locus-tag class description H9K44_00005 PF00308 Bacterial dnaA protein H9K44_00005 PF08299 Bacterial dnaA protein helix-turn-helix H9K44_00005 PF11638 DnaA N-terminal domain H9K44_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H9K44_00010 PF02767 DNA polymerase III beta subunit, central domain H9K44_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H9K44_00015 PF02463 RecF/RecN/SMC N terminal domain H9K44_00020 PF00204 DNA gyrase B H9K44_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H9K44_00020 PF18053 DNA gyrase B subunit insert domain H9K44_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_00020 PF01751 Toprim domain H9K44_00030 PF00011 Hsp20/alpha crystallin family H9K44_00035 PF00155 Aminotransferase class I and II H9K44_00040 PF00128 Alpha amylase, catalytic domain H9K44_00045 PF05746 DALR anticodon binding domain H9K44_00045 PF02092 Glycyl-tRNA synthetase beta subunit H9K44_00050 PF02091 Glycyl-tRNA synthetase alpha subunit H9K44_00055 PF01169 Uncharacterized protein family UPF0016 H9K44_00065 PF01206 Sulfurtransferase TusA H9K44_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_00075 PF03466 LysR substrate binding domain H9K44_00080 PF00107 Zinc-binding dehydrogenase H9K44_00080 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_00085 PF02803 Thiolase, C-terminal domain H9K44_00085 PF00108 Thiolase, N-terminal domain H9K44_00090 PF00378 Enoyl-CoA hydratase/isomerase H9K44_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K44_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K44_00095 PF01205 Uncharacterized protein family UPF0029 H9K44_00095 PF09186 Domain of unknown function (DUF1949) H9K44_00100 PF02386 Cation transport protein H9K44_00105 PF12724 Flavodoxin domain H9K44_00150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H9K44_00155 PF13667 ThiC-associated domain H9K44_00155 PF01964 Radical SAM ThiC family H9K44_00160 PF02581 Thiamine monophosphate synthase H9K44_00165 PF00899 ThiF family H9K44_00170 PF02597 ThiS family H9K44_00175 PF05690 Thiazole biosynthesis protein ThiG H9K44_00180 PF06968 Biotin and Thiamin Synthesis associated domain H9K44_00180 PF04055 Radical SAM superfamily H9K44_00185 PF01321 Creatinase/Prolidase N-terminal domain H9K44_00185 PF01321 Creatinase/Prolidase N-terminal domain H9K44_00185 PF00557 Metallopeptidase family M24 H9K44_00185 PF00557 Metallopeptidase family M24 H9K44_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_00190 PF03466 LysR substrate binding domain H9K44_00195 PF07690 Major Facilitator Superfamily H9K44_00215 PF05114 Protein of unknown function (DUF692) H9K44_00225 PF13361 UvrD-like helicase C-terminal domain H9K44_00225 PF00580 UvrD/REP helicase N-terminal domain H9K44_00235 PF01810 LysE type translocator H9K44_00245 PF00892 EamA-like transporter family H9K44_00250 PF16124 RecQ zinc-binding H9K44_00250 PF09382 RQC domain H9K44_00250 PF00570 HRDC domain H9K44_00250 PF00271 Helicase conserved C-terminal domain H9K44_00250 PF00270 DEAD/DEAH box helicase H9K44_00260 PF02592 Putative vitamin uptake transporter H9K44_00265 PF02541 Ppx/GppA phosphatase family H9K44_00270 PF00270 DEAD/DEAH box helicase H9K44_00270 PF00271 Helicase conserved C-terminal domain H9K44_00275 PF00085 Thioredoxin H9K44_00280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_00280 PF07498 Rho termination factor, N-terminal domain H9K44_00280 PF07497 Rho termination factor, RNA-binding domain H9K44_00290 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H9K44_00295 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_00300 PF00175 Oxidoreductase NAD-binding domain H9K44_00370 PF11471 Maltoporin periplasmic N-terminal extension H9K44_00370 PF02264 LamB porin H9K44_00375 PF00356 Bacterial regulatory proteins, lacI family H9K44_00380 PF02378 Phosphotransferase system, EIIC H9K44_00380 PF00367 phosphotransferase system, EIIB H9K44_00385 PF00294 pfkB family carbohydrate kinase H9K44_00390 PF08244 Glycosyl hydrolases family 32 C terminal H9K44_00390 PF00251 Glycosyl hydrolases family 32 N-terminal domain H9K44_00400 PF07219 HemY protein N-terminus H9K44_00405 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase H9K44_00410 PF02602 Uroporphyrinogen-III synthase HemD H9K44_00415 PF03900 Porphobilinogen deaminase, C-terminal domain H9K44_00415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H9K44_00420 PF01295 Adenylate cyclase, class-I H9K44_00420 PF12633 Adenylate cyclase NT domain H9K44_00425 PF01491 Frataxin-like domain H9K44_00435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K44_00435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K44_00440 PF01678 Diaminopimelate epimerase H9K44_00450 PF00589 Phage integrase family H9K44_00450 PF02899 Phage integrase, N-terminal SAM-like domain H9K44_00455 PF13419 Haloacid dehalogenase-like hydrolase H9K44_00460 PF00563 EAL domain H9K44_00460 PF10442 FIST C domain H9K44_00460 PF00990 Diguanylate cyclase, GGDEF domain H9K44_00460 PF08495 FIST N domain H9K44_00465 PF03942 DTW domain H9K44_00485 PF12146 Serine aminopeptidase, S33 H9K44_00490 PF01810 LysE type translocator H9K44_00495 PF00563 EAL domain H9K44_00495 PF08668 HDOD domain H9K44_00500 PF01022 Bacterial regulatory protein, arsR family H9K44_00505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K44_00505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K44_00550 PF01914 MarC family integral membrane protein H9K44_00565 PF00448 SRP54-type protein, GTPase domain H9K44_00565 PF02881 SRP54-type protein, helical bundle domain H9K44_00570 PF00005 ABC transporter H9K44_00575 PF18075 FtsX extracellular domain H9K44_00580 PF00140 Sigma-70 factor, region 1.2 H9K44_00580 PF04542 Sigma-70 region 2 H9K44_00580 PF04545 Sigma-70, region 4 H9K44_00585 PF00581 Rhodanese-like domain H9K44_00590 PF01694 Rhomboid family H9K44_00590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease H9K44_00595 PF03748 Flagellar basal body-associated protein FliL H9K44_00600 PF04345 Chorismate lyase H9K44_00605 PF01040 UbiA prenyltransferase family H9K44_00610 PF01553 Acyltransferase H9K44_00615 PF00717 Peptidase S24-like H9K44_00615 PF01726 LexA DNA binding domain H9K44_00620 PF04072 Leucine carboxyl methyltransferase H9K44_00625 PF01554 MatE H9K44_00630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K44_00630 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_00635 PF00440 Bacterial regulatory proteins, tetR family H9K44_00645 PF05958 tRNA (Uracil-5-)-methyltransferase H9K44_00650 PF07715 TonB-dependent Receptor Plug Domain H9K44_00650 PF00593 TonB dependent receptor H9K44_00660 PF01177 Asp/Glu/Hydantoin racemase H9K44_00725 PF13091 PLD-like domain H9K44_00735 PF01565 FAD binding domain H9K44_00735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H9K44_00740 PF08279 HTH domain H9K44_00740 PF02237 Biotin protein ligase C terminal domain H9K44_00740 PF03099 Biotin/lipoate A/B protein ligase family H9K44_00745 PF00485 Phosphoribulokinase / Uridine kinase family H9K44_00770 PF00009 Elongation factor Tu GTP binding domain H9K44_00770 PF03144 Elongation factor Tu domain 2 H9K44_00770 PF03143 Elongation factor Tu C-terminal domain H9K44_00775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H9K44_00780 PF02357 Transcription termination factor nusG H9K44_00780 PF00467 KOW motif H9K44_00785 PF00298 Ribosomal protein L11, RNA binding domain H9K44_00785 PF03946 Ribosomal protein L11, N-terminal domain H9K44_00790 PF00687 Ribosomal protein L1p/L10e family H9K44_00795 PF00466 Ribosomal protein L10 H9K44_00800 PF16320 Ribosomal protein L7/L12 dimerisation domain H9K44_00800 PF00542 Ribosomal protein L7/L12 C-terminal domain H9K44_00805 PF04565 RNA polymerase Rpb2, domain 3 H9K44_00805 PF10385 RNA polymerase beta subunit external 1 domain H9K44_00805 PF04563 RNA polymerase beta subunit H9K44_00805 PF00562 RNA polymerase Rpb2, domain 6 H9K44_00805 PF04560 RNA polymerase Rpb2, domain 7 H9K44_00805 PF04561 RNA polymerase Rpb2, domain 2 H9K44_00810 PF04997 RNA polymerase Rpb1, domain 1 H9K44_00810 PF00623 RNA polymerase Rpb1, domain 2 H9K44_00810 PF04983 RNA polymerase Rpb1, domain 3 H9K44_00810 PF05000 RNA polymerase Rpb1, domain 4 H9K44_00810 PF04998 RNA polymerase Rpb1, domain 5 H9K44_00815 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H9K44_00820 PF00293 NUDIX domain H9K44_00820 PF09297 NADH pyrophosphatase zinc ribbon domain H9K44_00835 PF01208 Uroporphyrinogen decarboxylase (URO-D) H9K44_00840 PF03167 Uracil DNA glycosylase superfamily H9K44_00845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K44_00850 PF04222 Protein of unknown function (DUF416) H9K44_00855 PF00571 CBS domain H9K44_00855 PF01595 Cyclin M transmembrane N-terminal domain H9K44_00860 PF00216 Bacterial DNA-binding protein H9K44_00870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H9K44_00870 PF02843 Phosphoribosylglycinamide synthetase, C domain H9K44_00870 PF02844 Phosphoribosylglycinamide synthetase, N domain H9K44_00875 PF01808 AICARFT/IMPCHase bienzyme H9K44_00875 PF02142 MGS-like domain H9K44_00880 PF13411 MerR HTH family regulatory protein H9K44_00885 PF00486 Transcriptional regulatory protein, C terminal H9K44_00885 PF18500 CadC C-terminal domain 1 H9K44_00890 PF13520 Amino acid permease H9K44_00895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K44_00895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K44_00895 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K44_00950 PF05230 MASE2 domain H9K44_00950 PF00990 Diguanylate cyclase, GGDEF domain H9K44_00955 PF12848 ABC transporter H9K44_00955 PF00005 ABC transporter H9K44_00960 PF07690 Major Facilitator Superfamily H9K44_00965 PF02954 Bacterial regulatory protein, Fis family H9K44_00970 PF01207 Dihydrouridine synthase (Dus) H9K44_00980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K44_00980 PF00289 Biotin carboxylase, N-terminal domain H9K44_00980 PF02785 Biotin carboxylase C-terminal domain H9K44_00985 PF00364 Biotin-requiring enzyme H9K44_00990 PF01220 Dehydroquinase class II H9K44_00995 PF16177 Acetyl-coenzyme A synthetase N-terminus H9K44_00995 PF00501 AMP-binding enzyme H9K44_00995 PF13193 AMP-binding enzyme C-terminal domain H9K44_01010 PF12832 MFS_1 like family H9K44_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_01015 PF00072 Response regulator receiver domain H9K44_01015 PF01627 Hpt domain H9K44_01015 PF00512 His Kinase A (phospho-acceptor) domain H9K44_01015 PF00672 HAMP domain H9K44_01020 PF00206 Lyase H9K44_01020 PF10415 Fumarase C C-terminus H9K44_01035 PF00474 Sodium:solute symporter family H9K44_01045 PF02080 TrkA-C domain H9K44_01045 PF00999 Sodium/hydrogen exchanger family H9K44_01045 PF03471 Transporter associated domain H9K44_01050 PF00072 Response regulator receiver domain H9K44_01050 PF00196 Bacterial regulatory proteins, luxR family H9K44_01055 PF02683 Cytochrome C biogenesis protein transmembrane region H9K44_01055 PF11412 Disulphide bond corrector protein DsbC H9K44_01060 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K44_01065 PF10415 Fumarase C C-terminus H9K44_01065 PF00206 Lyase H9K44_01070 PF04186 FxsA cytoplasmic membrane protein H9K44_01075 PF00588 SpoU rRNA Methylase family H9K44_01080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K44_01080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K44_01085 PF16527 Two-component sensor protein CpxA, periplasmic domain H9K44_01085 PF00672 HAMP domain H9K44_01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_01085 PF00512 His Kinase A (phospho-acceptor) domain H9K44_01090 PF00072 Response regulator receiver domain H9K44_01090 PF00486 Transcriptional regulatory protein, C terminal H9K44_01095 PF07813 LTXXQ motif family protein H9K44_01100 PF16916 Dimerisation domain of Zinc Transporter H9K44_01100 PF01545 Cation efflux family H9K44_01105 PF00365 Phosphofructokinase H9K44_01110 PF01554 MatE H9K44_01115 PF00166 Chaperonin 10 Kd subunit H9K44_01120 PF00118 TCP-1/cpn60 chaperonin family H9K44_01130 PF02308 MgtC family H9K44_01135 PF00842 Alanine racemase, C-terminal domain H9K44_01135 PF01168 Alanine racemase, N-terminal domain H9K44_01140 PF04055 Radical SAM superfamily H9K44_01145 PF01132 Elongation factor P (EF-P) OB domain H9K44_01145 PF08207 Elongation factor P (EF-P) KOW-like domain H9K44_01145 PF09285 Elongation factor P, C-terminal H9K44_01155 PF02313 Fumarate reductase subunit D H9K44_01160 PF02300 Fumarate reductase subunit C H9K44_01165 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K44_01165 PF13183 4Fe-4S dicluster domain H9K44_01170 PF00890 FAD binding domain H9K44_01170 PF02910 Fumarate reductase flavoprotein C-term H9K44_01175 PF00152 tRNA synthetases class II (D, K and N) H9K44_01185 PF08360 QacR-like protein, C-terminal region H9K44_01185 PF00440 Bacterial regulatory proteins, tetR family H9K44_01195 PF01551 Peptidase family M23 H9K44_01200 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_01200 PF06426 Serine acetyltransferase, N-terminal H9K44_01205 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H9K44_01205 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H9K44_01210 PF02556 Preprotein translocase subunit SecB H9K44_01215 PF00581 Rhodanese-like domain H9K44_01220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H9K44_01220 PF01676 Metalloenzyme superfamily H9K44_01230 PF00672 HAMP domain H9K44_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_01235 PF00939 Sodium:sulfate symporter transmembrane region H9K44_01240 PF02666 Phosphatidylserine decarboxylase H9K44_01245 PF03193 RsgA GTPase H9K44_01250 PF00929 Exonuclease H9K44_01320 PF08331 Domain of unknown function (DUF1730) H9K44_01325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H9K44_01330 PF01520 N-acetylmuramoyl-L-alanine amidase H9K44_01335 PF01119 DNA mismatch repair protein, C-terminal domain H9K44_01335 PF08676 MutL C terminal dimerisation domain H9K44_01345 PF17209 Hfq protein H9K44_01350 PF16360 GTP-binding GTPase Middle Region H9K44_01350 PF01926 50S ribosome-binding GTPase H9K44_01350 PF13167 GTP-binding GTPase N-terminal H9K44_01355 PF01145 SPFH domain / Band 7 family H9K44_01355 PF12221 Bacterial membrane protein N terminal H9K44_01360 PF01145 SPFH domain / Band 7 family H9K44_01365 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) H9K44_01370 PF00709 Adenylosuccinate synthetase H9K44_01375 PF08238 Sel1 repeat H9K44_01380 PF00175 Oxidoreductase NAD-binding domain H9K44_01380 PF00970 Oxidoreductase FAD-binding domain H9K44_01380 PF00042 Globin H9K44_01385 PF02082 Transcriptional regulator H9K44_01390 PF00575 S1 RNA binding domain H9K44_01390 PF00773 RNB domain H9K44_01390 PF08206 Ribonuclease B OB domain H9K44_01390 PF08461 Ribonuclease R winged-helix domain H9K44_01390 PF17876 Cold shock domain H9K44_01395 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K44_01395 PF00588 SpoU rRNA Methylase family H9K44_01400 PF13419 Haloacid dehalogenase-like hydrolase H9K44_01405 PF00579 tRNA synthetases class I (W and Y) H9K44_01420 PF00117 Glutamine amidotransferase class-I H9K44_01425 PF00202 Aminotransferase class-III H9K44_01430 PF04958 Arginine N-succinyltransferase beta subunit H9K44_01435 PF00171 Aldehyde dehydrogenase family H9K44_01445 PF00027 Cyclic nucleotide-binding domain H9K44_01445 PF13545 Crp-like helix-turn-helix domain H9K44_01450 PF00485 Phosphoribulokinase / Uridine kinase family H9K44_01455 PF06794 Uncharacterised protein family (UPF0270) H9K44_01460 PF00561 alpha/beta hydrolase fold H9K44_01470 PF00005 ABC transporter H9K44_01470 PF12848 ABC transporter H9K44_01475 PF02525 Flavodoxin-like fold H9K44_01480 PF02254 TrkA-N domain H9K44_01480 PF00999 Sodium/hydrogen exchanger family H9K44_01490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_01495 PF01112 Asparaginase H9K44_01500 PF04102 SlyX H9K44_01510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K44_01510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_01515 PF08348 YheO-like PAS domain H9K44_01515 PF13309 HTH domain H9K44_01520 PF02635 DsrE/DsrF-like family H9K44_01525 PF02635 DsrE/DsrF-like family H9K44_01530 PF04077 DsrH like protein H9K44_01535 PF00164 Ribosomal protein S12/S23 H9K44_01540 PF00177 Ribosomal protein S7p/S5e H9K44_01545 PF03144 Elongation factor Tu domain 2 H9K44_01545 PF00009 Elongation factor Tu GTP binding domain H9K44_01545 PF03764 Elongation factor G, domain IV H9K44_01545 PF00679 Elongation factor G C-terminus H9K44_01545 PF14492 Elongation Factor G, domain II H9K44_01550 PF03144 Elongation factor Tu domain 2 H9K44_01550 PF03143 Elongation factor Tu C-terminal domain H9K44_01550 PF00009 Elongation factor Tu GTP binding domain H9K44_01555 PF04324 BFD-like [2Fe-2S] binding domain H9K44_01560 PF00210 Ferritin-like domain H9K44_01565 PF03949 Malic enzyme, NAD binding domain H9K44_01565 PF00390 Malic enzyme, N-terminal domain H9K44_01570 PF01340 Met Apo-repressor, MetJ H9K44_01575 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K44_01580 PF00742 Homoserine dehydrogenase H9K44_01580 PF00696 Amino acid kinase family H9K44_01580 PF03447 Homoserine dehydrogenase, NAD binding domain H9K44_01585 PF02219 Methylenetetrahydrofolate reductase H9K44_01595 PF00311 Phosphoenolpyruvate carboxylase H9K44_01600 PF01546 Peptidase family M20/M25/M40 H9K44_01600 PF07687 Peptidase dimerisation domain H9K44_01605 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K44_01605 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K44_01610 PF00696 Amino acid kinase family H9K44_01615 PF00764 Arginosuccinate synthase H9K44_01620 PF00583 Acetyltransferase (GNAT) family H9K44_01620 PF00206 Lyase H9K44_01620 PF14698 Argininosuccinate lyase C-terminal H9K44_01630 PF08534 Redoxin H9K44_01630 PF00462 Glutaredoxin H9K44_01635 PF03466 LysR substrate binding domain H9K44_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_01640 PF17092 Penicillin-binding protein OB-like domain H9K44_01640 PF00912 Transglycosylase H9K44_01640 PF00905 Penicillin binding protein transpeptidase domain H9K44_01650 PF05137 Fimbrial assembly protein (PilN) H9K44_01660 PF04351 Pilus assembly protein, PilP H9K44_01665 PF00263 Bacterial type II and III secretion system protein H9K44_01665 PF11741 AMIN domain H9K44_01665 PF03958 Bacterial type II/III secretion system short domain H9K44_01665 PF07660 Secretin and TonB N terminus short domain H9K44_01670 PF01202 Shikimate kinase H9K44_01675 PF01761 3-dehydroquinate synthase H9K44_01685 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K44_01690 PF00834 Ribulose-phosphate 3 epimerase family H9K44_01695 PF01250 Ribosomal protein S6 H9K44_01700 PF00436 Single-strand binding protein family H9K44_01705 PF01084 Ribosomal protein S18 H9K44_01710 PF01281 Ribosomal protein L9, N-terminal domain H9K44_01710 PF03948 Ribosomal protein L9, C-terminal domain H9K44_01720 PF03796 DnaB-like helicase C terminal domain H9K44_01720 PF00772 DnaB-like helicase N terminal domain H9K44_01725 PF01168 Alanine racemase, N-terminal domain H9K44_01725 PF00842 Alanine racemase, C-terminal domain H9K44_01735 PF01894 Uncharacterised protein family UPF0047 H9K44_01740 PF00342 Phosphoglucose isomerase H9K44_01750 PF01475 Ferric uptake regulator family H9K44_01760 PF05713 Bacterial mobilisation protein (MobC) H9K44_01765 PF03432 Relaxase/Mobilisation nuclease domain H9K44_01795 PF02384 N-6 DNA Methylase H9K44_01795 PF12161 HsdM N-terminal domain H9K44_01805 PF12008 Type I restriction and modification enzyme - subunit R C terminal H9K44_01805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H9K44_01805 PF18766 SWI2/SNF2 ATPase H9K44_01835 PF00589 Phage integrase family H9K44_01840 PF01207 Dihydrouridine synthase (Dus) H9K44_01860 PF00667 FAD binding domain H9K44_01860 PF00258 Flavodoxin H9K44_01860 PF00175 Oxidoreductase NAD-binding domain H9K44_01865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K44_01865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K44_01870 PF01507 Phosphoadenosine phosphosulfate reductase family H9K44_01930 PF00999 Sodium/hydrogen exchanger family H9K44_01935 PF02574 Homocysteine S-methyltransferase H9K44_01935 PF02310 B12 binding domain H9K44_01935 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9K44_01935 PF02607 B12 binding domain H9K44_01935 PF00809 Pterin binding enzyme H9K44_01940 PF00696 Amino acid kinase family H9K44_01940 PF01842 ACT domain H9K44_01945 PF00266 Aminotransferase class-V H9K44_01955 PF17760 UvrA interaction domain H9K44_01955 PF17755 UvrA DNA-binding domain H9K44_01955 PF00005 ABC transporter H9K44_01960 PF00483 Nucleotidyl transferase H9K44_01965 PF00196 Bacterial regulatory proteins, luxR family H9K44_01970 PF00436 Single-strand binding protein family H9K44_01975 PF00563 EAL domain H9K44_01975 PF17157 Gammaproteobacterial periplasmic sensor domain H9K44_01975 PF00990 Diguanylate cyclase, GGDEF domain H9K44_01995 PF11741 AMIN domain H9K44_01995 PF00263 Bacterial type II and III secretion system protein H9K44_01995 PF03958 Bacterial type II/III secretion system short domain H9K44_01995 PF07660 Secretin and TonB N terminus short domain H9K44_02000 PF01471 Putative peptidoglycan binding domain H9K44_02000 PF13401 AAA domain H9K44_02010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K44_02010 PF00437 Type II/IV secretion system protein H9K44_02015 PF00482 Type II secretion system (T2SS), protein F H9K44_02025 PF07963 Prokaryotic N-terminal methylation motif H9K44_02065 PF04085 rod shape-determining protein MreC H9K44_02070 PF04093 rod shape-determining protein MreD H9K44_02075 PF02545 Maf-like protein H9K44_02080 PF10150 Ribonuclease E/G family H9K44_02080 PF00575 S1 RNA binding domain H9K44_02085 PF13502 AsmA-like C-terminal region H9K44_02085 PF13116 Protein of unknown function H9K44_02090 PF00795 Carbon-nitrogen hydrolase H9K44_02095 PF01523 Putative modulator of DNA gyrase H9K44_02100 PF13638 PIN domain H9K44_02100 PF02562 PhoH-like protein H9K44_02105 PF00271 Helicase conserved C-terminal domain H9K44_02105 PF12137 RNA polymerase recycling family C-terminal H9K44_02105 PF00176 SNF2 family N-terminal domain H9K44_02105 PF18339 RapA N-terminal Tudor like domain 1 H9K44_02105 PF18337 RapA N-terminal Tudor like domain H9K44_02115 PF00849 RNA pseudouridylate synthase H9K44_02120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K44_02120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K44_02125 PF04751 Protein of unknown function (DUF615) H9K44_02130 PF01523 Putative modulator of DNA gyrase H9K44_02135 PF03448 MgtE intracellular N domain H9K44_02135 PF00571 CBS domain H9K44_02135 PF01769 Divalent cation transporter H9K44_02140 PF00381 PTS HPr component phosphorylation site H9K44_02145 PF03668 P-loop ATPase protein family H9K44_02150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_02155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K44_02160 PF04552 Sigma-54, DNA binding domain H9K44_02160 PF04963 Sigma-54 factor, core binding domain H9K44_02160 PF00309 Sigma-54 factor, Activator interacting domain (AID) H9K44_02165 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K44_02165 PF00005 ABC transporter H9K44_02170 PF03968 OstA-like protein H9K44_02180 PF01380 SIS domain H9K44_02180 PF00571 CBS domain H9K44_02185 PF01699 Sodium/calcium exchanger protein H9K44_02190 PF00005 ABC transporter H9K44_02195 PF02405 Permease MlaE H9K44_02200 PF02470 MlaD protein H9K44_02205 PF05494 MlaC protein H9K44_02215 PF01722 BolA-like protein H9K44_02220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K44_02225 PF01553 Acyltransferase H9K44_02230 PF01042 Endoribonuclease L-PSP H9K44_02235 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain H9K44_02235 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain H9K44_02240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K44_02240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K44_02250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K44_02250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K44_02260 PF06877 Regulator of ribonuclease activity B H9K44_02270 PF00583 Acetyltransferase (GNAT) family H9K44_02280 PF08264 Anticodon-binding domain of tRNA H9K44_02280 PF00133 tRNA synthetases class I (I, L, M and V) H9K44_02280 PF10458 Valyl tRNA synthetase tRNA binding arm H9K44_02285 PF04364 DNA polymerase III chi subunit, HolC H9K44_02290 PF02789 Cytosol aminopeptidase family, N-terminal domain H9K44_02290 PF00883 Cytosol aminopeptidase family, catalytic domain H9K44_02295 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K44_02300 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K44_02310 PF10011 Predicted membrane protein (DUF2254) H9K44_02315 PF00106 short chain dehydrogenase H9K44_02435 PF02384 N-6 DNA Methylase H9K44_02440 PF07669 Eco57I restriction-modification methylase H9K44_02445 PF01522 Polysaccharide deacetylase H9K44_02450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_02455 PF02378 Phosphotransferase system, EIIC H9K44_02460 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H9K44_02465 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K44_02465 PF02056 Family 4 glycosyl hydrolase H9K44_02470 PF04794 YdjC-like protein H9K44_02475 PF00356 Bacterial regulatory proteins, lacI family H9K44_02475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K44_02480 PF00072 Response regulator receiver domain H9K44_02525 PF00171 Aldehyde dehydrogenase family H9K44_02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_02555 PF17200 Single Cache domain 2 H9K44_02555 PF00672 HAMP domain H9K44_02595 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9K44_02595 PF01464 Transglycosylase SLT domain H9K44_02600 PF04362 Bacterial Fe(2+) trafficking H9K44_02605 PF14815 NUDIX domain H9K44_02605 PF00633 Helix-hairpin-helix motif H9K44_02605 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K44_02610 PF02390 Putative methyltransferase H9K44_02615 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K44_02620 PF04960 Glutaminase H9K44_02625 PF04055 Radical SAM superfamily H9K44_02625 PF06969 HemN C-terminal domain H9K44_02630 PF01725 Ham1 family H9K44_02640 PF02594 Uncharacterised ACR, YggU family COG1872 H9K44_02645 PF02325 YGGT family H9K44_02650 PF14748 Pyrroline-5-carboxylate reductase dimerisation H9K44_02650 PF03807 NADP oxidoreductase coenzyme F420-dependent H9K44_02655 PF01168 Alanine racemase, N-terminal domain H9K44_02660 PF00437 Type II/IV secretion system protein H9K44_02665 PF00437 Type II/IV secretion system protein H9K44_02670 PF03652 Holliday junction resolvase H9K44_02675 PF02622 Uncharacterized ACR, COG1678 H9K44_02680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H9K44_02680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H9K44_02685 PF04452 RNA methyltransferase H9K44_02690 PF04231 Endonuclease I H9K44_02695 PF10263 SprT-like family H9K44_02695 PF17283 SprT-like zinc ribbon domain H9K44_02705 PF02772 S-adenosylmethionine synthetase, central domain H9K44_02705 PF00438 S-adenosylmethionine synthetase, N-terminal domain H9K44_02705 PF02773 S-adenosylmethionine synthetase, C-terminal domain H9K44_02710 PF00456 Transketolase, thiamine diphosphate binding domain H9K44_02710 PF02779 Transketolase, pyrimidine binding domain H9K44_02710 PF02780 Transketolase, C-terminal domain H9K44_02715 PF03466 LysR substrate binding domain H9K44_02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_02720 PF07715 TonB-dependent Receptor Plug Domain H9K44_02720 PF00593 TonB dependent receptor H9K44_02725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K44_02725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K44_02730 PF00162 Phosphoglycerate kinase H9K44_02735 PF01116 Fructose-bisphosphate aldolase class-II H9K44_02740 PF00924 Mechanosensitive ion channel H9K44_02740 PF05552 Conserved TM helix H9K44_02745 PF04073 Aminoacyl-tRNA editing domain H9K44_02750 PF01810 LysE type translocator H9K44_02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_02755 PF03466 LysR substrate binding domain H9K44_02760 PF04402 Protein of unknown function (DUF541) H9K44_02765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K44_02765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K44_02765 PF01842 ACT domain H9K44_02770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H9K44_02775 PF01812 5-formyltetrahydrofolate cyclo-ligase family H9K44_02785 PF05164 Cell division protein ZapA H9K44_02790 PF03695 Uncharacterised protein family (UPF0149) H9K44_02795 PF01494 FAD binding domain H9K44_02800 PF01494 FAD binding domain H9K44_02815 PF01571 Aminomethyltransferase folate-binding domain H9K44_02820 PF03937 Flavinator of succinate dehydrogenase H9K44_02825 PF00890 FAD binding domain H9K44_02825 PF02910 Fumarate reductase flavoprotein C-term H9K44_02830 PF08281 Sigma-70, region 4 H9K44_02830 PF04542 Sigma-70 region 2 H9K44_02835 PF03872 Anti sigma-E protein RseA, N-terminal domain H9K44_02835 PF03873 Anti sigma-E protein RseA, C-terminal domain H9K44_02840 PF17188 MucB/RseB C-terminal domain H9K44_02840 PF03888 MucB/RseB N-terminal domain H9K44_02850 PF00009 Elongation factor Tu GTP binding domain H9K44_02850 PF03144 Elongation factor Tu domain 2 H9K44_02850 PF06421 GTP-binding protein LepA C-terminus H9K44_02850 PF00679 Elongation factor G C-terminus H9K44_02855 PF10502 Signal peptidase, peptidase S26 H9K44_02860 PF00035 Double-stranded RNA binding motif H9K44_02860 PF14622 Ribonuclease-III-like H9K44_02865 PF01926 50S ribosome-binding GTPase H9K44_02865 PF07650 KH domain H9K44_02870 PF11967 Recombination protein O N terminal H9K44_02870 PF02565 Recombination protein O C terminal H9K44_02875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H9K44_02880 PF01648 4'-phosphopantetheinyl transferase superfamily H9K44_02885 PF00672 HAMP domain H9K44_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_02885 PF00512 His Kinase A (phospho-acceptor) domain H9K44_02885 PF01627 Hpt domain H9K44_02885 PF00072 Response regulator receiver domain H9K44_02885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K44_02890 PF05958 tRNA (Uracil-5-)-methyltransferase H9K44_02890 PF01938 TRAM domain H9K44_02895 PF02824 TGS domain H9K44_02895 PF13291 ACT domain H9K44_02895 PF04607 Region found in RelA / SpoT proteins H9K44_02900 PF03819 MazG nucleotide pyrophosphohydrolase domain H9K44_02905 PF06418 CTP synthase N-terminus H9K44_02905 PF00117 Glutamine amidotransferase class-I H9K44_02910 PF00113 Enolase, C-terminal TIM barrel domain H9K44_02910 PF03952 Enolase, N-terminal domain H9K44_02915 PF04977 Septum formation initiator H9K44_02920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9K44_02925 PF02542 YgbB family H9K44_02930 PF01142 tRNA pseudouridine synthase D (TruD) H9K44_02935 PF01975 Survival protein SurE H9K44_02945 PF01551 Peptidase family M23 H9K44_02945 PF01476 LysM domain H9K44_02950 PF04545 Sigma-70, region 4 H9K44_02950 PF00140 Sigma-70 factor, region 1.2 H9K44_02950 PF04539 Sigma-70 region 3 H9K44_02950 PF04542 Sigma-70 region 2 H9K44_02955 PF01624 MutS domain I H9K44_02955 PF05188 MutS domain II H9K44_02955 PF05192 MutS domain III H9K44_02955 PF05190 MutS family domain IV H9K44_02955 PF00488 MutS domain V H9K44_02960 PF02464 Competence-damaged protein H9K44_02965 PF00154 recA bacterial DNA recombination protein H9K44_02970 PF02631 RecX family H9K44_02975 PF01411 tRNA synthetases class II (A) H9K44_02975 PF02272 DHHA1 domain H9K44_02975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K44_02980 PF01842 ACT domain H9K44_02980 PF13840 ACT domain H9K44_02980 PF00696 Amino acid kinase family H9K44_02985 PF02599 Global regulator protein family H9K44_03040 PF04277 Oxaloacetate decarboxylase, gamma chain H9K44_03045 PF00364 Biotin-requiring enzyme H9K44_03045 PF00682 HMGL-like H9K44_03045 PF02436 Conserved carboxylase domain H9K44_03050 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit H9K44_03055 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_03055 PF00107 Zinc-binding dehydrogenase H9K44_03060 PF09335 SNARE associated Golgi protein H9K44_03065 PF05193 Peptidase M16 inactive domain H9K44_03065 PF00675 Insulinase (Peptidase family M16) H9K44_03070 PF04262 Glutamate-cysteine ligase H9K44_03080 PF02664 S-Ribosylhomocysteinase (LuxS) H9K44_03085 PF00571 CBS domain H9K44_03085 PF03471 Transporter associated domain H9K44_03085 PF01595 Cyclin M transmembrane N-terminal domain H9K44_03090 PF01578 Cytochrome C assembly protein H9K44_03095 PF02881 SRP54-type protein, helical bundle domain H9K44_03095 PF02978 Signal peptide binding domain H9K44_03095 PF00448 SRP54-type protein, GTPase domain H9K44_03100 PF00886 Ribosomal protein S16 H9K44_03105 PF05239 PRC-barrel domain H9K44_03105 PF01782 RimM N-terminal domain H9K44_03110 PF01746 tRNA (Guanine-1)-methyltransferase H9K44_03115 PF01245 Ribosomal protein L19 H9K44_03120 PF03884 DNA gyrase inhibitor YacG H9K44_03125 PF07072 Cell division protein H9K44_03130 PF01121 Dephospho-CoA kinase H9K44_03135 PF06750 Bacterial Peptidase A24 N-terminal domain H9K44_03135 PF01478 Type IV leader peptidase family H9K44_03140 PF00482 Type II secretion system (T2SS), protein F H9K44_03145 PF00437 Type II/IV secretion system protein H9K44_03145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K44_03150 PF07963 Prokaryotic N-terminal methylation motif H9K44_03150 PF00114 Pilin (bacterial filament) H9K44_03155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H9K44_03155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H9K44_03160 PF01510 N-acetylmuramoyl-L-alanine amidase H9K44_03165 PF00392 Bacterial regulatory proteins, gntR family H9K44_03165 PF07729 FCD domain H9K44_03170 PF17831 Pyruvate dehydrogenase E1 component middle domain H9K44_03170 PF00456 Transketolase, thiamine diphosphate binding domain H9K44_03175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K44_03175 PF00364 Biotin-requiring enzyme H9K44_03175 PF02817 e3 binding domain H9K44_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_03180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K44_03185 PF00440 Bacterial regulatory proteins, tetR family H9K44_03190 PF00156 Phosphoribosyl transferase domain H9K44_03195 PF00484 Carbonic anhydrase H9K44_03200 PF01740 STAS domain H9K44_03200 PF00916 Sulfate permease family H9K44_03205 PF00005 ABC transporter H9K44_03210 PF01061 ABC-2 type transporter H9K44_03215 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K44_03220 PF02569 Pantoate-beta-alanine ligase H9K44_03225 PF02548 Ketopantoate hydroxymethyltransferase H9K44_03230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K44_03235 PF01743 Poly A polymerase head domain H9K44_03235 PF12626 Polymerase A arginine-rich C-terminus H9K44_03235 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K44_03240 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K44_03245 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K44_03250 PF03749 Sugar fermentation stimulation protein RE domain H9K44_03250 PF17746 SfsA N-terminal OB domain H9K44_03255 PF00271 Helicase conserved C-terminal domain H9K44_03255 PF08482 ATP-dependent helicase C-terminal H9K44_03255 PF00270 DEAD/DEAH box helicase H9K44_03255 PF04408 Helicase associated domain (HA2) H9K44_03260 PF14814 Bifunctional transglycosylase second domain H9K44_03260 PF00905 Penicillin binding protein transpeptidase domain H9K44_03260 PF00912 Transglycosylase H9K44_03265 PF01734 Patatin-like phospholipase H9K44_03270 PF06434 Aconitate hydratase 2 N-terminus H9K44_03270 PF00330 Aconitase family (aconitate hydratase) H9K44_03270 PF11791 Aconitate B N-terminal domain H9K44_03275 PF06062 Uncharacterised protein family (UPF0231) H9K44_03280 PF00543 Nitrogen regulatory protein P-II H9K44_03285 PF00909 Ammonium Transporter Family H9K44_03290 PF13416 Bacterial extracellular solute-binding protein H9K44_03300 PF08402 TOBE domain H9K44_03300 PF00005 ABC transporter H9K44_03305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K44_03305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K44_03305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K44_03305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K44_03310 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H9K44_03310 PF06165 Glycosyltransferase family 36 H9K44_03315 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K44_03315 PF02838 Glycosyl hydrolase family 20, domain 2 H9K44_03320 PF01869 BadF/BadG/BcrA/BcrD ATPase family H9K44_03330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_03330 PF00005 ABC transporter H9K44_03335 PF00005 ABC transporter H9K44_03335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_03340 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_03340 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_03345 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_03350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_03355 PF00072 Response regulator receiver domain H9K44_03355 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_03355 PF00512 His Kinase A (phospho-acceptor) domain H9K44_03360 PF05175 Methyltransferase small domain H9K44_03360 PF08468 Methyltransferase small domain N-terminal H9K44_03365 PF01594 AI-2E family transporter H9K44_03370 PF00202 Aminotransferase class-III H9K44_03375 PF01521 Iron-sulphur cluster biosynthesis H9K44_03385 PF00873 AcrB/AcrD/AcrF family H9K44_03390 PF01551 Peptidase family M23 H9K44_03390 PF01476 LysM domain H9K44_03390 PF08525 Opacity-associated protein A N-terminal motif H9K44_03395 PF00579 tRNA synthetases class I (W and Y) H9K44_03405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H9K44_03410 PF13609 Gram-negative porin H9K44_03415 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K44_03415 PF03449 Transcription elongation factor, N-terminal H9K44_03420 PF01985 CRS1 / YhbY (CRM) domain H9K44_03425 PF01728 FtsJ-like methyltransferase H9K44_03430 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_03430 PF17862 AAA+ lid domain H9K44_03430 PF06480 FtsH Extracellular H9K44_03430 PF01434 Peptidase family M41 H9K44_03435 PF00809 Pterin binding enzyme H9K44_03440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K44_03440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K44_03440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K44_03440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K44_03445 PF03840 Preprotein translocase SecG subunit H9K44_03460 PF02576 RimP N-terminal domain H9K44_03460 PF17384 RimP C-terminal SH3 domain H9K44_03465 PF00575 S1 RNA binding domain H9K44_03465 PF08529 NusA N-terminal domain H9K44_03465 PF13184 NusA-like KH domain H9K44_03470 PF00009 Elongation factor Tu GTP binding domain H9K44_03470 PF11987 Translation-initiation factor 2 H9K44_03470 PF08364 Bacterial translation initiation factor IF-2 associated region H9K44_03470 PF04760 Translation initiation factor IF-2, N-terminal region H9K44_03475 PF02033 Ribosome-binding factor A H9K44_03480 PF01509 TruB family pseudouridylate synthase (N terminal domain) H9K44_03480 PF16198 tRNA pseudouridylate synthase B C-terminal domain H9K44_03480 PF09157 Pseudouridine synthase II TruB, C-terminal H9K44_03485 PF00312 Ribosomal protein S15 H9K44_03490 PF00013 KH domain H9K44_03490 PF01138 3' exoribonuclease family, domain 1 H9K44_03490 PF03725 3' exoribonuclease family, domain 2 H9K44_03490 PF00575 S1 RNA binding domain H9K44_03490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H9K44_03495 PF13181 Tetratricopeptide repeat H9K44_03495 PF07719 Tetratricopeptide repeat H9K44_03505 PF01554 MatE H9K44_03510 PF01136 Peptidase family U32 H9K44_03515 PF01136 Peptidase family U32 H9K44_03520 PF00563 EAL domain H9K44_03520 PF00990 Diguanylate cyclase, GGDEF domain H9K44_03520 PF03707 Bacterial signalling protein N terminal repeat H9K44_03525 PF02036 SCP-2 sterol transfer family H9K44_03530 PF13508 Acetyltransferase (GNAT) domain H9K44_03550 PF00009 Elongation factor Tu GTP binding domain H9K44_03550 PF03144 Elongation factor Tu domain 2 H9K44_03550 PF16658 Class II release factor RF3, C-terminal domain H9K44_03560 PF01026 TatD related DNase H9K44_03565 PF07662 Na+ dependent nucleoside transporter C-terminus H9K44_03565 PF01773 Na+ dependent nucleoside transporter N-terminus H9K44_03565 PF07670 Nucleoside recognition H9K44_03570 PF01791 DeoC/LacD family aldolase H9K44_03575 PF02885 Glycosyl transferase family, helical bundle domain H9K44_03575 PF00591 Glycosyl transferase family, a/b domain H9K44_03575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H9K44_03580 PF01676 Metalloenzyme superfamily H9K44_03585 PF01048 Phosphorylase superfamily H9K44_03595 PF18429 Domain of unknown function (DUF5609) H9K44_03605 PF18073 Rubredoxin metal binding domain H9K44_03610 PF03764 Elongation factor G, domain IV H9K44_03610 PF00009 Elongation factor Tu GTP binding domain H9K44_03610 PF14492 Elongation Factor G, domain II H9K44_03610 PF03144 Elongation factor Tu domain 2 H9K44_03610 PF00679 Elongation factor G C-terminus H9K44_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_03615 PF03466 LysR substrate binding domain H9K44_03625 PF00501 AMP-binding enzyme H9K44_03655 PF00196 Bacterial regulatory proteins, luxR family H9K44_03660 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9K44_03660 PF01464 Transglycosylase SLT domain H9K44_03665 PF03466 LysR substrate binding domain H9K44_03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_03685 PF00263 Bacterial type II and III secretion system protein H9K44_03685 PF04972 BON domain H9K44_03685 PF13629 Pilus formation protein N terminal region H9K44_03700 PF00437 Type II/IV secretion system protein H9K44_03735 PF00691 OmpA family H9K44_03735 PF05736 OprF membrane domain H9K44_03750 PF03466 LysR substrate binding domain H9K44_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_03755 PF13520 Amino acid permease H9K44_03760 PF04074 YhcH/YjgK/YiaL H9K44_03765 PF16353 Domain of unknown function(DUF4981) H9K44_03765 PF00703 Glycosyl hydrolases family 2 H9K44_03765 PF02929 Beta galactosidase small chain H9K44_03765 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K44_03765 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K44_03770 PF00356 Bacterial regulatory proteins, lacI family H9K44_03775 PF16363 GDP-mannose 4,6 dehydratase H9K44_03780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9K44_03780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9K44_03785 PF08544 GHMP kinases C terminal H9K44_03785 PF00288 GHMP kinases N terminal domain H9K44_03785 PF10509 Galactokinase galactose-binding signature H9K44_03790 PF01263 Aldose 1-epimerase H9K44_03795 PF00474 Sodium:solute symporter family H9K44_03805 PF02811 PHP domain H9K44_03805 PF14579 Helix-hairpin-helix motif H9K44_03805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K44_03805 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K44_03805 PF00929 Exonuclease H9K44_03810 PF00356 Bacterial regulatory proteins, lacI family H9K44_03815 PF01588 Putative tRNA binding domain H9K44_03835 PF01544 CorA-like Mg2+ transporter protein H9K44_03840 PF01266 FAD dependent oxidoreductase H9K44_03840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H9K44_03845 PF08220 DeoR-like helix-turn-helix domain H9K44_03845 PF00455 DeoR C terminal sensor domain H9K44_03850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K44_03850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K44_03855 PF00230 Major intrinsic protein H9K44_03860 PF07690 Major Facilitator Superfamily H9K44_03865 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K44_03870 PF14602 Hexapeptide repeat of succinyl-transferase H9K44_03870 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H9K44_03875 PF07130 YebG protein H9K44_03880 PF03466 LysR substrate binding domain H9K44_03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_03890 PF00884 Sulfatase H9K44_03890 PF11893 Domain of unknown function (DUF3413) H9K44_03895 PF17946 RecC C-terminal domain H9K44_03900 PF12705 PD-(D/E)XK nuclease superfamily H9K44_03900 PF13361 UvrD-like helicase C-terminal domain H9K44_03900 PF00580 UvrD/REP helicase N-terminal domain H9K44_03905 PF13538 UvrD-like helicase C-terminal domain H9K44_03915 PF00696 Amino acid kinase family H9K44_03915 PF00583 Acetyltransferase (GNAT) family H9K44_03925 PF03562 MltA specific insert domain H9K44_03925 PF06725 3D domain H9K44_03930 PF00899 ThiF family H9K44_03935 PF02657 Fe-S metabolism associated domain H9K44_03940 PF17158 Membrane-associated sensor, integral membrane domain H9K44_03940 PF00990 Diguanylate cyclase, GGDEF domain H9K44_03945 PF00266 Aminotransferase class-V H9K44_03950 PF01965 DJ-1/PfpI family H9K44_03955 PF08546 Ketopantoate reductase PanE/ApbA C terminal H9K44_03955 PF02558 Ketopantoate reductase PanE/ApbA H9K44_03960 PF03502 Nucleoside-specific channel-forming protein, Tsx H9K44_03980 PF04542 Sigma-70 region 2 H9K44_03980 PF04545 Sigma-70, region 4 H9K44_03990 PF07690 Major Facilitator Superfamily H9K44_03995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K44_04000 PF03923 Uncharacterized lipoprotein H9K44_04000 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K44_04005 PF05175 Methyltransferase small domain H9K44_04010 PF01722 BolA-like protein H9K44_04015 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) H9K44_04015 PF11973 NQRA C-terminal domain H9K44_04020 PF03116 NQR2, RnfD, RnfE family H9K44_04025 PF04205 FMN-binding domain H9K44_04030 PF02508 Rnf-Nqr subunit, membrane protein H9K44_04035 PF02508 Rnf-Nqr subunit, membrane protein H9K44_04040 PF00970 Oxidoreductase FAD-binding domain H9K44_04040 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_04040 PF00175 Oxidoreductase NAD-binding domain H9K44_04045 PF02424 ApbE family H9K44_04060 PF11799 impB/mucB/samB family C-terminal domain H9K44_04060 PF00817 impB/mucB/samB family H9K44_04060 PF11798 IMS family HHH motif H9K44_04065 PF00270 DEAD/DEAH box helicase H9K44_04065 PF00271 Helicase conserved C-terminal domain H9K44_04065 PF00570 HRDC domain H9K44_04065 PF16124 RecQ zinc-binding H9K44_04065 PF09382 RQC domain H9K44_04070 PF03449 Transcription elongation factor, N-terminal H9K44_04070 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K44_04085 PF00209 Sodium:neurotransmitter symporter family H9K44_04095 PF06786 Uncharacterised protein family (UPF0253) H9K44_04105 PF04073 Aminoacyl-tRNA editing domain H9K44_04105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K44_04105 PF03129 Anticodon binding domain H9K44_04110 PF18389 TrmO C-terminal domain H9K44_04110 PF01980 tRNA-methyltransferase O H9K44_04115 PF01197 Ribosomal protein L31 H9K44_04120 PF00444 Ribosomal protein L36 H9K44_04125 PF03806 AbgT putative transporter family H9K44_04130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H9K44_04155 PF04287 tRNA pseudouridine synthase C H9K44_04160 PF00849 RNA pseudouridylate synthase H9K44_04165 PF11944 Protein of unknown function (DUF3461) H9K44_04170 PF08335 GlnD PII-uridylyltransferase H9K44_04170 PF01842 ACT domain H9K44_04170 PF01909 Nucleotidyltransferase domain H9K44_04170 PF01966 HD domain H9K44_04175 PF00557 Metallopeptidase family M24 H9K44_04180 PF00318 Ribosomal protein S2 H9K44_04185 PF00889 Elongation factor TS H9K44_04190 PF00696 Amino acid kinase family H9K44_04195 PF01765 Ribosome recycling factor H9K44_04200 PF01255 Putative undecaprenyl diphosphate synthase H9K44_04210 PF13288 DXP reductoisomerase C-terminal domain H9K44_04210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H9K44_04210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H9K44_04215 PF17820 PDZ domain H9K44_04215 PF02163 Peptidase family M50 H9K44_04220 PF01103 Surface antigen H9K44_04220 PF07244 Surface antigen variable number repeat H9K44_04225 PF03938 Outer membrane protein (OmpH-like) H9K44_04230 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_04230 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H9K44_04235 PF07977 FabA-like domain H9K44_04240 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_04240 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H9K44_04245 PF02684 Lipid-A-disaccharide synthetase H9K44_04250 PF01351 Ribonuclease HII H9K44_04255 PF01336 OB-fold nucleic acid binding domain H9K44_04255 PF02811 PHP domain H9K44_04255 PF14579 Helix-hairpin-helix motif H9K44_04255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K44_04255 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K44_04260 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H9K44_04265 PF11734 TilS substrate C-terminal domain H9K44_04265 PF01171 PP-loop family H9K44_04265 PF09179 TilS substrate binding domain H9K44_04270 PF00034 Cytochrome c H9K44_04275 PF00543 Nitrogen regulatory protein P-II H9K44_04280 PF03372 Endonuclease/Exonuclease/phosphatase family H9K44_04290 PF01476 LysM domain H9K44_04290 PF01464 Transglycosylase SLT domain H9K44_04295 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9K44_04295 PF00753 Metallo-beta-lactamase superfamily H9K44_04300 PF08241 Methyltransferase domain H9K44_04305 PF00075 RNase H H9K44_04310 PF00929 Exonuclease H9K44_04320 PF00916 Sulfate permease family H9K44_04320 PF01740 STAS domain H9K44_04325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_04325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_04325 PF09317 Domain of unknown function (DUF1974) H9K44_04325 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_04330 PF13580 SIS domain H9K44_04335 PF13230 Glutamine amidotransferases class-II H9K44_04340 PF00950 ABC 3 transport family H9K44_04345 PF00005 ABC transporter H9K44_04350 PF01297 Zinc-uptake complex component A periplasmic H9K44_04355 PF02311 AraC-like ligand binding domain H9K44_04355 PF12833 Helix-turn-helix domain H9K44_04360 PF04023 FeoA domain H9K44_04365 PF07664 Ferrous iron transport protein B C terminus H9K44_04365 PF17910 FeoB cytosolic helical domain H9K44_04365 PF02421 Ferrous iron transport protein B H9K44_04365 PF07670 Nucleoside recognition H9K44_04380 PF00750 tRNA synthetases class I (R) H9K44_04380 PF05746 DALR anticodon binding domain H9K44_04380 PF03485 Arginyl tRNA synthetase N terminal domain H9K44_04385 PF06185 YecM protein H9K44_04390 PF00551 Formyl transferase H9K44_04390 PF01842 ACT domain H9K44_04395 PF04851 Type III restriction enzyme, res subunit H9K44_04395 PF13307 Helicase C-terminal domain H9K44_04400 PF00814 Glycoprotease family H9K44_04415 PF00561 alpha/beta hydrolase fold H9K44_04420 PF00501 AMP-binding enzyme H9K44_04420 PF13193 AMP-binding enzyme C-terminal domain H9K44_04425 PF01612 3'-5' exonuclease H9K44_04425 PF00570 HRDC domain H9K44_04430 PF03776 Septum formation topological specificity factor MinE H9K44_04435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9K44_04440 PF05209 Septum formation inhibitor MinC, N-terminal domain H9K44_04440 PF03775 Septum formation inhibitor MinC, C-terminal domain H9K44_04445 PF05166 YcgL domain H9K44_04450 PF13406 Transglycosylase SLT domain H9K44_04455 PF03466 LysR substrate binding domain H9K44_04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_04460 PF07670 Nucleoside recognition H9K44_04460 PF07662 Na+ dependent nucleoside transporter C-terminus H9K44_04460 PF01773 Na+ dependent nucleoside transporter N-terminus H9K44_04465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H9K44_04465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H9K44_04485 PF06508 Queuosine biosynthesis protein QueC H9K44_04530 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K44_04530 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K44_04540 PF07977 FabA-like domain H9K44_04545 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K44_04545 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K44_04570 PF00221 Aromatic amino acid lyase H9K44_04575 PF00535 Glycosyl transferase family 2 H9K44_04580 PF07977 FabA-like domain H9K44_04595 PF00550 Phosphopantetheine attachment site H9K44_04600 PF00550 Phosphopantetheine attachment site H9K44_04625 PF04820 Tryptophan halogenase H9K44_04635 PF01595 Cyclin M transmembrane N-terminal domain H9K44_04635 PF03471 Transporter associated domain H9K44_04635 PF00571 CBS domain H9K44_04640 PF00270 DEAD/DEAH box helicase H9K44_04640 PF00271 Helicase conserved C-terminal domain H9K44_04645 PF02080 TrkA-C domain H9K44_04645 PF02254 TrkA-N domain H9K44_04650 PF02386 Cation transport protein H9K44_04665 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H9K44_04670 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K44_04675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K44_04680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K44_04690 PF02954 Bacterial regulatory protein, Fis family H9K44_04690 PF00072 Response regulator receiver domain H9K44_04690 PF00158 Sigma-54 interaction domain H9K44_04695 PF00512 His Kinase A (phospho-acceptor) domain H9K44_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_04695 PF02743 Cache domain H9K44_04705 PF05698 Bacterial trigger factor protein (TF) C-terminus H9K44_04705 PF05697 Bacterial trigger factor protein (TF) H9K44_04705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_04710 PF00574 Clp protease H9K44_04715 PF06689 ClpX C4-type zinc finger H9K44_04715 PF10431 C-terminal, D2-small domain, of ClpB protein H9K44_04715 PF07724 AAA domain (Cdc48 subfamily) H9K44_04720 PF02190 ATP-dependent protease La (LON) substrate-binding domain H9K44_04720 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_04720 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K44_04725 PF00216 Bacterial DNA-binding protein H9K44_04730 PF13145 PPIC-type PPIASE domain H9K44_04750 PF01966 HD domain H9K44_04750 PF13286 Phosphohydrolase-associated domain H9K44_04760 PF00155 Aminotransferase class I and II H9K44_04765 PF00425 chorismate binding enzyme H9K44_04770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K44_04770 PF16582 Middle domain of thiamine pyrophosphate H9K44_04770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K44_04775 PF12697 Alpha/beta hydrolase family H9K44_04780 PF00378 Enoyl-CoA hydratase/isomerase H9K44_04785 PF13378 Enolase C-terminal domain-like H9K44_04790 PF00501 AMP-binding enzyme H9K44_04790 PF13193 AMP-binding enzyme C-terminal domain H9K44_04800 PF03601 Conserved hypothetical protein 698 H9K44_04805 PF07690 Major Facilitator Superfamily H9K44_04850 PF13533 Biotin-lipoyl like H9K44_04855 PF00873 AcrB/AcrD/AcrF family H9K44_04875 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_04880 PF13404 AsnC-type helix-turn-helix domain H9K44_04880 PF01037 Lrp/AsnC ligand binding domain H9K44_04895 PF09619 Type III secretion system lipoprotein chaperone (YscW) H9K44_04900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K44_04910 PF17152 Periplasmic sensor domain H9K44_04910 PF00990 Diguanylate cyclase, GGDEF domain H9K44_04920 PF00588 SpoU rRNA Methylase family H9K44_04920 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K44_04925 PF11953 Domain of unknown function (DUF3470) H9K44_04925 PF00037 4Fe-4S binding domain H9K44_04935 PF00571 CBS domain H9K44_04935 PF00478 IMP dehydrogenase / GMP reductase domain H9K44_04940 PF00403 Heavy-metal-associated domain H9K44_04945 PF01048 Phosphorylase superfamily H9K44_04955 PF00672 HAMP domain H9K44_04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_04960 PF01230 HIT domain H9K44_04975 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K44_04975 PF13036 Peptidoglycan-synthase activator LpoB H9K44_04985 PF05728 Uncharacterised protein family (UPF0227) H9K44_04990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_05005 PF00271 Helicase conserved C-terminal domain H9K44_05005 PF02559 CarD-like/TRCF domain H9K44_05005 PF00270 DEAD/DEAH box helicase H9K44_05005 PF03461 TRCF domain H9K44_05005 PF17757 UvrB interaction domain H9K44_05015 PF02687 FtsX-like permease family H9K44_05015 PF12704 MacB-like periplasmic core domain H9K44_05020 PF00005 ABC transporter H9K44_05025 PF02687 FtsX-like permease family H9K44_05025 PF12704 MacB-like periplasmic core domain H9K44_05035 PF13567 Domain of unknown function (DUF4131) H9K44_05035 PF00753 Metallo-beta-lactamase superfamily H9K44_05035 PF03772 Competence protein H9K44_05040 PF00664 ABC transporter transmembrane region H9K44_05040 PF00005 ABC transporter H9K44_05045 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H9K44_05050 PF03966 Trm112p-like protein H9K44_05055 PF02348 Cytidylyltransferase H9K44_05060 PF04293 SpoVR like protein H9K44_05065 PF04285 Protein of unknown function (DUF444) H9K44_05070 PF08298 PrkA AAA domain H9K44_05070 PF06798 PrkA serine protein kinase C-terminal domain H9K44_05075 PF03887 YfbU domain H9K44_05085 PF04055 Radical SAM superfamily H9K44_05095 PF01228 Glycine radical H9K44_05095 PF02901 Pyruvate formate lyase-like H9K44_05110 PF00005 ABC transporter H9K44_05115 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_05120 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_05125 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_05135 PF03372 Endonuclease/Exonuclease/phosphatase family H9K44_05140 PF10689 Protein of unknown function (DUF2496) H9K44_05145 PF07445 Primosomal replication protein priC H9K44_05150 PF01925 Sulfite exporter TauE/SafE H9K44_05155 PF13307 Helicase C-terminal domain H9K44_05155 PF06733 DEAD_2 H9K44_05165 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K44_05170 PF00849 RNA pseudouridylate synthase H9K44_05175 PF03971 Monomeric isocitrate dehydrogenase H9K44_05180 PF00313 'Cold-shock' DNA-binding domain H9K44_05185 PF02617 ATP-dependent Clp protease adaptor protein ClpS H9K44_05190 PF10431 C-terminal, D2-small domain, of ClpB protein H9K44_05190 PF02861 Clp amino terminal domain, pathogenicity island component H9K44_05190 PF07724 AAA domain (Cdc48 subfamily) H9K44_05190 PF17871 AAA lid domain H9K44_05190 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_05200 PF01176 Translation initiation factor 1A / IF-1 H9K44_05205 PF04376 Arginine-tRNA-protein transferase, N terminus H9K44_05205 PF04377 Arginine-tRNA-protein transferase, C terminus H9K44_05210 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H9K44_05220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K44_05225 PF10692 Protein of unknown function (DUF2498) H9K44_05230 PF08272 Topoisomerase I zinc-ribbon-like H9K44_05230 PF01131 DNA topoisomerase H9K44_05230 PF01396 Topoisomerase DNA binding C4 zinc finger H9K44_05230 PF01751 Toprim domain H9K44_05235 PF00483 Nucleotidyl transferase H9K44_05240 PF08323 Starch synthase catalytic domain H9K44_05240 PF00534 Glycosyl transferases group 1 H9K44_05260 PF04994 TfoX C-terminal domain H9K44_05260 PF04993 TfoX N-terminal domain H9K44_05265 PF00356 Bacterial regulatory proteins, lacI family H9K44_05270 PF02613 Nitrate reductase delta subunit H9K44_05275 PF00486 Transcriptional regulatory protein, C terminal H9K44_05275 PF00072 Response regulator receiver domain H9K44_05280 PF02698 DUF218 domain H9K44_05285 PF13847 Methyltransferase domain H9K44_05290 PF17193 MukF C-terminal domain H9K44_05290 PF17192 MukF middle domain H9K44_05290 PF03882 MukF winged-helix domain H9K44_05295 PF04288 MukE-like family H9K44_05300 PF04310 MukB N-terminal H9K44_05300 PF16330 MukB hinge domain H9K44_05310 PF08443 RimK-like ATP-grasp domain H9K44_05310 PF18030 RimK PreATP-grasp domain H9K44_05320 PF18030 RimK PreATP-grasp domain H9K44_05320 PF08443 RimK-like ATP-grasp domain H9K44_05325 PF08003 Protein of unknown function (DUF1698) H9K44_05330 PF13649 Methyltransferase domain H9K44_05335 PF01904 Protein of unknown function DUF72 H9K44_05340 PF02938 GAD domain H9K44_05340 PF00152 tRNA synthetases class II (D, K and N) H9K44_05340 PF01336 OB-fold nucleic acid binding domain H9K44_05345 PF02075 Crossover junction endodeoxyribonuclease RuvC H9K44_05350 PF00672 HAMP domain H9K44_05350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_05350 PF02203 Tar ligand binding domain homologue H9K44_05355 PF01330 RuvA N terminal domain H9K44_05355 PF07499 RuvA, C-terminal domain H9K44_05360 PF05496 Holliday junction DNA helicase RuvB P-loop domain H9K44_05360 PF05491 RuvB C-terminal winged helix domain H9K44_05360 PF17864 RuvB AAA lid domain H9K44_05365 PF01654 Cytochrome bd terminal oxidase subunit I H9K44_05370 PF02322 Cytochrome bd terminal oxidase subunit II H9K44_05375 PF08173 Membrane bound YbgT-like protein H9K44_05385 PF03061 Thioesterase superfamily H9K44_05390 PF01618 MotA/TolQ/ExbB proton channel family H9K44_05395 PF02472 Biopolymer transport protein ExbD/TolR H9K44_05405 PF07676 WD40-like Beta Propeller Repeat H9K44_05405 PF04052 TolB amino-terminal domain H9K44_05410 PF00691 OmpA family H9K44_05415 PF16331 TolA binding protein trimerisation H9K44_05415 PF13174 Tetratricopeptide repeat H9K44_05420 PF02445 Quinolinate synthetase A protein H9K44_05430 PF03994 Domain of Unknown Function (DUF350) H9K44_05440 PF03738 Glutathionylspermidine synthase preATP-grasp H9K44_05450 PF00072 Response regulator receiver domain H9K44_05450 PF09308 LuxQ, periplasmic H9K44_05450 PF00512 His Kinase A (phospho-acceptor) domain H9K44_05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_05455 PF06610 L-alanine exporter H9K44_05465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_05465 PF00672 HAMP domain H9K44_05465 PF12729 Four helix bundle sensory module for signal transduction H9K44_05470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_05470 PF00529 HlyD membrane-fusion protein of T1SS H9K44_05475 PF00873 AcrB/AcrD/AcrF family H9K44_05490 PF00579 tRNA synthetases class I (W and Y) H9K44_05500 PF03372 Endonuclease/Exonuclease/phosphatase family H9K44_05505 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H9K44_05515 PF03466 LysR substrate binding domain H9K44_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_05525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K44_05525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K44_05530 PF01037 Lrp/AsnC ligand binding domain H9K44_05535 PF17854 FtsK alpha domain H9K44_05535 PF09397 Ftsk gamma domain H9K44_05535 PF01580 FtsK/SpoIIIE family H9K44_05535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H9K44_05540 PF03548 Outer membrane lipoprotein carrier protein LolA H9K44_05545 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_05545 PF12002 MgsA AAA+ ATPase C terminal H9K44_05545 PF16193 AAA C-terminal domain H9K44_05550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K44_05550 PF02403 Seryl-tRNA synthetase N-terminal domain H9K44_05565 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K44_05570 PF00202 Aminotransferase class-III H9K44_05575 PF06968 Biotin and Thiamin Synthesis associated domain H9K44_05575 PF04055 Radical SAM superfamily H9K44_05580 PF00155 Aminotransferase class I and II H9K44_05585 PF08241 Methyltransferase domain H9K44_05600 PF01435 Peptidase family M48 H9K44_05610 PF00106 short chain dehydrogenase H9K44_05645 PF08328 Adenylosuccinate lyase C-terminal H9K44_05645 PF00206 Lyase H9K44_05650 PF04356 Protein of unknown function (DUF489) H9K44_05665 PF00294 pfkB family carbohydrate kinase H9K44_05670 PF00816 H-NS histone family H9K44_05675 PF03553 Na+/H+ antiporter family H9K44_05685 PF02954 Bacterial regulatory protein, Fis family H9K44_05685 PF00072 Response regulator receiver domain H9K44_05685 PF00158 Sigma-54 interaction domain H9K44_05690 PF01634 ATP phosphoribosyltransferase H9K44_05690 PF08029 HisG, C-terminal domain H9K44_05695 PF00815 Histidinol dehydrogenase H9K44_05700 PF00155 Aminotransferase class I and II H9K44_05705 PF00475 Imidazoleglycerol-phosphate dehydratase H9K44_05705 PF08645 Polynucleotide kinase 3 phosphatase H9K44_05710 PF00117 Glutamine amidotransferase class-I H9K44_05715 PF00977 Histidine biosynthesis protein H9K44_05720 PF00977 Histidine biosynthesis protein H9K44_05725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H9K44_05725 PF01502 Phosphoribosyl-AMP cyclohydrolase H9K44_05730 PF02810 SEC-C motif H9K44_05735 PF08668 HDOD domain H9K44_05735 PF00563 EAL domain H9K44_05740 PF00149 Calcineurin-like phosphoesterase H9K44_05745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K44_05750 PF09190 DALR domain H9K44_05750 PF01406 tRNA synthetases class I (C) catalytic domain H9K44_05755 PF00265 Thymidine kinase H9K44_05760 PF02698 DUF218 domain H9K44_05785 PF01226 Formate/nitrite transporter H9K44_05795 PF03649 Uncharacterised protein family (UPF0014) H9K44_05800 PF06796 Periplasmic nitrate reductase protein NapE H9K44_05805 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K44_05810 PF00384 Molybdopterin oxidoreductase H9K44_05810 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K44_05810 PF01568 Molydopterin dinucleotide binding domain H9K44_05815 PF16874 Glycosyl hydrolase family 36 C-terminal domain H9K44_05815 PF16875 Glycosyl hydrolase family 36 N-terminal domain H9K44_05825 PF02833 DHHA2 domain H9K44_05825 PF01368 DHH family H9K44_05835 PF00005 ABC transporter H9K44_05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_05840 PF00005 ABC transporter H9K44_05845 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_05845 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_05850 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_05855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_05860 PF00158 Sigma-54 interaction domain H9K44_05860 PF02954 Bacterial regulatory protein, Fis family H9K44_05865 PF04012 PspA/IM30 family H9K44_05870 PF06667 Phage shock protein B H9K44_05875 PF04024 PspC domain H9K44_05880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_05885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_05890 PF00873 AcrB/AcrD/AcrF family H9K44_05895 PF00117 Glutamine amidotransferase class-I H9K44_05895 PF03352 Methyladenine glycosylase H9K44_05895 PF13673 Acetyltransferase (GNAT) domain H9K44_05895 PF00958 GMP synthase C terminal domain H9K44_05895 PF13302 Acetyltransferase (GNAT) domain H9K44_05900 PF03280 Proteobacterial lipase chaperone protein H9K44_05905 PF00561 alpha/beta hydrolase fold H9K44_05910 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K44_05915 PF13091 PLD-like domain H9K44_05915 PF13396 Phospholipase_D-nuclease N-terminal H9K44_05920 PF00209 Sodium:neurotransmitter symporter family H9K44_05925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_05925 PF12729 Four helix bundle sensory module for signal transduction H9K44_05925 PF00672 HAMP domain H9K44_05930 PF00849 RNA pseudouridylate synthase H9K44_05940 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_05940 PF00175 Oxidoreductase NAD-binding domain H9K44_05940 PF00970 Oxidoreductase FAD-binding domain H9K44_05945 PF03063 Prismane/CO dehydrogenase family H9K44_05950 PF01590 GAF domain H9K44_05950 PF00158 Sigma-54 interaction domain H9K44_05960 PF01066 CDP-alcohol phosphatidyltransferase H9K44_05965 PF00005 ABC transporter H9K44_05970 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_05975 PF13416 Bacterial extracellular solute-binding protein H9K44_05980 PF09335 SNARE associated Golgi protein H9K44_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_05990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K44_06000 PF00512 His Kinase A (phospho-acceptor) domain H9K44_06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_06005 PF00196 Bacterial regulatory proteins, luxR family H9K44_06005 PF00072 Response regulator receiver domain H9K44_06015 PF06945 Protein of unknown function (DUF1289) H9K44_06025 PF02872 5'-nucleotidase, C-terminal domain H9K44_06025 PF00149 Calcineurin-like phosphoesterase H9K44_06040 PF01386 Ribosomal L25p family H9K44_06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_06050 PF00072 Response regulator receiver domain H9K44_06050 PF00486 Transcriptional regulatory protein, C terminal H9K44_06060 PF00271 Helicase conserved C-terminal domain H9K44_06060 PF04851 Type III restriction enzyme, res subunit H9K44_06065 PF00849 RNA pseudouridylate synthase H9K44_06065 PF01479 S4 domain H9K44_06070 PF07690 Major Facilitator Superfamily H9K44_06085 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) H9K44_06100 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K44_06105 PF13460 NAD(P)H-binding H9K44_06105 PF11066 Protein of unknown function (DUF2867) H9K44_06110 PF01554 MatE H9K44_06115 PF00005 ABC transporter H9K44_06130 PF06965 Na+/H+ antiporter 1 H9K44_06135 PF16295 Tetracyclin repressor-like, C-terminal domain H9K44_06135 PF00440 Bacterial regulatory proteins, tetR family H9K44_06140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_06140 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_06140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_06140 PF09317 Domain of unknown function (DUF1974) H9K44_06145 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K44_06145 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K44_06145 PF07055 Enoyl reductase FAD binding domain H9K44_06150 PF02080 TrkA-C domain H9K44_06150 PF06826 Predicted Permease Membrane Region H9K44_06155 PF00462 Glutaredoxin H9K44_06160 PF00465 Iron-containing alcohol dehydrogenase H9K44_06165 PF01380 SIS domain H9K44_06165 PF01418 Helix-turn-helix domain, rpiR family H9K44_06170 PF00282 Pyridoxal-dependent decarboxylase conserved domain H9K44_06180 PF03956 Lysine exporter LysO H9K44_06190 PF04994 TfoX C-terminal domain H9K44_06190 PF04993 TfoX N-terminal domain H9K44_06205 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_06205 PF00512 His Kinase A (phospho-acceptor) domain H9K44_06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_06215 PF00266 Aminotransferase class-V H9K44_06220 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_06225 PF00005 ABC transporter H9K44_06225 PF00664 ABC transporter transmembrane region H9K44_06230 PF00005 ABC transporter H9K44_06230 PF00664 ABC transporter transmembrane region H9K44_06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_06245 PF00266 Aminotransferase class-V H9K44_06255 PF00990 Diguanylate cyclase, GGDEF domain H9K44_06255 PF00072 Response regulator receiver domain H9K44_06260 PF00939 Sodium:sulfate symporter transmembrane region H9K44_06265 PF02698 DUF218 domain H9K44_06270 PF03949 Malic enzyme, NAD binding domain H9K44_06270 PF00390 Malic enzyme, N-terminal domain H9K44_06275 PF04408 Helicase associated domain (HA2) H9K44_06275 PF00270 DEAD/DEAH box helicase H9K44_06275 PF00271 Helicase conserved C-terminal domain H9K44_06275 PF08482 ATP-dependent helicase C-terminal H9K44_06280 PF02253 Phospholipase A1 H9K44_06290 PF09423 PhoD-like phosphatase H9K44_06290 PF16655 PhoD-like phosphatase, N-terminal domain H9K44_06295 PF01259 SAICAR synthetase H9K44_06315 PF05736 OprF membrane domain H9K44_06315 PF00691 OmpA family H9K44_06330 PF01565 FAD binding domain H9K44_06330 PF02913 FAD linked oxidases, C-terminal domain H9K44_06330 PF13183 4Fe-4S dicluster domain H9K44_06335 PF04191 Phospholipid methyltransferase H9K44_06345 PF00221 Aromatic amino acid lyase H9K44_06350 PF17392 Urocanase C-terminal domain H9K44_06350 PF17391 Urocanase N-terminal domain H9K44_06350 PF01175 Urocanase Rossmann-like domain H9K44_06355 PF00491 Arginase family H9K44_06360 PF01979 Amidohydrolase family H9K44_06365 PF07702 UTRA domain H9K44_06365 PF00392 Bacterial regulatory proteins, gntR family H9K44_06380 PF03129 Anticodon binding domain H9K44_06380 PF02824 TGS domain H9K44_06380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K44_06380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K44_06385 PF05198 Translation initiation factor IF-3, N-terminal domain H9K44_06385 PF00707 Translation initiation factor IF-3, C-terminal domain H9K44_06390 PF01632 Ribosomal protein L35 H9K44_06395 PF00453 Ribosomal protein L20 H9K44_06400 PF01906 Putative heavy-metal-binding H9K44_06430 PF00990 Diguanylate cyclase, GGDEF domain H9K44_06430 PF17158 Membrane-associated sensor, integral membrane domain H9K44_06435 PF01409 tRNA synthetases class II core domain (F) H9K44_06435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H9K44_06440 PF03483 B3/4 domain H9K44_06440 PF03484 tRNA synthetase B5 domain H9K44_06440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H9K44_06440 PF03147 Ferredoxin-fold anticodon binding domain H9K44_06440 PF01588 Putative tRNA binding domain H9K44_06450 PF00216 Bacterial DNA-binding protein H9K44_06460 PF05724 Thiopurine S-methyltransferase (TPMT) H9K44_06465 PF02222 ATP-grasp domain H9K44_06470 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region H9K44_06470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K44_06475 PF04172 LrgB-like family H9K44_06480 PF03788 LrgA family H9K44_06485 PF00929 Exonuclease H9K44_06485 PF08411 Exonuclease C-terminal H9K44_06490 PF00375 Sodium:dicarboxylate symporter family H9K44_06495 PF13460 NAD(P)H-binding H9K44_06500 PF02277 Phosphoribosyltransferase H9K44_06505 PF02654 Cobalamin-5-phosphate synthase H9K44_06510 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H9K44_06525 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9K44_06530 PF01032 FecCD transport family H9K44_06535 PF00005 ABC transporter H9K44_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_06555 PF03466 LysR substrate binding domain H9K44_06575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9K44_06580 PF16363 GDP-mannose 4,6 dehydratase H9K44_06585 PF04991 LicD family H9K44_06590 PF01863 Protein of unknown function DUF45 H9K44_06595 PF05971 RNA methyltransferase H9K44_06615 PF00392 Bacterial regulatory proteins, gntR family H9K44_06620 PF00171 Aldehyde dehydrogenase family H9K44_06625 PF05544 Proline racemase H9K44_06640 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9K44_06645 PF00701 Dihydrodipicolinate synthetase family H9K44_06650 PF08402 TOBE domain H9K44_06650 PF00005 ABC transporter H9K44_06655 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_06660 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_06670 PF08453 Peptidase family M9 N-terminal H9K44_06670 PF01752 Collagenase H9K44_06680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_06680 PF00005 ABC transporter H9K44_06685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_06685 PF00005 ABC transporter H9K44_06690 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_06690 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_06695 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_06700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_06705 PF07687 Peptidase dimerisation domain H9K44_06705 PF01546 Peptidase family M20/M25/M40 H9K44_06710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_06715 PF04209 homogentisate 1,2-dioxygenase H9K44_06725 PF02798 Glutathione S-transferase, N-terminal domain H9K44_06725 PF14497 Glutathione S-transferase, C-terminal domain H9K44_06760 PF01810 LysE type translocator H9K44_06785 PF03553 Na+/H+ antiporter family H9K44_06790 PF00120 Glutamine synthetase, catalytic domain H9K44_06795 PF07722 Peptidase C26 H9K44_06800 PF07883 Cupin domain H9K44_06800 PF01381 Helix-turn-helix H9K44_06805 PF00171 Aldehyde dehydrogenase family H9K44_06810 PF01266 FAD dependent oxidoreductase H9K44_06815 PF00795 Carbon-nitrogen hydrolase H9K44_06820 PF04371 Porphyromonas-type peptidyl-arginine deiminase H9K44_06825 PF00171 Aldehyde dehydrogenase family H9K44_06830 PF00202 Aminotransferase class-III H9K44_06835 PF01368 DHH family H9K44_06835 PF02833 DHHA2 domain H9K44_06840 PF00563 EAL domain H9K44_06840 PF00196 Bacterial regulatory proteins, luxR family H9K44_06850 PF02272 DHHA1 domain H9K44_06850 PF01411 tRNA synthetases class II (A) H9K44_06850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K44_06855 PF12833 Helix-turn-helix domain H9K44_06865 PF01047 MarR family H9K44_06870 PF04237 YjbR H9K44_06880 PF01928 CYTH domain H9K44_06890 PF12464 Maltose acetyltransferase H9K44_06890 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_06905 PF00672 HAMP domain H9K44_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_06905 PF00512 His Kinase A (phospho-acceptor) domain H9K44_06905 PF01627 Hpt domain H9K44_06905 PF00072 Response regulator receiver domain H9K44_06905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K44_06910 PF03707 Bacterial signalling protein N terminal repeat H9K44_06910 PF00563 EAL domain H9K44_06910 PF00990 Diguanylate cyclase, GGDEF domain H9K44_06925 PF04204 Homoserine O-succinyltransferase H9K44_06935 PF13520 Amino acid permease H9K44_06940 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K44_06950 PF13408 Recombinase zinc beta ribbon domain H9K44_06950 PF00239 Resolvase, N terminal domain H9K44_06950 PF07508 Recombinase H9K44_07015 PF07745 Glycosyl hydrolase family 53 H9K44_07020 PF00356 Bacterial regulatory proteins, lacI family H9K44_07025 PF00005 ABC transporter H9K44_07025 PF17912 MalK OB fold domain H9K44_07030 PF13416 Bacterial extracellular solute-binding protein H9K44_07035 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_07040 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_07045 PF07745 Glycosyl hydrolase family 53 H9K44_07050 PF02449 Beta-galactosidase H9K44_07050 PF08532 Beta-galactosidase trimerisation domain H9K44_07050 PF08533 Beta-galactosidase C-terminal domain H9K44_07055 PF02264 LamB porin H9K44_07060 PF00672 HAMP domain H9K44_07060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_07060 PF12729 Four helix bundle sensory module for signal transduction H9K44_07065 PF16363 GDP-mannose 4,6 dehydratase H9K44_07070 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9K44_07070 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9K44_07075 PF10509 Galactokinase galactose-binding signature H9K44_07075 PF08544 GHMP kinases C terminal H9K44_07075 PF00288 GHMP kinases N terminal domain H9K44_07115 PF02463 RecF/RecN/SMC N terminal domain H9K44_07120 PF13657 HipA N-terminal domain H9K44_07120 PF07804 HipA-like C-terminal domain H9K44_07125 PF02074 Carboxypeptidase Taq (M32) metallopeptidase H9K44_07130 PF01810 LysE type translocator H9K44_07140 PF01235 Sodium:alanine symporter family H9K44_07165 PF00884 Sulfatase H9K44_07170 PF08521 Two-component sensor kinase N-terminal H9K44_07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_07170 PF00512 His Kinase A (phospho-acceptor) domain H9K44_07175 PF00072 Response regulator receiver domain H9K44_07175 PF00486 Transcriptional regulatory protein, C terminal H9K44_07195 PF00501 AMP-binding enzyme H9K44_07205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9K44_07210 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_07215 PF00005 ABC transporter H9K44_07215 PF00571 CBS domain H9K44_07230 PF02028 BCCT, betaine/carnitine/choline family transporter H9K44_07235 PF00583 Acetyltransferase (GNAT) family H9K44_07240 PF00202 Aminotransferase class-III H9K44_07245 PF06339 Ectoine synthase H9K44_07250 PF00696 Amino acid kinase family H9K44_07250 PF13840 ACT domain H9K44_07255 PF03150 Di-haem cytochrome c peroxidase H9K44_07255 PF00034 Cytochrome c H9K44_07270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_07285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9K44_07285 PF00989 PAS fold H9K44_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_07285 PF17203 Single cache domain 3 H9K44_07290 PF12431 Transcriptional regulator H9K44_07290 PF00072 Response regulator receiver domain H9K44_07295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H9K44_07295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H9K44_07300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9K44_07305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H9K44_07305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K44_07320 PF01590 GAF domain H9K44_07320 PF02954 Bacterial regulatory protein, Fis family H9K44_07320 PF00158 Sigma-54 interaction domain H9K44_07325 PF00171 Aldehyde dehydrogenase family H9K44_07345 PF12833 Helix-turn-helix domain H9K44_07360 PF00263 Bacterial type II and III secretion system protein H9K44_07360 PF03958 Bacterial type II/III secretion system short domain H9K44_07365 PF16697 Inner membrane component of T3SS, cytoplasmic domain H9K44_07365 PF16693 Inner membrane component of T3SS, periplasmic domain H9K44_07375 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF H9K44_07380 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) H9K44_07390 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI H9K44_07395 PF01514 Secretory protein of YscJ/FliF family H9K44_07405 PF02108 Flagellar assembly protein FliH H9K44_07415 PF02661 Fic/DOC family H9K44_07445 PF12146 Serine aminopeptidase, S33 H9K44_07450 PF12146 Serine aminopeptidase, S33 H9K44_07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_07455 PF03466 LysR substrate binding domain H9K44_07460 PF01312 FlhB HrpN YscU SpaS Family H9K44_07465 PF01311 Bacterial export proteins, family 1 H9K44_07470 PF01313 Bacterial export proteins, family 3 H9K44_07475 PF00813 FliP family H9K44_07480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K44_07495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_07495 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K44_07495 PF18269 T3SS EscN ATPase C-terminal domain H9K44_07500 PF07201 HrpJ-like domain H9K44_07505 PF09059 TyeA H9K44_07525 PF00771 FHIPEP family H9K44_07530 PF09621 Type III secretion system regulator (LcrR) H9K44_07535 PF07216 LcrG protein H9K44_07540 PF04792 V antigen (LcrV) protein H9K44_07545 PF07720 Tetratricopeptide repeat H9K44_07555 PF05844 YopD protein H9K44_07565 PF01925 Sulfite exporter TauE/SafE H9K44_07570 PF01970 Tripartite tricarboxylate transporter TctA family H9K44_07600 PF00285 Citrate synthase, C-terminal domain H9K44_07605 PF00330 Aconitase family (aconitate hydratase) H9K44_07605 PF00694 Aconitase C-terminal domain H9K44_07610 PF04303 PrpF protein H9K44_07615 PF16177 Acetyl-coenzyme A synthetase N-terminus H9K44_07615 PF00501 AMP-binding enzyme H9K44_07615 PF13193 AMP-binding enzyme C-terminal domain H9K44_07620 PF00583 Acetyltransferase (GNAT) family H9K44_07625 PF00089 Trypsin H9K44_07640 PF04055 Radical SAM superfamily H9K44_07645 PF06508 Queuosine biosynthesis protein QueC H9K44_07650 PF17158 Membrane-associated sensor, integral membrane domain H9K44_07650 PF00990 Diguanylate cyclase, GGDEF domain H9K44_07660 PF00691 OmpA family H9K44_07660 PF05736 OprF membrane domain H9K44_07675 PF00691 OmpA family H9K44_07675 PF05736 OprF membrane domain H9K44_07690 PF17785 PUA-like domain H9K44_07690 PF10672 S-adenosylmethionine-dependent methyltransferase H9K44_07695 PF02743 Cache domain H9K44_07695 PF00672 HAMP domain H9K44_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_07700 PF00708 Acylphosphatase H9K44_07705 PF04358 DsrC like protein H9K44_07715 PF01027 Inhibitor of apoptosis-promoting Bax1 H9K44_07720 PF00005 ABC transporter H9K44_07725 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_07730 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_07740 PF10414 Sirohaem synthase dimerisation region H9K44_07740 PF14824 Sirohaem biosynthesis protein central H9K44_07740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K44_07745 PF04461 Protein of unknown function (DUF520) H9K44_07750 PF00793 DAHP synthetase I family H9K44_07770 PF01189 16S rRNA methyltransferase RsmB/F H9K44_07770 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H9K44_07770 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF H9K44_07775 PF02470 MlaD protein H9K44_07780 PF04403 Paraquat-inducible protein A H9K44_07785 PF00005 ABC transporter H9K44_07785 PF00664 ABC transporter transmembrane region H9K44_07790 PF13185 GAF domain H9K44_07795 PF17516 ProQ C-terminal domain H9K44_07795 PF04352 ProQ/FINO family H9K44_07800 PF11818 C-terminal domain of tail specific protease (DUF3340) H9K44_07800 PF00595 PDZ domain H9K44_07800 PF03572 Peptidase family S41 H9K44_07800 PF17804 Tail specific protease N-terminal domain H9K44_07810 PF11940 Domain of unknown function (DUF3458) Ig-like fold H9K44_07810 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H9K44_07810 PF01433 Peptidase family M1 domain H9K44_07820 PF05088 Bacterial NAD-glutamate dehydrogenase H9K44_07825 PF01180 Dihydroorotate dehydrogenase H9K44_07830 PF07126 Cell-division protein ZapC H9K44_07835 PF10672 S-adenosylmethionine-dependent methyltransferase H9K44_07835 PF02926 THUMP domain H9K44_07835 PF01170 Putative RNA methylase family UPF0020 H9K44_07845 PF16326 ABC transporter C-terminal domain H9K44_07845 PF00005 ABC transporter H9K44_07845 PF12848 ABC transporter H9K44_07855 PF04957 Ribosome modulation factor H9K44_07860 PF07977 FabA-like domain H9K44_07865 PF13654 AAA domain H9K44_07865 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K44_07870 PF06303 MatP N-terminal domain H9K44_07870 PF17414 MatP C-terminal ribbon-helix-helix domain H9K44_08050 PF00072 Response regulator receiver domain H9K44_08050 PF00512 His Kinase A (phospho-acceptor) domain H9K44_08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_08050 PF09308 LuxQ, periplasmic H9K44_08065 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K44_08080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K44_08080 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H9K44_08090 PF00403 Heavy-metal-associated domain H9K44_08105 PF13545 Crp-like helix-turn-helix domain H9K44_08105 PF00027 Cyclic nucleotide-binding domain H9K44_08110 PF00582 Universal stress protein family H9K44_08115 PF01171 PP-loop family H9K44_08135 PF00005 ABC transporter H9K44_08135 PF08402 TOBE domain H9K44_08140 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_08145 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_08150 PF13416 Bacterial extracellular solute-binding protein H9K44_08155 PF13416 Bacterial extracellular solute-binding protein H9K44_08160 PF02146 Sir2 family H9K44_08170 PF00909 Ammonium Transporter Family H9K44_08180 PF03527 RHS protein H9K44_08180 PF05593 RHS Repeat H9K44_08195 PF13247 4Fe-4S dicluster domain H9K44_08200 PF01568 Molydopterin dinucleotide binding domain H9K44_08200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_08200 PF00384 Molybdopterin oxidoreductase H9K44_08210 PF02613 Nitrate reductase delta subunit H9K44_08230 PF02634 FdhD/NarQ family H9K44_08235 PF00005 ABC transporter H9K44_08235 PF12848 ABC transporter H9K44_08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_08240 PF00512 His Kinase A (phospho-acceptor) domain H9K44_08245 PF02954 Bacterial regulatory protein, Fis family H9K44_08245 PF00158 Sigma-54 interaction domain H9K44_08245 PF00072 Response regulator receiver domain H9K44_08250 PF12849 PBP superfamily domain H9K44_08255 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_08260 PF00005 ABC transporter H9K44_08260 PF08402 TOBE domain H9K44_08265 PF12804 MobA-like NTP transferase domain H9K44_08270 PF03454 MoeA C-terminal region (domain IV) H9K44_08270 PF03453 MoeA N-terminal region (domain I and II) H9K44_08270 PF00994 Probable molybdopterin binding domain H9K44_08280 PF00480 ROK family H9K44_08285 PF03942 DTW domain H9K44_08320 PF17202 Single cache domain 3 H9K44_08320 PF00672 HAMP domain H9K44_08320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_08325 PF00877 NlpC/P60 family H9K44_08335 PF05230 MASE2 domain H9K44_08335 PF00990 Diguanylate cyclase, GGDEF domain H9K44_08340 PF01339 CheB methylesterase H9K44_08340 PF00072 Response regulator receiver domain H9K44_08345 PF03881 Fructosamine kinase H9K44_08355 PF00677 Lumazine binding domain H9K44_08360 PF01554 MatE H9K44_08370 PF01068 ATP dependent DNA ligase domain H9K44_08370 PF14743 DNA ligase OB-like domain H9K44_08375 PF01740 STAS domain H9K44_08385 PF02563 Polysaccharide biosynthesis/export protein H9K44_08385 PF10531 SLBB domain H9K44_08400 PF02954 Bacterial regulatory protein, Fis family H9K44_08400 PF00072 Response regulator receiver domain H9K44_08400 PF00158 Sigma-54 interaction domain H9K44_08405 PF00534 Glycosyl transferases group 1 H9K44_08405 PF13439 Glycosyltransferase Family 4 H9K44_08410 PF13439 Glycosyltransferase Family 4 H9K44_08410 PF00534 Glycosyl transferases group 1 H9K44_08440 PF13439 Glycosyltransferase Family 4 H9K44_08440 PF00534 Glycosyl transferases group 1 H9K44_08445 PF00535 Glycosyl transferase family 2 H9K44_08450 PF02397 Bacterial sugar transferase H9K44_08460 PF02028 BCCT, betaine/carnitine/choline family transporter H9K44_08475 PF00271 Helicase conserved C-terminal domain H9K44_08475 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9K44_08475 PF11898 Domain of unknown function (DUF3418) H9K44_08475 PF00270 DEAD/DEAH box helicase H9K44_08475 PF04408 Helicase associated domain (HA2) H9K44_08480 PF02525 Flavodoxin-like fold H9K44_08490 PF02613 Nitrate reductase delta subunit H9K44_08495 PF04976 DMSO reductase anchor subunit (DmsC) H9K44_08500 PF12800 4Fe-4S binding domain H9K44_08500 PF13247 4Fe-4S dicluster domain H9K44_08505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_08505 PF01568 Molydopterin dinucleotide binding domain H9K44_08505 PF00384 Molybdopterin oxidoreductase H9K44_08535 PF00990 Diguanylate cyclase, GGDEF domain H9K44_08535 PF17158 Membrane-associated sensor, integral membrane domain H9K44_08545 PF00012 Hsp70 protein H9K44_08550 PF00012 Hsp70 protein H9K44_08575 PF00005 ABC transporter H9K44_08575 PF00664 ABC transporter transmembrane region H9K44_08580 PF00664 ABC transporter transmembrane region H9K44_08580 PF00005 ABC transporter H9K44_08600 PF03222 Tryptophan/tyrosine permease family H9K44_08605 PF00465 Iron-containing alcohol dehydrogenase H9K44_08610 PF01966 HD domain H9K44_08620 PF03741 Integral membrane protein TerC family H9K44_08630 PF04055 Radical SAM superfamily H9K44_08635 PF11230 Protein of unknown function (DUF3029) H9K44_08640 PF01810 LysE type translocator H9K44_08645 PF11871 Domain of unknown function (DUF3391) H9K44_08645 PF01966 HD domain H9K44_08650 PF03707 Bacterial signalling protein N terminal repeat H9K44_08650 PF00990 Diguanylate cyclase, GGDEF domain H9K44_08650 PF00563 EAL domain H9K44_08655 PF02954 Bacterial regulatory protein, Fis family H9K44_08655 PF00072 Response regulator receiver domain H9K44_08655 PF00158 Sigma-54 interaction domain H9K44_08660 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_08660 PF00512 His Kinase A (phospho-acceptor) domain H9K44_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_08665 PF00939 Sodium:sulfate symporter transmembrane region H9K44_08680 PF00300 Histidine phosphatase superfamily (branch 1) H9K44_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_08700 PF03466 LysR substrate binding domain H9K44_08705 PF08543 Phosphomethylpyrimidine kinase H9K44_08720 PF13533 Biotin-lipoyl like H9K44_08775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_08995 PF13286 Phosphohydrolase-associated domain H9K44_08995 PF01966 HD domain H9K44_09025 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system H9K44_09030 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system H9K44_09040 PF11008 Protein of unknown function (DUF2846) H9K44_09045 PF00583 Acetyltransferase (GNAT) family H9K44_09075 PF00583 Acetyltransferase (GNAT) family H9K44_09165 PF01810 LysE type translocator H9K44_09205 PF00589 Phage integrase family H9K44_09205 PF13495 Phage integrase, N-terminal SAM-like domain H9K44_09220 PF13302 Acetyltransferase (GNAT) domain H9K44_09225 PF00158 Sigma-54 interaction domain H9K44_09225 PF18024 Helix-turn-helix domain H9K44_09230 PF05128 Domain of unknown function (DUF697) H9K44_09235 PF04317 YcjX-like family, DUF463 H9K44_09250 PF04715 Anthranilate synthase component I, N terminal region H9K44_09250 PF00425 chorismate binding enzyme H9K44_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_09255 PF00072 Response regulator receiver domain H9K44_09255 PF09308 LuxQ, periplasmic H9K44_09255 PF00512 His Kinase A (phospho-acceptor) domain H9K44_09265 PF00293 NUDIX domain H9K44_09270 PF03222 Tryptophan/tyrosine permease family H9K44_09275 PF03315 Serine dehydratase beta chain H9K44_09275 PF03313 Serine dehydratase alpha chain H9K44_09280 PF04940 Sensors of blue-light using FAD H9K44_09280 PF00563 EAL domain H9K44_09290 PF01242 6-pyruvoyl tetrahydropterin synthase H9K44_09295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_09295 PF00672 HAMP domain H9K44_09295 PF12729 Four helix bundle sensory module for signal transduction H9K44_09300 PF00152 tRNA synthetases class II (D, K and N) H9K44_09300 PF01336 OB-fold nucleic acid binding domain H9K44_09310 PF00155 Aminotransferase class I and II H9K44_09310 PF00392 Bacterial regulatory proteins, gntR family H9K44_09325 PF00155 Aminotransferase class I and II H9K44_09345 PF00672 HAMP domain H9K44_09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_09350 PF02028 BCCT, betaine/carnitine/choline family transporter H9K44_09355 PF01047 MarR family H9K44_09360 PF00072 Response regulator receiver domain H9K44_09360 PF00196 Bacterial regulatory proteins, luxR family H9K44_09365 PF07730 Histidine kinase H9K44_09365 PF17200 Single Cache domain 2 H9K44_09370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K44_09380 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K44_09395 PF00753 Metallo-beta-lactamase superfamily H9K44_09400 PF05951 Bacterial protein of unknown function (DUF882) H9K44_09405 PF01471 Putative peptidoglycan binding domain H9K44_09405 PF03734 L,D-transpeptidase catalytic domain H9K44_09430 PF00925 GTP cyclohydrolase II H9K44_09440 PF03918 Cytochrome C biogenesis protein H9K44_09445 PF08534 Redoxin H9K44_09450 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K44_09450 PF01578 Cytochrome C assembly protein H9K44_09455 PF03916 Polysulphide reductase, NrfD H9K44_09460 PF13247 4Fe-4S dicluster domain H9K44_09470 PF02335 Cytochrome c552 H9K44_09485 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K44_09485 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K44_09495 PF02867 Ribonucleotide reductase, barrel domain H9K44_09495 PF00317 Ribonucleotide reductase, all-alpha domain H9K44_09495 PF03477 ATP cone domain H9K44_09500 PF00268 Ribonucleotide reductase, small chain H9K44_09510 PF00994 Probable molybdopterin binding domain H9K44_09525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K44_09530 PF16653 Saccharopine dehydrogenase C-terminal domain H9K44_09530 PF03435 Saccharopine dehydrogenase NADP binding domain H9K44_09535 PF00202 Aminotransferase class-III H9K44_09560 PF01066 CDP-alcohol phosphatidyltransferase H9K44_09565 PF02151 UvrB/uvrC motif H9K44_09565 PF08459 UvrC Helix-hairpin-helix N-terminal H9K44_09565 PF01541 GIY-YIG catalytic domain H9K44_09570 PF00196 Bacterial regulatory proteins, luxR family H9K44_09570 PF00072 Response regulator receiver domain H9K44_09575 PF00136 DNA polymerase family B H9K44_09575 PF03104 DNA polymerase family B, exonuclease domain H9K44_09585 PF01132 Elongation factor P (EF-P) OB domain H9K44_09585 PF08207 Elongation factor P (EF-P) KOW-like domain H9K44_09585 PF09285 Elongation factor P, C-terminal H9K44_09590 PF04269 Protein of unknown function, DUF440 H9K44_09595 PF00849 RNA pseudouridylate synthase H9K44_09595 PF01479 S4 domain H9K44_09605 PF01300 Telomere recombination H9K44_09610 PF02811 PHP domain H9K44_09615 PF08056 Tryptophan operon leader peptide H9K44_09620 PF00425 chorismate binding enzyme H9K44_09620 PF04715 Anthranilate synthase component I, N terminal region H9K44_09625 PF00117 Glutamine amidotransferase class-I H9K44_09630 PF02885 Glycosyl transferase family, helical bundle domain H9K44_09630 PF00591 Glycosyl transferase family, a/b domain H9K44_09635 PF00218 Indole-3-glycerol phosphate synthase H9K44_09635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H9K44_09640 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_09645 PF00290 Tryptophan synthase alpha chain H9K44_09650 PF00027 Cyclic nucleotide-binding domain H9K44_09650 PF13545 Crp-like helix-turn-helix domain H9K44_09655 PF00501 AMP-binding enzyme H9K44_09655 PF13193 AMP-binding enzyme C-terminal domain H9K44_09660 PF00375 Sodium:dicarboxylate symporter family H9K44_09665 PF17327 Acyl homoserine lactone synthase H9K44_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_09670 PF00072 Response regulator receiver domain H9K44_09680 PF04279 Intracellular septation protein A H9K44_09685 PF03061 Thioesterase superfamily H9K44_09690 PF03795 YCII-related domain H9K44_09700 PF08267 Cobalamin-independent synthase, N-terminal domain H9K44_09700 PF01717 Cobalamin-independent synthase, Catalytic domain H9K44_09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_09705 PF03466 LysR substrate binding domain H9K44_09720 PF00990 Diguanylate cyclase, GGDEF domain H9K44_09720 PF00360 Phytochrome region H9K44_09720 PF00563 EAL domain H9K44_09720 PF01590 GAF domain H9K44_09725 PF11842 Domain of unknown function (DUF3362) H9K44_09725 PF04055 Radical SAM superfamily H9K44_09725 PF08497 Radical SAM N-terminal H9K44_09730 PF00672 HAMP domain H9K44_09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_09735 PF00072 Response regulator receiver domain H9K44_09735 PF00486 Transcriptional regulatory protein, C terminal H9K44_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_09740 PF00672 HAMP domain H9K44_09740 PF00512 His Kinase A (phospho-acceptor) domain H9K44_09760 PF03466 LysR substrate binding domain H9K44_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_09765 PF00529 HlyD membrane-fusion protein of T1SS H9K44_09765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_09775 PF01717 Cobalamin-independent synthase, Catalytic domain H9K44_09775 PF08267 Cobalamin-independent synthase, N-terminal domain H9K44_09785 PF12833 Helix-turn-helix domain H9K44_09785 PF02311 AraC-like ligand binding domain H9K44_09790 PF00857 Isochorismatase family H9K44_09795 PF12704 MacB-like periplasmic core domain H9K44_09795 PF02687 FtsX-like permease family H9K44_09795 PF00005 ABC transporter H9K44_09800 PF12704 MacB-like periplasmic core domain H9K44_09800 PF02687 FtsX-like permease family H9K44_09800 PF00005 ABC transporter H9K44_09805 PF02687 FtsX-like permease family H9K44_09805 PF00005 ABC transporter H9K44_09805 PF12704 MacB-like periplasmic core domain H9K44_09815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_09835 PF00085 Thioredoxin H9K44_09840 PF02683 Cytochrome C biogenesis protein transmembrane region H9K44_09840 PF11412 Disulphide bond corrector protein DsbC H9K44_09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_09850 PF03466 LysR substrate binding domain H9K44_09855 PF00196 Bacterial regulatory proteins, luxR family H9K44_09855 PF00072 Response regulator receiver domain H9K44_09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_09860 PF00512 His Kinase A (phospho-acceptor) domain H9K44_09865 PF13247 4Fe-4S dicluster domain H9K44_09870 PF03916 Polysulphide reductase, NrfD H9K44_09875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_09875 PF00384 Molybdopterin oxidoreductase H9K44_09875 PF01568 Molydopterin dinucleotide binding domain H9K44_09880 PF00034 Cytochrome c H9K44_09885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K44_09890 PF04403 Paraquat-inducible protein A H9K44_09895 PF02470 MlaD protein H9K44_09905 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H9K44_09915 PF00535 Glycosyl transferase family 2 H9K44_09920 PF01370 NAD dependent epimerase/dehydratase family H9K44_09930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_09935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H9K44_09940 PF18073 Rubredoxin metal binding domain H9K44_09945 PF06305 Lipopolysaccharide assembly protein A domain H9K44_09950 PF00216 Bacterial DNA-binding protein H9K44_09955 PF00575 S1 RNA binding domain H9K44_09960 PF02224 Cytidylate kinase H9K44_09965 PF01343 Peptidase family S49 H9K44_09965 PF08496 Peptidase family S49 N-terminal H9K44_09970 PF00106 short chain dehydrogenase H9K44_09985 PF01336 OB-fold nucleic acid binding domain H9K44_09985 PF02811 PHP domain H9K44_09985 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K44_09985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K44_09985 PF14579 Helix-hairpin-helix motif H9K44_09990 PF01584 CheW-like domain H9K44_09990 PF00072 Response regulator receiver domain H9K44_09995 PF00480 ROK family H9K44_10000 PF00224 Pyruvate kinase, barrel domain H9K44_10000 PF02887 Pyruvate kinase, alpha/beta domain H9K44_10005 PF01734 Patatin-like phospholipase H9K44_10020 PF00209 Sodium:neurotransmitter symporter family H9K44_10035 PF00367 phosphotransferase system, EIIB H9K44_10035 PF02378 Phosphotransferase system, EIIC H9K44_10040 PF01026 TatD related DNase H9K44_10045 PF09115 DNA polymerase III, delta subunit, C terminal H9K44_10050 PF02223 Thymidylate kinase H9K44_10055 PF02618 YceG-like family H9K44_10060 PF01063 Amino-transferase class IV H9K44_10065 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K44_10065 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K44_10070 PF00550 Phosphopantetheine attachment site H9K44_10080 PF00698 Acyl transferase domain H9K44_10085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K44_10085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K44_10090 PF02504 Fatty acid synthesis protein H9K44_10095 PF01783 Ribosomal L32p protein family H9K44_10100 PF02620 Large ribosomal RNA subunit accumulation protein YceD H9K44_10105 PF02545 Maf-like protein H9K44_10110 PF00849 RNA pseudouridylate synthase H9K44_10110 PF01479 S4 domain H9K44_10115 PF12111 Polyribonucleotide phosphorylase C terminal H9K44_10115 PF10150 Ribonuclease E/G family H9K44_10115 PF00575 S1 RNA binding domain H9K44_10120 PF01740 STAS domain H9K44_10120 PF00916 Sulfate permease family H9K44_10125 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K44_10130 PF12557 Cob(I)alamin adenosyltransferase N terminal H9K44_10130 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP H9K44_10140 PF00485 Phosphoribulokinase / Uridine kinase family H9K44_10145 PF10609 NUBPL iron-transfer P-loop NTPase H9K44_10150 PF09334 tRNA synthetases class I (M) H9K44_10150 PF01588 Putative tRNA binding domain H9K44_10160 PF00392 Bacterial regulatory proteins, gntR family H9K44_10160 PF07840 FadR C-terminal domain H9K44_10165 PF06450 Bacterial Na+/H+ antiporter B (NhaB) H9K44_10170 PF02600 Disulfide bond formation protein DsbB H9K44_10175 PF07517 SecA DEAD-like domain H9K44_10175 PF02810 SEC-C motif H9K44_10175 PF07516 SecA Wing and Scaffold domain H9K44_10175 PF01043 SecA preprotein cross-linking domain H9K44_10180 PF01207 Dihydrouridine synthase (Dus) H9K44_10185 PF00072 Response regulator receiver domain H9K44_10185 PF00990 Diguanylate cyclase, GGDEF domain H9K44_10190 PF00128 Alpha amylase, catalytic domain H9K44_10190 PF02903 Alpha amylase, N-terminal ig-like domain H9K44_10195 PF00005 ABC transporter H9K44_10200 PF02653 Branched-chain amino acid transport system / permease component H9K44_10210 PF04217 Protein of unknown function, DUF412 H9K44_10215 PF00871 Acetokinase family H9K44_10220 PF01515 Phosphate acetyl/butaryl transferase H9K44_10220 PF07085 DRTGG domain H9K44_10225 PF13194 Domain of unknown function (DUF4010) H9K44_10235 PF13409 Glutathione S-transferase, N-terminal domain H9K44_10240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_10240 PF00005 ABC transporter H9K44_10245 PF00005 ABC transporter H9K44_10245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_10250 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_10250 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_10255 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_10260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_10265 PF02391 MoaE protein H9K44_10270 PF02597 ThiS family H9K44_10275 PF01967 MoaC family H9K44_10280 PF00994 Probable molybdopterin binding domain H9K44_10285 PF06463 Molybdenum Cofactor Synthesis C H9K44_10285 PF04055 Radical SAM superfamily H9K44_10290 PF01933 Uncharacterised protein family UPF0052 H9K44_10295 PF01627 Hpt domain H9K44_10300 PF00158 Sigma-54 interaction domain H9K44_10300 PF00072 Response regulator receiver domain H9K44_10300 PF02954 Bacterial regulatory protein, Fis family H9K44_10305 PF02151 UvrB/uvrC motif H9K44_10305 PF00271 Helicase conserved C-terminal domain H9K44_10305 PF04851 Type III restriction enzyme, res subunit H9K44_10305 PF17757 UvrB interaction domain H9K44_10305 PF12344 Ultra-violet resistance protein B H9K44_10315 PF02508 Rnf-Nqr subunit, membrane protein H9K44_10320 PF04060 Putative Fe-S cluster H9K44_10325 PF12838 4Fe-4S dicluster domain H9K44_10325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H9K44_10325 PF10531 SLBB domain H9K44_10325 PF13375 RnfC Barrel sandwich hybrid domain H9K44_10330 PF03116 NQR2, RnfD, RnfE family H9K44_10335 PF04205 FMN-binding domain H9K44_10340 PF02508 Rnf-Nqr subunit, membrane protein H9K44_10345 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K44_10345 PF00633 Helix-hairpin-helix motif H9K44_10345 PF10576 Iron-sulfur binding domain of endonuclease III H9K44_10350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_10355 PF10952 Protein of unknown function (DUF2753) H9K44_10360 PF18393 MotY N-terminal domain H9K44_10360 PF00691 OmpA family H9K44_10365 PF00929 Exonuclease H9K44_10370 PF13726 Na+-H+ antiporter family H9K44_10370 PF03553 Na+/H+ antiporter family H9K44_10380 PF00462 Glutaredoxin H9K44_10385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K44_10385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K44_10400 PF00465 Iron-containing alcohol dehydrogenase H9K44_10400 PF00171 Aldehyde dehydrogenase family H9K44_10405 PF01914 MarC family integral membrane protein H9K44_10410 PF00520 Ion transport protein H9K44_10410 PF00027 Cyclic nucleotide-binding domain H9K44_10415 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K44_10415 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K44_10420 PF03553 Na+/H+ antiporter family H9K44_10435 PF04245 37-kD nucleoid-associated bacterial protein H9K44_10440 PF07208 Protein of unknown function (DUF1414) H9K44_10445 PF00884 Sulfatase H9K44_10445 PF11893 Domain of unknown function (DUF3413) H9K44_10455 PF00850 Histone deacetylase domain H9K44_10460 PF00106 short chain dehydrogenase H9K44_10470 PF01131 DNA topoisomerase H9K44_10470 PF01751 Toprim domain H9K44_10475 PF00881 Nitroreductase family H9K44_10480 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_10480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K44_10485 PF01343 Peptidase family S49 H9K44_10490 PF17763 Glutaminase/Asparaginase C-terminal domain H9K44_10490 PF00710 Asparaginase, N-terminal H9K44_10495 PF07023 Protein of unknown function (DUF1315) H9K44_10505 PF01641 SelR domain H9K44_10510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K44_10510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K44_10515 PF01263 Aldose 1-epimerase H9K44_10520 PF02743 Cache domain H9K44_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_10520 PF00672 HAMP domain H9K44_10525 PF13847 Methyltransferase domain H9K44_10540 PF00245 Alkaline phosphatase H9K44_10550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_10560 PF00924 Mechanosensitive ion channel H9K44_10560 PF05552 Conserved TM helix H9K44_10565 PF03692 Putative zinc- or iron-chelating domain H9K44_10570 PF04226 Transglycosylase associated protein H9K44_10575 PF03692 Putative zinc- or iron-chelating domain H9K44_10585 PF03313 Serine dehydratase alpha chain H9K44_10590 PF01042 Endoribonuclease L-PSP H9K44_10600 PF00230 Major intrinsic protein H9K44_10605 PF13662 Toprim domain H9K44_10605 PF02132 RecR protein H9K44_10610 PF02575 YbaB/EbfC DNA-binding family H9K44_10615 PF12170 DNA polymerase III tau subunit V interacting with alpha H9K44_10615 PF12169 DNA polymerase III subunits gamma and tau domain III H9K44_10615 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H9K44_10620 PF00156 Phosphoribosyl transferase domain H9K44_10625 PF04304 Protein of unknown function (DUF454) H9K44_10630 PF00072 Response regulator receiver domain H9K44_10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_10635 PF03466 LysR substrate binding domain H9K44_10640 PF00156 Phosphoribosyl transferase domain H9K44_10645 PF02674 Colicin V production protein H9K44_10650 PF05036 Sporulation related domain H9K44_10655 PF08245 Mur ligase middle domain H9K44_10655 PF02875 Mur ligase family, glutamate ligase domain H9K44_10660 PF01039 Carboxyl transferase domain H9K44_10660 PF17848 Acetyl-coA carboxylase zinc finger domain H9K44_10665 PF01416 tRNA pseudouridine synthase H9K44_10675 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K44_10675 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K44_10680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K44_10680 PF11890 Domain of unknown function (DUF3410) H9K44_10680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K44_10685 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K44_10685 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K44_10690 PF01266 FAD dependent oxidoreductase H9K44_10690 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H9K44_10700 PF08891 YfcL protein H9K44_10705 PF04315 Elongation factor P hydroxylase H9K44_10710 PF03458 UPF0126 domain H9K44_10715 PF01264 Chorismate synthase H9K44_10720 PF05175 Methyltransferase small domain H9K44_10725 PF01713 Smr domain H9K44_10730 PF00300 Histidine phosphatase superfamily (branch 1) H9K44_10735 PF00675 Insulinase (Peptidase family M16) H9K44_10735 PF16187 Middle or third domain of peptidase_M16 H9K44_10735 PF05193 Peptidase M16 inactive domain H9K44_10745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K44_10745 PF00378 Enoyl-CoA hydratase/isomerase H9K44_10745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K44_10750 PF00108 Thiolase, N-terminal domain H9K44_10750 PF02803 Thiolase, C-terminal domain H9K44_10755 PF04542 Sigma-70 region 2 H9K44_10755 PF08281 Sigma-70, region 4 H9K44_10765 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K44_10770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K44_10775 PF04333 MlaA lipoprotein H9K44_10785 PF03918 Cytochrome C biogenesis protein H9K44_10790 PF08534 Redoxin H9K44_10795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K44_10795 PF01578 Cytochrome C assembly protein H9K44_10800 PF03100 CcmE H9K44_10805 PF04995 Heme exporter protein D (CcmD) H9K44_10810 PF01578 Cytochrome C assembly protein H9K44_10815 PF03379 CcmB protein H9K44_10820 PF00005 ABC transporter H9K44_10830 PF01584 CheW-like domain H9K44_10840 PF13614 AAA domain H9K44_10845 PF01339 CheB methylesterase H9K44_10845 PF00072 Response regulator receiver domain H9K44_10850 PF00072 Response regulator receiver domain H9K44_10850 PF01584 CheW-like domain H9K44_10850 PF02895 Signal transducing histidine kinase, homodimeric domain H9K44_10850 PF01627 Hpt domain H9K44_10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_10855 PF04344 Chemotaxis phosphatase, CheZ H9K44_10860 PF00072 Response regulator receiver domain H9K44_10865 PF04542 Sigma-70 region 2 H9K44_10865 PF04545 Sigma-70, region 4 H9K44_10865 PF04539 Sigma-70 region 3 H9K44_10870 PF10609 NUBPL iron-transfer P-loop NTPase H9K44_10875 PF00448 SRP54-type protein, GTPase domain H9K44_10880 PF00771 FHIPEP family H9K44_10885 PF01312 FlhB HrpN YscU SpaS Family H9K44_10890 PF01311 Bacterial export proteins, family 1 H9K44_10895 PF01313 Bacterial export proteins, family 3 H9K44_10900 PF00813 FliP family H9K44_10905 PF04347 Flagellar biosynthesis protein, FliO H9K44_10910 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K44_10915 PF02154 Flagellar motor switch protein FliM H9K44_10915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K44_10935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_10935 PF18269 T3SS EscN ATPase C-terminal domain H9K44_10945 PF14841 FliG middle domain H9K44_10945 PF14842 FliG N-terminal domain H9K44_10945 PF01706 FliG C-terminal domain H9K44_10950 PF01514 Secretory protein of YscJ/FliF family H9K44_10950 PF08345 Flagellar M-ring protein C-terminal H9K44_10955 PF02049 Flagellar hook-basal body complex protein FliE H9K44_10960 PF02954 Bacterial regulatory protein, Fis family H9K44_10960 PF00072 Response regulator receiver domain H9K44_10960 PF00158 Sigma-54 interaction domain H9K44_10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_10965 PF00512 His Kinase A (phospho-acceptor) domain H9K44_10965 PF13188 PAS domain H9K44_10970 PF00158 Sigma-54 interaction domain H9K44_10970 PF02954 Bacterial regulatory protein, Fis family H9K44_10970 PF06490 Flagellar regulatory protein FleQ H9K44_10975 PF02561 Flagellar protein FliS H9K44_10985 PF07196 Flagellin hook IN motif H9K44_10985 PF07195 Flagellar hook-associated protein 2 C-terminus H9K44_10985 PF02465 Flagellar hook-associated protein 2 N-terminus H9K44_10990 PF03646 FlaG protein H9K44_10995 PF00700 Bacterial flagellin C-terminal helical region H9K44_10995 PF07196 Flagellin hook IN motif H9K44_10995 PF00669 Bacterial flagellin N-terminal helical region H9K44_11000 PF07196 Flagellin hook IN motif H9K44_11000 PF00700 Bacterial flagellin C-terminal helical region H9K44_11000 PF00669 Bacterial flagellin N-terminal helical region H9K44_11005 PF00669 Bacterial flagellin N-terminal helical region H9K44_11005 PF07196 Flagellin hook IN motif H9K44_11005 PF00700 Bacterial flagellin C-terminal helical region H9K44_11010 PF04261 Dyp-type peroxidase family H9K44_11015 PF11143 Protein of unknown function (DUF2919) H9K44_11035 PF03960 ArsC family H9K44_11040 PF01546 Peptidase family M20/M25/M40 H9K44_11040 PF07687 Peptidase dimerisation domain H9K44_11055 PF06804 NlpB/DapX lipoprotein H9K44_11060 PF00701 Dihydrodipicolinate synthetase family H9K44_11065 PF01842 ACT domain H9K44_11070 PF00578 AhpC/TSA family H9K44_11075 PF01594 AI-2E family transporter H9K44_11085 PF13181 Tetratricopeptide repeat H9K44_11085 PF01435 Peptidase family M48 H9K44_11090 PF03960 ArsC family H9K44_11095 PF03358 NADPH-dependent FMN reductase H9K44_11110 PF00860 Permease family H9K44_11120 PF00586 AIR synthase related protein, N-terminal domain H9K44_11120 PF02769 AIR synthase related protein, C-terminal domain H9K44_11125 PF00551 Formyl transferase H9K44_11130 PF02629 CoA binding domain H9K44_11130 PF00549 CoA-ligase H9K44_11135 PF08442 ATP-grasp domain H9K44_11135 PF00549 CoA-ligase H9K44_11140 PF02817 e3 binding domain H9K44_11140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K44_11140 PF00364 Biotin-requiring enzyme H9K44_11145 PF00676 Dehydrogenase E1 component H9K44_11145 PF16870 2-oxoglutarate dehydrogenase C-terminal H9K44_11145 PF02779 Transketolase, pyrimidine binding domain H9K44_11145 PF16078 2-oxoglutarate dehydrogenase N-terminus H9K44_11150 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K44_11155 PF00890 FAD binding domain H9K44_11155 PF02910 Fumarate reductase flavoprotein C-term H9K44_11160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K44_11165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K44_11170 PF00285 Citrate synthase, C-terminal domain H9K44_11175 PF01784 NIF3 (NGG1p interacting factor 3) H9K44_11185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K44_11185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K44_11185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K44_11185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K44_11190 PF03925 SeqA protein C-terminal domain H9K44_11190 PF17206 SeqA protein N-terminal domain H9K44_11195 PF12697 Alpha/beta hydrolase family H9K44_11205 PF00258 Flavodoxin H9K44_11210 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K44_11210 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K44_11215 PF01475 Ferric uptake regulator family H9K44_11220 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K44_11220 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H9K44_11225 PF00367 phosphotransferase system, EIIB H9K44_11225 PF02378 Phosphotransferase system, EIIC H9K44_11230 PF01979 Amidohydrolase family H9K44_11235 PF01047 MarR family H9K44_11235 PF00480 ROK family H9K44_11240 PF00999 Sodium/hydrogen exchanger family H9K44_11240 PF02254 TrkA-N domain H9K44_11245 PF00733 Asparagine synthase H9K44_11245 PF13537 Glutamine amidotransferase domain H9K44_11250 PF02357 Transcription termination factor nusG H9K44_11255 PF00854 POT family H9K44_11260 PF00762 Ferrochelatase H9K44_11265 PF05191 Adenylate kinase, active site lid H9K44_11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_11270 PF00183 Hsp90 protein H9K44_11275 PF00486 Transcriptional regulatory protein, C terminal H9K44_11280 PF17323 Trans-membrane regulatory protein ToxS H9K44_11295 PF12850 Calcineurin-like phosphoesterase superfamily domain H9K44_11310 PF07556 Protein of unknown function (DUF1538) H9K44_11315 PF07556 Protein of unknown function (DUF1538) H9K44_11320 PF08338 Domain of unknown function (DUF1731) H9K44_11320 PF01370 NAD dependent epimerase/dehydratase family H9K44_11325 PF00106 short chain dehydrogenase H9K44_11330 PF00085 Thioredoxin H9K44_11335 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) H9K44_11340 PF01270 Glycosyl hydrolases family 8 H9K44_11345 PF03170 Bacterial cellulose synthase subunit H9K44_11350 PF07238 PilZ domain H9K44_11350 PF03552 Cellulose synthase H9K44_11350 PF00535 Glycosyl transferase family 2 H9K44_11355 PF06564 Cellulose biosynthesis protein BcsQ H9K44_11370 PF10995 Cellulose biosynthesis GIL H9K44_11380 PF11658 Cellulose biosynthesis protein BcsG H9K44_11385 PF01145 SPFH domain / Band 7 family H9K44_11385 PF16200 C-terminal region of band_7 H9K44_11400 PF03573 outer membrane porin, OprD family H9K44_11405 PF00533 BRCA1 C Terminus (BRCT) domain H9K44_11405 PF01653 NAD-dependent DNA ligase adenylation domain H9K44_11405 PF03120 NAD-dependent DNA ligase OB-fold domain H9K44_11405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H9K44_11405 PF12826 Helix-hairpin-helix motif H9K44_11410 PF04354 ZipA, C-terminal FtsZ-binding domain H9K44_11420 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_11425 PF00381 PTS HPr component phosphorylation site H9K44_11430 PF05524 PEP-utilising enzyme, N-terminal H9K44_11430 PF00391 PEP-utilising enzyme, mobile domain H9K44_11430 PF02896 PEP-utilising enzyme, TIM barrel domain H9K44_11435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9K44_11440 PF00700 Bacterial flagellin C-terminal helical region H9K44_11440 PF07196 Flagellin hook IN motif H9K44_11440 PF00669 Bacterial flagellin N-terminal helical region H9K44_11445 PF07196 Flagellin hook IN motif H9K44_11445 PF00669 Bacterial flagellin N-terminal helical region H9K44_11445 PF00700 Bacterial flagellin C-terminal helical region H9K44_11450 PF00669 Bacterial flagellin N-terminal helical region H9K44_11450 PF07196 Flagellin hook IN motif H9K44_11450 PF00700 Bacterial flagellin C-terminal helical region H9K44_11455 PF00669 Bacterial flagellin N-terminal helical region H9K44_11460 PF07196 Flagellin hook IN motif H9K44_11460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_11465 PF10135 Rod binding protein H9K44_11465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K44_11470 PF02119 Flagellar P-ring protein H9K44_11475 PF02107 Flagellar L-ring protein H9K44_11480 PF00460 Flagella basal body rod protein H9K44_11480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_11485 PF00460 Flagella basal body rod protein H9K44_11485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_11490 PF07559 Flagellar basal body protein FlaE H9K44_11490 PF00460 Flagella basal body rod protein H9K44_11490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_11495 PF13860 FlgD Ig-like domain H9K44_11495 PF03963 Flagellar hook capping protein - N-terminal region H9K44_11495 PF13861 FlgD Tudor-like domain H9K44_11500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_11500 PF00460 Flagella basal body rod protein H9K44_11505 PF00460 Flagella basal body rod protein H9K44_11510 PF01739 CheR methyltransferase, SAM binding domain H9K44_11510 PF03705 CheR methyltransferase, all-alpha domain H9K44_11515 PF01584 CheW-like domain H9K44_11515 PF00072 Response regulator receiver domain H9K44_11560 PF01389 OmpA-like transmembrane domain H9K44_11560 PF00691 OmpA family H9K44_11565 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K44_11570 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K44_11575 PF13609 Gram-negative porin H9K44_11580 PF00403 Heavy-metal-associated domain H9K44_11595 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K44_11595 PF02838 Glycosyl hydrolase family 20, domain 2 H9K44_11595 PF03173 Putative carbohydrate binding domain H9K44_11595 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain H9K44_11615 PF01713 Smr domain H9K44_11620 PF00849 RNA pseudouridylate synthase H9K44_11620 PF01479 S4 domain H9K44_11625 PF04073 Aminoacyl-tRNA editing domain H9K44_11630 PF02872 5'-nucleotidase, C-terminal domain H9K44_11630 PF00149 Calcineurin-like phosphoesterase H9K44_11635 PF00793 DAHP synthetase I family H9K44_11640 PF13369 Transglutaminase-like superfamily H9K44_11645 PF04247 Invasion gene expression up-regulator, SirB H9K44_11650 PF13847 Methyltransferase domain H9K44_11650 PF17827 PrmC N-terminal domain H9K44_11655 PF03462 PCRF domain H9K44_11655 PF00472 RF-1 domain H9K44_11660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H9K44_11660 PF01488 Shikimate / quinate 5-dehydrogenase H9K44_11660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H9K44_11665 PF03550 Outer membrane lipoprotein LolB H9K44_11670 PF08544 GHMP kinases C terminal H9K44_11670 PF00288 GHMP kinases N terminal domain H9K44_11675 PF14572 Phosphoribosyl synthetase-associated domain H9K44_11675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H9K44_11680 PF01195 Peptidyl-tRNA hydrolase H9K44_11685 PF01926 50S ribosome-binding GTPase H9K44_11685 PF06071 Protein of unknown function (DUF933) H9K44_11800 PF01494 FAD binding domain H9K44_11805 PF04055 Radical SAM superfamily H9K44_11805 PF00919 Uncharacterized protein family UPF0004 H9K44_11805 PF01938 TRAM domain H9K44_11810 PF02562 PhoH-like protein H9K44_11815 PF02130 Uncharacterized protein family UPF0054 H9K44_11820 PF03471 Transporter associated domain H9K44_11820 PF00571 CBS domain H9K44_11825 PF00795 Carbon-nitrogen hydrolase H9K44_11830 PF07295 Zinc-ribbon containing domain H9K44_11835 PF08264 Anticodon-binding domain of tRNA H9K44_11835 PF00133 tRNA synthetases class I (I, L, M and V) H9K44_11835 PF13603 Leucyl-tRNA synthetase, Domain 2 H9K44_11840 PF04390 Lipopolysaccharide-assembly H9K44_11845 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H9K44_11845 PF06144 DNA polymerase III, delta subunit H9K44_11855 PF02590 Predicted SPOUT methyltransferase H9K44_11860 PF03717 Penicillin-binding Protein dimerisation domain H9K44_11860 PF00905 Penicillin binding protein transpeptidase domain H9K44_11865 PF01098 Cell cycle protein H9K44_11870 PF03330 Lytic transglycolase H9K44_11870 PF05036 Sporulation related domain H9K44_11875 PF07943 Penicillin-binding protein 5, C-terminal domain H9K44_11875 PF00768 D-alanyl-D-alanine carboxypeptidase H9K44_11880 PF04359 Protein of unknown function (DUF493) H9K44_11885 PF03099 Biotin/lipoate A/B protein ligase family H9K44_11890 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H9K44_11890 PF04055 Radical SAM superfamily H9K44_11895 PF00464 Serine hydroxymethyltransferase H9K44_11900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K44_11900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H9K44_11915 PF16657 Maltogenic Amylase, C-terminal domain H9K44_11915 PF00128 Alpha amylase, catalytic domain H9K44_11920 PF00367 phosphotransferase system, EIIB H9K44_11920 PF02378 Phosphotransferase system, EIIC H9K44_11925 PF00356 Bacterial regulatory proteins, lacI family H9K44_11935 PF00005 ABC transporter H9K44_11935 PF09383 NIL domain H9K44_11940 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_11945 PF03180 NLPA lipoprotein H9K44_11950 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) H9K44_11955 PF07348 Syd protein (SUKH-2) H9K44_11960 PF14489 QueF-like protein H9K44_11960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H9K44_11970 PF00990 Diguanylate cyclase, GGDEF domain H9K44_11975 PF11892 Domain of unknown function (DUF3412) H9K44_11975 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H9K44_11975 PF03641 Possible lysine decarboxylase H9K44_11980 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K44_11980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K44_11985 PF01223 DNA/RNA non-specific endonuclease H9K44_11990 PF01728 FtsJ-like methyltransferase H9K44_11990 PF18125 RlmM ferredoxin-like domain H9K44_11995 PF04241 Protein of unknown function (DUF423) H9K44_12005 PF03466 LysR substrate binding domain H9K44_12005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_12010 PF02926 THUMP domain H9K44_12010 PF02568 Thiamine biosynthesis protein (ThiI) H9K44_12015 PF00691 OmpA family H9K44_12020 PF01618 MotA/TolQ/ExbB proton channel family H9K44_12025 PF02609 Exonuclease VII small subunit H9K44_12030 PF00348 Polyprenyl synthetase H9K44_12035 PF02779 Transketolase, pyrimidine binding domain H9K44_12035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H9K44_12035 PF02780 Transketolase, C-terminal domain H9K44_12040 PF04608 Phosphatidylglycerophosphatase A H9K44_12045 PF00586 AIR synthase related protein, N-terminal domain H9K44_12045 PF02769 AIR synthase related protein, C-terminal domain H9K44_12050 PF01029 NusB family H9K44_12055 PF00885 6,7-dimethyl-8-ribityllumazine synthase H9K44_12060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K44_12060 PF00925 GTP cyclohydrolase II H9K44_12065 PF00677 Lumazine binding domain H9K44_12070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K44_12070 PF01872 RibD C-terminal domain H9K44_12075 PF03477 ATP cone domain H9K44_12080 PF00171 Aldehyde dehydrogenase family H9K44_12085 PF01472 PUA domain H9K44_12085 PF00696 Amino acid kinase family H9K44_12090 PF07417 Sigma factor-binding transcriptional regulator Crl H9K44_12095 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) H9K44_12100 PF00156 Phosphoribosyl transferase domain H9K44_12105 PF00860 Permease family H9K44_12110 PF07687 Peptidase dimerisation domain H9K44_12110 PF01546 Peptidase family M20/M25/M40 H9K44_12135 PF02769 AIR synthase related protein, C-terminal domain H9K44_12135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H9K44_12135 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H9K44_12140 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_12140 PF01464 Transglycosylase SLT domain H9K44_12145 PF14437 MafB19-like deaminase H9K44_12150 PF03806 AbgT putative transporter family H9K44_12170 PF07963 Prokaryotic N-terminal methylation motif H9K44_12170 PF00114 Pilin (bacterial filament) H9K44_12175 PF07963 Prokaryotic N-terminal methylation motif H9K44_12175 PF00114 Pilin (bacterial filament) H9K44_12180 PF00684 DnaJ central domain H9K44_12180 PF00226 DnaJ domain H9K44_12180 PF01556 DnaJ C terminal domain H9K44_12185 PF00012 Hsp70 protein H9K44_12190 PF00375 Sodium:dicarboxylate symporter family H9K44_12195 PF01025 GrpE H9K44_12200 PF01513 ATP-NAD kinase H9K44_12210 PF02463 RecF/RecN/SMC N terminal domain H9K44_12215 PF04355 SmpA / OmlA family H9K44_12220 PF03658 RnfH family Ubiquitin H9K44_12225 PF03364 Polyketide cyclase / dehydrase and lipid transport H9K44_12230 PF01668 SmpB protein H9K44_12250 PF03466 LysR substrate binding domain H9K44_12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_12255 PF00583 Acetyltransferase (GNAT) family H9K44_12255 PF00795 Carbon-nitrogen hydrolase H9K44_12275 PF00202 Aminotransferase class-III H9K44_12280 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K44_12285 PF07969 Amidohydrolase family H9K44_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_12300 PF03466 LysR substrate binding domain H9K44_12305 PF01266 FAD dependent oxidoreductase H9K44_12310 PF01235 Sodium:alanine symporter family H9K44_12320 PF01184 GPR1/FUN34/yaaH family H9K44_12325 PF06483 Chitinase C H9K44_12325 PF00704 Glycosyl hydrolases family 18 H9K44_12330 PF03553 Na+/H+ antiporter family H9K44_12335 PF02540 NAD synthase H9K44_12335 PF00117 Glutamine amidotransferase class-I H9K44_12335 PF00958 GMP synthase C terminal domain H9K44_12340 PF00571 CBS domain H9K44_12340 PF00478 IMP dehydrogenase / GMP reductase domain H9K44_12345 PF02601 Exonuclease VII, large subunit H9K44_12345 PF13742 OB-fold nucleic acid binding domain H9K44_12360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H9K44_12360 PF01926 50S ribosome-binding GTPase H9K44_12365 PF13360 PQQ-like domain H9K44_12370 PF09976 Tetratricopeptide repeat-like domain H9K44_12375 PF03129 Anticodon binding domain H9K44_12375 PF13393 Histidyl-tRNA synthetase H9K44_12380 PF04551 GcpE protein H9K44_12385 PF13464 Domain of unknown function (DUF4115) H9K44_12390 PF04055 Radical SAM superfamily H9K44_12395 PF00334 Nucleoside diphosphate kinase H9K44_12400 PF12404 Peptidase H9K44_12400 PF00883 Cytosol aminopeptidase family, catalytic domain H9K44_12405 PF04384 Iron-sulphur cluster assembly H9K44_12410 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_12415 PF00012 Hsp70 protein H9K44_12420 PF00226 DnaJ domain H9K44_12420 PF07743 HSCB C-terminal oligomerisation domain H9K44_12425 PF01521 Iron-sulphur cluster biosynthesis H9K44_12430 PF01592 NifU-like N terminal domain H9K44_12435 PF00266 Aminotransferase class-V H9K44_12440 PF02082 Transcriptional regulator H9K44_12445 PF00588 SpoU rRNA Methylase family H9K44_12450 PF00459 Inositol monophosphatase family H9K44_12455 PF07549 SecD/SecF GG Motif H9K44_12455 PF02355 Protein export membrane protein H9K44_12460 PF07549 SecD/SecF GG Motif H9K44_12460 PF13721 SecD export protein N-terminal TM region H9K44_12460 PF02355 Protein export membrane protein H9K44_12465 PF02699 Preprotein translocase subunit H9K44_12470 PF01702 Queuine tRNA-ribosyltransferase H9K44_12475 PF02547 Queuosine biosynthesis protein H9K44_12485 PF00571 CBS domain H9K44_12490 PF00463 Isocitrate lyase family H9K44_12495 PF01274 Malate synthase H9K44_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_12500 PF03466 LysR substrate binding domain H9K44_12505 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K44_12505 PF00578 AhpC/TSA family H9K44_12510 PF03932 CutC family H9K44_12515 PF03976 Polyphosphate kinase 2 (PPK2) H9K44_12520 PF01895 PhoU domain H9K44_12525 PF00005 ABC transporter H9K44_12530 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_12535 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_12540 PF13089 Polyphosphate kinase N-terminal domain H9K44_12540 PF17941 Polyphosphate kinase C-terminal domain 1 H9K44_12540 PF13090 Polyphosphate kinase C-terminal domain 2 H9K44_12540 PF02503 Polyphosphate kinase middle domain H9K44_12545 PF02541 Ppx/GppA phosphatase family H9K44_12550 PF12849 PBP superfamily domain H9K44_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_12555 PF00512 His Kinase A (phospho-acceptor) domain H9K44_12555 PF11808 Phosphate regulon sensor protein PhoR H9K44_12555 PF00989 PAS fold H9K44_12560 PF00072 Response regulator receiver domain H9K44_12560 PF00486 Transcriptional regulatory protein, C terminal H9K44_12565 PF04381 Putative exonuclease, RdgC H9K44_12570 PF01136 Peptidase family U32 H9K44_12570 PF16325 Peptidase family U32 C-terminal domain H9K44_12575 PF00037 4Fe-4S binding domain H9K44_12585 PF03411 Penicillin-insensitive murein endopeptidase H9K44_12630 PF17871 AAA lid domain H9K44_12630 PF10431 C-terminal, D2-small domain, of ClpB protein H9K44_12630 PF02861 Clp amino terminal domain, pathogenicity island component H9K44_12630 PF07724 AAA domain (Cdc48 subfamily) H9K44_12630 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_12635 PF02578 Multi-copper polyphenol oxidoreductase laccase H9K44_12640 PF00849 RNA pseudouridylate synthase H9K44_12640 PF01479 S4 domain H9K44_12645 PF13525 Outer membrane lipoprotein H9K44_12650 PF01464 Transglycosylase SLT domain H9K44_12655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K44_12660 PF01817 Chorismate mutase type II H9K44_12660 PF00800 Prephenate dehydratase H9K44_12665 PF01931 Protein of unknown function DUF84 H9K44_12670 PF01371 Trp repressor protein H9K44_12675 PF01464 Transglycosylase SLT domain H9K44_12675 PF14718 Soluble lytic murein transglycosylase L domain H9K44_12680 PF12848 ABC transporter H9K44_12680 PF00005 ABC transporter H9K44_12685 PF07238 PilZ domain H9K44_12690 PF04225 Opacity-associated protein A LysM-like domain H9K44_12690 PF01551 Peptidase family M23 H9K44_12695 PF01817 Chorismate mutase type II H9K44_12695 PF02153 Prephenate dehydrogenase H9K44_12700 PF00793 DAHP synthetase I family H9K44_12705 PF00933 Glycosyl hydrolase family 3 N terminal domain H9K44_12710 PF03702 Anhydro-N-acetylmuramic acid kinase H9K44_12715 PF13580 SIS domain H9K44_12730 PF02554 Carbon starvation protein CstA H9K44_12735 PF07694 5TMR of 5TMR-LYT H9K44_12735 PF06580 Histidine kinase H9K44_12740 PF04397 LytTr DNA-binding domain H9K44_12740 PF00072 Response regulator receiver domain H9K44_12745 PF02401 LytB protein H9K44_12750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_12755 PF01252 Signal peptidase (SPase) II H9K44_12760 PF08264 Anticodon-binding domain of tRNA H9K44_12760 PF00133 tRNA synthetases class I (I, L, M and V) H9K44_12760 PF06827 Zinc finger found in FPG and IleRS H9K44_12765 PF01687 Riboflavin kinase H9K44_12765 PF06574 FAD synthetase H9K44_12770 PF03023 Lipid II flippase MurJ H9K44_12775 PF01649 Ribosomal protein S20 H9K44_12780 PF01022 Bacterial regulatory protein, arsR family H9K44_12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_12785 PF03466 LysR substrate binding domain H9K44_12790 PF02690 Na+/Pi-cotransporter H9K44_12800 PF00303 Thymidylate synthase H9K44_12805 PF01790 Prolipoprotein diacylglyceryl transferase H9K44_12810 PF01925 Sulfite exporter TauE/SafE H9K44_12815 PF00391 PEP-utilising enzyme, mobile domain H9K44_12815 PF02896 PEP-utilising enzyme, TIM barrel domain H9K44_12815 PF05524 PEP-utilising enzyme, N-terminal H9K44_12815 PF01590 GAF domain H9K44_12820 PF00293 NUDIX domain H9K44_12825 PF02976 DNA mismatch repair enzyme MutH H9K44_12835 PF00248 Aldo/keto reductase family H9K44_12845 PF00158 Sigma-54 interaction domain H9K44_12845 PF02954 Bacterial regulatory protein, Fis family H9K44_12845 PF00072 Response regulator receiver domain H9K44_12850 PF00152 tRNA synthetases class II (D, K and N) H9K44_12850 PF01336 OB-fold nucleic acid binding domain H9K44_12860 PF01368 DHH family H9K44_12860 PF02272 DHHA1 domain H9K44_12860 PF17768 RecJ OB domain H9K44_12865 PF10411 Disulfide bond isomerase protein N-terminus H9K44_12865 PF13098 Thioredoxin-like domain H9K44_12870 PF02899 Phage integrase, N-terminal SAM-like domain H9K44_12870 PF00589 Phage integrase family H9K44_12875 PF00258 Flavodoxin H9K44_12880 PF05525 Branched-chain amino acid transport protein H9K44_12885 PF05175 Methyltransferase small domain H9K44_12890 PF00271 Helicase conserved C-terminal domain H9K44_12890 PF00270 DEAD/DEAH box helicase H9K44_12895 PF03883 Peroxide stress protein YaaA H9K44_12900 PF01235 Sodium:alanine symporter family H9K44_12915 PF03167 Uracil DNA glycosylase superfamily H9K44_12920 PF01261 Xylose isomerase-like TIM barrel H9K44_12925 PF01228 Glycine radical H9K44_12930 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_12930 PF14821 Threonine synthase N terminus H9K44_12935 PF00288 GHMP kinases N terminal domain H9K44_12935 PF08544 GHMP kinases C terminal H9K44_12940 PF03447 Homoserine dehydrogenase, NAD binding domain H9K44_12940 PF00742 Homoserine dehydrogenase H9K44_12940 PF13840 ACT domain H9K44_12940 PF00696 Amino acid kinase family H9K44_12940 PF01842 ACT domain H9K44_12950 PF03737 Aldolase/RraA H9K44_12960 PF00072 Response regulator receiver domain H9K44_12960 PF00486 Transcriptional regulatory protein, C terminal H9K44_12970 PF01627 Hpt domain H9K44_12970 PF18415 Histidine kinase receptor ArcB trans-membrane domain H9K44_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_12970 PF00512 His Kinase A (phospho-acceptor) domain H9K44_12970 PF00989 PAS fold H9K44_12970 PF00072 Response regulator receiver domain H9K44_12975 PF00990 Diguanylate cyclase, GGDEF domain H9K44_12975 PF01590 GAF domain H9K44_12975 PF00563 EAL domain H9K44_12975 PF00360 Phytochrome region H9K44_12980 PF04055 Radical SAM superfamily H9K44_12980 PF16199 Radical_SAM C-terminal domain H9K44_12985 PF00310 Glutamine amidotransferases class-II H9K44_12985 PF01493 GXGXG motif H9K44_12985 PF01645 Conserved region in glutamate synthase H9K44_12985 PF04898 Glutamate synthase central domain H9K44_12990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K44_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_12995 PF00310 Glutamine amidotransferases class-II H9K44_12995 PF04898 Glutamate synthase central domain H9K44_12995 PF01645 Conserved region in glutamate synthase H9K44_12995 PF01493 GXGXG motif H9K44_13000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K44_13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_13010 PF01048 Phosphorylase superfamily H9K44_13015 PF03186 CobD/Cbib protein H9K44_13015 PF17113 Regulatory signalling modulator protein AmpE H9K44_13020 PF01497 Periplasmic binding protein H9K44_13025 PF03458 UPF0126 domain H9K44_13030 PF03466 LysR substrate binding domain H9K44_13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_13035 PF01925 Sulfite exporter TauE/SafE H9K44_13050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K44_13050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H9K44_13050 PF02142 MGS-like domain H9K44_13055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H9K44_13055 PF00117 Glutamine amidotransferase class-I H9K44_13060 PF01113 Dihydrodipicolinate reductase, N-terminus H9K44_13060 PF05173 Dihydrodipicolinate reductase, C-terminus H9K44_13065 PF00293 NUDIX domain H9K44_13070 PF01043 SecA preprotein cross-linking domain H9K44_13070 PF07516 SecA Wing and Scaffold domain H9K44_13070 PF07517 SecA DEAD-like domain H9K44_13070 PF02810 SEC-C motif H9K44_13080 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H9K44_13085 PF00091 Tubulin/FtsZ family, GTPase domain H9K44_13085 PF12327 FtsZ family, C-terminal domain H9K44_13090 PF02491 SHS2 domain inserted in FTSA H9K44_13095 PF08478 POTRA domain, FtsQ-type H9K44_13095 PF03799 Cell division protein FtsQ H9K44_13100 PF01225 Mur ligase family, catalytic domain H9K44_13100 PF08245 Mur ligase middle domain H9K44_13100 PF02875 Mur ligase family, glutamate ligase domain H9K44_13105 PF04101 Glycosyltransferase family 28 C-terminal domain H9K44_13105 PF03033 Glycosyltransferase family 28 N-terminal domain H9K44_13110 PF01098 Cell cycle protein H9K44_13115 PF08245 Mur ligase middle domain H9K44_13115 PF02875 Mur ligase family, glutamate ligase domain H9K44_13120 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H9K44_13120 PF00953 Glycosyl transferase family 4 H9K44_13125 PF08245 Mur ligase middle domain H9K44_13125 PF01225 Mur ligase family, catalytic domain H9K44_13125 PF02875 Mur ligase family, glutamate ligase domain H9K44_13130 PF01225 Mur ligase family, catalytic domain H9K44_13130 PF02875 Mur ligase family, glutamate ligase domain H9K44_13130 PF08245 Mur ligase middle domain H9K44_13135 PF00905 Penicillin binding protein transpeptidase domain H9K44_13135 PF03717 Penicillin-binding Protein dimerisation domain H9K44_13140 PF04999 Cell division protein FtsL H9K44_13145 PF01795 MraW methylase family H9K44_13155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K44_13160 PF04348 LppC putative lipoprotein H9K44_13165 PF02021 Uncharacterised protein family UPF0102 H9K44_13170 PF13580 SIS domain H9K44_13175 PF04972 BON domain H9K44_13180 PF04386 Stringent starvation protein B H9K44_13185 PF00043 Glutathione S-transferase, C-terminal domain H9K44_13185 PF02798 Glutathione S-transferase, N-terminal domain H9K44_13190 PF02167 Cytochrome C1 family H9K44_13195 PF00033 Cytochrome b/b6/petB H9K44_13195 PF00032 Cytochrome b(C-terminal)/b6/petD H9K44_13200 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H9K44_13200 PF00355 Rieske [2Fe-2S] domain H9K44_13205 PF00380 Ribosomal protein S9/S16 H9K44_13210 PF00572 Ribosomal protein L13 H9K44_13215 PF03969 AFG1-like ATPase H9K44_13220 PF06295 Protein of unknown function (DUF1043) H9K44_13225 PF00595 PDZ domain H9K44_13230 PF13180 PDZ domain H9K44_13235 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K44_13235 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K44_13240 PF00204 DNA gyrase B H9K44_13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_13240 PF01751 Toprim domain H9K44_13240 PF00986 DNA gyrase B subunit, carboxyl terminus H9K44_13245 PF05728 Uncharacterised protein family (UPF0227) H9K44_13250 PF00149 Calcineurin-like phosphoesterase H9K44_13255 PF06853 Protein of unknown function (DUF1249) H9K44_13260 PF00293 NUDIX domain H9K44_13265 PF02321 Outer membrane efflux protein H9K44_13270 PF01467 Cytidylyltransferase-like H9K44_13270 PF00294 pfkB family carbohydrate kinase H9K44_13275 PF03710 Glutamate-ammonia ligase adenylyltransferase H9K44_13275 PF08335 GlnD PII-uridylyltransferase H9K44_13280 PF00672 HAMP domain H9K44_13280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_13290 PF01928 CYTH domain H9K44_13295 PF01865 Protein of unknown function DUF47 H9K44_13300 PF01384 Phosphate transporter family H9K44_13305 PF08239 Bacterial SH3 domain H9K44_13315 PF13401 AAA domain H9K44_13315 PF01471 Putative peptidoglycan binding domain H9K44_13320 PF01966 HD domain H9K44_13320 PF01743 Poly A polymerase head domain H9K44_13320 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K44_13325 PF02673 Bacitracin resistance protein BacA H9K44_13330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K44_13335 PF02152 Dihydroneopterin aldolase H9K44_13340 PF02660 Glycerol-3-phosphate acyltransferase H9K44_13345 PF12697 Alpha/beta hydrolase family H9K44_13350 PF00814 Glycoprotease family H9K44_13355 PF01165 Ribosomal protein S21 H9K44_13360 PF09424 Yqey-like protein H9K44_13365 PF01807 CHC2 zinc finger H9K44_13365 PF08278 DNA primase DnaG DnaB-binding H9K44_13365 PF08275 DNA primase catalytic core, N-terminal domain H9K44_13365 PF10410 DnaB-helicase binding domain of primase H9K44_13370 PF04546 Sigma-70, non-essential region H9K44_13370 PF03979 Sigma-70 factor, region 1.1 H9K44_13370 PF00140 Sigma-70 factor, region 1.2 H9K44_13370 PF04542 Sigma-70 region 2 H9K44_13370 PF04539 Sigma-70 region 3 H9K44_13370 PF04545 Sigma-70, region 4 H9K44_13385 PF13657 HipA N-terminal domain H9K44_13385 PF07804 HipA-like C-terminal domain H9K44_13390 PF03707 Bacterial signalling protein N terminal repeat H9K44_13390 PF00990 Diguanylate cyclase, GGDEF domain H9K44_13390 PF00563 EAL domain H9K44_13410 PF04851 Type III restriction enzyme, res subunit H9K44_13410 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H9K44_13410 PF00271 Helicase conserved C-terminal domain H9K44_13410 PF08463 EcoEI R protein C-terminal H9K44_13425 PF12161 HsdM N-terminal domain H9K44_13425 PF02384 N-6 DNA Methylase H9K44_13430 PF01420 Type I restriction modification DNA specificity domain H9K44_13460 PF03193 RsgA GTPase H9K44_13465 PF02899 Phage integrase, N-terminal SAM-like domain H9K44_13465 PF00589 Phage integrase family H9K44_13470 PF00990 Diguanylate cyclase, GGDEF domain H9K44_13470 PF08448 PAS fold H9K44_13500 PF03180 NLPA lipoprotein H9K44_13530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_13530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_13530 PF02378 Phosphotransferase system, EIIC H9K44_13535 PF08125 Mannitol dehydrogenase C-terminal domain H9K44_13535 PF01232 Mannitol dehydrogenase Rossmann domain H9K44_13540 PF05068 Mannitol repressor H9K44_13545 PF00158 Sigma-54 interaction domain H9K44_13545 PF00989 PAS fold H9K44_13545 PF02954 Bacterial regulatory protein, Fis family H9K44_13550 PF05524 PEP-utilising enzyme, N-terminal H9K44_13550 PF00391 PEP-utilising enzyme, mobile domain H9K44_13550 PF02896 PEP-utilising enzyme, TIM barrel domain H9K44_13555 PF02734 DAK2 domain H9K44_13560 PF02733 Dak1 domain H9K44_13565 PF00465 Iron-containing alcohol dehydrogenase H9K44_13570 PF00512 His Kinase A (phospho-acceptor) domain H9K44_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_13570 PF00672 HAMP domain H9K44_13575 PF00486 Transcriptional regulatory protein, C terminal H9K44_13575 PF00072 Response regulator receiver domain H9K44_13585 PF01380 SIS domain H9K44_13590 PF00455 DeoR C terminal sensor domain H9K44_13590 PF08220 DeoR-like helix-turn-helix domain H9K44_13595 PF00224 Pyruvate kinase, barrel domain H9K44_13595 PF02887 Pyruvate kinase, alpha/beta domain H9K44_13605 PF00990 Diguanylate cyclase, GGDEF domain H9K44_13610 PF10369 Small subunit of acetolactate synthase H9K44_13615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K44_13615 PF00205 Thiamine pyrophosphate enzyme, central domain H9K44_13615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K44_13620 PF00501 AMP-binding enzyme H9K44_13625 PF03466 LysR substrate binding domain H9K44_13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_13635 PF01569 PAP2 superfamily H9K44_13645 PF08502 LeuA allosteric (dimerisation) domain H9K44_13645 PF00682 HMGL-like H9K44_13650 PF00180 Isocitrate/isopropylmalate dehydrogenase H9K44_13655 PF00330 Aconitase family (aconitate hydratase) H9K44_13660 PF00694 Aconitase C-terminal domain H9K44_13670 PF05099 Tellurite resistance protein TerB H9K44_13670 PF00226 DnaJ domain H9K44_13675 PF03968 OstA-like protein H9K44_13675 PF04453 LPS transport system D H9K44_13680 PF09312 SurA N-terminal domain H9K44_13685 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H9K44_13690 PF00398 Ribosomal RNA adenine dimethylase H9K44_13695 PF04379 ApaG domain H9K44_13700 PF00149 Calcineurin-like phosphoesterase H9K44_13705 PF00186 Dihydrofolate reductase H9K44_13710 PF12821 Threonine/Serine exporter, ThrE H9K44_13715 PF06738 Putative threonine/serine exporter H9K44_13720 PF01926 50S ribosome-binding GTPase H9K44_13720 PF01018 GTP1/OBG H9K44_13725 PF01016 Ribosomal L27 protein H9K44_13730 PF00829 Ribosomal prokaryotic L21 protein H9K44_13735 PF00348 Polyprenyl synthetase H9K44_13745 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K44_13745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K44_13750 PF01316 Arginine repressor, DNA binding domain H9K44_13750 PF02863 Arginine repressor, C-terminal domain H9K44_13755 PF16868 NMT1-like family H9K44_13770 PF00005 ABC transporter H9K44_13775 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_13785 PF02441 Flavoprotein H9K44_13790 PF02875 Mur ligase family, glutamate ligase domain H9K44_13790 PF08245 Mur ligase middle domain H9K44_13790 PF01225 Mur ligase family, catalytic domain H9K44_13795 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H9K44_13800 PF00719 Inorganic pyrophosphatase H9K44_13810 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like H9K44_13815 PF04357 TamB, inner membrane protein subunit of TAM complex H9K44_13820 PF01103 Surface antigen H9K44_13820 PF17243 POTRA domain TamA domain 1 H9K44_13825 PF01625 Peptide methionine sulfoxide reductase H9K44_13830 PF06526 Protein of unknown function (DUF1107) H9K44_13835 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K44_13840 PF10795 Protein of unknown function (DUF2607) H9K44_13850 PF00005 ABC transporter H9K44_13875 PF02080 TrkA-C domain H9K44_13875 PF03600 Citrate transporter H9K44_13880 PF00009 Elongation factor Tu GTP binding domain H9K44_13885 PF01507 Phosphoadenosine phosphosulfate reductase family H9K44_13890 PF10414 Sirohaem synthase dimerisation region H9K44_13890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K44_13890 PF14824 Sirohaem biosynthesis protein central H9K44_13895 PF02872 5'-nucleotidase, C-terminal domain H9K44_13895 PF00149 Calcineurin-like phosphoesterase H9K44_13905 PF00270 DEAD/DEAH box helicase H9K44_13905 PF00271 Helicase conserved C-terminal domain H9K44_13905 PF03880 DbpA RNA binding domain H9K44_13910 PF13673 Acetyltransferase (GNAT) domain H9K44_13920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_13920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K44_13930 PF01196 Ribosomal protein L17 H9K44_13935 PF01000 RNA polymerase Rpb3/RpoA insert domain H9K44_13935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H9K44_13935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H9K44_13940 PF00163 Ribosomal protein S4/S9 N-terminal domain H9K44_13940 PF01479 S4 domain H9K44_13945 PF00411 Ribosomal protein S11 H9K44_13950 PF00416 Ribosomal protein S13/S18 H9K44_13955 PF00444 Ribosomal protein L36 H9K44_13960 PF00344 SecY translocase H9K44_13965 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H9K44_13970 PF00327 Ribosomal protein L30p/L7e H9K44_13975 PF00333 Ribosomal protein S5, N-terminal domain H9K44_13975 PF03719 Ribosomal protein S5, C-terminal domain H9K44_13980 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H9K44_13985 PF00347 Ribosomal protein L6 H9K44_13990 PF00410 Ribosomal protein S8 H9K44_13995 PF00253 Ribosomal protein S14p/S29e H9K44_14000 PF00281 Ribosomal protein L5 H9K44_14000 PF00673 ribosomal L5P family C-terminus H9K44_14005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H9K44_14005 PF00467 KOW motif H9K44_14010 PF00238 Ribosomal protein L14p/L23e H9K44_14015 PF00366 Ribosomal protein S17 H9K44_14020 PF00831 Ribosomal L29 protein H9K44_14025 PF00252 Ribosomal protein L16p/L10e H9K44_14030 PF07650 KH domain H9K44_14030 PF00189 Ribosomal protein S3, C-terminal domain H9K44_14035 PF00237 Ribosomal protein L22p/L17e H9K44_14040 PF00203 Ribosomal protein S19 H9K44_14045 PF00181 Ribosomal Proteins L2, RNA binding domain H9K44_14045 PF03947 Ribosomal Proteins L2, C-terminal domain H9K44_14050 PF00276 Ribosomal protein L23 H9K44_14055 PF00573 Ribosomal protein L4/L1 family H9K44_14060 PF00297 Ribosomal protein L3 H9K44_14065 PF00338 Ribosomal protein S10p/S20e H9K44_14070 PF01197 Ribosomal protein L31 H9K44_14075 PF00271 Helicase conserved C-terminal domain H9K44_14075 PF17764 3′ DNA-binding domain (3′BD) H9K44_14075 PF00270 DEAD/DEAH box helicase H9K44_14075 PF18074 Primosomal protein N C-terminal domain H9K44_14075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H9K44_14080 PF00356 Bacterial regulatory proteins, lacI family H9K44_14090 PF00227 Proteasome subunit H9K44_14095 PF07724 AAA domain (Cdc48 subfamily) H9K44_14095 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_14100 PF01040 UbiA prenyltransferase family H9K44_14105 PF03737 Aldolase/RraA H9K44_14110 PF06005 Cell division protein ZapB H9K44_14115 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H9K44_14120 PF00455 DeoR C terminal sensor domain H9K44_14120 PF08220 DeoR-like helix-turn-helix domain H9K44_14140 PF00121 Triosephosphate isomerase H9K44_14145 PF00483 Nucleotidyl transferase H9K44_14150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H9K44_14150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H9K44_14150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H9K44_14160 PF13439 Glycosyltransferase Family 4 H9K44_14160 PF00534 Glycosyl transferases group 1 H9K44_14175 PF00534 Glycosyl transferases group 1 H9K44_14190 PF00535 Glycosyl transferase family 2 H9K44_14200 PF01943 Polysaccharide biosynthesis protein H9K44_14205 PF01370 NAD dependent epimerase/dehydratase family H9K44_14210 PF00953 Glycosyl transferase family 4 H9K44_14215 PF00753 Metallo-beta-lactamase superfamily H9K44_14215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H9K44_14215 PF10996 Beta-Casp domain H9K44_14220 PF02397 Bacterial sugar transferase H9K44_14225 PF00535 Glycosyl transferase family 2 H9K44_14240 PF13439 Glycosyltransferase Family 4 H9K44_14240 PF00534 Glycosyl transferases group 1 H9K44_14245 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase H9K44_14255 PF01467 Cytidylyltransferase-like H9K44_14265 PF02563 Polysaccharide biosynthesis/export protein H9K44_14265 PF10531 SLBB domain H9K44_14265 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H9K44_14290 PF06082 Exopolysaccharide biosynthesis protein YbjH H9K44_14295 PF01370 NAD dependent epimerase/dehydratase family H9K44_14300 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K44_14310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K44_14315 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H9K44_14320 PF00682 HMGL-like H9K44_14320 PF07836 DmpG-like communication domain H9K44_14345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9K44_14355 PF05523 WxcM-like, C-terminal H9K44_14360 PF00483 Nucleotidyl transferase H9K44_14365 PF16363 GDP-mannose 4,6 dehydratase H9K44_14375 PF01219 Prokaryotic diacylglycerol kinase H9K44_14380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K44_14385 PF00535 Glycosyl transferase family 2 H9K44_14390 PF00535 Glycosyl transferase family 2 H9K44_14395 PF05686 Glycosyl transferase family 90 H9K44_14400 PF01467 Cytidylyltransferase-like H9K44_14405 PF06827 Zinc finger found in FPG and IleRS H9K44_14405 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H9K44_14405 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H9K44_14415 PF00471 Ribosomal protein L33 H9K44_14420 PF00830 Ribosomal L28 family H9K44_14425 PF04002 RadC-like JAB domain H9K44_14430 PF17200 Single Cache domain 2 H9K44_14430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_14430 PF00672 HAMP domain H9K44_14435 PF02441 Flavoprotein H9K44_14435 PF04127 DNA / pantothenate metabolism flavoprotein H9K44_14440 PF00440 Bacterial regulatory proteins, tetR family H9K44_14445 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K44_14450 PF00156 Phosphoribosyl transferase domain H9K44_14455 PF01138 3' exoribonuclease family, domain 1 H9K44_14455 PF03725 3' exoribonuclease family, domain 2 H9K44_14460 PF08340 Domain of unknown function (DUF1732) H9K44_14460 PF03755 YicC-like family, N-terminal region H9K44_14480 PF06114 IrrE N-terminal-like domain H9K44_14500 PF11867 Domain of unknown function (DUF3387) H9K44_14500 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H9K44_14500 PF18766 SWI2/SNF2 ATPase H9K44_14505 PF01420 Type I restriction modification DNA specificity domain H9K44_14510 PF12161 HsdM N-terminal domain H9K44_14510 PF02384 N-6 DNA Methylase H9K44_14515 PF00270 DEAD/DEAH box helicase H9K44_14515 PF17191 RecG wedge domain H9K44_14515 PF13749 Putative ATP-dependent DNA helicase recG C-terminal H9K44_14525 PF02384 N-6 DNA Methylase H9K44_14555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_14555 PF00005 ABC transporter H9K44_14560 PF00005 ABC transporter H9K44_14560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_14565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_14570 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_14570 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_14575 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_14580 PF07715 TonB-dependent Receptor Plug Domain H9K44_14580 PF00593 TonB dependent receptor H9K44_14595 PF01618 MotA/TolQ/ExbB proton channel family H9K44_14600 PF02472 Biopolymer transport protein ExbD/TolR H9K44_14615 PF00625 Guanylate kinase H9K44_14620 PF01192 RNA polymerase Rpb6 H9K44_14625 PF13291 ACT domain H9K44_14625 PF04607 Region found in RelA / SpoT proteins H9K44_14625 PF02824 TGS domain H9K44_14630 PF00588 SpoU rRNA Methylase family H9K44_14630 PF12105 SpoU, rRNA methylase, C-terminal H9K44_14635 PF00271 Helicase conserved C-terminal domain H9K44_14635 PF00270 DEAD/DEAH box helicase H9K44_14635 PF17191 RecG wedge domain H9K44_14640 PF00860 Permease family H9K44_14645 PF00672 HAMP domain H9K44_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_14645 PF00512 His Kinase A (phospho-acceptor) domain H9K44_14650 PF00486 Transcriptional regulatory protein, C terminal H9K44_14650 PF00072 Response regulator receiver domain H9K44_14660 PF03449 Transcription elongation factor, N-terminal H9K44_14660 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K44_14670 PF00575 S1 RNA binding domain H9K44_14670 PF09371 Tex-like protein N-terminal domain H9K44_14670 PF16921 Tex protein YqgF-like domain H9K44_14670 PF17674 HHH domain H9K44_14680 PF00561 alpha/beta hydrolase fold H9K44_14685 PF00156 Phosphoribosyl transferase domain H9K44_14690 PF01521 Iron-sulphur cluster biosynthesis H9K44_14690 PF01106 NifU-like domain H9K44_14695 PF00293 NUDIX domain H9K44_14700 PF00459 Inositol monophosphatase family H9K44_14705 PF01203 Type II secretion system (T2SS), protein N H9K44_14710 PF04612 Type II secretion system (T2SS), protein M H9K44_14715 PF12693 GspL periplasmic domain H9K44_14715 PF05134 Type II secretion system (T2SS), protein L H9K44_14720 PF03934 Type II secretion system (T2SS), protein K H9K44_14725 PF11612 Type II secretion system (T2SS), protein J H9K44_14725 PF07963 Prokaryotic N-terminal methylation motif H9K44_14730 PF07963 Prokaryotic N-terminal methylation motif H9K44_14730 PF02501 Type II secretion system (T2SS), protein I H9K44_14735 PF12019 Type II transport protein GspH H9K44_14740 PF07963 Prokaryotic N-terminal methylation motif H9K44_14740 PF08334 Type II secretion system (T2SS), protein G H9K44_14745 PF00482 Type II secretion system (T2SS), protein F H9K44_14750 PF00437 Type II/IV secretion system protein H9K44_14755 PF00263 Bacterial type II and III secretion system protein H9K44_14755 PF03958 Bacterial type II/III secretion system short domain H9K44_14760 PF11356 Type II secretion system protein C H9K44_14765 PF01479 S4 domain H9K44_14770 PF01430 Hsp33 protein H9K44_14775 PF01293 Phosphoenolpyruvate carboxykinase H9K44_14785 PF00583 Acetyltransferase (GNAT) family H9K44_14785 PF09500 Putative thioesterase (yiiD_Cterm) H9K44_14790 PF02580 D-Tyr-tRNA(Tyr) deacylase H9K44_14795 PF03631 Virulence factor BrkB H9K44_14810 PF00679 Elongation factor G C-terminus H9K44_14810 PF03144 Elongation factor Tu domain 2 H9K44_14810 PF00009 Elongation factor Tu GTP binding domain H9K44_14815 PF00120 Glutamine synthetase, catalytic domain H9K44_14815 PF03951 Glutamine synthetase, beta-Grasp domain H9K44_14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_14825 PF00512 His Kinase A (phospho-acceptor) domain H9K44_14825 PF00989 PAS fold H9K44_14830 PF00072 Response regulator receiver domain H9K44_14830 PF00158 Sigma-54 interaction domain H9K44_14830 PF02954 Bacterial regulatory protein, Fis family H9K44_14835 PF00563 EAL domain H9K44_14835 PF00990 Diguanylate cyclase, GGDEF domain H9K44_14835 PF03707 Bacterial signalling protein N terminal repeat H9K44_14840 PF00962 Adenosine/AMP deaminase H9K44_14845 PF04055 Radical SAM superfamily H9K44_14845 PF06969 HemN C-terminal domain H9K44_14850 PF10675 Protein of unknown function (DUF2489) H9K44_14855 PF04220 Der GTPase activator (YihI) H9K44_14870 PF00034 Cytochrome c H9K44_14875 PF01926 50S ribosome-binding GTPase H9K44_14880 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K44_14880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K44_14880 PF00476 DNA polymerase family A H9K44_14880 PF01612 3'-5' exonuclease H9K44_14890 PF00490 Delta-aminolevulinic acid dehydratase H9K44_14895 PF01026 TatD related DNase H9K44_14900 PF00902 Sec-independent protein translocase protein (TatC) H9K44_14905 PF02416 mttA/Hcf106 family H9K44_14910 PF02416 mttA/Hcf106 family H9K44_14915 PF03109 ABC1 family H9K44_14920 PF02036 SCP-2 sterol transfer family H9K44_14925 PF01209 ubiE/COQ5 methyltransferase family H9K44_14930 PF02646 RmuC family H9K44_14940 PF00563 EAL domain H9K44_14940 PF03707 Bacterial signalling protein N terminal repeat H9K44_14940 PF00990 Diguanylate cyclase, GGDEF domain H9K44_14945 PF01594 AI-2E family transporter H9K44_14995 PF04972 BON domain H9K44_15000 PF01590 GAF domain H9K44_15000 PF00158 Sigma-54 interaction domain H9K44_15000 PF02954 Bacterial regulatory protein, Fis family H9K44_15010 PF10625 Universal stress protein B (UspB) H9K44_15015 PF00210 Ferritin-like domain H9K44_15020 PF00582 Universal stress protein family H9K44_15025 PF00892 EamA-like transporter family H9K44_15035 PF04445 Putative SAM-dependent methyltransferase H9K44_15040 PF08448 PAS fold H9K44_15040 PF00990 Diguanylate cyclase, GGDEF domain H9K44_15040 PF00563 EAL domain H9K44_15045 PF01037 Lrp/AsnC ligand binding domain H9K44_15050 PF01432 Peptidase family M3 H9K44_15055 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H9K44_15060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K44_15060 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15065 PF03466 LysR substrate binding domain H9K44_15070 PF01048 Phosphorylase superfamily H9K44_15075 PF01081 KDPG and KHG aldolase H9K44_15080 PF02447 GntP family permease H9K44_15085 PF01202 Shikimate kinase H9K44_15090 PF00920 Dehydratase family H9K44_15095 PF00893 Small Multidrug Resistance protein H9K44_15100 PF00893 Small Multidrug Resistance protein H9K44_15105 PF03466 LysR substrate binding domain H9K44_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K44_15110 PF00356 Bacterial regulatory proteins, lacI family H9K44_15115 PF00069 Protein kinase domain H9K44_15145 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K44_15145 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_15150 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_15155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_15160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_15160 PF00005 ABC transporter H9K44_15165 PF13419 Haloacid dehalogenase-like hydrolase H9K44_15195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K44_15200 PF00580 UvrD/REP helicase N-terminal domain H9K44_15200 PF13361 UvrD-like helicase C-terminal domain H9K44_15205 PF16295 Tetracyclin repressor-like, C-terminal domain H9K44_15205 PF00440 Bacterial regulatory proteins, tetR family H9K44_15210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_15215 PF00873 AcrB/AcrD/AcrF family H9K44_15220 PF04380 Membrane fusogenic activity H9K44_15225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H9K44_15225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H9K44_15230 PF03466 LysR substrate binding domain H9K44_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15265 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_15270 PF07369 Protein of unknown function (DUF1488) H9K44_15275 PF08501 Shikimate dehydrogenase substrate binding domain H9K44_15275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H9K44_15275 PF01488 Shikimate / quinate 5-dehydrogenase H9K44_15280 PF01218 Coproporphyrinogen III oxidase H9K44_15285 PF01300 Telomere recombination H9K44_15290 PF00731 AIR carboxylase H9K44_15295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H9K44_15295 PF02222 ATP-grasp domain H9K44_15300 PF01396 Topoisomerase DNA binding C4 zinc finger H9K44_15305 PF04361 Protein of unknown function (DUF494) H9K44_15310 PF02481 DNA recombination-mediator protein A H9K44_15310 PF17782 DprA winged helix domain H9K44_15320 PF01327 Polypeptide deformylase H9K44_15325 PF00551 Formyl transferase H9K44_15325 PF02911 Formyl transferase, C-terminal domain H9K44_15330 PF01029 NusB family H9K44_15330 PF01189 16S rRNA methyltransferase RsmB/F H9K44_15335 PF02254 TrkA-N domain H9K44_15335 PF02080 TrkA-C domain H9K44_15340 PF02386 Cation transport protein H9K44_15350 PF03006 Haemolysin-III related H9K44_15355 PF07070 SpoOM protein H9K44_15360 PF06288 Protein of unknown function (DUF1040) H9K44_15365 PF13746 4Fe-4S dicluster domain H9K44_15365 PF12801 4Fe-4S binding domain H9K44_15365 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase H9K44_15370 PF01636 Phosphotransferase enzyme family H9K44_15375 PF01323 DSBA-like thioredoxin domain H9K44_15380 PF01553 Acyltransferase H9K44_15420 PF02796 Helix-turn-helix domain of resolvase H9K44_15420 PF00239 Resolvase, N terminal domain H9K44_15425 PF00205 Thiamine pyrophosphate enzyme, central domain H9K44_15425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K44_15425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K44_15435 PF01063 Amino-transferase class IV H9K44_15440 PF00920 Dehydratase family H9K44_15445 PF00585 C-terminal regulatory domain of Threonine dehydratase H9K44_15445 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_15450 PF03466 LysR substrate binding domain H9K44_15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15455 PF07690 Major Facilitator Superfamily H9K44_15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_15465 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_15470 PF12804 MobA-like NTP transferase domain H9K44_15470 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_15475 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H9K44_15475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H9K44_15480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_15480 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K44_15485 PF00231 ATP synthase H9K44_15490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_15490 PF00306 ATP synthase alpha/beta chain, C terminal domain H9K44_15490 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K44_15495 PF00213 ATP synthase delta (OSCP) subunit H9K44_15500 PF00430 ATP synthase B/B' CF(0) H9K44_15505 PF00137 ATP synthase subunit C H9K44_15510 PF00119 ATP synthase A chain H9K44_15515 PF03899 ATP synthase I chain H9K44_15520 PF17762 HTH domain found in ParB protein H9K44_15520 PF02195 ParB-like nuclease domain H9K44_15525 PF13614 AAA domain H9K44_15530 PF02527 rRNA small subunit methyltransferase G H9K44_15535 PF01134 Glucose inhibited division protein A H9K44_15535 PF13932 GidA associated domain H9K44_15540 PF00258 Flavodoxin H9K44_15555 PF01381 Helix-turn-helix H9K44_15610 PF02899 Phage integrase, N-terminal SAM-like domain H9K44_15610 PF00589 Phage integrase family H9K44_15615 PF12631 MnmE helical domain H9K44_15615 PF10396 GTP-binding protein TrmE N-terminus H9K44_15615 PF01926 50S ribosome-binding GTPase H9K44_15620 PF02096 60Kd inner membrane protein H9K44_15620 PF14849 YidC periplasmic domain H9K44_15625 PF01809 Putative membrane protein insertion efficiency factor H9K44_15630 PF00825 Ribonuclease P H9K44_15635 PF00468 Ribosomal protein L34 H9K44_15640 PF00005 ABC transporter H9K44_15645 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_15650 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_15665 PF01047 MarR family H9K44_15675 PF01734 Patatin-like phospholipase H9K44_15680 PF05726 Pirin C-terminal cupin domain H9K44_15680 PF02678 Pirin H9K44_15685 PF00313 'Cold-shock' DNA-binding domain H9K44_15700 PF00962 Adenosine/AMP deaminase H9K44_15705 PF00462 Glutaredoxin H9K44_15705 PF08534 Redoxin H9K44_15720 PF00768 D-alanyl-D-alanine carboxypeptidase H9K44_15720 PF07943 Penicillin-binding protein 5, C-terminal domain H9K44_15725 PF02798 Glutathione S-transferase, N-terminal domain H9K44_15730 PF02909 Tetracyclin repressor-like, C-terminal domain H9K44_15730 PF00440 Bacterial regulatory proteins, tetR family H9K44_15735 PF01872 RibD C-terminal domain H9K44_15790 PF12833 Helix-turn-helix domain H9K44_15790 PF01497 Periplasmic binding protein H9K44_15795 PF00155 Aminotransferase class I and II H9K44_15820 PF00271 Helicase conserved C-terminal domain H9K44_15820 PF00270 DEAD/DEAH box helicase H9K44_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15830 PF03466 LysR substrate binding domain H9K44_15835 PF03466 LysR substrate binding domain H9K44_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K44_15850 PF00107 Zinc-binding dehydrogenase H9K44_15850 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_15865 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9K44_15865 PF12833 Helix-turn-helix domain H9K44_15870 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H9K44_15885 PF03466 LysR substrate binding domain H9K44_15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15890 PF00709 Adenylosuccinate synthetase H9K44_15895 PF00710 Asparaginase, N-terminal H9K44_15895 PF17763 Glutaminase/Asparaginase C-terminal domain H9K44_15900 PF03618 Kinase/pyrophosphorylase H9K44_15905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H9K44_15905 PF02896 PEP-utilising enzyme, TIM barrel domain H9K44_15905 PF00391 PEP-utilising enzyme, mobile domain H9K44_15920 PF00579 tRNA synthetases class I (W and Y) H9K44_15925 PF13416 Bacterial extracellular solute-binding protein H9K44_15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_15935 PF03466 LysR substrate binding domain H9K44_15940 PF13533 Biotin-lipoyl like H9K44_15945 PF00873 AcrB/AcrD/AcrF family H9K44_15960 PF00990 Diguanylate cyclase, GGDEF domain H9K44_15960 PF07694 5TMR of 5TMR-LYT H9K44_15970 PF00196 Bacterial regulatory proteins, luxR family H9K44_15975 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K44_15975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K44_15975 PF00703 Glycosyl hydrolases family 2 H9K44_15975 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H9K44_15980 PF02028 BCCT, betaine/carnitine/choline family transporter H9K44_15985 PF07702 UTRA domain H9K44_15985 PF00392 Bacterial regulatory proteins, gntR family H9K44_16010 PF08402 TOBE domain H9K44_16010 PF00005 ABC transporter H9K44_16050 PF00873 AcrB/AcrD/AcrF family H9K44_16055 PF13533 Biotin-lipoyl like H9K44_16060 PF13091 PLD-like domain H9K44_16085 PF00376 MerR family regulatory protein H9K44_16085 PF09278 MerR, DNA binding H9K44_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16095 PF03466 LysR substrate binding domain H9K44_16105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H9K44_16105 PF13378 Enolase C-terminal domain-like H9K44_16110 PF00009 Elongation factor Tu GTP binding domain H9K44_16110 PF00679 Elongation factor G C-terminus H9K44_16110 PF03144 Elongation factor Tu domain 2 H9K44_16110 PF03764 Elongation factor G, domain IV H9K44_16110 PF14492 Elongation Factor G, domain II H9K44_16135 PF02001 Protein of unknown function DUF134 H9K44_16140 PF04170 NlpE N-terminal domain H9K44_16140 PF17185 NlpE C-terminal OB domain H9K44_16145 PF06629 MltA-interacting protein MipA H9K44_16155 PF01389 OmpA-like transmembrane domain H9K44_16155 PF00691 OmpA family H9K44_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16160 PF03466 LysR substrate binding domain H9K44_16185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H9K44_16185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H9K44_16195 PF00857 Isochorismatase family H9K44_16205 PF00199 Catalase H9K44_16205 PF06628 Catalase-related immune-responsive H9K44_16215 PF08220 DeoR-like helix-turn-helix domain H9K44_16215 PF00455 DeoR C terminal sensor domain H9K44_16220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_16225 PF01641 SelR domain H9K44_16225 PF01625 Peptide methionine sulfoxide reductase H9K44_16245 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K44_16245 PF07971 Glycosyl hydrolase family 92 H9K44_16250 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K44_16250 PF07971 Glycosyl hydrolase family 92 H9K44_16260 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K44_16260 PF07971 Glycosyl hydrolase family 92 H9K44_16265 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K44_16265 PF07971 Glycosyl hydrolase family 92 H9K44_16270 PF03060 Nitronate monooxygenase H9K44_16275 PF02872 5'-nucleotidase, C-terminal domain H9K44_16275 PF00149 Calcineurin-like phosphoesterase H9K44_16285 PF08359 YsiA-like protein, C-terminal region H9K44_16285 PF00440 Bacterial regulatory proteins, tetR family H9K44_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16300 PF03466 LysR substrate binding domain H9K44_16305 PF01810 LysE type translocator H9K44_16320 PF00118 TCP-1/cpn60 chaperonin family H9K44_16325 PF00166 Chaperonin 10 Kd subunit H9K44_16330 PF00581 Rhodanese-like domain H9K44_16355 PF01070 FMN-dependent dehydrogenase H9K44_16375 PF00669 Bacterial flagellin N-terminal helical region H9K44_16380 PF00460 Flagella basal body rod protein H9K44_16380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_16385 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K44_16385 PF10135 Rod binding protein H9K44_16390 PF02119 Flagellar P-ring protein H9K44_16395 PF02107 Flagellar L-ring protein H9K44_16400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_16400 PF00460 Flagella basal body rod protein H9K44_16405 PF00460 Flagella basal body rod protein H9K44_16405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_16410 PF07559 Flagellar basal body protein FlaE H9K44_16410 PF00460 Flagella basal body rod protein H9K44_16410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_16415 PF13860 FlgD Ig-like domain H9K44_16415 PF13861 FlgD Tudor-like domain H9K44_16415 PF03963 Flagellar hook capping protein - N-terminal region H9K44_16420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K44_16420 PF00460 Flagella basal body rod protein H9K44_16425 PF00460 Flagella basal body rod protein H9K44_16445 PF01464 Transglycosylase SLT domain H9K44_16450 PF08264 Anticodon-binding domain of tRNA H9K44_16450 PF00133 tRNA synthetases class I (I, L, M and V) H9K44_16470 PF03313 Serine dehydratase alpha chain H9K44_16470 PF03315 Serine dehydratase beta chain H9K44_16475 PF00854 POT family H9K44_16485 PF03466 LysR substrate binding domain H9K44_16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16495 PF03466 LysR substrate binding domain H9K44_16500 PF00691 OmpA family H9K44_16500 PF01389 OmpA-like transmembrane domain H9K44_16505 PF18027 Cytosolic carboxypeptidase N-terminal domain H9K44_16505 PF00246 Zinc carboxypeptidase H9K44_16510 PF01266 FAD dependent oxidoreductase H9K44_16520 PF04393 Protein of unknown function (DUF535) H9K44_16535 PF07702 UTRA domain H9K44_16535 PF00392 Bacterial regulatory proteins, gntR family H9K44_16540 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_16545 PF00005 ABC transporter H9K44_16560 PF00266 Aminotransferase class-V H9K44_16565 PF00202 Aminotransferase class-III H9K44_16570 PF13419 Haloacid dehalogenase-like hydrolase H9K44_16575 PF00356 Bacterial regulatory proteins, lacI family H9K44_16580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_16590 PF03611 PTS system sugar-specific permease component H9K44_16600 PF05922 Peptidase inhibitor I9 H9K44_16600 PF00082 Subtilase family H9K44_16605 PF00657 GDSL-like Lipase/Acylhydrolase H9K44_16610 PF02321 Outer membrane efflux protein H9K44_16615 PF02687 FtsX-like permease family H9K44_16615 PF12704 MacB-like periplasmic core domain H9K44_16615 PF00005 ABC transporter H9K44_16620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_16625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K44_16630 PF00194 Eukaryotic-type carbonic anhydrase H9K44_16635 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K44_16650 PF13419 Haloacid dehalogenase-like hydrolase H9K44_16655 PF03466 LysR substrate binding domain H9K44_16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16690 PF14602 Hexapeptide repeat of succinyl-transferase H9K44_16690 PF12464 Maltose acetyltransferase H9K44_16695 PF02566 OsmC-like protein H9K44_16700 PF01641 SelR domain H9K44_16700 PF01625 Peptide methionine sulfoxide reductase H9K44_16715 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H9K44_16725 PF00990 Diguanylate cyclase, GGDEF domain H9K44_16740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_16740 PF00672 HAMP domain H9K44_16740 PF12729 Four helix bundle sensory module for signal transduction H9K44_16745 PF05230 MASE2 domain H9K44_16745 PF00990 Diguanylate cyclase, GGDEF domain H9K44_16750 PF13532 2OG-Fe(II) oxygenase superfamily H9K44_16760 PF01773 Na+ dependent nucleoside transporter N-terminus H9K44_16760 PF07662 Na+ dependent nucleoside transporter C-terminus H9K44_16760 PF07670 Nucleoside recognition H9K44_16775 PF01212 Beta-eliminating lyase H9K44_16785 PF01266 FAD dependent oxidoreductase H9K44_16800 PF05525 Branched-chain amino acid transport protein H9K44_16805 PF00990 Diguanylate cyclase, GGDEF domain H9K44_16805 PF08448 PAS fold H9K44_16810 PF02954 Bacterial regulatory protein, Fis family H9K44_16810 PF00158 Sigma-54 interaction domain H9K44_16810 PF00072 Response regulator receiver domain H9K44_16815 PF00512 His Kinase A (phospho-acceptor) domain H9K44_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_16815 PF02743 Cache domain H9K44_16825 PF00232 Glycosyl hydrolase family 1 H9K44_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_16850 PF03466 LysR substrate binding domain H9K44_16855 PF18030 RimK PreATP-grasp domain H9K44_16855 PF08443 RimK-like ATP-grasp domain H9K44_16860 PF18030 RimK PreATP-grasp domain H9K44_16860 PF08443 RimK-like ATP-grasp domain H9K44_16865 PF00753 Metallo-beta-lactamase superfamily H9K44_16870 PF17810 Arginine decarboxylase helical bundle domain H9K44_16870 PF17944 Arginine decarboxylase C-terminal helical extension H9K44_16870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K44_16875 PF00491 Arginase family H9K44_16880 PF07690 Major Facilitator Superfamily H9K44_16885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K44_16885 PF00326 Prolyl oligopeptidase family H9K44_16900 PF00950 ABC 3 transport family H9K44_16905 PF00005 ABC transporter H9K44_16910 PF01297 Zinc-uptake complex component A periplasmic H9K44_16950 PF02472 Biopolymer transport protein ExbD/TolR H9K44_16955 PF01618 MotA/TolQ/ExbB proton channel family H9K44_16960 PF01618 MotA/TolQ/ExbB proton channel family H9K44_16970 PF00593 TonB dependent receptor H9K44_16970 PF07715 TonB-dependent Receptor Plug Domain H9K44_16975 PF00512 His Kinase A (phospho-acceptor) domain H9K44_16975 PF00672 HAMP domain H9K44_16975 PF16750 Sensor domain of 2-component histidine kinase H9K44_16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_16980 PF00072 Response regulator receiver domain H9K44_16980 PF00486 Transcriptional regulatory protein, C terminal H9K44_16985 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K44_16985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K44_16990 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K44_17000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K44_17000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K44_17005 PF10928 Protein of unknown function (DUF2810) H9K44_17055 PF04013 Putative SAM-dependent RNA methyltransferase H9K44_17060 PF01523 Putative modulator of DNA gyrase H9K44_17065 PF01523 Putative modulator of DNA gyrase H9K44_17070 PF08543 Phosphomethylpyrimidine kinase H9K44_17075 PF00005 ABC transporter H9K44_17080 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_17085 PF09084 NMT1/THI5 like H9K44_17090 PF03070 TENA/THI-4/PQQC family H9K44_17095 PF02110 Hydroxyethylthiazole kinase family H9K44_17100 PF02581 Thiamine monophosphate synthase H9K44_17110 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K44_17110 PF00384 Molybdopterin oxidoreductase H9K44_17110 PF01568 Molydopterin dinucleotide binding domain H9K44_17115 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K44_17160 PF00392 Bacterial regulatory proteins, gntR family H9K44_17160 PF00155 Aminotransferase class I and II H9K44_17165 PF02595 Glycerate kinase family H9K44_17170 PF02447 GntP family permease H9K44_17175 PF05651 Putative sugar diacid recognition H9K44_17175 PF17853 GGDEF-like domain H9K44_17175 PF13556 PucR C-terminal helix-turn-helix domain H9K44_17200 PF13419 Haloacid dehalogenase-like hydrolase H9K44_17215 PF03466 LysR substrate binding domain H9K44_17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17225 PF03466 LysR substrate binding domain H9K44_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_17235 PF01661 Macro domain H9K44_17240 PF01204 Trehalase H9K44_17250 PF12706 Beta-lactamase superfamily domain H9K44_17260 PF07690 Major Facilitator Superfamily H9K44_17265 PF13533 Biotin-lipoyl like H9K44_17270 PF03922 OmpW family H9K44_17275 PF13599 Pentapeptide repeats (9 copies) H9K44_17290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K44_17290 PF18416 N-acetylglucosamine binding protein domain 2 H9K44_17295 PF01037 Lrp/AsnC ligand binding domain H9K44_17300 PF01810 LysE type translocator H9K44_17305 PF04954 Siderophore-interacting protein H9K44_17305 PF08021 Siderophore-interacting FAD-binding domain H9K44_17310 PF14583 Oligogalacturonate lyase H9K44_17315 PF00474 Sodium:solute symporter family H9K44_17320 PF13229 Right handed beta helix region H9K44_17335 PF01081 KDPG and KHG aldolase H9K44_17340 PF00294 pfkB family carbohydrate kinase H9K44_17355 PF07883 Cupin domain H9K44_17360 PF10688 Bacterial inner membrane protein H9K44_17370 PF01614 Bacterial transcriptional regulator H9K44_17370 PF09339 IclR helix-turn-helix domain H9K44_17385 PF03466 LysR substrate binding domain H9K44_17385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17390 PF00797 N-acetyltransferase H9K44_17395 PF00107 Zinc-binding dehydrogenase H9K44_17395 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_17400 PF00756 Putative esterase H9K44_17410 PF17152 Periplasmic sensor domain H9K44_17410 PF00990 Diguanylate cyclase, GGDEF domain H9K44_17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17425 PF03466 LysR substrate binding domain H9K44_17440 PF00849 RNA pseudouridylate synthase H9K44_17445 PF01554 MatE H9K44_17450 PF00990 Diguanylate cyclase, GGDEF domain H9K44_17450 PF00563 EAL domain H9K44_17460 PF06865 Pyrimidine/purine nucleoside phosphorylase H9K44_17470 PF00704 Glycosyl hydrolases family 18 H9K44_17470 PF08329 Chitinase A, N-terminal domain H9K44_17490 PF03600 Citrate transporter H9K44_17500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K44_17510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9K44_17510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K44_17515 PF06029 AlkA N-terminal domain H9K44_17515 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K44_17525 PF07681 DoxX H9K44_17530 PF02678 Pirin H9K44_17530 PF17954 Quercetinase C-terminal cupin domain H9K44_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17535 PF03466 LysR substrate binding domain H9K44_17550 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9K44_17560 PF03616 Sodium/glutamate symporter H9K44_17565 PF00155 Aminotransferase class I and II H9K44_17565 PF00392 Bacterial regulatory proteins, gntR family H9K44_17570 PF00005 ABC transporter H9K44_17580 PF03616 Sodium/glutamate symporter H9K44_17585 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_17600 PF00672 HAMP domain H9K44_17600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_17600 PF17200 Single Cache domain 2 H9K44_17605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K44_17615 PF04397 LytTr DNA-binding domain H9K44_17615 PF00072 Response regulator receiver domain H9K44_17620 PF06580 Histidine kinase H9K44_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_17620 PF07694 5TMR of 5TMR-LYT H9K44_17620 PF13492 GAF domain H9K44_17640 PF00005 ABC transporter H9K44_17650 PF01098 Cell cycle protein H9K44_17655 PF01709 Transcriptional regulator H9K44_17665 PF00072 Response regulator receiver domain H9K44_17665 PF00512 His Kinase A (phospho-acceptor) domain H9K44_17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_17665 PF00672 HAMP domain H9K44_17665 PF01627 Hpt domain H9K44_17665 PF17149 Periplasmic sensor domain found in signal transduction proteins H9K44_17675 PF00925 GTP cyclohydrolase II H9K44_17675 PF08719 Domain of unknown function (DUF1768) H9K44_17685 PF00005 ABC transporter H9K44_17685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_17690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_17690 PF00005 ABC transporter H9K44_17705 PF18607 ParA helix turn helix domain H9K44_17705 PF13614 AAA domain H9K44_17710 PF02195 ParB-like nuclease domain H9K44_17710 PF08775 ParB family H9K44_17715 PF13718 GNAT acetyltransferase 2 H9K44_17715 PF05127 Helicase H9K44_17725 PF00132 Bacterial transferase hexapeptide (six repeats) H9K44_17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17730 PF03466 LysR substrate binding domain H9K44_17735 PF03575 Peptidase family S51 H9K44_17740 PF00267 Gram-negative porin H9K44_17745 PF02378 Phosphotransferase system, EIIC H9K44_17745 PF00367 phosphotransferase system, EIIB H9K44_17750 PF01380 SIS domain H9K44_17755 PF01418 Helix-turn-helix domain, rpiR family H9K44_17755 PF01380 SIS domain H9K44_17760 PF00246 Zinc carboxypeptidase H9K44_17765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_17770 PF03358 NADPH-dependent FMN reductase H9K44_17780 PF00005 ABC transporter H9K44_17780 PF00664 ABC transporter transmembrane region H9K44_17780 PF03412 Peptidase C39 family H9K44_17795 PF00529 HlyD membrane-fusion protein of T1SS H9K44_17800 PF00158 Sigma-54 interaction domain H9K44_17800 PF00072 Response regulator receiver domain H9K44_17800 PF02954 Bacterial regulatory protein, Fis family H9K44_17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_17805 PF00512 His Kinase A (phospho-acceptor) domain H9K44_17805 PF02743 Cache domain H9K44_17815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H9K44_17815 PF01243 Pyridoxamine 5'-phosphate oxidase H9K44_17825 PF12833 Helix-turn-helix domain H9K44_17830 PF00171 Aldehyde dehydrogenase family H9K44_17830 PF01619 Proline dehydrogenase H9K44_17830 PF14850 DNA-binding domain of Proline dehydrogenase H9K44_17830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H9K44_17840 PF00474 Sodium:solute symporter family H9K44_17875 PF01037 Lrp/AsnC ligand binding domain H9K44_17885 PF00005 ABC transporter H9K44_17885 PF00664 ABC transporter transmembrane region H9K44_17895 PF06719 AraC-type transcriptional regulator N-terminus H9K44_17895 PF12833 Helix-turn-helix domain H9K44_17910 PF10688 Bacterial inner membrane protein H9K44_17915 PF01081 KDPG and KHG aldolase H9K44_17920 PF00294 pfkB family carbohydrate kinase H9K44_17925 PF02614 Glucuronate isomerase H9K44_17930 PF08125 Mannitol dehydrogenase C-terminal domain H9K44_17930 PF01232 Mannitol dehydrogenase Rossmann domain H9K44_17935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K44_17940 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K44_17945 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K44_17950 PF00392 Bacterial regulatory proteins, gntR family H9K44_17950 PF07729 FCD domain H9K44_17955 PF03786 D-mannonate dehydratase (UxuA) H9K44_17960 PF00271 Helicase conserved C-terminal domain H9K44_17960 PF00270 DEAD/DEAH box helicase H9K44_17965 PF03475 3-alpha domain H9K44_17965 PF03473 MOSC domain H9K44_17980 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K44_17980 PF02056 Family 4 glycosyl hydrolase H9K44_17985 PF03466 LysR substrate binding domain H9K44_17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_17990 PF00672 HAMP domain H9K44_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_17990 PF02743 Cache domain H9K44_18000 PF08281 Sigma-70, region 4 H9K44_18000 PF04542 Sigma-70 region 2 H9K44_18005 PF01965 DJ-1/PfpI family H9K44_18005 PF12833 Helix-turn-helix domain H9K44_18010 PF03466 LysR substrate binding domain H9K44_18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18025 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_18025 PF13192 Thioredoxin domain H9K44_18030 PF00578 AhpC/TSA family H9K44_18030 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K44_18035 PF01047 MarR family H9K44_18040 PF02566 OsmC-like protein H9K44_18055 PF12833 Helix-turn-helix domain H9K44_18055 PF02311 AraC-like ligand binding domain H9K44_18065 PF11762 L-arabinose isomerase C-terminal domain H9K44_18065 PF02610 L-arabinose isomerase H9K44_18070 PF00596 Class II Aldolase and Adducin N-terminal domain H9K44_18075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K44_18075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K44_18080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K44_18085 PF00005 ABC transporter H9K44_18090 PF02653 Branched-chain amino acid transport system / permease component H9K44_18095 PF01136 Peptidase family U32 H9K44_18105 PF02378 Phosphotransferase system, EIIC H9K44_18105 PF00367 phosphotransferase system, EIIB H9K44_18110 PF00486 Transcriptional regulatory protein, C terminal H9K44_18110 PF00072 Response regulator receiver domain H9K44_18115 PF08521 Two-component sensor kinase N-terminal H9K44_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_18115 PF00512 His Kinase A (phospho-acceptor) domain H9K44_18120 PF01547 Bacterial extracellular solute-binding protein H9K44_18125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K44_18125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K44_18130 PF06276 Ferric iron reductase FhuF-like transporter H9K44_18130 PF04183 IucA / IucC family H9K44_18140 PF06276 Ferric iron reductase FhuF-like transporter H9K44_18140 PF04183 IucA / IucC family H9K44_18145 PF02655 ATP-grasp domain H9K44_18145 PF00206 Lyase H9K44_18150 PF07715 TonB-dependent Receptor Plug Domain H9K44_18150 PF00593 TonB dependent receptor H9K44_18155 PF00593 TonB dependent receptor H9K44_18155 PF07660 Secretin and TonB N terminus short domain H9K44_18155 PF07715 TonB-dependent Receptor Plug Domain H9K44_18160 PF01497 Periplasmic binding protein H9K44_18165 PF01032 FecCD transport family H9K44_18170 PF01032 FecCD transport family H9K44_18175 PF00005 ABC transporter H9K44_18180 PF17200 Single Cache domain 2 H9K44_18180 PF00672 HAMP domain H9K44_18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_18185 PF05193 Peptidase M16 inactive domain H9K44_18185 PF00675 Insulinase (Peptidase family M16) H9K44_18195 PF04225 Opacity-associated protein A LysM-like domain H9K44_18195 PF01551 Peptidase family M23 H9K44_18205 PF07690 Major Facilitator Superfamily H9K44_18215 PF00128 Alpha amylase, catalytic domain H9K44_18215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K44_18220 PF02264 LamB porin H9K44_18235 PF02903 Alpha amylase, N-terminal ig-like domain H9K44_18235 PF16657 Maltogenic Amylase, C-terminal domain H9K44_18235 PF00128 Alpha amylase, catalytic domain H9K44_18240 PF04231 Endonuclease I H9K44_18245 PF11852 Domain of unknown function (DUF3372) H9K44_18245 PF03714 Bacterial pullanase-associated domain H9K44_18245 PF17967 Pullulanase N2 domain H9K44_18245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K44_18245 PF18494 Pullulanase Ins domain H9K44_18260 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K44_18260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K44_18260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K44_18265 PF13520 Amino acid permease H9K44_18275 PF08543 Phosphomethylpyrimidine kinase H9K44_18285 PF00375 Sodium:dicarboxylate symporter family H9K44_18290 PF03193 RsgA GTPase H9K44_18295 PF00367 phosphotransferase system, EIIB H9K44_18295 PF02378 Phosphotransferase system, EIIC H9K44_18305 PF02630 SCO1/SenC H9K44_18320 PF17874 MalT-like TPR region H9K44_18320 PF00196 Bacterial regulatory proteins, luxR family H9K44_18325 PF00343 Carbohydrate phosphorylase H9K44_18330 PF02446 4-alpha-glucanotransferase H9K44_18335 PF00128 Alpha amylase, catalytic domain H9K44_18335 PF02806 Alpha amylase, C-terminal all-beta domain H9K44_18335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K44_18340 PF00912 Transglycosylase H9K44_18345 PF00128 Alpha amylase, catalytic domain H9K44_18355 PF07670 Nucleoside recognition H9K44_18360 PF07670 Nucleoside recognition H9K44_18365 PF01546 Peptidase family M20/M25/M40 H9K44_18365 PF07687 Peptidase dimerisation domain H9K44_18370 PF06803 Protein of unknown function (DUF1232) H9K44_18375 PF00375 Sodium:dicarboxylate symporter family H9K44_18385 PF03466 LysR substrate binding domain H9K44_18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18390 PF08803 Putative mono-oxygenase ydhR H9K44_18400 PF13614 AAA domain H9K44_18400 PF02706 Chain length determinant protein H9K44_18400 PF13807 G-rich domain on putative tyrosine kinase H9K44_18405 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K44_18410 PF10531 SLBB domain H9K44_18410 PF02563 Polysaccharide biosynthesis/export protein H9K44_18410 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H9K44_18420 PF00881 Nitroreductase family H9K44_18425 PF01914 MarC family integral membrane protein H9K44_18430 PF01734 Patatin-like phospholipase H9K44_18435 PF18416 N-acetylglucosamine binding protein domain 2 H9K44_18435 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K44_18440 PF00581 Rhodanese-like domain H9K44_18440 PF17773 UPF0176 acylphosphatase like domain H9K44_18450 PF00561 alpha/beta hydrolase fold H9K44_18455 PF07943 Penicillin-binding protein 5, C-terminal domain H9K44_18455 PF00768 D-alanyl-D-alanine carboxypeptidase H9K44_18460 PF00686 Starch binding domain H9K44_18460 PF00128 Alpha amylase, catalytic domain H9K44_18465 PF12833 Helix-turn-helix domain H9K44_18465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9K44_18470 PF00881 Nitroreductase family H9K44_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18480 PF03466 LysR substrate binding domain H9K44_18485 PF09905 DNA-binding protein VF530 H9K44_18495 PF00175 Oxidoreductase NAD-binding domain H9K44_18495 PF00970 Oxidoreductase FAD-binding domain H9K44_18505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K44_18510 PF01594 AI-2E family transporter H9K44_18520 PF13533 Biotin-lipoyl like H9K44_18540 PF00892 EamA-like transporter family H9K44_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18545 PF03466 LysR substrate binding domain H9K44_18550 PF07690 Major Facilitator Superfamily H9K44_18560 PF00583 Acetyltransferase (GNAT) family H9K44_18570 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K44_18575 PF04055 Radical SAM superfamily H9K44_18580 PF02901 Pyruvate formate lyase-like H9K44_18580 PF01228 Glycine radical H9K44_18600 PF08000 Bacterial PH domain H9K44_18610 PF00691 OmpA family H9K44_18610 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K44_18615 PF01618 MotA/TolQ/ExbB proton channel family H9K44_18620 PF04542 Sigma-70 region 2 H9K44_18620 PF04545 Sigma-70, region 4 H9K44_18625 PF03748 Flagellar basal body-associated protein FliL H9K44_18640 PF02561 Flagellar protein FliS H9K44_18645 PF07196 Flagellin hook IN motif H9K44_18645 PF07195 Flagellar hook-associated protein 2 C-terminus H9K44_18645 PF02465 Flagellar hook-associated protein 2 N-terminus H9K44_18650 PF00700 Bacterial flagellin C-terminal helical region H9K44_18650 PF00669 Bacterial flagellin N-terminal helical region H9K44_18660 PF00771 FHIPEP family H9K44_18665 PF01312 FlhB HrpN YscU SpaS Family H9K44_18670 PF01311 Bacterial export proteins, family 1 H9K44_18675 PF01313 Bacterial export proteins, family 3 H9K44_18680 PF00813 FliP family H9K44_18685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K44_18700 PF00072 Response regulator receiver domain H9K44_18700 PF00158 Sigma-54 interaction domain H9K44_18700 PF02954 Bacterial regulatory protein, Fis family H9K44_18705 PF02049 Flagellar hook-basal body complex protein FliE H9K44_18710 PF01514 Secretory protein of YscJ/FliF family H9K44_18710 PF08345 Flagellar M-ring protein C-terminal H9K44_18715 PF01706 FliG C-terminal domain H9K44_18715 PF14841 FliG middle domain H9K44_18715 PF14842 FliG N-terminal domain H9K44_18725 PF18269 T3SS EscN ATPase C-terminal domain H9K44_18725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K44_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18740 PF03466 LysR substrate binding domain H9K44_18775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_18780 PF03466 LysR substrate binding domain H9K44_18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18800 PF00072 Response regulator receiver domain H9K44_18800 PF00486 Transcriptional regulatory protein, C terminal H9K44_18805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_18805 PF00512 His Kinase A (phospho-acceptor) domain H9K44_18805 PF08448 PAS fold H9K44_18805 PF13426 PAS domain H9K44_18805 PF00072 Response regulator receiver domain H9K44_18810 PF00080 Copper/zinc superoxide dismutase (SODC) H9K44_18815 PF00266 Aminotransferase class-V H9K44_18820 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_18825 PF00990 Diguanylate cyclase, GGDEF domain H9K44_18825 PF00563 EAL domain H9K44_18825 PF03707 Bacterial signalling protein N terminal repeat H9K44_18830 PF00155 Aminotransferase class I and II H9K44_18835 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_18835 PF00107 Zinc-binding dehydrogenase H9K44_18865 PF00194 Eukaryotic-type carbonic anhydrase H9K44_18870 PF00924 Mechanosensitive ion channel H9K44_18880 PF01070 FMN-dependent dehydrogenase H9K44_18885 PF02652 L-lactate permease H9K44_18890 PF03466 LysR substrate binding domain H9K44_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_18895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K44_18895 PF00326 Prolyl oligopeptidase family H9K44_18900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K44_18900 PF00005 ABC transporter H9K44_18910 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K44_18910 PF13654 AAA domain H9K44_18915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_18915 PF00672 HAMP domain H9K44_18920 PF07238 PilZ domain H9K44_18920 PF12945 Flagellar protein YcgR H9K44_18935 PF00583 Acetyltransferase (GNAT) family H9K44_18940 PF12800 4Fe-4S binding domain H9K44_18940 PF12838 4Fe-4S dicluster domain H9K44_18945 PF13237 4Fe-4S dicluster domain H9K44_18945 PF12801 4Fe-4S binding domain H9K44_18960 PF00005 ABC transporter H9K44_18960 PF12558 ATP-binding cassette cobalt transporter H9K44_18965 PF07155 ECF-type riboflavin transporter, S component H9K44_18970 PF00529 HlyD membrane-fusion protein of T1SS H9K44_18970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_18975 PF11742 Protein of unknown function (DUF3302) H9K44_18980 PF00990 Diguanylate cyclase, GGDEF domain H9K44_18995 PF01048 Phosphorylase superfamily H9K44_19000 PF08349 Protein of unknown function (DUF1722) H9K44_19005 PF13411 MerR HTH family regulatory protein H9K44_19010 PF00875 DNA photolyase H9K44_19010 PF03441 FAD binding domain of DNA photolyase H9K44_19015 PF17969 L,D-transpeptidase C-terminal domain H9K44_19015 PF01476 LysM domain H9K44_19015 PF03734 L,D-transpeptidase catalytic domain H9K44_19025 PF00270 DEAD/DEAH box helicase H9K44_19025 PF00271 Helicase conserved C-terminal domain H9K44_19030 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K44_19030 PF00326 Prolyl oligopeptidase family H9K44_19035 PF07715 TonB-dependent Receptor Plug Domain H9K44_19035 PF00593 TonB dependent receptor H9K44_19055 PF00672 HAMP domain H9K44_19055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_19060 PF12849 PBP superfamily domain H9K44_19065 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_19070 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_19075 PF00005 ABC transporter H9K44_19090 PF07584 Aerotolerance regulator N-terminal H9K44_19090 PF13519 von Willebrand factor type A domain H9K44_19095 PF13519 von Willebrand factor type A domain H9K44_19105 PF01882 Protein of unknown function DUF58 H9K44_19110 PF07726 ATPase family associated with various cellular activities (AAA) H9K44_19110 PF17863 AAA lid domain H9K44_19115 PF00672 HAMP domain H9K44_19115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_19115 PF02743 Cache domain H9K44_19125 PF00196 Bacterial regulatory proteins, luxR family H9K44_19130 PF00196 Bacterial regulatory proteins, luxR family H9K44_19140 PF00005 ABC transporter H9K44_19140 PF00664 ABC transporter transmembrane region H9K44_19145 PF00529 HlyD membrane-fusion protein of T1SS H9K44_19160 PF00691 OmpA family H9K44_19170 PF01032 FecCD transport family H9K44_19175 PF01497 Periplasmic binding protein H9K44_19180 PF00005 ABC transporter H9K44_19185 PF00593 TonB dependent receptor H9K44_19185 PF07715 TonB-dependent Receptor Plug Domain H9K44_19190 PF00664 ABC transporter transmembrane region H9K44_19190 PF00005 ABC transporter H9K44_19195 PF13493 Domain of unknown function (DUF4118) H9K44_19195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_19195 PF00512 His Kinase A (phospho-acceptor) domain H9K44_19195 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K44_19195 PF13493 Domain of unknown function (DUF4118) H9K44_19195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_19195 PF00512 His Kinase A (phospho-acceptor) domain H9K44_19195 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K44_19200 PF00072 Response regulator receiver domain H9K44_19200 PF00486 Transcriptional regulatory protein, C terminal H9K44_19205 PF02080 TrkA-C domain H9K44_19205 PF02254 TrkA-N domain H9K44_19210 PF02386 Cation transport protein H9K44_19215 PF00563 EAL domain H9K44_19215 PF00990 Diguanylate cyclase, GGDEF domain H9K44_19215 PF03707 Bacterial signalling protein N terminal repeat H9K44_19220 PF00127 Copper binding proteins, plastocyanin/azurin family H9K44_19225 PF13419 Haloacid dehalogenase-like hydrolase H9K44_19235 PF01238 Phosphomannose isomerase type I H9K44_19240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_19240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_19245 PF12833 Helix-turn-helix domain H9K44_19255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_19265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K44_19265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K44_19270 PF00199 Catalase H9K44_19270 PF06628 Catalase-related immune-responsive H9K44_19275 PF13417 Glutathione S-transferase, N-terminal domain H9K44_19280 PF16884 N-terminal domain of oxidoreductase H9K44_19280 PF00107 Zinc-binding dehydrogenase H9K44_19285 PF16925 Tetracyclin repressor-like, C-terminal domain H9K44_19285 PF00440 Bacterial regulatory proteins, tetR family H9K44_19290 PF04266 ASCH domain H9K44_19320 PF13439 Glycosyltransferase Family 4 H9K44_19320 PF00534 Glycosyl transferases group 1 H9K44_19330 PF02706 Chain length determinant protein H9K44_19330 PF13614 AAA domain H9K44_19330 PF13807 G-rich domain on putative tyrosine kinase H9K44_19345 PF02397 Bacterial sugar transferase H9K44_19350 PF08402 TOBE domain H9K44_19350 PF00005 ABC transporter H9K44_19355 PF01547 Bacterial extracellular solute-binding protein H9K44_19360 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_19360 PF14785 Maltose transport system permease protein MalF P2 domain H9K44_19365 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_19395 PF05661 Protein of unknown function (DUF808) H9K44_19400 PF01979 Amidohydrolase family H9K44_19405 PF01679 Proteolipid membrane potential modulator H9K44_19410 PF03476 MOSC N-terminal beta barrel domain H9K44_19410 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_19410 PF03473 MOSC domain H9K44_19410 PF03473 MOSC domain H9K44_19410 PF03476 MOSC N-terminal beta barrel domain H9K44_19410 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K44_19415 PF02540 NAD synthase H9K44_19420 PF01467 Cytidylyltransferase-like H9K44_19460 PF00005 ABC transporter H9K44_19465 PF01032 FecCD transport family H9K44_19475 PF02472 Biopolymer transport protein ExbD/TolR H9K44_19480 PF01618 MotA/TolQ/ExbB proton channel family H9K44_19485 PF03544 Gram-negative bacterial TonB protein C-terminal H9K44_19490 PF04055 Radical SAM superfamily H9K44_19495 PF06228 Haem utilisation ChuX/HutX H9K44_19500 PF01243 Pyridoxamine 5'-phosphate oxidase H9K44_19510 PF01584 CheW-like domain H9K44_19510 PF00072 Response regulator receiver domain H9K44_19525 PF13087 AAA domain H9K44_19525 PF13091 PLD-like domain H9K44_19550 PF00141 Peroxidase H9K44_19555 PF00210 Ferritin-like domain H9K44_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_19560 PF03466 LysR substrate binding domain H9K44_19575 PF08453 Peptidase family M9 N-terminal H9K44_19575 PF04151 Bacterial pre-peptidase C-terminal domain H9K44_19575 PF01752 Collagenase H9K44_19585 PF00128 Alpha amylase, catalytic domain H9K44_19600 PF02254 TrkA-N domain H9K44_19600 PF00999 Sodium/hydrogen exchanger family H9K44_19605 PF02525 Flavodoxin-like fold H9K44_19610 PF00582 Universal stress protein family H9K44_19615 PF00005 ABC transporter H9K44_19615 PF16326 ABC transporter C-terminal domain H9K44_19615 PF12848 ABC transporter H9K44_19620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K44_19620 PF00326 Prolyl oligopeptidase family H9K44_19630 PF13533 Biotin-lipoyl like H9K44_19635 PF00873 AcrB/AcrD/AcrF family H9K44_19640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K44_19650 PF13302 Acetyltransferase (GNAT) domain H9K44_19660 PF00990 Diguanylate cyclase, GGDEF domain H9K44_19680 PF00873 AcrB/AcrD/AcrF family H9K44_19700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_19700 PF00384 Molybdopterin oxidoreductase H9K44_19700 PF01568 Molydopterin dinucleotide binding domain H9K44_19700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H9K44_19700 PF12838 4Fe-4S dicluster domain H9K44_19720 PF00005 ABC transporter H9K44_19730 PF00672 HAMP domain H9K44_19730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_19735 PF10282 Lactonase, 7-bladed beta-propeller H9K44_19740 PF02567 Phenazine biosynthesis-like protein H9K44_19745 PF01161 Phosphatidylethanolamine-binding protein H9K44_19755 PF01758 Sodium Bile acid symporter family H9K44_19770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_19775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_19775 PF02378 Phosphotransferase system, EIIC H9K44_19780 PF08240 Alcohol dehydrogenase GroES-like domain H9K44_19780 PF00107 Zinc-binding dehydrogenase H9K44_19815 PF03222 Tryptophan/tyrosine permease family H9K44_19825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_19825 PF02743 Cache domain H9K44_19825 PF00672 HAMP domain H9K44_19830 PF07670 Nucleoside recognition H9K44_19850 PF01476 LysM domain H9K44_19850 PF08525 Opacity-associated protein A N-terminal motif H9K44_19850 PF01551 Peptidase family M23 H9K44_19855 PF00563 EAL domain H9K44_19855 PF08448 PAS fold H9K44_19855 PF08447 PAS fold H9K44_19855 PF00990 Diguanylate cyclase, GGDEF domain H9K44_19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_19860 PF03466 LysR substrate binding domain H9K44_19865 PF07690 Major Facilitator Superfamily H9K44_19875 PF00462 Glutaredoxin H9K44_19880 PF00892 EamA-like transporter family H9K44_19885 PF00267 Gram-negative porin H9K44_19895 PF01557 Fumarylacetoacetate (FAA) hydrolase family H9K44_19910 PF12833 Helix-turn-helix domain H9K44_19915 PF01810 LysE type translocator H9K44_19925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K44_19925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K44_19925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K44_19925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K44_19930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K44_19930 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H9K44_19935 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K44_19940 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H9K44_19945 PF00510 Cytochrome c oxidase subunit III H9K44_19965 PF02628 Cytochrome oxidase assembly protein H9K44_19970 PF01040 UbiA prenyltransferase family H9K44_19975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K44_19975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K44_20005 PF00313 'Cold-shock' DNA-binding domain H9K44_20010 PF03889 Alternative ribosome-rescue factor A H9K44_20015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_20015 PF08447 PAS fold H9K44_20015 PF13426 PAS domain H9K44_20020 PF00990 Diguanylate cyclase, GGDEF domain H9K44_20035 PF12704 MacB-like periplasmic core domain H9K44_20035 PF02687 FtsX-like permease family H9K44_20035 PF00005 ABC transporter H9K44_20040 PF02687 FtsX-like permease family H9K44_20040 PF00005 ABC transporter H9K44_20040 PF12704 MacB-like periplasmic core domain H9K44_20050 PF00672 HAMP domain H9K44_20050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_20050 PF17200 Single Cache domain 2 H9K44_20055 PF00210 Ferritin-like domain H9K44_20065 PF07995 Glucose / Sorbosone dehydrogenase H9K44_20070 PF00465 Iron-containing alcohol dehydrogenase H9K44_20085 PF00892 EamA-like transporter family H9K44_20110 PF03466 LysR substrate binding domain H9K44_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_20120 PF00501 AMP-binding enzyme H9K44_20120 PF13193 AMP-binding enzyme C-terminal domain H9K44_20125 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H9K44_20130 PF01329 Pterin 4 alpha carbinolamine dehydratase H9K44_20150 PF12843 Putative quorum-sensing-regulated virulence factor H9K44_20155 PF00271 Helicase conserved C-terminal domain H9K44_20155 PF00270 DEAD/DEAH box helicase H9K44_20160 PF09905 DNA-binding protein VF530 H9K44_20165 PF00291 Pyridoxal-phosphate dependent enzyme H9K44_20175 PF01470 Pyroglutamyl peptidase H9K44_20185 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9K44_20185 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9K44_20190 PF00270 DEAD/DEAH box helicase H9K44_20190 PF00271 Helicase conserved C-terminal domain H9K44_20210 PF00563 EAL domain H9K44_20210 PF12792 CSS motif domain associated with EAL H9K44_20215 PF00005 ABC transporter H9K44_20220 PF12729 Four helix bundle sensory module for signal transduction H9K44_20220 PF00672 HAMP domain H9K44_20220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_20260 PF00251 Glycosyl hydrolases family 32 N-terminal domain H9K44_20260 PF08244 Glycosyl hydrolases family 32 C terminal H9K44_20265 PF00294 pfkB family carbohydrate kinase H9K44_20270 PF02378 Phosphotransferase system, EIIC H9K44_20270 PF00367 phosphotransferase system, EIIB H9K44_20275 PF00356 Bacterial regulatory proteins, lacI family H9K44_20280 PF02264 LamB porin H9K44_20280 PF11471 Maltoporin periplasmic N-terminal extension H9K44_20325 PF01575 MaoC like domain H9K44_20330 PF12849 PBP superfamily domain H9K44_20340 PF12833 Helix-turn-helix domain H9K44_20345 PF08206 Ribonuclease B OB domain H9K44_20345 PF00575 S1 RNA binding domain H9K44_20345 PF00773 RNB domain H9K44_20350 PF00270 DEAD/DEAH box helicase H9K44_20350 PF03880 DbpA RNA binding domain H9K44_20350 PF00271 Helicase conserved C-terminal domain H9K44_20360 PF00871 Acetokinase family H9K44_20365 PF08447 PAS fold H9K44_20365 PF13426 PAS domain H9K44_20365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_20375 PF10063 Uncharacterized integral membrane protein (DUF2301) H9K44_20380 PF00682 HMGL-like H9K44_20385 PF00378 Enoyl-CoA hydratase/isomerase H9K44_20390 PF01039 Carboxyl transferase domain H9K44_20395 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_20395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_20395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_20400 PF00376 MerR family regulatory protein H9K44_20400 PF09278 MerR, DNA binding H9K44_20405 PF02803 Thiolase, C-terminal domain H9K44_20405 PF00108 Thiolase, N-terminal domain H9K44_20410 PF00171 Aldehyde dehydrogenase family H9K44_20415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_20415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_20415 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_20420 PF00378 Enoyl-CoA hydratase/isomerase H9K44_20425 PF00378 Enoyl-CoA hydratase/isomerase H9K44_20430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K44_20430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K44_20440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K44_20440 PF06481 COX Aromatic Rich Motif H9K44_20445 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K44_20450 PF00510 Cytochrome c oxidase subunit III H9K44_20460 PF01040 UbiA prenyltransferase family H9K44_20465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K44_20470 PF08031 Berberine and berberine like H9K44_20470 PF01565 FAD binding domain H9K44_20475 PF03466 LysR substrate binding domain H9K44_20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_20490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_20490 PF03466 LysR substrate binding domain H9K44_20495 PF00005 ABC transporter H9K44_20500 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_20505 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_20510 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_20520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_20520 PF03466 LysR substrate binding domain H9K44_20525 PF00043 Glutathione S-transferase, C-terminal domain H9K44_20525 PF02798 Glutathione S-transferase, N-terminal domain H9K44_20535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K44_20535 PF00364 Biotin-requiring enzyme H9K44_20535 PF02817 e3 binding domain H9K44_20540 PF02779 Transketolase, pyrimidine binding domain H9K44_20540 PF02780 Transketolase, C-terminal domain H9K44_20545 PF00676 Dehydrogenase E1 component H9K44_20560 PF00012 Hsp70 protein H9K44_20565 PF04314 Copper chaperone PCu(A)C H9K44_20590 PF00486 Transcriptional regulatory protein, C terminal H9K44_20590 PF00072 Response regulator receiver domain H9K44_20605 PF00245 Alkaline phosphatase H9K44_20615 PF00082 Subtilase family H9K44_20615 PF01483 Proprotein convertase P-domain H9K44_20625 PF00072 Response regulator receiver domain H9K44_20625 PF00990 Diguanylate cyclase, GGDEF domain H9K44_20630 PF03222 Tryptophan/tyrosine permease family H9K44_20635 PF00583 Acetyltransferase (GNAT) family H9K44_20640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_20640 PF01568 Molydopterin dinucleotide binding domain H9K44_20640 PF00384 Molybdopterin oxidoreductase H9K44_20645 PF10414 Sirohaem synthase dimerisation region H9K44_20645 PF14824 Sirohaem biosynthesis protein central H9K44_20645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K44_20650 PF02885 Glycosyl transferase family, helical bundle domain H9K44_20650 PF00591 Glycosyl transferase family, a/b domain H9K44_20655 PF01738 Dienelactone hydrolase family H9K44_20660 PF03861 ANTAR domain H9K44_20660 PF08376 Nitrate and nitrite sensing H9K44_20670 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_20675 PF00005 ABC transporter H9K44_20680 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9K44_20680 PF13806 Rieske-like [2Fe-2S] domain H9K44_20680 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_20680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K44_20680 PF04324 BFD-like [2Fe-2S] binding domain H9K44_20680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K44_20695 PF08361 MAATS-type transcriptional repressor, C-terminal region H9K44_20695 PF00440 Bacterial regulatory proteins, tetR family H9K44_20710 PF00211 Adenylate and Guanylate cyclase catalytic domain H9K44_20710 PF00072 Response regulator receiver domain H9K44_20730 PF03793 PASTA domain H9K44_20730 PF00069 Protein kinase domain H9K44_20745 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9K44_20750 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K44_20750 PF00691 OmpA family H9K44_20755 PF06761 Intracellular multiplication and human macrophage-killing H9K44_20755 PF06744 Type VI secretion protein IcmF C-terminal H9K44_20755 PF14331 ImcF-related N-terminal domain H9K44_20775 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H9K44_20780 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K44_20785 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K44_20800 PF05947 Type VI secretion system, TssF H9K44_20810 PF17871 AAA lid domain H9K44_20810 PF07724 AAA domain (Cdc48 subfamily) H9K44_20810 PF00004 ATPase family associated with various cellular activities (AAA) H9K44_20810 PF10431 C-terminal, D2-small domain, of ClpB protein H9K44_20820 PF06715 Gp5 C-terminal repeat (3 copies) H9K44_20820 PF04717 Type VI secretion system, phage-baseplate injector H9K44_20835 PF00149 Calcineurin-like phosphoesterase H9K44_20835 PF12320 Type 5 capsule protein repressor C-terminal domain H9K44_20840 PF13476 AAA domain H9K44_20860 PF08212 Lipocalin-like domain H9K44_20870 PF07690 Major Facilitator Superfamily H9K44_20880 PF03606 C4-dicarboxylate anaerobic carrier H9K44_20885 PF00034 Cytochrome c H9K44_20890 PF01212 Beta-eliminating lyase H9K44_20900 PF12592 Protein of unknown function (DUF3763) H9K44_20900 PF17868 AAA lid domain H9K44_20900 PF07728 AAA domain (dynein-related subfamily) H9K44_20905 PF05762 VWA domain containing CoxE-like protein H9K44_20920 PF03466 LysR substrate binding domain H9K44_20920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_20925 PF01565 FAD binding domain H9K44_20925 PF09330 D-lactate dehydrogenase, membrane binding H9K44_20940 PF01168 Alanine racemase, N-terminal domain H9K44_20940 PF00842 Alanine racemase, C-terminal domain H9K44_20945 PF00672 HAMP domain H9K44_20945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_20960 PF09154 Domain of unknown function (DUF1939) H9K44_20960 PF00128 Alpha amylase, catalytic domain H9K44_20995 PF00990 Diguanylate cyclase, GGDEF domain H9K44_20995 PF03707 Bacterial signalling protein N terminal repeat H9K44_20995 PF00563 EAL domain H9K44_21005 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21005 PF00563 EAL domain H9K44_21005 PF03707 Bacterial signalling protein N terminal repeat H9K44_21010 PF14760 Rnk N-terminus H9K44_21010 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K44_21015 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9K44_21015 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_21015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K44_21015 PF04324 BFD-like [2Fe-2S] binding domain H9K44_21015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K44_21020 PF13806 Rieske-like [2Fe-2S] domain H9K44_21025 PF01226 Formate/nitrite transporter H9K44_21030 PF14824 Sirohaem biosynthesis protein central H9K44_21030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K44_21030 PF10414 Sirohaem synthase dimerisation region H9K44_21045 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K44_21055 PF07715 TonB-dependent Receptor Plug Domain H9K44_21055 PF00593 TonB dependent receptor H9K44_21070 PF11756 Nitrous oxide-stimulated promoter H9K44_21075 PF01554 MatE H9K44_21080 PF07495 Y_Y_Y domain H9K44_21080 PF00072 Response regulator receiver domain H9K44_21080 PF07494 Two component regulator propeller H9K44_21080 PF00512 His Kinase A (phospho-acceptor) domain H9K44_21080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_21080 PF12833 Helix-turn-helix domain H9K44_21085 PF07690 Major Facilitator Superfamily H9K44_21090 PF00085 Thioredoxin H9K44_21095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K44_21095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K44_21115 PF01238 Phosphomannose isomerase type I H9K44_21120 PF07690 Major Facilitator Superfamily H9K44_21125 PF05231 MASE1 H9K44_21125 PF07730 Histidine kinase H9K44_21125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_21130 PF00072 Response regulator receiver domain H9K44_21130 PF00196 Bacterial regulatory proteins, luxR family H9K44_21135 PF07690 Major Facilitator Superfamily H9K44_21140 PF02634 FdhD/NarQ family H9K44_21145 PF03466 LysR substrate binding domain H9K44_21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_21150 PF00384 Molybdopterin oxidoreductase H9K44_21155 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K44_21155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K44_21170 PF04143 Sulphur transport H9K44_21180 PF00873 AcrB/AcrD/AcrF family H9K44_21185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_21195 PF03477 ATP cone domain H9K44_21195 PF13597 Anaerobic ribonucleoside-triphosphate reductase H9K44_21205 PF01554 MatE H9K44_21210 PF12833 Helix-turn-helix domain H9K44_21215 PF00155 Aminotransferase class I and II H9K44_21220 PF18030 RimK PreATP-grasp domain H9K44_21220 PF08443 RimK-like ATP-grasp domain H9K44_21230 PF04076 Bacterial OB fold (BOF) protein H9K44_21235 PF07685 CobB/CobQ-like glutamine amidotransferase domain H9K44_21245 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_21250 PF00005 ABC transporter H9K44_21250 PF03459 TOBE domain H9K44_21260 PF00360 Phytochrome region H9K44_21260 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21260 PF01590 GAF domain H9K44_21260 PF00563 EAL domain H9K44_21270 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K44_21285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K44_21285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H9K44_21290 PF02233 NAD(P) transhydrogenase beta subunit H9K44_21300 PF00486 Transcriptional regulatory protein, C terminal H9K44_21300 PF00072 Response regulator receiver domain H9K44_21315 PF03701 Uncharacterised protein family (UPF0181) H9K44_21320 PF00582 Universal stress protein family H9K44_21330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_21330 PF03466 LysR substrate binding domain H9K44_21345 PF01253 Translation initiation factor SUI1 H9K44_21355 PF01820 D-ala D-ala ligase N-terminus H9K44_21355 PF07478 D-ala D-ala ligase C-terminus H9K44_21365 PF13607 Succinyl-CoA ligase like flavodoxin domain H9K44_21365 PF13380 CoA binding domain H9K44_21365 PF00583 Acetyltransferase (GNAT) family H9K44_21370 PF03466 LysR substrate binding domain H9K44_21370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_21375 PF04886 PT repeat H9K44_21375 PF07715 TonB-dependent Receptor Plug Domain H9K44_21375 PF00593 TonB dependent receptor H9K44_21380 PF16363 GDP-mannose 4,6 dehydratase H9K44_21385 PF00563 EAL domain H9K44_21385 PF08447 PAS fold H9K44_21385 PF08448 PAS fold H9K44_21385 PF13426 PAS domain H9K44_21385 PF05231 MASE1 H9K44_21385 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21390 PF03746 LamB/YcsF family H9K44_21395 PF02682 Carboxyltransferase domain, subdomain C and D H9K44_21400 PF02626 Carboxyltransferase domain, subdomain A and B H9K44_21410 PF02899 Phage integrase, N-terminal SAM-like domain H9K44_21410 PF00589 Phage integrase family H9K44_21450 PF02498 BRO family, N-terminal domain H9K44_21450 PF10548 P22AR C-terminal domain H9K44_21510 PF00005 ABC transporter H9K44_21515 PF13472 GDSL-like Lipase/Acylhydrolase family H9K44_21520 PF07055 Enoyl reductase FAD binding domain H9K44_21520 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K44_21520 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K44_21525 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21525 PF13188 PAS domain H9K44_21525 PF00563 EAL domain H9K44_21525 PF03707 Bacterial signalling protein N terminal repeat H9K44_21535 PF00226 DnaJ domain H9K44_21535 PF01556 DnaJ C terminal domain H9K44_21535 PF00684 DnaJ central domain H9K44_21560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K44_21560 PF12793 Sugar transport-related sRNA regulator N-term H9K44_21570 PF03061 Thioesterase superfamily H9K44_21585 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K44_21590 PF12262 Bacterial virulence factor lipase N-terminal H9K44_21605 PF03741 Integral membrane protein TerC family H9K44_21610 PF02872 5'-nucleotidase, C-terminal domain H9K44_21610 PF00149 Calcineurin-like phosphoesterase H9K44_21615 PF11398 Protein of unknown function (DUF2813) H9K44_21620 PF06496 Protein of unknown function (DUF1097) H9K44_21625 PF03466 LysR substrate binding domain H9K44_21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_21630 PF01226 Formate/nitrite transporter H9K44_21635 PF04264 YceI-like domain H9K44_21640 PF01292 Prokaryotic cytochrome b561 H9K44_21655 PF00563 EAL domain H9K44_21655 PF12792 CSS motif domain associated with EAL H9K44_21660 PF00271 Helicase conserved C-terminal domain H9K44_21660 PF00270 DEAD/DEAH box helicase H9K44_21665 PF04336 Acyl carrier protein phosphodiesterase H9K44_21670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_21675 PF13419 Haloacid dehalogenase-like hydrolase H9K44_21680 PF11849 Domain of unknown function (DUF3369) H9K44_21695 PF00294 pfkB family carbohydrate kinase H9K44_21700 PF01268 Formate--tetrahydrofolate ligase H9K44_21705 PF00483 Nucleotidyl transferase H9K44_21710 PF06483 Chitinase C H9K44_21710 PF00704 Glycosyl hydrolases family 18 H9K44_21715 PF06719 AraC-type transcriptional regulator N-terminus H9K44_21715 PF12833 Helix-turn-helix domain H9K44_21720 PF00465 Iron-containing alcohol dehydrogenase H9K44_21730 PF02954 Bacterial regulatory protein, Fis family H9K44_21730 PF00072 Response regulator receiver domain H9K44_21730 PF14532 Sigma-54 interaction domain H9K44_21735 PF00672 HAMP domain H9K44_21735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_21735 PF00512 His Kinase A (phospho-acceptor) domain H9K44_21745 PF07690 Major Facilitator Superfamily H9K44_21750 PF00224 Pyruvate kinase, barrel domain H9K44_21750 PF02887 Pyruvate kinase, alpha/beta domain H9K44_21755 PF00005 ABC transporter H9K44_21760 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_21765 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K44_21770 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_21775 PF00990 Diguanylate cyclase, GGDEF domain H9K44_21775 PF00989 PAS fold H9K44_21775 PF01590 GAF domain H9K44_21775 PF00563 EAL domain H9K44_21790 PF00356 Bacterial regulatory proteins, lacI family H9K44_21790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K44_21795 PF00381 PTS HPr component phosphorylation site H9K44_21795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K44_21800 PF00294 pfkB family carbohydrate kinase H9K44_21805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K44_21805 PF02378 Phosphotransferase system, EIIC H9K44_21815 PF00873 AcrB/AcrD/AcrF family H9K44_21835 PF08669 Glycine cleavage T-protein C-terminal barrel domain H9K44_21835 PF01571 Aminomethyltransferase folate-binding domain H9K44_21845 PF00464 Serine hydroxymethyltransferase H9K44_21850 PF01597 Glycine cleavage H-protein H9K44_21855 PF02347 Glycine cleavage system P-protein H9K44_21885 PF01212 Beta-eliminating lyase H9K44_21890 PF01039 Carboxyl transferase domain H9K44_21890 PF17848 Acetyl-coA carboxylase zinc finger domain H9K44_21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_21895 PF03466 LysR substrate binding domain H9K44_21900 PF02811 PHP domain H9K44_21900 PF00929 Exonuclease H9K44_21900 PF14579 Helix-hairpin-helix motif H9K44_21900 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K44_21900 PF11490 DNA polymerase III polC-type N-terminus II H9K44_21900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K44_21905 PF00664 ABC transporter transmembrane region H9K44_21905 PF00005 ABC transporter H9K44_21925 PF02253 Phospholipase A1 H9K44_21935 PF00376 MerR family regulatory protein H9K44_21935 PF09278 MerR, DNA binding H9K44_21940 PF01327 Polypeptide deformylase H9K44_21980 PF00571 CBS domain H9K44_21980 PF03448 MgtE intracellular N domain H9K44_21980 PF01769 Divalent cation transporter H9K44_22000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K44_22005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K44_22015 PF01757 Acyltransferase family H9K44_22025 PF09722 Protein of unknown function (DUF2384) H9K44_22030 PF00141 Peroxidase H9K44_22035 PF13187 4Fe-4S dicluster domain H9K44_22035 PF01645 Conserved region in glutamate synthase H9K44_22045 PF00072 Response regulator receiver domain H9K44_22045 PF12431 Transcriptional regulator H9K44_22050 PF00989 PAS fold H9K44_22050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9K44_22050 PF17203 Single cache domain 3 H9K44_22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22055 PF00939 Sodium:sulfate symporter transmembrane region H9K44_22060 PF00171 Aldehyde dehydrogenase family H9K44_22080 PF00892 EamA-like transporter family H9K44_22085 PF00893 Small Multidrug Resistance protein H9K44_22090 PF04151 Bacterial pre-peptidase C-terminal domain H9K44_22090 PF02868 Thermolysin metallopeptidase, alpha-helical domain H9K44_22090 PF01447 Thermolysin metallopeptidase, catalytic domain H9K44_22090 PF07504 Fungalysin/Thermolysin Propeptide Motif H9K44_22090 PF03413 Peptidase propeptide and YPEB domain H9K44_22100 PF01569 PAP2 superfamily H9K44_22110 PF00892 EamA-like transporter family H9K44_22125 PF01584 CheW-like domain H9K44_22125 PF00072 Response regulator receiver domain H9K44_22145 PF00196 Bacterial regulatory proteins, luxR family H9K44_22145 PF00072 Response regulator receiver domain H9K44_22155 PF00990 Diguanylate cyclase, GGDEF domain H9K44_22160 PF00196 Bacterial regulatory proteins, luxR family H9K44_22160 PF00072 Response regulator receiver domain H9K44_22165 PF13188 PAS domain H9K44_22165 PF03707 Bacterial signalling protein N terminal repeat H9K44_22165 PF00990 Diguanylate cyclase, GGDEF domain H9K44_22165 PF00563 EAL domain H9K44_22170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22170 PF00512 His Kinase A (phospho-acceptor) domain H9K44_22170 PF09456 RcsC Alpha-Beta-Loop (ABL) H9K44_22170 PF00072 Response regulator receiver domain H9K44_22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_22180 PF03466 LysR substrate binding domain H9K44_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_22185 PF03466 LysR substrate binding domain H9K44_22195 PF05736 OprF membrane domain H9K44_22195 PF00691 OmpA family H9K44_22230 PF00437 Type II/IV secretion system protein H9K44_22245 PF00263 Bacterial type II and III secretion system protein H9K44_22245 PF04972 BON domain H9K44_22245 PF13629 Pilus formation protein N terminal region H9K44_22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_22265 PF03466 LysR substrate binding domain H9K44_22270 PF12833 Helix-turn-helix domain H9K44_22280 PF04151 Bacterial pre-peptidase C-terminal domain H9K44_22280 PF01752 Collagenase H9K44_22280 PF08453 Peptidase family M9 N-terminal H9K44_22290 PF01926 50S ribosome-binding GTPase H9K44_22295 PF00155 Aminotransferase class I and II H9K44_22300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22300 PF00072 Response regulator receiver domain H9K44_22310 PF00814 Glycoprotease family H9K44_22310 PF00583 Acetyltransferase (GNAT) family H9K44_22320 PF03606 C4-dicarboxylate anaerobic carrier H9K44_22325 PF04011 LemA family H9K44_22330 PF01435 Peptidase family M48 H9K44_22345 PF08774 VRR-NUC domain H9K44_22345 PF18081 Fanconi anemia-associated nuclease SAP domain H9K44_22355 PF13186 Iron-sulfur cluster-binding domain H9K44_22355 PF04055 Radical SAM superfamily H9K44_22370 PF04076 Bacterial OB fold (BOF) protein H9K44_22375 PF00781 Diacylglycerol kinase catalytic domain H9K44_22380 PF03466 LysR substrate binding domain H9K44_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_22385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K44_22400 PF00092 von Willebrand factor type A domain H9K44_22415 PF17863 AAA lid domain H9K44_22415 PF07726 ATPase family associated with various cellular activities (AAA) H9K44_22420 PF04055 Radical SAM superfamily H9K44_22420 PF13186 Iron-sulfur cluster-binding domain H9K44_22425 PF00884 Sulfatase H9K44_22430 PF03466 LysR substrate binding domain H9K44_22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_22440 PF00884 Sulfatase H9K44_22445 PF16385 Domain of unknown function H9K44_22445 PF00884 Sulfatase H9K44_22450 PF00486 Transcriptional regulatory protein, C terminal H9K44_22450 PF00072 Response regulator receiver domain H9K44_22465 PF00072 Response regulator receiver domain H9K44_22465 PF01627 Hpt domain H9K44_22465 PF00512 His Kinase A (phospho-acceptor) domain H9K44_22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22465 PF00672 HAMP domain H9K44_22470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K44_22475 PF02142 MGS-like domain H9K44_22480 PF13361 UvrD-like helicase C-terminal domain H9K44_22480 PF12462 DNA helicase IV / RNA helicase N terminal H9K44_22480 PF00580 UvrD/REP helicase N-terminal domain H9K44_22485 PF12805 FUSC-like inner membrane protein yccS H9K44_22515 PF00593 TonB dependent receptor H9K44_22515 PF07715 TonB-dependent Receptor Plug Domain H9K44_22520 PF12833 Helix-turn-helix domain H9K44_22525 PF13411 MerR HTH family regulatory protein H9K44_22530 PF00005 ABC transporter H9K44_22535 PF01032 FecCD transport family H9K44_22540 PF01032 FecCD transport family H9K44_22545 PF01497 Periplasmic binding protein H9K44_22555 PF01048 Phosphorylase superfamily H9K44_22560 PF04973 Nicotinamide mononucleotide transporter H9K44_22570 PF00356 Bacterial regulatory proteins, lacI family H9K44_22575 PF00294 pfkB family carbohydrate kinase H9K44_22580 PF13407 Periplasmic binding protein domain H9K44_22585 PF02653 Branched-chain amino acid transport system / permease component H9K44_22590 PF00005 ABC transporter H9K44_22595 PF05025 RbsD / FucU transport protein family H9K44_22600 PF00563 EAL domain H9K44_22600 PF00990 Diguanylate cyclase, GGDEF domain H9K44_22605 PF01048 Phosphorylase superfamily H9K44_22645 PF04116 Fatty acid hydroxylase superfamily H9K44_22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22660 PF00072 Response regulator receiver domain H9K44_22660 PF09308 LuxQ, periplasmic H9K44_22660 PF00512 His Kinase A (phospho-acceptor) domain H9K44_22665 PF03150 Di-haem cytochrome c peroxidase H9K44_22665 PF00034 Cytochrome c H9K44_22670 PF03707 Bacterial signalling protein N terminal repeat H9K44_22670 PF13188 PAS domain H9K44_22670 PF00563 EAL domain H9K44_22670 PF00990 Diguanylate cyclase, GGDEF domain H9K44_22680 PF16200 C-terminal region of band_7 H9K44_22680 PF01145 SPFH domain / Band 7 family H9K44_22690 PF00881 Nitroreductase family H9K44_22695 PF00005 ABC transporter H9K44_22695 PF00571 CBS domain H9K44_22700 PF00528 Binding-protein-dependent transport system inner membrane component H9K44_22705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9K44_22710 PF05199 GMC oxidoreductase H9K44_22710 PF00732 GMC oxidoreductase H9K44_22715 PF00171 Aldehyde dehydrogenase family H9K44_22720 PF13977 BetI-type transcriptional repressor, C-terminal H9K44_22720 PF00440 Bacterial regulatory proteins, tetR family H9K44_22725 PF17151 Periplasmic sensor domain H9K44_22725 PF00990 Diguanylate cyclase, GGDEF domain H9K44_22735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K44_22735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K44_22745 PF00378 Enoyl-CoA hydratase/isomerase H9K44_22750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_22750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_22750 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_22755 PF00171 Aldehyde dehydrogenase family H9K44_22760 PF00108 Thiolase, N-terminal domain H9K44_22760 PF02803 Thiolase, C-terminal domain H9K44_22765 PF09278 MerR, DNA binding H9K44_22765 PF00376 MerR family regulatory protein H9K44_22770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K44_22770 PF02770 Acyl-CoA dehydrogenase, middle domain H9K44_22770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K44_22775 PF01039 Carboxyl transferase domain H9K44_22780 PF00378 Enoyl-CoA hydratase/isomerase H9K44_22785 PF00364 Biotin-requiring enzyme H9K44_22785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K44_22785 PF00289 Biotin carboxylase, N-terminal domain H9K44_22785 PF02785 Biotin carboxylase C-terminal domain H9K44_22785 PF18140 Propionyl-coenzyme A carboxylase BT domain H9K44_22790 PF00682 HMGL-like H9K44_22795 PF00072 Response regulator receiver domain H9K44_22795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K44_22795 PF01627 Hpt domain H9K44_22795 PF00512 His Kinase A (phospho-acceptor) domain H9K44_22795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_22795 PF00672 HAMP domain H9K44_22810 PF00924 Mechanosensitive ion channel H9K44_22810 PF12795 Mechanosensitive ion channel porin domain H9K44_22810 PF12794 Mechanosensitive ion channel inner membrane domain 1 H9K44_22815 PF14602 Hexapeptide repeat of succinyl-transferase H9K44_22815 PF12464 Maltose acetyltransferase H9K44_22820 PF00155 Aminotransferase class I and II H9K44_22820 PF00392 Bacterial regulatory proteins, gntR family H9K44_22825 PF01654 Cytochrome bd terminal oxidase subunit I H9K44_22830 PF02322 Cytochrome bd terminal oxidase subunit II H9K44_22840 PF02567 Phenazine biosynthesis-like protein H9K44_22845 PF02627 Carboxymuconolactone decarboxylase family H9K44_22850 PF13411 MerR HTH family regulatory protein H9K44_22860 PF00034 Cytochrome c H9K44_22870 PF05724 Thiopurine S-methyltransferase (TPMT) H9K44_22875 PF00501 AMP-binding enzyme H9K44_22875 PF14535 AMP-binding enzyme C-terminal domain H9K44_22880 PF00005 ABC transporter H9K44_22905 PF00005 ABC transporter H9K44_22905 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K44_22915 PF01012 Electron transfer flavoprotein domain H9K44_22920 PF01012 Electron transfer flavoprotein domain H9K44_22920 PF00766 Electron transfer flavoprotein FAD-binding domain H9K44_22925 PF13193 AMP-binding enzyme C-terminal domain H9K44_22925 PF00501 AMP-binding enzyme H9K44_22930 PF00478 IMP dehydrogenase / GMP reductase domain H9K44_22935 PF01256 Carbohydrate kinase H9K44_22935 PF03853 YjeF-related protein N-terminus H9K44_22945 PF00072 Response regulator receiver domain H9K44_22950 PF00248 Aldo/keto reductase family H9K44_22965 PF00654 Voltage gated chloride channel H9K44_22975 PF01566 Natural resistance-associated macrophage protein H9K44_22980 PF01227 GTP cyclohydrolase I H9K44_22985 PF03453 MoeA N-terminal region (domain I and II) H9K44_22985 PF00994 Probable molybdopterin binding domain H9K44_22985 PF03454 MoeA C-terminal region (domain IV) H9K44_22990 PF00899 ThiF family H9K44_23010 PF00581 Rhodanese-like domain H9K44_23015 PF03707 Bacterial signalling protein N terminal repeat H9K44_23015 PF00990 Diguanylate cyclase, GGDEF domain H9K44_23015 PF00563 EAL domain H9K44_23020 PF00704 Glycosyl hydrolases family 18 H9K44_23020 PF08329 Chitinase A, N-terminal domain H9K44_23030 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K44_23035 PF00456 Transketolase, thiamine diphosphate binding domain H9K44_23035 PF02780 Transketolase, C-terminal domain H9K44_23035 PF02779 Transketolase, pyrimidine binding domain H9K44_23040 PF08447 PAS fold H9K44_23040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_23045 PF07690 Major Facilitator Superfamily H9K44_23050 PF00793 DAHP synthetase I family H9K44_23055 PF01389 OmpA-like transmembrane domain H9K44_23055 PF00691 OmpA family H9K44_23060 PF13419 Haloacid dehalogenase-like hydrolase H9K44_23065 PF00472 RF-1 domain H9K44_23070 PF00672 HAMP domain H9K44_23070 PF12729 Four helix bundle sensory module for signal transduction H9K44_23070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K44_23075 PF00873 AcrB/AcrD/AcrF family H9K44_23080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_23085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K44_23090 PF01546 Peptidase family M20/M25/M40 H9K44_23090 PF07687 Peptidase dimerisation domain H9K44_23105 PF00072 Response regulator receiver domain H9K44_23105 PF00196 Bacterial regulatory proteins, luxR family H9K44_23110 PF00672 HAMP domain H9K44_23110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_23110 PF07730 Histidine kinase H9K44_23110 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H9K44_23115 PF12838 4Fe-4S dicluster domain H9K44_23115 PF13187 4Fe-4S dicluster domain H9K44_23125 PF01568 Molydopterin dinucleotide binding domain H9K44_23125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K44_23125 PF00384 Molybdopterin oxidoreductase H9K44_23130 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H9K44_23135 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K44_23145 PF00561 alpha/beta hydrolase fold H9K44_23145 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H9K44_23155 PF00108 Thiolase, N-terminal domain H9K44_23155 PF02803 Thiolase, C-terminal domain H9K44_23160 PF00106 short chain dehydrogenase H9K44_23165 PF01810 LysE type translocator H9K44_23175 PF02355 Protein export membrane protein H9K44_23175 PF07549 SecD/SecF GG Motif H9K44_23180 PF02355 Protein export membrane protein H9K44_23180 PF13721 SecD export protein N-terminal TM region H9K44_23180 PF07549 SecD/SecF GG Motif H9K44_23205 PF01037 Lrp/AsnC ligand binding domain H9K44_23225 PF00529 HlyD membrane-fusion protein of T1SS H9K44_23225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K44_23235 PF00072 Response regulator receiver domain H9K44_23235 PF09308 LuxQ, periplasmic H9K44_23235 PF00512 His Kinase A (phospho-acceptor) domain H9K44_23235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_23240 PF13407 Periplasmic binding protein domain H9K44_23245 PF01541 GIY-YIG catalytic domain H9K44_23250 PF04337 Protein of unknown function, DUF480 H9K44_23260 PF04363 Protein of unknown function (DUF496) H9K44_23265 PF01554 MatE H9K44_23270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9K44_23275 PF00072 Response regulator receiver domain H9K44_23275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K44_23275 PF01627 Hpt domain H9K44_23275 PF00512 His Kinase A (phospho-acceptor) domain H9K44_23275 PF00672 HAMP domain H9K44_23275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_23280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K44_23280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K44_23300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K44_23300 PF03466 LysR substrate binding domain H9K44_23305 PF01037 Lrp/AsnC ligand binding domain H9K44_23305 PF13404 AsnC-type helix-turn-helix domain H9K44_23310 PF13520 Amino acid permease H9K44_23315 PF00392 Bacterial regulatory proteins, gntR family H9K44_23315 PF00155 Aminotransferase class I and II H9K44_23325 PF03109 ABC1 family H9K44_23330 PF03448 MgtE intracellular N domain H9K44_23330 PF00571 CBS domain H9K44_23330 PF01769 Divalent cation transporter H9K44_23335 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H9K44_23340 PF07969 Amidohydrolase family H9K44_23350 PF01966 HD domain H9K44_23360 PF07690 Major Facilitator Superfamily H9K44_23370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K44_23375 PF00255 Glutathione peroxidase H9K44_23390 PF01323 DSBA-like thioredoxin domain H9K44_23405 PF00106 short chain dehydrogenase H9K44_23410 PF00072 Response regulator receiver domain H9K44_23410 PF00486 Transcriptional regulatory protein, C terminal H9K44_23415 PF00672 HAMP domain H9K44_23415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K44_23415 PF00512 His Kinase A (phospho-acceptor) domain H9K44_23425 PF01219 Prokaryotic diacylglycerol kinase H9K44_23430 PF00884 Sulfatase H9K44_23430 PF08019 Phosphoethanolamine transferase EptA/EptB H9K44_23435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold