secretion system (T2SS), protein G H9K57_00635 PF12019 Type II transport protein GspH H9K57_00640 PF07963 Prokaryotic N-terminal methylation motif H9K57_00640 PF02501 Type II secretion system (T2SS), protein I H9K57_00645 PF07963 Prokaryotic N-terminal methylation motif H9K57_00645 PF11612 Type II secretion system (T2SS), protein J H9K57_00650 PF03934 Type II secretion system (T2SS), protein K H9K57_00655 PF05134 Type II secretion system (T2SS), protein L H9K57_00655 PF12693 GspL periplasmic domain H9K57_00660 PF04612 Type II secretion system (T2SS), protein M H9K57_00665 PF01203 Type II secretion system (T2SS), protein N H9K57_00670 PF00459 Inositol monophosphatase family H9K57_00675 PF00293 NUDIX domain H9K57_00680 PF01106 NifU-like domain H9K57_00680 PF01521 Iron-sulphur cluster biosynthesis H9K57_00685 PF00156 Phosphoribosyl transferase domain H9K57_00690 PF00561 alpha/beta hydrolase fold H9K57_00700 PF16921 Tex protein YqgF-like domain H9K57_00700 PF00575 S1 RNA binding domain H9K57_00700 PF17674 HHH domain H9K57_00700 PF09371 Tex-like protein N-terminal domain H9K57_00710 PF03449 Transcription elongation factor, N-terminal H9K57_00710 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K57_00720 PF00072 Response regulator receiver domain H9K57_00720 PF00486 Transcriptional regulatory protein, C terminal H9K57_00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_00725 PF00672 HAMP domain H9K57_00725 PF00512 His Kinase A (phospho-acceptor) domain H9K57_00730 PF00860 Permease family H9K57_00735 PF17191 RecG wedge domain H9K57_00735 PF00270 DEAD/DEAH box helicase H9K57_00735 PF00271 Helicase conserved C-terminal domain H9K57_00740 PF12105 SpoU, rRNA methylase, C-terminal H9K57_00740 PF00588 SpoU rRNA Methylase family H9K57_00745 PF13291 ACT domain H9K57_00745 PF04607 Region found in RelA / SpoT proteins H9K57_00745 PF02824 TGS domain H9K57_00750 PF01192 RNA polymerase Rpb6 H9K57_00755 PF00625 Guanylate kinase H9K57_00770 PF02472 Biopolymer transport protein ExbD/TolR H9K57_00775 PF01618 MotA/TolQ/ExbB proton channel family H9K57_00790 PF00593 TonB dependent receptor H9K57_00790 PF07715 TonB-dependent Receptor Plug Domain H9K57_00795 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_00800 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_00800 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_00805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_00810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_00810 PF00005 ABC transporter H9K57_00815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_00815 PF00005 ABC transporter H9K57_00825 PF03755 YicC-like family, N-terminal region H9K57_00825 PF08340 Domain of unknown function (DUF1732) H9K57_00830 PF03725 3' exoribonuclease family, domain 2 H9K57_00830 PF01138 3' exoribonuclease family, domain 1 H9K57_00835 PF00156 Phosphoribosyl transferase domain H9K57_00840 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K57_00845 PF00440 Bacterial regulatory proteins, tetR family H9K57_00850 PF02441 Flavoprotein H9K57_00850 PF04127 DNA / pantothenate metabolism flavoprotein H9K57_00855 PF00672 HAMP domain H9K57_00855 PF17200 Single Cache domain 2 H9K57_00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_00860 PF04002 RadC-like JAB domain H9K57_00865 PF00830 Ribosomal L28 family H9K57_00870 PF00471 Ribosomal protein L33 H9K57_00880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H9K57_00880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H9K57_00880 PF06827 Zinc finger found in FPG and IleRS H9K57_00890 PF05686 Glycosyl transferase family 90 H9K57_00895 PF01467 Cytidylyltransferase-like H9K57_00900 PF00535 Glycosyl transferase family 2 H9K57_00905 PF00535 Glycosyl transferase family 2 H9K57_00910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K57_00915 PF01219 Prokaryotic diacylglycerol kinase H9K57_00925 PF16363 GDP-mannose 4,6 dehydratase H9K57_00930 PF00483 Nucleotidyl transferase H9K57_00940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K57_00940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K57_00960 PF00106 short chain dehydrogenase H9K57_00965 PF00501 AMP-binding enzyme H9K57_00965 PF13193 AMP-binding enzyme C-terminal domain H9K57_00970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9K57_00980 PF02719 Polysaccharide biosynthesis protein H9K57_00985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9K57_00990 PF02350 UDP-N-acetylglucosamine 2-epimerase H9K57_00995 PF03102 NeuB family H9K57_00995 PF08666 SAF domain H9K57_01005 PF00483 Nucleotidyl transferase H9K57_01010 PF02348 Cytidylyltransferase H9K57_01015 PF07922 Glycosyltransferase family 52 H9K57_01020 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H9K57_01020 PF00534 Glycosyl transferases group 1 H9K57_01025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K57_01030 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K57_01035 PF01370 NAD dependent epimerase/dehydratase family H9K57_01040 PF06082 Exopolysaccharide biosynthesis protein YbjH H9K57_01070 PF02706 Chain length determinant protein H9K57_01075 PF01467 Cytidylyltransferase-like H9K57_01090 PF00534 Glycosyl transferases group 1 H9K57_01090 PF13439 Glycosyltransferase Family 4 H9K57_01100 PF00793 DAHP synthetase I family H9K57_01105 PF02348 Cytidylyltransferase H9K57_01110 PF01380 SIS domain H9K57_01110 PF00571 CBS domain H9K57_01115 PF00534 Glycosyl transferases group 1 H9K57_01115 PF13439 Glycosyltransferase Family 4 H9K57_01130 PF02397 Bacterial sugar transferase H9K57_01135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H9K57_01135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H9K57_01135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H9K57_01140 PF00753 Metallo-beta-lactamase superfamily H9K57_01140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H9K57_01140 PF10996 Beta-Casp domain H9K57_01145 PF00121 Triosephosphate isomerase H9K57_01165 PF00455 DeoR C terminal sensor domain H9K57_01165 PF08220 DeoR-like helix-turn-helix domain H9K57_01170 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H9K57_01175 PF06005 Cell division protein ZapB H9K57_01180 PF03737 Aldolase/RraA H9K57_01185 PF01040 UbiA prenyltransferase family H9K57_01190 PF07724 AAA domain (Cdc48 subfamily) H9K57_01190 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_01195 PF00227 Proteasome subunit H9K57_01205 PF00356 Bacterial regulatory proteins, lacI family H9K57_01210 PF00270 DEAD/DEAH box helicase H9K57_01210 PF00271 Helicase conserved C-terminal domain H9K57_01210 PF17764 3′ DNA-binding domain (3′BD) H9K57_01210 PF18074 Primosomal protein N C-terminal domain H9K57_01210 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H9K57_01215 PF01197 Ribosomal protein L31 H9K57_01220 PF00338 Ribosomal protein S10p/S20e H9K57_01225 PF00297 Ribosomal protein L3 H9K57_01230 PF00573 Ribosomal protein L4/L1 family H9K57_01235 PF00276 Ribosomal protein L23 H9K57_01240 PF00181 Ribosomal Proteins L2, RNA binding domain H9K57_01240 PF03947 Ribosomal Proteins L2, C-terminal domain H9K57_01245 PF00203 Ribosomal protein S19 H9K57_01250 PF00237 Ribosomal protein L22p/L17e H9K57_01255 PF07650 KH domain H9K57_01255 PF00189 Ribosomal protein S3, C-terminal domain H9K57_01260 PF00252 Ribosomal protein L16p/L10e H9K57_01265 PF00831 Ribosomal L29 protein H9K57_01270 PF00366 Ribosomal protein S17 H9K57_01275 PF00238 Ribosomal protein L14p/L23e H9K57_01280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H9K57_01280 PF00467 KOW motif H9K57_01285 PF00281 Ribosomal protein L5 H9K57_01285 PF00673 ribosomal L5P family C-terminus H9K57_01290 PF00253 Ribosomal protein S14p/S29e H9K57_01295 PF00410 Ribosomal protein S8 H9K57_01300 PF00347 Ribosomal protein L6 H9K57_01305 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H9K57_01310 PF00333 Ribosomal protein S5, N-terminal domain H9K57_01310 PF03719 Ribosomal protein S5, C-terminal domain H9K57_01315 PF00327 Ribosomal protein L30p/L7e H9K57_01320 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H9K57_01325 PF00344 SecY translocase H9K57_01330 PF00444 Ribosomal protein L36 H9K57_01335 PF00416 Ribosomal protein S13/S18 H9K57_01340 PF00411 Ribosomal protein S11 H9K57_01345 PF01479 S4 domain H9K57_01345 PF00163 Ribosomal protein S4/S9 N-terminal domain H9K57_01350 PF01000 RNA polymerase Rpb3/RpoA insert domain H9K57_01350 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H9K57_01350 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H9K57_01355 PF01196 Ribosomal protein L17 H9K57_01365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_01365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K57_01375 PF13673 Acetyltransferase (GNAT) domain H9K57_01380 PF03880 DbpA RNA binding domain H9K57_01380 PF00270 DEAD/DEAH box helicase H9K57_01380 PF00271 Helicase conserved C-terminal domain H9K57_01390 PF02872 5'-nucleotidase, C-terminal domain H9K57_01390 PF00149 Calcineurin-like phosphoesterase H9K57_01395 PF10414 Sirohaem synthase dimerisation region H9K57_01395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K57_01395 PF14824 Sirohaem biosynthesis protein central H9K57_01400 PF01507 Phosphoadenosine phosphosulfate reductase family H9K57_01405 PF00009 Elongation factor Tu GTP binding domain H9K57_01410 PF03600 Citrate transporter H9K57_01410 PF02080 TrkA-C domain H9K57_01435 PF00005 ABC transporter H9K57_01445 PF10795 Protein of unknown function (DUF2607) H9K57_01450 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K57_01455 PF06526 Protein of unknown function (DUF1107) H9K57_01460 PF01625 Peptide methionine sulfoxide reductase H9K57_01465 PF01103 Surface antigen H9K57_01465 PF17243 POTRA domain TamA domain 1 H9K57_01470 PF04357 TamB, inner membrane protein subunit of TAM complex H9K57_01475 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like H9K57_01485 PF00719 Inorganic pyrophosphatase H9K57_01490 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H9K57_01495 PF08245 Mur ligase middle domain H9K57_01495 PF02875 Mur ligase family, glutamate ligase domain H9K57_01495 PF01225 Mur ligase family, catalytic domain H9K57_01500 PF02441 Flavoprotein H9K57_01510 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_01515 PF00005 ABC transporter H9K57_01530 PF16868 NMT1-like family H9K57_01535 PF01316 Arginine repressor, DNA binding domain H9K57_01535 PF02863 Arginine repressor, C-terminal domain H9K57_01540 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K57_01540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K57_01550 PF00348 Polyprenyl synthetase H9K57_01555 PF00829 Ribosomal prokaryotic L21 protein H9K57_01560 PF01016 Ribosomal L27 protein H9K57_01565 PF01926 50S ribosome-binding GTPase H9K57_01565 PF01018 GTP1/OBG H9K57_01570 PF06738 Putative threonine/serine exporter H9K57_01575 PF12821 Threonine/Serine exporter, ThrE H9K57_01580 PF00186 Dihydrofolate reductase H9K57_01585 PF00149 Calcineurin-like phosphoesterase H9K57_01590 PF04379 ApaG domain H9K57_01595 PF00398 Ribosomal RNA adenine dimethylase H9K57_01600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H9K57_01605 PF09312 SurA N-terminal domain H9K57_01610 PF03968 OstA-like protein H9K57_01610 PF04453 LPS transport system D H9K57_01615 PF00226 DnaJ domain H9K57_01615 PF05099 Tellurite resistance protein TerB H9K57_01625 PF00694 Aconitase C-terminal domain H9K57_01630 PF00330 Aconitase family (aconitate hydratase) H9K57_01635 PF00180 Isocitrate/isopropylmalate dehydrogenase H9K57_01640 PF00682 HMGL-like H9K57_01640 PF08502 LeuA allosteric (dimerisation) domain H9K57_01650 PF01569 PAP2 superfamily H9K57_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_01660 PF03466 LysR substrate binding domain H9K57_01665 PF00501 AMP-binding enzyme H9K57_01670 PF00205 Thiamine pyrophosphate enzyme, central domain H9K57_01670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K57_01670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K57_01675 PF10369 Small subunit of acetolactate synthase H9K57_01680 PF00990 Diguanylate cyclase, GGDEF domain H9K57_01690 PF00224 Pyruvate kinase, barrel domain H9K57_01690 PF02887 Pyruvate kinase, alpha/beta domain H9K57_01695 PF00455 DeoR C terminal sensor domain H9K57_01695 PF08220 DeoR-like helix-turn-helix domain H9K57_01700 PF01380 SIS domain H9K57_01710 PF00486 Transcriptional regulatory protein, C terminal H9K57_01710 PF00072 Response regulator receiver domain H9K57_01715 PF00512 His Kinase A (phospho-acceptor) domain H9K57_01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_01715 PF00672 HAMP domain H9K57_01720 PF00465 Iron-containing alcohol dehydrogenase H9K57_01725 PF02733 Dak1 domain H9K57_01730 PF02734 DAK2 domain H9K57_01735 PF00391 PEP-utilising enzyme, mobile domain H9K57_01735 PF02896 PEP-utilising enzyme, TIM barrel domain H9K57_01735 PF05524 PEP-utilising enzyme, N-terminal H9K57_01740 PF02954 Bacterial regulatory protein, Fis family H9K57_01740 PF00989 PAS fold H9K57_01740 PF00158 Sigma-54 interaction domain H9K57_01745 PF05068 Mannitol repressor H9K57_01750 PF01232 Mannitol dehydrogenase Rossmann domain H9K57_01750 PF08125 Mannitol dehydrogenase C-terminal domain H9K57_01755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_01755 PF02378 Phosphotransferase system, EIIC H9K57_01755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_01785 PF03180 NLPA lipoprotein H9K57_01820 PF03432 Relaxase/Mobilisation nuclease domain H9K57_01820 PF18821 Large polyvalent protein-associated domain 7 H9K57_01850 PF00589 Phage integrase family H9K57_01860 PF00140 Sigma-70 factor, region 1.2 H9K57_01860 PF04542 Sigma-70 region 2 H9K57_01860 PF04539 Sigma-70 region 3 H9K57_01860 PF04545 Sigma-70, region 4 H9K57_01860 PF04546 Sigma-70, non-essential region H9K57_01860 PF03979 Sigma-70 factor, region 1.1 H9K57_01865 PF10410 DnaB-helicase binding domain of primase H9K57_01865 PF08278 DNA primase DnaG DnaB-binding H9K57_01865 PF08275 DNA primase catalytic core, N-terminal domain H9K57_01865 PF01807 CHC2 zinc finger H9K57_01870 PF09424 Yqey-like protein H9K57_01875 PF01165 Ribosomal protein S21 H9K57_01880 PF00814 Glycoprotease family H9K57_01885 PF12697 Alpha/beta hydrolase family H9K57_01890 PF02660 Glycerol-3-phosphate acyltransferase H9K57_01895 PF02152 Dihydroneopterin aldolase H9K57_01900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K57_01905 PF02673 Bacitracin resistance protein BacA H9K57_01910 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K57_01910 PF01966 HD domain H9K57_01910 PF01743 Poly A polymerase head domain H9K57_01915 PF01471 Putative peptidoglycan binding domain H9K57_01915 PF13401 AAA domain H9K57_01925 PF08239 Bacterial SH3 domain H9K57_01930 PF01384 Phosphate transporter family H9K57_01935 PF01865 Protein of unknown function DUF47 H9K57_01940 PF01928 CYTH domain H9K57_01950 PF00672 HAMP domain H9K57_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_01955 PF08335 GlnD PII-uridylyltransferase H9K57_01955 PF03710 Glutamate-ammonia ligase adenylyltransferase H9K57_01960 PF01467 Cytidylyltransferase-like H9K57_01960 PF00294 pfkB family carbohydrate kinase H9K57_01965 PF02321 Outer membrane efflux protein H9K57_01970 PF00293 NUDIX domain H9K57_01975 PF06853 Protein of unknown function (DUF1249) H9K57_01980 PF00149 Calcineurin-like phosphoesterase H9K57_01985 PF05728 Uncharacterised protein family (UPF0227) H9K57_01990 PF00204 DNA gyrase B H9K57_01990 PF00986 DNA gyrase B subunit, carboxyl terminus H9K57_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_01990 PF01751 Toprim domain H9K57_01995 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K57_01995 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K57_02000 PF13180 PDZ domain H9K57_02005 PF00595 PDZ domain H9K57_02010 PF06295 Protein of unknown function (DUF1043) H9K57_02015 PF03969 AFG1-like ATPase H9K57_02020 PF00572 Ribosomal protein L13 H9K57_02025 PF00380 Ribosomal protein S9/S16 H9K57_02030 PF00355 Rieske [2Fe-2S] domain H9K57_02030 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H9K57_02035 PF00033 Cytochrome b/b6/petB H9K57_02035 PF00032 Cytochrome b(C-terminal)/b6/petD H9K57_02040 PF02167 Cytochrome C1 family H9K57_02045 PF00043 Glutathione S-transferase, C-terminal domain H9K57_02045 PF02798 Glutathione S-transferase, N-terminal domain H9K57_02050 PF04386 Stringent starvation protein B H9K57_02055 PF04972 BON domain H9K57_02060 PF13580 SIS domain H9K57_02065 PF02021 Uncharacterised protein family UPF0102 H9K57_02070 PF04348 LppC putative lipoprotein H9K57_02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K57_02085 PF01795 MraW methylase family H9K57_02090 PF04999 Cell division protein FtsL H9K57_02095 PF00905 Penicillin binding protein transpeptidase domain H9K57_02095 PF03717 Penicillin-binding Protein dimerisation domain H9K57_02100 PF08245 Mur ligase middle domain H9K57_02100 PF02875 Mur ligase family, glutamate ligase domain H9K57_02100 PF01225 Mur ligase family, catalytic domain H9K57_02105 PF01225 Mur ligase family, catalytic domain H9K57_02105 PF02875 Mur ligase family, glutamate ligase domain H9K57_02105 PF08245 Mur ligase middle domain H9K57_02110 PF00953 Glycosyl transferase family 4 H9K57_02110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H9K57_02115 PF08245 Mur ligase middle domain H9K57_02115 PF02875 Mur ligase family, glutamate ligase domain H9K57_02120 PF01098 Cell cycle protein H9K57_02125 PF03033 Glycosyltransferase family 28 N-terminal domain H9K57_02125 PF04101 Glycosyltransferase family 28 C-terminal domain H9K57_02130 PF08245 Mur ligase middle domain H9K57_02130 PF02875 Mur ligase family, glutamate ligase domain H9K57_02130 PF01225 Mur ligase family, catalytic domain H9K57_02135 PF08478 POTRA domain, FtsQ-type H9K57_02135 PF03799 Cell division protein FtsQ H9K57_02140 PF02491 SHS2 domain inserted in FTSA H9K57_02145 PF12327 FtsZ family, C-terminal domain H9K57_02145 PF00091 Tubulin/FtsZ family, GTPase domain H9K57_02150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H9K57_02160 PF07517 SecA DEAD-like domain H9K57_02160 PF02810 SEC-C motif H9K57_02160 PF07516 SecA Wing and Scaffold domain H9K57_02160 PF01043 SecA preprotein cross-linking domain H9K57_02165 PF00293 NUDIX domain H9K57_02170 PF05173 Dihydrodipicolinate reductase, C-terminus H9K57_02170 PF01113 Dihydrodipicolinate reductase, N-terminus H9K57_02175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H9K57_02175 PF00117 Glutamine amidotransferase class-I H9K57_02180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K57_02180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H9K57_02180 PF02142 MGS-like domain H9K57_02190 PF01925 Sulfite exporter TauE/SafE H9K57_02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_02195 PF03466 LysR substrate binding domain H9K57_02200 PF03458 UPF0126 domain H9K57_02205 PF01497 Periplasmic binding protein H9K57_02210 PF17113 Regulatory signalling modulator protein AmpE H9K57_02210 PF03186 CobD/Cbib protein H9K57_02215 PF01048 Phosphorylase superfamily H9K57_02225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K57_02225 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_02230 PF01493 GXGXG motif H9K57_02230 PF00310 Glutamine amidotransferases class-II H9K57_02230 PF01645 Conserved region in glutamate synthase H9K57_02230 PF04898 Glutamate synthase central domain H9K57_02235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K57_02235 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_02240 PF01493 GXGXG motif H9K57_02240 PF04898 Glutamate synthase central domain H9K57_02240 PF00310 Glutamine amidotransferases class-II H9K57_02240 PF01645 Conserved region in glutamate synthase H9K57_02245 PF04055 Radical SAM superfamily H9K57_02245 PF16199 Radical_SAM C-terminal domain H9K57_02250 PF01590 GAF domain H9K57_02250 PF00990 Diguanylate cyclase, GGDEF domain H9K57_02250 PF00360 Phytochrome region H9K57_02250 PF00563 EAL domain H9K57_02255 PF00072 Response regulator receiver domain H9K57_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_02255 PF00512 His Kinase A (phospho-acceptor) domain H9K57_02255 PF01627 Hpt domain H9K57_02255 PF00989 PAS fold H9K57_02255 PF18415 Histidine kinase receptor ArcB trans-membrane domain H9K57_02265 PF00072 Response regulator receiver domain H9K57_02265 PF00486 Transcriptional regulatory protein, C terminal H9K57_02275 PF03737 Aldolase/RraA H9K57_02285 PF00696 Amino acid kinase family H9K57_02285 PF01842 ACT domain H9K57_02285 PF13840 ACT domain H9K57_02285 PF00742 Homoserine dehydrogenase H9K57_02285 PF03447 Homoserine dehydrogenase, NAD binding domain H9K57_02290 PF08544 GHMP kinases C terminal H9K57_02290 PF00288 GHMP kinases N terminal domain H9K57_02295 PF14821 Threonine synthase N terminus H9K57_02295 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_02300 PF01228 Glycine radical H9K57_02305 PF01261 Xylose isomerase-like TIM barrel H9K57_02310 PF03167 Uracil DNA glycosylase superfamily H9K57_02325 PF01235 Sodium:alanine symporter family H9K57_02330 PF03883 Peroxide stress protein YaaA H9K57_02335 PF00270 DEAD/DEAH box helicase H9K57_02335 PF00271 Helicase conserved C-terminal domain H9K57_02340 PF05175 Methyltransferase small domain H9K57_02345 PF05525 Branched-chain amino acid transport protein H9K57_02350 PF00258 Flavodoxin H9K57_02355 PF02899 Phage integrase, N-terminal SAM-like domain H9K57_02355 PF00589 Phage integrase family H9K57_02360 PF10411 Disulfide bond isomerase protein N-terminus H9K57_02360 PF13098 Thioredoxin-like domain H9K57_02365 PF17768 RecJ OB domain H9K57_02365 PF01368 DHH family H9K57_02365 PF02272 DHHA1 domain H9K57_02375 PF00152 tRNA synthetases class II (D, K and N) H9K57_02375 PF01336 OB-fold nucleic acid binding domain H9K57_02380 PF00158 Sigma-54 interaction domain H9K57_02380 PF00072 Response regulator receiver domain H9K57_02380 PF02954 Bacterial regulatory protein, Fis family H9K57_02390 PF00248 Aldo/keto reductase family H9K57_02400 PF02976 DNA mismatch repair enzyme MutH H9K57_02405 PF00293 NUDIX domain H9K57_02410 PF00391 PEP-utilising enzyme, mobile domain H9K57_02410 PF01590 GAF domain H9K57_02410 PF02896 PEP-utilising enzyme, TIM barrel domain H9K57_02410 PF05524 PEP-utilising enzyme, N-terminal H9K57_02415 PF01925 Sulfite exporter TauE/SafE H9K57_02420 PF01790 Prolipoprotein diacylglyceryl transferase H9K57_02425 PF00303 Thymidylate synthase H9K57_02435 PF02690 Na+/Pi-cotransporter H9K57_02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_02440 PF03466 LysR substrate binding domain H9K57_02445 PF01022 Bacterial regulatory protein, arsR family H9K57_02450 PF01649 Ribosomal protein S20 H9K57_02455 PF03023 Lipid II flippase MurJ H9K57_02460 PF06574 FAD synthetase H9K57_02460 PF01687 Riboflavin kinase H9K57_02465 PF06827 Zinc finger found in FPG and IleRS H9K57_02465 PF00133 tRNA synthetases class I (I, L, M and V) H9K57_02465 PF08264 Anticodon-binding domain of tRNA H9K57_02470 PF01252 Signal peptidase (SPase) II H9K57_02475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_02480 PF02401 LytB protein H9K57_02485 PF00072 Response regulator receiver domain H9K57_02485 PF04397 LytTr DNA-binding domain H9K57_02490 PF06580 Histidine kinase H9K57_02490 PF07694 5TMR of 5TMR-LYT H9K57_02495 PF02554 Carbon starvation protein CstA H9K57_02510 PF13580 SIS domain H9K57_02515 PF03702 Anhydro-N-acetylmuramic acid kinase H9K57_02520 PF00933 Glycosyl hydrolase family 3 N terminal domain H9K57_02525 PF00793 DAHP synthetase I family H9K57_02530 PF02153 Prephenate dehydrogenase H9K57_02530 PF01817 Chorismate mutase type II H9K57_02535 PF01551 Peptidase family M23 H9K57_02535 PF04225 Opacity-associated protein A LysM-like domain H9K57_02540 PF07238 PilZ domain H9K57_02545 PF00005 ABC transporter H9K57_02545 PF12848 ABC transporter H9K57_02550 PF14718 Soluble lytic murein transglycosylase L domain H9K57_02550 PF01464 Transglycosylase SLT domain H9K57_02555 PF01371 Trp repressor protein H9K57_02560 PF01931 Protein of unknown function DUF84 H9K57_02565 PF00800 Prephenate dehydratase H9K57_02565 PF01817 Chorismate mutase type II H9K57_02570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K57_02575 PF01464 Transglycosylase SLT domain H9K57_02580 PF13525 Outer membrane lipoprotein H9K57_02585 PF00849 RNA pseudouridylate synthase H9K57_02585 PF01479 S4 domain H9K57_02590 PF02578 Multi-copper polyphenol oxidoreductase laccase H9K57_02595 PF02861 Clp amino terminal domain, pathogenicity island component H9K57_02595 PF10431 C-terminal, D2-small domain, of ClpB protein H9K57_02595 PF17871 AAA lid domain H9K57_02595 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_02595 PF07724 AAA domain (Cdc48 subfamily) H9K57_02620 PF03411 Penicillin-insensitive murein endopeptidase H9K57_02630 PF00037 4Fe-4S binding domain H9K57_02635 PF01136 Peptidase family U32 H9K57_02635 PF16325 Peptidase family U32 C-terminal domain H9K57_02640 PF04381 Putative exonuclease, RdgC H9K57_02645 PF00072 Response regulator receiver domain H9K57_02645 PF00486 Transcriptional regulatory protein, C terminal H9K57_02650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_02650 PF00512 His Kinase A (phospho-acceptor) domain H9K57_02650 PF00989 PAS fold H9K57_02650 PF11808 Phosphate regulon sensor protein PhoR H9K57_02655 PF12849 PBP superfamily domain H9K57_02660 PF02541 Ppx/GppA phosphatase family H9K57_02665 PF13089 Polyphosphate kinase N-terminal domain H9K57_02665 PF17941 Polyphosphate kinase C-terminal domain 1 H9K57_02665 PF13090 Polyphosphate kinase C-terminal domain 2 H9K57_02665 PF02503 Polyphosphate kinase middle domain H9K57_02670 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_02675 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_02680 PF00005 ABC transporter H9K57_02685 PF01895 PhoU domain H9K57_02690 PF03976 Polyphosphate kinase 2 (PPK2) H9K57_02695 PF03932 CutC family H9K57_02700 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K57_02700 PF00578 AhpC/TSA family H9K57_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_02705 PF03466 LysR substrate binding domain H9K57_02710 PF01274 Malate synthase H9K57_02715 PF00463 Isocitrate lyase family H9K57_02720 PF00571 CBS domain H9K57_02730 PF02547 Queuosine biosynthesis protein H9K57_02735 PF01702 Queuine tRNA-ribosyltransferase H9K57_02740 PF02699 Preprotein translocase subunit H9K57_02745 PF13721 SecD export protein N-terminal TM region H9K57_02745 PF02355 Protein export membrane protein H9K57_02745 PF07549 SecD/SecF GG Motif H9K57_02750 PF07549 SecD/SecF GG Motif H9K57_02750 PF02355 Protein export membrane protein H9K57_02755 PF00459 Inositol monophosphatase family H9K57_02760 PF00588 SpoU rRNA Methylase family H9K57_02765 PF02082 Transcriptional regulator H9K57_02770 PF00266 Aminotransferase class-V H9K57_02775 PF01592 NifU-like N terminal domain H9K57_02780 PF01521 Iron-sulphur cluster biosynthesis H9K57_02785 PF00226 DnaJ domain H9K57_02785 PF07743 HSCB C-terminal oligomerisation domain H9K57_02790 PF00012 Hsp70 protein H9K57_02795 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_02800 PF04384 Iron-sulphur cluster assembly H9K57_02805 PF12404 Peptidase H9K57_02805 PF00883 Cytosol aminopeptidase family, catalytic domain H9K57_02810 PF00334 Nucleoside diphosphate kinase H9K57_02815 PF04055 Radical SAM superfamily H9K57_02820 PF13464 Domain of unknown function (DUF4115) H9K57_02825 PF04551 GcpE protein H9K57_02830 PF03129 Anticodon binding domain H9K57_02830 PF13393 Histidyl-tRNA synthetase H9K57_02835 PF09976 Tetratricopeptide repeat-like domain H9K57_02840 PF13360 PQQ-like domain H9K57_02845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H9K57_02845 PF01926 50S ribosome-binding GTPase H9K57_02860 PF02601 Exonuclease VII, large subunit H9K57_02860 PF13742 OB-fold nucleic acid binding domain H9K57_02865 PF00478 IMP dehydrogenase / GMP reductase domain H9K57_02865 PF00571 CBS domain H9K57_02870 PF00117 Glutamine amidotransferase class-I H9K57_02870 PF00958 GMP synthase C terminal domain H9K57_02870 PF02540 NAD synthase H9K57_02875 PF03553 Na+/H+ antiporter family H9K57_02880 PF06483 Chitinase C H9K57_02880 PF00704 Glycosyl hydrolases family 18 H9K57_02885 PF01184 GPR1/FUN34/yaaH family H9K57_02895 PF01235 Sodium:alanine symporter family H9K57_02900 PF01266 FAD dependent oxidoreductase H9K57_02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_02905 PF03466 LysR substrate binding domain H9K57_02920 PF07969 Amidohydrolase family H9K57_02925 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K57_02930 PF00202 Aminotransferase class-III H9K57_02950 PF00583 Acetyltransferase (GNAT) family H9K57_02950 PF00795 Carbon-nitrogen hydrolase H9K57_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_02955 PF03466 LysR substrate binding domain H9K57_02985 PF05930 Prophage CP4-57 regulatory protein (AlpA) H9K57_03000 PF02796 Helix-turn-helix domain of resolvase H9K57_03000 PF00239 Resolvase, N terminal domain H9K57_03005 PF02384 N-6 DNA Methylase H9K57_03010 PF01420 Type I restriction modification DNA specificity domain H9K57_03015 PF11867 Domain of unknown function (DUF3387) H9K57_03015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H9K57_03015 PF18766 SWI2/SNF2 ATPase H9K57_03020 PF07728 AAA domain (dynein-related subfamily) H9K57_03020 PF12102 Domain of unknown function (DUF3578) H9K57_03040 PF01668 SmpB protein H9K57_03045 PF03364 Polyketide cyclase / dehydrase and lipid transport H9K57_03050 PF03658 RnfH family Ubiquitin H9K57_03055 PF04355 SmpA / OmlA family H9K57_03060 PF02463 RecF/RecN/SMC N terminal domain H9K57_03070 PF01513 ATP-NAD kinase H9K57_03075 PF01025 GrpE H9K57_03080 PF00375 Sodium:dicarboxylate symporter family H9K57_03085 PF00012 Hsp70 protein H9K57_03090 PF01556 DnaJ C terminal domain H9K57_03090 PF00226 DnaJ domain H9K57_03090 PF00684 DnaJ central domain H9K57_03095 PF00114 Pilin (bacterial filament) H9K57_03095 PF07963 Prokaryotic N-terminal methylation motif H9K57_03100 PF07963 Prokaryotic N-terminal methylation motif H9K57_03100 PF00114 Pilin (bacterial filament) H9K57_03120 PF03806 AbgT putative transporter family H9K57_03125 PF14437 MafB19-like deaminase H9K57_03130 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_03130 PF01464 Transglycosylase SLT domain H9K57_03135 PF02769 AIR synthase related protein, C-terminal domain H9K57_03135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H9K57_03135 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H9K57_03160 PF01546 Peptidase family M20/M25/M40 H9K57_03160 PF07687 Peptidase dimerisation domain H9K57_03165 PF00860 Permease family H9K57_03170 PF00156 Phosphoribosyl transferase domain H9K57_03175 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) H9K57_03180 PF07417 Sigma factor-binding transcriptional regulator Crl H9K57_03185 PF00696 Amino acid kinase family H9K57_03185 PF01472 PUA domain H9K57_03190 PF00171 Aldehyde dehydrogenase family H9K57_03195 PF03477 ATP cone domain H9K57_03200 PF01872 RibD C-terminal domain H9K57_03200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K57_03205 PF00677 Lumazine binding domain H9K57_03210 PF00925 GTP cyclohydrolase II H9K57_03210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K57_03215 PF00885 6,7-dimethyl-8-ribityllumazine synthase H9K57_03220 PF01029 NusB family H9K57_03225 PF00586 AIR synthase related protein, N-terminal domain H9K57_03225 PF02769 AIR synthase related protein, C-terminal domain H9K57_03230 PF04608 Phosphatidylglycerophosphatase A H9K57_03235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H9K57_03235 PF02779 Transketolase, pyrimidine binding domain H9K57_03235 PF02780 Transketolase, C-terminal domain H9K57_03240 PF00348 Polyprenyl synthetase H9K57_03245 PF02609 Exonuclease VII small subunit H9K57_03250 PF01618 MotA/TolQ/ExbB proton channel family H9K57_03255 PF00691 OmpA family H9K57_03260 PF02568 Thiamine biosynthesis protein (ThiI) H9K57_03260 PF02926 THUMP domain H9K57_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_03265 PF03466 LysR substrate binding domain H9K57_03275 PF04241 Protein of unknown function (DUF423) H9K57_03280 PF18125 RlmM ferredoxin-like domain H9K57_03280 PF01728 FtsJ-like methyltransferase H9K57_03285 PF01223 DNA/RNA non-specific endonuclease H9K57_03290 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K57_03290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K57_03295 PF03641 Possible lysine decarboxylase H9K57_03295 PF11892 Domain of unknown function (DUF3412) H9K57_03295 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H9K57_03300 PF00990 Diguanylate cyclase, GGDEF domain H9K57_03310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H9K57_03310 PF14489 QueF-like protein H9K57_03315 PF07348 Syd protein (SUKH-2) H9K57_03320 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) H9K57_03325 PF03180 NLPA lipoprotein H9K57_03330 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_03335 PF00005 ABC transporter H9K57_03335 PF09383 NIL domain H9K57_03345 PF00356 Bacterial regulatory proteins, lacI family H9K57_03350 PF00367 phosphotransferase system, EIIB H9K57_03350 PF02378 Phosphotransferase system, EIIC H9K57_03355 PF00128 Alpha amylase, catalytic domain H9K57_03355 PF16657 Maltogenic Amylase, C-terminal domain H9K57_03370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K57_03370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H9K57_03375 PF00464 Serine hydroxymethyltransferase H9K57_03380 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H9K57_03380 PF04055 Radical SAM superfamily H9K57_03385 PF03099 Biotin/lipoate A/B protein ligase family H9K57_03390 PF04359 Protein of unknown function (DUF493) H9K57_03395 PF07943 Penicillin-binding protein 5, C-terminal domain H9K57_03395 PF00768 D-alanyl-D-alanine carboxypeptidase H9K57_03400 PF03330 Lytic transglycolase H9K57_03400 PF05036 Sporulation related domain H9K57_03405 PF01098 Cell cycle protein H9K57_03410 PF03717 Penicillin-binding Protein dimerisation domain H9K57_03410 PF00905 Penicillin binding protein transpeptidase domain H9K57_03415 PF02590 Predicted SPOUT methyltransferase H9K57_03425 PF06144 DNA polymerase III, delta subunit H9K57_03425 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H9K57_03430 PF04390 Lipopolysaccharide-assembly H9K57_03435 PF08264 Anticodon-binding domain of tRNA H9K57_03435 PF00133 tRNA synthetases class I (I, L, M and V) H9K57_03435 PF13603 Leucyl-tRNA synthetase, Domain 2 H9K57_03440 PF07295 Zinc-ribbon containing domain H9K57_03445 PF00795 Carbon-nitrogen hydrolase H9K57_03450 PF00571 CBS domain H9K57_03450 PF03471 Transporter associated domain H9K57_03455 PF02130 Uncharacterized protein family UPF0054 H9K57_03460 PF02562 PhoH-like protein H9K57_03465 PF04055 Radical SAM superfamily H9K57_03465 PF01938 TRAM domain H9K57_03465 PF00919 Uncharacterized protein family UPF0004 H9K57_03470 PF01494 FAD binding domain H9K57_03585 PF01926 50S ribosome-binding GTPase H9K57_03585 PF06071 Protein of unknown function (DUF933) H9K57_03590 PF01195 Peptidyl-tRNA hydrolase H9K57_03595 PF14572 Phosphoribosyl synthetase-associated domain H9K57_03595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H9K57_03600 PF08544 GHMP kinases C terminal H9K57_03600 PF00288 GHMP kinases N terminal domain H9K57_03605 PF03550 Outer membrane lipoprotein LolB H9K57_03610 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H9K57_03610 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H9K57_03610 PF01488 Shikimate / quinate 5-dehydrogenase H9K57_03615 PF03462 PCRF domain H9K57_03615 PF00472 RF-1 domain H9K57_03620 PF17827 PrmC N-terminal domain H9K57_03620 PF13847 Methyltransferase domain H9K57_03625 PF04247 Invasion gene expression up-regulator, SirB H9K57_03630 PF13369 Transglutaminase-like superfamily H9K57_03635 PF00793 DAHP synthetase I family H9K57_03640 PF02872 5'-nucleotidase, C-terminal domain H9K57_03640 PF00149 Calcineurin-like phosphoesterase H9K57_03645 PF04073 Aminoacyl-tRNA editing domain H9K57_03650 PF00849 RNA pseudouridylate synthase H9K57_03650 PF01479 S4 domain H9K57_03655 PF01713 Smr domain H9K57_03675 PF03173 Putative carbohydrate binding domain H9K57_03675 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain H9K57_03675 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K57_03675 PF02838 Glycosyl hydrolase family 20, domain 2 H9K57_03690 PF00403 Heavy-metal-associated domain H9K57_03695 PF13609 Gram-negative porin H9K57_03700 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K57_03705 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K57_03710 PF01389 OmpA-like transmembrane domain H9K57_03710 PF00691 OmpA family H9K57_03755 PF01584 CheW-like domain H9K57_03755 PF00072 Response regulator receiver domain H9K57_03760 PF03705 CheR methyltransferase, all-alpha domain H9K57_03760 PF01739 CheR methyltransferase, SAM binding domain H9K57_03765 PF00460 Flagella basal body rod protein H9K57_03770 PF00460 Flagella basal body rod protein H9K57_03770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_03775 PF13860 FlgD Ig-like domain H9K57_03775 PF03963 Flagellar hook capping protein - N-terminal region H9K57_03775 PF13861 FlgD Tudor-like domain H9K57_03780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_03780 PF00460 Flagella basal body rod protein H9K57_03780 PF07559 Flagellar basal body protein FlaE H9K57_03785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_03785 PF00460 Flagella basal body rod protein H9K57_03790 PF00460 Flagella basal body rod protein H9K57_03790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_03795 PF02107 Flagellar L-ring protein H9K57_03800 PF02119 Flagellar P-ring protein H9K57_03805 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K57_03805 PF10135 Rod binding protein H9K57_03810 PF07196 Flagellin hook IN motif H9K57_03810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_03815 PF00669 Bacterial flagellin N-terminal helical region H9K57_03820 PF00669 Bacterial flagellin N-terminal helical region H9K57_03820 PF00700 Bacterial flagellin C-terminal helical region H9K57_03820 PF07196 Flagellin hook IN motif H9K57_03830 PF00700 Bacterial flagellin C-terminal helical region H9K57_03830 PF00669 Bacterial flagellin N-terminal helical region H9K57_03830 PF07196 Flagellin hook IN motif H9K57_03835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9K57_03840 PF05524 PEP-utilising enzyme, N-terminal H9K57_03840 PF00391 PEP-utilising enzyme, mobile domain H9K57_03840 PF02896 PEP-utilising enzyme, TIM barrel domain H9K57_03845 PF00381 PTS HPr component phosphorylation site H9K57_03850 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_03860 PF04354 ZipA, C-terminal FtsZ-binding domain H9K57_03865 PF00533 BRCA1 C Terminus (BRCT) domain H9K57_03865 PF01653 NAD-dependent DNA ligase adenylation domain H9K57_03865 PF03120 NAD-dependent DNA ligase OB-fold domain H9K57_03865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H9K57_03865 PF12826 Helix-hairpin-helix motif H9K57_03870 PF03573 outer membrane porin, OprD family H9K57_03885 PF16200 C-terminal region of band_7 H9K57_03885 PF01145 SPFH domain / Band 7 family H9K57_03890 PF00085 Thioredoxin H9K57_03895 PF00106 short chain dehydrogenase H9K57_03900 PF01370 NAD dependent epimerase/dehydratase family H9K57_03900 PF08338 Domain of unknown function (DUF1731) H9K57_03905 PF07556 Protein of unknown function (DUF1538) H9K57_03910 PF07556 Protein of unknown function (DUF1538) H9K57_03925 PF12850 Calcineurin-like phosphoesterase superfamily domain H9K57_03940 PF17323 Trans-membrane regulatory protein ToxS H9K57_03945 PF00486 Transcriptional regulatory protein, C terminal H9K57_03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_03950 PF00183 Hsp90 protein H9K57_03955 PF05191 Adenylate kinase, active site lid H9K57_03960 PF00762 Ferrochelatase H9K57_03965 PF00854 POT family H9K57_03970 PF02357 Transcription termination factor nusG H9K57_03975 PF00733 Asparagine synthase H9K57_03975 PF13537 Glutamine amidotransferase domain H9K57_03980 PF00999 Sodium/hydrogen exchanger family H9K57_03980 PF02254 TrkA-N domain H9K57_03985 PF01047 MarR family H9K57_03985 PF00480 ROK family H9K57_03990 PF01979 Amidohydrolase family H9K57_03995 PF00367 phosphotransferase system, EIIB H9K57_03995 PF02378 Phosphotransferase system, EIIC H9K57_04000 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K57_04000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H9K57_04005 PF01475 Ferric uptake regulator family H9K57_04015 PF00258 Flavodoxin H9K57_04025 PF12697 Alpha/beta hydrolase family H9K57_04030 PF03925 SeqA protein C-terminal domain H9K57_04030 PF17206 SeqA protein N-terminal domain H9K57_04035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K57_04035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K57_04035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K57_04035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K57_04045 PF01784 NIF3 (NGG1p interacting factor 3) H9K57_04050 PF00285 Citrate synthase, C-terminal domain H9K57_04055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K57_04060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K57_04065 PF00890 FAD binding domain H9K57_04065 PF02910 Fumarate reductase flavoprotein C-term H9K57_04070 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K57_04075 PF16078 2-oxoglutarate dehydrogenase N-terminus H9K57_04075 PF00676 Dehydrogenase E1 component H9K57_04075 PF16870 2-oxoglutarate dehydrogenase C-terminal H9K57_04075 PF02779 Transketolase, pyrimidine binding domain H9K57_04080 PF02817 e3 binding domain H9K57_04080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K57_04080 PF00364 Biotin-requiring enzyme H9K57_04085 PF08442 ATP-grasp domain H9K57_04085 PF00549 CoA-ligase H9K57_04090 PF00549 CoA-ligase H9K57_04090 PF02629 CoA binding domain H9K57_04095 PF00950 ABC 3 transport family H9K57_04100 PF00005 ABC transporter H9K57_04105 PF01297 Zinc-uptake complex component A periplasmic H9K57_04110 PF02311 AraC-like ligand binding domain H9K57_04110 PF12833 Helix-turn-helix domain H9K57_04115 PF04023 FeoA domain H9K57_04120 PF07664 Ferrous iron transport protein B C terminus H9K57_04120 PF17910 FeoB cytosolic helical domain H9K57_04120 PF02421 Ferrous iron transport protein B H9K57_04120 PF07670 Nucleoside recognition H9K57_04135 PF03485 Arginyl tRNA synthetase N terminal domain H9K57_04135 PF05746 DALR anticodon binding domain H9K57_04135 PF00750 tRNA synthetases class I (R) H9K57_04140 PF06185 YecM protein H9K57_04145 PF01842 ACT domain H9K57_04145 PF00551 Formyl transferase H9K57_04150 PF04851 Type III restriction enzyme, res subunit H9K57_04150 PF13307 Helicase C-terminal domain H9K57_04155 PF00814 Glycoprotease family H9K57_04170 PF00561 alpha/beta hydrolase fold H9K57_04175 PF00501 AMP-binding enzyme H9K57_04175 PF13193 AMP-binding enzyme C-terminal domain H9K57_04180 PF01612 3'-5' exonuclease H9K57_04180 PF00570 HRDC domain H9K57_04185 PF03776 Septum formation topological specificity factor MinE H9K57_04190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9K57_04195 PF05209 Septum formation inhibitor MinC, N-terminal domain H9K57_04195 PF03775 Septum formation inhibitor MinC, C-terminal domain H9K57_04200 PF05166 YcgL domain H9K57_04205 PF13406 Transglycosylase SLT domain H9K57_04210 PF03466 LysR substrate binding domain H9K57_04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_04215 PF01773 Na+ dependent nucleoside transporter N-terminus H9K57_04215 PF07670 Nucleoside recognition H9K57_04215 PF07662 Na+ dependent nucleoside transporter C-terminus H9K57_04220 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H9K57_04220 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H9K57_04235 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K57_04235 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K57_04245 PF07977 FabA-like domain H9K57_04250 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K57_04250 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K57_04275 PF00221 Aromatic amino acid lyase H9K57_04280 PF00535 Glycosyl transferase family 2 H9K57_04285 PF07977 FabA-like domain H9K57_04300 PF00550 Phosphopantetheine attachment site H9K57_04305 PF00550 Phosphopantetheine attachment site H9K57_04330 PF04820 Tryptophan halogenase H9K57_04340 PF00571 CBS domain H9K57_04340 PF03471 Transporter associated domain H9K57_04340 PF01595 Cyclin M transmembrane N-terminal domain H9K57_04345 PF00270 DEAD/DEAH box helicase H9K57_04345 PF00271 Helicase conserved C-terminal domain H9K57_04350 PF02254 TrkA-N domain H9K57_04350 PF02080 TrkA-C domain H9K57_04355 PF02386 Cation transport protein H9K57_04370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H9K57_04375 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K57_04380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K57_04385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K57_04395 PF02954 Bacterial regulatory protein, Fis family H9K57_04395 PF00072 Response regulator receiver domain H9K57_04395 PF00158 Sigma-54 interaction domain H9K57_04400 PF00512 His Kinase A (phospho-acceptor) domain H9K57_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_04400 PF02743 Cache domain H9K57_04410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_04410 PF05698 Bacterial trigger factor protein (TF) C-terminus H9K57_04410 PF05697 Bacterial trigger factor protein (TF) H9K57_04415 PF00574 Clp protease H9K57_04420 PF10431 C-terminal, D2-small domain, of ClpB protein H9K57_04420 PF07724 AAA domain (Cdc48 subfamily) H9K57_04420 PF06689 ClpX C4-type zinc finger H9K57_04425 PF02190 ATP-dependent protease La (LON) substrate-binding domain H9K57_04425 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K57_04425 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_04430 PF00216 Bacterial DNA-binding protein H9K57_04435 PF13145 PPIC-type PPIASE domain H9K57_04455 PF13286 Phosphohydrolase-associated domain H9K57_04455 PF01966 HD domain H9K57_04465 PF00155 Aminotransferase class I and II H9K57_04470 PF00425 chorismate binding enzyme H9K57_04475 PF16582 Middle domain of thiamine pyrophosphate H9K57_04475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K57_04475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K57_04480 PF12697 Alpha/beta hydrolase family H9K57_04485 PF00378 Enoyl-CoA hydratase/isomerase H9K57_04490 PF13378 Enolase C-terminal domain-like H9K57_04495 PF00501 AMP-binding enzyme H9K57_04495 PF13193 AMP-binding enzyme C-terminal domain H9K57_04505 PF03601 Conserved hypothetical protein 698 H9K57_04510 PF07690 Major Facilitator Superfamily H9K57_04545 PF13533 Biotin-lipoyl like H9K57_04550 PF00873 AcrB/AcrD/AcrF family H9K57_04570 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_04575 PF01037 Lrp/AsnC ligand binding domain H9K57_04575 PF13404 AsnC-type helix-turn-helix domain H9K57_04590 PF09619 Type III secretion system lipoprotein chaperone (YscW) H9K57_04595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K57_04605 PF00990 Diguanylate cyclase, GGDEF domain H9K57_04615 PF00588 SpoU rRNA Methylase family H9K57_04615 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K57_04620 PF11953 Domain of unknown function (DUF3470) H9K57_04620 PF00037 4Fe-4S binding domain H9K57_04630 PF00571 CBS domain H9K57_04630 PF00478 IMP dehydrogenase / GMP reductase domain H9K57_04635 PF00403 Heavy-metal-associated domain H9K57_04640 PF01048 Phosphorylase superfamily H9K57_04650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_04650 PF00672 HAMP domain H9K57_04655 PF01230 HIT domain H9K57_04670 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K57_04670 PF13036 Peptidoglycan-synthase activator LpoB H9K57_04680 PF05728 Uncharacterised protein family (UPF0227) H9K57_04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_04700 PF02559 CarD-like/TRCF domain H9K57_04700 PF00270 DEAD/DEAH box helicase H9K57_04700 PF03461 TRCF domain H9K57_04700 PF00271 Helicase conserved C-terminal domain H9K57_04700 PF17757 UvrB interaction domain H9K57_04710 PF12704 MacB-like periplasmic core domain H9K57_04710 PF02687 FtsX-like permease family H9K57_04715 PF00005 ABC transporter H9K57_04720 PF12704 MacB-like periplasmic core domain H9K57_04720 PF02687 FtsX-like permease family H9K57_04730 PF00753 Metallo-beta-lactamase superfamily H9K57_04730 PF13567 Domain of unknown function (DUF4131) H9K57_04730 PF03772 Competence protein H9K57_04735 PF00005 ABC transporter H9K57_04735 PF00664 ABC transporter transmembrane region H9K57_04740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H9K57_04745 PF03966 Trm112p-like protein H9K57_04750 PF02348 Cytidylyltransferase H9K57_04755 PF04293 SpoVR like protein H9K57_04760 PF04285 Protein of unknown function (DUF444) H9K57_04765 PF08298 PrkA AAA domain H9K57_04765 PF06798 PrkA serine protein kinase C-terminal domain H9K57_04770 PF03887 YfbU domain H9K57_04780 PF04055 Radical SAM superfamily H9K57_04790 PF01228 Glycine radical H9K57_04790 PF02901 Pyruvate formate lyase-like H9K57_04805 PF00005 ABC transporter H9K57_04810 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_04815 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_04820 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_04830 PF03372 Endonuclease/Exonuclease/phosphatase family H9K57_04835 PF10689 Protein of unknown function (DUF2496) H9K57_04840 PF07445 Primosomal replication protein priC H9K57_04845 PF01925 Sulfite exporter TauE/SafE H9K57_04850 PF06733 DEAD_2 H9K57_04850 PF13307 Helicase C-terminal domain H9K57_04860 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K57_04865 PF00849 RNA pseudouridylate synthase H9K57_04870 PF03971 Monomeric isocitrate dehydrogenase H9K57_04875 PF00313 'Cold-shock' DNA-binding domain H9K57_04880 PF02617 ATP-dependent Clp protease adaptor protein ClpS H9K57_04885 PF17871 AAA lid domain H9K57_04885 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_04885 PF07724 AAA domain (Cdc48 subfamily) H9K57_04885 PF02861 Clp amino terminal domain, pathogenicity island component H9K57_04885 PF10431 C-terminal, D2-small domain, of ClpB protein H9K57_04895 PF01176 Translation initiation factor 1A / IF-1 H9K57_04900 PF04376 Arginine-tRNA-protein transferase, N terminus H9K57_04900 PF04377 Arginine-tRNA-protein transferase, C terminus H9K57_04905 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H9K57_04915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K57_04920 PF10692 Protein of unknown function (DUF2498) H9K57_04925 PF01751 Toprim domain H9K57_04925 PF01131 DNA topoisomerase H9K57_04925 PF01396 Topoisomerase DNA binding C4 zinc finger H9K57_04925 PF08272 Topoisomerase I zinc-ribbon-like H9K57_04930 PF00483 Nucleotidyl transferase H9K57_04935 PF00534 Glycosyl transferases group 1 H9K57_04935 PF08323 Starch synthase catalytic domain H9K57_04955 PF04994 TfoX C-terminal domain H9K57_04955 PF04993 TfoX N-terminal domain H9K57_04960 PF00356 Bacterial regulatory proteins, lacI family H9K57_04965 PF02613 Nitrate reductase delta subunit H9K57_04970 PF00072 Response regulator receiver domain H9K57_04970 PF00486 Transcriptional regulatory protein, C terminal H9K57_04975 PF02698 DUF218 domain H9K57_04980 PF13847 Methyltransferase domain H9K57_04985 PF17193 MukF C-terminal domain H9K57_04985 PF03882 MukF winged-helix domain H9K57_04985 PF17192 MukF middle domain H9K57_04990 PF04288 MukE-like family H9K57_04995 PF04310 MukB N-terminal H9K57_04995 PF16330 MukB hinge domain H9K57_05005 PF08443 RimK-like ATP-grasp domain H9K57_05005 PF18030 RimK PreATP-grasp domain H9K57_05015 PF08443 RimK-like ATP-grasp domain H9K57_05015 PF18030 RimK PreATP-grasp domain H9K57_05020 PF08003 Protein of unknown function (DUF1698) H9K57_05025 PF13649 Methyltransferase domain H9K57_05030 PF01904 Protein of unknown function DUF72 H9K57_05035 PF02938 GAD domain H9K57_05035 PF01336 OB-fold nucleic acid binding domain H9K57_05035 PF00152 tRNA synthetases class II (D, K and N) H9K57_05040 PF02075 Crossover junction endodeoxyribonuclease RuvC H9K57_05045 PF02203 Tar ligand binding domain homologue H9K57_05045 PF00672 HAMP domain H9K57_05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_05050 PF01330 RuvA N terminal domain H9K57_05050 PF07499 RuvA, C-terminal domain H9K57_05055 PF05496 Holliday junction DNA helicase RuvB P-loop domain H9K57_05055 PF05491 RuvB C-terminal winged helix domain H9K57_05055 PF17864 RuvB AAA lid domain H9K57_05060 PF01654 Cytochrome bd terminal oxidase subunit I H9K57_05065 PF02322 Cytochrome bd terminal oxidase subunit II H9K57_05070 PF08173 Membrane bound YbgT-like protein H9K57_05080 PF03061 Thioesterase superfamily H9K57_05085 PF01618 MotA/TolQ/ExbB proton channel family H9K57_05090 PF02472 Biopolymer transport protein ExbD/TolR H9K57_05100 PF04052 TolB amino-terminal domain H9K57_05100 PF07676 WD40-like Beta Propeller Repeat H9K57_05105 PF00691 OmpA family H9K57_05110 PF16331 TolA binding protein trimerisation H9K57_05110 PF13174 Tetratricopeptide repeat H9K57_05115 PF02445 Quinolinate synthetase A protein H9K57_05125 PF03994 Domain of Unknown Function (DUF350) H9K57_05135 PF03738 Glutathionylspermidine synthase preATP-grasp H9K57_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_05145 PF00512 His Kinase A (phospho-acceptor) domain H9K57_05145 PF00072 Response regulator receiver domain H9K57_05145 PF09308 LuxQ, periplasmic H9K57_05150 PF06610 L-alanine exporter H9K57_05175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_05175 PF00672 HAMP domain H9K57_05175 PF12729 Four helix bundle sensory module for signal transduction H9K57_05180 PF00529 HlyD membrane-fusion protein of T1SS H9K57_05180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_05185 PF00873 AcrB/AcrD/AcrF family H9K57_05200 PF00579 tRNA synthetases class I (W and Y) H9K57_05210 PF03372 Endonuclease/Exonuclease/phosphatase family H9K57_05215 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H9K57_05225 PF03466 LysR substrate binding domain H9K57_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_05235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K57_05235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K57_05240 PF01037 Lrp/AsnC ligand binding domain H9K57_05245 PF01580 FtsK/SpoIIIE family H9K57_05245 PF09397 Ftsk gamma domain H9K57_05245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H9K57_05245 PF17854 FtsK alpha domain H9K57_05250 PF03548 Outer membrane lipoprotein carrier protein LolA H9K57_05255 PF16193 AAA C-terminal domain H9K57_05255 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_05255 PF12002 MgsA AAA+ ATPase C terminal H9K57_05260 PF02403 Seryl-tRNA synthetase N-terminal domain H9K57_05260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K57_05265 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K57_05270 PF00202 Aminotransferase class-III H9K57_05275 PF06968 Biotin and Thiamin Synthesis associated domain H9K57_05275 PF04055 Radical SAM superfamily H9K57_05280 PF00155 Aminotransferase class I and II H9K57_05285 PF08241 Methyltransferase domain H9K57_05300 PF01435 Peptidase family M48 H9K57_05310 PF00106 short chain dehydrogenase H9K57_05345 PF00206 Lyase H9K57_05345 PF08328 Adenylosuccinate lyase C-terminal H9K57_05350 PF04356 Protein of unknown function (DUF489) H9K57_05365 PF00294 pfkB family carbohydrate kinase H9K57_05370 PF00816 H-NS histone family H9K57_05375 PF03553 Na+/H+ antiporter family H9K57_05385 PF02954 Bacterial regulatory protein, Fis family H9K57_05385 PF00072 Response regulator receiver domain H9K57_05385 PF00158 Sigma-54 interaction domain H9K57_05390 PF08029 HisG, C-terminal domain H9K57_05390 PF01634 ATP phosphoribosyltransferase H9K57_05395 PF00815 Histidinol dehydrogenase H9K57_05400 PF00155 Aminotransferase class I and II H9K57_05405 PF00475 Imidazoleglycerol-phosphate dehydratase H9K57_05405 PF08645 Polynucleotide kinase 3 phosphatase H9K57_05410 PF00117 Glutamine amidotransferase class-I H9K57_05415 PF00977 Histidine biosynthesis protein H9K57_05420 PF00977 Histidine biosynthesis protein H9K57_05425 PF01502 Phosphoribosyl-AMP cyclohydrolase H9K57_05425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H9K57_05430 PF02810 SEC-C motif H9K57_05435 PF00563 EAL domain H9K57_05435 PF08668 HDOD domain H9K57_05440 PF00149 Calcineurin-like phosphoesterase H9K57_05445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K57_05450 PF09190 DALR domain H9K57_05450 PF01406 tRNA synthetases class I (C) catalytic domain H9K57_05455 PF00265 Thymidine kinase H9K57_05460 PF02698 DUF218 domain H9K57_05485 PF01226 Formate/nitrite transporter H9K57_05495 PF03649 Uncharacterised protein family (UPF0014) H9K57_05500 PF06796 Periplasmic nitrate reductase protein NapE H9K57_05505 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K57_05510 PF00384 Molybdopterin oxidoreductase H9K57_05510 PF01568 Molydopterin dinucleotide binding domain H9K57_05510 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K57_05525 PF02833 DHHA2 domain H9K57_05525 PF01368 DHH family H9K57_05535 PF00005 ABC transporter H9K57_05540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_05540 PF00005 ABC transporter H9K57_05545 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_05545 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_05550 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_05555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_05560 PF02954 Bacterial regulatory protein, Fis family H9K57_05560 PF00158 Sigma-54 interaction domain H9K57_05565 PF04012 PspA/IM30 family H9K57_05570 PF06667 Phage shock protein B H9K57_05575 PF04024 PspC domain H9K57_05580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_05590 PF00873 AcrB/AcrD/AcrF family H9K57_05595 PF03352 Methyladenine glycosylase H9K57_05600 PF03280 Proteobacterial lipase chaperone protein H9K57_05605 PF00561 alpha/beta hydrolase fold H9K57_05610 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K57_05615 PF13091 PLD-like domain H9K57_05615 PF13396 Phospholipase_D-nuclease N-terminal H9K57_05620 PF00209 Sodium:neurotransmitter symporter family H9K57_05625 PF00672 HAMP domain H9K57_05625 PF12729 Four helix bundle sensory module for signal transduction H9K57_05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_05630 PF00849 RNA pseudouridylate synthase H9K57_05640 PF00970 Oxidoreductase FAD-binding domain H9K57_05640 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_05640 PF00175 Oxidoreductase NAD-binding domain H9K57_05645 PF03063 Prismane/CO dehydrogenase family H9K57_05650 PF00158 Sigma-54 interaction domain H9K57_05650 PF01590 GAF domain H9K57_05660 PF01066 CDP-alcohol phosphatidyltransferase H9K57_05665 PF00005 ABC transporter H9K57_05670 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_05675 PF13416 Bacterial extracellular solute-binding protein H9K57_05680 PF09335 SNARE associated Golgi protein H9K57_05690 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_05690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K57_05700 PF00512 His Kinase A (phospho-acceptor) domain H9K57_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_05705 PF00196 Bacterial regulatory proteins, luxR family H9K57_05705 PF00072 Response regulator receiver domain H9K57_05715 PF06945 Protein of unknown function (DUF1289) H9K57_05725 PF02872 5'-nucleotidase, C-terminal domain H9K57_05725 PF00149 Calcineurin-like phosphoesterase H9K57_05740 PF01386 Ribosomal L25p family H9K57_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_05750 PF00072 Response regulator receiver domain H9K57_05750 PF00486 Transcriptional regulatory protein, C terminal H9K57_05760 PF04851 Type III restriction enzyme, res subunit H9K57_05760 PF00271 Helicase conserved C-terminal domain H9K57_05765 PF00849 RNA pseudouridylate synthase H9K57_05765 PF01479 S4 domain H9K57_05770 PF07690 Major Facilitator Superfamily H9K57_05780 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB H9K57_05785 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) H9K57_05800 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K57_05805 PF11066 Protein of unknown function (DUF2867) H9K57_05805 PF13460 NAD(P)H-binding H9K57_05810 PF01554 MatE H9K57_05815 PF00005 ABC transporter H9K57_05830 PF06965 Na+/H+ antiporter 1 H9K57_05835 PF00440 Bacterial regulatory proteins, tetR family H9K57_05835 PF16295 Tetracyclin repressor-like, C-terminal domain H9K57_05840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_05840 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_05840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_05840 PF09317 Domain of unknown function (DUF1974) H9K57_05845 PF07055 Enoyl reductase FAD binding domain H9K57_05845 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K57_05845 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K57_05850 PF06826 Predicted Permease Membrane Region H9K57_05850 PF02080 TrkA-C domain H9K57_05855 PF00462 Glutaredoxin H9K57_05860 PF00465 Iron-containing alcohol dehydrogenase H9K57_05865 PF01418 Helix-turn-helix domain, rpiR family H9K57_05865 PF01380 SIS domain H9K57_05870 PF00282 Pyridoxal-dependent decarboxylase conserved domain H9K57_05880 PF03956 Lysine exporter LysO H9K57_05890 PF04994 TfoX C-terminal domain H9K57_05890 PF04993 TfoX N-terminal domain H9K57_05905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_05905 PF00512 His Kinase A (phospho-acceptor) domain H9K57_05905 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_05915 PF00266 Aminotransferase class-V H9K57_05920 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_05925 PF00005 ABC transporter H9K57_05925 PF00664 ABC transporter transmembrane region H9K57_05930 PF00664 ABC transporter transmembrane region H9K57_05930 PF00005 ABC transporter H9K57_05935 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_05945 PF00266 Aminotransferase class-V H9K57_05955 PF00990 Diguanylate cyclase, GGDEF domain H9K57_05955 PF00072 Response regulator receiver domain H9K57_05960 PF00939 Sodium:sulfate symporter transmembrane region H9K57_05965 PF02698 DUF218 domain H9K57_05970 PF03949 Malic enzyme, NAD binding domain H9K57_05970 PF00390 Malic enzyme, N-terminal domain H9K57_05975 PF08482 ATP-dependent helicase C-terminal H9K57_05975 PF00271 Helicase conserved C-terminal domain H9K57_05975 PF00270 DEAD/DEAH box helicase H9K57_05975 PF04408 Helicase associated domain (HA2) H9K57_05980 PF02253 Phospholipase A1 H9K57_05990 PF09423 PhoD-like phosphatase H9K57_05990 PF16655 PhoD-like phosphatase, N-terminal domain H9K57_05995 PF01259 SAICAR synthetase H9K57_06015 PF00691 OmpA family H9K57_06015 PF05736 OprF membrane domain H9K57_06030 PF02913 FAD linked oxidases, C-terminal domain H9K57_06030 PF01565 FAD binding domain H9K57_06030 PF13183 4Fe-4S dicluster domain H9K57_06035 PF04191 Phospholipid methyltransferase H9K57_06045 PF00221 Aromatic amino acid lyase H9K57_06050 PF17391 Urocanase N-terminal domain H9K57_06050 PF01175 Urocanase Rossmann-like domain H9K57_06050 PF17392 Urocanase C-terminal domain H9K57_06055 PF00491 Arginase family H9K57_06060 PF01979 Amidohydrolase family H9K57_06065 PF00392 Bacterial regulatory proteins, gntR family H9K57_06065 PF07702 UTRA domain H9K57_06080 PF03129 Anticodon binding domain H9K57_06080 PF02824 TGS domain H9K57_06080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K57_06080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K57_06085 PF00707 Translation initiation factor IF-3, C-terminal domain H9K57_06085 PF05198 Translation initiation factor IF-3, N-terminal domain H9K57_06090 PF01632 Ribosomal protein L35 H9K57_06095 PF00453 Ribosomal protein L20 H9K57_06100 PF01906 Putative heavy-metal-binding H9K57_06130 PF00990 Diguanylate cyclase, GGDEF domain H9K57_06130 PF17158 Membrane-associated sensor, integral membrane domain H9K57_06135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H9K57_06135 PF01409 tRNA synthetases class II core domain (F) H9K57_06140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H9K57_06140 PF01588 Putative tRNA binding domain H9K57_06140 PF03484 tRNA synthetase B5 domain H9K57_06140 PF03483 B3/4 domain H9K57_06140 PF03147 Ferredoxin-fold anticodon binding domain H9K57_06150 PF00216 Bacterial DNA-binding protein H9K57_06160 PF05724 Thiopurine S-methyltransferase (TPMT) H9K57_06165 PF02222 ATP-grasp domain H9K57_06170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K57_06170 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region H9K57_06175 PF04172 LrgB-like family H9K57_06180 PF03788 LrgA family H9K57_06185 PF08411 Exonuclease C-terminal H9K57_06185 PF00929 Exonuclease H9K57_06190 PF00375 Sodium:dicarboxylate symporter family H9K57_06195 PF13460 NAD(P)H-binding H9K57_06200 PF02277 Phosphoribosyltransferase H9K57_06205 PF02654 Cobalamin-5-phosphate synthase H9K57_06210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H9K57_06225 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9K57_06230 PF01032 FecCD transport family H9K57_06235 PF00005 ABC transporter H9K57_06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_06255 PF03466 LysR substrate binding domain H9K57_06265 PF01863 Protein of unknown function DUF45 H9K57_06270 PF05971 RNA methyltransferase H9K57_06290 PF00392 Bacterial regulatory proteins, gntR family H9K57_06295 PF00171 Aldehyde dehydrogenase family H9K57_06300 PF05544 Proline racemase H9K57_06315 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9K57_06320 PF00701 Dihydrodipicolinate synthetase family H9K57_06325 PF00005 ABC transporter H9K57_06325 PF08402 TOBE domain H9K57_06330 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_06335 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_06345 PF01752 Collagenase H9K57_06345 PF08453 Peptidase family M9 N-terminal H9K57_06355 PF00005 ABC transporter H9K57_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_06360 PF00005 ABC transporter H9K57_06360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_06365 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_06365 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_06370 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_06375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_06380 PF07687 Peptidase dimerisation domain H9K57_06380 PF01546 Peptidase family M20/M25/M40 H9K57_06385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_06390 PF04209 homogentisate 1,2-dioxygenase H9K57_06400 PF02798 Glutathione S-transferase, N-terminal domain H9K57_06400 PF14497 Glutathione S-transferase, C-terminal domain H9K57_06505 PF00313 'Cold-shock' DNA-binding domain H9K57_06510 PF00575 S1 RNA binding domain H9K57_06510 PF00773 RNB domain H9K57_06510 PF08206 Ribonuclease B OB domain H9K57_06510 PF08461 Ribonuclease R winged-helix domain H9K57_06510 PF17876 Cold shock domain H9K57_06540 PF07411 Domain of unknown function (DUF1508) H9K57_06560 PF04466 Phage terminase large subunit H9K57_06560 PF17288 Terminase RNAseH like domain H9K57_06735 PF13533 Biotin-lipoyl like H9K57_06750 PF08543 Phosphomethylpyrimidine kinase H9K57_06755 PF03466 LysR substrate binding domain H9K57_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_06775 PF00300 Histidine phosphatase superfamily (branch 1) H9K57_06790 PF00939 Sodium:sulfate symporter transmembrane region H9K57_06795 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_06795 PF00512 His Kinase A (phospho-acceptor) domain H9K57_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_06800 PF02954 Bacterial regulatory protein, Fis family H9K57_06800 PF00072 Response regulator receiver domain H9K57_06800 PF00158 Sigma-54 interaction domain H9K57_06805 PF03707 Bacterial signalling protein N terminal repeat H9K57_06805 PF00563 EAL domain H9K57_06805 PF00990 Diguanylate cyclase, GGDEF domain H9K57_06810 PF11871 Domain of unknown function (DUF3391) H9K57_06810 PF01966 HD domain H9K57_06815 PF01810 LysE type translocator H9K57_06820 PF11230 Protein of unknown function (DUF3029) H9K57_06825 PF04055 Radical SAM superfamily H9K57_06835 PF03741 Integral membrane protein TerC family H9K57_06840 PF01476 LysM domain H9K57_06840 PF08525 Opacity-associated protein A N-terminal motif H9K57_06840 PF01551 Peptidase family M23 H9K57_06865 PF02954 Bacterial regulatory protein, Fis family H9K57_06865 PF00158 Sigma-54 interaction domain H9K57_06870 PF07724 AAA domain (Cdc48 subfamily) H9K57_06870 PF17871 AAA lid domain H9K57_06870 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_06870 PF10431 C-terminal, D2-small domain, of ClpB protein H9K57_06875 PF05638 Type VI secretion system effector, Hcp H9K57_06880 PF04717 Type VI secretion system, phage-baseplate injector H9K57_06905 PF00069 Protein kinase domain H9K57_06920 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K57_06930 PF05947 Type VI secretion system, TssF H9K57_06940 PF01037 Lrp/AsnC ligand binding domain H9K57_06970 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9K57_07025 PF01966 HD domain H9K57_07030 PF00465 Iron-containing alcohol dehydrogenase H9K57_07035 PF03222 Tryptophan/tyrosine permease family H9K57_07055 PF00664 ABC transporter transmembrane region H9K57_07055 PF00005 ABC transporter H9K57_07060 PF00664 ABC transporter transmembrane region H9K57_07060 PF00005 ABC transporter H9K57_07085 PF00012 Hsp70 protein H9K57_07090 PF00012 Hsp70 protein H9K57_07100 PF00990 Diguanylate cyclase, GGDEF domain H9K57_07100 PF17158 Membrane-associated sensor, integral membrane domain H9K57_07130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_07130 PF01568 Molydopterin dinucleotide binding domain H9K57_07130 PF00384 Molybdopterin oxidoreductase H9K57_07135 PF13247 4Fe-4S dicluster domain H9K57_07135 PF12800 4Fe-4S binding domain H9K57_07140 PF04976 DMSO reductase anchor subunit (DmsC) H9K57_07145 PF02613 Nitrate reductase delta subunit H9K57_07155 PF02525 Flavodoxin-like fold H9K57_07160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9K57_07160 PF00271 Helicase conserved C-terminal domain H9K57_07160 PF00270 DEAD/DEAH box helicase H9K57_07160 PF11898 Domain of unknown function (DUF3418) H9K57_07160 PF04408 Helicase associated domain (HA2) H9K57_07175 PF02028 BCCT, betaine/carnitine/choline family transporter H9K57_07185 PF02397 Bacterial sugar transferase H9K57_07190 PF00535 Glycosyl transferase family 2 H9K57_07195 PF00534 Glycosyl transferases group 1 H9K57_07195 PF13439 Glycosyltransferase Family 4 H9K57_07225 PF00534 Glycosyl transferases group 1 H9K57_07225 PF13439 Glycosyltransferase Family 4 H9K57_07230 PF13439 Glycosyltransferase Family 4 H9K57_07230 PF00534 Glycosyl transferases group 1 H9K57_07235 PF00072 Response regulator receiver domain H9K57_07235 PF00158 Sigma-54 interaction domain H9K57_07235 PF02954 Bacterial regulatory protein, Fis family H9K57_07250 PF02563 Polysaccharide biosynthesis/export protein H9K57_07250 PF10531 SLBB domain H9K57_07260 PF01740 STAS domain H9K57_07265 PF01068 ATP dependent DNA ligase domain H9K57_07265 PF14743 DNA ligase OB-like domain H9K57_07275 PF01554 MatE H9K57_07280 PF00677 Lumazine binding domain H9K57_07290 PF03881 Fructosamine kinase H9K57_07295 PF01339 CheB methylesterase H9K57_07295 PF00072 Response regulator receiver domain H9K57_07300 PF05230 MASE2 domain H9K57_07300 PF00990 Diguanylate cyclase, GGDEF domain H9K57_07310 PF00877 NlpC/P60 family H9K57_07315 PF17202 Single cache domain 3 H9K57_07315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_07315 PF00672 HAMP domain H9K57_07345 PF03942 DTW domain H9K57_07350 PF00480 ROK family H9K57_07360 PF03453 MoeA N-terminal region (domain I and II) H9K57_07360 PF03454 MoeA C-terminal region (domain IV) H9K57_07360 PF00994 Probable molybdopterin binding domain H9K57_07365 PF12804 MobA-like NTP transferase domain H9K57_07370 PF00005 ABC transporter H9K57_07370 PF08402 TOBE domain H9K57_07375 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_07380 PF12849 PBP superfamily domain H9K57_07385 PF00158 Sigma-54 interaction domain H9K57_07385 PF00072 Response regulator receiver domain H9K57_07385 PF02954 Bacterial regulatory protein, Fis family H9K57_07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_07390 PF00512 His Kinase A (phospho-acceptor) domain H9K57_07395 PF00005 ABC transporter H9K57_07395 PF12848 ABC transporter H9K57_07400 PF02634 FdhD/NarQ family H9K57_07420 PF02613 Nitrate reductase delta subunit H9K57_07430 PF01568 Molydopterin dinucleotide binding domain H9K57_07430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_07430 PF00384 Molybdopterin oxidoreductase H9K57_07435 PF13247 4Fe-4S dicluster domain H9K57_07450 PF03527 RHS protein H9K57_07450 PF05593 RHS Repeat H9K57_07490 PF00909 Ammonium Transporter Family H9K57_07500 PF02146 Sir2 family H9K57_07505 PF13416 Bacterial extracellular solute-binding protein H9K57_07510 PF13416 Bacterial extracellular solute-binding protein H9K57_07515 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_07520 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_07525 PF08402 TOBE domain H9K57_07525 PF00005 ABC transporter H9K57_07545 PF01171 PP-loop family H9K57_07550 PF00582 Universal stress protein family H9K57_07555 PF00027 Cyclic nucleotide-binding domain H9K57_07555 PF13545 Crp-like helix-turn-helix domain H9K57_07570 PF00403 Heavy-metal-associated domain H9K57_07580 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H9K57_07580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K57_07595 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K57_07610 PF00072 Response regulator receiver domain H9K57_07610 PF09308 LuxQ, periplasmic H9K57_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_07610 PF00512 His Kinase A (phospho-acceptor) domain H9K57_07635 PF05707 Zonular occludens toxin (Zot) H9K57_07665 PF17414 MatP C-terminal ribbon-helix-helix domain H9K57_07665 PF06303 MatP N-terminal domain H9K57_07670 PF13654 AAA domain H9K57_07670 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K57_07675 PF07977 FabA-like domain H9K57_07680 PF04957 Ribosome modulation factor H9K57_07690 PF12848 ABC transporter H9K57_07690 PF00005 ABC transporter H9K57_07690 PF16326 ABC transporter C-terminal domain H9K57_07700 PF02926 THUMP domain H9K57_07700 PF10672 S-adenosylmethionine-dependent methyltransferase H9K57_07700 PF01170 Putative RNA methylase family UPF0020 H9K57_07705 PF07126 Cell-division protein ZapC H9K57_07710 PF01180 Dihydroorotate dehydrogenase H9K57_07715 PF05088 Bacterial NAD-glutamate dehydrogenase H9K57_07725 PF01433 Peptidase family M1 domain H9K57_07725 PF11940 Domain of unknown function (DUF3458) Ig-like fold H9K57_07725 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H9K57_07735 PF11818 C-terminal domain of tail specific protease (DUF3340) H9K57_07735 PF00595 PDZ domain H9K57_07735 PF03572 Peptidase family S41 H9K57_07735 PF17804 Tail specific protease N-terminal domain H9K57_07740 PF04352 ProQ/FINO family H9K57_07740 PF17516 ProQ C-terminal domain H9K57_07745 PF13185 GAF domain H9K57_07750 PF00664 ABC transporter transmembrane region H9K57_07750 PF00005 ABC transporter H9K57_07755 PF04403 Paraquat-inducible protein A H9K57_07760 PF02470 MlaD protein H9K57_07765 PF01189 16S rRNA methyltransferase RsmB/F H9K57_07765 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H9K57_07765 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF H9K57_07785 PF00793 DAHP synthetase I family H9K57_07790 PF04461 Protein of unknown function (DUF520) H9K57_07795 PF10414 Sirohaem synthase dimerisation region H9K57_07795 PF14824 Sirohaem biosynthesis protein central H9K57_07795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K57_07800 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_07805 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_07810 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_07815 PF00005 ABC transporter H9K57_07820 PF01027 Inhibitor of apoptosis-promoting Bax1 H9K57_07830 PF04358 DsrC like protein H9K57_07835 PF00708 Acylphosphatase H9K57_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_07840 PF00672 HAMP domain H9K57_07840 PF02743 Cache domain H9K57_07845 PF17785 PUA-like domain H9K57_07845 PF10672 S-adenosylmethionine-dependent methyltransferase H9K57_07880 PF05736 OprF membrane domain H9K57_07880 PF00691 OmpA family H9K57_07895 PF06508 Queuosine biosynthesis protein QueC H9K57_07915 PF00089 Trypsin H9K57_07920 PF00583 Acetyltransferase (GNAT) family H9K57_07930 PF04303 PrpF protein H9K57_07940 PF00285 Citrate synthase, C-terminal domain H9K57_07995 PF07720 Tetratricopeptide repeat H9K57_08005 PF07216 LcrG protein H9K57_08010 PF09621 Type III secretion system regulator (LcrR) H9K57_08065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K57_08075 PF01313 Bacterial export proteins, family 3 H9K57_08130 PF02661 Fic/DOC family H9K57_08140 PF02108 Flagellar assembly protein FliH H9K57_08155 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI H9K57_08165 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) H9K57_08170 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF H9K57_08185 PF03958 Bacterial type II/III secretion system short domain H9K57_08185 PF00263 Bacterial type II and III secretion system protein H9K57_08200 PF12833 Helix-turn-helix domain H9K57_08220 PF00171 Aldehyde dehydrogenase family H9K57_08460 PF04466 Phage terminase large subunit H9K57_08460 PF17288 Terminase RNAseH like domain H9K57_08475 PF01380 SIS domain H9K57_08500 PF02195 ParB-like nuclease domain H9K57_08590 PF01381 Helix-turn-helix H9K57_08590 PF00717 Peptidase S24-like H9K57_08780 PF00512 His Kinase A (phospho-acceptor) domain H9K57_08780 PF08521 Two-component sensor kinase N-terminal H9K57_08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_08810 PF01235 Sodium:alanine symporter family H9K57_08845 PF04204 Homoserine O-succinyltransferase H9K57_08895 PF01928 CYTH domain H9K57_08905 PF04237 YjbR H9K57_08910 PF01047 MarR family H9K57_08950 PF00171 Aldehyde dehydrogenase family H9K57_09015 PF01810 LysE type translocator H9K57_09265 PF00293 NUDIX domain H9K57_09330 PF00857 Isochorismatase family H9K57_09625 PF00583 Acetyltransferase (GNAT) family H9K57_09670 PF00293 NUDIX domain H9K57_09690 PF00293 NUDIX domain H9K57_09770 PF13495 Phage integrase, N-terminal SAM-like domain H9K57_09770 PF00589 Phage integrase family H9K57_09785 PF13302 Acetyltransferase (GNAT) domain H9K57_09790 PF18024 Helix-turn-helix domain H9K57_09790 PF00158 Sigma-54 interaction domain H9K57_09795 PF05128 Domain of unknown function (DUF697) H9K57_09800 PF04317 YcjX-like family, DUF463 H9K57_09815 PF00425 chorismate binding enzyme H9K57_09815 PF04715 Anthranilate synthase component I, N terminal region H9K57_09820 PF00072 Response regulator receiver domain H9K57_09820 PF09308 LuxQ, periplasmic H9K57_09820 PF00512 His Kinase A (phospho-acceptor) domain H9K57_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_09830 PF00293 NUDIX domain H9K57_09835 PF03222 Tryptophan/tyrosine permease family H9K57_09840 PF03313 Serine dehydratase alpha chain H9K57_09840 PF03315 Serine dehydratase beta chain H9K57_09845 PF04940 Sensors of blue-light using FAD H9K57_09845 PF00563 EAL domain H9K57_09855 PF01242 6-pyruvoyl tetrahydropterin synthase H9K57_09860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_09860 PF00672 HAMP domain H9K57_09860 PF12729 Four helix bundle sensory module for signal transduction H9K57_09865 PF00152 tRNA synthetases class II (D, K and N) H9K57_09865 PF01336 OB-fold nucleic acid binding domain H9K57_09875 PF00155 Aminotransferase class I and II H9K57_09875 PF00392 Bacterial regulatory proteins, gntR family H9K57_09890 PF00155 Aminotransferase class I and II H9K57_09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_09910 PF00672 HAMP domain H9K57_09915 PF02028 BCCT, betaine/carnitine/choline family transporter H9K57_09920 PF01047 MarR family H9K57_09925 PF00196 Bacterial regulatory proteins, luxR family H9K57_09925 PF00072 Response regulator receiver domain H9K57_09930 PF07730 Histidine kinase H9K57_09930 PF17200 Single Cache domain 2 H9K57_09935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K57_09945 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K57_09960 PF00753 Metallo-beta-lactamase superfamily H9K57_09965 PF05951 Bacterial protein of unknown function (DUF882) H9K57_09970 PF01471 Putative peptidoglycan binding domain H9K57_09970 PF03734 L,D-transpeptidase catalytic domain H9K57_09995 PF00925 GTP cyclohydrolase II H9K57_10005 PF03918 Cytochrome C biogenesis protein H9K57_10010 PF08534 Redoxin H9K57_10015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K57_10015 PF01578 Cytochrome C assembly protein H9K57_10020 PF03916 Polysulphide reductase, NrfD H9K57_10025 PF13247 4Fe-4S dicluster domain H9K57_10035 PF02335 Cytochrome c552 H9K57_10050 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K57_10050 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K57_10060 PF03477 ATP cone domain H9K57_10060 PF02867 Ribonucleotide reductase, barrel domain H9K57_10060 PF00317 Ribonucleotide reductase, all-alpha domain H9K57_10065 PF00268 Ribonucleotide reductase, small chain H9K57_10075 PF00994 Probable molybdopterin binding domain H9K57_10090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K57_10095 PF16653 Saccharopine dehydrogenase C-terminal domain H9K57_10095 PF03435 Saccharopine dehydrogenase NADP binding domain H9K57_10100 PF00202 Aminotransferase class-III H9K57_10125 PF01066 CDP-alcohol phosphatidyltransferase H9K57_10130 PF02151 UvrB/uvrC motif H9K57_10130 PF08459 UvrC Helix-hairpin-helix N-terminal H9K57_10130 PF01541 GIY-YIG catalytic domain H9K57_10135 PF00072 Response regulator receiver domain H9K57_10135 PF00196 Bacterial regulatory proteins, luxR family H9K57_10140 PF03104 DNA polymerase family B, exonuclease domain H9K57_10140 PF00136 DNA polymerase family B H9K57_10150 PF08207 Elongation factor P (EF-P) KOW-like domain H9K57_10150 PF01132 Elongation factor P (EF-P) OB domain H9K57_10150 PF09285 Elongation factor P, C-terminal H9K57_10155 PF04269 Protein of unknown function, DUF440 H9K57_10160 PF01479 S4 domain H9K57_10160 PF00849 RNA pseudouridylate synthase H9K57_10170 PF01300 Telomere recombination H9K57_10175 PF02811 PHP domain H9K57_10180 PF08056 Tryptophan operon leader peptide H9K57_10185 PF04715 Anthranilate synthase component I, N terminal region H9K57_10185 PF00425 chorismate binding enzyme H9K57_10190 PF00117 Glutamine amidotransferase class-I H9K57_10195 PF02885 Glycosyl transferase family, helical bundle domain H9K57_10195 PF00591 Glycosyl transferase family, a/b domain H9K57_10200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H9K57_10200 PF00218 Indole-3-glycerol phosphate synthase H9K57_10205 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_10210 PF00290 Tryptophan synthase alpha chain H9K57_10215 PF13545 Crp-like helix-turn-helix domain H9K57_10215 PF00027 Cyclic nucleotide-binding domain H9K57_10220 PF13193 AMP-binding enzyme C-terminal domain H9K57_10220 PF00501 AMP-binding enzyme H9K57_10225 PF00375 Sodium:dicarboxylate symporter family H9K57_10230 PF17327 Acyl homoserine lactone synthase H9K57_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_10235 PF00072 Response regulator receiver domain H9K57_10245 PF04279 Intracellular septation protein A H9K57_10250 PF03061 Thioesterase superfamily H9K57_10255 PF03795 YCII-related domain H9K57_10265 PF01717 Cobalamin-independent synthase, Catalytic domain H9K57_10265 PF08267 Cobalamin-independent synthase, N-terminal domain H9K57_10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_10270 PF03466 LysR substrate binding domain H9K57_10285 PF00563 EAL domain H9K57_10285 PF01590 GAF domain H9K57_10285 PF00990 Diguanylate cyclase, GGDEF domain H9K57_10285 PF00360 Phytochrome region H9K57_10290 PF11842 Domain of unknown function (DUF3362) H9K57_10290 PF08497 Radical SAM N-terminal H9K57_10290 PF04055 Radical SAM superfamily H9K57_10295 PF00672 HAMP domain H9K57_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_10300 PF00486 Transcriptional regulatory protein, C terminal H9K57_10300 PF00072 Response regulator receiver domain H9K57_10305 PF00512 His Kinase A (phospho-acceptor) domain H9K57_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_10305 PF00672 HAMP domain H9K57_10325 PF03466 LysR substrate binding domain H9K57_10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_10330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_10330 PF00529 HlyD membrane-fusion protein of T1SS H9K57_10340 PF01717 Cobalamin-independent synthase, Catalytic domain H9K57_10340 PF08267 Cobalamin-independent synthase, N-terminal domain H9K57_10350 PF02311 AraC-like ligand binding domain H9K57_10350 PF12833 Helix-turn-helix domain H9K57_10355 PF00857 Isochorismatase family H9K57_10360 PF12704 MacB-like periplasmic core domain H9K57_10360 PF02687 FtsX-like permease family H9K57_10360 PF00005 ABC transporter H9K57_10365 PF00005 ABC transporter H9K57_10365 PF12704 MacB-like periplasmic core domain H9K57_10365 PF02687 FtsX-like permease family H9K57_10370 PF00005 ABC transporter H9K57_10370 PF02687 FtsX-like permease family H9K57_10370 PF12704 MacB-like periplasmic core domain H9K57_10380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_10400 PF00085 Thioredoxin H9K57_10405 PF11412 Disulphide bond corrector protein DsbC H9K57_10405 PF02683 Cytochrome C biogenesis protein transmembrane region H9K57_10415 PF03466 LysR substrate binding domain H9K57_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_10420 PF00072 Response regulator receiver domain H9K57_10420 PF00196 Bacterial regulatory proteins, luxR family H9K57_10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_10425 PF00512 His Kinase A (phospho-acceptor) domain H9K57_10430 PF13247 4Fe-4S dicluster domain H9K57_10435 PF03916 Polysulphide reductase, NrfD H9K57_10440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_10440 PF01568 Molydopterin dinucleotide binding domain H9K57_10440 PF00384 Molybdopterin oxidoreductase H9K57_10445 PF00034 Cytochrome c H9K57_10450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K57_10455 PF04403 Paraquat-inducible protein A H9K57_10460 PF02470 MlaD protein H9K57_10470 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H9K57_10480 PF00535 Glycosyl transferase family 2 H9K57_10485 PF01370 NAD dependent epimerase/dehydratase family H9K57_10495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_10500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H9K57_10505 PF18073 Rubredoxin metal binding domain H9K57_10510 PF06305 Lipopolysaccharide assembly protein A domain H9K57_10515 PF00216 Bacterial DNA-binding protein H9K57_10520 PF00575 S1 RNA binding domain H9K57_10525 PF02224 Cytidylate kinase H9K57_10530 PF01343 Peptidase family S49 H9K57_10530 PF08496 Peptidase family S49 N-terminal H9K57_10535 PF00106 short chain dehydrogenase H9K57_10550 PF02811 PHP domain H9K57_10550 PF14579 Helix-hairpin-helix motif H9K57_10550 PF01336 OB-fold nucleic acid binding domain H9K57_10550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K57_10550 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K57_10555 PF00072 Response regulator receiver domain H9K57_10555 PF01584 CheW-like domain H9K57_10560 PF00480 ROK family H9K57_10565 PF00224 Pyruvate kinase, barrel domain H9K57_10565 PF02887 Pyruvate kinase, alpha/beta domain H9K57_10570 PF01734 Patatin-like phospholipase H9K57_10585 PF00209 Sodium:neurotransmitter symporter family H9K57_10600 PF02378 Phosphotransferase system, EIIC H9K57_10600 PF00367 phosphotransferase system, EIIB H9K57_10605 PF01026 TatD related DNase H9K57_10610 PF09115 DNA polymerase III, delta subunit, C terminal H9K57_10615 PF02223 Thymidylate kinase H9K57_10620 PF02618 YceG-like family H9K57_10625 PF01063 Amino-transferase class IV H9K57_10630 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K57_10630 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K57_10635 PF00550 Phosphopantetheine attachment site H9K57_10645 PF00698 Acyl transferase domain H9K57_10650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K57_10650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K57_10655 PF02504 Fatty acid synthesis protein H9K57_10660 PF01783 Ribosomal L32p protein family H9K57_10665 PF02620 Large ribosomal RNA subunit accumulation protein YceD H9K57_10670 PF02545 Maf-like protein H9K57_10675 PF00849 RNA pseudouridylate synthase H9K57_10675 PF01479 S4 domain H9K57_10680 PF10150 Ribonuclease E/G family H9K57_10680 PF12111 Polyribonucleotide phosphorylase C terminal H9K57_10680 PF00575 S1 RNA binding domain H9K57_10685 PF00916 Sulfate permease family H9K57_10685 PF01740 STAS domain H9K57_10690 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K57_10695 PF12557 Cob(I)alamin adenosyltransferase N terminal H9K57_10695 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP H9K57_10705 PF00485 Phosphoribulokinase / Uridine kinase family H9K57_10710 PF10609 NUBPL iron-transfer P-loop NTPase H9K57_10715 PF01588 Putative tRNA binding domain H9K57_10715 PF09334 tRNA synthetases class I (M) H9K57_10725 PF00392 Bacterial regulatory proteins, gntR family H9K57_10725 PF07840 FadR C-terminal domain H9K57_10730 PF06450 Bacterial Na+/H+ antiporter B (NhaB) H9K57_10735 PF02600 Disulfide bond formation protein DsbB H9K57_10740 PF07517 SecA DEAD-like domain H9K57_10740 PF07516 SecA Wing and Scaffold domain H9K57_10740 PF01043 SecA preprotein cross-linking domain H9K57_10740 PF02810 SEC-C motif H9K57_10745 PF01207 Dihydrouridine synthase (Dus) H9K57_10750 PF00072 Response regulator receiver domain H9K57_10750 PF00990 Diguanylate cyclase, GGDEF domain H9K57_10755 PF02903 Alpha amylase, N-terminal ig-like domain H9K57_10755 PF00128 Alpha amylase, catalytic domain H9K57_10760 PF00005 ABC transporter H9K57_10765 PF02653 Branched-chain amino acid transport system / permease component H9K57_10775 PF04217 Protein of unknown function, DUF412 H9K57_10780 PF00871 Acetokinase family H9K57_10785 PF01515 Phosphate acetyl/butaryl transferase H9K57_10785 PF07085 DRTGG domain H9K57_10790 PF13194 Domain of unknown function (DUF4010) H9K57_10800 PF13409 Glutathione S-transferase, N-terminal domain H9K57_10805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_10805 PF00005 ABC transporter H9K57_10810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_10810 PF00005 ABC transporter H9K57_10815 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_10815 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_10820 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_10825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_10830 PF02391 MoaE protein H9K57_10835 PF02597 ThiS family H9K57_10840 PF01967 MoaC family H9K57_10845 PF00994 Probable molybdopterin binding domain H9K57_10850 PF04055 Radical SAM superfamily H9K57_10850 PF06463 Molybdenum Cofactor Synthesis C H9K57_10855 PF01933 Uncharacterised protein family UPF0052 H9K57_10860 PF01627 Hpt domain H9K57_10865 PF02954 Bacterial regulatory protein, Fis family H9K57_10865 PF00072 Response regulator receiver domain H9K57_10865 PF00158 Sigma-54 interaction domain H9K57_10870 PF17757 UvrB interaction domain H9K57_10870 PF00271 Helicase conserved C-terminal domain H9K57_10870 PF04851 Type III restriction enzyme, res subunit H9K57_10870 PF02151 UvrB/uvrC motif H9K57_10870 PF12344 Ultra-violet resistance protein B H9K57_10880 PF02508 Rnf-Nqr subunit, membrane protein H9K57_10885 PF04060 Putative Fe-S cluster H9K57_10890 PF12838 4Fe-4S dicluster domain H9K57_10890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H9K57_10890 PF10531 SLBB domain H9K57_10890 PF13375 RnfC Barrel sandwich hybrid domain H9K57_10895 PF03116 NQR2, RnfD, RnfE family H9K57_10900 PF04205 FMN-binding domain H9K57_10905 PF02508 Rnf-Nqr subunit, membrane protein H9K57_10910 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K57_10910 PF10576 Iron-sulfur binding domain of endonuclease III H9K57_10910 PF00633 Helix-hairpin-helix motif H9K57_10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_10920 PF10952 Protein of unknown function (DUF2753) H9K57_10925 PF18393 MotY N-terminal domain H9K57_10925 PF00691 OmpA family H9K57_10930 PF00929 Exonuclease H9K57_10935 PF13726 Na+-H+ antiporter family H9K57_10935 PF03553 Na+/H+ antiporter family H9K57_10945 PF00462 Glutaredoxin H9K57_10950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K57_10950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K57_10965 PF00465 Iron-containing alcohol dehydrogenase H9K57_10965 PF00171 Aldehyde dehydrogenase family H9K57_10970 PF01914 MarC family integral membrane protein H9K57_10975 PF00027 Cyclic nucleotide-binding domain H9K57_10975 PF00520 Ion transport protein H9K57_10980 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K57_10980 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K57_10985 PF03553 Na+/H+ antiporter family H9K57_11000 PF04245 37-kD nucleoid-associated bacterial protein H9K57_11005 PF07208 Protein of unknown function (DUF1414) H9K57_11010 PF00884 Sulfatase H9K57_11010 PF11893 Domain of unknown function (DUF3413) H9K57_11020 PF00850 Histone deacetylase domain H9K57_11025 PF00106 short chain dehydrogenase H9K57_11035 PF01751 Toprim domain H9K57_11035 PF01131 DNA topoisomerase H9K57_11040 PF00881 Nitroreductase family H9K57_11045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K57_11045 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_11050 PF01343 Peptidase family S49 H9K57_11055 PF00710 Asparaginase, N-terminal H9K57_11055 PF17763 Glutaminase/Asparaginase C-terminal domain H9K57_11060 PF07023 Protein of unknown function (DUF1315) H9K57_11070 PF01641 SelR domain H9K57_11075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K57_11075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K57_11080 PF01263 Aldose 1-epimerase H9K57_11085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_11085 PF00672 HAMP domain H9K57_11085 PF02743 Cache domain H9K57_11090 PF13847 Methyltransferase domain H9K57_11105 PF00245 Alkaline phosphatase H9K57_11115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_11120 PF03992 Antibiotic biosynthesis monooxygenase H9K57_11125 PF00924 Mechanosensitive ion channel H9K57_11125 PF05552 Conserved TM helix H9K57_11135 PF01425 Amidase H9K57_11140 PF13599 Pentapeptide repeats (9 copies) H9K57_11170 PF03692 Putative zinc- or iron-chelating domain H9K57_11175 PF04226 Transglycosylase associated protein H9K57_11180 PF03692 Putative zinc- or iron-chelating domain H9K57_11190 PF03313 Serine dehydratase alpha chain H9K57_11195 PF01042 Endoribonuclease L-PSP H9K57_11205 PF00230 Major intrinsic protein H9K57_11210 PF13662 Toprim domain H9K57_11210 PF02132 RecR protein H9K57_11215 PF02575 YbaB/EbfC DNA-binding family H9K57_11220 PF12169 DNA polymerase III subunits gamma and tau domain III H9K57_11220 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H9K57_11220 PF12170 DNA polymerase III tau subunit V interacting with alpha H9K57_11225 PF00156 Phosphoribosyl transferase domain H9K57_11230 PF04304 Protein of unknown function (DUF454) H9K57_11235 PF00072 Response regulator receiver domain H9K57_11240 PF03466 LysR substrate binding domain H9K57_11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_11245 PF00156 Phosphoribosyl transferase domain H9K57_11250 PF02674 Colicin V production protein H9K57_11255 PF05036 Sporulation related domain H9K57_11260 PF02875 Mur ligase family, glutamate ligase domain H9K57_11260 PF08245 Mur ligase middle domain H9K57_11265 PF01039 Carboxyl transferase domain H9K57_11265 PF17848 Acetyl-coA carboxylase zinc finger domain H9K57_11270 PF01416 tRNA pseudouridine synthase H9K57_11280 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K57_11280 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K57_11285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K57_11285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K57_11285 PF11890 Domain of unknown function (DUF3410) H9K57_11290 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K57_11290 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K57_11295 PF01266 FAD dependent oxidoreductase H9K57_11295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H9K57_11300 PF03358 NADPH-dependent FMN reductase H9K57_11305 PF08891 YfcL protein H9K57_11310 PF04315 Elongation factor P hydroxylase H9K57_11315 PF03458 UPF0126 domain H9K57_11320 PF01264 Chorismate synthase H9K57_11325 PF05175 Methyltransferase small domain H9K57_11330 PF01713 Smr domain H9K57_11335 PF00300 Histidine phosphatase superfamily (branch 1) H9K57_11340 PF16187 Middle or third domain of peptidase_M16 H9K57_11340 PF05193 Peptidase M16 inactive domain H9K57_11340 PF00675 Insulinase (Peptidase family M16) H9K57_11350 PF00378 Enoyl-CoA hydratase/isomerase H9K57_11350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K57_11350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K57_11355 PF00108 Thiolase, N-terminal domain H9K57_11355 PF02803 Thiolase, C-terminal domain H9K57_11360 PF04542 Sigma-70 region 2 H9K57_11360 PF08281 Sigma-70, region 4 H9K57_11370 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K57_11375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K57_11380 PF04333 MlaA lipoprotein H9K57_11390 PF03918 Cytochrome C biogenesis protein H9K57_11395 PF08534 Redoxin H9K57_11400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K57_11400 PF01578 Cytochrome C assembly protein H9K57_11405 PF03100 CcmE H9K57_11410 PF04995 Heme exporter protein D (CcmD) H9K57_11415 PF01578 Cytochrome C assembly protein H9K57_11420 PF03379 CcmB protein H9K57_11425 PF00005 ABC transporter H9K57_11435 PF01584 CheW-like domain H9K57_11445 PF13614 AAA domain H9K57_11450 PF01339 CheB methylesterase H9K57_11450 PF00072 Response regulator receiver domain H9K57_11455 PF00072 Response regulator receiver domain H9K57_11455 PF01584 CheW-like domain H9K57_11455 PF02895 Signal transducing histidine kinase, homodimeric domain H9K57_11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_11455 PF01627 Hpt domain H9K57_11460 PF04344 Chemotaxis phosphatase, CheZ H9K57_11465 PF00072 Response regulator receiver domain H9K57_11470 PF04545 Sigma-70, region 4 H9K57_11470 PF04539 Sigma-70 region 3 H9K57_11470 PF04542 Sigma-70 region 2 H9K57_11475 PF10609 NUBPL iron-transfer P-loop NTPase H9K57_11480 PF00448 SRP54-type protein, GTPase domain H9K57_11485 PF00771 FHIPEP family H9K57_11490 PF01312 FlhB HrpN YscU SpaS Family H9K57_11495 PF01311 Bacterial export proteins, family 1 H9K57_11500 PF01313 Bacterial export proteins, family 3 H9K57_11505 PF00813 FliP family H9K57_11510 PF04347 Flagellar biosynthesis protein, FliO H9K57_11515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K57_11520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K57_11520 PF02154 Flagellar motor switch protein FliM H9K57_11540 PF18269 T3SS EscN ATPase C-terminal domain H9K57_11540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K57_11550 PF01706 FliG C-terminal domain H9K57_11550 PF14841 FliG middle domain H9K57_11550 PF14842 FliG N-terminal domain H9K57_11555 PF01514 Secretory protein of YscJ/FliF family H9K57_11555 PF08345 Flagellar M-ring protein C-terminal H9K57_11560 PF02049 Flagellar hook-basal body complex protein FliE H9K57_11565 PF00072 Response regulator receiver domain H9K57_11565 PF02954 Bacterial regulatory protein, Fis family H9K57_11565 PF00158 Sigma-54 interaction domain H9K57_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_11570 PF00512 His Kinase A (phospho-acceptor) domain H9K57_11570 PF13188 PAS domain H9K57_11575 PF02954 Bacterial regulatory protein, Fis family H9K57_11575 PF06490 Flagellar regulatory protein FleQ H9K57_11575 PF00158 Sigma-54 interaction domain H9K57_11580 PF02561 Flagellar protein FliS H9K57_11590 PF07196 Flagellin hook IN motif H9K57_11590 PF07195 Flagellar hook-associated protein 2 C-terminus H9K57_11590 PF02465 Flagellar hook-associated protein 2 N-terminus H9K57_11595 PF03646 FlaG protein H9K57_11600 PF00669 Bacterial flagellin N-terminal helical region H9K57_11600 PF00700 Bacterial flagellin C-terminal helical region H9K57_11600 PF07196 Flagellin hook IN motif H9K57_11610 PF00669 Bacterial flagellin N-terminal helical region H9K57_11610 PF00700 Bacterial flagellin C-terminal helical region H9K57_11610 PF07196 Flagellin hook IN motif H9K57_11615 PF04261 Dyp-type peroxidase family H9K57_11620 PF11143 Protein of unknown function (DUF2919) H9K57_11640 PF03960 ArsC family H9K57_11645 PF07687 Peptidase dimerisation domain H9K57_11645 PF01546 Peptidase family M20/M25/M40 H9K57_11660 PF06804 NlpB/DapX lipoprotein H9K57_11665 PF00701 Dihydrodipicolinate synthetase family H9K57_11670 PF01842 ACT domain H9K57_11700 PF00578 AhpC/TSA family H9K57_11715 PF00580 UvrD/REP helicase N-terminal domain H9K57_11715 PF13361 UvrD-like helicase C-terminal domain H9K57_11730 PF00512 His Kinase A (phospho-acceptor) domain H9K57_11730 PF09308 LuxQ, periplasmic H9K57_11730 PF00072 Response regulator receiver domain H9K57_11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_11750 PF00563 EAL domain H9K57_11750 PF12792 CSS motif domain associated with EAL H9K57_11760 PF00313 'Cold-shock' DNA-binding domain H9K57_11780 PF00313 'Cold-shock' DNA-binding domain H9K57_11785 PF02899 Phage integrase, N-terminal SAM-like domain H9K57_11785 PF00589 Phage integrase family H9K57_11790 PF12221 Bacterial membrane protein N terminal H9K57_11790 PF01145 SPFH domain / Band 7 family H9K57_11800 PF06965 Na+/H+ antiporter 1 H9K57_11805 PF00694 Aconitase C-terminal domain H9K57_11805 PF00330 Aconitase family (aconitate hydratase) H9K57_11810 PF00313 'Cold-shock' DNA-binding domain H9K57_11820 PF00578 AhpC/TSA family H9K57_11825 PF01594 AI-2E family transporter H9K57_11835 PF01435 Peptidase family M48 H9K57_11835 PF13181 Tetratricopeptide repeat H9K57_11840 PF03960 ArsC family H9K57_11845 PF03358 NADPH-dependent FMN reductase H9K57_11860 PF00860 Permease family H9K57_11870 PF02769 AIR synthase related protein, C-terminal domain H9K57_11870 PF00586 AIR synthase related protein, N-terminal domain H9K57_11875 PF00551 Formyl transferase H9K57_11880 PF13230 Glutamine amidotransferases class-II H9K57_11885 PF13580 SIS domain H9K57_11890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_11890 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_11890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_11890 PF09317 Domain of unknown function (DUF1974) H9K57_11895 PF01740 STAS domain H9K57_11895 PF00916 Sulfate permease family H9K57_11900 PF00583 Acetyltransferase (GNAT) family H9K57_11920 PF00929 Exonuclease H9K57_11925 PF00075 RNase H H9K57_11930 PF08241 Methyltransferase domain H9K57_11935 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9K57_11935 PF00753 Metallo-beta-lactamase superfamily H9K57_11940 PF01476 LysM domain H9K57_11940 PF01464 Transglycosylase SLT domain H9K57_11950 PF03372 Endonuclease/Exonuclease/phosphatase family H9K57_11955 PF00543 Nitrogen regulatory protein P-II H9K57_11960 PF00034 Cytochrome c H9K57_11965 PF01171 PP-loop family H9K57_11965 PF09179 TilS substrate binding domain H9K57_11965 PF11734 TilS substrate C-terminal domain H9K57_11970 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H9K57_11975 PF01336 OB-fold nucleic acid binding domain H9K57_11975 PF02811 PHP domain H9K57_11975 PF14579 Helix-hairpin-helix motif H9K57_11975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K57_11975 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K57_11980 PF01351 Ribonuclease HII H9K57_11985 PF02684 Lipid-A-disaccharide synthetase H9K57_11990 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H9K57_11990 PF00132 Bacterial transferase hexapeptide (six repeats) H9K57_11995 PF07977 FabA-like domain H9K57_12000 PF00132 Bacterial transferase hexapeptide (six repeats) H9K57_12000 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H9K57_12005 PF03938 Outer membrane protein (OmpH-like) H9K57_12010 PF01103 Surface antigen H9K57_12010 PF07244 Surface antigen variable number repeat H9K57_12015 PF17820 PDZ domain H9K57_12015 PF02163 Peptidase family M50 H9K57_12020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H9K57_12020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H9K57_12020 PF13288 DXP reductoisomerase C-terminal domain H9K57_12030 PF01255 Putative undecaprenyl diphosphate synthase H9K57_12035 PF01765 Ribosome recycling factor H9K57_12040 PF00696 Amino acid kinase family H9K57_12045 PF00889 Elongation factor TS H9K57_12050 PF00318 Ribosomal protein S2 H9K57_12055 PF00557 Metallopeptidase family M24 H9K57_12060 PF08335 GlnD PII-uridylyltransferase H9K57_12060 PF01966 HD domain H9K57_12060 PF01909 Nucleotidyltransferase domain H9K57_12060 PF01842 ACT domain H9K57_12065 PF11944 Protein of unknown function (DUF3461) H9K57_12070 PF00849 RNA pseudouridylate synthase H9K57_12075 PF04287 tRNA pseudouridine synthase C H9K57_12100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H9K57_12105 PF03806 AbgT putative transporter family H9K57_12110 PF00444 Ribosomal protein L36 H9K57_12115 PF01197 Ribosomal protein L31 H9K57_12120 PF18389 TrmO C-terminal domain H9K57_12120 PF01980 tRNA-methyltransferase O H9K57_12125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K57_12125 PF04073 Aminoacyl-tRNA editing domain H9K57_12125 PF03129 Anticodon binding domain H9K57_12135 PF06786 Uncharacterised protein family (UPF0253) H9K57_12145 PF00209 Sodium:neurotransmitter symporter family H9K57_12160 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K57_12160 PF03449 Transcription elongation factor, N-terminal H9K57_12165 PF00270 DEAD/DEAH box helicase H9K57_12165 PF00271 Helicase conserved C-terminal domain H9K57_12165 PF00570 HRDC domain H9K57_12165 PF09382 RQC domain H9K57_12165 PF16124 RecQ zinc-binding H9K57_12170 PF00817 impB/mucB/samB family H9K57_12170 PF11799 impB/mucB/samB family C-terminal domain H9K57_12170 PF11798 IMS family HHH motif H9K57_12185 PF02424 ApbE family H9K57_12190 PF00970 Oxidoreductase FAD-binding domain H9K57_12190 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_12190 PF00175 Oxidoreductase NAD-binding domain H9K57_12195 PF02508 Rnf-Nqr subunit, membrane protein H9K57_12200 PF02508 Rnf-Nqr subunit, membrane protein H9K57_12205 PF04205 FMN-binding domain H9K57_12210 PF03116 NQR2, RnfD, RnfE family H9K57_12215 PF11973 NQRA C-terminal domain H9K57_12215 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) H9K57_12220 PF01722 BolA-like protein H9K57_12225 PF05175 Methyltransferase small domain H9K57_12230 PF03923 Uncharacterized lipoprotein H9K57_12230 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K57_12235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K57_12240 PF07690 Major Facilitator Superfamily H9K57_12250 PF04542 Sigma-70 region 2 H9K57_12250 PF04545 Sigma-70, region 4 H9K57_12265 PF03502 Nucleoside-specific channel-forming protein, Tsx H9K57_12270 PF08546 Ketopantoate reductase PanE/ApbA C terminal H9K57_12270 PF02558 Ketopantoate reductase PanE/ApbA H9K57_12275 PF01965 DJ-1/PfpI family H9K57_12280 PF00266 Aminotransferase class-V H9K57_12285 PF17158 Membrane-associated sensor, integral membrane domain H9K57_12285 PF00990 Diguanylate cyclase, GGDEF domain H9K57_12290 PF02657 Fe-S metabolism associated domain H9K57_12295 PF00899 ThiF family H9K57_12300 PF03562 MltA specific insert domain H9K57_12300 PF06725 3D domain H9K57_12310 PF00696 Amino acid kinase family H9K57_12310 PF00583 Acetyltransferase (GNAT) family H9K57_12320 PF13538 UvrD-like helicase C-terminal domain H9K57_12325 PF12705 PD-(D/E)XK nuclease superfamily H9K57_12325 PF00580 UvrD/REP helicase N-terminal domain H9K57_12325 PF13361 UvrD-like helicase C-terminal domain H9K57_12330 PF17946 RecC C-terminal domain H9K57_12335 PF11893 Domain of unknown function (DUF3413) H9K57_12335 PF00884 Sulfatase H9K57_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_12345 PF03466 LysR substrate binding domain H9K57_12350 PF07130 YebG protein H9K57_12355 PF14602 Hexapeptide repeat of succinyl-transferase H9K57_12355 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H9K57_12360 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K57_12365 PF07690 Major Facilitator Superfamily H9K57_12370 PF00230 Major intrinsic protein H9K57_12375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K57_12375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K57_12380 PF08220 DeoR-like helix-turn-helix domain H9K57_12380 PF00455 DeoR C terminal sensor domain H9K57_12385 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H9K57_12385 PF01266 FAD dependent oxidoreductase H9K57_12390 PF01544 CorA-like Mg2+ transporter protein H9K57_12410 PF01588 Putative tRNA binding domain H9K57_12415 PF00356 Bacterial regulatory proteins, lacI family H9K57_12420 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K57_12420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K57_12420 PF14579 Helix-hairpin-helix motif H9K57_12420 PF02811 PHP domain H9K57_12420 PF00929 Exonuclease H9K57_12430 PF00474 Sodium:solute symporter family H9K57_12435 PF01263 Aldose 1-epimerase H9K57_12440 PF10509 Galactokinase galactose-binding signature H9K57_12440 PF08544 GHMP kinases C terminal H9K57_12440 PF00288 GHMP kinases N terminal domain H9K57_12445 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9K57_12445 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9K57_12450 PF16363 GDP-mannose 4,6 dehydratase H9K57_12455 PF00356 Bacterial regulatory proteins, lacI family H9K57_12460 PF02929 Beta galactosidase small chain H9K57_12460 PF16353 Domain of unknown function(DUF4981) H9K57_12460 PF00703 Glycosyl hydrolases family 2 H9K57_12460 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K57_12460 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K57_12465 PF04074 YhcH/YjgK/YiaL H9K57_12470 PF13520 Amino acid permease H9K57_12475 PF03466 LysR substrate binding domain H9K57_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_12505 PF00437 Type II/IV secretion system protein H9K57_12535 PF04972 BON domain H9K57_12535 PF00263 Bacterial type II and III secretion system protein H9K57_12535 PF13629 Pilus formation protein N terminal region H9K57_12560 PF12833 Helix-turn-helix domain H9K57_12560 PF02805 Metal binding domain of Ada H9K57_12565 PF00501 AMP-binding enzyme H9K57_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_12575 PF03466 LysR substrate binding domain H9K57_12580 PF03144 Elongation factor Tu domain 2 H9K57_12580 PF00009 Elongation factor Tu GTP binding domain H9K57_12580 PF14492 Elongation Factor G, domain II H9K57_12580 PF00679 Elongation factor G C-terminus H9K57_12580 PF03764 Elongation factor G, domain IV H9K57_12585 PF18073 Rubredoxin metal binding domain H9K57_12595 PF18429 Domain of unknown function (DUF5609) H9K57_12605 PF01048 Phosphorylase superfamily H9K57_12610 PF01676 Metalloenzyme superfamily H9K57_12615 PF00591 Glycosyl transferase family, a/b domain H9K57_12615 PF02885 Glycosyl transferase family, helical bundle domain H9K57_12615 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H9K57_12620 PF01791 DeoC/LacD family aldolase H9K57_12625 PF07662 Na+ dependent nucleoside transporter C-terminus H9K57_12625 PF01773 Na+ dependent nucleoside transporter N-terminus H9K57_12625 PF07670 Nucleoside recognition H9K57_12630 PF01026 TatD related DNase H9K57_12640 PF00009 Elongation factor Tu GTP binding domain H9K57_12640 PF03144 Elongation factor Tu domain 2 H9K57_12640 PF16658 Class II release factor RF3, C-terminal domain H9K57_12660 PF13508 Acetyltransferase (GNAT) domain H9K57_12665 PF02036 SCP-2 sterol transfer family H9K57_12670 PF00563 EAL domain H9K57_12670 PF03707 Bacterial signalling protein N terminal repeat H9K57_12670 PF00990 Diguanylate cyclase, GGDEF domain H9K57_12675 PF01136 Peptidase family U32 H9K57_12680 PF01136 Peptidase family U32 H9K57_12685 PF01554 MatE H9K57_12695 PF07719 Tetratricopeptide repeat H9K57_12695 PF13181 Tetratricopeptide repeat H9K57_12700 PF00013 KH domain H9K57_12700 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H9K57_12700 PF01138 3' exoribonuclease family, domain 1 H9K57_12700 PF03725 3' exoribonuclease family, domain 2 H9K57_12700 PF00575 S1 RNA binding domain H9K57_12705 PF00312 Ribosomal protein S15 H9K57_12710 PF09157 Pseudouridine synthase II TruB, C-terminal H9K57_12710 PF16198 tRNA pseudouridylate synthase B C-terminal domain H9K57_12710 PF01509 TruB family pseudouridylate synthase (N terminal domain) H9K57_12715 PF02033 Ribosome-binding factor A H9K57_12720 PF08364 Bacterial translation initiation factor IF-2 associated region H9K57_12720 PF04760 Translation initiation factor IF-2, N-terminal region H9K57_12720 PF11987 Translation-initiation factor 2 H9K57_12720 PF00009 Elongation factor Tu GTP binding domain H9K57_12725 PF13184 NusA-like KH domain H9K57_12725 PF08529 NusA N-terminal domain H9K57_12725 PF00575 S1 RNA binding domain H9K57_12730 PF02576 RimP N-terminal domain H9K57_12730 PF17384 RimP C-terminal SH3 domain H9K57_12745 PF03840 Preprotein translocase SecG subunit H9K57_12750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K57_12750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K57_12750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K57_12750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K57_12755 PF00809 Pterin binding enzyme H9K57_12760 PF01434 Peptidase family M41 H9K57_12760 PF06480 FtsH Extracellular H9K57_12760 PF17862 AAA+ lid domain H9K57_12760 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_12765 PF01728 FtsJ-like methyltransferase H9K57_12770 PF01985 CRS1 / YhbY (CRM) domain H9K57_12775 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K57_12775 PF03449 Transcription elongation factor, N-terminal H9K57_12780 PF13609 Gram-negative porin H9K57_12785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H9K57_12795 PF00579 tRNA synthetases class I (W and Y) H9K57_12800 PF08525 Opacity-associated protein A N-terminal motif H9K57_12800 PF01476 LysM domain H9K57_12800 PF01551 Peptidase family M23 H9K57_12805 PF00873 AcrB/AcrD/AcrF family H9K57_12815 PF01521 Iron-sulphur cluster biosynthesis H9K57_12820 PF00202 Aminotransferase class-III H9K57_12825 PF01594 AI-2E family transporter H9K57_12830 PF05175 Methyltransferase small domain H9K57_12830 PF08468 Methyltransferase small domain N-terminal H9K57_12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_12835 PF00512 His Kinase A (phospho-acceptor) domain H9K57_12835 PF00072 Response regulator receiver domain H9K57_12835 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_12840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_12845 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_12850 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_12850 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_12855 PF00005 ABC transporter H9K57_12855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_12860 PF00005 ABC transporter H9K57_12860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_12870 PF01869 BadF/BadG/BcrA/BcrD ATPase family H9K57_12875 PF02838 Glycosyl hydrolase family 20, domain 2 H9K57_12875 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K57_12880 PF06165 Glycosyltransferase family 36 H9K57_12880 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H9K57_12885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K57_12885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K57_12885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K57_12885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K57_12890 PF00005 ABC transporter H9K57_12890 PF08402 TOBE domain H9K57_12900 PF13416 Bacterial extracellular solute-binding protein H9K57_12905 PF00909 Ammonium Transporter Family H9K57_12910 PF00543 Nitrogen regulatory protein P-II H9K57_12915 PF06062 Uncharacterised protein family (UPF0231) H9K57_12920 PF00330 Aconitase family (aconitate hydratase) H9K57_12920 PF06434 Aconitate hydratase 2 N-terminus H9K57_12920 PF11791 Aconitate B N-terminal domain H9K57_12925 PF01734 Patatin-like phospholipase H9K57_12930 PF00912 Transglycosylase H9K57_12930 PF00905 Penicillin binding protein transpeptidase domain H9K57_12930 PF14814 Bifunctional transglycosylase second domain H9K57_12935 PF00270 DEAD/DEAH box helicase H9K57_12935 PF04408 Helicase associated domain (HA2) H9K57_12935 PF00271 Helicase conserved C-terminal domain H9K57_12935 PF08482 ATP-dependent helicase C-terminal H9K57_12940 PF17746 SfsA N-terminal OB domain H9K57_12940 PF03749 Sugar fermentation stimulation protein RE domain H9K57_12945 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K57_12950 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K57_12955 PF01743 Poly A polymerase head domain H9K57_12955 PF12626 Polymerase A arginine-rich C-terminus H9K57_12955 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K57_12960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K57_12965 PF02548 Ketopantoate hydroxymethyltransferase H9K57_12970 PF02569 Pantoate-beta-alanine ligase H9K57_12975 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K57_12980 PF01061 ABC-2 type transporter H9K57_12985 PF00005 ABC transporter H9K57_12990 PF01740 STAS domain H9K57_12990 PF00916 Sulfate permease family H9K57_12995 PF00484 Carbonic anhydrase H9K57_13000 PF00156 Phosphoribosyl transferase domain H9K57_13005 PF00440 Bacterial regulatory proteins, tetR family H9K57_13010 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_13010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K57_13015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K57_13015 PF00364 Biotin-requiring enzyme H9K57_13015 PF02817 e3 binding domain H9K57_13020 PF17831 Pyruvate dehydrogenase E1 component middle domain H9K57_13020 PF00456 Transketolase, thiamine diphosphate binding domain H9K57_13025 PF00392 Bacterial regulatory proteins, gntR family H9K57_13025 PF07729 FCD domain H9K57_13030 PF01510 N-acetylmuramoyl-L-alanine amidase H9K57_13035 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H9K57_13035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H9K57_13040 PF07963 Prokaryotic N-terminal methylation motif H9K57_13040 PF00114 Pilin (bacterial filament) H9K57_13045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K57_13045 PF00437 Type II/IV secretion system protein H9K57_13050 PF00482 Type II secretion system (T2SS), protein F H9K57_13055 PF06750 Bacterial Peptidase A24 N-terminal domain H9K57_13055 PF01478 Type IV leader peptidase family H9K57_13060 PF01121 Dephospho-CoA kinase H9K57_13065 PF07072 Cell division protein H9K57_13070 PF03884 DNA gyrase inhibitor YacG H9K57_13075 PF01245 Ribosomal protein L19 H9K57_13080 PF01746 tRNA (Guanine-1)-methyltransferase H9K57_13085 PF05239 PRC-barrel domain H9K57_13085 PF01782 RimM N-terminal domain H9K57_13090 PF00886 Ribosomal protein S16 H9K57_13095 PF02978 Signal peptide binding domain H9K57_13095 PF00448 SRP54-type protein, GTPase domain H9K57_13095 PF02881 SRP54-type protein, helical bundle domain H9K57_13100 PF01578 Cytochrome C assembly protein H9K57_13105 PF00571 CBS domain H9K57_13105 PF03471 Transporter associated domain H9K57_13105 PF01595 Cyclin M transmembrane N-terminal domain H9K57_13110 PF02664 S-Ribosylhomocysteinase (LuxS) H9K57_13120 PF04262 Glutamate-cysteine ligase H9K57_13125 PF00675 Insulinase (Peptidase family M16) H9K57_13125 PF05193 Peptidase M16 inactive domain H9K57_13130 PF09335 SNARE associated Golgi protein H9K57_13135 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_13135 PF00107 Zinc-binding dehydrogenase H9K57_13140 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit H9K57_13145 PF02436 Conserved carboxylase domain H9K57_13145 PF00364 Biotin-requiring enzyme H9K57_13145 PF00682 HMGL-like H9K57_13150 PF04277 Oxaloacetate decarboxylase, gamma chain H9K57_13190 PF02599 Global regulator protein family H9K57_13195 PF13840 ACT domain H9K57_13195 PF01842 ACT domain H9K57_13195 PF00696 Amino acid kinase family H9K57_13200 PF02272 DHHA1 domain H9K57_13200 PF01411 tRNA synthetases class II (A) H9K57_13200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K57_13205 PF02631 RecX family H9K57_13210 PF00154 recA bacterial DNA recombination protein H9K57_13215 PF02464 Competence-damaged protein H9K57_13220 PF00488 MutS domain V H9K57_13220 PF05190 MutS family domain IV H9K57_13220 PF05188 MutS domain II H9K57_13220 PF01624 MutS domain I H9K57_13220 PF05192 MutS domain III H9K57_13225 PF04545 Sigma-70, region 4 H9K57_13225 PF00140 Sigma-70 factor, region 1.2 H9K57_13225 PF04542 Sigma-70 region 2 H9K57_13225 PF04539 Sigma-70 region 3 H9K57_13230 PF01551 Peptidase family M23 H9K57_13230 PF01476 LysM domain H9K57_13240 PF01975 Survival protein SurE H9K57_13245 PF01142 tRNA pseudouridine synthase D (TruD) H9K57_13250 PF02542 YgbB family H9K57_13255 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9K57_13260 PF04977 Septum formation initiator H9K57_13265 PF00113 Enolase, C-terminal TIM barrel domain H9K57_13265 PF03952 Enolase, N-terminal domain H9K57_13270 PF06418 CTP synthase N-terminus H9K57_13270 PF00117 Glutamine amidotransferase class-I H9K57_13275 PF03819 MazG nucleotide pyrophosphohydrolase domain H9K57_13280 PF13291 ACT domain H9K57_13280 PF04607 Region found in RelA / SpoT proteins H9K57_13280 PF02824 TGS domain H9K57_13285 PF01938 TRAM domain H9K57_13285 PF05958 tRNA (Uracil-5-)-methyltransferase H9K57_13290 PF00512 His Kinase A (phospho-acceptor) domain H9K57_13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_13290 PF01627 Hpt domain H9K57_13290 PF00072 Response regulator receiver domain H9K57_13290 PF00672 HAMP domain H9K57_13290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K57_13295 PF01648 4'-phosphopantetheinyl transferase superfamily H9K57_13300 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H9K57_13305 PF02565 Recombination protein O C terminal H9K57_13305 PF11967 Recombination protein O N terminal H9K57_13310 PF07650 KH domain H9K57_13310 PF01926 50S ribosome-binding GTPase H9K57_13315 PF00035 Double-stranded RNA binding motif H9K57_13315 PF14622 Ribonuclease-III-like H9K57_13320 PF10502 Signal peptidase, peptidase S26 H9K57_13325 PF03144 Elongation factor Tu domain 2 H9K57_13325 PF00679 Elongation factor G C-terminus H9K57_13325 PF00009 Elongation factor Tu GTP binding domain H9K57_13325 PF06421 GTP-binding protein LepA C-terminus H9K57_13335 PF17188 MucB/RseB C-terminal domain H9K57_13335 PF03888 MucB/RseB N-terminal domain H9K57_13340 PF03873 Anti sigma-E protein RseA, C-terminal domain H9K57_13340 PF03872 Anti sigma-E protein RseA, N-terminal domain H9K57_13345 PF04542 Sigma-70 region 2 H9K57_13345 PF08281 Sigma-70, region 4 H9K57_13350 PF02910 Fumarate reductase flavoprotein C-term H9K57_13350 PF00890 FAD binding domain H9K57_13355 PF03937 Flavinator of succinate dehydrogenase H9K57_13360 PF01571 Aminomethyltransferase folate-binding domain H9K57_13375 PF01494 FAD binding domain H9K57_13380 PF01494 FAD binding domain H9K57_13385 PF03695 Uncharacterised protein family (UPF0149) H9K57_13390 PF05164 Cell division protein ZapA H9K57_13400 PF01812 5-formyltetrahydrofolate cyclo-ligase family H9K57_13405 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H9K57_13410 PF01842 ACT domain H9K57_13410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K57_13410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K57_13415 PF04402 Protein of unknown function (DUF541) H9K57_13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_13420 PF03466 LysR substrate binding domain H9K57_13425 PF01810 LysE type translocator H9K57_13430 PF04073 Aminoacyl-tRNA editing domain H9K57_13435 PF05552 Conserved TM helix H9K57_13435 PF00924 Mechanosensitive ion channel H9K57_13440 PF01116 Fructose-bisphosphate aldolase class-II H9K57_13445 PF00162 Phosphoglycerate kinase H9K57_13450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K57_13450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K57_13455 PF07715 TonB-dependent Receptor Plug Domain H9K57_13455 PF00593 TonB dependent receptor H9K57_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_13460 PF03466 LysR substrate binding domain H9K57_13465 PF02780 Transketolase, C-terminal domain H9K57_13465 PF00456 Transketolase, thiamine diphosphate binding domain H9K57_13465 PF02779 Transketolase, pyrimidine binding domain H9K57_13470 PF02773 S-adenosylmethionine synthetase, C-terminal domain H9K57_13470 PF02772 S-adenosylmethionine synthetase, central domain H9K57_13470 PF00438 S-adenosylmethionine synthetase, N-terminal domain H9K57_13480 PF17283 SprT-like zinc ribbon domain H9K57_13480 PF10263 SprT-like family H9K57_13485 PF04231 Endonuclease I H9K57_13490 PF04452 RNA methyltransferase H9K57_13495 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H9K57_13495 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H9K57_13500 PF02622 Uncharacterized ACR, COG1678 H9K57_13505 PF03652 Holliday junction resolvase H9K57_13510 PF00437 Type II/IV secretion system protein H9K57_13515 PF00437 Type II/IV secretion system protein H9K57_13520 PF01168 Alanine racemase, N-terminal domain H9K57_13525 PF14748 Pyrroline-5-carboxylate reductase dimerisation H9K57_13525 PF03807 NADP oxidoreductase coenzyme F420-dependent H9K57_13530 PF02325 YGGT family H9K57_13535 PF02594 Uncharacterised ACR, YggU family COG1872 H9K57_13545 PF01725 Ham1 family H9K57_13550 PF06969 HemN C-terminal domain H9K57_13550 PF04055 Radical SAM superfamily H9K57_13555 PF04960 Glutaminase H9K57_13560 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K57_13565 PF02390 Putative methyltransferase H9K57_13570 PF14815 NUDIX domain H9K57_13570 PF00633 Helix-hairpin-helix motif H9K57_13570 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K57_13575 PF04362 Bacterial Fe(2+) trafficking H9K57_13580 PF01464 Transglycosylase SLT domain H9K57_13580 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9K57_13620 PF17200 Single Cache domain 2 H9K57_13620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_13620 PF00672 HAMP domain H9K57_13650 PF00171 Aldehyde dehydrogenase family H9K57_13675 PF00072 Response regulator receiver domain H9K57_13680 PF00356 Bacterial regulatory proteins, lacI family H9K57_13680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K57_13685 PF04794 YdjC-like protein H9K57_13690 PF02056 Family 4 glycosyl hydrolase H9K57_13690 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K57_13695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H9K57_13700 PF02378 Phosphotransferase system, EIIC H9K57_13705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_13710 PF01522 Polysaccharide deacetylase H9K57_13720 PF00106 short chain dehydrogenase H9K57_13725 PF10011 Predicted membrane protein (DUF2254) H9K57_13735 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K57_13740 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K57_13745 PF00883 Cytosol aminopeptidase family, catalytic domain H9K57_13745 PF02789 Cytosol aminopeptidase family, N-terminal domain H9K57_13750 PF04364 DNA polymerase III chi subunit, HolC H9K57_13755 PF08264 Anticodon-binding domain of tRNA H9K57_13755 PF00133 tRNA synthetases class I (I, L, M and V) H9K57_13755 PF10458 Valyl tRNA synthetase tRNA binding arm H9K57_13765 PF00583 Acetyltransferase (GNAT) family H9K57_13775 PF06877 Regulator of ribonuclease activity B H9K57_13785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K57_13785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K57_13795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K57_13795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K57_13800 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain H9K57_13800 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain H9K57_13805 PF01042 Endoribonuclease L-PSP H9K57_13810 PF01553 Acyltransferase H9K57_13815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K57_13820 PF01722 BolA-like protein H9K57_13830 PF05494 MlaC protein H9K57_13835 PF02470 MlaD protein H9K57_13840 PF02405 Permease MlaE H9K57_13845 PF00005 ABC transporter H9K57_13850 PF01699 Sodium/calcium exchanger protein H9K57_13855 PF00571 CBS domain H9K57_13855 PF01380 SIS domain H9K57_13865 PF03968 OstA-like protein H9K57_13870 PF00005 ABC transporter H9K57_13870 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K57_13875 PF04552 Sigma-54, DNA binding domain H9K57_13875 PF00309 Sigma-54 factor, Activator interacting domain (AID) H9K57_13875 PF04963 Sigma-54 factor, core binding domain H9K57_13880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K57_13885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_13890 PF03668 P-loop ATPase protein family H9K57_13895 PF00381 PTS HPr component phosphorylation site H9K57_13900 PF03448 MgtE intracellular N domain H9K57_13900 PF00571 CBS domain H9K57_13900 PF01769 Divalent cation transporter H9K57_13905 PF01523 Putative modulator of DNA gyrase H9K57_13910 PF04751 Protein of unknown function (DUF615) H9K57_13915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K57_13915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K57_13920 PF00849 RNA pseudouridylate synthase H9K57_13930 PF00271 Helicase conserved C-terminal domain H9K57_13930 PF12137 RNA polymerase recycling family C-terminal H9K57_13930 PF00176 SNF2 family N-terminal domain H9K57_13930 PF18339 RapA N-terminal Tudor like domain 1 H9K57_13930 PF18337 RapA N-terminal Tudor like domain H9K57_13935 PF13638 PIN domain H9K57_13935 PF02562 PhoH-like protein H9K57_13940 PF01523 Putative modulator of DNA gyrase H9K57_13945 PF00795 Carbon-nitrogen hydrolase H9K57_13950 PF13116 Protein of unknown function H9K57_13950 PF13502 AsmA-like C-terminal region H9K57_13955 PF00575 S1 RNA binding domain H9K57_13955 PF10150 Ribonuclease E/G family H9K57_13960 PF02545 Maf-like protein H9K57_13965 PF04093 rod shape-determining protein MreD H9K57_13970 PF04085 rod shape-determining protein MreC H9K57_14010 PF07963 Prokaryotic N-terminal methylation motif H9K57_14020 PF00482 Type II secretion system (T2SS), protein F H9K57_14025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K57_14025 PF00437 Type II/IV secretion system protein H9K57_14035 PF13401 AAA domain H9K57_14035 PF01471 Putative peptidoglycan binding domain H9K57_14040 PF07660 Secretin and TonB N terminus short domain H9K57_14040 PF03958 Bacterial type II/III secretion system short domain H9K57_14040 PF00263 Bacterial type II and III secretion system protein H9K57_14040 PF11741 AMIN domain H9K57_14060 PF00563 EAL domain H9K57_14060 PF17157 Gammaproteobacterial periplasmic sensor domain H9K57_14060 PF00990 Diguanylate cyclase, GGDEF domain H9K57_14065 PF00436 Single-strand binding protein family H9K57_14070 PF00196 Bacterial regulatory proteins, luxR family H9K57_14075 PF00483 Nucleotidyl transferase H9K57_14080 PF00005 ABC transporter H9K57_14080 PF17755 UvrA DNA-binding domain H9K57_14080 PF17760 UvrA interaction domain H9K57_14090 PF00266 Aminotransferase class-V H9K57_14095 PF01842 ACT domain H9K57_14095 PF00696 Amino acid kinase family H9K57_14100 PF00809 Pterin binding enzyme H9K57_14100 PF02574 Homocysteine S-methyltransferase H9K57_14100 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9K57_14100 PF02607 B12 binding domain H9K57_14100 PF02310 B12 binding domain H9K57_14105 PF00999 Sodium/hydrogen exchanger family H9K57_14120 PF13358 DDE superfamily endonuclease H9K57_14140 PF01507 Phosphoadenosine phosphosulfate reductase family H9K57_14145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K57_14145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K57_14150 PF00175 Oxidoreductase NAD-binding domain H9K57_14150 PF00258 Flavodoxin H9K57_14150 PF00667 FAD binding domain H9K57_14170 PF01207 Dihydrouridine synthase (Dus) H9K57_14175 PF01475 Ferric uptake regulator family H9K57_14185 PF00342 Phosphoglucose isomerase H9K57_14190 PF01894 Uncharacterised protein family UPF0047 H9K57_14200 PF01168 Alanine racemase, N-terminal domain H9K57_14200 PF00842 Alanine racemase, C-terminal domain H9K57_14205 PF03796 DnaB-like helicase C terminal domain H9K57_14205 PF00772 DnaB-like helicase N terminal domain H9K57_14215 PF03948 Ribosomal protein L9, C-terminal domain H9K57_14215 PF01281 Ribosomal protein L9, N-terminal domain H9K57_14220 PF01084 Ribosomal protein S18 H9K57_14225 PF00436 Single-strand binding protein family H9K57_14230 PF01250 Ribosomal protein S6 H9K57_14235 PF00834 Ribulose-phosphate 3 epimerase family H9K57_14240 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K57_14250 PF01761 3-dehydroquinate synthase H9K57_14255 PF01202 Shikimate kinase H9K57_14260 PF07660 Secretin and TonB N terminus short domain H9K57_14260 PF03958 Bacterial type II/III secretion system short domain H9K57_14260 PF00263 Bacterial type II and III secretion system protein H9K57_14260 PF11741 AMIN domain H9K57_14265 PF04351 Pilus assembly protein, PilP H9K57_14275 PF05137 Fimbrial assembly protein (PilN) H9K57_14285 PF00912 Transglycosylase H9K57_14285 PF00905 Penicillin binding protein transpeptidase domain H9K57_14285 PF17092 Penicillin-binding protein OB-like domain H9K57_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_14290 PF03466 LysR substrate binding domain H9K57_14295 PF00462 Glutaredoxin H9K57_14295 PF08534 Redoxin H9K57_14305 PF00583 Acetyltransferase (GNAT) family H9K57_14305 PF14698 Argininosuccinate lyase C-terminal H9K57_14305 PF00206 Lyase H9K57_14310 PF00764 Arginosuccinate synthase H9K57_14315 PF00696 Amino acid kinase family H9K57_14320 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K57_14320 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K57_14325 PF07687 Peptidase dimerisation domain H9K57_14325 PF01546 Peptidase family M20/M25/M40 H9K57_14330 PF00311 Phosphoenolpyruvate carboxylase H9K57_14340 PF02219 Methylenetetrahydrofolate reductase H9K57_14345 PF00696 Amino acid kinase family H9K57_14345 PF00742 Homoserine dehydrogenase H9K57_14345 PF03447 Homoserine dehydrogenase, NAD binding domain H9K57_14350 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K57_14355 PF01340 Met Apo-repressor, MetJ H9K57_14360 PF03949 Malic enzyme, NAD binding domain H9K57_14360 PF00390 Malic enzyme, N-terminal domain H9K57_14365 PF00210 Ferritin-like domain H9K57_14370 PF04324 BFD-like [2Fe-2S] binding domain H9K57_14375 PF03143 Elongation factor Tu C-terminal domain H9K57_14375 PF00009 Elongation factor Tu GTP binding domain H9K57_14375 PF03144 Elongation factor Tu domain 2 H9K57_14380 PF03764 Elongation factor G, domain IV H9K57_14380 PF14492 Elongation Factor G, domain II H9K57_14380 PF00009 Elongation factor Tu GTP binding domain H9K57_14380 PF00679 Elongation factor G C-terminus H9K57_14380 PF03144 Elongation factor Tu domain 2 H9K57_14385 PF00177 Ribosomal protein S7p/S5e H9K57_14390 PF00164 Ribosomal protein S12/S23 H9K57_14395 PF04077 DsrH like protein H9K57_14400 PF02635 DsrE/DsrF-like family H9K57_14405 PF02635 DsrE/DsrF-like family H9K57_14410 PF13309 HTH domain H9K57_14410 PF08348 YheO-like PAS domain H9K57_14415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_14415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K57_14425 PF04102 SlyX H9K57_14430 PF01112 Asparaginase H9K57_14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_14445 PF00999 Sodium/hydrogen exchanger family H9K57_14445 PF02254 TrkA-N domain H9K57_14450 PF02525 Flavodoxin-like fold H9K57_14455 PF00005 ABC transporter H9K57_14455 PF12848 ABC transporter H9K57_14465 PF00561 alpha/beta hydrolase fold H9K57_14470 PF06794 Uncharacterised protein family (UPF0270) H9K57_14475 PF00485 Phosphoribulokinase / Uridine kinase family H9K57_14480 PF13545 Crp-like helix-turn-helix domain H9K57_14480 PF00027 Cyclic nucleotide-binding domain H9K57_14490 PF00171 Aldehyde dehydrogenase family H9K57_14495 PF04958 Arginine N-succinyltransferase beta subunit H9K57_14500 PF00202 Aminotransferase class-III H9K57_14505 PF00117 Glutamine amidotransferase class-I H9K57_14520 PF00579 tRNA synthetases class I (W and Y) H9K57_14525 PF13419 Haloacid dehalogenase-like hydrolase H9K57_14530 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K57_14530 PF00588 SpoU rRNA Methylase family H9K57_14535 PF00575 S1 RNA binding domain H9K57_14535 PF00773 RNB domain H9K57_14535 PF08206 Ribonuclease B OB domain H9K57_14535 PF08461 Ribonuclease R winged-helix domain H9K57_14535 PF17876 Cold shock domain H9K57_14540 PF02082 Transcriptional regulator H9K57_14545 PF00175 Oxidoreductase NAD-binding domain H9K57_14545 PF00970 Oxidoreductase FAD-binding domain H9K57_14545 PF00042 Globin H9K57_14550 PF08238 Sel1 repeat H9K57_14555 PF00709 Adenylosuccinate synthetase H9K57_14560 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) H9K57_14565 PF01145 SPFH domain / Band 7 family H9K57_14570 PF01145 SPFH domain / Band 7 family H9K57_14570 PF12221 Bacterial membrane protein N terminal H9K57_14575 PF16360 GTP-binding GTPase Middle Region H9K57_14575 PF13167 GTP-binding GTPase N-terminal H9K57_14575 PF01926 50S ribosome-binding GTPase H9K57_14580 PF17209 Hfq protein H9K57_14590 PF01119 DNA mismatch repair protein, C-terminal domain H9K57_14590 PF08676 MutL C terminal dimerisation domain H9K57_14595 PF01520 N-acetylmuramoyl-L-alanine amidase H9K57_14600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H9K57_14605 PF08331 Domain of unknown function (DUF1730) H9K57_14675 PF00929 Exonuclease H9K57_14680 PF03193 RsgA GTPase H9K57_14685 PF02666 Phosphatidylserine decarboxylase H9K57_14690 PF00939 Sodium:sulfate symporter transmembrane region H9K57_14695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_14695 PF00672 HAMP domain H9K57_14705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H9K57_14705 PF01676 Metalloenzyme superfamily H9K57_14710 PF00581 Rhodanese-like domain H9K57_14715 PF02556 Preprotein translocase subunit SecB H9K57_14720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H9K57_14720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H9K57_14725 PF00132 Bacterial transferase hexapeptide (six repeats) H9K57_14725 PF06426 Serine acetyltransferase, N-terminal H9K57_14730 PF01551 Peptidase family M23 H9K57_14740 PF08360 QacR-like protein, C-terminal region H9K57_14740 PF00440 Bacterial regulatory proteins, tetR family H9K57_14750 PF00152 tRNA synthetases class II (D, K and N) H9K57_14755 PF02910 Fumarate reductase flavoprotein C-term H9K57_14755 PF00890 FAD binding domain H9K57_14760 PF13183 4Fe-4S dicluster domain H9K57_14760 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K57_14765 PF02300 Fumarate reductase subunit C H9K57_14770 PF02313 Fumarate reductase subunit D H9K57_14780 PF08207 Elongation factor P (EF-P) KOW-like domain H9K57_14780 PF09285 Elongation factor P, C-terminal H9K57_14780 PF01132 Elongation factor P (EF-P) OB domain H9K57_14785 PF04055 Radical SAM superfamily H9K57_14790 PF01168 Alanine racemase, N-terminal domain H9K57_14790 PF00842 Alanine racemase, C-terminal domain H9K57_14795 PF02308 MgtC family H9K57_14805 PF00118 TCP-1/cpn60 chaperonin family H9K57_14810 PF00166 Chaperonin 10 Kd subunit H9K57_14815 PF01554 MatE H9K57_14820 PF00365 Phosphofructokinase H9K57_14825 PF01545 Cation efflux family H9K57_14825 PF16916 Dimerisation domain of Zinc Transporter H9K57_14830 PF07813 LTXXQ motif family protein H9K57_14835 PF00072 Response regulator receiver domain H9K57_14835 PF00486 Transcriptional regulatory protein, C terminal H9K57_14840 PF16527 Two-component sensor protein CpxA, periplasmic domain H9K57_14840 PF00672 HAMP domain H9K57_14840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_14840 PF00512 His Kinase A (phospho-acceptor) domain H9K57_14845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K57_14845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K57_14850 PF00588 SpoU rRNA Methylase family H9K57_14855 PF04186 FxsA cytoplasmic membrane protein H9K57_14860 PF00206 Lyase H9K57_14860 PF10415 Fumarase C C-terminus H9K57_14865 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K57_14870 PF11412 Disulphide bond corrector protein DsbC H9K57_14870 PF02683 Cytochrome C biogenesis protein transmembrane region H9K57_14875 PF00196 Bacterial regulatory proteins, luxR family H9K57_14875 PF00072 Response regulator receiver domain H9K57_14880 PF00999 Sodium/hydrogen exchanger family H9K57_14880 PF02080 TrkA-C domain H9K57_14880 PF03471 Transporter associated domain H9K57_14890 PF00474 Sodium:solute symporter family H9K57_14905 PF00206 Lyase H9K57_14905 PF10415 Fumarase C C-terminus H9K57_14910 PF00072 Response regulator receiver domain H9K57_14910 PF00512 His Kinase A (phospho-acceptor) domain H9K57_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_14910 PF01627 Hpt domain H9K57_14910 PF00672 HAMP domain H9K57_14915 PF12832 MFS_1 like family H9K57_14930 PF16177 Acetyl-coenzyme A synthetase N-terminus H9K57_14930 PF00501 AMP-binding enzyme H9K57_14930 PF13193 AMP-binding enzyme C-terminal domain H9K57_14935 PF01220 Dehydroquinase class II H9K57_14940 PF00364 Biotin-requiring enzyme H9K57_14945 PF02785 Biotin carboxylase C-terminal domain H9K57_14945 PF00289 Biotin carboxylase, N-terminal domain H9K57_14945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K57_14955 PF01207 Dihydrouridine synthase (Dus) H9K57_14960 PF02954 Bacterial regulatory protein, Fis family H9K57_14965 PF07690 Major Facilitator Superfamily H9K57_14970 PF00005 ABC transporter H9K57_14970 PF12848 ABC transporter H9K57_14975 PF00990 Diguanylate cyclase, GGDEF domain H9K57_14975 PF05230 MASE2 domain H9K57_14995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K57_14995 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K57_14995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K57_15000 PF13520 Amino acid permease H9K57_15010 PF18500 CadC C-terminal domain 1 H9K57_15010 PF00486 Transcriptional regulatory protein, C terminal H9K57_15015 PF13411 MerR HTH family regulatory protein H9K57_15020 PF02142 MGS-like domain H9K57_15020 PF01808 AICARFT/IMPCHase bienzyme H9K57_15025 PF02843 Phosphoribosylglycinamide synthetase, C domain H9K57_15025 PF02844 Phosphoribosylglycinamide synthetase, N domain H9K57_15025 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H9K57_15035 PF00216 Bacterial DNA-binding protein H9K57_15040 PF00571 CBS domain H9K57_15040 PF01595 Cyclin M transmembrane N-terminal domain H9K57_15045 PF04222 Protein of unknown function (DUF416) H9K57_15050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K57_15055 PF03167 Uracil DNA glycosylase superfamily H9K57_15060 PF01208 Uroporphyrinogen decarboxylase (URO-D) H9K57_15075 PF00293 NUDIX domain H9K57_15075 PF09297 NADH pyrophosphatase zinc ribbon domain H9K57_15080 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H9K57_15085 PF04998 RNA polymerase Rpb1, domain 5 H9K57_15085 PF05000 RNA polymerase Rpb1, domain 4 H9K57_15085 PF04983 RNA polymerase Rpb1, domain 3 H9K57_15085 PF00623 RNA polymerase Rpb1, domain 2 H9K57_15085 PF04997 RNA polymerase Rpb1, domain 1 H9K57_15090 PF04563 RNA polymerase beta subunit H9K57_15090 PF04561 RNA polymerase Rpb2, domain 2 H9K57_15090 PF04565 RNA polymerase Rpb2, domain 3 H9K57_15090 PF10385 RNA polymerase beta subunit external 1 domain H9K57_15090 PF00562 RNA polymerase Rpb2, domain 6 H9K57_15090 PF04560 RNA polymerase Rpb2, domain 7 H9K57_15095 PF16320 Ribosomal protein L7/L12 dimerisation domain H9K57_15095 PF00542 Ribosomal protein L7/L12 C-terminal domain H9K57_15100 PF00466 Ribosomal protein L10 H9K57_15105 PF00687 Ribosomal protein L1p/L10e family H9K57_15110 PF00298 Ribosomal protein L11, RNA binding domain H9K57_15110 PF03946 Ribosomal protein L11, N-terminal domain H9K57_15115 PF00467 KOW motif H9K57_15115 PF02357 Transcription termination factor nusG H9K57_15120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H9K57_15150 PF00485 Phosphoribulokinase / Uridine kinase family H9K57_15155 PF08279 HTH domain H9K57_15155 PF03099 Biotin/lipoate A/B protein ligase family H9K57_15155 PF02237 Biotin protein ligase C terminal domain H9K57_15160 PF01565 FAD binding domain H9K57_15160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H9K57_15170 PF13091 PLD-like domain H9K57_15195 PF01177 Asp/Glu/Hydantoin racemase H9K57_15205 PF07715 TonB-dependent Receptor Plug Domain H9K57_15205 PF00593 TonB dependent receptor H9K57_15210 PF05958 tRNA (Uracil-5-)-methyltransferase H9K57_15220 PF00440 Bacterial regulatory proteins, tetR family H9K57_15225 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_15225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K57_15230 PF01554 MatE H9K57_15235 PF04072 Leucine carboxyl methyltransferase H9K57_15240 PF00717 Peptidase S24-like H9K57_15240 PF01726 LexA DNA binding domain H9K57_15245 PF01553 Acyltransferase H9K57_15250 PF01040 UbiA prenyltransferase family H9K57_15255 PF04345 Chorismate lyase H9K57_15260 PF03748 Flagellar basal body-associated protein FliL H9K57_15265 PF01694 Rhomboid family H9K57_15265 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease H9K57_15270 PF00581 Rhodanese-like domain H9K57_15275 PF00140 Sigma-70 factor, region 1.2 H9K57_15275 PF04542 Sigma-70 region 2 H9K57_15275 PF04545 Sigma-70, region 4 H9K57_15280 PF18075 FtsX extracellular domain H9K57_15285 PF00005 ABC transporter H9K57_15290 PF00448 SRP54-type protein, GTPase domain H9K57_15290 PF02881 SRP54-type protein, helical bundle domain H9K57_15305 PF01914 MarC family integral membrane protein H9K57_15350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K57_15350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K57_15355 PF01022 Bacterial regulatory protein, arsR family H9K57_15360 PF00563 EAL domain H9K57_15360 PF08668 HDOD domain H9K57_15365 PF01810 LysE type translocator H9K57_15370 PF12146 Serine aminopeptidase, S33 H9K57_15390 PF03942 DTW domain H9K57_15395 PF10442 FIST C domain H9K57_15395 PF00990 Diguanylate cyclase, GGDEF domain H9K57_15395 PF00563 EAL domain H9K57_15395 PF08495 FIST N domain H9K57_15400 PF13419 Haloacid dehalogenase-like hydrolase H9K57_15405 PF02899 Phage integrase, N-terminal SAM-like domain H9K57_15405 PF00589 Phage integrase family H9K57_15415 PF01678 Diaminopimelate epimerase H9K57_15420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K57_15420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K57_15430 PF01491 Frataxin-like domain H9K57_15435 PF12633 Adenylate cyclase NT domain H9K57_15435 PF01295 Adenylate cyclase, class-I H9K57_15440 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H9K57_15440 PF03900 Porphobilinogen deaminase, C-terminal domain H9K57_15445 PF02602 Uroporphyrinogen-III synthase HemD H9K57_15450 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase H9K57_15455 PF07219 HemY protein N-terminus H9K57_15475 PF00175 Oxidoreductase NAD-binding domain H9K57_15480 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_15485 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H9K57_15495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K57_15495 PF07498 Rho termination factor, N-terminal domain H9K57_15495 PF07497 Rho termination factor, RNA-binding domain H9K57_15500 PF00085 Thioredoxin H9K57_15505 PF00270 DEAD/DEAH box helicase H9K57_15505 PF00271 Helicase conserved C-terminal domain H9K57_15510 PF02541 Ppx/GppA phosphatase family H9K57_15515 PF02592 Putative vitamin uptake transporter H9K57_15525 PF00271 Helicase conserved C-terminal domain H9K57_15525 PF00270 DEAD/DEAH box helicase H9K57_15525 PF00570 HRDC domain H9K57_15525 PF16124 RecQ zinc-binding H9K57_15525 PF09382 RQC domain H9K57_15530 PF00892 EamA-like transporter family H9K57_15540 PF01810 LysE type translocator H9K57_15550 PF00580 UvrD/REP helicase N-terminal domain H9K57_15550 PF13361 UvrD-like helicase C-terminal domain H9K57_15560 PF05114 Protein of unknown function (DUF692) H9K57_15580 PF07690 Major Facilitator Superfamily H9K57_15585 PF03466 LysR substrate binding domain H9K57_15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_15590 PF01321 Creatinase/Prolidase N-terminal domain H9K57_15590 PF00557 Metallopeptidase family M24 H9K57_15590 PF01321 Creatinase/Prolidase N-terminal domain H9K57_15590 PF00557 Metallopeptidase family M24 H9K57_15595 PF06968 Biotin and Thiamin Synthesis associated domain H9K57_15595 PF04055 Radical SAM superfamily H9K57_15600 PF05690 Thiazole biosynthesis protein ThiG H9K57_15605 PF02597 ThiS family H9K57_15610 PF00899 ThiF family H9K57_15615 PF02581 Thiamine monophosphate synthase H9K57_15620 PF01964 Radical SAM ThiC family H9K57_15620 PF13667 ThiC-associated domain H9K57_15625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H9K57_15650 PF00005 ABC transporter H9K57_15650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_15655 PF00005 ABC transporter H9K57_15655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_15665 PF08719 Domain of unknown function (DUF1768) H9K57_15665 PF00925 GTP cyclohydrolase II H9K57_15675 PF00072 Response regulator receiver domain H9K57_15675 PF01627 Hpt domain H9K57_15675 PF00512 His Kinase A (phospho-acceptor) domain H9K57_15675 PF17149 Periplasmic sensor domain found in signal transduction proteins H9K57_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_15675 PF00672 HAMP domain H9K57_15685 PF01709 Transcriptional regulator H9K57_15690 PF01098 Cell cycle protein H9K57_15700 PF00005 ABC transporter H9K57_15720 PF07694 5TMR of 5TMR-LYT H9K57_15720 PF13492 GAF domain H9K57_15720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_15720 PF06580 Histidine kinase H9K57_15725 PF04397 LytTr DNA-binding domain H9K57_15725 PF00072 Response regulator receiver domain H9K57_15735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K57_15740 PF17200 Single Cache domain 2 H9K57_15740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_15740 PF00672 HAMP domain H9K57_15750 PF00132 Bacterial transferase hexapeptide (six repeats) H9K57_15755 PF03616 Sodium/glutamate symporter H9K57_15765 PF00005 ABC transporter H9K57_15770 PF00392 Bacterial regulatory proteins, gntR family H9K57_15770 PF00155 Aminotransferase class I and II H9K57_15775 PF03616 Sodium/glutamate symporter H9K57_15785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9K57_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_15800 PF03466 LysR substrate binding domain H9K57_15805 PF02678 Pirin H9K57_15805 PF17954 Quercetinase C-terminal cupin domain H9K57_15810 PF07681 DoxX H9K57_15820 PF06029 AlkA N-terminal domain H9K57_15820 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K57_15825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K57_15825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9K57_15835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K57_15845 PF03600 Citrate transporter H9K57_15865 PF00704 Glycosyl hydrolases family 18 H9K57_15865 PF08329 Chitinase A, N-terminal domain H9K57_15875 PF06865 Pyrimidine/purine nucleoside phosphorylase H9K57_15885 PF00563 EAL domain H9K57_15885 PF00990 Diguanylate cyclase, GGDEF domain H9K57_15890 PF01554 MatE H9K57_15895 PF00849 RNA pseudouridylate synthase H9K57_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_15910 PF03466 LysR substrate binding domain H9K57_15925 PF17152 Periplasmic sensor domain H9K57_15925 PF00990 Diguanylate cyclase, GGDEF domain H9K57_15935 PF00756 Putative esterase H9K57_15940 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_15940 PF00107 Zinc-binding dehydrogenase H9K57_15945 PF00797 N-acetyltransferase H9K57_15950 PF03466 LysR substrate binding domain H9K57_15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_15965 PF09339 IclR helix-turn-helix domain H9K57_15965 PF01614 Bacterial transcriptional regulator H9K57_15975 PF10688 Bacterial inner membrane protein H9K57_15980 PF07883 Cupin domain H9K57_15995 PF00294 pfkB family carbohydrate kinase H9K57_16000 PF01081 KDPG and KHG aldolase H9K57_16015 PF13229 Right handed beta helix region H9K57_16020 PF00474 Sodium:solute symporter family H9K57_16025 PF14583 Oligogalacturonate lyase H9K57_16030 PF08021 Siderophore-interacting FAD-binding domain H9K57_16030 PF04954 Siderophore-interacting protein H9K57_16035 PF01810 LysE type translocator H9K57_16040 PF01037 Lrp/AsnC ligand binding domain H9K57_16045 PF18416 N-acetylglucosamine binding protein domain 2 H9K57_16045 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K57_16060 PF13599 Pentapeptide repeats (9 copies) H9K57_16065 PF03922 OmpW family H9K57_16070 PF13533 Biotin-lipoyl like H9K57_16075 PF07690 Major Facilitator Superfamily H9K57_16085 PF12706 Beta-lactamase superfamily domain H9K57_16095 PF01204 Trehalase H9K57_16100 PF01661 Macro domain H9K57_16105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16110 PF03466 LysR substrate binding domain H9K57_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16120 PF03466 LysR substrate binding domain H9K57_16135 PF13419 Haloacid dehalogenase-like hydrolase H9K57_16160 PF17853 GGDEF-like domain H9K57_16160 PF05651 Putative sugar diacid recognition H9K57_16160 PF13556 PucR C-terminal helix-turn-helix domain H9K57_16165 PF02447 GntP family permease H9K57_16170 PF02595 Glycerate kinase family H9K57_16175 PF00155 Aminotransferase class I and II H9K57_16175 PF00392 Bacterial regulatory proteins, gntR family H9K57_16195 PF00583 Acetyltransferase (GNAT) family H9K57_16220 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K57_16225 PF00384 Molybdopterin oxidoreductase H9K57_16225 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K57_16225 PF01568 Molydopterin dinucleotide binding domain H9K57_16235 PF02581 Thiamine monophosphate synthase H9K57_16240 PF02110 Hydroxyethylthiazole kinase family H9K57_16245 PF03070 TENA/THI-4/PQQC family H9K57_16250 PF09084 NMT1/THI5 like H9K57_16255 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_16260 PF00005 ABC transporter H9K57_16265 PF08543 Phosphomethylpyrimidine kinase H9K57_16270 PF01523 Putative modulator of DNA gyrase H9K57_16275 PF01523 Putative modulator of DNA gyrase H9K57_16280 PF04013 Putative SAM-dependent RNA methyltransferase H9K57_16330 PF10928 Protein of unknown function (DUF2810) H9K57_16335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K57_16335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K57_16345 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K57_16350 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K57_16350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K57_16355 PF00486 Transcriptional regulatory protein, C terminal H9K57_16355 PF00072 Response regulator receiver domain H9K57_16360 PF00672 HAMP domain H9K57_16360 PF16750 Sensor domain of 2-component histidine kinase H9K57_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_16360 PF00512 His Kinase A (phospho-acceptor) domain H9K57_16365 PF00593 TonB dependent receptor H9K57_16365 PF07715 TonB-dependent Receptor Plug Domain H9K57_16375 PF01618 MotA/TolQ/ExbB proton channel family H9K57_16380 PF01618 MotA/TolQ/ExbB proton channel family H9K57_16385 PF02472 Biopolymer transport protein ExbD/TolR H9K57_16430 PF00005 ABC transporter H9K57_16435 PF00950 ABC 3 transport family H9K57_16450 PF00326 Prolyl oligopeptidase family H9K57_16450 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K57_16455 PF07690 Major Facilitator Superfamily H9K57_16460 PF00491 Arginase family H9K57_16465 PF17944 Arginine decarboxylase C-terminal helical extension H9K57_16465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K57_16465 PF17810 Arginine decarboxylase helical bundle domain H9K57_16470 PF00753 Metallo-beta-lactamase superfamily H9K57_16475 PF18030 RimK PreATP-grasp domain H9K57_16475 PF08443 RimK-like ATP-grasp domain H9K57_16480 PF08443 RimK-like ATP-grasp domain H9K57_16480 PF18030 RimK PreATP-grasp domain H9K57_16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16485 PF03466 LysR substrate binding domain H9K57_16510 PF00232 Glycosyl hydrolase family 1 H9K57_16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_16515 PF00512 His Kinase A (phospho-acceptor) domain H9K57_16515 PF02743 Cache domain H9K57_16520 PF00072 Response regulator receiver domain H9K57_16520 PF02954 Bacterial regulatory protein, Fis family H9K57_16520 PF00158 Sigma-54 interaction domain H9K57_16525 PF00990 Diguanylate cyclase, GGDEF domain H9K57_16525 PF08448 PAS fold H9K57_16530 PF05525 Branched-chain amino acid transport protein H9K57_16545 PF01266 FAD dependent oxidoreductase H9K57_16555 PF01212 Beta-eliminating lyase H9K57_16570 PF07670 Nucleoside recognition H9K57_16570 PF07662 Na+ dependent nucleoside transporter C-terminus H9K57_16570 PF01773 Na+ dependent nucleoside transporter N-terminus H9K57_16580 PF13532 2OG-Fe(II) oxygenase superfamily H9K57_16585 PF05230 MASE2 domain H9K57_16585 PF00990 Diguanylate cyclase, GGDEF domain H9K57_16590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_16590 PF00672 HAMP domain H9K57_16590 PF12729 Four helix bundle sensory module for signal transduction H9K57_16605 PF00990 Diguanylate cyclase, GGDEF domain H9K57_16610 PF00875 DNA photolyase H9K57_16610 PF03441 FAD binding domain of DNA photolyase H9K57_16615 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H9K57_16620 PF04055 Radical SAM superfamily H9K57_16620 PF00919 Uncharacterized protein family UPF0004 H9K57_16625 PF01625 Peptide methionine sulfoxide reductase H9K57_16625 PF01641 SelR domain H9K57_16630 PF02566 OsmC-like protein H9K57_16635 PF14602 Hexapeptide repeat of succinyl-transferase H9K57_16635 PF12464 Maltose acetyltransferase H9K57_16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16670 PF03466 LysR substrate binding domain H9K57_16675 PF13419 Haloacid dehalogenase-like hydrolase H9K57_16690 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K57_16695 PF00194 Eukaryotic-type carbonic anhydrase H9K57_16700 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K57_16705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_16710 PF02687 FtsX-like permease family H9K57_16710 PF12704 MacB-like periplasmic core domain H9K57_16710 PF00005 ABC transporter H9K57_16715 PF02321 Outer membrane efflux protein H9K57_16720 PF00657 GDSL-like Lipase/Acylhydrolase H9K57_16725 PF05922 Peptidase inhibitor I9 H9K57_16725 PF00082 Subtilase family H9K57_16735 PF03611 PTS system sugar-specific permease component H9K57_16745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_16750 PF00356 Bacterial regulatory proteins, lacI family H9K57_16755 PF13419 Haloacid dehalogenase-like hydrolase H9K57_16760 PF00202 Aminotransferase class-III H9K57_16765 PF00266 Aminotransferase class-V H9K57_16780 PF00005 ABC transporter H9K57_16785 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_16790 PF00392 Bacterial regulatory proteins, gntR family H9K57_16790 PF07702 UTRA domain H9K57_16805 PF04393 Protein of unknown function (DUF535) H9K57_16815 PF01266 FAD dependent oxidoreductase H9K57_16820 PF18027 Cytosolic carboxypeptidase N-terminal domain H9K57_16820 PF00246 Zinc carboxypeptidase H9K57_16825 PF00691 OmpA family H9K57_16825 PF01389 OmpA-like transmembrane domain H9K57_16830 PF03466 LysR substrate binding domain H9K57_16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_16840 PF03466 LysR substrate binding domain H9K57_16850 PF00854 POT family H9K57_16855 PF03313 Serine dehydratase alpha chain H9K57_16855 PF03315 Serine dehydratase beta chain H9K57_16875 PF08264 Anticodon-binding domain of tRNA H9K57_16875 PF00133 tRNA synthetases class I (I, L, M and V) H9K57_16900 PF00460 Flagella basal body rod protein H9K57_16905 PF00460 Flagella basal body rod protein H9K57_16905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_16910 PF03963 Flagellar hook capping protein - N-terminal region H9K57_16910 PF13860 FlgD Ig-like domain H9K57_16910 PF13861 FlgD Tudor-like domain H9K57_16915 PF00460 Flagella basal body rod protein H9K57_16915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_16915 PF07559 Flagellar basal body protein FlaE H9K57_16920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_16920 PF00460 Flagella basal body rod protein H9K57_16925 PF00460 Flagella basal body rod protein H9K57_16925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_16930 PF02107 Flagellar L-ring protein H9K57_16935 PF02119 Flagellar P-ring protein H9K57_16940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K57_16940 PF10135 Rod binding protein H9K57_16945 PF00460 Flagella basal body rod protein H9K57_16945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K57_16950 PF00669 Bacterial flagellin N-terminal helical region H9K57_16970 PF01070 FMN-dependent dehydrogenase H9K57_16995 PF00581 Rhodanese-like domain H9K57_17000 PF00166 Chaperonin 10 Kd subunit H9K57_17005 PF00118 TCP-1/cpn60 chaperonin family H9K57_17020 PF01810 LysE type translocator H9K57_17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17025 PF03466 LysR substrate binding domain H9K57_17035 PF08359 YsiA-like protein, C-terminal region H9K57_17035 PF00440 Bacterial regulatory proteins, tetR family H9K57_17045 PF02872 5'-nucleotidase, C-terminal domain H9K57_17045 PF00149 Calcineurin-like phosphoesterase H9K57_17050 PF03060 Nitronate monooxygenase H9K57_17065 PF03466 LysR substrate binding domain H9K57_17065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17075 PF01625 Peptide methionine sulfoxide reductase H9K57_17075 PF01641 SelR domain H9K57_17080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_17085 PF00455 DeoR C terminal sensor domain H9K57_17085 PF08220 DeoR-like helix-turn-helix domain H9K57_17095 PF00199 Catalase H9K57_17095 PF06628 Catalase-related immune-responsive H9K57_17105 PF00857 Isochorismatase family H9K57_17115 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H9K57_17115 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H9K57_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17140 PF03466 LysR substrate binding domain H9K57_17145 PF01389 OmpA-like transmembrane domain H9K57_17145 PF00691 OmpA family H9K57_17155 PF06629 MltA-interacting protein MipA H9K57_17160 PF17185 NlpE C-terminal OB domain H9K57_17160 PF04170 NlpE N-terminal domain H9K57_17165 PF02001 Protein of unknown function DUF134 H9K57_17190 PF03144 Elongation factor Tu domain 2 H9K57_17190 PF00009 Elongation factor Tu GTP binding domain H9K57_17190 PF03764 Elongation factor G, domain IV H9K57_17190 PF00679 Elongation factor G C-terminus H9K57_17190 PF14492 Elongation Factor G, domain II H9K57_17195 PF13378 Enolase C-terminal domain-like H9K57_17195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H9K57_17205 PF03466 LysR substrate binding domain H9K57_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17215 PF09278 MerR, DNA binding H9K57_17215 PF00376 MerR family regulatory protein H9K57_17240 PF13091 PLD-like domain H9K57_17245 PF13533 Biotin-lipoyl like H9K57_17250 PF00873 AcrB/AcrD/AcrF family H9K57_17275 PF00005 ABC transporter H9K57_17275 PF08402 TOBE domain H9K57_17300 PF07702 UTRA domain H9K57_17300 PF00392 Bacterial regulatory proteins, gntR family H9K57_17305 PF02028 BCCT, betaine/carnitine/choline family transporter H9K57_17310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K57_17310 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H9K57_17310 PF00703 Glycosyl hydrolases family 2 H9K57_17310 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K57_17315 PF00196 Bacterial regulatory proteins, luxR family H9K57_17325 PF07694 5TMR of 5TMR-LYT H9K57_17325 PF00990 Diguanylate cyclase, GGDEF domain H9K57_17340 PF00873 AcrB/AcrD/AcrF family H9K57_17345 PF13533 Biotin-lipoyl like H9K57_17350 PF03466 LysR substrate binding domain H9K57_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17360 PF13416 Bacterial extracellular solute-binding protein H9K57_17365 PF00579 tRNA synthetases class I (W and Y) H9K57_17380 PF02896 PEP-utilising enzyme, TIM barrel domain H9K57_17380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H9K57_17380 PF00391 PEP-utilising enzyme, mobile domain H9K57_17385 PF03618 Kinase/pyrophosphorylase H9K57_17390 PF00710 Asparaginase, N-terminal H9K57_17390 PF17763 Glutaminase/Asparaginase C-terminal domain H9K57_17395 PF00709 Adenylosuccinate synthetase H9K57_17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17400 PF03466 LysR substrate binding domain H9K57_17415 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H9K57_17420 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9K57_17420 PF12833 Helix-turn-helix domain H9K57_17435 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_17435 PF00107 Zinc-binding dehydrogenase H9K57_17440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K57_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17450 PF03466 LysR substrate binding domain H9K57_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17455 PF03466 LysR substrate binding domain H9K57_17465 PF00271 Helicase conserved C-terminal domain H9K57_17465 PF00270 DEAD/DEAH box helicase H9K57_17480 PF00535 Glycosyl transferase family 2 H9K57_17505 PF00155 Aminotransferase class I and II H9K57_17510 PF12833 Helix-turn-helix domain H9K57_17510 PF01497 Periplasmic binding protein H9K57_17540 PF05661 Protein of unknown function (DUF808) H9K57_17545 PF01979 Amidohydrolase family H9K57_17550 PF01679 Proteolipid membrane potential modulator H9K57_17555 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_17555 PF03473 MOSC domain H9K57_17555 PF03476 MOSC N-terminal beta barrel domain H9K57_17555 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K57_17555 PF03476 MOSC N-terminal beta barrel domain H9K57_17555 PF03473 MOSC domain H9K57_17560 PF02540 NAD synthase H9K57_17565 PF01467 Cytidylyltransferase-like H9K57_17605 PF00005 ABC transporter H9K57_17610 PF01032 FecCD transport family H9K57_17620 PF02472 Biopolymer transport protein ExbD/TolR H9K57_17625 PF01618 MotA/TolQ/ExbB proton channel family H9K57_17630 PF03544 Gram-negative bacterial TonB protein C-terminal H9K57_17635 PF04055 Radical SAM superfamily H9K57_17640 PF06228 Haem utilisation ChuX/HutX H9K57_17645 PF01243 Pyridoxamine 5'-phosphate oxidase H9K57_17655 PF00072 Response regulator receiver domain H9K57_17655 PF01584 CheW-like domain H9K57_17670 PF03466 LysR substrate binding domain H9K57_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17675 PF07690 Major Facilitator Superfamily H9K57_17690 PF00082 Subtilase family H9K57_17710 PF00141 Peroxidase H9K57_17715 PF00210 Ferritin-like domain H9K57_17720 PF03466 LysR substrate binding domain H9K57_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_17740 PF08453 Peptidase family M9 N-terminal H9K57_17740 PF01752 Collagenase H9K57_17740 PF04151 Bacterial pre-peptidase C-terminal domain H9K57_17750 PF00128 Alpha amylase, catalytic domain H9K57_17765 PF00999 Sodium/hydrogen exchanger family H9K57_17765 PF02254 TrkA-N domain H9K57_17770 PF02525 Flavodoxin-like fold H9K57_17775 PF00582 Universal stress protein family H9K57_17780 PF00005 ABC transporter H9K57_17780 PF16326 ABC transporter C-terminal domain H9K57_17780 PF12848 ABC transporter H9K57_17785 PF00326 Prolyl oligopeptidase family H9K57_17785 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K57_17795 PF13533 Biotin-lipoyl like H9K57_17800 PF00873 AcrB/AcrD/AcrF family H9K57_17805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K57_17815 PF13302 Acetyltransferase (GNAT) domain H9K57_17825 PF00990 Diguanylate cyclase, GGDEF domain H9K57_17845 PF00873 AcrB/AcrD/AcrF family H9K57_17865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H9K57_17865 PF01568 Molydopterin dinucleotide binding domain H9K57_17865 PF12838 4Fe-4S dicluster domain H9K57_17865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_17865 PF00384 Molybdopterin oxidoreductase H9K57_17885 PF00005 ABC transporter H9K57_17895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_17895 PF00672 HAMP domain H9K57_17900 PF10282 Lactonase, 7-bladed beta-propeller H9K57_17905 PF02567 Phenazine biosynthesis-like protein H9K57_17910 PF01161 Phosphatidylethanolamine-binding protein H9K57_17920 PF01758 Sodium Bile acid symporter family H9K57_17935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_17940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_17940 PF02378 Phosphotransferase system, EIIC H9K57_17945 PF00107 Zinc-binding dehydrogenase H9K57_17945 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_17980 PF03222 Tryptophan/tyrosine permease family H9K57_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_17990 PF00672 HAMP domain H9K57_17990 PF02743 Cache domain H9K57_17995 PF07670 Nucleoside recognition H9K57_18015 PF01476 LysM domain H9K57_18015 PF08525 Opacity-associated protein A N-terminal motif H9K57_18015 PF01551 Peptidase family M23 H9K57_18020 PF08448 PAS fold H9K57_18020 PF08447 PAS fold H9K57_18020 PF00563 EAL domain H9K57_18020 PF00990 Diguanylate cyclase, GGDEF domain H9K57_18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18025 PF03466 LysR substrate binding domain H9K57_18030 PF07690 Major Facilitator Superfamily H9K57_18040 PF00462 Glutaredoxin H9K57_18045 PF00892 EamA-like transporter family H9K57_18050 PF00267 Gram-negative porin H9K57_18060 PF01557 Fumarylacetoacetate (FAA) hydrolase family H9K57_18075 PF12833 Helix-turn-helix domain H9K57_18080 PF01810 LysE type translocator H9K57_18090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K57_18090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K57_18090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K57_18090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K57_18095 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H9K57_18095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K57_18100 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K57_18105 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H9K57_18110 PF00510 Cytochrome c oxidase subunit III H9K57_18130 PF02628 Cytochrome oxidase assembly protein H9K57_18135 PF01040 UbiA prenyltransferase family H9K57_18140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K57_18140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K57_18170 PF00313 'Cold-shock' DNA-binding domain H9K57_18175 PF03889 Alternative ribosome-rescue factor A H9K57_18180 PF08447 PAS fold H9K57_18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_18180 PF13426 PAS domain H9K57_18185 PF00990 Diguanylate cyclase, GGDEF domain H9K57_18200 PF12704 MacB-like periplasmic core domain H9K57_18200 PF02687 FtsX-like permease family H9K57_18200 PF00005 ABC transporter H9K57_18205 PF12704 MacB-like periplasmic core domain H9K57_18205 PF02687 FtsX-like permease family H9K57_18205 PF00005 ABC transporter H9K57_18215 PF17200 Single Cache domain 2 H9K57_18215 PF00672 HAMP domain H9K57_18215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_18220 PF00210 Ferritin-like domain H9K57_18230 PF07995 Glucose / Sorbosone dehydrogenase H9K57_18235 PF00465 Iron-containing alcohol dehydrogenase H9K57_18250 PF00892 EamA-like transporter family H9K57_18275 PF03466 LysR substrate binding domain H9K57_18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18285 PF00501 AMP-binding enzyme H9K57_18285 PF13193 AMP-binding enzyme C-terminal domain H9K57_18290 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H9K57_18295 PF01329 Pterin 4 alpha carbinolamine dehydratase H9K57_18315 PF12843 Putative quorum-sensing-regulated virulence factor H9K57_18320 PF00270 DEAD/DEAH box helicase H9K57_18320 PF00271 Helicase conserved C-terminal domain H9K57_18325 PF09905 DNA-binding protein VF530 H9K57_18330 PF00291 Pyridoxal-phosphate dependent enzyme H9K57_18340 PF01470 Pyroglutamyl peptidase H9K57_18350 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9K57_18350 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9K57_18355 PF00270 DEAD/DEAH box helicase H9K57_18355 PF00271 Helicase conserved C-terminal domain H9K57_18380 PF00563 EAL domain H9K57_18380 PF12792 CSS motif domain associated with EAL H9K57_18385 PF00005 ABC transporter H9K57_18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_18390 PF00672 HAMP domain H9K57_18390 PF12729 Four helix bundle sensory module for signal transduction H9K57_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18395 PF03466 LysR substrate binding domain H9K57_18400 PF00884 Sulfatase H9K57_18405 PF13186 Iron-sulfur cluster-binding domain H9K57_18405 PF04055 Radical SAM superfamily H9K57_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18410 PF03466 LysR substrate binding domain H9K57_18435 PF07883 Cupin domain H9K57_18435 PF01381 Helix-turn-helix H9K57_18485 PF12167 Arm DNA-binding domain H9K57_18485 PF00589 Phage integrase family H9K57_18500 PF00145 C-5 cytosine-specific DNA methylase H9K57_18500 PF18284 DNA methylase N-terminal domain H9K57_18525 PF00589 Phage integrase family H9K57_18525 PF14659 Phage integrase, N-terminal SAM-like domain H9K57_18535 PF01575 MaoC like domain H9K57_18540 PF12849 PBP superfamily domain H9K57_18550 PF12833 Helix-turn-helix domain H9K57_18555 PF00575 S1 RNA binding domain H9K57_18555 PF08206 Ribonuclease B OB domain H9K57_18555 PF00773 RNB domain H9K57_18560 PF00270 DEAD/DEAH box helicase H9K57_18560 PF03880 DbpA RNA binding domain H9K57_18560 PF00271 Helicase conserved C-terminal domain H9K57_18565 PF13426 PAS domain H9K57_18565 PF00990 Diguanylate cyclase, GGDEF domain H9K57_18565 PF00563 EAL domain H9K57_18570 PF00871 Acetokinase family H9K57_18575 PF08447 PAS fold H9K57_18575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_18575 PF13426 PAS domain H9K57_18585 PF10063 Uncharacterized integral membrane protein (DUF2301) H9K57_18590 PF00682 HMGL-like H9K57_18595 PF00378 Enoyl-CoA hydratase/isomerase H9K57_18600 PF01039 Carboxyl transferase domain H9K57_18605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_18605 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_18605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_18610 PF09278 MerR, DNA binding H9K57_18610 PF00376 MerR family regulatory protein H9K57_18615 PF02803 Thiolase, C-terminal domain H9K57_18615 PF00108 Thiolase, N-terminal domain H9K57_18620 PF00171 Aldehyde dehydrogenase family H9K57_18625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_18625 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_18625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_18630 PF00378 Enoyl-CoA hydratase/isomerase H9K57_18635 PF00378 Enoyl-CoA hydratase/isomerase H9K57_18640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K57_18640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K57_18650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K57_18650 PF06481 COX Aromatic Rich Motif H9K57_18655 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K57_18660 PF00510 Cytochrome c oxidase subunit III H9K57_18670 PF01040 UbiA prenyltransferase family H9K57_18675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K57_18680 PF08031 Berberine and berberine like H9K57_18680 PF01565 FAD binding domain H9K57_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18685 PF03466 LysR substrate binding domain H9K57_18700 PF03466 LysR substrate binding domain H9K57_18700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18705 PF00005 ABC transporter H9K57_18710 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_18715 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_18720 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18730 PF03466 LysR substrate binding domain H9K57_18735 PF00043 Glutathione S-transferase, C-terminal domain H9K57_18735 PF02798 Glutathione S-transferase, N-terminal domain H9K57_18745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K57_18745 PF00364 Biotin-requiring enzyme H9K57_18745 PF02817 e3 binding domain H9K57_18750 PF02780 Transketolase, C-terminal domain H9K57_18750 PF02779 Transketolase, pyrimidine binding domain H9K57_18755 PF00676 Dehydrogenase E1 component H9K57_18770 PF00012 Hsp70 protein H9K57_18775 PF04314 Copper chaperone PCu(A)C H9K57_18795 PF01497 Periplasmic binding protein H9K57_18800 PF01032 FecCD transport family H9K57_18805 PF01032 FecCD transport family H9K57_18810 PF00005 ABC transporter H9K57_18815 PF13411 MerR HTH family regulatory protein H9K57_18820 PF12833 Helix-turn-helix domain H9K57_18825 PF07715 TonB-dependent Receptor Plug Domain H9K57_18825 PF00593 TonB dependent receptor H9K57_18855 PF12805 FUSC-like inner membrane protein yccS H9K57_18860 PF13361 UvrD-like helicase C-terminal domain H9K57_18860 PF00580 UvrD/REP helicase N-terminal domain H9K57_18860 PF12462 DNA helicase IV / RNA helicase N terminal H9K57_18865 PF02142 MGS-like domain H9K57_18870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K57_18875 PF00672 HAMP domain H9K57_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_18875 PF00512 His Kinase A (phospho-acceptor) domain H9K57_18875 PF01627 Hpt domain H9K57_18875 PF00072 Response regulator receiver domain H9K57_18890 PF00486 Transcriptional regulatory protein, C terminal H9K57_18890 PF00072 Response regulator receiver domain H9K57_18895 PF00884 Sulfatase H9K57_18895 PF16385 Domain of unknown function H9K57_18900 PF00884 Sulfatase H9K57_18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18910 PF03466 LysR substrate binding domain H9K57_18915 PF00884 Sulfatase H9K57_18920 PF04055 Radical SAM superfamily H9K57_18920 PF13186 Iron-sulfur cluster-binding domain H9K57_18925 PF07726 ATPase family associated with various cellular activities (AAA) H9K57_18925 PF17863 AAA lid domain H9K57_18955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K57_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_18960 PF03466 LysR substrate binding domain H9K57_18965 PF00781 Diacylglycerol kinase catalytic domain H9K57_18970 PF04076 Bacterial OB fold (BOF) protein H9K57_18985 PF04055 Radical SAM superfamily H9K57_18985 PF13186 Iron-sulfur cluster-binding domain H9K57_18995 PF18081 Fanconi anemia-associated nuclease SAP domain H9K57_18995 PF08774 VRR-NUC domain H9K57_19010 PF01435 Peptidase family M48 H9K57_19015 PF04011 LemA family H9K57_19020 PF03606 C4-dicarboxylate anaerobic carrier H9K57_19030 PF00583 Acetyltransferase (GNAT) family H9K57_19030 PF00814 Glycoprotease family H9K57_19040 PF00072 Response regulator receiver domain H9K57_19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_19045 PF00155 Aminotransferase class I and II H9K57_19050 PF01926 50S ribosome-binding GTPase H9K57_19060 PF01752 Collagenase H9K57_19060 PF04151 Bacterial pre-peptidase C-terminal domain H9K57_19060 PF08453 Peptidase family M9 N-terminal H9K57_19070 PF12833 Helix-turn-helix domain H9K57_19075 PF03466 LysR substrate binding domain H9K57_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19095 PF04972 BON domain H9K57_19095 PF13629 Pilus formation protein N terminal region H9K57_19095 PF00263 Bacterial type II and III secretion system protein H9K57_19110 PF00437 Type II/IV secretion system protein H9K57_19145 PF05736 OprF membrane domain H9K57_19145 PF00691 OmpA family H9K57_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19155 PF03466 LysR substrate binding domain H9K57_19160 PF03466 LysR substrate binding domain H9K57_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19170 PF00512 His Kinase A (phospho-acceptor) domain H9K57_19170 PF09456 RcsC Alpha-Beta-Loop (ABL) H9K57_19170 PF00072 Response regulator receiver domain H9K57_19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_19175 PF00563 EAL domain H9K57_19175 PF00990 Diguanylate cyclase, GGDEF domain H9K57_19175 PF13188 PAS domain H9K57_19175 PF03707 Bacterial signalling protein N terminal repeat H9K57_19180 PF00196 Bacterial regulatory proteins, luxR family H9K57_19180 PF00072 Response regulator receiver domain H9K57_19185 PF00990 Diguanylate cyclase, GGDEF domain H9K57_19195 PF00072 Response regulator receiver domain H9K57_19195 PF00196 Bacterial regulatory proteins, luxR family H9K57_19210 PF01584 CheW-like domain H9K57_19210 PF00072 Response regulator receiver domain H9K57_19225 PF00892 EamA-like transporter family H9K57_19235 PF01569 PAP2 superfamily H9K57_19245 PF02868 Thermolysin metallopeptidase, alpha-helical domain H9K57_19245 PF03413 Peptidase propeptide and YPEB domain H9K57_19245 PF07504 Fungalysin/Thermolysin Propeptide Motif H9K57_19245 PF04151 Bacterial pre-peptidase C-terminal domain H9K57_19245 PF01447 Thermolysin metallopeptidase, catalytic domain H9K57_19250 PF00893 Small Multidrug Resistance protein H9K57_19255 PF00892 EamA-like transporter family H9K57_19275 PF00171 Aldehyde dehydrogenase family H9K57_19280 PF00939 Sodium:sulfate symporter transmembrane region H9K57_19285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9K57_19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_19285 PF00989 PAS fold H9K57_19285 PF17203 Single cache domain 3 H9K57_19290 PF12431 Transcriptional regulator H9K57_19290 PF00072 Response regulator receiver domain H9K57_19300 PF01645 Conserved region in glutamate synthase H9K57_19300 PF13187 4Fe-4S dicluster domain H9K57_19305 PF00141 Peroxidase H9K57_19310 PF09722 Protein of unknown function (DUF2384) H9K57_19320 PF01757 Acyltransferase family H9K57_19330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K57_19335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_19355 PF00571 CBS domain H9K57_19355 PF01769 Divalent cation transporter H9K57_19355 PF03448 MgtE intracellular N domain H9K57_19385 PF01327 Polypeptide deformylase H9K57_19390 PF09278 MerR, DNA binding H9K57_19390 PF00376 MerR family regulatory protein H9K57_19400 PF02253 Phospholipase A1 H9K57_19420 PF00005 ABC transporter H9K57_19420 PF00664 ABC transporter transmembrane region H9K57_19430 PF00929 Exonuclease H9K57_19430 PF11490 DNA polymerase III polC-type N-terminus II H9K57_19430 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K57_19430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K57_19430 PF14579 Helix-hairpin-helix motif H9K57_19430 PF02811 PHP domain H9K57_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19435 PF03466 LysR substrate binding domain H9K57_19440 PF17848 Acetyl-coA carboxylase zinc finger domain H9K57_19440 PF01039 Carboxyl transferase domain H9K57_19465 PF12852 Cupin H9K57_19465 PF12833 Helix-turn-helix domain H9K57_19470 PF01588 Putative tRNA binding domain H9K57_19475 PF02347 Glycine cleavage system P-protein H9K57_19480 PF01597 Glycine cleavage H-protein H9K57_19485 PF00464 Serine hydroxymethyltransferase H9K57_19495 PF01571 Aminomethyltransferase folate-binding domain H9K57_19495 PF08669 Glycine cleavage T-protein C-terminal barrel domain H9K57_19505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_19515 PF00873 AcrB/AcrD/AcrF family H9K57_19525 PF02378 Phosphotransferase system, EIIC H9K57_19525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_19530 PF00294 pfkB family carbohydrate kinase H9K57_19535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_19535 PF00381 PTS HPr component phosphorylation site H9K57_19540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K57_19540 PF00356 Bacterial regulatory proteins, lacI family H9K57_19555 PF00563 EAL domain H9K57_19555 PF01590 GAF domain H9K57_19555 PF00989 PAS fold H9K57_19555 PF00990 Diguanylate cyclase, GGDEF domain H9K57_19560 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_19565 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_19570 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_19575 PF00005 ABC transporter H9K57_19580 PF00224 Pyruvate kinase, barrel domain H9K57_19580 PF02887 Pyruvate kinase, alpha/beta domain H9K57_19585 PF07690 Major Facilitator Superfamily H9K57_19595 PF00512 His Kinase A (phospho-acceptor) domain H9K57_19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_19595 PF00672 HAMP domain H9K57_19600 PF14532 Sigma-54 interaction domain H9K57_19600 PF00072 Response regulator receiver domain H9K57_19600 PF02954 Bacterial regulatory protein, Fis family H9K57_19610 PF00465 Iron-containing alcohol dehydrogenase H9K57_19615 PF12833 Helix-turn-helix domain H9K57_19615 PF06719 AraC-type transcriptional regulator N-terminus H9K57_19620 PF00704 Glycosyl hydrolases family 18 H9K57_19620 PF06483 Chitinase C H9K57_19625 PF00483 Nucleotidyl transferase H9K57_19630 PF01268 Formate--tetrahydrofolate ligase H9K57_19635 PF00294 pfkB family carbohydrate kinase H9K57_19650 PF11849 Domain of unknown function (DUF3369) H9K57_19655 PF13419 Haloacid dehalogenase-like hydrolase H9K57_19660 PF00672 HAMP domain H9K57_19660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_19665 PF04336 Acyl carrier protein phosphodiesterase H9K57_19670 PF00270 DEAD/DEAH box helicase H9K57_19670 PF00271 Helicase conserved C-terminal domain H9K57_19675 PF12792 CSS motif domain associated with EAL H9K57_19675 PF00563 EAL domain H9K57_19690 PF01292 Prokaryotic cytochrome b561 H9K57_19695 PF04264 YceI-like domain H9K57_19700 PF01226 Formate/nitrite transporter H9K57_19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19705 PF03466 LysR substrate binding domain H9K57_19710 PF06496 Protein of unknown function (DUF1097) H9K57_19715 PF11398 Protein of unknown function (DUF2813) H9K57_19720 PF00149 Calcineurin-like phosphoesterase H9K57_19720 PF02872 5'-nucleotidase, C-terminal domain H9K57_19725 PF03741 Integral membrane protein TerC family H9K57_19740 PF12262 Bacterial virulence factor lipase N-terminal H9K57_19745 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K57_19760 PF03061 Thioesterase superfamily H9K57_19770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_19770 PF12793 Sugar transport-related sRNA regulator N-term H9K57_19795 PF00684 DnaJ central domain H9K57_19795 PF01556 DnaJ C terminal domain H9K57_19795 PF00226 DnaJ domain H9K57_19805 PF13188 PAS domain H9K57_19805 PF00990 Diguanylate cyclase, GGDEF domain H9K57_19805 PF00563 EAL domain H9K57_19805 PF03707 Bacterial signalling protein N terminal repeat H9K57_19810 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K57_19810 PF07055 Enoyl reductase FAD binding domain H9K57_19810 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K57_19820 PF00005 ABC transporter H9K57_19835 PF02626 Carboxyltransferase domain, subdomain A and B H9K57_19840 PF02682 Carboxyltransferase domain, subdomain C and D H9K57_19845 PF03746 LamB/YcsF family H9K57_19850 PF00563 EAL domain H9K57_19850 PF00990 Diguanylate cyclase, GGDEF domain H9K57_19850 PF05231 MASE1 H9K57_19850 PF08447 PAS fold H9K57_19850 PF08448 PAS fold H9K57_19850 PF13426 PAS domain H9K57_19855 PF16363 GDP-mannose 4,6 dehydratase H9K57_19860 PF07715 TonB-dependent Receptor Plug Domain H9K57_19860 PF00593 TonB dependent receptor H9K57_19865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_19865 PF03466 LysR substrate binding domain H9K57_19870 PF00583 Acetyltransferase (GNAT) family H9K57_19870 PF13380 CoA binding domain H9K57_19870 PF13607 Succinyl-CoA ligase like flavodoxin domain H9K57_19880 PF07478 D-ala D-ala ligase C-terminus H9K57_19880 PF01820 D-ala D-ala ligase N-terminus H9K57_19890 PF01253 Translation initiation factor SUI1 H9K57_19975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) H9K57_19980 PF02463 RecF/RecN/SMC N terminal domain H9K57_20000 PF03466 LysR substrate binding domain H9K57_20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_20010 PF00582 Universal stress protein family H9K57_20015 PF03701 Uncharacterised protein family (UPF0181) H9K57_20030 PF00072 Response regulator receiver domain H9K57_20030 PF00486 Transcriptional regulatory protein, C terminal H9K57_20040 PF02233 NAD(P) transhydrogenase beta subunit H9K57_20045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K57_20045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K57_20045 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H9K57_20060 PF00990 Diguanylate cyclase, GGDEF domain H9K57_20070 PF00990 Diguanylate cyclase, GGDEF domain H9K57_20070 PF01590 GAF domain H9K57_20070 PF00563 EAL domain H9K57_20070 PF00360 Phytochrome region H9K57_20080 PF00005 ABC transporter H9K57_20080 PF03459 TOBE domain H9K57_20085 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_20095 PF07685 CobB/CobQ-like glutamine amidotransferase domain H9K57_20100 PF04076 Bacterial OB fold (BOF) protein H9K57_20110 PF08443 RimK-like ATP-grasp domain H9K57_20110 PF18030 RimK PreATP-grasp domain H9K57_20115 PF00155 Aminotransferase class I and II H9K57_20120 PF12833 Helix-turn-helix domain H9K57_20125 PF01554 MatE H9K57_20135 PF03477 ATP cone domain H9K57_20135 PF13597 Anaerobic ribonucleoside-triphosphate reductase H9K57_20145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_20165 PF04143 Sulphur transport H9K57_20180 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_20180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K57_20185 PF00384 Molybdopterin oxidoreductase H9K57_20190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_20190 PF03466 LysR substrate binding domain H9K57_20195 PF02634 FdhD/NarQ family H9K57_20200 PF07690 Major Facilitator Superfamily H9K57_20205 PF00196 Bacterial regulatory proteins, luxR family H9K57_20205 PF00072 Response regulator receiver domain H9K57_20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_20210 PF07730 Histidine kinase H9K57_20210 PF05231 MASE1 H9K57_20215 PF07690 Major Facilitator Superfamily H9K57_20220 PF01238 Phosphomannose isomerase type I H9K57_20240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K57_20240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K57_20245 PF00085 Thioredoxin H9K57_20250 PF07690 Major Facilitator Superfamily H9K57_20255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_20255 PF00072 Response regulator receiver domain H9K57_20255 PF07495 Y_Y_Y domain H9K57_20255 PF00512 His Kinase A (phospho-acceptor) domain H9K57_20255 PF07494 Two component regulator propeller H9K57_20255 PF12833 Helix-turn-helix domain H9K57_20260 PF01554 MatE H9K57_20265 PF11756 Nitrous oxide-stimulated promoter H9K57_20280 PF00593 TonB dependent receptor H9K57_20280 PF07715 TonB-dependent Receptor Plug Domain H9K57_20290 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K57_20305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K57_20305 PF10414 Sirohaem synthase dimerisation region H9K57_20305 PF14824 Sirohaem biosynthesis protein central H9K57_20310 PF01226 Formate/nitrite transporter H9K57_20315 PF13806 Rieske-like [2Fe-2S] domain H9K57_20320 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_20320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K57_20320 PF04324 BFD-like [2Fe-2S] binding domain H9K57_20320 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9K57_20320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K57_20325 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K57_20325 PF14760 Rnk N-terminus H9K57_20535 PF03477 ATP cone domain H9K57_20535 PF13597 Anaerobic ribonucleoside-triphosphate reductase H9K57_20540 PF02511 Thymidylate synthase complementing protein H9K57_20590 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K57_20590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K57_20590 PF00929 Exonuclease H9K57_20590 PF14579 Helix-hairpin-helix motif H9K57_20590 PF02811 PHP domain H9K57_20635 PF06965 Na+/H+ antiporter 1 H9K57_20635 PF13462 Thioredoxin H9K57_20655 PF00128 Alpha amylase, catalytic domain H9K57_20655 PF09154 Domain of unknown function (DUF1939) H9K57_20680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_20680 PF00672 HAMP domain H9K57_20685 PF00842 Alanine racemase, C-terminal domain H9K57_20685 PF01168 Alanine racemase, N-terminal domain H9K57_20700 PF01565 FAD binding domain H9K57_20700 PF09330 D-lactate dehydrogenase, membrane binding H9K57_20705 PF03466 LysR substrate binding domain H9K57_20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_20720 PF05762 VWA domain containing CoxE-like protein H9K57_20725 PF07728 AAA domain (dynein-related subfamily) H9K57_20725 PF12592 Protein of unknown function (DUF3763) H9K57_20725 PF17868 AAA lid domain H9K57_20735 PF01212 Beta-eliminating lyase H9K57_20740 PF00034 Cytochrome c H9K57_20745 PF03606 C4-dicarboxylate anaerobic carrier H9K57_20755 PF07690 Major Facilitator Superfamily H9K57_20765 PF08212 Lipocalin-like domain H9K57_20785 PF13476 AAA domain H9K57_20790 PF00149 Calcineurin-like phosphoesterase H9K57_20790 PF12320 Type 5 capsule protein repressor C-terminal domain H9K57_20805 PF04717 Type VI secretion system, phage-baseplate injector H9K57_20805 PF06715 Gp5 C-terminal repeat (3 copies) H9K57_20815 PF07724 AAA domain (Cdc48 subfamily) H9K57_20815 PF17871 AAA lid domain H9K57_20815 PF10431 C-terminal, D2-small domain, of ClpB protein H9K57_20815 PF00004 ATPase family associated with various cellular activities (AAA) H9K57_20825 PF05947 Type VI secretion system, TssF H9K57_20840 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K57_20845 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K57_20850 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H9K57_20870 PF06761 Intracellular multiplication and human macrophage-killing H9K57_20870 PF14331 ImcF-related N-terminal domain H9K57_20870 PF06744 Type VI secretion protein IcmF C-terminal H9K57_20875 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K57_20875 PF00691 OmpA family H9K57_20880 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9K57_20895 PF03793 PASTA domain H9K57_20895 PF00069 Protein kinase domain H9K57_20915 PF00211 Adenylate and Guanylate cyclase catalytic domain H9K57_20915 PF00072 Response regulator receiver domain H9K57_20930 PF08361 MAATS-type transcriptional repressor, C-terminal region H9K57_20930 PF00440 Bacterial regulatory proteins, tetR family H9K57_20955 PF00005 ABC transporter H9K57_20960 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_20965 PF00005 ABC transporter H9K57_20970 PF03861 ANTAR domain H9K57_20970 PF08376 Nitrate and nitrite sensing H9K57_20975 PF01738 Dienelactone hydrolase family H9K57_20980 PF02885 Glycosyl transferase family, helical bundle domain H9K57_20980 PF00591 Glycosyl transferase family, a/b domain H9K57_20985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K57_20985 PF10414 Sirohaem synthase dimerisation region H9K57_20985 PF14824 Sirohaem biosynthesis protein central H9K57_20990 PF01568 Molydopterin dinucleotide binding domain H9K57_20990 PF00384 Molybdopterin oxidoreductase H9K57_20990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_21000 PF03222 Tryptophan/tyrosine permease family H9K57_21005 PF00990 Diguanylate cyclase, GGDEF domain H9K57_21005 PF00072 Response regulator receiver domain H9K57_21015 PF00082 Subtilase family H9K57_21015 PF01483 Proprotein convertase P-domain H9K57_21025 PF00245 Alkaline phosphatase H9K57_21040 PF00072 Response regulator receiver domain H9K57_21040 PF00486 Transcriptional regulatory protein, C terminal H9K57_21055 PF01048 Phosphorylase superfamily H9K57_21060 PF04973 Nicotinamide mononucleotide transporter H9K57_21070 PF00356 Bacterial regulatory proteins, lacI family H9K57_21075 PF00294 pfkB family carbohydrate kinase H9K57_21080 PF13407 Periplasmic binding protein domain H9K57_21085 PF02653 Branched-chain amino acid transport system / permease component H9K57_21090 PF00005 ABC transporter H9K57_21095 PF05025 RbsD / FucU transport protein family H9K57_21100 PF00990 Diguanylate cyclase, GGDEF domain H9K57_21100 PF00563 EAL domain H9K57_21105 PF01048 Phosphorylase superfamily H9K57_21145 PF04116 Fatty acid hydroxylase superfamily H9K57_21160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21160 PF00512 His Kinase A (phospho-acceptor) domain H9K57_21160 PF00072 Response regulator receiver domain H9K57_21160 PF09308 LuxQ, periplasmic H9K57_21165 PF03150 Di-haem cytochrome c peroxidase H9K57_21165 PF00034 Cytochrome c H9K57_21170 PF13188 PAS domain H9K57_21170 PF03707 Bacterial signalling protein N terminal repeat H9K57_21170 PF00990 Diguanylate cyclase, GGDEF domain H9K57_21170 PF00563 EAL domain H9K57_21180 PF16200 C-terminal region of band_7 H9K57_21180 PF01145 SPFH domain / Band 7 family H9K57_21190 PF00881 Nitroreductase family H9K57_21195 PF00571 CBS domain H9K57_21195 PF00005 ABC transporter H9K57_21200 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_21205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9K57_21210 PF00732 GMC oxidoreductase H9K57_21210 PF05199 GMC oxidoreductase H9K57_21215 PF00171 Aldehyde dehydrogenase family H9K57_21220 PF13977 BetI-type transcriptional repressor, C-terminal H9K57_21220 PF00440 Bacterial regulatory proteins, tetR family H9K57_21225 PF17151 Periplasmic sensor domain H9K57_21225 PF00990 Diguanylate cyclase, GGDEF domain H9K57_21235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K57_21235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K57_21245 PF00378 Enoyl-CoA hydratase/isomerase H9K57_21250 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_21250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_21250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_21255 PF00171 Aldehyde dehydrogenase family H9K57_21260 PF02803 Thiolase, C-terminal domain H9K57_21260 PF00108 Thiolase, N-terminal domain H9K57_21265 PF00376 MerR family regulatory protein H9K57_21265 PF09278 MerR, DNA binding H9K57_21270 PF02770 Acyl-CoA dehydrogenase, middle domain H9K57_21270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K57_21270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K57_21275 PF01039 Carboxyl transferase domain H9K57_21280 PF00378 Enoyl-CoA hydratase/isomerase H9K57_21285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K57_21285 PF00364 Biotin-requiring enzyme H9K57_21285 PF00289 Biotin carboxylase, N-terminal domain H9K57_21285 PF02785 Biotin carboxylase C-terminal domain H9K57_21290 PF00682 HMGL-like H9K57_21295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21295 PF01627 Hpt domain H9K57_21295 PF00072 Response regulator receiver domain H9K57_21295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K57_21295 PF00672 HAMP domain H9K57_21295 PF00512 His Kinase A (phospho-acceptor) domain H9K57_21310 PF12794 Mechanosensitive ion channel inner membrane domain 1 H9K57_21310 PF00924 Mechanosensitive ion channel H9K57_21310 PF12795 Mechanosensitive ion channel porin domain H9K57_21315 PF12464 Maltose acetyltransferase H9K57_21315 PF14602 Hexapeptide repeat of succinyl-transferase H9K57_21320 PF00392 Bacterial regulatory proteins, gntR family H9K57_21320 PF00155 Aminotransferase class I and II H9K57_21325 PF01654 Cytochrome bd terminal oxidase subunit I H9K57_21330 PF02322 Cytochrome bd terminal oxidase subunit II H9K57_21340 PF02567 Phenazine biosynthesis-like protein H9K57_21345 PF02627 Carboxymuconolactone decarboxylase family H9K57_21350 PF13411 MerR HTH family regulatory protein H9K57_21360 PF00034 Cytochrome c H9K57_21375 PF00501 AMP-binding enzyme H9K57_21375 PF14535 AMP-binding enzyme C-terminal domain H9K57_21380 PF00005 ABC transporter H9K57_21405 PF00005 ABC transporter H9K57_21405 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K57_21415 PF01012 Electron transfer flavoprotein domain H9K57_21420 PF01012 Electron transfer flavoprotein domain H9K57_21420 PF00766 Electron transfer flavoprotein FAD-binding domain H9K57_21425 PF13193 AMP-binding enzyme C-terminal domain H9K57_21425 PF00501 AMP-binding enzyme H9K57_21430 PF00478 IMP dehydrogenase / GMP reductase domain H9K57_21435 PF01256 Carbohydrate kinase H9K57_21435 PF03853 YjeF-related protein N-terminus H9K57_21445 PF00072 Response regulator receiver domain H9K57_21450 PF00248 Aldo/keto reductase family H9K57_21465 PF00654 Voltage gated chloride channel H9K57_21475 PF01566 Natural resistance-associated macrophage protein H9K57_21480 PF01227 GTP cyclohydrolase I H9K57_21485 PF00994 Probable molybdopterin binding domain H9K57_21485 PF03453 MoeA N-terminal region (domain I and II) H9K57_21485 PF03454 MoeA C-terminal region (domain IV) H9K57_21490 PF00899 ThiF family H9K57_21510 PF00581 Rhodanese-like domain H9K57_21515 PF03707 Bacterial signalling protein N terminal repeat H9K57_21515 PF00990 Diguanylate cyclase, GGDEF domain H9K57_21515 PF00563 EAL domain H9K57_21520 PF08329 Chitinase A, N-terminal domain H9K57_21520 PF00704 Glycosyl hydrolases family 18 H9K57_21530 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K57_21535 PF02779 Transketolase, pyrimidine binding domain H9K57_21535 PF02780 Transketolase, C-terminal domain H9K57_21535 PF00456 Transketolase, thiamine diphosphate binding domain H9K57_21540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_21540 PF08447 PAS fold H9K57_21545 PF07690 Major Facilitator Superfamily H9K57_21550 PF00793 DAHP synthetase I family H9K57_21555 PF01389 OmpA-like transmembrane domain H9K57_21555 PF00691 OmpA family H9K57_21560 PF13419 Haloacid dehalogenase-like hydrolase H9K57_21565 PF00472 RF-1 domain H9K57_21570 PF00672 HAMP domain H9K57_21570 PF17200 Single Cache domain 2 H9K57_21570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_21575 PF00873 AcrB/AcrD/AcrF family H9K57_21580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_21585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K57_21590 PF07687 Peptidase dimerisation domain H9K57_21590 PF01546 Peptidase family M20/M25/M40 H9K57_21605 PF00196 Bacterial regulatory proteins, luxR family H9K57_21605 PF00072 Response regulator receiver domain H9K57_21610 PF07730 Histidine kinase H9K57_21610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21610 PF00672 HAMP domain H9K57_21610 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H9K57_21615 PF12838 4Fe-4S dicluster domain H9K57_21615 PF13187 4Fe-4S dicluster domain H9K57_21625 PF00384 Molybdopterin oxidoreductase H9K57_21625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K57_21625 PF01568 Molydopterin dinucleotide binding domain H9K57_21630 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H9K57_21635 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K57_21645 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H9K57_21645 PF00561 alpha/beta hydrolase fold H9K57_21655 PF02803 Thiolase, C-terminal domain H9K57_21655 PF00108 Thiolase, N-terminal domain H9K57_21660 PF00106 short chain dehydrogenase H9K57_21675 PF02355 Protein export membrane protein H9K57_21675 PF07549 SecD/SecF GG Motif H9K57_21680 PF13721 SecD export protein N-terminal TM region H9K57_21680 PF02355 Protein export membrane protein H9K57_21680 PF07549 SecD/SecF GG Motif H9K57_21705 PF01037 Lrp/AsnC ligand binding domain H9K57_21725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_21725 PF00529 HlyD membrane-fusion protein of T1SS H9K57_21735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21735 PF00512 His Kinase A (phospho-acceptor) domain H9K57_21735 PF09308 LuxQ, periplasmic H9K57_21735 PF00072 Response regulator receiver domain H9K57_21740 PF13407 Periplasmic binding protein domain H9K57_21745 PF01541 GIY-YIG catalytic domain H9K57_21750 PF04337 Protein of unknown function, DUF480 H9K57_21760 PF04363 Protein of unknown function (DUF496) H9K57_21765 PF01554 MatE H9K57_21770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9K57_21775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K57_21775 PF00072 Response regulator receiver domain H9K57_21775 PF00672 HAMP domain H9K57_21775 PF00512 His Kinase A (phospho-acceptor) domain H9K57_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21775 PF01627 Hpt domain H9K57_21780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K57_21780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K57_21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_21795 PF03466 LysR substrate binding domain H9K57_21800 PF13404 AsnC-type helix-turn-helix domain H9K57_21800 PF01037 Lrp/AsnC ligand binding domain H9K57_21805 PF13520 Amino acid permease H9K57_21810 PF00155 Aminotransferase class I and II H9K57_21810 PF00392 Bacterial regulatory proteins, gntR family H9K57_21820 PF03109 ABC1 family H9K57_21825 PF00571 CBS domain H9K57_21825 PF01769 Divalent cation transporter H9K57_21825 PF03448 MgtE intracellular N domain H9K57_21830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H9K57_21835 PF07969 Amidohydrolase family H9K57_21845 PF01966 HD domain H9K57_21855 PF07690 Major Facilitator Superfamily H9K57_21865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K57_21870 PF00255 Glutathione peroxidase H9K57_21885 PF01323 DSBA-like thioredoxin domain H9K57_21900 PF00106 short chain dehydrogenase H9K57_21905 PF00072 Response regulator receiver domain H9K57_21905 PF00486 Transcriptional regulatory protein, C terminal H9K57_21910 PF00512 His Kinase A (phospho-acceptor) domain H9K57_21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_21910 PF00672 HAMP domain H9K57_21920 PF01219 Prokaryotic diacylglycerol kinase H9K57_21925 PF08019 Phosphoethanolamine transferase EptA/EptB H9K57_21925 PF00884 Sulfatase H9K57_21930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9K57_21940 PF07690 Major Facilitator Superfamily H9K57_21955 PF01047 MarR family H9K57_21965 PF01734 Patatin-like phospholipase H9K57_21970 PF02678 Pirin H9K57_21970 PF05726 Pirin C-terminal cupin domain H9K57_21975 PF00313 'Cold-shock' DNA-binding domain H9K57_21985 PF00962 Adenosine/AMP deaminase H9K57_21990 PF08534 Redoxin H9K57_21990 PF00462 Glutaredoxin H9K57_22000 PF07943 Penicillin-binding protein 5, C-terminal domain H9K57_22000 PF00768 D-alanyl-D-alanine carboxypeptidase H9K57_22005 PF02798 Glutathione S-transferase, N-terminal domain H9K57_22010 PF02909 Tetracyclin repressor-like, C-terminal domain H9K57_22010 PF00440 Bacterial regulatory proteins, tetR family H9K57_22015 PF01872 RibD C-terminal domain H9K57_22035 PF00682 HMGL-like H9K57_22035 PF08502 LeuA allosteric (dimerisation) domain H9K57_22080 PF05853 beta-keto acid cleavage enzyme H9K57_22090 PF02803 Thiolase, C-terminal domain H9K57_22090 PF00108 Thiolase, N-terminal domain H9K57_22110 PF00005 ABC transporter H9K57_22110 PF00664 ABC transporter transmembrane region H9K57_22110 PF03412 Peptidase C39 family H9K57_22115 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) H9K57_22115 PF02382 N-terminal domain in RTX protein H9K57_22115 PF08339 RTX C-terminal domain H9K57_22120 PF02794 RTX toxin acyltransferase family H9K57_22135 PF01473 Putative cell wall binding repeat H9K57_22135 PF11713 Peptidase C80 family H9K57_22135 PF12918 TcdB toxin N-terminal helical domain H9K57_22135 PF12920 TcdA/TcdB pore forming domain H9K57_22135 PF12919 TcdA/TcdB catalytic glycosyltransferase domain H9K57_22160 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9K57_22165 PF01730 UreF H9K57_22170 PF05194 UreE urease accessory protein, C-terminal domain H9K57_22170 PF02814 UreE urease accessory protein, N-terminal domain H9K57_22175 PF01979 Amidohydrolase family H9K57_22175 PF00449 Urease alpha-subunit, N-terminal domain H9K57_22180 PF00699 Urease beta subunit H9K57_22185 PF00547 Urease, gamma subunit H9K57_22190 PF01774 UreD urease accessory protein H9K57_22195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_22200 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22205 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22205 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K57_22210 PF00005 ABC transporter H9K57_22210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K57_22215 PF00005 ABC transporter H9K57_22220 PF12833 Helix-turn-helix domain H9K57_22225 PF03347 Vibrio thermostable direct hemolysin H9K57_22235 PF13737 Transposase DDE domain H9K57_22250 PF01527 Transposase H9K57_22270 PF00816 H-NS histone family H9K57_22275 PF13322 Domain of unknown function (DUF4092) H9K57_22275 PF17291 N-terminal domain of M60-like peptidases H9K57_22275 PF13402 Peptidase M60, enhancin and enhancin-like H9K57_22285 PF00892 EamA-like transporter family H9K57_22320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K57_22320 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K57_22320 PF18269 T3SS EscN ATPase C-terminal domain H9K57_22325 PF00263 Bacterial type II and III secretion system protein H9K57_22325 PF03958 Bacterial type II/III secretion system short domain H9K57_22340 PF00813 FliP family H9K57_22350 PF00486 Transcriptional regulatory protein, C terminal H9K57_22380 PF01312 FlhB HrpN YscU SpaS Family H9K57_22385 PF00771 FHIPEP family H9K57_22495 PF00563 EAL domain H9K57_22495 PF13426 PAS domain H9K57_22495 PF00990 Diguanylate cyclase, GGDEF domain H9K57_22520 PF01548 Transposase H9K57_22520 PF02371 Transposase IS116/IS110/IS902 family H9K57_22585 PF00665 Integrase core domain H9K57_22585 PF09299 Mu transposase, C-terminal H9K57_22605 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22610 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22610 PF14785 Maltose transport system permease protein MalF P2 domain H9K57_22615 PF01547 Bacterial extracellular solute-binding protein H9K57_22620 PF08402 TOBE domain H9K57_22620 PF00005 ABC transporter H9K57_22625 PF02397 Bacterial sugar transferase H9K57_22640 PF13614 AAA domain H9K57_22640 PF02706 Chain length determinant protein H9K57_22640 PF13807 G-rich domain on putative tyrosine kinase H9K57_22650 PF00534 Glycosyl transferases group 1 H9K57_22680 PF04266 ASCH domain H9K57_22685 PF16925 Tetracyclin repressor-like, C-terminal domain H9K57_22685 PF00440 Bacterial regulatory proteins, tetR family H9K57_22690 PF16884 N-terminal domain of oxidoreductase H9K57_22690 PF00107 Zinc-binding dehydrogenase H9K57_22695 PF13417 Glutathione S-transferase, N-terminal domain H9K57_22700 PF06628 Catalase-related immune-responsive H9K57_22700 PF00199 Catalase H9K57_22705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K57_22705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K57_22715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_22725 PF12833 Helix-turn-helix domain H9K57_22730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K57_22730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K57_22735 PF01238 Phosphomannose isomerase type I H9K57_22745 PF13419 Haloacid dehalogenase-like hydrolase H9K57_22750 PF00127 Copper binding proteins, plastocyanin/azurin family H9K57_22755 PF00563 EAL domain H9K57_22755 PF03707 Bacterial signalling protein N terminal repeat H9K57_22755 PF00990 Diguanylate cyclase, GGDEF domain H9K57_22760 PF02386 Cation transport protein H9K57_22765 PF02080 TrkA-C domain H9K57_22765 PF02254 TrkA-N domain H9K57_22770 PF00072 Response regulator receiver domain H9K57_22770 PF00486 Transcriptional regulatory protein, C terminal H9K57_22775 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K57_22775 PF00512 His Kinase A (phospho-acceptor) domain H9K57_22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_22775 PF13493 Domain of unknown function (DUF4118) H9K57_22775 PF00512 His Kinase A (phospho-acceptor) domain H9K57_22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_22775 PF13493 Domain of unknown function (DUF4118) H9K57_22775 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K57_22780 PF00664 ABC transporter transmembrane region H9K57_22780 PF00005 ABC transporter H9K57_22785 PF07715 TonB-dependent Receptor Plug Domain H9K57_22785 PF00593 TonB dependent receptor H9K57_22790 PF00005 ABC transporter H9K57_22795 PF01497 Periplasmic binding protein H9K57_22800 PF01032 FecCD transport family H9K57_22810 PF01389 OmpA-like transmembrane domain H9K57_22810 PF00691 OmpA family H9K57_22825 PF00529 HlyD membrane-fusion protein of T1SS H9K57_22830 PF00664 ABC transporter transmembrane region H9K57_22830 PF00005 ABC transporter H9K57_22840 PF00196 Bacterial regulatory proteins, luxR family H9K57_22845 PF00196 Bacterial regulatory proteins, luxR family H9K57_22855 PF00672 HAMP domain H9K57_22855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_22855 PF02743 Cache domain H9K57_22860 PF17863 AAA lid domain H9K57_22860 PF07726 ATPase family associated with various cellular activities (AAA) H9K57_22865 PF01882 Protein of unknown function DUF58 H9K57_22875 PF13519 von Willebrand factor type A domain H9K57_22880 PF07584 Aerotolerance regulator N-terminal H9K57_22880 PF13519 von Willebrand factor type A domain H9K57_22895 PF00005 ABC transporter H9K57_22900 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22905 PF00528 Binding-protein-dependent transport system inner membrane component H9K57_22910 PF12849 PBP superfamily domain H9K57_22915 PF00672 HAMP domain H9K57_22915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_22935 PF07715 TonB-dependent Receptor Plug Domain H9K57_22935 PF00593 TonB dependent receptor H9K57_22940 PF00326 Prolyl oligopeptidase family H9K57_22940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K57_22945 PF00271 Helicase conserved C-terminal domain H9K57_22945 PF00270 DEAD/DEAH box helicase H9K57_22955 PF03734 L,D-transpeptidase catalytic domain H9K57_22955 PF01476 LysM domain H9K57_22955 PF17969 L,D-transpeptidase C-terminal domain H9K57_22960 PF00875 DNA photolyase H9K57_22960 PF03441 FAD binding domain of DNA photolyase H9K57_22965 PF13411 MerR HTH family regulatory protein H9K57_22970 PF08349 Protein of unknown function (DUF1722) H9K57_22975 PF01048 Phosphorylase superfamily H9K57_22990 PF00990 Diguanylate cyclase, GGDEF domain H9K57_22995 PF11742 Protein of unknown function (DUF3302) H9K57_23000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K57_23000 PF00529 HlyD membrane-fusion protein of T1SS H9K57_23005 PF07155 ECF-type riboflavin transporter, S component H9K57_23010 PF00005 ABC transporter H9K57_23010 PF12558 ATP-binding cassette cobalt transporter H9K57_23025 PF13237 4Fe-4S dicluster domain H9K57_23025 PF12801 4Fe-4S binding domain H9K57_23030 PF12800 4Fe-4S binding domain H9K57_23030 PF12838 4Fe-4S dicluster domain H9K57_23035 PF00583 Acetyltransferase (GNAT) family H9K57_23050 PF07238 PilZ domain H9K57_23050 PF12945 Flagellar protein YcgR H9K57_23055 PF00672 HAMP domain H9K57_23055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_23060 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K57_23060 PF13654 AAA domain H9K57_23075 PF00326 Prolyl oligopeptidase family H9K57_23075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K57_23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23080 PF03466 LysR substrate binding domain H9K57_23085 PF02652 L-lactate permease H9K57_23090 PF01070 FMN-dependent dehydrogenase H9K57_23100 PF00924 Mechanosensitive ion channel H9K57_23105 PF00194 Eukaryotic-type carbonic anhydrase H9K57_23135 PF00107 Zinc-binding dehydrogenase H9K57_23135 PF08240 Alcohol dehydrogenase GroES-like domain H9K57_23140 PF00155 Aminotransferase class I and II H9K57_23145 PF03707 Bacterial signalling protein N terminal repeat H9K57_23145 PF00990 Diguanylate cyclase, GGDEF domain H9K57_23145 PF00563 EAL domain H9K57_23150 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K57_23155 PF00266 Aminotransferase class-V H9K57_23160 PF00080 Copper/zinc superoxide dismutase (SODC) H9K57_23165 PF13426 PAS domain H9K57_23165 PF08448 PAS fold H9K57_23165 PF00072 Response regulator receiver domain H9K57_23165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_23165 PF00512 His Kinase A (phospho-acceptor) domain H9K57_23170 PF00072 Response regulator receiver domain H9K57_23170 PF00486 Transcriptional regulatory protein, C terminal H9K57_23190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23190 PF03466 LysR substrate binding domain H9K57_23195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K57_23225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23225 PF03466 LysR substrate binding domain H9K57_23240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K57_23240 PF18269 T3SS EscN ATPase C-terminal domain H9K57_23250 PF14842 FliG N-terminal domain H9K57_23250 PF14841 FliG middle domain H9K57_23250 PF01706 FliG C-terminal domain H9K57_23255 PF01514 Secretory protein of YscJ/FliF family H9K57_23255 PF08345 Flagellar M-ring protein C-terminal H9K57_23260 PF02049 Flagellar hook-basal body complex protein FliE H9K57_23265 PF02954 Bacterial regulatory protein, Fis family H9K57_23265 PF00072 Response regulator receiver domain H9K57_23265 PF00158 Sigma-54 interaction domain H9K57_23280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K57_23285 PF00813 FliP family H9K57_23290 PF01313 Bacterial export proteins, family 3 H9K57_23295 PF01311 Bacterial export proteins, family 1 H9K57_23300 PF01312 FlhB HrpN YscU SpaS Family H9K57_23305 PF00771 FHIPEP family H9K57_23315 PF00700 Bacterial flagellin C-terminal helical region H9K57_23315 PF00669 Bacterial flagellin N-terminal helical region H9K57_23335 PF07196 Flagellin hook IN motif H9K57_23335 PF07195 Flagellar hook-associated protein 2 C-terminus H9K57_23335 PF02465 Flagellar hook-associated protein 2 N-terminus H9K57_23340 PF02561 Flagellar protein FliS H9K57_23355 PF03748 Flagellar basal body-associated protein FliL H9K57_23360 PF04542 Sigma-70 region 2 H9K57_23360 PF04545 Sigma-70, region 4 H9K57_23365 PF01618 MotA/TolQ/ExbB proton channel family H9K57_23370 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K57_23370 PF00691 OmpA family H9K57_23380 PF08000 Bacterial PH domain H9K57_23415 PF02901 Pyruvate formate lyase-like H9K57_23415 PF01228 Glycine radical H9K57_23420 PF04055 Radical SAM superfamily H9K57_23425 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K57_23435 PF00583 Acetyltransferase (GNAT) family H9K57_23445 PF07690 Major Facilitator Superfamily H9K57_23450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23450 PF03466 LysR substrate binding domain H9K57_23455 PF00892 EamA-like transporter family H9K57_23475 PF13533 Biotin-lipoyl like H9K57_23485 PF01594 AI-2E family transporter H9K57_23490 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K57_23500 PF00970 Oxidoreductase FAD-binding domain H9K57_23500 PF00175 Oxidoreductase NAD-binding domain H9K57_23510 PF09905 DNA-binding protein VF530 H9K57_23515 PF03466 LysR substrate binding domain H9K57_23515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23525 PF00881 Nitroreductase family H9K57_23530 PF12833 Helix-turn-helix domain H9K57_23530 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9K57_23535 PF00128 Alpha amylase, catalytic domain H9K57_23535 PF00686 Starch binding domain H9K57_23540 PF07943 Penicillin-binding protein 5, C-terminal domain H9K57_23540 PF00768 D-alanyl-D-alanine carboxypeptidase H9K57_23545 PF00561 alpha/beta hydrolase fold H9K57_23555 PF00581 Rhodanese-like domain H9K57_23555 PF17773 UPF0176 acylphosphatase like domain H9K57_23560 PF18416 N-acetylglucosamine binding protein domain 2 H9K57_23560 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K57_23565 PF01734 Patatin-like phospholipase H9K57_23570 PF01914 MarC family integral membrane protein H9K57_23575 PF00881 Nitroreductase family H9K57_23580 PF10531 SLBB domain H9K57_23580 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H9K57_23580 PF02563 Polysaccharide biosynthesis/export protein H9K57_23585 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K57_23590 PF13614 AAA domain H9K57_23590 PF13807 G-rich domain on putative tyrosine kinase H9K57_23590 PF02706 Chain length determinant protein H9K57_23600 PF08803 Putative mono-oxygenase ydhR H9K57_23605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23605 PF03466 LysR substrate binding domain H9K57_23615 PF00375 Sodium:dicarboxylate symporter family H9K57_23620 PF06803 Protein of unknown function (DUF1232) H9K57_23625 PF07687 Peptidase dimerisation domain H9K57_23625 PF01546 Peptidase family M20/M25/M40 H9K57_23630 PF07670 Nucleoside recognition H9K57_23635 PF07670 Nucleoside recognition H9K57_23650 PF00128 Alpha amylase, catalytic domain H9K57_23655 PF00912 Transglycosylase H9K57_23660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K57_23660 PF00128 Alpha amylase, catalytic domain H9K57_23660 PF02806 Alpha amylase, C-terminal all-beta domain H9K57_23665 PF02446 4-alpha-glucanotransferase H9K57_23670 PF00343 Carbohydrate phosphorylase H9K57_23680 PF17874 MalT-like TPR region H9K57_23680 PF00196 Bacterial regulatory proteins, luxR family H9K57_23695 PF02630 SCO1/SenC H9K57_23705 PF02378 Phosphotransferase system, EIIC H9K57_23705 PF00367 phosphotransferase system, EIIB H9K57_23710 PF03193 RsgA GTPase H9K57_23715 PF00375 Sodium:dicarboxylate symporter family H9K57_23725 PF08543 Phosphomethylpyrimidine kinase H9K57_23735 PF13520 Amino acid permease H9K57_23740 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K57_23740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K57_23740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K57_23755 PF11852 Domain of unknown function (DUF3372) H9K57_23755 PF03714 Bacterial pullanase-associated domain H9K57_23755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K57_23755 PF17967 Pullulanase N2 domain H9K57_23755 PF18494 Pullulanase Ins domain H9K57_23760 PF04231 Endonuclease I H9K57_23765 PF16657 Maltogenic Amylase, C-terminal domain H9K57_23765 PF02903 Alpha amylase, N-terminal ig-like domain H9K57_23765 PF00128 Alpha amylase, catalytic domain H9K57_23780 PF02264 LamB porin H9K57_23785 PF00128 Alpha amylase, catalytic domain H9K57_23785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K57_23795 PF07690 Major Facilitator Superfamily H9K57_23805 PF01551 Peptidase family M23 H9K57_23805 PF04225 Opacity-associated protein A LysM-like domain H9K57_23815 PF00675 Insulinase (Peptidase family M16) H9K57_23815 PF05193 Peptidase M16 inactive domain H9K57_23820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_23820 PF17200 Single Cache domain 2 H9K57_23820 PF00672 HAMP domain H9K57_23825 PF00005 ABC transporter H9K57_23830 PF01032 FecCD transport family H9K57_23835 PF01032 FecCD transport family H9K57_23840 PF01497 Periplasmic binding protein H9K57_23845 PF07715 TonB-dependent Receptor Plug Domain H9K57_23845 PF07660 Secretin and TonB N terminus short domain H9K57_23845 PF00593 TonB dependent receptor H9K57_23850 PF07715 TonB-dependent Receptor Plug Domain H9K57_23850 PF00593 TonB dependent receptor H9K57_23855 PF02655 ATP-grasp domain H9K57_23855 PF00206 Lyase H9K57_23860 PF04183 IucA / IucC family H9K57_23860 PF06276 Ferric iron reductase FhuF-like transporter H9K57_23870 PF04183 IucA / IucC family H9K57_23870 PF06276 Ferric iron reductase FhuF-like transporter H9K57_23875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K57_23875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K57_23880 PF01547 Bacterial extracellular solute-binding protein H9K57_23885 PF08521 Two-component sensor kinase N-terminal H9K57_23885 PF00512 His Kinase A (phospho-acceptor) domain H9K57_23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_23890 PF00486 Transcriptional regulatory protein, C terminal H9K57_23890 PF00072 Response regulator receiver domain H9K57_23895 PF02378 Phosphotransferase system, EIIC H9K57_23895 PF00367 phosphotransferase system, EIIB H9K57_23905 PF01136 Peptidase family U32 H9K57_23910 PF02653 Branched-chain amino acid transport system / permease component H9K57_23920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K57_23925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K57_23925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K57_23930 PF00596 Class II Aldolase and Adducin N-terminal domain H9K57_23935 PF11762 L-arabinose isomerase C-terminal domain H9K57_23935 PF02610 L-arabinose isomerase H9K57_23945 PF02311 AraC-like ligand binding domain H9K57_23945 PF12833 Helix-turn-helix domain H9K57_23960 PF02566 OsmC-like protein H9K57_23965 PF01047 MarR family H9K57_23970 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K57_23970 PF00578 AhpC/TSA family H9K57_23975 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K57_23975 PF13192 Thioredoxin domain H9K57_23990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_23990 PF03466 LysR substrate binding domain H9K57_23995 PF01965 DJ-1/PfpI family H9K57_23995 PF12833 Helix-turn-helix domain H9K57_24000 PF08281 Sigma-70, region 4 H9K57_24000 PF04542 Sigma-70 region 2 H9K57_24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K57_24010 PF00672 HAMP domain H9K57_24010 PF02743 Cache domain H9K57_24015 PF03466 LysR substrate binding domain H9K57_24015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_24020 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K57_24020 PF02056 Family 4 glycosyl hydrolase H9K57_24035 PF03475 3-alpha domain H9K57_24035 PF03473 MOSC domain H9K57_24040 PF00270 DEAD/DEAH box helicase H9K57_24040 PF00271 Helicase conserved C-terminal domain H9K57_24045 PF03786 D-mannonate dehydratase (UxuA) H9K57_24050 PF07729 FCD domain H9K57_24050 PF00392 Bacterial regulatory proteins, gntR family H9K57_24055 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K57_24060 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K57_24065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K57_24070 PF01232 Mannitol dehydrogenase Rossmann domain H9K57_24070 PF08125 Mannitol dehydrogenase C-terminal domain H9K57_24075 PF02614 Glucuronate isomerase H9K57_24080 PF00294 pfkB family carbohydrate kinase H9K57_24085 PF01081 KDPG and KHG aldolase H9K57_24090 PF10688 Bacterial inner membrane protein H9K57_24105 PF06719 AraC-type transcriptional regulator N-terminus H9K57_24105 PF12833 Helix-turn-helix domain H9K57_24115 PF00005 ABC transporter H9K57_24115 PF00664 ABC transporter transmembrane region H9K57_24125 PF01037 Lrp/AsnC ligand binding domain H9K57_24160 PF00474 Sodium:solute symporter family H9K57_24170 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H9K57_24170 PF14850 DNA-binding domain of Proline dehydrogenase H9K57_24170 PF00171 Aldehyde dehydrogenase family H9K57_24170 PF01619 Proline dehydrogenase H9K57_24175 PF12833 Helix-turn-helix domain H9K57_24185 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H9K57_24185 PF01243 Pyridoxamine 5'-phosphate oxidase H9K57_24190 PF00512 His Kinase A (phospho-acceptor) domain H9K57_24190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K57_24190 PF02743 Cache domain H9K57_24195 PF00158 Sigma-54 interaction domain H9K57_24195 PF02954 Bacterial regulatory protein, Fis family H9K57_24195 PF00072 Response regulator receiver domain H9K57_24200 PF00529 HlyD membrane-fusion protein of T1SS H9K57_24215 PF00664 ABC transporter transmembrane region H9K57_24215 PF03412 Peptidase C39 family H9K57_24215 PF00005 ABC transporter H9K57_24225 PF03358 NADPH-dependent FMN reductase H9K57_24230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K57_24235 PF00246 Zinc carboxypeptidase H9K57_24240 PF01418 Helix-turn-helix domain, rpiR family H9K57_24240 PF01380 SIS domain H9K57_24245 PF01380 SIS domain H9K57_24250 PF00367 phosphotransferase system, EIIB H9K57_24250 PF02378 Phosphotransferase system, EIIC H9K57_24255 PF00267 Gram-negative porin H9K57_24260 PF03575 Peptidase family S51 H9K57_24265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K57_24265 PF03466 LysR substrate binding domain H9K57_24270 PF00132 Bacterial transferase hexapeptide (six repeats) H9K57_24280 PF13718 GNAT acetyltransferase 2 H9K57_24280 PF05127 Helicase H9K57_24365 PF01848 Hok/gef family H9K57_24435 PF03743 Bacterial conjugation TrbI-like protein H9K57_24535 PF13614 AAA domain H9K57_24540 PF13614 AAA domain H9K57_24620 PF00691 OmpA family H9K57_24685 PF01797 Transposase IS200 like