locus-tag class description A6J30_00005 PF00563 EAL domain A6J30_00005 PF00990 Diguanylate cyclase, GGDEF domain A6J30_00005 PF03707 Bacterial signalling protein N terminal repeat A6J30_00020 PF04204 Homoserine O-succinyltransferase A6J30_00030 PF13520 Amino acid permease A6J30_00035 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J30_00040 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A6J30_00045 PF01810 LysE type translocator A6J30_00055 PF01235 Sodium:alanine symporter family A6J30_00080 PF00884 Sulfatase A6J30_00085 PF08521 Two-component sensor kinase N-terminal A6J30_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_00085 PF00512 His Kinase A (phospho-acceptor) domain A6J30_00090 PF00072 Response regulator receiver domain A6J30_00090 PF00486 Transcriptional regulatory protein, C terminal A6J30_00110 PF00501 AMP-binding enzyme A6J30_00120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A6J30_00125 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_00130 PF00571 CBS domain A6J30_00130 PF00005 ABC transporter A6J30_00145 PF02028 BCCT, betaine/carnitine/choline family transporter A6J30_00150 PF00583 Acetyltransferase (GNAT) family A6J30_00155 PF00202 Aminotransferase class-III A6J30_00160 PF06339 Ectoine synthase A6J30_00165 PF13840 ACT domain A6J30_00165 PF00696 Amino acid kinase family A6J30_00170 PF00034 Cytochrome c A6J30_00170 PF03150 Di-haem cytochrome c peroxidase A6J30_00185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_00200 PF00989 PAS fold A6J30_00200 PF17203 Single cache domain 3 A6J30_00200 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A6J30_00205 PF12431 Transcriptional regulator A6J30_00205 PF00072 Response regulator receiver domain A6J30_00210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A6J30_00210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A6J30_00215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6J30_00220 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A6J30_00220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J30_00245 PF01590 GAF domain A6J30_00245 PF00158 Sigma-54 interaction domain A6J30_00245 PF02954 Bacterial regulatory protein, Fis family A6J30_00250 PF00171 Aldehyde dehydrogenase family A6J30_00270 PF12833 Helix-turn-helix domain A6J30_00290 PF16693 Inner membrane component of T3SS, periplasmic domain A6J30_00290 PF16697 Inner membrane component of T3SS, cytoplasmic domain A6J30_00300 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF A6J30_00305 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) A6J30_00315 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI A6J30_00320 PF01514 Secretory protein of YscJ/FliF family A6J30_00330 PF02108 Flagellar assembly protein FliH A6J30_00340 PF02661 Fic/DOC family A6J30_00370 PF12146 Serine aminopeptidase, S33 A6J30_00375 PF12146 Serine aminopeptidase, S33 A6J30_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_00380 PF03466 LysR substrate binding domain A6J30_00385 PF01312 FlhB HrpN YscU SpaS Family A6J30_00390 PF01311 Bacterial export proteins, family 1 A6J30_00395 PF01313 Bacterial export proteins, family 3 A6J30_00400 PF00813 FliP family A6J30_00405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J30_00420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_00420 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J30_00420 PF18269 T3SS EscN ATPase C-terminal domain A6J30_00425 PF07201 HrpJ-like domain A6J30_00430 PF09059 TyeA A6J30_00450 PF00771 FHIPEP family A6J30_00455 PF09621 Type III secretion system regulator (LcrR) A6J30_00460 PF07216 LcrG protein A6J30_00465 PF04792 V antigen (LcrV) protein A6J30_00470 PF07720 Tetratricopeptide repeat A6J30_00480 PF05844 YopD protein A6J30_00490 PF01925 Sulfite exporter TauE/SafE A6J30_00495 PF01970 Tripartite tricarboxylate transporter TctA family A6J30_00525 PF00285 Citrate synthase, C-terminal domain A6J30_00530 PF00694 Aconitase C-terminal domain A6J30_00530 PF00330 Aconitase family (aconitate hydratase) A6J30_00535 PF04303 PrpF protein A6J30_00540 PF16177 Acetyl-coenzyme A synthetase N-terminus A6J30_00540 PF13193 AMP-binding enzyme C-terminal domain A6J30_00540 PF00501 AMP-binding enzyme A6J30_00550 PF00089 Trypsin A6J30_00565 PF04055 Radical SAM superfamily A6J30_00570 PF06508 Queuosine biosynthesis protein QueC A6J30_00575 PF17158 Membrane-associated sensor, integral membrane domain A6J30_00575 PF00990 Diguanylate cyclase, GGDEF domain A6J30_00585 PF00691 OmpA family A6J30_00585 PF05736 OprF membrane domain A6J30_00600 PF00691 OmpA family A6J30_00600 PF05736 OprF membrane domain A6J30_00615 PF17785 PUA-like domain A6J30_00615 PF10672 S-adenosylmethionine-dependent methyltransferase A6J30_00625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_00625 PF02743 Cache domain A6J30_00625 PF00672 HAMP domain A6J30_00630 PF00708 Acylphosphatase A6J30_00635 PF04358 DsrC like protein A6J30_00645 PF01027 Inhibitor of apoptosis-promoting Bax1 A6J30_00650 PF00005 ABC transporter A6J30_00655 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_00660 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_00665 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_00670 PF10414 Sirohaem synthase dimerisation region A6J30_00670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J30_00670 PF14824 Sirohaem biosynthesis protein central A6J30_00680 PF04461 Protein of unknown function (DUF520) A6J30_00685 PF00793 DAHP synthetase I family A6J30_00705 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A6J30_00705 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A6J30_00705 PF01189 16S rRNA methyltransferase RsmB/F A6J30_00715 PF02470 MlaD protein A6J30_00720 PF04403 Paraquat-inducible protein A A6J30_00725 PF00005 ABC transporter A6J30_00725 PF00664 ABC transporter transmembrane region A6J30_00730 PF13185 GAF domain A6J30_00735 PF04352 ProQ/FINO family A6J30_00735 PF17516 ProQ C-terminal domain A6J30_00740 PF00595 PDZ domain A6J30_00740 PF11818 C-terminal domain of tail specific protease (DUF3340) A6J30_00740 PF03572 Peptidase family S41 A6J30_00740 PF17804 Tail specific protease N-terminal domain A6J30_00750 PF11940 Domain of unknown function (DUF3458) Ig-like fold A6J30_00750 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A6J30_00750 PF01433 Peptidase family M1 domain A6J30_00760 PF05088 Bacterial NAD-glutamate dehydrogenase A6J30_00765 PF01180 Dihydroorotate dehydrogenase A6J30_00770 PF07126 Cell-division protein ZapC A6J30_00775 PF01170 Putative RNA methylase family UPF0020 A6J30_00775 PF02926 THUMP domain A6J30_00775 PF10672 S-adenosylmethionine-dependent methyltransferase A6J30_00795 PF04957 Ribosome modulation factor A6J30_00800 PF07977 FabA-like domain A6J30_00805 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J30_00805 PF13654 AAA domain A6J30_00810 PF17414 MatP C-terminal ribbon-helix-helix domain A6J30_00810 PF06303 MatP N-terminal domain A6J30_00845 PF05840 Bacteriophage replication gene A protein (GPA) A6J30_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_01020 PF00512 His Kinase A (phospho-acceptor) domain A6J30_01020 PF09308 LuxQ, periplasmic A6J30_01020 PF00072 Response regulator receiver domain A6J30_01035 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6J30_01050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A6J30_01050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6J30_01060 PF00403 Heavy-metal-associated domain A6J30_01075 PF00027 Cyclic nucleotide-binding domain A6J30_01075 PF13545 Crp-like helix-turn-helix domain A6J30_01080 PF00582 Universal stress protein family A6J30_01085 PF01171 PP-loop family A6J30_01105 PF08402 TOBE domain A6J30_01105 PF00005 ABC transporter A6J30_01110 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_01115 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_01120 PF13416 Bacterial extracellular solute-binding protein A6J30_01125 PF13416 Bacterial extracellular solute-binding protein A6J30_01130 PF02146 Sir2 family A6J30_01140 PF00909 Ammonium Transporter Family A6J30_01180 PF13247 4Fe-4S dicluster domain A6J30_01185 PF01568 Molydopterin dinucleotide binding domain A6J30_01185 PF00384 Molybdopterin oxidoreductase A6J30_01185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_01195 PF02613 Nitrate reductase delta subunit A6J30_01215 PF02634 FdhD/NarQ family A6J30_01220 PF12848 ABC transporter A6J30_01220 PF00005 ABC transporter A6J30_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_01225 PF00512 His Kinase A (phospho-acceptor) domain A6J30_01230 PF02954 Bacterial regulatory protein, Fis family A6J30_01230 PF00072 Response regulator receiver domain A6J30_01230 PF00158 Sigma-54 interaction domain A6J30_01235 PF12849 PBP superfamily domain A6J30_01240 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_01245 PF00005 ABC transporter A6J30_01245 PF08402 TOBE domain A6J30_01250 PF12804 MobA-like NTP transferase domain A6J30_01255 PF00994 Probable molybdopterin binding domain A6J30_01255 PF03453 MoeA N-terminal region (domain I and II) A6J30_01255 PF03454 MoeA C-terminal region (domain IV) A6J30_01265 PF00480 ROK family A6J30_01305 PF17202 Single cache domain 3 A6J30_01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_01305 PF00672 HAMP domain A6J30_01310 PF00877 NlpC/P60 family A6J30_01320 PF05230 MASE2 domain A6J30_01320 PF00990 Diguanylate cyclase, GGDEF domain A6J30_01325 PF00072 Response regulator receiver domain A6J30_01325 PF01339 CheB methylesterase A6J30_01340 PF00677 Lumazine binding domain A6J30_01345 PF01554 MatE A6J30_01355 PF01068 ATP dependent DNA ligase domain A6J30_01355 PF14743 DNA ligase OB-like domain A6J30_01360 PF01740 STAS domain A6J30_01370 PF02563 Polysaccharide biosynthesis/export protein A6J30_01370 PF10531 SLBB domain A6J30_01385 PF02954 Bacterial regulatory protein, Fis family A6J30_01385 PF00072 Response regulator receiver domain A6J30_01385 PF00158 Sigma-54 interaction domain A6J30_01390 PF13439 Glycosyltransferase Family 4 A6J30_01390 PF00534 Glycosyl transferases group 1 A6J30_01395 PF13439 Glycosyltransferase Family 4 A6J30_01395 PF00534 Glycosyl transferases group 1 A6J30_01425 PF13439 Glycosyltransferase Family 4 A6J30_01425 PF00534 Glycosyl transferases group 1 A6J30_01430 PF00535 Glycosyl transferase family 2 A6J30_01435 PF02397 Bacterial sugar transferase A6J30_01445 PF02028 BCCT, betaine/carnitine/choline family transporter A6J30_01460 PF11898 Domain of unknown function (DUF3418) A6J30_01460 PF04408 Helicase associated domain (HA2) A6J30_01460 PF00270 DEAD/DEAH box helicase A6J30_01460 PF00271 Helicase conserved C-terminal domain A6J30_01460 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A6J30_01465 PF02525 Flavodoxin-like fold A6J30_01475 PF02613 Nitrate reductase delta subunit A6J30_01480 PF04976 DMSO reductase anchor subunit (DmsC) A6J30_01485 PF12800 4Fe-4S binding domain A6J30_01485 PF13247 4Fe-4S dicluster domain A6J30_01490 PF01568 Molydopterin dinucleotide binding domain A6J30_01490 PF00384 Molybdopterin oxidoreductase A6J30_01490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_01520 PF17158 Membrane-associated sensor, integral membrane domain A6J30_01520 PF00990 Diguanylate cyclase, GGDEF domain A6J30_01530 PF00012 Hsp70 protein A6J30_01535 PF00012 Hsp70 protein A6J30_01560 PF00664 ABC transporter transmembrane region A6J30_01560 PF00005 ABC transporter A6J30_01565 PF00005 ABC transporter A6J30_01565 PF00664 ABC transporter transmembrane region A6J30_01585 PF03222 Tryptophan/tyrosine permease family A6J30_01590 PF00465 Iron-containing alcohol dehydrogenase A6J30_01595 PF01966 HD domain A6J30_01675 PF01037 Lrp/AsnC ligand binding domain A6J30_01710 PF00069 Protein kinase domain A6J30_01735 PF04717 Type VI secretion system, phage-baseplate injector A6J30_01740 PF05638 Type VI secretion system effector, Hcp A6J30_01745 PF17871 AAA lid domain A6J30_01745 PF10431 C-terminal, D2-small domain, of ClpB protein A6J30_01745 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_01745 PF07724 AAA domain (Cdc48 subfamily) A6J30_01750 PF00158 Sigma-54 interaction domain A6J30_01750 PF02954 Bacterial regulatory protein, Fis family A6J30_01780 PF08525 Opacity-associated protein A N-terminal motif A6J30_01780 PF01551 Peptidase family M23 A6J30_01780 PF01476 LysM domain A6J30_01785 PF03741 Integral membrane protein TerC family A6J30_01795 PF04055 Radical SAM superfamily A6J30_01800 PF11230 Protein of unknown function (DUF3029) A6J30_01805 PF01810 LysE type translocator A6J30_01810 PF01966 HD domain A6J30_01810 PF11871 Domain of unknown function (DUF3391) A6J30_01815 PF00990 Diguanylate cyclase, GGDEF domain A6J30_01815 PF00563 EAL domain A6J30_01815 PF03707 Bacterial signalling protein N terminal repeat A6J30_01820 PF02954 Bacterial regulatory protein, Fis family A6J30_01820 PF00072 Response regulator receiver domain A6J30_01820 PF00158 Sigma-54 interaction domain A6J30_01825 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_01825 PF00512 His Kinase A (phospho-acceptor) domain A6J30_01830 PF00939 Sodium:sulfate symporter transmembrane region A6J30_01845 PF00300 Histidine phosphatase superfamily (branch 1) A6J30_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_01865 PF03466 LysR substrate binding domain A6J30_01870 PF08543 Phosphomethylpyrimidine kinase A6J30_01875 PF01546 Peptidase family M20/M25/M40 A6J30_01875 PF07687 Peptidase dimerisation domain A6J30_01880 PF12795 Mechanosensitive ion channel porin domain A6J30_01880 PF12794 Mechanosensitive ion channel inner membrane domain 1 A6J30_01880 PF00924 Mechanosensitive ion channel A6J30_01895 PF00005 ABC transporter A6J30_01900 PF02405 Permease MlaE A6J30_01915 PF13533 Biotin-lipoyl like A6J30_01960 PF14497 Glutathione S-transferase, C-terminal domain A6J30_01960 PF02798 Glutathione S-transferase, N-terminal domain A6J30_01970 PF04209 homogentisate 1,2-dioxygenase A6J30_01975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_01985 PF07687 Peptidase dimerisation domain A6J30_01985 PF01546 Peptidase family M20/M25/M40 A6J30_01990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_01995 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02000 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_02000 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02005 PF00005 ABC transporter A6J30_02005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_02010 PF00005 ABC transporter A6J30_02010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_02020 PF01752 Collagenase A6J30_02020 PF08453 Peptidase family M9 N-terminal A6J30_02035 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02040 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02045 PF00005 ABC transporter A6J30_02045 PF08402 TOBE domain A6J30_02050 PF00701 Dihydrodipicolinate synthetase family A6J30_02055 PF02423 Ornithine cyclodeaminase/mu-crystallin family A6J30_02070 PF05544 Proline racemase A6J30_02075 PF00171 Aldehyde dehydrogenase family A6J30_02080 PF00392 Bacterial regulatory proteins, gntR family A6J30_02100 PF05971 RNA methyltransferase A6J30_02105 PF01863 Protein of unknown function DUF45 A6J30_02110 PF04991 LicD family A6J30_02115 PF16363 GDP-mannose 4,6 dehydratase A6J30_02120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6J30_02140 PF03466 LysR substrate binding domain A6J30_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_02160 PF00005 ABC transporter A6J30_02165 PF01032 FecCD transport family A6J30_02170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A6J30_02190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A6J30_02195 PF02654 Cobalamin-5-phosphate synthase A6J30_02200 PF02277 Phosphoribosyltransferase A6J30_02205 PF13460 NAD(P)H-binding A6J30_02215 PF08411 Exonuclease C-terminal A6J30_02215 PF00929 Exonuclease A6J30_02220 PF03788 LrgA family A6J30_02225 PF04172 LrgB-like family A6J30_02230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J30_02230 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region A6J30_02235 PF02222 ATP-grasp domain A6J30_02240 PF05724 Thiopurine S-methyltransferase (TPMT) A6J30_02250 PF00216 Bacterial DNA-binding protein A6J30_02260 PF03483 B3/4 domain A6J30_02260 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A6J30_02260 PF01588 Putative tRNA binding domain A6J30_02260 PF03147 Ferredoxin-fold anticodon binding domain A6J30_02260 PF03484 tRNA synthetase B5 domain A6J30_02265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A6J30_02265 PF01409 tRNA synthetases class II core domain (F) A6J30_02270 PF00990 Diguanylate cyclase, GGDEF domain A6J30_02270 PF17158 Membrane-associated sensor, integral membrane domain A6J30_02300 PF01906 Putative heavy-metal-binding A6J30_02305 PF00453 Ribosomal protein L20 A6J30_02310 PF01632 Ribosomal protein L35 A6J30_02315 PF00707 Translation initiation factor IF-3, C-terminal domain A6J30_02315 PF05198 Translation initiation factor IF-3, N-terminal domain A6J30_02320 PF03129 Anticodon binding domain A6J30_02320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6J30_02320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J30_02320 PF02824 TGS domain A6J30_02335 PF07702 UTRA domain A6J30_02335 PF00392 Bacterial regulatory proteins, gntR family A6J30_02340 PF01979 Amidohydrolase family A6J30_02345 PF00491 Arginase family A6J30_02350 PF17391 Urocanase N-terminal domain A6J30_02350 PF17392 Urocanase C-terminal domain A6J30_02350 PF01175 Urocanase Rossmann-like domain A6J30_02355 PF00221 Aromatic amino acid lyase A6J30_02365 PF04191 Phospholipid methyltransferase A6J30_02370 PF13183 4Fe-4S dicluster domain A6J30_02370 PF02913 FAD linked oxidases, C-terminal domain A6J30_02370 PF01565 FAD binding domain A6J30_02385 PF05736 OprF membrane domain A6J30_02385 PF00691 OmpA family A6J30_02405 PF01259 SAICAR synthetase A6J30_02410 PF09423 PhoD-like phosphatase A6J30_02410 PF16655 PhoD-like phosphatase, N-terminal domain A6J30_02420 PF02253 Phospholipase A1 A6J30_02425 PF08482 ATP-dependent helicase C-terminal A6J30_02425 PF04408 Helicase associated domain (HA2) A6J30_02425 PF00270 DEAD/DEAH box helicase A6J30_02425 PF00271 Helicase conserved C-terminal domain A6J30_02430 PF00390 Malic enzyme, N-terminal domain A6J30_02430 PF03949 Malic enzyme, NAD binding domain A6J30_02435 PF02698 DUF218 domain A6J30_02440 PF00939 Sodium:sulfate symporter transmembrane region A6J30_02445 PF00990 Diguanylate cyclase, GGDEF domain A6J30_02445 PF00072 Response regulator receiver domain A6J30_02455 PF00266 Aminotransferase class-V A6J30_02465 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_02470 PF00664 ABC transporter transmembrane region A6J30_02470 PF00005 ABC transporter A6J30_02475 PF00664 ABC transporter transmembrane region A6J30_02475 PF00005 ABC transporter A6J30_02480 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_02485 PF00266 Aminotransferase class-V A6J30_02495 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_02495 PF00512 His Kinase A (phospho-acceptor) domain A6J30_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_02510 PF04993 TfoX N-terminal domain A6J30_02510 PF04994 TfoX C-terminal domain A6J30_02530 PF03956 Lysine exporter LysO A6J30_02540 PF00282 Pyridoxal-dependent decarboxylase conserved domain A6J30_02545 PF01418 Helix-turn-helix domain, rpiR family A6J30_02545 PF01380 SIS domain A6J30_02550 PF00465 Iron-containing alcohol dehydrogenase A6J30_02555 PF00462 Glutaredoxin A6J30_02560 PF06826 Predicted Permease Membrane Region A6J30_02560 PF02080 TrkA-C domain A6J30_02565 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6J30_02565 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6J30_02565 PF07055 Enoyl reductase FAD binding domain A6J30_02570 PF09317 Domain of unknown function (DUF1974) A6J30_02570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J30_02570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J30_02570 PF02770 Acyl-CoA dehydrogenase, middle domain A6J30_02575 PF00440 Bacterial regulatory proteins, tetR family A6J30_02575 PF16295 Tetracyclin repressor-like, C-terminal domain A6J30_02580 PF06965 Na+/H+ antiporter 1 A6J30_02595 PF00005 ABC transporter A6J30_02600 PF01554 MatE A6J30_02605 PF11066 Protein of unknown function (DUF2867) A6J30_02605 PF13460 NAD(P)H-binding A6J30_02610 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J30_02625 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) A6J30_02640 PF07690 Major Facilitator Superfamily A6J30_02645 PF00849 RNA pseudouridylate synthase A6J30_02645 PF01479 S4 domain A6J30_02650 PF04851 Type III restriction enzyme, res subunit A6J30_02650 PF00271 Helicase conserved C-terminal domain A6J30_02660 PF00486 Transcriptional regulatory protein, C terminal A6J30_02660 PF00072 Response regulator receiver domain A6J30_02665 PF00672 HAMP domain A6J30_02665 PF00512 His Kinase A (phospho-acceptor) domain A6J30_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_02670 PF01386 Ribosomal L25p family A6J30_02685 PF02872 5'-nucleotidase, C-terminal domain A6J30_02685 PF00149 Calcineurin-like phosphoesterase A6J30_02695 PF06945 Protein of unknown function (DUF1289) A6J30_02705 PF00196 Bacterial regulatory proteins, luxR family A6J30_02705 PF00072 Response regulator receiver domain A6J30_02710 PF00512 His Kinase A (phospho-acceptor) domain A6J30_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_02720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6J30_02720 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_02730 PF09335 SNARE associated Golgi protein A6J30_02735 PF13416 Bacterial extracellular solute-binding protein A6J30_02740 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02745 PF00005 ABC transporter A6J30_02750 PF01066 CDP-alcohol phosphatidyltransferase A6J30_02760 PF00158 Sigma-54 interaction domain A6J30_02760 PF01590 GAF domain A6J30_02765 PF03063 Prismane/CO dehydrogenase family A6J30_02770 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_02770 PF00175 Oxidoreductase NAD-binding domain A6J30_02770 PF00970 Oxidoreductase FAD-binding domain A6J30_02780 PF00849 RNA pseudouridylate synthase A6J30_02785 PF00672 HAMP domain A6J30_02785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_02785 PF12729 Four helix bundle sensory module for signal transduction A6J30_02790 PF00209 Sodium:neurotransmitter symporter family A6J30_02795 PF13396 Phospholipase_D-nuclease N-terminal A6J30_02795 PF13091 PLD-like domain A6J30_02800 PF01053 Cys/Met metabolism PLP-dependent enzyme A6J30_02805 PF00561 alpha/beta hydrolase fold A6J30_02810 PF03280 Proteobacterial lipase chaperone protein A6J30_02815 PF03352 Methyladenine glycosylase A6J30_02820 PF00873 AcrB/AcrD/AcrF family A6J30_02825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_02830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_02835 PF04024 PspC domain A6J30_02840 PF06667 Phage shock protein B A6J30_02845 PF04012 PspA/IM30 family A6J30_02850 PF02954 Bacterial regulatory protein, Fis family A6J30_02850 PF00158 Sigma-54 interaction domain A6J30_02855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_02860 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02865 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_02865 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_02870 PF00005 ABC transporter A6J30_02870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_02875 PF00005 ABC transporter A6J30_02885 PF02833 DHHA2 domain A6J30_02885 PF01368 DHH family A6J30_02895 PF16875 Glycosyl hydrolase family 36 N-terminal domain A6J30_02895 PF16874 Glycosyl hydrolase family 36 C-terminal domain A6J30_02900 PF01568 Molydopterin dinucleotide binding domain A6J30_02900 PF18364 Molybdopterin oxidoreductase N-terminal domain A6J30_02900 PF00384 Molybdopterin oxidoreductase A6J30_02905 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J30_02910 PF06796 Periplasmic nitrate reductase protein NapE A6J30_02915 PF03649 Uncharacterised protein family (UPF0014) A6J30_02925 PF01226 Formate/nitrite transporter A6J30_02950 PF02698 DUF218 domain A6J30_02955 PF00265 Thymidine kinase A6J30_02960 PF01406 tRNA synthetases class I (C) catalytic domain A6J30_02960 PF09190 DALR domain A6J30_02965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6J30_02970 PF00149 Calcineurin-like phosphoesterase A6J30_02975 PF00563 EAL domain A6J30_02975 PF08668 HDOD domain A6J30_02980 PF02810 SEC-C motif A6J30_02985 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A6J30_02985 PF01502 Phosphoribosyl-AMP cyclohydrolase A6J30_02990 PF00977 Histidine biosynthesis protein A6J30_02995 PF00977 Histidine biosynthesis protein A6J30_03000 PF00117 Glutamine amidotransferase class-I A6J30_03005 PF08645 Polynucleotide kinase 3 phosphatase A6J30_03005 PF00475 Imidazoleglycerol-phosphate dehydratase A6J30_03010 PF00155 Aminotransferase class I and II A6J30_03015 PF00815 Histidinol dehydrogenase A6J30_03020 PF01634 ATP phosphoribosyltransferase A6J30_03020 PF08029 HisG, C-terminal domain A6J30_03025 PF02954 Bacterial regulatory protein, Fis family A6J30_03025 PF00072 Response regulator receiver domain A6J30_03025 PF00158 Sigma-54 interaction domain A6J30_03035 PF03553 Na+/H+ antiporter family A6J30_03040 PF00816 H-NS histone family A6J30_03045 PF00294 pfkB family carbohydrate kinase A6J30_03060 PF04356 Protein of unknown function (DUF489) A6J30_03065 PF08328 Adenylosuccinate lyase C-terminal A6J30_03065 PF00206 Lyase A6J30_03105 PF00106 short chain dehydrogenase A6J30_03115 PF01435 Peptidase family M48 A6J30_03130 PF08241 Methyltransferase domain A6J30_03135 PF00155 Aminotransferase class I and II A6J30_03140 PF04055 Radical SAM superfamily A6J30_03140 PF06968 Biotin and Thiamin Synthesis associated domain A6J30_03150 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6J30_03165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J30_03165 PF02403 Seryl-tRNA synthetase N-terminal domain A6J30_03170 PF16193 AAA C-terminal domain A6J30_03170 PF12002 MgsA AAA+ ATPase C terminal A6J30_03170 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_03175 PF03548 Outer membrane lipoprotein carrier protein LolA A6J30_03180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A6J30_03180 PF01580 FtsK/SpoIIIE family A6J30_03180 PF09397 Ftsk gamma domain A6J30_03180 PF17854 FtsK alpha domain A6J30_03185 PF01037 Lrp/AsnC ligand binding domain A6J30_03190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6J30_03190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6J30_03200 PF03466 LysR substrate binding domain A6J30_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_03210 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A6J30_03215 PF03372 Endonuclease/Exonuclease/phosphatase family A6J30_03225 PF00579 tRNA synthetases class I (W and Y) A6J30_03245 PF00873 AcrB/AcrD/AcrF family A6J30_03250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_03250 PF00529 HlyD membrane-fusion protein of T1SS A6J30_03260 PF02743 Cache domain A6J30_03260 PF00672 HAMP domain A6J30_03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_03275 PF00899 ThiF family A6J30_03285 PF00580 UvrD/REP helicase N-terminal domain A6J30_03285 PF13361 UvrD-like helicase C-terminal domain A6J30_03320 PF13356 Arm DNA-binding domain A6J30_03320 PF00589 Phage integrase family A6J30_03365 PF06610 L-alanine exporter A6J30_03370 PF00512 His Kinase A (phospho-acceptor) domain A6J30_03370 PF09308 LuxQ, periplasmic A6J30_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_03370 PF00072 Response regulator receiver domain A6J30_03380 PF03738 Glutathionylspermidine synthase preATP-grasp A6J30_03390 PF03994 Domain of Unknown Function (DUF350) A6J30_03400 PF02445 Quinolinate synthetase A protein A6J30_03405 PF13174 Tetratricopeptide repeat A6J30_03405 PF16331 TolA binding protein trimerisation A6J30_03410 PF00691 OmpA family A6J30_03415 PF07676 WD40-like Beta Propeller Repeat A6J30_03415 PF04052 TolB amino-terminal domain A6J30_03425 PF02472 Biopolymer transport protein ExbD/TolR A6J30_03430 PF01618 MotA/TolQ/ExbB proton channel family A6J30_03435 PF03061 Thioesterase superfamily A6J30_03445 PF08173 Membrane bound YbgT-like protein A6J30_03450 PF02322 Cytochrome bd terminal oxidase subunit II A6J30_03455 PF01654 Cytochrome bd terminal oxidase subunit I A6J30_03460 PF17864 RuvB AAA lid domain A6J30_03460 PF05491 RuvB C-terminal winged helix domain A6J30_03460 PF05496 Holliday junction DNA helicase RuvB P-loop domain A6J30_03465 PF01330 RuvA N terminal domain A6J30_03465 PF07499 RuvA, C-terminal domain A6J30_03470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_03470 PF00672 HAMP domain A6J30_03470 PF02203 Tar ligand binding domain homologue A6J30_03475 PF02075 Crossover junction endodeoxyribonuclease RuvC A6J30_03480 PF02938 GAD domain A6J30_03480 PF00152 tRNA synthetases class II (D, K and N) A6J30_03480 PF01336 OB-fold nucleic acid binding domain A6J30_03485 PF01904 Protein of unknown function DUF72 A6J30_03490 PF13649 Methyltransferase domain A6J30_03495 PF08003 Protein of unknown function (DUF1698) A6J30_03505 PF18030 RimK PreATP-grasp domain A6J30_03505 PF08443 RimK-like ATP-grasp domain A6J30_03515 PF18030 RimK PreATP-grasp domain A6J30_03515 PF08443 RimK-like ATP-grasp domain A6J30_03525 PF04310 MukB N-terminal A6J30_03525 PF16330 MukB hinge domain A6J30_03530 PF04288 MukE-like family A6J30_03535 PF03882 MukF winged-helix domain A6J30_03535 PF17193 MukF C-terminal domain A6J30_03535 PF17192 MukF middle domain A6J30_03545 PF02698 DUF218 domain A6J30_03550 PF00072 Response regulator receiver domain A6J30_03550 PF00486 Transcriptional regulatory protein, C terminal A6J30_03555 PF02613 Nitrate reductase delta subunit A6J30_03560 PF00356 Bacterial regulatory proteins, lacI family A6J30_03565 PF04993 TfoX N-terminal domain A6J30_03565 PF04994 TfoX C-terminal domain A6J30_03585 PF00534 Glycosyl transferases group 1 A6J30_03585 PF08323 Starch synthase catalytic domain A6J30_03590 PF00483 Nucleotidyl transferase A6J30_03595 PF01751 Toprim domain A6J30_03595 PF01131 DNA topoisomerase A6J30_03595 PF08272 Topoisomerase I zinc-ribbon-like A6J30_03595 PF01396 Topoisomerase DNA binding C4 zinc finger A6J30_03600 PF10692 Protein of unknown function (DUF2498) A6J30_03605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6J30_03615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A6J30_03620 PF04377 Arginine-tRNA-protein transferase, C terminus A6J30_03620 PF04376 Arginine-tRNA-protein transferase, N terminus A6J30_03625 PF01176 Translation initiation factor 1A / IF-1 A6J30_03635 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_03635 PF07724 AAA domain (Cdc48 subfamily) A6J30_03635 PF02861 Clp amino terminal domain, pathogenicity island component A6J30_03635 PF10431 C-terminal, D2-small domain, of ClpB protein A6J30_03635 PF17871 AAA lid domain A6J30_03640 PF02617 ATP-dependent Clp protease adaptor protein ClpS A6J30_03645 PF00313 'Cold-shock' DNA-binding domain A6J30_03650 PF03971 Monomeric isocitrate dehydrogenase A6J30_03655 PF00849 RNA pseudouridylate synthase A6J30_03660 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6J30_03670 PF13307 Helicase C-terminal domain A6J30_03670 PF06733 DEAD_2 A6J30_03675 PF01925 Sulfite exporter TauE/SafE A6J30_03680 PF07445 Primosomal replication protein priC A6J30_03685 PF10689 Protein of unknown function (DUF2496) A6J30_03690 PF03372 Endonuclease/Exonuclease/phosphatase family A6J30_03700 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_03705 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_03710 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_03715 PF00005 ABC transporter A6J30_03730 PF01228 Glycine radical A6J30_03730 PF02901 Pyruvate formate lyase-like A6J30_03740 PF04055 Radical SAM superfamily A6J30_03750 PF03887 YfbU domain A6J30_03755 PF06798 PrkA serine protein kinase C-terminal domain A6J30_03755 PF08298 PrkA AAA domain A6J30_03760 PF04285 Protein of unknown function (DUF444) A6J30_03765 PF04293 SpoVR like protein A6J30_03770 PF02348 Cytidylyltransferase A6J30_03775 PF03966 Trm112p-like protein A6J30_03780 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A6J30_03785 PF00664 ABC transporter transmembrane region A6J30_03785 PF00005 ABC transporter A6J30_03790 PF13567 Domain of unknown function (DUF4131) A6J30_03790 PF03772 Competence protein A6J30_03790 PF00753 Metallo-beta-lactamase superfamily A6J30_03800 PF02687 FtsX-like permease family A6J30_03800 PF12704 MacB-like periplasmic core domain A6J30_03805 PF00005 ABC transporter A6J30_03810 PF02687 FtsX-like permease family A6J30_03810 PF12704 MacB-like periplasmic core domain A6J30_03820 PF02559 CarD-like/TRCF domain A6J30_03820 PF00270 DEAD/DEAH box helicase A6J30_03820 PF00271 Helicase conserved C-terminal domain A6J30_03820 PF03461 TRCF domain A6J30_03820 PF17757 UvrB interaction domain A6J30_03835 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_03840 PF05728 Uncharacterised protein family (UPF0227) A6J30_03850 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A6J30_03850 PF13036 Peptidoglycan-synthase activator LpoB A6J30_03865 PF01230 HIT domain A6J30_03870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_03870 PF00672 HAMP domain A6J30_03880 PF01048 Phosphorylase superfamily A6J30_03885 PF00403 Heavy-metal-associated domain A6J30_03890 PF00571 CBS domain A6J30_03890 PF00478 IMP dehydrogenase / GMP reductase domain A6J30_03905 PF11953 Domain of unknown function (DUF3470) A6J30_03905 PF00037 4Fe-4S binding domain A6J30_03910 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6J30_03910 PF00588 SpoU rRNA Methylase family A6J30_03920 PF00990 Diguanylate cyclase, GGDEF domain A6J30_03920 PF17152 Periplasmic sensor domain A6J30_03930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6J30_03935 PF09619 Type III secretion system lipoprotein chaperone (YscW) A6J30_03950 PF01037 Lrp/AsnC ligand binding domain A6J30_03950 PF13404 AsnC-type helix-turn-helix domain A6J30_03955 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_03975 PF00873 AcrB/AcrD/AcrF family A6J30_03980 PF13533 Biotin-lipoyl like A6J30_04025 PF07690 Major Facilitator Superfamily A6J30_04030 PF03601 Conserved hypothetical protein 698 A6J30_04040 PF00501 AMP-binding enzyme A6J30_04040 PF13193 AMP-binding enzyme C-terminal domain A6J30_04045 PF13378 Enolase C-terminal domain-like A6J30_04050 PF00378 Enoyl-CoA hydratase/isomerase A6J30_04055 PF12697 Alpha/beta hydrolase family A6J30_04060 PF16582 Middle domain of thiamine pyrophosphate A6J30_04060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J30_04060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J30_04065 PF00425 chorismate binding enzyme A6J30_04070 PF00155 Aminotransferase class I and II A6J30_04080 PF01966 HD domain A6J30_04080 PF13286 Phosphohydrolase-associated domain A6J30_04100 PF13145 PPIC-type PPIASE domain A6J30_04105 PF00216 Bacterial DNA-binding protein A6J30_04110 PF02190 ATP-dependent protease La (LON) substrate-binding domain A6J30_04110 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_04110 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J30_04115 PF07724 AAA domain (Cdc48 subfamily) A6J30_04115 PF10431 C-terminal, D2-small domain, of ClpB protein A6J30_04115 PF06689 ClpX C4-type zinc finger A6J30_04120 PF00574 Clp protease A6J30_04125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_04125 PF05697 Bacterial trigger factor protein (TF) A6J30_04125 PF05698 Bacterial trigger factor protein (TF) C-terminus A6J30_04135 PF02743 Cache domain A6J30_04135 PF00512 His Kinase A (phospho-acceptor) domain A6J30_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_04140 PF00072 Response regulator receiver domain A6J30_04140 PF00158 Sigma-54 interaction domain A6J30_04140 PF02954 Bacterial regulatory protein, Fis family A6J30_04150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J30_04155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6J30_04160 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J30_04165 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A6J30_04185 PF02386 Cation transport protein A6J30_04190 PF02254 TrkA-N domain A6J30_04190 PF02080 TrkA-C domain A6J30_04195 PF00270 DEAD/DEAH box helicase A6J30_04195 PF00271 Helicase conserved C-terminal domain A6J30_04200 PF03471 Transporter associated domain A6J30_04200 PF00571 CBS domain A6J30_04200 PF01595 Cyclin M transmembrane N-terminal domain A6J30_04210 PF04820 Tryptophan halogenase A6J30_04235 PF00550 Phosphopantetheine attachment site A6J30_04240 PF00550 Phosphopantetheine attachment site A6J30_04255 PF07977 FabA-like domain A6J30_04260 PF00535 Glycosyl transferase family 2 A6J30_04265 PF00221 Aromatic amino acid lyase A6J30_04290 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J30_04290 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J30_04295 PF07977 FabA-like domain A6J30_04305 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J30_04305 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J30_04320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A6J30_04320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A6J30_04325 PF07662 Na+ dependent nucleoside transporter C-terminus A6J30_04325 PF07670 Nucleoside recognition A6J30_04325 PF01773 Na+ dependent nucleoside transporter N-terminus A6J30_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_04330 PF03466 LysR substrate binding domain A6J30_04335 PF13406 Transglycosylase SLT domain A6J30_04340 PF05166 YcgL domain A6J30_04345 PF03775 Septum formation inhibitor MinC, C-terminal domain A6J30_04345 PF05209 Septum formation inhibitor MinC, N-terminal domain A6J30_04350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A6J30_04355 PF03776 Septum formation topological specificity factor MinE A6J30_04360 PF01612 3'-5' exonuclease A6J30_04360 PF00570 HRDC domain A6J30_04365 PF13193 AMP-binding enzyme C-terminal domain A6J30_04365 PF00501 AMP-binding enzyme A6J30_04370 PF00561 alpha/beta hydrolase fold A6J30_04385 PF00814 Glycoprotease family A6J30_04390 PF04851 Type III restriction enzyme, res subunit A6J30_04390 PF13307 Helicase C-terminal domain A6J30_04395 PF00551 Formyl transferase A6J30_04395 PF01842 ACT domain A6J30_04400 PF06185 YecM protein A6J30_04405 PF05746 DALR anticodon binding domain A6J30_04405 PF00750 tRNA synthetases class I (R) A6J30_04405 PF03485 Arginyl tRNA synthetase N terminal domain A6J30_04420 PF02421 Ferrous iron transport protein B A6J30_04420 PF07670 Nucleoside recognition A6J30_04420 PF07664 Ferrous iron transport protein B C terminus A6J30_04420 PF17910 FeoB cytosolic helical domain A6J30_04425 PF04023 FeoA domain A6J30_04435 PF02311 AraC-like ligand binding domain A6J30_04435 PF12833 Helix-turn-helix domain A6J30_04440 PF01297 Zinc-uptake complex component A periplasmic A6J30_04445 PF00005 ABC transporter A6J30_04450 PF00950 ABC 3 transport family A6J30_04455 PF00549 CoA-ligase A6J30_04455 PF02629 CoA binding domain A6J30_04460 PF08442 ATP-grasp domain A6J30_04460 PF00549 CoA-ligase A6J30_04465 PF00364 Biotin-requiring enzyme A6J30_04465 PF02817 e3 binding domain A6J30_04465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6J30_04470 PF00676 Dehydrogenase E1 component A6J30_04470 PF16870 2-oxoglutarate dehydrogenase C-terminal A6J30_04470 PF02779 Transketolase, pyrimidine binding domain A6J30_04470 PF16078 2-oxoglutarate dehydrogenase N-terminus A6J30_04475 PF13085 2Fe-2S iron-sulfur cluster binding domain A6J30_04480 PF00890 FAD binding domain A6J30_04480 PF02910 Fumarate reductase flavoprotein C-term A6J30_04485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6J30_04490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6J30_04495 PF00285 Citrate synthase, C-terminal domain A6J30_04500 PF01784 NIF3 (NGG1p interacting factor 3) A6J30_04510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J30_04510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J30_04510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J30_04510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J30_04515 PF17206 SeqA protein N-terminal domain A6J30_04515 PF03925 SeqA protein C-terminal domain A6J30_04520 PF00561 alpha/beta hydrolase fold A6J30_04530 PF00258 Flavodoxin A6J30_04540 PF01475 Ferric uptake regulator family A6J30_04545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A6J30_04545 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J30_04550 PF02378 Phosphotransferase system, EIIC A6J30_04550 PF00367 phosphotransferase system, EIIB A6J30_04550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6J30_04560 PF01979 Amidohydrolase family A6J30_04565 PF00480 ROK family A6J30_04565 PF01047 MarR family A6J30_04570 PF02254 TrkA-N domain A6J30_04570 PF00999 Sodium/hydrogen exchanger family A6J30_04575 PF13537 Glutamine amidotransferase domain A6J30_04575 PF00733 Asparagine synthase A6J30_04580 PF02357 Transcription termination factor nusG A6J30_04585 PF00854 POT family A6J30_04590 PF00762 Ferrochelatase A6J30_04595 PF05191 Adenylate kinase, active site lid A6J30_04600 PF00183 Hsp90 protein A6J30_04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_04605 PF00486 Transcriptional regulatory protein, C terminal A6J30_04610 PF17323 Trans-membrane regulatory protein ToxS A6J30_04625 PF12850 Calcineurin-like phosphoesterase superfamily domain A6J30_04645 PF07556 Protein of unknown function (DUF1538) A6J30_04650 PF07556 Protein of unknown function (DUF1538) A6J30_04655 PF01370 NAD dependent epimerase/dehydratase family A6J30_04655 PF08338 Domain of unknown function (DUF1731) A6J30_04660 PF00106 short chain dehydrogenase A6J30_04665 PF00085 Thioredoxin A6J30_04670 PF01145 SPFH domain / Band 7 family A6J30_04670 PF16200 C-terminal region of band_7 A6J30_04680 PF03573 outer membrane porin, OprD family A6J30_04690 PF12826 Helix-hairpin-helix motif A6J30_04690 PF01653 NAD-dependent DNA ligase adenylation domain A6J30_04690 PF03120 NAD-dependent DNA ligase OB-fold domain A6J30_04690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A6J30_04690 PF00533 BRCA1 C Terminus (BRCT) domain A6J30_04695 PF04354 ZipA, C-terminal FtsZ-binding domain A6J30_04705 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_04715 PF00381 PTS HPr component phosphorylation site A6J30_04720 PF05524 PEP-utilising enzyme, N-terminal A6J30_04720 PF00391 PEP-utilising enzyme, mobile domain A6J30_04720 PF02896 PEP-utilising enzyme, TIM barrel domain A6J30_04725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6J30_04730 PF00700 Bacterial flagellin C-terminal helical region A6J30_04730 PF07196 Flagellin hook IN motif A6J30_04730 PF00669 Bacterial flagellin N-terminal helical region A6J30_04735 PF00669 Bacterial flagellin N-terminal helical region A6J30_04735 PF07196 Flagellin hook IN motif A6J30_04735 PF00700 Bacterial flagellin C-terminal helical region A6J30_04745 PF00700 Bacterial flagellin C-terminal helical region A6J30_04745 PF00669 Bacterial flagellin N-terminal helical region A6J30_04745 PF07196 Flagellin hook IN motif A6J30_04750 PF00669 Bacterial flagellin N-terminal helical region A6J30_04755 PF07196 Flagellin hook IN motif A6J30_04755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_04760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A6J30_04760 PF10135 Rod binding protein A6J30_04765 PF02119 Flagellar P-ring protein A6J30_04770 PF02107 Flagellar L-ring protein A6J30_04775 PF00460 Flagella basal body rod protein A6J30_04775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_04780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_04780 PF00460 Flagella basal body rod protein A6J30_04790 PF07559 Flagellar basal body protein FlaE A6J30_04790 PF00460 Flagella basal body rod protein A6J30_04790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_04795 PF03963 Flagellar hook capping protein - N-terminal region A6J30_04795 PF13860 FlgD Ig-like domain A6J30_04795 PF13861 FlgD Tudor-like domain A6J30_04800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_04800 PF00460 Flagella basal body rod protein A6J30_04805 PF00460 Flagella basal body rod protein A6J30_04810 PF01739 CheR methyltransferase, SAM binding domain A6J30_04810 PF03705 CheR methyltransferase, all-alpha domain A6J30_04815 PF00072 Response regulator receiver domain A6J30_04815 PF01584 CheW-like domain A6J30_04860 PF00691 OmpA family A6J30_04860 PF01389 OmpA-like transmembrane domain A6J30_04865 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J30_04870 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6J30_04875 PF13609 Gram-negative porin A6J30_04885 PF00403 Heavy-metal-associated domain A6J30_04900 PF00728 Glycosyl hydrolase family 20, catalytic domain A6J30_04900 PF02838 Glycosyl hydrolase family 20, domain 2 A6J30_04900 PF03173 Putative carbohydrate binding domain A6J30_04900 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A6J30_04920 PF01713 Smr domain A6J30_04925 PF01479 S4 domain A6J30_04925 PF00849 RNA pseudouridylate synthase A6J30_04930 PF04073 Aminoacyl-tRNA editing domain A6J30_04935 PF02872 5'-nucleotidase, C-terminal domain A6J30_04935 PF00149 Calcineurin-like phosphoesterase A6J30_04940 PF00793 DAHP synthetase I family A6J30_04945 PF13369 Transglutaminase-like superfamily A6J30_04950 PF04247 Invasion gene expression up-regulator, SirB A6J30_04955 PF13847 Methyltransferase domain A6J30_04955 PF17827 PrmC N-terminal domain A6J30_04960 PF00472 RF-1 domain A6J30_04960 PF03462 PCRF domain A6J30_04965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A6J30_04965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A6J30_04965 PF01488 Shikimate / quinate 5-dehydrogenase A6J30_04970 PF03550 Outer membrane lipoprotein LolB A6J30_04975 PF08544 GHMP kinases C terminal A6J30_04975 PF00288 GHMP kinases N terminal domain A6J30_04980 PF14572 Phosphoribosyl synthetase-associated domain A6J30_04980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A6J30_04985 PF01195 Peptidyl-tRNA hydrolase A6J30_04990 PF06071 Protein of unknown function (DUF933) A6J30_04990 PF01926 50S ribosome-binding GTPase A6J30_05105 PF01494 FAD binding domain A6J30_05110 PF01938 TRAM domain A6J30_05110 PF00919 Uncharacterized protein family UPF0004 A6J30_05110 PF04055 Radical SAM superfamily A6J30_05115 PF02562 PhoH-like protein A6J30_05120 PF02130 Uncharacterized protein family UPF0054 A6J30_05125 PF03471 Transporter associated domain A6J30_05125 PF00571 CBS domain A6J30_05130 PF00795 Carbon-nitrogen hydrolase A6J30_05135 PF07295 Zinc-ribbon containing domain A6J30_05140 PF13603 Leucyl-tRNA synthetase, Domain 2 A6J30_05140 PF08264 Anticodon-binding domain of tRNA A6J30_05140 PF00133 tRNA synthetases class I (I, L, M and V) A6J30_05145 PF04390 Lipopolysaccharide-assembly A6J30_05150 PF06144 DNA polymerase III, delta subunit A6J30_05150 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A6J30_05160 PF02590 Predicted SPOUT methyltransferase A6J30_05165 PF00905 Penicillin binding protein transpeptidase domain A6J30_05165 PF03717 Penicillin-binding Protein dimerisation domain A6J30_05170 PF01098 Cell cycle protein A6J30_05175 PF05036 Sporulation related domain A6J30_05175 PF03330 Lytic transglycolase A6J30_05180 PF07943 Penicillin-binding protein 5, C-terminal domain A6J30_05180 PF00768 D-alanyl-D-alanine carboxypeptidase A6J30_05185 PF04359 Protein of unknown function (DUF493) A6J30_05190 PF03099 Biotin/lipoate A/B protein ligase family A6J30_05195 PF04055 Radical SAM superfamily A6J30_05195 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A6J30_05200 PF00464 Serine hydroxymethyltransferase A6J30_05205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A6J30_05205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A6J30_05220 PF00128 Alpha amylase, catalytic domain A6J30_05220 PF16657 Maltogenic Amylase, C-terminal domain A6J30_05225 PF02378 Phosphotransferase system, EIIC A6J30_05225 PF00367 phosphotransferase system, EIIB A6J30_05230 PF00356 Bacterial regulatory proteins, lacI family A6J30_05245 PF09383 NIL domain A6J30_05245 PF00005 ABC transporter A6J30_05250 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_05255 PF03180 NLPA lipoprotein A6J30_05260 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) A6J30_05265 PF07348 Syd protein (SUKH-2) A6J30_05270 PF14489 QueF-like protein A6J30_05270 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A6J30_05280 PF00990 Diguanylate cyclase, GGDEF domain A6J30_05280 PF00072 Response regulator receiver domain A6J30_05285 PF03641 Possible lysine decarboxylase A6J30_05285 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases A6J30_05285 PF11892 Domain of unknown function (DUF3412) A6J30_05290 PF01367 5'-3' exonuclease, C-terminal SAM fold A6J30_05290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6J30_05295 PF01223 DNA/RNA non-specific endonuclease A6J30_05300 PF18125 RlmM ferredoxin-like domain A6J30_05300 PF01728 FtsJ-like methyltransferase A6J30_05305 PF04241 Protein of unknown function (DUF423) A6J30_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_05315 PF03466 LysR substrate binding domain A6J30_05320 PF02926 THUMP domain A6J30_05320 PF02568 Thiamine biosynthesis protein (ThiI) A6J30_05330 PF00691 OmpA family A6J30_05335 PF01618 MotA/TolQ/ExbB proton channel family A6J30_05340 PF02609 Exonuclease VII small subunit A6J30_05345 PF00348 Polyprenyl synthetase A6J30_05350 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A6J30_05350 PF02780 Transketolase, C-terminal domain A6J30_05350 PF02779 Transketolase, pyrimidine binding domain A6J30_05355 PF04608 Phosphatidylglycerophosphatase A A6J30_05360 PF00586 AIR synthase related protein, N-terminal domain A6J30_05360 PF02769 AIR synthase related protein, C-terminal domain A6J30_05365 PF01029 NusB family A6J30_05370 PF00885 6,7-dimethyl-8-ribityllumazine synthase A6J30_05375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6J30_05375 PF00925 GTP cyclohydrolase II A6J30_05380 PF00677 Lumazine binding domain A6J30_05385 PF01872 RibD C-terminal domain A6J30_05385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J30_05390 PF03477 ATP cone domain A6J30_05395 PF00171 Aldehyde dehydrogenase family A6J30_05400 PF00696 Amino acid kinase family A6J30_05400 PF01472 PUA domain A6J30_05405 PF07417 Sigma factor-binding transcriptional regulator Crl A6J30_05415 PF00156 Phosphoribosyl transferase domain A6J30_05420 PF00860 Permease family A6J30_05425 PF07687 Peptidase dimerisation domain A6J30_05425 PF01546 Peptidase family M20/M25/M40 A6J30_05450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A6J30_05450 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A6J30_05450 PF02769 AIR synthase related protein, C-terminal domain A6J30_05455 PF01464 Transglycosylase SLT domain A6J30_05455 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_05465 PF14437 MafB19-like deaminase A6J30_05470 PF03806 AbgT putative transporter family A6J30_05495 PF07963 Prokaryotic N-terminal methylation motif A6J30_05495 PF00114 Pilin (bacterial filament) A6J30_05500 PF07963 Prokaryotic N-terminal methylation motif A6J30_05500 PF00114 Pilin (bacterial filament) A6J30_05505 PF00684 DnaJ central domain A6J30_05505 PF00226 DnaJ domain A6J30_05505 PF01556 DnaJ C terminal domain A6J30_05510 PF00012 Hsp70 protein A6J30_05515 PF00375 Sodium:dicarboxylate symporter family A6J30_05520 PF01025 GrpE A6J30_05525 PF01513 ATP-NAD kinase A6J30_05535 PF02463 RecF/RecN/SMC N terminal domain A6J30_05540 PF04355 SmpA / OmlA family A6J30_05545 PF03658 RnfH family Ubiquitin A6J30_05550 PF03364 Polyketide cyclase / dehydrase and lipid transport A6J30_05555 PF01668 SmpB protein A6J30_05570 PF00075 RNase H A6J30_05590 PF00239 Resolvase, N terminal domain A6J30_05590 PF02796 Helix-turn-helix domain of resolvase A6J30_05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_05605 PF03466 LysR substrate binding domain A6J30_05610 PF00583 Acetyltransferase (GNAT) family A6J30_05610 PF00795 Carbon-nitrogen hydrolase A6J30_05630 PF00202 Aminotransferase class-III A6J30_05635 PF01053 Cys/Met metabolism PLP-dependent enzyme A6J30_05640 PF07969 Amidohydrolase family A6J30_05665 PF01266 FAD dependent oxidoreductase A6J30_05670 PF01235 Sodium:alanine symporter family A6J30_05680 PF01184 GPR1/FUN34/yaaH family A6J30_05685 PF00704 Glycosyl hydrolases family 18 A6J30_05685 PF06483 Chitinase C A6J30_05690 PF03553 Na+/H+ antiporter family A6J30_05695 PF00117 Glutamine amidotransferase class-I A6J30_05695 PF00958 GMP synthase C terminal domain A6J30_05695 PF02540 NAD synthase A6J30_05700 PF00478 IMP dehydrogenase / GMP reductase domain A6J30_05700 PF00571 CBS domain A6J30_05705 PF13742 OB-fold nucleic acid binding domain A6J30_05705 PF02601 Exonuclease VII, large subunit A6J30_05720 PF01926 50S ribosome-binding GTPase A6J30_05720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A6J30_05725 PF13360 PQQ-like domain A6J30_05730 PF09976 Tetratricopeptide repeat-like domain A6J30_05735 PF13393 Histidyl-tRNA synthetase A6J30_05735 PF03129 Anticodon binding domain A6J30_05740 PF04551 GcpE protein A6J30_05745 PF13464 Domain of unknown function (DUF4115) A6J30_05750 PF04055 Radical SAM superfamily A6J30_05755 PF00334 Nucleoside diphosphate kinase A6J30_05760 PF00883 Cytosol aminopeptidase family, catalytic domain A6J30_05760 PF12404 Peptidase A6J30_05765 PF04384 Iron-sulphur cluster assembly A6J30_05770 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_05775 PF00012 Hsp70 protein A6J30_05780 PF00226 DnaJ domain A6J30_05780 PF07743 HSCB C-terminal oligomerisation domain A6J30_05785 PF01521 Iron-sulphur cluster biosynthesis A6J30_05790 PF01592 NifU-like N terminal domain A6J30_05795 PF00266 Aminotransferase class-V A6J30_05800 PF02082 Transcriptional regulator A6J30_05805 PF00588 SpoU rRNA Methylase family A6J30_05810 PF00459 Inositol monophosphatase family A6J30_05815 PF02355 Protein export membrane protein A6J30_05815 PF07549 SecD/SecF GG Motif A6J30_05820 PF02355 Protein export membrane protein A6J30_05820 PF13721 SecD export protein N-terminal TM region A6J30_05820 PF07549 SecD/SecF GG Motif A6J30_05825 PF02699 Preprotein translocase subunit A6J30_05830 PF01702 Queuine tRNA-ribosyltransferase A6J30_05835 PF02547 Queuosine biosynthesis protein A6J30_05850 PF00571 CBS domain A6J30_05855 PF00463 Isocitrate lyase family A6J30_05860 PF01274 Malate synthase A6J30_05865 PF03466 LysR substrate binding domain A6J30_05865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_05870 PF00578 AhpC/TSA family A6J30_05870 PF10417 C-terminal domain of 1-Cys peroxiredoxin A6J30_05880 PF03932 CutC family A6J30_05885 PF03976 Polyphosphate kinase 2 (PPK2) A6J30_05890 PF01895 PhoU domain A6J30_05895 PF00005 ABC transporter A6J30_05900 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_05905 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_05910 PF17941 Polyphosphate kinase C-terminal domain 1 A6J30_05910 PF13090 Polyphosphate kinase C-terminal domain 2 A6J30_05910 PF13089 Polyphosphate kinase N-terminal domain A6J30_05910 PF02503 Polyphosphate kinase middle domain A6J30_05915 PF02541 Ppx/GppA phosphatase family A6J30_05920 PF12849 PBP superfamily domain A6J30_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_05925 PF11808 Phosphate regulon sensor protein PhoR A6J30_05925 PF00989 PAS fold A6J30_05925 PF00512 His Kinase A (phospho-acceptor) domain A6J30_05930 PF00072 Response regulator receiver domain A6J30_05930 PF00486 Transcriptional regulatory protein, C terminal A6J30_05940 PF04381 Putative exonuclease, RdgC A6J30_05950 PF00037 4Fe-4S binding domain A6J30_05960 PF03411 Penicillin-insensitive murein endopeptidase A6J30_06010 PF07724 AAA domain (Cdc48 subfamily) A6J30_06010 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_06010 PF17871 AAA lid domain A6J30_06010 PF10431 C-terminal, D2-small domain, of ClpB protein A6J30_06010 PF02861 Clp amino terminal domain, pathogenicity island component A6J30_06020 PF01479 S4 domain A6J30_06020 PF00849 RNA pseudouridylate synthase A6J30_06025 PF13525 Outer membrane lipoprotein A6J30_06030 PF01464 Transglycosylase SLT domain A6J30_06030 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_06035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6J30_06040 PF01817 Chorismate mutase type II A6J30_06040 PF00800 Prephenate dehydratase A6J30_06045 PF01931 Protein of unknown function DUF84 A6J30_06050 PF01371 Trp repressor protein A6J30_06055 PF01464 Transglycosylase SLT domain A6J30_06055 PF14718 Soluble lytic murein transglycosylase L domain A6J30_06060 PF00005 ABC transporter A6J30_06060 PF12848 ABC transporter A6J30_06070 PF07238 PilZ domain A6J30_06075 PF01551 Peptidase family M23 A6J30_06075 PF04225 Opacity-associated protein A LysM-like domain A6J30_06080 PF01817 Chorismate mutase type II A6J30_06080 PF02153 Prephenate dehydrogenase A6J30_06085 PF00793 DAHP synthetase I family A6J30_06090 PF00933 Glycosyl hydrolase family 3 N terminal domain A6J30_06095 PF03702 Anhydro-N-acetylmuramic acid kinase A6J30_06100 PF13580 SIS domain A6J30_06115 PF02554 Carbon starvation protein CstA A6J30_06120 PF07694 5TMR of 5TMR-LYT A6J30_06120 PF06580 Histidine kinase A6J30_06125 PF04397 LytTr DNA-binding domain A6J30_06125 PF00072 Response regulator receiver domain A6J30_06130 PF02401 LytB protein A6J30_06135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_06140 PF01252 Signal peptidase (SPase) II A6J30_06145 PF08264 Anticodon-binding domain of tRNA A6J30_06145 PF00133 tRNA synthetases class I (I, L, M and V) A6J30_06145 PF06827 Zinc finger found in FPG and IleRS A6J30_06150 PF01687 Riboflavin kinase A6J30_06150 PF06574 FAD synthetase A6J30_06155 PF03023 Lipid II flippase MurJ A6J30_06160 PF01649 Ribosomal protein S20 A6J30_06170 PF01022 Bacterial regulatory protein, arsR family A6J30_06175 PF03466 LysR substrate binding domain A6J30_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_06180 PF02690 Na+/Pi-cotransporter A6J30_06190 PF00303 Thymidylate synthase A6J30_06195 PF01790 Prolipoprotein diacylglyceryl transferase A6J30_06200 PF01925 Sulfite exporter TauE/SafE A6J30_06205 PF02896 PEP-utilising enzyme, TIM barrel domain A6J30_06205 PF00391 PEP-utilising enzyme, mobile domain A6J30_06205 PF01590 GAF domain A6J30_06205 PF05524 PEP-utilising enzyme, N-terminal A6J30_06210 PF00293 NUDIX domain A6J30_06220 PF02976 DNA mismatch repair enzyme MutH A6J30_06230 PF00248 Aldo/keto reductase family A6J30_06240 PF02954 Bacterial regulatory protein, Fis family A6J30_06240 PF00072 Response regulator receiver domain A6J30_06240 PF00158 Sigma-54 interaction domain A6J30_06245 PF01336 OB-fold nucleic acid binding domain A6J30_06245 PF00152 tRNA synthetases class II (D, K and N) A6J30_06255 PF01368 DHH family A6J30_06255 PF02272 DHHA1 domain A6J30_06255 PF17768 RecJ OB domain A6J30_06260 PF10411 Disulfide bond isomerase protein N-terminus A6J30_06260 PF13098 Thioredoxin-like domain A6J30_06265 PF02899 Phage integrase, N-terminal SAM-like domain A6J30_06265 PF00589 Phage integrase family A6J30_06270 PF00258 Flavodoxin A6J30_06275 PF05525 Branched-chain amino acid transport protein A6J30_06280 PF05175 Methyltransferase small domain A6J30_06285 PF00271 Helicase conserved C-terminal domain A6J30_06285 PF00270 DEAD/DEAH box helicase A6J30_06290 PF03883 Peroxide stress protein YaaA A6J30_06295 PF01235 Sodium:alanine symporter family A6J30_06310 PF03167 Uracil DNA glycosylase superfamily A6J30_06320 PF01261 Xylose isomerase-like TIM barrel A6J30_06325 PF01228 Glycine radical A6J30_06330 PF14821 Threonine synthase N terminus A6J30_06330 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_06335 PF00288 GHMP kinases N terminal domain A6J30_06335 PF08544 GHMP kinases C terminal A6J30_06340 PF00696 Amino acid kinase family A6J30_06340 PF01842 ACT domain A6J30_06340 PF03447 Homoserine dehydrogenase, NAD binding domain A6J30_06340 PF00742 Homoserine dehydrogenase A6J30_06340 PF13840 ACT domain A6J30_06355 PF03737 Aldolase/RraA A6J30_06370 PF00072 Response regulator receiver domain A6J30_06370 PF00486 Transcriptional regulatory protein, C terminal A6J30_06380 PF00072 Response regulator receiver domain A6J30_06380 PF18415 Histidine kinase receptor ArcB trans-membrane domain A6J30_06380 PF00989 PAS fold A6J30_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_06380 PF01627 Hpt domain A6J30_06380 PF00512 His Kinase A (phospho-acceptor) domain A6J30_06385 PF01590 GAF domain A6J30_06385 PF00563 EAL domain A6J30_06385 PF00990 Diguanylate cyclase, GGDEF domain A6J30_06385 PF00360 Phytochrome region A6J30_06390 PF04055 Radical SAM superfamily A6J30_06390 PF16199 Radical_SAM C-terminal domain A6J30_06395 PF01493 GXGXG motif A6J30_06395 PF01645 Conserved region in glutamate synthase A6J30_06395 PF00310 Glutamine amidotransferases class-II A6J30_06395 PF04898 Glutamate synthase central domain A6J30_06400 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_06400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6J30_06405 PF01645 Conserved region in glutamate synthase A6J30_06405 PF04898 Glutamate synthase central domain A6J30_06405 PF01493 GXGXG motif A6J30_06405 PF00310 Glutamine amidotransferases class-II A6J30_06410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6J30_06410 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_06420 PF01048 Phosphorylase superfamily A6J30_06425 PF03186 CobD/Cbib protein A6J30_06425 PF17113 Regulatory signalling modulator protein AmpE A6J30_06430 PF01497 Periplasmic binding protein A6J30_06435 PF03458 UPF0126 domain A6J30_06440 PF03466 LysR substrate binding domain A6J30_06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_06445 PF01925 Sulfite exporter TauE/SafE A6J30_06460 PF02142 MGS-like domain A6J30_06460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6J30_06460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6J30_06465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A6J30_06465 PF00117 Glutamine amidotransferase class-I A6J30_06470 PF05173 Dihydrodipicolinate reductase, C-terminus A6J30_06470 PF01113 Dihydrodipicolinate reductase, N-terminus A6J30_06475 PF00293 NUDIX domain A6J30_06480 PF07516 SecA Wing and Scaffold domain A6J30_06480 PF02810 SEC-C motif A6J30_06480 PF07517 SecA DEAD-like domain A6J30_06480 PF01043 SecA preprotein cross-linking domain A6J30_06490 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A6J30_06495 PF12327 FtsZ family, C-terminal domain A6J30_06495 PF00091 Tubulin/FtsZ family, GTPase domain A6J30_06500 PF02491 SHS2 domain inserted in FTSA A6J30_06505 PF03799 Cell division protein FtsQ A6J30_06505 PF08478 POTRA domain, FtsQ-type A6J30_06510 PF02875 Mur ligase family, glutamate ligase domain A6J30_06510 PF01225 Mur ligase family, catalytic domain A6J30_06510 PF08245 Mur ligase middle domain A6J30_06515 PF03033 Glycosyltransferase family 28 N-terminal domain A6J30_06515 PF04101 Glycosyltransferase family 28 C-terminal domain A6J30_06520 PF01098 Cell cycle protein A6J30_06525 PF08245 Mur ligase middle domain A6J30_06525 PF02875 Mur ligase family, glutamate ligase domain A6J30_06530 PF00953 Glycosyl transferase family 4 A6J30_06530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A6J30_06535 PF01225 Mur ligase family, catalytic domain A6J30_06535 PF08245 Mur ligase middle domain A6J30_06535 PF02875 Mur ligase family, glutamate ligase domain A6J30_06540 PF01225 Mur ligase family, catalytic domain A6J30_06540 PF08245 Mur ligase middle domain A6J30_06540 PF02875 Mur ligase family, glutamate ligase domain A6J30_06545 PF03717 Penicillin-binding Protein dimerisation domain A6J30_06545 PF00905 Penicillin binding protein transpeptidase domain A6J30_06550 PF04999 Cell division protein FtsL A6J30_06555 PF01795 MraW methylase family A6J30_06570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J30_06575 PF04348 LppC putative lipoprotein A6J30_06580 PF02021 Uncharacterised protein family UPF0102 A6J30_06585 PF13580 SIS domain A6J30_06590 PF04972 BON domain A6J30_06595 PF04386 Stringent starvation protein B A6J30_06600 PF00043 Glutathione S-transferase, C-terminal domain A6J30_06600 PF02798 Glutathione S-transferase, N-terminal domain A6J30_06605 PF02167 Cytochrome C1 family A6J30_06610 PF00032 Cytochrome b(C-terminal)/b6/petD A6J30_06610 PF00033 Cytochrome b/b6/petB A6J30_06615 PF00355 Rieske [2Fe-2S] domain A6J30_06615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A6J30_06620 PF00380 Ribosomal protein S9/S16 A6J30_06625 PF00572 Ribosomal protein L13 A6J30_06635 PF03969 AFG1-like ATPase A6J30_06640 PF06295 Protein of unknown function (DUF1043) A6J30_06645 PF00595 PDZ domain A6J30_06650 PF13180 PDZ domain A6J30_06655 PF03989 DNA gyrase C-terminal domain, beta-propeller A6J30_06655 PF00521 DNA gyrase/topoisomerase IV, subunit A A6J30_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_06660 PF00986 DNA gyrase B subunit, carboxyl terminus A6J30_06660 PF00204 DNA gyrase B A6J30_06660 PF01751 Toprim domain A6J30_06665 PF05728 Uncharacterised protein family (UPF0227) A6J30_06670 PF00149 Calcineurin-like phosphoesterase A6J30_06675 PF06853 Protein of unknown function (DUF1249) A6J30_06680 PF00293 NUDIX domain A6J30_06685 PF02321 Outer membrane efflux protein A6J30_06690 PF00294 pfkB family carbohydrate kinase A6J30_06690 PF01467 Cytidylyltransferase-like A6J30_06695 PF03710 Glutamate-ammonia ligase adenylyltransferase A6J30_06695 PF08335 GlnD PII-uridylyltransferase A6J30_06700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_06700 PF00672 HAMP domain A6J30_06710 PF01928 CYTH domain A6J30_06715 PF01865 Protein of unknown function DUF47 A6J30_06720 PF01384 Phosphate transporter family A6J30_06725 PF08239 Bacterial SH3 domain A6J30_06735 PF01471 Putative peptidoglycan binding domain A6J30_06735 PF13401 AAA domain A6J30_06740 PF12627 Probable RNA and SrmB- binding site of polymerase A A6J30_06740 PF01743 Poly A polymerase head domain A6J30_06740 PF01966 HD domain A6J30_06745 PF02673 Bacitracin resistance protein BacA A6J30_06750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6J30_06755 PF02152 Dihydroneopterin aldolase A6J30_06760 PF02660 Glycerol-3-phosphate acyltransferase A6J30_06765 PF12697 Alpha/beta hydrolase family A6J30_06770 PF00814 Glycoprotease family A6J30_06775 PF01165 Ribosomal protein S21 A6J30_06780 PF09424 Yqey-like protein A6J30_06785 PF01807 CHC2 zinc finger A6J30_06785 PF10410 DnaB-helicase binding domain of primase A6J30_06785 PF08278 DNA primase DnaG DnaB-binding A6J30_06785 PF08275 DNA primase catalytic core, N-terminal domain A6J30_06790 PF04546 Sigma-70, non-essential region A6J30_06790 PF04542 Sigma-70 region 2 A6J30_06790 PF03979 Sigma-70 factor, region 1.1 A6J30_06790 PF04539 Sigma-70 region 3 A6J30_06790 PF04545 Sigma-70, region 4 A6J30_06790 PF00140 Sigma-70 factor, region 1.2 A6J30_06805 PF13657 HipA N-terminal domain A6J30_06805 PF07804 HipA-like C-terminal domain A6J30_06835 PF08463 EcoEI R protein C-terminal A6J30_06835 PF04851 Type III restriction enzyme, res subunit A6J30_06835 PF00271 Helicase conserved C-terminal domain A6J30_06835 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) A6J30_06840 PF01555 DNA methylase A6J30_06875 PF12161 HsdM N-terminal domain A6J30_06875 PF02384 N-6 DNA Methylase A6J30_06880 PF01420 Type I restriction modification DNA specificity domain A6J30_06915 PF03180 NLPA lipoprotein A6J30_06925 PF12833 Helix-turn-helix domain A6J30_06960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_06960 PF02378 Phosphotransferase system, EIIC A6J30_06960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_06965 PF01232 Mannitol dehydrogenase Rossmann domain A6J30_06965 PF08125 Mannitol dehydrogenase C-terminal domain A6J30_06970 PF05068 Mannitol repressor A6J30_06975 PF02954 Bacterial regulatory protein, Fis family A6J30_06975 PF00158 Sigma-54 interaction domain A6J30_06975 PF00989 PAS fold A6J30_06980 PF00391 PEP-utilising enzyme, mobile domain A6J30_06980 PF05524 PEP-utilising enzyme, N-terminal A6J30_06980 PF02896 PEP-utilising enzyme, TIM barrel domain A6J30_06985 PF02734 DAK2 domain A6J30_06990 PF02733 Dak1 domain A6J30_06995 PF00465 Iron-containing alcohol dehydrogenase A6J30_07000 PF00512 His Kinase A (phospho-acceptor) domain A6J30_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_07000 PF00672 HAMP domain A6J30_07005 PF00072 Response regulator receiver domain A6J30_07005 PF00486 Transcriptional regulatory protein, C terminal A6J30_07015 PF01380 SIS domain A6J30_07020 PF08220 DeoR-like helix-turn-helix domain A6J30_07020 PF00455 DeoR C terminal sensor domain A6J30_07025 PF00224 Pyruvate kinase, barrel domain A6J30_07025 PF02887 Pyruvate kinase, alpha/beta domain A6J30_07035 PF00990 Diguanylate cyclase, GGDEF domain A6J30_07035 PF07694 5TMR of 5TMR-LYT A6J30_07040 PF10369 Small subunit of acetolactate synthase A6J30_07045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J30_07045 PF00205 Thiamine pyrophosphate enzyme, central domain A6J30_07045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J30_07050 PF00501 AMP-binding enzyme A6J30_07055 PF03466 LysR substrate binding domain A6J30_07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_07075 PF00682 HMGL-like A6J30_07075 PF08502 LeuA allosteric (dimerisation) domain A6J30_07080 PF00180 Isocitrate/isopropylmalate dehydrogenase A6J30_07085 PF00330 Aconitase family (aconitate hydratase) A6J30_07090 PF00694 Aconitase C-terminal domain A6J30_07100 PF00226 DnaJ domain A6J30_07100 PF05099 Tellurite resistance protein TerB A6J30_07105 PF04453 LPS transport system D A6J30_07105 PF03968 OstA-like protein A6J30_07110 PF09312 SurA N-terminal domain A6J30_07115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6J30_07120 PF00398 Ribosomal RNA adenine dimethylase A6J30_07125 PF04379 ApaG domain A6J30_07130 PF00149 Calcineurin-like phosphoesterase A6J30_07135 PF00186 Dihydrofolate reductase A6J30_07140 PF12821 Threonine/Serine exporter, ThrE A6J30_07145 PF06738 Putative threonine/serine exporter A6J30_07150 PF01018 GTP1/OBG A6J30_07150 PF01926 50S ribosome-binding GTPase A6J30_07155 PF01016 Ribosomal L27 protein A6J30_07160 PF00829 Ribosomal prokaryotic L21 protein A6J30_07165 PF00348 Polyprenyl synthetase A6J30_07175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A6J30_07175 PF00056 lactate/malate dehydrogenase, NAD binding domain A6J30_07180 PF01316 Arginine repressor, DNA binding domain A6J30_07180 PF02863 Arginine repressor, C-terminal domain A6J30_07190 PF16868 NMT1-like family A6J30_07210 PF00005 ABC transporter A6J30_07215 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_07225 PF02441 Flavoprotein A6J30_07230 PF02875 Mur ligase family, glutamate ligase domain A6J30_07230 PF01225 Mur ligase family, catalytic domain A6J30_07230 PF08245 Mur ligase middle domain A6J30_07235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A6J30_07240 PF00719 Inorganic pyrophosphatase A6J30_07250 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like A6J30_07255 PF04357 TamB, inner membrane protein subunit of TAM complex A6J30_07260 PF01103 Surface antigen A6J30_07260 PF17243 POTRA domain TamA domain 1 A6J30_07265 PF01625 Peptide methionine sulfoxide reductase A6J30_07270 PF06526 Protein of unknown function (DUF1107) A6J30_07275 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A6J30_07280 PF10795 Protein of unknown function (DUF2607) A6J30_07290 PF00005 ABC transporter A6J30_07315 PF03600 Citrate transporter A6J30_07315 PF02080 TrkA-C domain A6J30_07320 PF00009 Elongation factor Tu GTP binding domain A6J30_07325 PF01507 Phosphoadenosine phosphosulfate reductase family A6J30_07330 PF14824 Sirohaem biosynthesis protein central A6J30_07330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J30_07330 PF10414 Sirohaem synthase dimerisation region A6J30_07335 PF00149 Calcineurin-like phosphoesterase A6J30_07335 PF02872 5'-nucleotidase, C-terminal domain A6J30_07345 PF03880 DbpA RNA binding domain A6J30_07345 PF00270 DEAD/DEAH box helicase A6J30_07345 PF00271 Helicase conserved C-terminal domain A6J30_07350 PF13673 Acetyltransferase (GNAT) domain A6J30_07360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_07360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J30_07370 PF01196 Ribosomal protein L17 A6J30_07375 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A6J30_07375 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A6J30_07375 PF01000 RNA polymerase Rpb3/RpoA insert domain A6J30_07380 PF01479 S4 domain A6J30_07380 PF00163 Ribosomal protein S4/S9 N-terminal domain A6J30_07385 PF00411 Ribosomal protein S11 A6J30_07390 PF00416 Ribosomal protein S13/S18 A6J30_07395 PF00444 Ribosomal protein L36 A6J30_07400 PF00344 SecY translocase A6J30_07405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A6J30_07410 PF00327 Ribosomal protein L30p/L7e A6J30_07415 PF03719 Ribosomal protein S5, C-terminal domain A6J30_07415 PF00333 Ribosomal protein S5, N-terminal domain A6J30_07420 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A6J30_07425 PF00347 Ribosomal protein L6 A6J30_07430 PF00410 Ribosomal protein S8 A6J30_07435 PF00253 Ribosomal protein S14p/S29e A6J30_07440 PF00281 Ribosomal protein L5 A6J30_07440 PF00673 ribosomal L5P family C-terminus A6J30_07445 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A6J30_07445 PF00467 KOW motif A6J30_07450 PF00238 Ribosomal protein L14p/L23e A6J30_07455 PF00366 Ribosomal protein S17 A6J30_07460 PF00831 Ribosomal L29 protein A6J30_07465 PF00252 Ribosomal protein L16p/L10e A6J30_07470 PF00189 Ribosomal protein S3, C-terminal domain A6J30_07470 PF07650 KH domain A6J30_07475 PF00237 Ribosomal protein L22p/L17e A6J30_07480 PF00203 Ribosomal protein S19 A6J30_07485 PF00181 Ribosomal Proteins L2, RNA binding domain A6J30_07485 PF03947 Ribosomal Proteins L2, C-terminal domain A6J30_07490 PF00276 Ribosomal protein L23 A6J30_07495 PF00573 Ribosomal protein L4/L1 family A6J30_07500 PF00297 Ribosomal protein L3 A6J30_07505 PF00338 Ribosomal protein S10p/S20e A6J30_07510 PF01197 Ribosomal protein L31 A6J30_07515 PF17764 3′ DNA-binding domain (3′BD) A6J30_07515 PF18074 Primosomal protein N C-terminal domain A6J30_07515 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A6J30_07515 PF00271 Helicase conserved C-terminal domain A6J30_07515 PF00270 DEAD/DEAH box helicase A6J30_07520 PF00356 Bacterial regulatory proteins, lacI family A6J30_07530 PF00227 Proteasome subunit A6J30_07535 PF07724 AAA domain (Cdc48 subfamily) A6J30_07535 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_07540 PF01040 UbiA prenyltransferase family A6J30_07545 PF03737 Aldolase/RraA A6J30_07550 PF06005 Cell division protein ZapB A6J30_07555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6J30_07560 PF08220 DeoR-like helix-turn-helix domain A6J30_07560 PF00455 DeoR C terminal sensor domain A6J30_07580 PF00121 Triosephosphate isomerase A6J30_07585 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A6J30_07585 PF00753 Metallo-beta-lactamase superfamily A6J30_07585 PF10996 Beta-Casp domain A6J30_07590 PF00483 Nucleotidyl transferase A6J30_07595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6J30_07595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6J30_07595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6J30_07605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6J30_07620 PF02397 Bacterial sugar transferase A6J30_07630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A6J30_07660 PF00483 Nucleotidyl transferase A6J30_07665 PF16363 GDP-mannose 4,6 dehydratase A6J30_07700 PF06082 Exopolysaccharide biosynthesis protein YbjH A6J30_07705 PF01370 NAD dependent epimerase/dehydratase family A6J30_07710 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J30_07715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6J30_07720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A6J30_07745 PF00795 Carbon-nitrogen hydrolase A6J30_07750 PF00202 Aminotransferase class-III A6J30_07760 PF13472 GDSL-like Lipase/Acylhydrolase family A6J30_07760 PF02348 Cytidylyltransferase A6J30_07765 PF00483 Nucleotidyl transferase A6J30_07775 PF08666 SAF domain A6J30_07775 PF03102 NeuB family A6J30_07780 PF02350 UDP-N-acetylglucosamine 2-epimerase A6J30_07785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6J30_07790 PF02719 Polysaccharide biosynthesis protein A6J30_07800 PF01219 Prokaryotic diacylglycerol kinase A6J30_07805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6J30_07810 PF00535 Glycosyl transferase family 2 A6J30_07815 PF00535 Glycosyl transferase family 2 A6J30_07820 PF05686 Glycosyl transferase family 90 A6J30_07825 PF01467 Cytidylyltransferase-like A6J30_07830 PF06827 Zinc finger found in FPG and IleRS A6J30_07830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A6J30_07830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A6J30_07840 PF00884 Sulfatase A6J30_07845 PF00471 Ribosomal protein L33 A6J30_07850 PF00830 Ribosomal L28 family A6J30_07855 PF04002 RadC-like JAB domain A6J30_07860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_07860 PF00672 HAMP domain A6J30_07860 PF17200 Single Cache domain 2 A6J30_07870 PF02441 Flavoprotein A6J30_07870 PF04127 DNA / pantothenate metabolism flavoprotein A6J30_07875 PF00440 Bacterial regulatory proteins, tetR family A6J30_07880 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J30_07885 PF00156 Phosphoribosyl transferase domain A6J30_07890 PF03725 3' exoribonuclease family, domain 2 A6J30_07890 PF01138 3' exoribonuclease family, domain 1 A6J30_07895 PF03755 YicC-like family, N-terminal region A6J30_07895 PF08340 Domain of unknown function (DUF1732) A6J30_07905 PF00005 ABC transporter A6J30_07905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_07910 PF00005 ABC transporter A6J30_07910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_07915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_07920 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_07920 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_07925 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_07935 PF00593 TonB dependent receptor A6J30_07935 PF07715 TonB-dependent Receptor Plug Domain A6J30_07950 PF01618 MotA/TolQ/ExbB proton channel family A6J30_07955 PF02472 Biopolymer transport protein ExbD/TolR A6J30_07970 PF00625 Guanylate kinase A6J30_07975 PF01192 RNA polymerase Rpb6 A6J30_07980 PF02824 TGS domain A6J30_07980 PF04607 Region found in RelA / SpoT proteins A6J30_07980 PF13291 ACT domain A6J30_07985 PF12105 SpoU, rRNA methylase, C-terminal A6J30_07985 PF00588 SpoU rRNA Methylase family A6J30_07990 PF00271 Helicase conserved C-terminal domain A6J30_07990 PF00270 DEAD/DEAH box helicase A6J30_07990 PF17191 RecG wedge domain A6J30_08000 PF00860 Permease family A6J30_08005 PF00672 HAMP domain A6J30_08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_08005 PF00512 His Kinase A (phospho-acceptor) domain A6J30_08010 PF00486 Transcriptional regulatory protein, C terminal A6J30_08010 PF00072 Response regulator receiver domain A6J30_08020 PF03449 Transcription elongation factor, N-terminal A6J30_08020 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J30_08030 PF00575 S1 RNA binding domain A6J30_08030 PF09371 Tex-like protein N-terminal domain A6J30_08030 PF17674 HHH domain A6J30_08030 PF16921 Tex protein YqgF-like domain A6J30_08040 PF00561 alpha/beta hydrolase fold A6J30_08045 PF00156 Phosphoribosyl transferase domain A6J30_08050 PF01106 NifU-like domain A6J30_08050 PF01521 Iron-sulphur cluster biosynthesis A6J30_08055 PF00293 NUDIX domain A6J30_08060 PF00459 Inositol monophosphatase family A6J30_08065 PF01203 Type II secretion system (T2SS), protein N A6J30_08070 PF04612 Type II secretion system (T2SS), protein M A6J30_08075 PF12693 GspL periplasmic domain A6J30_08075 PF05134 Type II secretion system (T2SS), protein L A6J30_08080 PF03934 Type II secretion system (T2SS), protein K A6J30_08085 PF11612 Type II secretion system (T2SS), protein J A6J30_08085 PF07963 Prokaryotic N-terminal methylation motif A6J30_08090 PF02501 Type II secretion system (T2SS), protein I A6J30_08090 PF07963 Prokaryotic N-terminal methylation motif A6J30_08095 PF12019 Type II transport protein GspH A6J30_08100 PF08334 Type II secretion system (T2SS), protein G A6J30_08100 PF07963 Prokaryotic N-terminal methylation motif A6J30_08105 PF00482 Type II secretion system (T2SS), protein F A6J30_08110 PF00437 Type II/IV secretion system protein A6J30_08115 PF03958 Bacterial type II/III secretion system short domain A6J30_08115 PF00263 Bacterial type II and III secretion system protein A6J30_08120 PF11356 Type II secretion system protein C A6J30_08125 PF01479 S4 domain A6J30_08130 PF01430 Hsp33 protein A6J30_08135 PF01293 Phosphoenolpyruvate carboxykinase A6J30_08145 PF00583 Acetyltransferase (GNAT) family A6J30_08145 PF09500 Putative thioesterase (yiiD_Cterm) A6J30_08150 PF02580 D-Tyr-tRNA(Tyr) deacylase A6J30_08155 PF03631 Virulence factor BrkB A6J30_08180 PF00120 Glutamine synthetase, catalytic domain A6J30_08180 PF03951 Glutamine synthetase, beta-Grasp domain A6J30_08190 PF00512 His Kinase A (phospho-acceptor) domain A6J30_08190 PF00989 PAS fold A6J30_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_08195 PF02954 Bacterial regulatory protein, Fis family A6J30_08195 PF00158 Sigma-54 interaction domain A6J30_08195 PF00072 Response regulator receiver domain A6J30_08200 PF03707 Bacterial signalling protein N terminal repeat A6J30_08200 PF00990 Diguanylate cyclase, GGDEF domain A6J30_08200 PF00563 EAL domain A6J30_08205 PF00962 Adenosine/AMP deaminase A6J30_08210 PF04055 Radical SAM superfamily A6J30_08210 PF06969 HemN C-terminal domain A6J30_08215 PF10675 Protein of unknown function (DUF2489) A6J30_08220 PF04220 Der GTPase activator (YihI) A6J30_08235 PF00034 Cytochrome c A6J30_08240 PF01926 50S ribosome-binding GTPase A6J30_08250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6J30_08250 PF00476 DNA polymerase family A A6J30_08250 PF01612 3'-5' exonuclease A6J30_08250 PF01367 5'-3' exonuclease, C-terminal SAM fold A6J30_08265 PF00490 Delta-aminolevulinic acid dehydratase A6J30_08275 PF01026 TatD related DNase A6J30_08285 PF00902 Sec-independent protein translocase protein (TatC) A6J30_08290 PF02416 mttA/Hcf106 family A6J30_08295 PF02416 mttA/Hcf106 family A6J30_08300 PF03109 ABC1 family A6J30_08305 PF02036 SCP-2 sterol transfer family A6J30_08310 PF01209 ubiE/COQ5 methyltransferase family A6J30_08315 PF02646 RmuC family A6J30_08325 PF00563 EAL domain A6J30_08325 PF00990 Diguanylate cyclase, GGDEF domain A6J30_08325 PF03707 Bacterial signalling protein N terminal repeat A6J30_08330 PF01594 AI-2E family transporter A6J30_08360 PF00781 Diacylglycerol kinase catalytic domain A6J30_08385 PF00158 Sigma-54 interaction domain A6J30_08385 PF02954 Bacterial regulatory protein, Fis family A6J30_08385 PF01590 GAF domain A6J30_08395 PF10625 Universal stress protein B (UspB) A6J30_08400 PF00210 Ferritin-like domain A6J30_08405 PF00582 Universal stress protein family A6J30_08410 PF00892 EamA-like transporter family A6J30_08420 PF04445 Putative SAM-dependent methyltransferase A6J30_08425 PF00563 EAL domain A6J30_08425 PF00990 Diguanylate cyclase, GGDEF domain A6J30_08425 PF08448 PAS fold A6J30_08430 PF01037 Lrp/AsnC ligand binding domain A6J30_08435 PF01432 Peptidase family M3 A6J30_08440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A6J30_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_08445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J30_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_08450 PF03466 LysR substrate binding domain A6J30_08455 PF01048 Phosphorylase superfamily A6J30_08460 PF01081 KDPG and KHG aldolase A6J30_08465 PF02447 GntP family permease A6J30_08470 PF01202 Shikimate kinase A6J30_08475 PF00920 Dehydratase family A6J30_08480 PF00893 Small Multidrug Resistance protein A6J30_08485 PF00893 Small Multidrug Resistance protein A6J30_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_08490 PF03466 LysR substrate binding domain A6J30_08495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J30_08495 PF00356 Bacterial regulatory proteins, lacI family A6J30_08500 PF00069 Protein kinase domain A6J30_08530 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_08530 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_08540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_08545 PF00005 ABC transporter A6J30_08545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_08560 PF13419 Haloacid dehalogenase-like hydrolase A6J30_08595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6J30_08600 PF13361 UvrD-like helicase C-terminal domain A6J30_08600 PF00580 UvrD/REP helicase N-terminal domain A6J30_08605 PF16295 Tetracyclin repressor-like, C-terminal domain A6J30_08605 PF00440 Bacterial regulatory proteins, tetR family A6J30_08610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_08615 PF00873 AcrB/AcrD/AcrF family A6J30_08625 PF04380 Membrane fusogenic activity A6J30_08630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A6J30_08630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A6J30_08635 PF03466 LysR substrate binding domain A6J30_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_08680 PF12724 Flavodoxin domain A6J30_08685 PF02386 Cation transport protein A6J30_08690 PF09186 Domain of unknown function (DUF1949) A6J30_08690 PF01205 Uncharacterized protein family UPF0029 A6J30_08695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6J30_08695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6J30_08695 PF00378 Enoyl-CoA hydratase/isomerase A6J30_08700 PF02803 Thiolase, C-terminal domain A6J30_08700 PF00108 Thiolase, N-terminal domain A6J30_08705 PF00107 Zinc-binding dehydrogenase A6J30_08705 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_08710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_08710 PF03466 LysR substrate binding domain A6J30_08720 PF01206 Sulfurtransferase TusA A6J30_08730 PF01169 Uncharacterized protein family UPF0016 A6J30_08735 PF02091 Glycyl-tRNA synthetase alpha subunit A6J30_08740 PF05746 DALR anticodon binding domain A6J30_08740 PF02092 Glycyl-tRNA synthetase beta subunit A6J30_08745 PF00128 Alpha amylase, catalytic domain A6J30_08750 PF00155 Aminotransferase class I and II A6J30_08755 PF00011 Hsp20/alpha crystallin family A6J30_08770 PF00204 DNA gyrase B A6J30_08770 PF18053 DNA gyrase B subunit insert domain A6J30_08770 PF00986 DNA gyrase B subunit, carboxyl terminus A6J30_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_08770 PF01751 Toprim domain A6J30_08775 PF02463 RecF/RecN/SMC N terminal domain A6J30_08780 PF02768 DNA polymerase III beta subunit, C-terminal domain A6J30_08780 PF00712 DNA polymerase III beta subunit, N-terminal domain A6J30_08780 PF02767 DNA polymerase III beta subunit, central domain A6J30_08785 PF08299 Bacterial dnaA protein helix-turn-helix A6J30_08785 PF11638 DnaA N-terminal domain A6J30_08785 PF00308 Bacterial dnaA protein A6J30_08795 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_08800 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_08805 PF00005 ABC transporter A6J30_08810 PF00468 Ribosomal protein L34 A6J30_08815 PF00825 Ribonuclease P A6J30_08820 PF01809 Putative membrane protein insertion efficiency factor A6J30_08825 PF02096 60Kd inner membrane protein A6J30_08825 PF14849 YidC periplasmic domain A6J30_08830 PF12631 MnmE helical domain A6J30_08830 PF01926 50S ribosome-binding GTPase A6J30_08830 PF10396 GTP-binding protein TrmE N-terminus A6J30_08835 PF00258 Flavodoxin A6J30_08840 PF13932 GidA associated domain A6J30_08840 PF01134 Glucose inhibited division protein A A6J30_08845 PF02527 rRNA small subunit methyltransferase G A6J30_08850 PF13614 AAA domain A6J30_08855 PF17762 HTH domain found in ParB protein A6J30_08855 PF02195 ParB-like nuclease domain A6J30_08860 PF03899 ATP synthase I chain A6J30_08865 PF00119 ATP synthase A chain A6J30_08870 PF00137 ATP synthase subunit C A6J30_08875 PF00430 ATP synthase B/B' CF(0) A6J30_08880 PF00213 ATP synthase delta (OSCP) subunit A6J30_08885 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J30_08885 PF00306 ATP synthase alpha/beta chain, C terminal domain A6J30_08885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_08890 PF00231 ATP synthase A6J30_08895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_08895 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J30_08900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6J30_08900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A6J30_08905 PF12804 MobA-like NTP transferase domain A6J30_08905 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_08910 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_08915 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_08920 PF07690 Major Facilitator Superfamily A6J30_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_08925 PF03466 LysR substrate binding domain A6J30_08930 PF00585 C-terminal regulatory domain of Threonine dehydratase A6J30_08930 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_08935 PF00920 Dehydratase family A6J30_08940 PF01063 Amino-transferase class IV A6J30_08950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J30_08950 PF00205 Thiamine pyrophosphate enzyme, central domain A6J30_08950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J30_08955 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6J30_08955 PF01078 Magnesium chelatase, subunit ChlI A6J30_08965 PF01553 Acyltransferase A6J30_08970 PF01323 DSBA-like thioredoxin domain A6J30_08975 PF01636 Phosphotransferase enzyme family A6J30_08980 PF13746 4Fe-4S dicluster domain A6J30_08980 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A6J30_08980 PF12801 4Fe-4S binding domain A6J30_08985 PF06288 Protein of unknown function (DUF1040) A6J30_08995 PF07070 SpoOM protein A6J30_09000 PF03006 Haemolysin-III related A6J30_09010 PF02386 Cation transport protein A6J30_09015 PF02254 TrkA-N domain A6J30_09015 PF02080 TrkA-C domain A6J30_09020 PF01029 NusB family A6J30_09020 PF01189 16S rRNA methyltransferase RsmB/F A6J30_09025 PF02911 Formyl transferase, C-terminal domain A6J30_09025 PF00551 Formyl transferase A6J30_09030 PF01327 Polypeptide deformylase A6J30_09040 PF02481 DNA recombination-mediator protein A A6J30_09040 PF17782 DprA winged helix domain A6J30_09045 PF04361 Protein of unknown function (DUF494) A6J30_09050 PF01396 Topoisomerase DNA binding C4 zinc finger A6J30_09055 PF02222 ATP-grasp domain A6J30_09055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A6J30_09060 PF00731 AIR carboxylase A6J30_09065 PF01300 Telomere recombination A6J30_09070 PF01218 Coproporphyrinogen III oxidase A6J30_09075 PF08501 Shikimate dehydrogenase substrate binding domain A6J30_09075 PF01488 Shikimate / quinate 5-dehydrogenase A6J30_09075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A6J30_09080 PF07369 Protein of unknown function (DUF1488) A6J30_09085 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_09150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A6J30_09155 PF01964 Radical SAM ThiC family A6J30_09155 PF13667 ThiC-associated domain A6J30_09160 PF02581 Thiamine monophosphate synthase A6J30_09165 PF00899 ThiF family A6J30_09170 PF02597 ThiS family A6J30_09175 PF05690 Thiazole biosynthesis protein ThiG A6J30_09180 PF04055 Radical SAM superfamily A6J30_09180 PF06968 Biotin and Thiamin Synthesis associated domain A6J30_09185 PF01321 Creatinase/Prolidase N-terminal domain A6J30_09185 PF00557 Metallopeptidase family M24 A6J30_09185 PF00557 Metallopeptidase family M24 A6J30_09185 PF01321 Creatinase/Prolidase N-terminal domain A6J30_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_09190 PF03466 LysR substrate binding domain A6J30_09195 PF07690 Major Facilitator Superfamily A6J30_09215 PF05114 Protein of unknown function (DUF692) A6J30_09225 PF13361 UvrD-like helicase C-terminal domain A6J30_09225 PF00580 UvrD/REP helicase N-terminal domain A6J30_09240 PF01810 LysE type translocator A6J30_09250 PF00892 EamA-like transporter family A6J30_09255 PF16124 RecQ zinc-binding A6J30_09255 PF09382 RQC domain A6J30_09255 PF00270 DEAD/DEAH box helicase A6J30_09255 PF00271 Helicase conserved C-terminal domain A6J30_09255 PF00570 HRDC domain A6J30_09265 PF02592 Putative vitamin uptake transporter A6J30_09270 PF02541 Ppx/GppA phosphatase family A6J30_09275 PF00271 Helicase conserved C-terminal domain A6J30_09275 PF00270 DEAD/DEAH box helicase A6J30_09280 PF00085 Thioredoxin A6J30_09285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_09285 PF07497 Rho termination factor, RNA-binding domain A6J30_09285 PF07498 Rho termination factor, N-terminal domain A6J30_09295 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A6J30_09300 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_09305 PF00175 Oxidoreductase NAD-binding domain A6J30_09355 PF07219 HemY protein N-terminus A6J30_09360 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase A6J30_09365 PF02602 Uroporphyrinogen-III synthase HemD A6J30_09370 PF03900 Porphobilinogen deaminase, C-terminal domain A6J30_09370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A6J30_09375 PF01295 Adenylate cyclase, class-I A6J30_09375 PF12633 Adenylate cyclase NT domain A6J30_09380 PF01491 Frataxin-like domain A6J30_09390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6J30_09390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6J30_09395 PF01678 Diaminopimelate epimerase A6J30_09405 PF00589 Phage integrase family A6J30_09405 PF02899 Phage integrase, N-terminal SAM-like domain A6J30_09410 PF13419 Haloacid dehalogenase-like hydrolase A6J30_09415 PF08495 FIST N domain A6J30_09415 PF00990 Diguanylate cyclase, GGDEF domain A6J30_09415 PF10442 FIST C domain A6J30_09415 PF00563 EAL domain A6J30_09440 PF12146 Serine aminopeptidase, S33 A6J30_09445 PF01810 LysE type translocator A6J30_09450 PF08668 HDOD domain A6J30_09450 PF00563 EAL domain A6J30_09455 PF01022 Bacterial regulatory protein, arsR family A6J30_09460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J30_09460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J30_09515 PF01914 MarC family integral membrane protein A6J30_09530 PF02881 SRP54-type protein, helical bundle domain A6J30_09530 PF00448 SRP54-type protein, GTPase domain A6J30_09535 PF00005 ABC transporter A6J30_09540 PF18075 FtsX extracellular domain A6J30_09545 PF00140 Sigma-70 factor, region 1.2 A6J30_09545 PF04542 Sigma-70 region 2 A6J30_09545 PF04545 Sigma-70, region 4 A6J30_09555 PF00581 Rhodanese-like domain A6J30_09560 PF01694 Rhomboid family A6J30_09560 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease A6J30_09565 PF03748 Flagellar basal body-associated protein FliL A6J30_09570 PF04345 Chorismate lyase A6J30_09575 PF01040 UbiA prenyltransferase family A6J30_09580 PF01553 Acyltransferase A6J30_09585 PF01726 LexA DNA binding domain A6J30_09585 PF00717 Peptidase S24-like A6J30_09590 PF04072 Leucine carboxyl methyltransferase A6J30_09595 PF01554 MatE A6J30_09600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J30_09600 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_09605 PF00440 Bacterial regulatory proteins, tetR family A6J30_09615 PF05958 tRNA (Uracil-5-)-methyltransferase A6J30_09620 PF07715 TonB-dependent Receptor Plug Domain A6J30_09620 PF00593 TonB dependent receptor A6J30_09630 PF01177 Asp/Glu/Hydantoin racemase A6J30_09690 PF13091 PLD-like domain A6J30_09700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A6J30_09700 PF01565 FAD binding domain A6J30_09705 PF02237 Biotin protein ligase C terminal domain A6J30_09705 PF03099 Biotin/lipoate A/B protein ligase family A6J30_09705 PF08279 HTH domain A6J30_09710 PF00485 Phosphoribulokinase / Uridine kinase family A6J30_09735 PF00009 Elongation factor Tu GTP binding domain A6J30_09735 PF03144 Elongation factor Tu domain 2 A6J30_09735 PF03143 Elongation factor Tu C-terminal domain A6J30_09745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A6J30_09750 PF02357 Transcription termination factor nusG A6J30_09750 PF00467 KOW motif A6J30_09755 PF03946 Ribosomal protein L11, N-terminal domain A6J30_09755 PF00298 Ribosomal protein L11, RNA binding domain A6J30_09760 PF00687 Ribosomal protein L1p/L10e family A6J30_09765 PF00466 Ribosomal protein L10 A6J30_09770 PF16320 Ribosomal protein L7/L12 dimerisation domain A6J30_09770 PF00542 Ribosomal protein L7/L12 C-terminal domain A6J30_09775 PF00562 RNA polymerase Rpb2, domain 6 A6J30_09775 PF10385 RNA polymerase beta subunit external 1 domain A6J30_09775 PF04563 RNA polymerase beta subunit A6J30_09775 PF04565 RNA polymerase Rpb2, domain 3 A6J30_09775 PF04561 RNA polymerase Rpb2, domain 2 A6J30_09775 PF04560 RNA polymerase Rpb2, domain 7 A6J30_09780 PF04983 RNA polymerase Rpb1, domain 3 A6J30_09780 PF04997 RNA polymerase Rpb1, domain 1 A6J30_09780 PF00623 RNA polymerase Rpb1, domain 2 A6J30_09780 PF05000 RNA polymerase Rpb1, domain 4 A6J30_09780 PF04998 RNA polymerase Rpb1, domain 5 A6J30_09785 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A6J30_09790 PF09297 NADH pyrophosphatase zinc ribbon domain A6J30_09790 PF00293 NUDIX domain A6J30_09805 PF01208 Uroporphyrinogen decarboxylase (URO-D) A6J30_09810 PF03167 Uracil DNA glycosylase superfamily A6J30_09815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J30_09820 PF04222 Protein of unknown function (DUF416) A6J30_09825 PF01595 Cyclin M transmembrane N-terminal domain A6J30_09825 PF00571 CBS domain A6J30_09830 PF00216 Bacterial DNA-binding protein A6J30_09890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A6J30_09890 PF02843 Phosphoribosylglycinamide synthetase, C domain A6J30_09890 PF02844 Phosphoribosylglycinamide synthetase, N domain A6J30_09895 PF02142 MGS-like domain A6J30_09895 PF01808 AICARFT/IMPCHase bienzyme A6J30_09905 PF13411 MerR HTH family regulatory protein A6J30_09910 PF18500 CadC C-terminal domain 1 A6J30_09910 PF00486 Transcriptional regulatory protein, C terminal A6J30_09920 PF13520 Amino acid permease A6J30_09925 PF01276 Orn/Lys/Arg decarboxylase, major domain A6J30_09925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A6J30_09925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A6J30_10005 PF00990 Diguanylate cyclase, GGDEF domain A6J30_10005 PF05230 MASE2 domain A6J30_10010 PF12848 ABC transporter A6J30_10010 PF00005 ABC transporter A6J30_10015 PF07690 Major Facilitator Superfamily A6J30_10020 PF02954 Bacterial regulatory protein, Fis family A6J30_10025 PF01207 Dihydrouridine synthase (Dus) A6J30_10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6J30_10035 PF00289 Biotin carboxylase, N-terminal domain A6J30_10035 PF02785 Biotin carboxylase C-terminal domain A6J30_10040 PF00364 Biotin-requiring enzyme A6J30_10045 PF01220 Dehydroquinase class II A6J30_10050 PF16177 Acetyl-coenzyme A synthetase N-terminus A6J30_10050 PF00501 AMP-binding enzyme A6J30_10050 PF13193 AMP-binding enzyme C-terminal domain A6J30_10065 PF12832 MFS_1 like family A6J30_10070 PF00512 His Kinase A (phospho-acceptor) domain A6J30_10070 PF09308 LuxQ, periplasmic A6J30_10070 PF00072 Response regulator receiver domain A6J30_10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_10075 PF10415 Fumarase C C-terminus A6J30_10075 PF00206 Lyase A6J30_10090 PF00474 Sodium:solute symporter family A6J30_10100 PF03471 Transporter associated domain A6J30_10100 PF00999 Sodium/hydrogen exchanger family A6J30_10100 PF02080 TrkA-C domain A6J30_10105 PF00196 Bacterial regulatory proteins, luxR family A6J30_10105 PF00072 Response regulator receiver domain A6J30_10110 PF02683 Cytochrome C biogenesis protein transmembrane region A6J30_10110 PF11412 Disulphide bond corrector protein DsbC A6J30_10115 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6J30_10120 PF00206 Lyase A6J30_10120 PF10415 Fumarase C C-terminus A6J30_10125 PF04186 FxsA cytoplasmic membrane protein A6J30_10130 PF00588 SpoU rRNA Methylase family A6J30_10135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6J30_10135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6J30_10140 PF16527 Two-component sensor protein CpxA, periplasmic domain A6J30_10140 PF00512 His Kinase A (phospho-acceptor) domain A6J30_10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_10140 PF00672 HAMP domain A6J30_10145 PF00486 Transcriptional regulatory protein, C terminal A6J30_10145 PF00072 Response regulator receiver domain A6J30_10150 PF07813 LTXXQ motif family protein A6J30_10155 PF16916 Dimerisation domain of Zinc Transporter A6J30_10155 PF01545 Cation efflux family A6J30_10160 PF00365 Phosphofructokinase A6J30_10165 PF01554 MatE A6J30_10175 PF00166 Chaperonin 10 Kd subunit A6J30_10180 PF00118 TCP-1/cpn60 chaperonin family A6J30_10190 PF02308 MgtC family A6J30_10200 PF00842 Alanine racemase, C-terminal domain A6J30_10200 PF01168 Alanine racemase, N-terminal domain A6J30_10205 PF04055 Radical SAM superfamily A6J30_10210 PF08207 Elongation factor P (EF-P) KOW-like domain A6J30_10210 PF01132 Elongation factor P (EF-P) OB domain A6J30_10210 PF09285 Elongation factor P, C-terminal A6J30_10220 PF02313 Fumarate reductase subunit D A6J30_10225 PF02300 Fumarate reductase subunit C A6J30_10230 PF13183 4Fe-4S dicluster domain A6J30_10230 PF13085 2Fe-2S iron-sulfur cluster binding domain A6J30_10235 PF00890 FAD binding domain A6J30_10235 PF02910 Fumarate reductase flavoprotein C-term A6J30_10245 PF00152 tRNA synthetases class II (D, K and N) A6J30_10255 PF00440 Bacterial regulatory proteins, tetR family A6J30_10255 PF08360 QacR-like protein, C-terminal region A6J30_10265 PF01551 Peptidase family M23 A6J30_10270 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_10270 PF06426 Serine acetyltransferase, N-terminal A6J30_10275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A6J30_10275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A6J30_10280 PF02556 Preprotein translocase subunit SecB A6J30_10285 PF00581 Rhodanese-like domain A6J30_10290 PF01676 Metalloenzyme superfamily A6J30_10290 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A6J30_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_10300 PF00672 HAMP domain A6J30_10305 PF00939 Sodium:sulfate symporter transmembrane region A6J30_10310 PF02666 Phosphatidylserine decarboxylase A6J30_10315 PF03193 RsgA GTPase A6J30_10320 PF00929 Exonuclease A6J30_10390 PF08331 Domain of unknown function (DUF1730) A6J30_10395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A6J30_10400 PF01520 N-acetylmuramoyl-L-alanine amidase A6J30_10405 PF01119 DNA mismatch repair protein, C-terminal domain A6J30_10405 PF08676 MutL C terminal dimerisation domain A6J30_10415 PF17209 Hfq protein A6J30_10420 PF13167 GTP-binding GTPase N-terminal A6J30_10420 PF16360 GTP-binding GTPase Middle Region A6J30_10420 PF01926 50S ribosome-binding GTPase A6J30_10425 PF12221 Bacterial membrane protein N terminal A6J30_10425 PF01145 SPFH domain / Band 7 family A6J30_10430 PF01145 SPFH domain / Band 7 family A6J30_10435 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) A6J30_10440 PF00709 Adenylosuccinate synthetase A6J30_10445 PF08238 Sel1 repeat A6J30_10450 PF00970 Oxidoreductase FAD-binding domain A6J30_10450 PF00175 Oxidoreductase NAD-binding domain A6J30_10450 PF00042 Globin A6J30_10455 PF02082 Transcriptional regulator A6J30_10460 PF00575 S1 RNA binding domain A6J30_10460 PF00773 RNB domain A6J30_10460 PF08206 Ribonuclease B OB domain A6J30_10460 PF08461 Ribonuclease R winged-helix domain A6J30_10460 PF17876 Cold shock domain A6J30_10465 PF00588 SpoU rRNA Methylase family A6J30_10465 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6J30_10470 PF13419 Haloacid dehalogenase-like hydrolase A6J30_10475 PF00579 tRNA synthetases class I (W and Y) A6J30_10490 PF00117 Glutamine amidotransferase class-I A6J30_10495 PF00202 Aminotransferase class-III A6J30_10500 PF04958 Arginine N-succinyltransferase beta subunit A6J30_10505 PF00171 Aldehyde dehydrogenase family A6J30_10515 PF13545 Crp-like helix-turn-helix domain A6J30_10515 PF00027 Cyclic nucleotide-binding domain A6J30_10520 PF00485 Phosphoribulokinase / Uridine kinase family A6J30_10525 PF06794 Uncharacterised protein family (UPF0270) A6J30_10530 PF00561 alpha/beta hydrolase fold A6J30_10540 PF00005 ABC transporter A6J30_10540 PF12848 ABC transporter A6J30_10545 PF02525 Flavodoxin-like fold A6J30_10550 PF00999 Sodium/hydrogen exchanger family A6J30_10550 PF02254 TrkA-N domain A6J30_10560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_10570 PF01112 Asparaginase A6J30_10575 PF04102 SlyX A6J30_10585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_10585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J30_10590 PF08348 YheO-like PAS domain A6J30_10590 PF13309 HTH domain A6J30_10595 PF02635 DsrE/DsrF-like family A6J30_10600 PF02635 DsrE/DsrF-like family A6J30_10605 PF04077 DsrH like protein A6J30_10610 PF00164 Ribosomal protein S12/S23 A6J30_10615 PF00177 Ribosomal protein S7p/S5e A6J30_10620 PF03144 Elongation factor Tu domain 2 A6J30_10620 PF00009 Elongation factor Tu GTP binding domain A6J30_10620 PF03764 Elongation factor G, domain IV A6J30_10620 PF14492 Elongation Factor G, domain II A6J30_10620 PF00679 Elongation factor G C-terminus A6J30_10625 PF03144 Elongation factor Tu domain 2 A6J30_10625 PF03143 Elongation factor Tu C-terminal domain A6J30_10625 PF00009 Elongation factor Tu GTP binding domain A6J30_10630 PF04324 BFD-like [2Fe-2S] binding domain A6J30_10635 PF00210 Ferritin-like domain A6J30_10640 PF03949 Malic enzyme, NAD binding domain A6J30_10640 PF00390 Malic enzyme, N-terminal domain A6J30_10645 PF01340 Met Apo-repressor, MetJ A6J30_10650 PF01053 Cys/Met metabolism PLP-dependent enzyme A6J30_10655 PF03447 Homoserine dehydrogenase, NAD binding domain A6J30_10655 PF00696 Amino acid kinase family A6J30_10655 PF00742 Homoserine dehydrogenase A6J30_10660 PF02219 Methylenetetrahydrofolate reductase A6J30_10670 PF00311 Phosphoenolpyruvate carboxylase A6J30_10675 PF01546 Peptidase family M20/M25/M40 A6J30_10675 PF07687 Peptidase dimerisation domain A6J30_10680 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J30_10680 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J30_10685 PF00696 Amino acid kinase family A6J30_10690 PF00764 Arginosuccinate synthase A6J30_10695 PF14698 Argininosuccinate lyase C-terminal A6J30_10695 PF00583 Acetyltransferase (GNAT) family A6J30_10695 PF00206 Lyase A6J30_10710 PF08534 Redoxin A6J30_10710 PF00462 Glutaredoxin A6J30_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_10715 PF03466 LysR substrate binding domain A6J30_10720 PF00912 Transglycosylase A6J30_10720 PF00905 Penicillin binding protein transpeptidase domain A6J30_10720 PF17092 Penicillin-binding protein OB-like domain A6J30_10745 PF00263 Bacterial type II and III secretion system protein A6J30_10745 PF03958 Bacterial type II/III secretion system short domain A6J30_10745 PF11741 AMIN domain A6J30_10745 PF07660 Secretin and TonB N terminus short domain A6J30_10750 PF01202 Shikimate kinase A6J30_10755 PF01761 3-dehydroquinate synthase A6J30_10765 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6J30_10770 PF00834 Ribulose-phosphate 3 epimerase family A6J30_10775 PF01250 Ribosomal protein S6 A6J30_10780 PF00436 Single-strand binding protein family A6J30_10785 PF01084 Ribosomal protein S18 A6J30_10790 PF03948 Ribosomal protein L9, C-terminal domain A6J30_10790 PF01281 Ribosomal protein L9, N-terminal domain A6J30_10800 PF03796 DnaB-like helicase C terminal domain A6J30_10800 PF00772 DnaB-like helicase N terminal domain A6J30_10805 PF00842 Alanine racemase, C-terminal domain A6J30_10805 PF01168 Alanine racemase, N-terminal domain A6J30_10815 PF01894 Uncharacterised protein family UPF0047 A6J30_10820 PF00342 Phosphoglucose isomerase A6J30_10830 PF01475 Ferric uptake regulator family A6J30_10835 PF01207 Dihydrouridine synthase (Dus) A6J30_10855 PF00667 FAD binding domain A6J30_10855 PF00258 Flavodoxin A6J30_10855 PF00175 Oxidoreductase NAD-binding domain A6J30_10860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6J30_10860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6J30_10865 PF01507 Phosphoadenosine phosphosulfate reductase family A6J30_10935 PF00999 Sodium/hydrogen exchanger family A6J30_10940 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6J30_10940 PF02574 Homocysteine S-methyltransferase A6J30_10940 PF00809 Pterin binding enzyme A6J30_10940 PF02607 B12 binding domain A6J30_10940 PF02310 B12 binding domain A6J30_10945 PF01842 ACT domain A6J30_10945 PF00696 Amino acid kinase family A6J30_10955 PF00266 Aminotransferase class-V A6J30_10965 PF17760 UvrA interaction domain A6J30_10965 PF17755 UvrA DNA-binding domain A6J30_10965 PF00005 ABC transporter A6J30_10970 PF00483 Nucleotidyl transferase A6J30_10975 PF00196 Bacterial regulatory proteins, luxR family A6J30_10980 PF00436 Single-strand binding protein family A6J30_10985 PF00563 EAL domain A6J30_10985 PF00990 Diguanylate cyclase, GGDEF domain A6J30_10985 PF17157 Gammaproteobacterial periplasmic sensor domain A6J30_11005 PF00263 Bacterial type II and III secretion system protein A6J30_11005 PF03958 Bacterial type II/III secretion system short domain A6J30_11005 PF11741 AMIN domain A6J30_11005 PF07660 Secretin and TonB N terminus short domain A6J30_11010 PF13401 AAA domain A6J30_11010 PF01471 Putative peptidoglycan binding domain A6J30_11020 PF00437 Type II/IV secretion system protein A6J30_11020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6J30_11025 PF00482 Type II secretion system (T2SS), protein F A6J30_11035 PF07963 Prokaryotic N-terminal methylation motif A6J30_11035 PF00114 Pilin (bacterial filament) A6J30_11075 PF04085 rod shape-determining protein MreC A6J30_11080 PF04093 rod shape-determining protein MreD A6J30_11085 PF02545 Maf-like protein A6J30_11090 PF10150 Ribonuclease E/G family A6J30_11090 PF00575 S1 RNA binding domain A6J30_11095 PF13116 Protein of unknown function A6J30_11095 PF13502 AsmA-like C-terminal region A6J30_11100 PF00795 Carbon-nitrogen hydrolase A6J30_11105 PF01523 Putative modulator of DNA gyrase A6J30_11110 PF02562 PhoH-like protein A6J30_11110 PF13638 PIN domain A6J30_11115 PF18337 RapA N-terminal Tudor like domain A6J30_11115 PF18339 RapA N-terminal Tudor like domain 1 A6J30_11115 PF00271 Helicase conserved C-terminal domain A6J30_11115 PF00176 SNF2 family N-terminal domain A6J30_11115 PF12137 RNA polymerase recycling family C-terminal A6J30_11130 PF00849 RNA pseudouridylate synthase A6J30_11135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J30_11135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J30_11140 PF04751 Protein of unknown function (DUF615) A6J30_11145 PF01523 Putative modulator of DNA gyrase A6J30_11150 PF01769 Divalent cation transporter A6J30_11150 PF03448 MgtE intracellular N domain A6J30_11150 PF00571 CBS domain A6J30_11155 PF00381 PTS HPr component phosphorylation site A6J30_11160 PF03668 P-loop ATPase protein family A6J30_11165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_11170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6J30_11175 PF04552 Sigma-54, DNA binding domain A6J30_11175 PF04963 Sigma-54 factor, core binding domain A6J30_11175 PF00309 Sigma-54 factor, Activator interacting domain (AID) A6J30_11180 PF00005 ABC transporter A6J30_11180 PF12399 Branched-chain amino acid ATP-binding cassette transporter A6J30_11185 PF03968 OstA-like protein A6J30_11195 PF01380 SIS domain A6J30_11195 PF00571 CBS domain A6J30_11200 PF01699 Sodium/calcium exchanger protein A6J30_11205 PF00005 ABC transporter A6J30_11210 PF02405 Permease MlaE A6J30_11215 PF02470 MlaD protein A6J30_11220 PF05494 MlaC protein A6J30_11230 PF01722 BolA-like protein A6J30_11235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6J30_11240 PF01553 Acyltransferase A6J30_11245 PF01042 Endoribonuclease L-PSP A6J30_11250 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A6J30_11250 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A6J30_11255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6J30_11255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6J30_11265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6J30_11265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6J30_11280 PF06877 Regulator of ribonuclease activity B A6J30_11290 PF00583 Acetyltransferase (GNAT) family A6J30_11300 PF10458 Valyl tRNA synthetase tRNA binding arm A6J30_11300 PF00133 tRNA synthetases class I (I, L, M and V) A6J30_11300 PF08264 Anticodon-binding domain of tRNA A6J30_11305 PF04364 DNA polymerase III chi subunit, HolC A6J30_11310 PF02789 Cytosol aminopeptidase family, N-terminal domain A6J30_11310 PF00883 Cytosol aminopeptidase family, catalytic domain A6J30_11315 PF03739 Lipopolysaccharide export system permease LptF/LptG A6J30_11320 PF03739 Lipopolysaccharide export system permease LptF/LptG A6J30_11330 PF10011 Predicted membrane protein (DUF2254) A6J30_11335 PF00106 short chain dehydrogenase A6J30_11350 PF01522 Polysaccharide deacetylase A6J30_11355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_11360 PF02378 Phosphotransferase system, EIIC A6J30_11365 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A6J30_11370 PF11975 Family 4 glycosyl hydrolase C-terminal domain A6J30_11370 PF02056 Family 4 glycosyl hydrolase A6J30_11375 PF04794 YdjC-like protein A6J30_11380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J30_11380 PF00356 Bacterial regulatory proteins, lacI family A6J30_11385 PF00072 Response regulator receiver domain A6J30_11435 PF00171 Aldehyde dehydrogenase family A6J30_11465 PF00672 HAMP domain A6J30_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_11465 PF17200 Single Cache domain 2 A6J30_11505 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A6J30_11505 PF01464 Transglycosylase SLT domain A6J30_11510 PF04362 Bacterial Fe(2+) trafficking A6J30_11515 PF14815 NUDIX domain A6J30_11515 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J30_11515 PF00633 Helix-hairpin-helix motif A6J30_11520 PF02390 Putative methyltransferase A6J30_11525 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6J30_11530 PF04960 Glutaminase A6J30_11535 PF04055 Radical SAM superfamily A6J30_11535 PF06969 HemN C-terminal domain A6J30_11540 PF01725 Ham1 family A6J30_11550 PF02594 Uncharacterised ACR, YggU family COG1872 A6J30_11555 PF02325 YGGT family A6J30_11560 PF14748 Pyrroline-5-carboxylate reductase dimerisation A6J30_11560 PF03807 NADP oxidoreductase coenzyme F420-dependent A6J30_11565 PF01168 Alanine racemase, N-terminal domain A6J30_11570 PF00437 Type II/IV secretion system protein A6J30_11575 PF00437 Type II/IV secretion system protein A6J30_11580 PF03652 Holliday junction resolvase A6J30_11585 PF02622 Uncharacterized ACR, COG1678 A6J30_11590 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A6J30_11590 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A6J30_11595 PF04452 RNA methyltransferase A6J30_11600 PF04231 Endonuclease I A6J30_11605 PF17283 SprT-like zinc ribbon domain A6J30_11605 PF10263 SprT-like family A6J30_11615 PF00438 S-adenosylmethionine synthetase, N-terminal domain A6J30_11615 PF02773 S-adenosylmethionine synthetase, C-terminal domain A6J30_11615 PF02772 S-adenosylmethionine synthetase, central domain A6J30_11625 PF02779 Transketolase, pyrimidine binding domain A6J30_11625 PF00456 Transketolase, thiamine diphosphate binding domain A6J30_11625 PF02780 Transketolase, C-terminal domain A6J30_11630 PF03466 LysR substrate binding domain A6J30_11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_11635 PF07715 TonB-dependent Receptor Plug Domain A6J30_11635 PF00593 TonB dependent receptor A6J30_11640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J30_11640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J30_11645 PF00162 Phosphoglycerate kinase A6J30_11650 PF01116 Fructose-bisphosphate aldolase class-II A6J30_11655 PF00924 Mechanosensitive ion channel A6J30_11655 PF05552 Conserved TM helix A6J30_11660 PF04073 Aminoacyl-tRNA editing domain A6J30_11665 PF01810 LysE type translocator A6J30_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_11670 PF03466 LysR substrate binding domain A6J30_11675 PF04402 Protein of unknown function (DUF541) A6J30_11680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J30_11680 PF01842 ACT domain A6J30_11680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J30_11685 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A6J30_11690 PF01812 5-formyltetrahydrofolate cyclo-ligase family A6J30_11700 PF05164 Cell division protein ZapA A6J30_11705 PF03695 Uncharacterised protein family (UPF0149) A6J30_11710 PF01494 FAD binding domain A6J30_11715 PF01494 FAD binding domain A6J30_11730 PF01571 Aminomethyltransferase folate-binding domain A6J30_11735 PF03937 Flavinator of succinate dehydrogenase A6J30_11745 PF00890 FAD binding domain A6J30_11745 PF02910 Fumarate reductase flavoprotein C-term A6J30_11750 PF04542 Sigma-70 region 2 A6J30_11750 PF08281 Sigma-70, region 4 A6J30_11755 PF03873 Anti sigma-E protein RseA, C-terminal domain A6J30_11755 PF03872 Anti sigma-E protein RseA, N-terminal domain A6J30_11760 PF03888 MucB/RseB N-terminal domain A6J30_11760 PF17188 MucB/RseB C-terminal domain A6J30_11770 PF00009 Elongation factor Tu GTP binding domain A6J30_11770 PF03144 Elongation factor Tu domain 2 A6J30_11770 PF00679 Elongation factor G C-terminus A6J30_11770 PF06421 GTP-binding protein LepA C-terminus A6J30_11775 PF10502 Signal peptidase, peptidase S26 A6J30_11780 PF14622 Ribonuclease-III-like A6J30_11780 PF00035 Double-stranded RNA binding motif A6J30_11785 PF07650 KH domain A6J30_11785 PF01926 50S ribosome-binding GTPase A6J30_11790 PF11967 Recombination protein O N terminal A6J30_11790 PF02565 Recombination protein O C terminal A6J30_11795 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A6J30_11800 PF01648 4'-phosphopantetheinyl transferase superfamily A6J30_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_11805 PF00672 HAMP domain A6J30_11805 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J30_11805 PF00512 His Kinase A (phospho-acceptor) domain A6J30_11805 PF01627 Hpt domain A6J30_11805 PF00072 Response regulator receiver domain A6J30_11815 PF01938 TRAM domain A6J30_11815 PF05958 tRNA (Uracil-5-)-methyltransferase A6J30_11820 PF13291 ACT domain A6J30_11820 PF04607 Region found in RelA / SpoT proteins A6J30_11820 PF02824 TGS domain A6J30_11825 PF03819 MazG nucleotide pyrophosphohydrolase domain A6J30_11830 PF00117 Glutamine amidotransferase class-I A6J30_11830 PF06418 CTP synthase N-terminus A6J30_11835 PF03952 Enolase, N-terminal domain A6J30_11835 PF00113 Enolase, C-terminal TIM barrel domain A6J30_11840 PF04977 Septum formation initiator A6J30_11845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6J30_11850 PF02542 YgbB family A6J30_11855 PF01142 tRNA pseudouridine synthase D (TruD) A6J30_11860 PF01975 Survival protein SurE A6J30_11870 PF01476 LysM domain A6J30_11870 PF01551 Peptidase family M23 A6J30_11880 PF05190 MutS family domain IV A6J30_11880 PF05192 MutS domain III A6J30_11880 PF05188 MutS domain II A6J30_11880 PF00488 MutS domain V A6J30_11880 PF01624 MutS domain I A6J30_11885 PF02464 Competence-damaged protein A6J30_11890 PF00154 recA bacterial DNA recombination protein A6J30_11895 PF02631 RecX family A6J30_11900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6J30_11900 PF01411 tRNA synthetases class II (A) A6J30_11900 PF02272 DHHA1 domain A6J30_11905 PF01842 ACT domain A6J30_11905 PF00696 Amino acid kinase family A6J30_11905 PF13840 ACT domain A6J30_11910 PF02599 Global regulator protein family A6J30_11965 PF04277 Oxaloacetate decarboxylase, gamma chain A6J30_11970 PF00364 Biotin-requiring enzyme A6J30_11970 PF02436 Conserved carboxylase domain A6J30_11970 PF00682 HMGL-like A6J30_11975 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6J30_11980 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_11980 PF00107 Zinc-binding dehydrogenase A6J30_11985 PF09335 SNARE associated Golgi protein A6J30_11990 PF05193 Peptidase M16 inactive domain A6J30_11990 PF00675 Insulinase (Peptidase family M16) A6J30_11995 PF04262 Glutamate-cysteine ligase A6J30_12005 PF02664 S-Ribosylhomocysteinase (LuxS) A6J30_12010 PF01595 Cyclin M transmembrane N-terminal domain A6J30_12010 PF03471 Transporter associated domain A6J30_12010 PF00571 CBS domain A6J30_12015 PF01578 Cytochrome C assembly protein A6J30_12020 PF02881 SRP54-type protein, helical bundle domain A6J30_12020 PF02978 Signal peptide binding domain A6J30_12020 PF00448 SRP54-type protein, GTPase domain A6J30_12025 PF00886 Ribosomal protein S16 A6J30_12030 PF01782 RimM N-terminal domain A6J30_12030 PF05239 PRC-barrel domain A6J30_12035 PF01746 tRNA (Guanine-1)-methyltransferase A6J30_12040 PF01245 Ribosomal protein L19 A6J30_12045 PF03884 DNA gyrase inhibitor YacG A6J30_12050 PF07072 Cell division protein A6J30_12055 PF01121 Dephospho-CoA kinase A6J30_12060 PF01478 Type IV leader peptidase family A6J30_12060 PF06750 Bacterial Peptidase A24 N-terminal domain A6J30_12065 PF00482 Type II secretion system (T2SS), protein F A6J30_12070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6J30_12070 PF00437 Type II/IV secretion system protein A6J30_12080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A6J30_12080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A6J30_12085 PF01510 N-acetylmuramoyl-L-alanine amidase A6J30_12090 PF00392 Bacterial regulatory proteins, gntR family A6J30_12090 PF07729 FCD domain A6J30_12095 PF00456 Transketolase, thiamine diphosphate binding domain A6J30_12095 PF17831 Pyruvate dehydrogenase E1 component middle domain A6J30_12100 PF00364 Biotin-requiring enzyme A6J30_12100 PF02817 e3 binding domain A6J30_12100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6J30_12105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J30_12105 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_12110 PF00440 Bacterial regulatory proteins, tetR family A6J30_12115 PF00156 Phosphoribosyl transferase domain A6J30_12120 PF00484 Carbonic anhydrase A6J30_12125 PF01740 STAS domain A6J30_12125 PF00916 Sulfate permease family A6J30_12130 PF00005 ABC transporter A6J30_12135 PF01061 ABC-2 type transporter A6J30_12145 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J30_12150 PF02569 Pantoate-beta-alanine ligase A6J30_12155 PF02548 Ketopantoate hydroxymethyltransferase A6J30_12160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6J30_12165 PF01743 Poly A polymerase head domain A6J30_12165 PF12626 Polymerase A arginine-rich C-terminus A6J30_12165 PF12627 Probable RNA and SrmB- binding site of polymerase A A6J30_12170 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J30_12175 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6J30_12180 PF03749 Sugar fermentation stimulation protein RE domain A6J30_12180 PF17746 SfsA N-terminal OB domain A6J30_12185 PF00270 DEAD/DEAH box helicase A6J30_12185 PF04408 Helicase associated domain (HA2) A6J30_12185 PF00271 Helicase conserved C-terminal domain A6J30_12185 PF08482 ATP-dependent helicase C-terminal A6J30_12190 PF00905 Penicillin binding protein transpeptidase domain A6J30_12190 PF00912 Transglycosylase A6J30_12190 PF14814 Bifunctional transglycosylase second domain A6J30_12195 PF01734 Patatin-like phospholipase A6J30_12200 PF11791 Aconitate B N-terminal domain A6J30_12200 PF00330 Aconitase family (aconitate hydratase) A6J30_12200 PF06434 Aconitate hydratase 2 N-terminus A6J30_12205 PF06062 Uncharacterised protein family (UPF0231) A6J30_12210 PF00543 Nitrogen regulatory protein P-II A6J30_12215 PF00909 Ammonium Transporter Family A6J30_12220 PF13416 Bacterial extracellular solute-binding protein A6J30_12230 PF00005 ABC transporter A6J30_12230 PF08402 TOBE domain A6J30_12235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J30_12235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J30_12235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J30_12235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J30_12240 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A6J30_12240 PF06165 Glycosyltransferase family 36 A6J30_12245 PF00728 Glycosyl hydrolase family 20, catalytic domain A6J30_12245 PF02838 Glycosyl hydrolase family 20, domain 2 A6J30_12250 PF01869 BadF/BadG/BcrA/BcrD ATPase family A6J30_12260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_12260 PF00005 ABC transporter A6J30_12265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_12265 PF00005 ABC transporter A6J30_12270 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_12270 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_12275 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_12280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_12285 PF00512 His Kinase A (phospho-acceptor) domain A6J30_12285 PF00072 Response regulator receiver domain A6J30_12285 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_12295 PF08468 Methyltransferase small domain N-terminal A6J30_12295 PF05175 Methyltransferase small domain A6J30_12300 PF01594 AI-2E family transporter A6J30_12305 PF00202 Aminotransferase class-III A6J30_12310 PF01521 Iron-sulphur cluster biosynthesis A6J30_12320 PF00873 AcrB/AcrD/AcrF family A6J30_12325 PF01551 Peptidase family M23 A6J30_12325 PF08525 Opacity-associated protein A N-terminal motif A6J30_12325 PF01476 LysM domain A6J30_12330 PF00579 tRNA synthetases class I (W and Y) A6J30_12340 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A6J30_12345 PF13609 Gram-negative porin A6J30_12350 PF03449 Transcription elongation factor, N-terminal A6J30_12350 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J30_12355 PF01985 CRS1 / YhbY (CRM) domain A6J30_12360 PF01728 FtsJ-like methyltransferase A6J30_12365 PF01434 Peptidase family M41 A6J30_12365 PF17862 AAA+ lid domain A6J30_12365 PF06480 FtsH Extracellular A6J30_12365 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_12370 PF00809 Pterin binding enzyme A6J30_12375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J30_12375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J30_12375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J30_12375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J30_12385 PF03840 Preprotein translocase SecG subunit A6J30_12400 PF17384 RimP C-terminal SH3 domain A6J30_12400 PF02576 RimP N-terminal domain A6J30_12405 PF13184 NusA-like KH domain A6J30_12405 PF00575 S1 RNA binding domain A6J30_12405 PF08529 NusA N-terminal domain A6J30_12410 PF11987 Translation-initiation factor 2 A6J30_12410 PF00009 Elongation factor Tu GTP binding domain A6J30_12410 PF04760 Translation initiation factor IF-2, N-terminal region A6J30_12410 PF08364 Bacterial translation initiation factor IF-2 associated region A6J30_12415 PF02033 Ribosome-binding factor A A6J30_12420 PF09157 Pseudouridine synthase II TruB, C-terminal A6J30_12420 PF16198 tRNA pseudouridylate synthase B C-terminal domain A6J30_12420 PF01509 TruB family pseudouridylate synthase (N terminal domain) A6J30_12425 PF00312 Ribosomal protein S15 A6J30_12430 PF00575 S1 RNA binding domain A6J30_12430 PF03725 3' exoribonuclease family, domain 2 A6J30_12430 PF00013 KH domain A6J30_12430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A6J30_12430 PF01138 3' exoribonuclease family, domain 1 A6J30_12435 PF07719 Tetratricopeptide repeat A6J30_12435 PF13181 Tetratricopeptide repeat A6J30_12445 PF01554 MatE A6J30_12460 PF03707 Bacterial signalling protein N terminal repeat A6J30_12460 PF00990 Diguanylate cyclase, GGDEF domain A6J30_12460 PF00563 EAL domain A6J30_12470 PF13508 Acetyltransferase (GNAT) domain A6J30_12490 PF16658 Class II release factor RF3, C-terminal domain A6J30_12490 PF03144 Elongation factor Tu domain 2 A6J30_12490 PF00009 Elongation factor Tu GTP binding domain A6J30_12500 PF01026 TatD related DNase A6J30_12505 PF07662 Na+ dependent nucleoside transporter C-terminus A6J30_12505 PF07670 Nucleoside recognition A6J30_12505 PF01773 Na+ dependent nucleoside transporter N-terminus A6J30_12510 PF01791 DeoC/LacD family aldolase A6J30_12515 PF02885 Glycosyl transferase family, helical bundle domain A6J30_12515 PF00591 Glycosyl transferase family, a/b domain A6J30_12515 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A6J30_12520 PF01676 Metalloenzyme superfamily A6J30_12525 PF01048 Phosphorylase superfamily A6J30_12535 PF18429 Domain of unknown function (DUF5609) A6J30_12545 PF18073 Rubredoxin metal binding domain A6J30_12550 PF14492 Elongation Factor G, domain II A6J30_12550 PF00679 Elongation factor G C-terminus A6J30_12550 PF00009 Elongation factor Tu GTP binding domain A6J30_12550 PF03144 Elongation factor Tu domain 2 A6J30_12550 PF03764 Elongation factor G, domain IV A6J30_12555 PF03466 LysR substrate binding domain A6J30_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_12565 PF00501 AMP-binding enzyme A6J30_12570 PF12833 Helix-turn-helix domain A6J30_12570 PF02805 Metal binding domain of Ada A6J30_12595 PF04972 BON domain A6J30_12595 PF00263 Bacterial type II and III secretion system protein A6J30_12595 PF13629 Pilus formation protein N terminal region A6J30_12625 PF00437 Type II/IV secretion system protein A6J30_12655 PF03466 LysR substrate binding domain A6J30_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_12660 PF13520 Amino acid permease A6J30_12665 PF04074 YhcH/YjgK/YiaL A6J30_12670 PF16353 Domain of unknown function(DUF4981) A6J30_12670 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6J30_12670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6J30_12670 PF00703 Glycosyl hydrolases family 2 A6J30_12670 PF02929 Beta galactosidase small chain A6J30_12675 PF00356 Bacterial regulatory proteins, lacI family A6J30_12680 PF16363 GDP-mannose 4,6 dehydratase A6J30_12685 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A6J30_12685 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A6J30_12690 PF10509 Galactokinase galactose-binding signature A6J30_12690 PF08544 GHMP kinases C terminal A6J30_12690 PF00288 GHMP kinases N terminal domain A6J30_12695 PF01263 Aldose 1-epimerase A6J30_12700 PF00356 Bacterial regulatory proteins, lacI family A6J30_12715 PF00356 Bacterial regulatory proteins, lacI family A6J30_12720 PF01588 Putative tRNA binding domain A6J30_12735 PF01544 CorA-like Mg2+ transporter protein A6J30_12740 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A6J30_12740 PF01266 FAD dependent oxidoreductase A6J30_12745 PF08220 DeoR-like helix-turn-helix domain A6J30_12745 PF00455 DeoR C terminal sensor domain A6J30_12750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6J30_12750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6J30_12755 PF00230 Major intrinsic protein A6J30_12765 PF07690 Major Facilitator Superfamily A6J30_12770 PF03009 Glycerophosphoryl diester phosphodiesterase family A6J30_12775 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle A6J30_12775 PF14602 Hexapeptide repeat of succinyl-transferase A6J30_12780 PF07130 YebG protein A6J30_12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_12785 PF03466 LysR substrate binding domain A6J30_12795 PF11893 Domain of unknown function (DUF3413) A6J30_12795 PF00884 Sulfatase A6J30_12800 PF17946 RecC C-terminal domain A6J30_12810 PF00580 UvrD/REP helicase N-terminal domain A6J30_12810 PF12705 PD-(D/E)XK nuclease superfamily A6J30_12810 PF13361 UvrD-like helicase C-terminal domain A6J30_12815 PF13538 UvrD-like helicase C-terminal domain A6J30_12825 PF00696 Amino acid kinase family A6J30_12825 PF00583 Acetyltransferase (GNAT) family A6J30_12840 PF06725 3D domain A6J30_12840 PF03562 MltA specific insert domain A6J30_12845 PF00899 ThiF family A6J30_12850 PF02657 Fe-S metabolism associated domain A6J30_12855 PF17158 Membrane-associated sensor, integral membrane domain A6J30_12855 PF00990 Diguanylate cyclase, GGDEF domain A6J30_12860 PF00266 Aminotransferase class-V A6J30_12865 PF01965 DJ-1/PfpI family A6J30_12870 PF02558 Ketopantoate reductase PanE/ApbA A6J30_12870 PF08546 Ketopantoate reductase PanE/ApbA C terminal A6J30_12875 PF03502 Nucleoside-specific channel-forming protein, Tsx A6J30_12900 PF04542 Sigma-70 region 2 A6J30_12900 PF04545 Sigma-70, region 4 A6J30_12910 PF07690 Major Facilitator Superfamily A6J30_12915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6J30_12920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A6J30_12920 PF03923 Uncharacterized lipoprotein A6J30_12925 PF05175 Methyltransferase small domain A6J30_12930 PF01722 BolA-like protein A6J30_12940 PF11973 NQRA C-terminal domain A6J30_12940 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) A6J30_12945 PF03116 NQR2, RnfD, RnfE family A6J30_12950 PF04205 FMN-binding domain A6J30_12955 PF02508 Rnf-Nqr subunit, membrane protein A6J30_12960 PF02508 Rnf-Nqr subunit, membrane protein A6J30_12965 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_12965 PF00970 Oxidoreductase FAD-binding domain A6J30_12965 PF00175 Oxidoreductase NAD-binding domain A6J30_12970 PF02424 ApbE family A6J30_12985 PF00817 impB/mucB/samB family A6J30_12985 PF11798 IMS family HHH motif A6J30_12985 PF11799 impB/mucB/samB family C-terminal domain A6J30_12990 PF16124 RecQ zinc-binding A6J30_12990 PF00271 Helicase conserved C-terminal domain A6J30_12990 PF00270 DEAD/DEAH box helicase A6J30_12990 PF09382 RQC domain A6J30_12990 PF00570 HRDC domain A6J30_12995 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J30_12995 PF03449 Transcription elongation factor, N-terminal A6J30_13010 PF00209 Sodium:neurotransmitter symporter family A6J30_13020 PF06786 Uncharacterised protein family (UPF0253) A6J30_13030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J30_13030 PF03129 Anticodon binding domain A6J30_13030 PF04073 Aminoacyl-tRNA editing domain A6J30_13035 PF18389 TrmO C-terminal domain A6J30_13035 PF01980 tRNA-methyltransferase O A6J30_13040 PF01197 Ribosomal protein L31 A6J30_13045 PF00444 Ribosomal protein L36 A6J30_13055 PF03806 AbgT putative transporter family A6J30_13060 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A6J30_13085 PF04287 tRNA pseudouridine synthase C A6J30_13090 PF00849 RNA pseudouridylate synthase A6J30_13095 PF11944 Protein of unknown function (DUF3461) A6J30_13100 PF01909 Nucleotidyltransferase domain A6J30_13100 PF01842 ACT domain A6J30_13100 PF01966 HD domain A6J30_13100 PF08335 GlnD PII-uridylyltransferase A6J30_13105 PF00557 Metallopeptidase family M24 A6J30_13110 PF00318 Ribosomal protein S2 A6J30_13115 PF00889 Elongation factor TS A6J30_13120 PF00696 Amino acid kinase family A6J30_13125 PF01765 Ribosome recycling factor A6J30_13130 PF01255 Putative undecaprenyl diphosphate synthase A6J30_13140 PF13288 DXP reductoisomerase C-terminal domain A6J30_13140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A6J30_13140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A6J30_13145 PF02163 Peptidase family M50 A6J30_13145 PF17820 PDZ domain A6J30_13150 PF07244 Surface antigen variable number repeat A6J30_13150 PF01103 Surface antigen A6J30_13155 PF03938 Outer membrane protein (OmpH-like) A6J30_13160 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_13160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A6J30_13165 PF07977 FabA-like domain A6J30_13170 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_13170 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A6J30_13175 PF02684 Lipid-A-disaccharide synthetase A6J30_13180 PF01351 Ribonuclease HII A6J30_13185 PF14579 Helix-hairpin-helix motif A6J30_13185 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6J30_13185 PF02811 PHP domain A6J30_13185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6J30_13185 PF01336 OB-fold nucleic acid binding domain A6J30_13190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A6J30_13195 PF09179 TilS substrate binding domain A6J30_13195 PF11734 TilS substrate C-terminal domain A6J30_13195 PF01171 PP-loop family A6J30_13200 PF00034 Cytochrome c A6J30_13205 PF00543 Nitrogen regulatory protein P-II A6J30_13210 PF03372 Endonuclease/Exonuclease/phosphatase family A6J30_13220 PF01476 LysM domain A6J30_13220 PF01464 Transglycosylase SLT domain A6J30_13225 PF16123 Hydroxyacylglutathione hydrolase C-terminus A6J30_13225 PF00753 Metallo-beta-lactamase superfamily A6J30_13230 PF08241 Methyltransferase domain A6J30_13235 PF00075 RNase H A6J30_13240 PF00929 Exonuclease A6J30_13250 PF01740 STAS domain A6J30_13250 PF00916 Sulfate permease family A6J30_13255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J30_13255 PF09317 Domain of unknown function (DUF1974) A6J30_13255 PF02770 Acyl-CoA dehydrogenase, middle domain A6J30_13255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J30_13260 PF13580 SIS domain A6J30_13265 PF13230 Glutamine amidotransferases class-II A6J30_13270 PF00551 Formyl transferase A6J30_13275 PF02769 AIR synthase related protein, C-terminal domain A6J30_13275 PF00586 AIR synthase related protein, N-terminal domain A6J30_13285 PF00860 Permease family A6J30_13300 PF03358 NADPH-dependent FMN reductase A6J30_13305 PF03960 ArsC family A6J30_13310 PF13181 Tetratricopeptide repeat A6J30_13310 PF01435 Peptidase family M48 A6J30_13320 PF01594 AI-2E family transporter A6J30_13325 PF00578 AhpC/TSA family A6J30_13330 PF01842 ACT domain A6J30_13335 PF00701 Dihydrodipicolinate synthetase family A6J30_13355 PF07687 Peptidase dimerisation domain A6J30_13355 PF01546 Peptidase family M20/M25/M40 A6J30_13360 PF03960 ArsC family A6J30_13385 PF11143 Protein of unknown function (DUF2919) A6J30_13390 PF04261 Dyp-type peroxidase family A6J30_13395 PF00669 Bacterial flagellin N-terminal helical region A6J30_13395 PF07196 Flagellin hook IN motif A6J30_13395 PF00700 Bacterial flagellin C-terminal helical region A6J30_13405 PF00700 Bacterial flagellin C-terminal helical region A6J30_13405 PF07196 Flagellin hook IN motif A6J30_13405 PF00669 Bacterial flagellin N-terminal helical region A6J30_13410 PF00700 Bacterial flagellin C-terminal helical region A6J30_13410 PF07196 Flagellin hook IN motif A6J30_13410 PF00669 Bacterial flagellin N-terminal helical region A6J30_13415 PF03646 FlaG protein A6J30_13420 PF07196 Flagellin hook IN motif A6J30_13420 PF07195 Flagellar hook-associated protein 2 C-terminus A6J30_13420 PF02465 Flagellar hook-associated protein 2 N-terminus A6J30_13430 PF02561 Flagellar protein FliS A6J30_13435 PF02954 Bacterial regulatory protein, Fis family A6J30_13435 PF00158 Sigma-54 interaction domain A6J30_13435 PF01590 GAF domain A6J30_13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_13440 PF00512 His Kinase A (phospho-acceptor) domain A6J30_13445 PF00158 Sigma-54 interaction domain A6J30_13445 PF00072 Response regulator receiver domain A6J30_13445 PF02954 Bacterial regulatory protein, Fis family A6J30_13450 PF02049 Flagellar hook-basal body complex protein FliE A6J30_13455 PF01514 Secretory protein of YscJ/FliF family A6J30_13455 PF08345 Flagellar M-ring protein C-terminal A6J30_13460 PF14841 FliG middle domain A6J30_13460 PF14842 FliG N-terminal domain A6J30_13460 PF01706 FliG C-terminal domain A6J30_13470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_13470 PF18269 T3SS EscN ATPase C-terminal domain A6J30_13490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J30_13490 PF02154 Flagellar motor switch protein FliM A6J30_13495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J30_13500 PF04347 Flagellar biosynthesis protein, FliO A6J30_13505 PF00813 FliP family A6J30_13510 PF01313 Bacterial export proteins, family 3 A6J30_13515 PF01311 Bacterial export proteins, family 1 A6J30_13520 PF01312 FlhB HrpN YscU SpaS Family A6J30_13525 PF00771 FHIPEP family A6J30_13530 PF00448 SRP54-type protein, GTPase domain A6J30_13535 PF10609 NUBPL iron-transfer P-loop NTPase A6J30_13540 PF04542 Sigma-70 region 2 A6J30_13540 PF04545 Sigma-70, region 4 A6J30_13540 PF04539 Sigma-70 region 3 A6J30_13545 PF00072 Response regulator receiver domain A6J30_13550 PF04344 Chemotaxis phosphatase, CheZ A6J30_13555 PF07194 P2 response regulator binding domain A6J30_13555 PF02895 Signal transducing histidine kinase, homodimeric domain A6J30_13555 PF01584 CheW-like domain A6J30_13555 PF01627 Hpt domain A6J30_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_13560 PF00072 Response regulator receiver domain A6J30_13560 PF01339 CheB methylesterase A6J30_13565 PF13614 AAA domain A6J30_13575 PF01584 CheW-like domain A6J30_13585 PF00005 ABC transporter A6J30_13590 PF03379 CcmB protein A6J30_13595 PF01578 Cytochrome C assembly protein A6J30_13600 PF04995 Heme exporter protein D (CcmD) A6J30_13605 PF03100 CcmE A6J30_13610 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6J30_13610 PF01578 Cytochrome C assembly protein A6J30_13615 PF08534 Redoxin A6J30_13620 PF03918 Cytochrome C biogenesis protein A6J30_13630 PF04333 MlaA lipoprotein A6J30_13635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J30_13640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J30_13650 PF08281 Sigma-70, region 4 A6J30_13650 PF04542 Sigma-70 region 2 A6J30_13660 PF02803 Thiolase, C-terminal domain A6J30_13660 PF00108 Thiolase, N-terminal domain A6J30_13665 PF00378 Enoyl-CoA hydratase/isomerase A6J30_13665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6J30_13665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6J30_13675 PF16187 Middle or third domain of peptidase_M16 A6J30_13675 PF05193 Peptidase M16 inactive domain A6J30_13675 PF00675 Insulinase (Peptidase family M16) A6J30_13680 PF00300 Histidine phosphatase superfamily (branch 1) A6J30_13685 PF01713 Smr domain A6J30_13690 PF05175 Methyltransferase small domain A6J30_13695 PF01264 Chorismate synthase A6J30_13700 PF03458 UPF0126 domain A6J30_13710 PF04315 Elongation factor P hydroxylase A6J30_13715 PF08891 YfcL protein A6J30_13725 PF03358 NADPH-dependent FMN reductase A6J30_13730 PF01266 FAD dependent oxidoreductase A6J30_13730 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A6J30_13735 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J30_13735 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J30_13745 PF11890 Domain of unknown function (DUF3410) A6J30_13745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J30_13745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J30_13750 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J30_13750 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J30_13760 PF01416 tRNA pseudouridine synthase A6J30_13770 PF17848 Acetyl-coA carboxylase zinc finger domain A6J30_13770 PF01039 Carboxyl transferase domain A6J30_13775 PF02875 Mur ligase family, glutamate ligase domain A6J30_13775 PF08245 Mur ligase middle domain A6J30_13780 PF05036 Sporulation related domain A6J30_13785 PF02674 Colicin V production protein A6J30_13790 PF00156 Phosphoribosyl transferase domain A6J30_13795 PF03466 LysR substrate binding domain A6J30_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_13800 PF00072 Response regulator receiver domain A6J30_13810 PF04304 Protein of unknown function (DUF454) A6J30_13815 PF00156 Phosphoribosyl transferase domain A6J30_13820 PF12169 DNA polymerase III subunits gamma and tau domain III A6J30_13820 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A6J30_13820 PF12170 DNA polymerase III tau subunit V interacting with alpha A6J30_13825 PF02575 YbaB/EbfC DNA-binding family A6J30_13830 PF13662 Toprim domain A6J30_13830 PF02132 RecR protein A6J30_13835 PF00230 Major intrinsic protein A6J30_13845 PF01042 Endoribonuclease L-PSP A6J30_13850 PF03313 Serine dehydratase alpha chain A6J30_13860 PF03692 Putative zinc- or iron-chelating domain A6J30_13865 PF04226 Transglycosylase associated protein A6J30_13870 PF03692 Putative zinc- or iron-chelating domain A6J30_13875 PF05552 Conserved TM helix A6J30_13875 PF00924 Mechanosensitive ion channel A6J30_13880 PF03992 Antibiotic biosynthesis monooxygenase A6J30_13885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_13895 PF00245 Alkaline phosphatase A6J30_13915 PF13847 Methyltransferase domain A6J30_13920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_13920 PF00672 HAMP domain A6J30_13920 PF02743 Cache domain A6J30_13925 PF01263 Aldose 1-epimerase A6J30_13930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J30_13930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J30_13935 PF01641 SelR domain A6J30_13945 PF07023 Protein of unknown function (DUF1315) A6J30_13950 PF17763 Glutaminase/Asparaginase C-terminal domain A6J30_13950 PF00710 Asparaginase, N-terminal A6J30_13955 PF01343 Peptidase family S49 A6J30_13960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J30_13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_13965 PF00881 Nitroreductase family A6J30_13970 PF01131 DNA topoisomerase A6J30_13970 PF01751 Toprim domain A6J30_13985 PF00106 short chain dehydrogenase A6J30_13990 PF00850 Histone deacetylase domain A6J30_14050 PF00589 Phage integrase family A6J30_14050 PF14659 Phage integrase, N-terminal SAM-like domain A6J30_14060 PF11893 Domain of unknown function (DUF3413) A6J30_14060 PF00884 Sulfatase A6J30_14065 PF07208 Protein of unknown function (DUF1414) A6J30_14070 PF04245 37-kD nucleoid-associated bacterial protein A6J30_14085 PF03553 Na+/H+ antiporter family A6J30_14090 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J30_14090 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J30_14095 PF00027 Cyclic nucleotide-binding domain A6J30_14095 PF00520 Ion transport protein A6J30_14100 PF01914 MarC family integral membrane protein A6J30_14105 PF00465 Iron-containing alcohol dehydrogenase A6J30_14105 PF00171 Aldehyde dehydrogenase family A6J30_14120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6J30_14120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6J30_14125 PF00462 Glutaredoxin A6J30_14135 PF03553 Na+/H+ antiporter family A6J30_14135 PF13726 Na+-H+ antiporter family A6J30_14140 PF00929 Exonuclease A6J30_14145 PF00691 OmpA family A6J30_14145 PF18393 MotY N-terminal domain A6J30_14150 PF10952 Protein of unknown function (DUF2753) A6J30_14155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_14160 PF00633 Helix-hairpin-helix motif A6J30_14160 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J30_14160 PF10576 Iron-sulfur binding domain of endonuclease III A6J30_14165 PF02508 Rnf-Nqr subunit, membrane protein A6J30_14170 PF04205 FMN-binding domain A6J30_14175 PF03116 NQR2, RnfD, RnfE family A6J30_14180 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6J30_14180 PF10531 SLBB domain A6J30_14180 PF12838 4Fe-4S dicluster domain A6J30_14180 PF13375 RnfC Barrel sandwich hybrid domain A6J30_14185 PF04060 Putative Fe-S cluster A6J30_14190 PF02508 Rnf-Nqr subunit, membrane protein A6J30_14205 PF12344 Ultra-violet resistance protein B A6J30_14205 PF02151 UvrB/uvrC motif A6J30_14205 PF04851 Type III restriction enzyme, res subunit A6J30_14205 PF00271 Helicase conserved C-terminal domain A6J30_14205 PF17757 UvrB interaction domain A6J30_14210 PF00072 Response regulator receiver domain A6J30_14210 PF02954 Bacterial regulatory protein, Fis family A6J30_14210 PF00158 Sigma-54 interaction domain A6J30_14215 PF01627 Hpt domain A6J30_14220 PF01933 Uncharacterised protein family UPF0052 A6J30_14225 PF06463 Molybdenum Cofactor Synthesis C A6J30_14225 PF04055 Radical SAM superfamily A6J30_14230 PF00994 Probable molybdopterin binding domain A6J30_14235 PF01967 MoaC family A6J30_14240 PF02597 ThiS family A6J30_14245 PF02391 MoaE protein A6J30_14250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_14255 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_14260 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_14260 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J30_14265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_14265 PF00005 ABC transporter A6J30_14270 PF00005 ABC transporter A6J30_14270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_14275 PF13409 Glutathione S-transferase, N-terminal domain A6J30_14285 PF13194 Domain of unknown function (DUF4010) A6J30_14290 PF01515 Phosphate acetyl/butaryl transferase A6J30_14290 PF07085 DRTGG domain A6J30_14295 PF00871 Acetokinase family A6J30_14300 PF04217 Protein of unknown function, DUF412 A6J30_14310 PF02653 Branched-chain amino acid transport system / permease component A6J30_14315 PF00005 ABC transporter A6J30_14320 PF00128 Alpha amylase, catalytic domain A6J30_14320 PF02903 Alpha amylase, N-terminal ig-like domain A6J30_14325 PF00990 Diguanylate cyclase, GGDEF domain A6J30_14325 PF00072 Response regulator receiver domain A6J30_14330 PF01207 Dihydrouridine synthase (Dus) A6J30_14335 PF07517 SecA DEAD-like domain A6J30_14335 PF01043 SecA preprotein cross-linking domain A6J30_14335 PF02810 SEC-C motif A6J30_14335 PF07516 SecA Wing and Scaffold domain A6J30_14340 PF02600 Disulfide bond formation protein DsbB A6J30_14345 PF06450 Bacterial Na+/H+ antiporter B (NhaB) A6J30_14350 PF00392 Bacterial regulatory proteins, gntR family A6J30_14350 PF07840 FadR C-terminal domain A6J30_14360 PF09334 tRNA synthetases class I (M) A6J30_14360 PF01588 Putative tRNA binding domain A6J30_14365 PF10609 NUBPL iron-transfer P-loop NTPase A6J30_14370 PF00485 Phosphoribulokinase / Uridine kinase family A6J30_14380 PF12557 Cob(I)alamin adenosyltransferase N terminal A6J30_14380 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A6J30_14385 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6J30_14390 PF00916 Sulfate permease family A6J30_14390 PF01740 STAS domain A6J30_14400 PF00575 S1 RNA binding domain A6J30_14400 PF10150 Ribonuclease E/G family A6J30_14400 PF12111 Polyribonucleotide phosphorylase C terminal A6J30_14410 PF01479 S4 domain A6J30_14410 PF00849 RNA pseudouridylate synthase A6J30_14415 PF02545 Maf-like protein A6J30_14420 PF02620 Large ribosomal RNA subunit accumulation protein YceD A6J30_14425 PF01783 Ribosomal L32p protein family A6J30_14430 PF02504 Fatty acid synthesis protein A6J30_14435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6J30_14435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6J30_14440 PF00698 Acyl transferase domain A6J30_14450 PF00550 Phosphopantetheine attachment site A6J30_14455 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J30_14455 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J30_14460 PF01063 Amino-transferase class IV A6J30_14465 PF02618 YceG-like family A6J30_14470 PF02223 Thymidylate kinase A6J30_14475 PF09115 DNA polymerase III, delta subunit, C terminal A6J30_14480 PF01026 TatD related DNase A6J30_14485 PF02378 Phosphotransferase system, EIIC A6J30_14485 PF00367 phosphotransferase system, EIIB A6J30_14500 PF00209 Sodium:neurotransmitter symporter family A6J30_14515 PF01734 Patatin-like phospholipase A6J30_14520 PF02887 Pyruvate kinase, alpha/beta domain A6J30_14520 PF00224 Pyruvate kinase, barrel domain A6J30_14525 PF00480 ROK family A6J30_14530 PF01584 CheW-like domain A6J30_14530 PF00072 Response regulator receiver domain A6J30_14535 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6J30_14535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6J30_14535 PF01336 OB-fold nucleic acid binding domain A6J30_14535 PF14579 Helix-hairpin-helix motif A6J30_14535 PF02811 PHP domain A6J30_14550 PF00106 short chain dehydrogenase A6J30_14555 PF01343 Peptidase family S49 A6J30_14555 PF08496 Peptidase family S49 N-terminal A6J30_14560 PF02224 Cytidylate kinase A6J30_14565 PF00575 S1 RNA binding domain A6J30_14570 PF00216 Bacterial DNA-binding protein A6J30_14575 PF06305 Lipopolysaccharide assembly protein A domain A6J30_14580 PF18073 Rubredoxin metal binding domain A6J30_14585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6J30_14590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_14600 PF01370 NAD dependent epimerase/dehydratase family A6J30_14605 PF00535 Glycosyl transferase family 2 A6J30_14615 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase A6J30_14625 PF02470 MlaD protein A6J30_14630 PF04403 Paraquat-inducible protein A A6J30_14635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6J30_14640 PF00034 Cytochrome c A6J30_14645 PF01568 Molydopterin dinucleotide binding domain A6J30_14645 PF00384 Molybdopterin oxidoreductase A6J30_14645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_14650 PF03916 Polysulphide reductase, NrfD A6J30_14655 PF13247 4Fe-4S dicluster domain A6J30_14660 PF00512 His Kinase A (phospho-acceptor) domain A6J30_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_14665 PF00072 Response regulator receiver domain A6J30_14665 PF00196 Bacterial regulatory proteins, luxR family A6J30_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_14670 PF03466 LysR substrate binding domain A6J30_14680 PF11412 Disulphide bond corrector protein DsbC A6J30_14680 PF02683 Cytochrome C biogenesis protein transmembrane region A6J30_14685 PF00085 Thioredoxin A6J30_14700 PF01938 TRAM domain A6J30_14700 PF05958 tRNA (Uracil-5-)-methyltransferase A6J30_14715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_14725 PF12704 MacB-like periplasmic core domain A6J30_14725 PF02687 FtsX-like permease family A6J30_14725 PF00005 ABC transporter A6J30_14730 PF12704 MacB-like periplasmic core domain A6J30_14730 PF02687 FtsX-like permease family A6J30_14730 PF00005 ABC transporter A6J30_14735 PF00005 ABC transporter A6J30_14735 PF02687 FtsX-like permease family A6J30_14735 PF12704 MacB-like periplasmic core domain A6J30_14740 PF00857 Isochorismatase family A6J30_14745 PF12833 Helix-turn-helix domain A6J30_14745 PF02311 AraC-like ligand binding domain A6J30_14755 PF01717 Cobalamin-independent synthase, Catalytic domain A6J30_14755 PF08267 Cobalamin-independent synthase, N-terminal domain A6J30_14765 PF00529 HlyD membrane-fusion protein of T1SS A6J30_14765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_14770 PF03466 LysR substrate binding domain A6J30_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_14790 PF00512 His Kinase A (phospho-acceptor) domain A6J30_14790 PF00672 HAMP domain A6J30_14795 PF00486 Transcriptional regulatory protein, C terminal A6J30_14795 PF00072 Response regulator receiver domain A6J30_14800 PF00672 HAMP domain A6J30_14800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_14805 PF11842 Domain of unknown function (DUF3362) A6J30_14805 PF04055 Radical SAM superfamily A6J30_14805 PF08497 Radical SAM N-terminal A6J30_14810 PF00990 Diguanylate cyclase, GGDEF domain A6J30_14810 PF01590 GAF domain A6J30_14810 PF00563 EAL domain A6J30_14810 PF00360 Phytochrome region A6J30_14830 PF03466 LysR substrate binding domain A6J30_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_14840 PF01717 Cobalamin-independent synthase, Catalytic domain A6J30_14840 PF08267 Cobalamin-independent synthase, N-terminal domain A6J30_14850 PF03795 YCII-related domain A6J30_14855 PF03061 Thioesterase superfamily A6J30_14860 PF04279 Intracellular septation protein A A6J30_14870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_14870 PF00072 Response regulator receiver domain A6J30_14875 PF17327 Acyl homoserine lactone synthase A6J30_14880 PF00375 Sodium:dicarboxylate symporter family A6J30_14885 PF13193 AMP-binding enzyme C-terminal domain A6J30_14885 PF00501 AMP-binding enzyme A6J30_14890 PF00027 Cyclic nucleotide-binding domain A6J30_14890 PF13545 Crp-like helix-turn-helix domain A6J30_14895 PF00290 Tryptophan synthase alpha chain A6J30_14900 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_14905 PF00218 Indole-3-glycerol phosphate synthase A6J30_14905 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A6J30_14910 PF02885 Glycosyl transferase family, helical bundle domain A6J30_14910 PF00591 Glycosyl transferase family, a/b domain A6J30_14915 PF00117 Glutamine amidotransferase class-I A6J30_14920 PF04715 Anthranilate synthase component I, N terminal region A6J30_14920 PF00425 chorismate binding enzyme A6J30_14925 PF08056 Tryptophan operon leader peptide A6J30_14930 PF02811 PHP domain A6J30_14935 PF01300 Telomere recombination A6J30_14945 PF01479 S4 domain A6J30_14945 PF00849 RNA pseudouridylate synthase A6J30_14950 PF04269 Protein of unknown function, DUF440 A6J30_14955 PF08207 Elongation factor P (EF-P) KOW-like domain A6J30_14955 PF09285 Elongation factor P, C-terminal A6J30_14955 PF01132 Elongation factor P (EF-P) OB domain A6J30_14965 PF03104 DNA polymerase family B, exonuclease domain A6J30_14965 PF00136 DNA polymerase family B A6J30_14970 PF00072 Response regulator receiver domain A6J30_14970 PF00196 Bacterial regulatory proteins, luxR family A6J30_14975 PF01541 GIY-YIG catalytic domain A6J30_14975 PF08459 UvrC Helix-hairpin-helix N-terminal A6J30_14975 PF02151 UvrB/uvrC motif A6J30_14980 PF01066 CDP-alcohol phosphatidyltransferase A6J30_15010 PF00202 Aminotransferase class-III A6J30_15015 PF03435 Saccharopine dehydrogenase NADP binding domain A6J30_15015 PF16653 Saccharopine dehydrogenase C-terminal domain A6J30_15020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6J30_15035 PF00994 Probable molybdopterin binding domain A6J30_15045 PF00268 Ribonucleotide reductase, small chain A6J30_15050 PF03477 ATP cone domain A6J30_15050 PF02867 Ribonucleotide reductase, barrel domain A6J30_15050 PF00317 Ribonucleotide reductase, all-alpha domain A6J30_15065 PF03989 DNA gyrase C-terminal domain, beta-propeller A6J30_15065 PF00521 DNA gyrase/topoisomerase IV, subunit A A6J30_15080 PF02335 Cytochrome c552 A6J30_15090 PF13247 4Fe-4S dicluster domain A6J30_15095 PF03916 Polysulphide reductase, NrfD A6J30_15100 PF01578 Cytochrome C assembly protein A6J30_15100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6J30_15105 PF08534 Redoxin A6J30_15110 PF03918 Cytochrome C biogenesis protein A6J30_15120 PF00925 GTP cyclohydrolase II A6J30_15145 PF01471 Putative peptidoglycan binding domain A6J30_15145 PF03734 L,D-transpeptidase catalytic domain A6J30_15150 PF05951 Bacterial protein of unknown function (DUF882) A6J30_15155 PF00753 Metallo-beta-lactamase superfamily A6J30_15170 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J30_15180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J30_15185 PF07730 Histidine kinase A6J30_15185 PF17200 Single Cache domain 2 A6J30_15190 PF00072 Response regulator receiver domain A6J30_15190 PF00196 Bacterial regulatory proteins, luxR family A6J30_15195 PF01047 MarR family A6J30_15200 PF02028 BCCT, betaine/carnitine/choline family transporter A6J30_15205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_15205 PF00672 HAMP domain A6J30_15225 PF00155 Aminotransferase class I and II A6J30_15240 PF00155 Aminotransferase class I and II A6J30_15240 PF00392 Bacterial regulatory proteins, gntR family A6J30_15250 PF01336 OB-fold nucleic acid binding domain A6J30_15250 PF00152 tRNA synthetases class II (D, K and N) A6J30_15255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_15255 PF00672 HAMP domain A6J30_15255 PF12729 Four helix bundle sensory module for signal transduction A6J30_15270 PF08461 Ribonuclease R winged-helix domain A6J30_15270 PF08206 Ribonuclease B OB domain A6J30_15270 PF00773 RNB domain A6J30_15270 PF00575 S1 RNA binding domain A6J30_15270 PF17876 Cold shock domain A6J30_15275 PF00313 'Cold-shock' DNA-binding domain A6J30_15305 PF01242 6-pyruvoyl tetrahydropterin synthase A6J30_15315 PF00563 EAL domain A6J30_15315 PF04940 Sensors of blue-light using FAD A6J30_15320 PF03313 Serine dehydratase alpha chain A6J30_15320 PF03315 Serine dehydratase beta chain A6J30_15325 PF03222 Tryptophan/tyrosine permease family A6J30_15330 PF00293 NUDIX domain A6J30_15340 PF09308 LuxQ, periplasmic A6J30_15340 PF00512 His Kinase A (phospho-acceptor) domain A6J30_15340 PF00072 Response regulator receiver domain A6J30_15340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_15345 PF00425 chorismate binding enzyme A6J30_15345 PF04715 Anthranilate synthase component I, N terminal region A6J30_15360 PF04317 YcjX-like family, DUF463 A6J30_15365 PF05128 Domain of unknown function (DUF697) A6J30_15370 PF00158 Sigma-54 interaction domain A6J30_15370 PF18024 Helix-turn-helix domain A6J30_15375 PF13302 Acetyltransferase (GNAT) domain A6J30_15390 PF13495 Phage integrase, N-terminal SAM-like domain A6J30_15390 PF00589 Phage integrase family A6J30_15395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_15650 PF13091 PLD-like domain A6J30_15685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system A6J30_15690 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system A6J30_15750 PF13676 TIR domain A6J30_15790 PF01588 Putative tRNA binding domain A6J30_15865 PF01042 Endoribonuclease L-PSP A6J30_15945 PF03553 Na+/H+ antiporter family A6J30_15950 PF00120 Glutamine synthetase, catalytic domain A6J30_15960 PF07722 Peptidase C26 A6J30_15965 PF01381 Helix-turn-helix A6J30_15965 PF07883 Cupin domain A6J30_15970 PF00171 Aldehyde dehydrogenase family A6J30_15975 PF01266 FAD dependent oxidoreductase A6J30_15980 PF00795 Carbon-nitrogen hydrolase A6J30_15985 PF04371 Porphyromonas-type peptidyl-arginine deiminase A6J30_15990 PF00171 Aldehyde dehydrogenase family A6J30_15995 PF00202 Aminotransferase class-III A6J30_16000 PF01368 DHH family A6J30_16000 PF02833 DHHA2 domain A6J30_16005 PF00563 EAL domain A6J30_16005 PF00196 Bacterial regulatory proteins, luxR family A6J30_16020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6J30_16020 PF01411 tRNA synthetases class II (A) A6J30_16020 PF02272 DHHA1 domain A6J30_16025 PF12833 Helix-turn-helix domain A6J30_16035 PF01047 MarR family A6J30_16040 PF04237 YjbR A6J30_16050 PF01928 CYTH domain A6J30_16060 PF12464 Maltose acetyltransferase A6J30_16060 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_16075 PF00672 HAMP domain A6J30_16075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J30_16075 PF01627 Hpt domain A6J30_16075 PF00512 His Kinase A (phospho-acceptor) domain A6J30_16075 PF00072 Response regulator receiver domain A6J30_16085 PF12805 FUSC-like inner membrane protein yccS A6J30_16120 PF07715 TonB-dependent Receptor Plug Domain A6J30_16120 PF00593 TonB dependent receptor A6J30_16135 PF13411 MerR HTH family regulatory protein A6J30_16140 PF00005 ABC transporter A6J30_16145 PF01032 FecCD transport family A6J30_16150 PF01032 FecCD transport family A6J30_16155 PF01497 Periplasmic binding protein A6J30_16175 PF04314 Copper chaperone PCu(A)C A6J30_16180 PF00012 Hsp70 protein A6J30_16195 PF00676 Dehydrogenase E1 component A6J30_16200 PF02779 Transketolase, pyrimidine binding domain A6J30_16200 PF02780 Transketolase, C-terminal domain A6J30_16205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6J30_16205 PF02817 e3 binding domain A6J30_16205 PF00364 Biotin-requiring enzyme A6J30_16215 PF00043 Glutathione S-transferase, C-terminal domain A6J30_16215 PF02798 Glutathione S-transferase, N-terminal domain A6J30_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_16220 PF03466 LysR substrate binding domain A6J30_16230 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_16235 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_16240 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_16245 PF00005 ABC transporter A6J30_16250 PF08031 Berberine and berberine like A6J30_16250 PF01565 FAD binding domain A6J30_16255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J30_16265 PF01040 UbiA prenyltransferase family A6J30_16275 PF00510 Cytochrome c oxidase subunit III A6J30_16280 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6J30_16285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A6J30_16285 PF06481 COX Aromatic Rich Motif A6J30_16295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6J30_16295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J30_16300 PF00378 Enoyl-CoA hydratase/isomerase A6J30_16305 PF00378 Enoyl-CoA hydratase/isomerase A6J30_16315 PF00171 Aldehyde dehydrogenase family A6J30_16320 PF00108 Thiolase, N-terminal domain A6J30_16320 PF02803 Thiolase, C-terminal domain A6J30_16325 PF00376 MerR family regulatory protein A6J30_16325 PF09278 MerR, DNA binding A6J30_16330 PF02770 Acyl-CoA dehydrogenase, middle domain A6J30_16330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J30_16330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J30_16335 PF01039 Carboxyl transferase domain A6J30_16340 PF00378 Enoyl-CoA hydratase/isomerase A6J30_16345 PF00682 HMGL-like A6J30_16350 PF10063 Uncharacterized integral membrane protein (DUF2301) A6J30_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16360 PF08447 PAS fold A6J30_16360 PF13426 PAS domain A6J30_16365 PF00871 Acetokinase family A6J30_16375 PF13426 PAS domain A6J30_16375 PF00990 Diguanylate cyclase, GGDEF domain A6J30_16375 PF00563 EAL domain A6J30_16380 PF03880 DbpA RNA binding domain A6J30_16380 PF00270 DEAD/DEAH box helicase A6J30_16380 PF00271 Helicase conserved C-terminal domain A6J30_16385 PF08206 Ribonuclease B OB domain A6J30_16385 PF00575 S1 RNA binding domain A6J30_16385 PF00773 RNB domain A6J30_16390 PF12833 Helix-turn-helix domain A6J30_16400 PF12849 PBP superfamily domain A6J30_16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_16415 PF03466 LysR substrate binding domain A6J30_16420 PF13186 Iron-sulfur cluster-binding domain A6J30_16420 PF04055 Radical SAM superfamily A6J30_16425 PF00884 Sulfatase A6J30_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_16430 PF03466 LysR substrate binding domain A6J30_16440 PF12729 Four helix bundle sensory module for signal transduction A6J30_16440 PF00672 HAMP domain A6J30_16440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16445 PF00005 ABC transporter A6J30_16450 PF00563 EAL domain A6J30_16450 PF12792 CSS motif domain associated with EAL A6J30_16470 PF00270 DEAD/DEAH box helicase A6J30_16470 PF00271 Helicase conserved C-terminal domain A6J30_16475 PF07683 Cobalamin synthesis protein cobW C-terminal domain A6J30_16475 PF02492 CobW/HypB/UreG, nucleotide-binding domain A6J30_16485 PF01470 Pyroglutamyl peptidase A6J30_16495 PF00291 Pyridoxal-phosphate dependent enzyme A6J30_16500 PF09905 DNA-binding protein VF530 A6J30_16505 PF00271 Helicase conserved C-terminal domain A6J30_16505 PF00270 DEAD/DEAH box helicase A6J30_16510 PF12843 Putative quorum-sensing-regulated virulence factor A6J30_16530 PF01329 Pterin 4 alpha carbinolamine dehydratase A6J30_16535 PF00351 Biopterin-dependent aromatic amino acid hydroxylase A6J30_16540 PF00501 AMP-binding enzyme A6J30_16540 PF13193 AMP-binding enzyme C-terminal domain A6J30_16550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_16550 PF03466 LysR substrate binding domain A6J30_16570 PF00892 EamA-like transporter family A6J30_16585 PF00465 Iron-containing alcohol dehydrogenase A6J30_16590 PF07995 Glucose / Sorbosone dehydrogenase A6J30_16600 PF00210 Ferritin-like domain A6J30_16605 PF00672 HAMP domain A6J30_16605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16605 PF17200 Single Cache domain 2 A6J30_16615 PF12704 MacB-like periplasmic core domain A6J30_16615 PF02687 FtsX-like permease family A6J30_16615 PF00005 ABC transporter A6J30_16620 PF00005 ABC transporter A6J30_16620 PF02687 FtsX-like permease family A6J30_16620 PF12704 MacB-like periplasmic core domain A6J30_16635 PF00990 Diguanylate cyclase, GGDEF domain A6J30_16645 PF08447 PAS fold A6J30_16645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16645 PF13426 PAS domain A6J30_16650 PF03889 Alternative ribosome-rescue factor A A6J30_16655 PF00313 'Cold-shock' DNA-binding domain A6J30_16685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J30_16685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J30_16690 PF01040 UbiA prenyltransferase family A6J30_16695 PF02628 Cytochrome oxidase assembly protein A6J30_16715 PF00510 Cytochrome c oxidase subunit III A6J30_16720 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 A6J30_16725 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6J30_16730 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A6J30_16730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A6J30_16735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J30_16735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J30_16735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J30_16735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J30_16745 PF01810 LysE type translocator A6J30_16750 PF12833 Helix-turn-helix domain A6J30_16765 PF01557 Fumarylacetoacetate (FAA) hydrolase family A6J30_16780 PF00892 EamA-like transporter family A6J30_16805 PF07690 Major Facilitator Superfamily A6J30_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_16810 PF03466 LysR substrate binding domain A6J30_16815 PF08447 PAS fold A6J30_16815 PF08448 PAS fold A6J30_16815 PF00990 Diguanylate cyclase, GGDEF domain A6J30_16815 PF00563 EAL domain A6J30_16820 PF08525 Opacity-associated protein A N-terminal motif A6J30_16820 PF01476 LysM domain A6J30_16820 PF01551 Peptidase family M23 A6J30_16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16845 PF00672 HAMP domain A6J30_16845 PF02743 Cache domain A6J30_16855 PF03222 Tryptophan/tyrosine permease family A6J30_16890 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_16890 PF00107 Zinc-binding dehydrogenase A6J30_16895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_16895 PF02378 Phosphotransferase system, EIIC A6J30_16900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_16920 PF01758 Sodium Bile acid symporter family A6J30_16930 PF01161 Phosphatidylethanolamine-binding protein A6J30_16935 PF02567 Phenazine biosynthesis-like protein A6J30_16940 PF10282 Lactonase, 7-bladed beta-propeller A6J30_16950 PF00672 HAMP domain A6J30_16950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_16960 PF00005 ABC transporter A6J30_16980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_16980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6J30_16980 PF00384 Molybdopterin oxidoreductase A6J30_16980 PF12838 4Fe-4S dicluster domain A6J30_16980 PF01568 Molydopterin dinucleotide binding domain A6J30_17005 PF00873 AcrB/AcrD/AcrF family A6J30_17025 PF13185 GAF domain A6J30_17025 PF00990 Diguanylate cyclase, GGDEF domain A6J30_17035 PF13302 Acetyltransferase (GNAT) domain A6J30_17045 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J30_17050 PF00873 AcrB/AcrD/AcrF family A6J30_17055 PF13533 Biotin-lipoyl like A6J30_17065 PF00326 Prolyl oligopeptidase family A6J30_17065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6J30_17070 PF12848 ABC transporter A6J30_17070 PF16326 ABC transporter C-terminal domain A6J30_17070 PF00005 ABC transporter A6J30_17075 PF00582 Universal stress protein family A6J30_17080 PF02525 Flavodoxin-like fold A6J30_17085 PF02254 TrkA-N domain A6J30_17085 PF00999 Sodium/hydrogen exchanger family A6J30_17100 PF00128 Alpha amylase, catalytic domain A6J30_17110 PF08453 Peptidase family M9 N-terminal A6J30_17110 PF01752 Collagenase A6J30_17110 PF04151 Bacterial pre-peptidase C-terminal domain A6J30_17125 PF03466 LysR substrate binding domain A6J30_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17135 PF00210 Ferritin-like domain A6J30_17140 PF00141 Peroxidase A6J30_17160 PF00082 Subtilase family A6J30_17215 PF00075 RNase H A6J30_17235 PF02796 Helix-turn-helix domain of resolvase A6J30_17235 PF00239 Resolvase, N terminal domain A6J30_17245 PF00239 Resolvase, N terminal domain A6J30_17245 PF13408 Recombinase zinc beta ribbon domain A6J30_17245 PF07508 Recombinase A6J30_17260 PF01584 CheW-like domain A6J30_17260 PF00072 Response regulator receiver domain A6J30_17270 PF01243 Pyridoxamine 5'-phosphate oxidase A6J30_17275 PF06228 Haem utilisation ChuX/HutX A6J30_17280 PF04055 Radical SAM superfamily A6J30_17285 PF03544 Gram-negative bacterial TonB protein C-terminal A6J30_17290 PF01618 MotA/TolQ/ExbB proton channel family A6J30_17295 PF02472 Biopolymer transport protein ExbD/TolR A6J30_17305 PF01032 FecCD transport family A6J30_17310 PF00005 ABC transporter A6J30_17355 PF01467 Cytidylyltransferase-like A6J30_17360 PF02540 NAD synthase A6J30_17365 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_17365 PF03473 MOSC domain A6J30_17365 PF03476 MOSC N-terminal beta barrel domain A6J30_17365 PF03476 MOSC N-terminal beta barrel domain A6J30_17365 PF03473 MOSC domain A6J30_17365 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J30_17375 PF01679 Proteolipid membrane potential modulator A6J30_17385 PF01979 Amidohydrolase family A6J30_17390 PF05661 Protein of unknown function (DUF808) A6J30_17420 PF12833 Helix-turn-helix domain A6J30_17420 PF01497 Periplasmic binding protein A6J30_17425 PF00155 Aminotransferase class I and II A6J30_17450 PF00535 Glycosyl transferase family 2 A6J30_17465 PF00270 DEAD/DEAH box helicase A6J30_17465 PF00271 Helicase conserved C-terminal domain A6J30_17475 PF03466 LysR substrate binding domain A6J30_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17480 PF03466 LysR substrate binding domain A6J30_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J30_17495 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_17495 PF00107 Zinc-binding dehydrogenase A6J30_17510 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A6J30_17510 PF12833 Helix-turn-helix domain A6J30_17520 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) A6J30_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17535 PF03466 LysR substrate binding domain A6J30_17545 PF17763 Glutaminase/Asparaginase C-terminal domain A6J30_17545 PF00710 Asparaginase, N-terminal A6J30_17550 PF03618 Kinase/pyrophosphorylase A6J30_17555 PF00391 PEP-utilising enzyme, mobile domain A6J30_17555 PF02896 PEP-utilising enzyme, TIM barrel domain A6J30_17555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A6J30_17570 PF00579 tRNA synthetases class I (W and Y) A6J30_17575 PF13416 Bacterial extracellular solute-binding protein A6J30_17585 PF03466 LysR substrate binding domain A6J30_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17590 PF13533 Biotin-lipoyl like A6J30_17595 PF00873 AcrB/AcrD/AcrF family A6J30_17610 PF00990 Diguanylate cyclase, GGDEF domain A6J30_17610 PF07694 5TMR of 5TMR-LYT A6J30_17620 PF00196 Bacterial regulatory proteins, luxR family A6J30_17625 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 A6J30_17625 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6J30_17625 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6J30_17625 PF00703 Glycosyl hydrolases family 2 A6J30_17630 PF02028 BCCT, betaine/carnitine/choline family transporter A6J30_17635 PF00392 Bacterial regulatory proteins, gntR family A6J30_17635 PF07702 UTRA domain A6J30_17660 PF00005 ABC transporter A6J30_17660 PF08402 TOBE domain A6J30_17690 PF00873 AcrB/AcrD/AcrF family A6J30_17695 PF13533 Biotin-lipoyl like A6J30_17705 PF13091 PLD-like domain A6J30_17735 PF09278 MerR, DNA binding A6J30_17735 PF00376 MerR family regulatory protein A6J30_17750 PF03466 LysR substrate binding domain A6J30_17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17760 PF13378 Enolase C-terminal domain-like A6J30_17760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A6J30_17770 PF00009 Elongation factor Tu GTP binding domain A6J30_17770 PF00679 Elongation factor G C-terminus A6J30_17770 PF03144 Elongation factor Tu domain 2 A6J30_17770 PF14492 Elongation Factor G, domain II A6J30_17770 PF03764 Elongation factor G, domain IV A6J30_17795 PF02001 Protein of unknown function DUF134 A6J30_17805 PF17185 NlpE C-terminal OB domain A6J30_17805 PF04170 NlpE N-terminal domain A6J30_17810 PF06629 MltA-interacting protein MipA A6J30_17820 PF00691 OmpA family A6J30_17820 PF01389 OmpA-like transmembrane domain A6J30_17825 PF03466 LysR substrate binding domain A6J30_17825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A6J30_17850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A6J30_17860 PF00857 Isochorismatase family A6J30_17870 PF00199 Catalase A6J30_17870 PF06628 Catalase-related immune-responsive A6J30_17880 PF08220 DeoR-like helix-turn-helix domain A6J30_17880 PF00455 DeoR C terminal sensor domain A6J30_17885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_17890 PF01625 Peptide methionine sulfoxide reductase A6J30_17890 PF01641 SelR domain A6J30_17900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17900 PF03466 LysR substrate binding domain A6J30_17915 PF03060 Nitronate monooxygenase A6J30_17920 PF00149 Calcineurin-like phosphoesterase A6J30_17920 PF02872 5'-nucleotidase, C-terminal domain A6J30_17930 PF08359 YsiA-like protein, C-terminal region A6J30_17930 PF00440 Bacterial regulatory proteins, tetR family A6J30_17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_17945 PF03466 LysR substrate binding domain A6J30_17950 PF01810 LysE type translocator A6J30_17965 PF00118 TCP-1/cpn60 chaperonin family A6J30_17970 PF00166 Chaperonin 10 Kd subunit A6J30_17975 PF00581 Rhodanese-like domain A6J30_18005 PF01070 FMN-dependent dehydrogenase A6J30_18025 PF00669 Bacterial flagellin N-terminal helical region A6J30_18030 PF00460 Flagella basal body rod protein A6J30_18030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_18035 PF10135 Rod binding protein A6J30_18035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A6J30_18040 PF02119 Flagellar P-ring protein A6J30_18045 PF02107 Flagellar L-ring protein A6J30_18050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_18050 PF00460 Flagella basal body rod protein A6J30_18055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_18055 PF00460 Flagella basal body rod protein A6J30_18060 PF07559 Flagellar basal body protein FlaE A6J30_18060 PF00460 Flagella basal body rod protein A6J30_18060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_18065 PF13860 FlgD Ig-like domain A6J30_18065 PF13861 FlgD Tudor-like domain A6J30_18065 PF03963 Flagellar hook capping protein - N-terminal region A6J30_18070 PF00460 Flagella basal body rod protein A6J30_18070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J30_18075 PF00460 Flagella basal body rod protein A6J30_18095 PF01464 Transglycosylase SLT domain A6J30_18100 PF00133 tRNA synthetases class I (I, L, M and V) A6J30_18100 PF08264 Anticodon-binding domain of tRNA A6J30_18120 PF03313 Serine dehydratase alpha chain A6J30_18120 PF03315 Serine dehydratase beta chain A6J30_18125 PF00854 POT family A6J30_18135 PF03466 LysR substrate binding domain A6J30_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18145 PF03466 LysR substrate binding domain A6J30_18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18150 PF00691 OmpA family A6J30_18150 PF01389 OmpA-like transmembrane domain A6J30_18155 PF00246 Zinc carboxypeptidase A6J30_18155 PF18027 Cytosolic carboxypeptidase N-terminal domain A6J30_18160 PF01266 FAD dependent oxidoreductase A6J30_18170 PF04393 Protein of unknown function (DUF535) A6J30_18185 PF00392 Bacterial regulatory proteins, gntR family A6J30_18185 PF07702 UTRA domain A6J30_18190 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_18195 PF00005 ABC transporter A6J30_18210 PF00266 Aminotransferase class-V A6J30_18220 PF13419 Haloacid dehalogenase-like hydrolase A6J30_18225 PF00356 Bacterial regulatory proteins, lacI family A6J30_18230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_18240 PF03611 PTS system sugar-specific permease component A6J30_18255 PF00657 GDSL-like Lipase/Acylhydrolase A6J30_18260 PF02321 Outer membrane efflux protein A6J30_18265 PF00005 ABC transporter A6J30_18265 PF02687 FtsX-like permease family A6J30_18265 PF12704 MacB-like periplasmic core domain A6J30_18270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_18275 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J30_18280 PF00194 Eukaryotic-type carbonic anhydrase A6J30_18285 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A6J30_18300 PF13419 Haloacid dehalogenase-like hydrolase A6J30_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18305 PF03466 LysR substrate binding domain A6J30_18340 PF14602 Hexapeptide repeat of succinyl-transferase A6J30_18340 PF12464 Maltose acetyltransferase A6J30_18345 PF02566 OsmC-like protein A6J30_18350 PF01641 SelR domain A6J30_18350 PF01625 Peptide methionine sulfoxide reductase A6J30_18360 PF00919 Uncharacterized protein family UPF0004 A6J30_18360 PF04055 Radical SAM superfamily A6J30_18365 PF04244 Deoxyribodipyrimidine photo-lyase-related protein A6J30_18370 PF03441 FAD binding domain of DNA photolyase A6J30_18370 PF00875 DNA photolyase A6J30_18375 PF00990 Diguanylate cyclase, GGDEF domain A6J30_18390 PF12729 Four helix bundle sensory module for signal transduction A6J30_18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_18390 PF00672 HAMP domain A6J30_18395 PF05230 MASE2 domain A6J30_18395 PF00990 Diguanylate cyclase, GGDEF domain A6J30_18400 PF13532 2OG-Fe(II) oxygenase superfamily A6J30_18410 PF01773 Na+ dependent nucleoside transporter N-terminus A6J30_18410 PF07662 Na+ dependent nucleoside transporter C-terminus A6J30_18410 PF07670 Nucleoside recognition A6J30_18425 PF01212 Beta-eliminating lyase A6J30_18435 PF01266 FAD dependent oxidoreductase A6J30_18450 PF05525 Branched-chain amino acid transport protein A6J30_18455 PF05230 MASE2 domain A6J30_18455 PF00990 Diguanylate cyclase, GGDEF domain A6J30_18460 PF00158 Sigma-54 interaction domain A6J30_18460 PF02954 Bacterial regulatory protein, Fis family A6J30_18460 PF00072 Response regulator receiver domain A6J30_18465 PF00512 His Kinase A (phospho-acceptor) domain A6J30_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_18465 PF02743 Cache domain A6J30_18475 PF00232 Glycosyl hydrolase family 1 A6J30_18500 PF03466 LysR substrate binding domain A6J30_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18510 PF08443 RimK-like ATP-grasp domain A6J30_18510 PF18030 RimK PreATP-grasp domain A6J30_18515 PF18030 RimK PreATP-grasp domain A6J30_18515 PF08443 RimK-like ATP-grasp domain A6J30_18520 PF00753 Metallo-beta-lactamase superfamily A6J30_18525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6J30_18525 PF17944 Arginine decarboxylase C-terminal helical extension A6J30_18525 PF17810 Arginine decarboxylase helical bundle domain A6J30_18530 PF00491 Arginase family A6J30_18535 PF07690 Major Facilitator Superfamily A6J30_18540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6J30_18540 PF00326 Prolyl oligopeptidase family A6J30_18555 PF00950 ABC 3 transport family A6J30_18560 PF00005 ABC transporter A6J30_18565 PF01297 Zinc-uptake complex component A periplasmic A6J30_18605 PF02472 Biopolymer transport protein ExbD/TolR A6J30_18610 PF01618 MotA/TolQ/ExbB proton channel family A6J30_18615 PF01618 MotA/TolQ/ExbB proton channel family A6J30_18625 PF07715 TonB-dependent Receptor Plug Domain A6J30_18625 PF00593 TonB dependent receptor A6J30_18630 PF00512 His Kinase A (phospho-acceptor) domain A6J30_18630 PF16750 Sensor domain of 2-component histidine kinase A6J30_18630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_18630 PF00672 HAMP domain A6J30_18635 PF00486 Transcriptional regulatory protein, C terminal A6J30_18635 PF00072 Response regulator receiver domain A6J30_18645 PF03009 Glycerophosphoryl diester phosphodiesterase family A6J30_18655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J30_18655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J30_18660 PF10928 Protein of unknown function (DUF2810) A6J30_18710 PF04013 Putative SAM-dependent RNA methyltransferase A6J30_18715 PF01523 Putative modulator of DNA gyrase A6J30_18720 PF01523 Putative modulator of DNA gyrase A6J30_18725 PF08543 Phosphomethylpyrimidine kinase A6J30_18730 PF00005 ABC transporter A6J30_18735 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_18740 PF09084 NMT1/THI5 like A6J30_18745 PF03070 TENA/THI-4/PQQC family A6J30_18750 PF02110 Hydroxyethylthiazole kinase family A6J30_18755 PF02581 Thiamine monophosphate synthase A6J30_18765 PF01568 Molydopterin dinucleotide binding domain A6J30_18765 PF00384 Molybdopterin oxidoreductase A6J30_18765 PF18364 Molybdopterin oxidoreductase N-terminal domain A6J30_18770 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J30_18795 PF00583 Acetyltransferase (GNAT) family A6J30_18815 PF00392 Bacterial regulatory proteins, gntR family A6J30_18815 PF00155 Aminotransferase class I and II A6J30_18820 PF02595 Glycerate kinase family A6J30_18825 PF02447 GntP family permease A6J30_18830 PF13556 PucR C-terminal helix-turn-helix domain A6J30_18830 PF17853 GGDEF-like domain A6J30_18830 PF05651 Putative sugar diacid recognition A6J30_18855 PF13419 Haloacid dehalogenase-like hydrolase A6J30_18870 PF03466 LysR substrate binding domain A6J30_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_18880 PF03466 LysR substrate binding domain A6J30_18885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_18890 PF01661 Macro domain A6J30_18895 PF01204 Trehalase A6J30_18905 PF12706 Beta-lactamase superfamily domain A6J30_18915 PF07690 Major Facilitator Superfamily A6J30_18920 PF13533 Biotin-lipoyl like A6J30_18925 PF03922 OmpW family A6J30_18930 PF13599 Pentapeptide repeats (9 copies) A6J30_18945 PF18416 N-acetylglucosamine binding protein domain 2 A6J30_18945 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading A6J30_18950 PF01037 Lrp/AsnC ligand binding domain A6J30_18955 PF01810 LysE type translocator A6J30_18960 PF04954 Siderophore-interacting protein A6J30_18960 PF08021 Siderophore-interacting FAD-binding domain A6J30_18965 PF14583 Oligogalacturonate lyase A6J30_18970 PF00474 Sodium:solute symporter family A6J30_18975 PF13229 Right handed beta helix region A6J30_18990 PF01081 KDPG and KHG aldolase A6J30_18995 PF00294 pfkB family carbohydrate kinase A6J30_19010 PF07883 Cupin domain A6J30_19015 PF10688 Bacterial inner membrane protein A6J30_19025 PF01614 Bacterial transcriptional regulator A6J30_19025 PF09339 IclR helix-turn-helix domain A6J30_19040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19040 PF03466 LysR substrate binding domain A6J30_19045 PF00797 N-acetyltransferase A6J30_19050 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_19050 PF00107 Zinc-binding dehydrogenase A6J30_19055 PF00756 Putative esterase A6J30_19065 PF00990 Diguanylate cyclase, GGDEF domain A6J30_19065 PF17152 Periplasmic sensor domain A6J30_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19080 PF03466 LysR substrate binding domain A6J30_19095 PF00849 RNA pseudouridylate synthase A6J30_19100 PF01554 MatE A6J30_19110 PF00990 Diguanylate cyclase, GGDEF domain A6J30_19110 PF00563 EAL domain A6J30_19120 PF06865 Pyrimidine/purine nucleoside phosphorylase A6J30_19130 PF00704 Glycosyl hydrolases family 18 A6J30_19130 PF08329 Chitinase A, N-terminal domain A6J30_19150 PF03600 Citrate transporter A6J30_19160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A6J30_19175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A6J30_19175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6J30_19180 PF06029 AlkA N-terminal domain A6J30_19180 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J30_19190 PF07681 DoxX A6J30_19195 PF17954 Quercetinase C-terminal cupin domain A6J30_19195 PF02678 Pirin A6J30_19200 PF03466 LysR substrate binding domain A6J30_19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6J30_19230 PF03616 Sodium/glutamate symporter A6J30_19235 PF00155 Aminotransferase class I and II A6J30_19235 PF00392 Bacterial regulatory proteins, gntR family A6J30_19240 PF00005 ABC transporter A6J30_19250 PF03616 Sodium/glutamate symporter A6J30_19260 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_19275 PF00672 HAMP domain A6J30_19275 PF17200 Single Cache domain 2 A6J30_19275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_19280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6J30_19290 PF04397 LytTr DNA-binding domain A6J30_19290 PF00072 Response regulator receiver domain A6J30_19295 PF07694 5TMR of 5TMR-LYT A6J30_19295 PF13492 GAF domain A6J30_19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_19295 PF06580 Histidine kinase A6J30_19315 PF00005 ABC transporter A6J30_19330 PF01098 Cell cycle protein A6J30_19335 PF01709 Transcriptional regulator A6J30_19345 PF00672 HAMP domain A6J30_19345 PF17149 Periplasmic sensor domain found in signal transduction proteins A6J30_19345 PF01627 Hpt domain A6J30_19345 PF00072 Response regulator receiver domain A6J30_19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_19345 PF00512 His Kinase A (phospho-acceptor) domain A6J30_19355 PF00925 GTP cyclohydrolase II A6J30_19355 PF08719 Domain of unknown function (DUF1768) A6J30_19365 PF00005 ABC transporter A6J30_19365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_19370 PF00005 ABC transporter A6J30_19370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_19390 PF13614 AAA domain A6J30_19390 PF18607 ParA helix turn helix domain A6J30_19395 PF02195 ParB-like nuclease domain A6J30_19395 PF08775 ParB family A6J30_19400 PF05127 Helicase A6J30_19400 PF13718 GNAT acetyltransferase 2 A6J30_19410 PF00132 Bacterial transferase hexapeptide (six repeats) A6J30_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19415 PF03466 LysR substrate binding domain A6J30_19420 PF03575 Peptidase family S51 A6J30_19425 PF00267 Gram-negative porin A6J30_19430 PF02378 Phosphotransferase system, EIIC A6J30_19430 PF00367 phosphotransferase system, EIIB A6J30_19435 PF01380 SIS domain A6J30_19440 PF01380 SIS domain A6J30_19440 PF01418 Helix-turn-helix domain, rpiR family A6J30_19445 PF00246 Zinc carboxypeptidase A6J30_19450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_19455 PF03358 NADPH-dependent FMN reductase A6J30_19465 PF00664 ABC transporter transmembrane region A6J30_19465 PF00005 ABC transporter A6J30_19465 PF03412 Peptidase C39 family A6J30_19480 PF00529 HlyD membrane-fusion protein of T1SS A6J30_19485 PF02954 Bacterial regulatory protein, Fis family A6J30_19485 PF00072 Response regulator receiver domain A6J30_19485 PF00158 Sigma-54 interaction domain A6J30_19490 PF00512 His Kinase A (phospho-acceptor) domain A6J30_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_19490 PF02743 Cache domain A6J30_19495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A6J30_19495 PF01243 Pyridoxamine 5'-phosphate oxidase A6J30_19510 PF12833 Helix-turn-helix domain A6J30_19515 PF00171 Aldehyde dehydrogenase family A6J30_19515 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A6J30_19515 PF14850 DNA-binding domain of Proline dehydrogenase A6J30_19515 PF01619 Proline dehydrogenase A6J30_19525 PF00474 Sodium:solute symporter family A6J30_19560 PF01037 Lrp/AsnC ligand binding domain A6J30_19570 PF00664 ABC transporter transmembrane region A6J30_19570 PF00005 ABC transporter A6J30_19580 PF06719 AraC-type transcriptional regulator N-terminus A6J30_19580 PF12833 Helix-turn-helix domain A6J30_19600 PF10688 Bacterial inner membrane protein A6J30_19605 PF01081 KDPG and KHG aldolase A6J30_19610 PF00294 pfkB family carbohydrate kinase A6J30_19615 PF02614 Glucuronate isomerase A6J30_19620 PF01232 Mannitol dehydrogenase Rossmann domain A6J30_19620 PF08125 Mannitol dehydrogenase C-terminal domain A6J30_19625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J30_19630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6J30_19635 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J30_19640 PF00392 Bacterial regulatory proteins, gntR family A6J30_19640 PF07729 FCD domain A6J30_19645 PF03786 D-mannonate dehydratase (UxuA) A6J30_19650 PF00270 DEAD/DEAH box helicase A6J30_19650 PF00271 Helicase conserved C-terminal domain A6J30_19655 PF03475 3-alpha domain A6J30_19655 PF03473 MOSC domain A6J30_19670 PF02056 Family 4 glycosyl hydrolase A6J30_19670 PF11975 Family 4 glycosyl hydrolase C-terminal domain A6J30_19675 PF03466 LysR substrate binding domain A6J30_19675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19680 PF12729 Four helix bundle sensory module for signal transduction A6J30_19680 PF00672 HAMP domain A6J30_19680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_19695 PF08281 Sigma-70, region 4 A6J30_19695 PF04542 Sigma-70 region 2 A6J30_19700 PF12833 Helix-turn-helix domain A6J30_19700 PF01965 DJ-1/PfpI family A6J30_19705 PF03466 LysR substrate binding domain A6J30_19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_19725 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_19725 PF13192 Thioredoxin domain A6J30_19730 PF10417 C-terminal domain of 1-Cys peroxiredoxin A6J30_19730 PF00578 AhpC/TSA family A6J30_19735 PF01047 MarR family A6J30_19740 PF02566 OsmC-like protein A6J30_19755 PF12833 Helix-turn-helix domain A6J30_19755 PF02311 AraC-like ligand binding domain A6J30_19765 PF11762 L-arabinose isomerase C-terminal domain A6J30_19765 PF02610 L-arabinose isomerase A6J30_19770 PF00596 Class II Aldolase and Adducin N-terminal domain A6J30_19775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6J30_19775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6J30_19780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J30_19785 PF00005 ABC transporter A6J30_19790 PF02653 Branched-chain amino acid transport system / permease component A6J30_19805 PF00367 phosphotransferase system, EIIB A6J30_19805 PF02378 Phosphotransferase system, EIIC A6J30_19810 PF00486 Transcriptional regulatory protein, C terminal A6J30_19810 PF00072 Response regulator receiver domain A6J30_19815 PF00512 His Kinase A (phospho-acceptor) domain A6J30_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_19815 PF08521 Two-component sensor kinase N-terminal A6J30_19820 PF01547 Bacterial extracellular solute-binding protein A6J30_19825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6J30_19825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6J30_19830 PF06276 Ferric iron reductase FhuF-like transporter A6J30_19830 PF04183 IucA / IucC family A6J30_19840 PF06276 Ferric iron reductase FhuF-like transporter A6J30_19840 PF04183 IucA / IucC family A6J30_19845 PF00206 Lyase A6J30_19845 PF02655 ATP-grasp domain A6J30_19850 PF07715 TonB-dependent Receptor Plug Domain A6J30_19850 PF00593 TonB dependent receptor A6J30_19855 PF00593 TonB dependent receptor A6J30_19855 PF07660 Secretin and TonB N terminus short domain A6J30_19855 PF07715 TonB-dependent Receptor Plug Domain A6J30_19860 PF01497 Periplasmic binding protein A6J30_19865 PF01032 FecCD transport family A6J30_19870 PF01032 FecCD transport family A6J30_19875 PF00005 ABC transporter A6J30_19880 PF00672 HAMP domain A6J30_19880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_19885 PF00675 Insulinase (Peptidase family M16) A6J30_19885 PF05193 Peptidase M16 inactive domain A6J30_19895 PF01551 Peptidase family M23 A6J30_19895 PF04225 Opacity-associated protein A LysM-like domain A6J30_19905 PF07690 Major Facilitator Superfamily A6J30_19915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6J30_19915 PF00128 Alpha amylase, catalytic domain A6J30_19920 PF02264 LamB porin A6J30_19935 PF02903 Alpha amylase, N-terminal ig-like domain A6J30_19935 PF16657 Maltogenic Amylase, C-terminal domain A6J30_19935 PF00128 Alpha amylase, catalytic domain A6J30_19940 PF04231 Endonuclease I A6J30_19945 PF17967 Pullulanase N2 domain A6J30_19945 PF18494 Pullulanase Ins domain A6J30_19945 PF03714 Bacterial pullanase-associated domain A6J30_19945 PF11852 Domain of unknown function (DUF3372) A6J30_19945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6J30_19960 PF01276 Orn/Lys/Arg decarboxylase, major domain A6J30_19960 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A6J30_19960 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A6J30_19965 PF13520 Amino acid permease A6J30_19975 PF08543 Phosphomethylpyrimidine kinase A6J30_19985 PF00375 Sodium:dicarboxylate symporter family A6J30_19990 PF03193 RsgA GTPase A6J30_19995 PF00367 phosphotransferase system, EIIB A6J30_19995 PF02378 Phosphotransferase system, EIIC A6J30_20005 PF02630 SCO1/SenC A6J30_20020 PF17874 MalT-like TPR region A6J30_20020 PF00196 Bacterial regulatory proteins, luxR family A6J30_20030 PF00343 Carbohydrate phosphorylase A6J30_20035 PF02446 4-alpha-glucanotransferase A6J30_20040 PF02806 Alpha amylase, C-terminal all-beta domain A6J30_20040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6J30_20040 PF00128 Alpha amylase, catalytic domain A6J30_20045 PF00912 Transglycosylase A6J30_20050 PF00128 Alpha amylase, catalytic domain A6J30_20065 PF07670 Nucleoside recognition A6J30_20070 PF07670 Nucleoside recognition A6J30_20075 PF01546 Peptidase family M20/M25/M40 A6J30_20075 PF07687 Peptidase dimerisation domain A6J30_20080 PF06803 Protein of unknown function (DUF1232) A6J30_20085 PF00375 Sodium:dicarboxylate symporter family A6J30_20095 PF03466 LysR substrate binding domain A6J30_20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20100 PF08803 Putative mono-oxygenase ydhR A6J30_20110 PF02706 Chain length determinant protein A6J30_20110 PF13807 G-rich domain on putative tyrosine kinase A6J30_20110 PF13614 AAA domain A6J30_20115 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6J30_20120 PF02563 Polysaccharide biosynthesis/export protein A6J30_20120 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A6J30_20120 PF10531 SLBB domain A6J30_20125 PF00881 Nitroreductase family A6J30_20130 PF01914 MarC family integral membrane protein A6J30_20135 PF01734 Patatin-like phospholipase A6J30_20140 PF18416 N-acetylglucosamine binding protein domain 2 A6J30_20140 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading A6J30_20155 PF00561 alpha/beta hydrolase fold A6J30_20160 PF07943 Penicillin-binding protein 5, C-terminal domain A6J30_20160 PF00768 D-alanyl-D-alanine carboxypeptidase A6J30_20165 PF00128 Alpha amylase, catalytic domain A6J30_20165 PF00686 Starch binding domain A6J30_20170 PF12833 Helix-turn-helix domain A6J30_20170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A6J30_20175 PF00881 Nitroreductase family A6J30_20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20185 PF03466 LysR substrate binding domain A6J30_20190 PF09905 DNA-binding protein VF530 A6J30_20200 PF00175 Oxidoreductase NAD-binding domain A6J30_20200 PF00970 Oxidoreductase FAD-binding domain A6J30_20210 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6J30_20215 PF01594 AI-2E family transporter A6J30_20225 PF13533 Biotin-lipoyl like A6J30_20250 PF00892 EamA-like transporter family A6J30_20255 PF03466 LysR substrate binding domain A6J30_20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20260 PF07690 Major Facilitator Superfamily A6J30_20275 PF00583 Acetyltransferase (GNAT) family A6J30_20285 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6J30_20290 PF04055 Radical SAM superfamily A6J30_20330 PF08000 Bacterial PH domain A6J30_20340 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6J30_20340 PF00691 OmpA family A6J30_20345 PF01618 MotA/TolQ/ExbB proton channel family A6J30_20350 PF04542 Sigma-70 region 2 A6J30_20350 PF04545 Sigma-70, region 4 A6J30_20355 PF03748 Flagellar basal body-associated protein FliL A6J30_20370 PF02561 Flagellar protein FliS A6J30_20375 PF07196 Flagellin hook IN motif A6J30_20375 PF02465 Flagellar hook-associated protein 2 N-terminus A6J30_20375 PF07195 Flagellar hook-associated protein 2 C-terminus A6J30_20385 PF00669 Bacterial flagellin N-terminal helical region A6J30_20385 PF00700 Bacterial flagellin C-terminal helical region A6J30_20395 PF00771 FHIPEP family A6J30_20400 PF01312 FlhB HrpN YscU SpaS Family A6J30_20405 PF01311 Bacterial export proteins, family 1 A6J30_20410 PF01313 Bacterial export proteins, family 3 A6J30_20415 PF00813 FliP family A6J30_20420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J30_20435 PF00072 Response regulator receiver domain A6J30_20435 PF02954 Bacterial regulatory protein, Fis family A6J30_20435 PF00158 Sigma-54 interaction domain A6J30_20440 PF02049 Flagellar hook-basal body complex protein FliE A6J30_20445 PF01514 Secretory protein of YscJ/FliF family A6J30_20445 PF08345 Flagellar M-ring protein C-terminal A6J30_20450 PF14841 FliG middle domain A6J30_20450 PF14842 FliG N-terminal domain A6J30_20450 PF01706 FliG C-terminal domain A6J30_20460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_20460 PF18269 T3SS EscN ATPase C-terminal domain A6J30_20475 PF03466 LysR substrate binding domain A6J30_20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_20515 PF03466 LysR substrate binding domain A6J30_20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20540 PF00486 Transcriptional regulatory protein, C terminal A6J30_20540 PF00072 Response regulator receiver domain A6J30_20545 PF08448 PAS fold A6J30_20545 PF00072 Response regulator receiver domain A6J30_20545 PF00512 His Kinase A (phospho-acceptor) domain A6J30_20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_20545 PF13426 PAS domain A6J30_20550 PF00080 Copper/zinc superoxide dismutase (SODC) A6J30_20555 PF00266 Aminotransferase class-V A6J30_20560 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_20565 PF00563 EAL domain A6J30_20565 PF00990 Diguanylate cyclase, GGDEF domain A6J30_20565 PF03707 Bacterial signalling protein N terminal repeat A6J30_20570 PF00155 Aminotransferase class I and II A6J30_20575 PF08240 Alcohol dehydrogenase GroES-like domain A6J30_20575 PF00107 Zinc-binding dehydrogenase A6J30_20605 PF00194 Eukaryotic-type carbonic anhydrase A6J30_20610 PF00924 Mechanosensitive ion channel A6J30_20620 PF01070 FMN-dependent dehydrogenase A6J30_20625 PF02652 L-lactate permease A6J30_20630 PF03466 LysR substrate binding domain A6J30_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_20635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6J30_20635 PF00326 Prolyl oligopeptidase family A6J30_20640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J30_20640 PF00005 ABC transporter A6J30_20650 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J30_20650 PF13654 AAA domain A6J30_20655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_20655 PF00672 HAMP domain A6J30_20660 PF07238 PilZ domain A6J30_20660 PF12945 Flagellar protein YcgR A6J30_20675 PF00583 Acetyltransferase (GNAT) family A6J30_20680 PF12800 4Fe-4S binding domain A6J30_20680 PF12838 4Fe-4S dicluster domain A6J30_20685 PF13237 4Fe-4S dicluster domain A6J30_20685 PF12801 4Fe-4S binding domain A6J30_20700 PF00005 ABC transporter A6J30_20700 PF12558 ATP-binding cassette cobalt transporter A6J30_20705 PF07155 ECF-type riboflavin transporter, S component A6J30_20710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_20710 PF00529 HlyD membrane-fusion protein of T1SS A6J30_20715 PF11742 Protein of unknown function (DUF3302) A6J30_20720 PF00990 Diguanylate cyclase, GGDEF domain A6J30_20735 PF01048 Phosphorylase superfamily A6J30_20740 PF08349 Protein of unknown function (DUF1722) A6J30_20745 PF13411 MerR HTH family regulatory protein A6J30_20750 PF03441 FAD binding domain of DNA photolyase A6J30_20750 PF00875 DNA photolyase A6J30_20755 PF17969 L,D-transpeptidase C-terminal domain A6J30_20755 PF03734 L,D-transpeptidase catalytic domain A6J30_20755 PF01476 LysM domain A6J30_20765 PF00270 DEAD/DEAH box helicase A6J30_20765 PF00271 Helicase conserved C-terminal domain A6J30_20770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6J30_20770 PF00326 Prolyl oligopeptidase family A6J30_20775 PF00593 TonB dependent receptor A6J30_20775 PF07715 TonB-dependent Receptor Plug Domain A6J30_20795 PF00672 HAMP domain A6J30_20795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_20800 PF12849 PBP superfamily domain A6J30_20805 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_20810 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_20815 PF00005 ABC transporter A6J30_20830 PF13519 von Willebrand factor type A domain A6J30_20835 PF13519 von Willebrand factor type A domain A6J30_20845 PF01882 Protein of unknown function DUF58 A6J30_20850 PF07726 ATPase family associated with various cellular activities (AAA) A6J30_20850 PF17863 AAA lid domain A6J30_20855 PF02743 Cache domain A6J30_20855 PF00672 HAMP domain A6J30_20855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_20865 PF00196 Bacterial regulatory proteins, luxR family A6J30_20870 PF00196 Bacterial regulatory proteins, luxR family A6J30_20880 PF00005 ABC transporter A6J30_20880 PF00664 ABC transporter transmembrane region A6J30_20885 PF00529 HlyD membrane-fusion protein of T1SS A6J30_20900 PF00691 OmpA family A6J30_20910 PF01032 FecCD transport family A6J30_20915 PF01497 Periplasmic binding protein A6J30_20920 PF00005 ABC transporter A6J30_20925 PF07715 TonB-dependent Receptor Plug Domain A6J30_20925 PF00593 TonB dependent receptor A6J30_20930 PF00005 ABC transporter A6J30_20930 PF00664 ABC transporter transmembrane region A6J30_20935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_20935 PF00512 His Kinase A (phospho-acceptor) domain A6J30_20935 PF00989 PAS fold A6J30_20935 PF16736 Single Cache-like A6J30_20940 PF00486 Transcriptional regulatory protein, C terminal A6J30_20940 PF00072 Response regulator receiver domain A6J30_20945 PF02254 TrkA-N domain A6J30_20945 PF02080 TrkA-C domain A6J30_20950 PF02386 Cation transport protein A6J30_20955 PF00563 EAL domain A6J30_20955 PF00990 Diguanylate cyclase, GGDEF domain A6J30_20955 PF03707 Bacterial signalling protein N terminal repeat A6J30_20960 PF00127 Copper binding proteins, plastocyanin/azurin family A6J30_20965 PF13419 Haloacid dehalogenase-like hydrolase A6J30_20975 PF01238 Phosphomannose isomerase type I A6J30_20980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_20980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_20985 PF12833 Helix-turn-helix domain A6J30_20995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_21005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J30_21005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6J30_21010 PF06628 Catalase-related immune-responsive A6J30_21010 PF00199 Catalase A6J30_21015 PF13417 Glutathione S-transferase, N-terminal domain A6J30_21020 PF16884 N-terminal domain of oxidoreductase A6J30_21020 PF00107 Zinc-binding dehydrogenase A6J30_21025 PF00440 Bacterial regulatory proteins, tetR family A6J30_21025 PF16925 Tetracyclin repressor-like, C-terminal domain A6J30_21060 PF00534 Glycosyl transferases group 1 A6J30_21060 PF13439 Glycosyltransferase Family 4 A6J30_21070 PF02706 Chain length determinant protein A6J30_21070 PF13614 AAA domain A6J30_21070 PF13807 G-rich domain on putative tyrosine kinase A6J30_21085 PF02397 Bacterial sugar transferase A6J30_21090 PF00005 ABC transporter A6J30_21090 PF08402 TOBE domain A6J30_21100 PF01547 Bacterial extracellular solute-binding protein A6J30_21105 PF14785 Maltose transport system permease protein MalF P2 domain A6J30_21105 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_21110 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_21220 PF03347 Vibrio thermostable direct hemolysin A6J30_21235 PF13322 Domain of unknown function (DUF4092) A6J30_21235 PF17291 N-terminal domain of M60-like peptidases A6J30_21235 PF13402 Peptidase M60, enhancin and enhancin-like A6J30_21350 PF00771 FHIPEP family A6J30_21355 PF01312 FlhB HrpN YscU SpaS Family A6J30_21360 PF00691 OmpA family A6J30_21385 PF00486 Transcriptional regulatory protein, C terminal A6J30_21420 PF00813 FliP family A6J30_21440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J30_21440 PF18269 T3SS EscN ATPase C-terminal domain A6J30_21440 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J30_21520 PF12792 CSS motif domain associated with EAL A6J30_21520 PF00563 EAL domain A6J30_21560 PF13737 Transposase DDE domain A6J30_21570 PF03347 Vibrio thermostable direct hemolysin A6J30_21660 PF01872 RibD C-terminal domain A6J30_21665 PF00440 Bacterial regulatory proteins, tetR family A6J30_21665 PF02909 Tetracyclin repressor-like, C-terminal domain A6J30_21670 PF02798 Glutathione S-transferase, N-terminal domain A6J30_21685 PF07943 Penicillin-binding protein 5, C-terminal domain A6J30_21685 PF00768 D-alanyl-D-alanine carboxypeptidase A6J30_21700 PF00462 Glutaredoxin A6J30_21700 PF08534 Redoxin A6J30_21705 PF00962 Adenosine/AMP deaminase A6J30_21720 PF00313 'Cold-shock' DNA-binding domain A6J30_21730 PF01734 Patatin-like phospholipase A6J30_21740 PF01047 MarR family A6J30_21755 PF07690 Major Facilitator Superfamily A6J30_21765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6J30_21770 PF00884 Sulfatase A6J30_21770 PF08019 Phosphoethanolamine transferase EptA/EptB A6J30_21775 PF01219 Prokaryotic diacylglycerol kinase A6J30_21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_21785 PF00512 His Kinase A (phospho-acceptor) domain A6J30_21785 PF00672 HAMP domain A6J30_21790 PF00486 Transcriptional regulatory protein, C terminal A6J30_21790 PF00072 Response regulator receiver domain A6J30_21795 PF00106 short chain dehydrogenase A6J30_21810 PF01323 DSBA-like thioredoxin domain A6J30_21835 PF14490 Helix-hairpin-helix containing domain A6J30_21835 PF13538 UvrD-like helicase C-terminal domain A6J30_21835 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain A6J30_21840 PF01320 Colicin immunity protein / pyocin immunity protein A6J30_21845 PF06958 S-type Pyocin A6J30_21895 PF02371 Transposase IS116/IS110/IS902 family A6J30_21895 PF01548 Transposase A6J30_21910 PF00255 Glutathione peroxidase A6J30_21915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6J30_21925 PF07690 Major Facilitator Superfamily A6J30_21935 PF01966 HD domain A6J30_21945 PF07969 Amidohydrolase family A6J30_21950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A6J30_21955 PF00571 CBS domain A6J30_21955 PF01769 Divalent cation transporter A6J30_21955 PF03448 MgtE intracellular N domain A6J30_21960 PF03109 ABC1 family A6J30_21970 PF00155 Aminotransferase class I and II A6J30_21970 PF00392 Bacterial regulatory proteins, gntR family A6J30_21975 PF13520 Amino acid permease A6J30_21980 PF13404 AsnC-type helix-turn-helix domain A6J30_21980 PF01037 Lrp/AsnC ligand binding domain A6J30_21985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_21985 PF03466 LysR substrate binding domain A6J30_22000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J30_22000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J30_22005 PF00672 HAMP domain A6J30_22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_22005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J30_22005 PF01627 Hpt domain A6J30_22005 PF00072 Response regulator receiver domain A6J30_22005 PF00512 His Kinase A (phospho-acceptor) domain A6J30_22010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6J30_22015 PF01554 MatE A6J30_22020 PF04363 Protein of unknown function (DUF496) A6J30_22030 PF04337 Protein of unknown function, DUF480 A6J30_22035 PF01541 GIY-YIG catalytic domain A6J30_22040 PF13407 Periplasmic binding protein domain A6J30_22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_22045 PF00512 His Kinase A (phospho-acceptor) domain A6J30_22045 PF09308 LuxQ, periplasmic A6J30_22045 PF00072 Response regulator receiver domain A6J30_22055 PF00529 HlyD membrane-fusion protein of T1SS A6J30_22055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_22075 PF01037 Lrp/AsnC ligand binding domain A6J30_22105 PF07549 SecD/SecF GG Motif A6J30_22105 PF13721 SecD export protein N-terminal TM region A6J30_22105 PF02355 Protein export membrane protein A6J30_22110 PF07549 SecD/SecF GG Motif A6J30_22110 PF02355 Protein export membrane protein A6J30_22120 PF01810 LysE type translocator A6J30_22125 PF00106 short chain dehydrogenase A6J30_22130 PF00108 Thiolase, N-terminal domain A6J30_22130 PF02803 Thiolase, C-terminal domain A6J30_22140 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus A6J30_22140 PF00561 alpha/beta hydrolase fold A6J30_22150 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J30_22155 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) A6J30_22160 PF00384 Molybdopterin oxidoreductase A6J30_22160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_22160 PF01568 Molydopterin dinucleotide binding domain A6J30_22170 PF12838 4Fe-4S dicluster domain A6J30_22170 PF13187 4Fe-4S dicluster domain A6J30_22175 PF07730 Histidine kinase A6J30_22175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_22175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A6J30_22175 PF00672 HAMP domain A6J30_22180 PF00072 Response regulator receiver domain A6J30_22180 PF00196 Bacterial regulatory proteins, luxR family A6J30_22195 PF01546 Peptidase family M20/M25/M40 A6J30_22195 PF07687 Peptidase dimerisation domain A6J30_22200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J30_22205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_22210 PF00873 AcrB/AcrD/AcrF family A6J30_22215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_22215 PF12729 Four helix bundle sensory module for signal transduction A6J30_22215 PF00672 HAMP domain A6J30_22220 PF00472 RF-1 domain A6J30_22225 PF13419 Haloacid dehalogenase-like hydrolase A6J30_22230 PF01389 OmpA-like transmembrane domain A6J30_22230 PF00691 OmpA family A6J30_22235 PF00793 DAHP synthetase I family A6J30_22240 PF07690 Major Facilitator Superfamily A6J30_22245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_22245 PF08447 PAS fold A6J30_22250 PF00456 Transketolase, thiamine diphosphate binding domain A6J30_22250 PF02780 Transketolase, C-terminal domain A6J30_22250 PF02779 Transketolase, pyrimidine binding domain A6J30_22255 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6J30_22275 PF00704 Glycosyl hydrolases family 18 A6J30_22275 PF08329 Chitinase A, N-terminal domain A6J30_22280 PF00990 Diguanylate cyclase, GGDEF domain A6J30_22280 PF03707 Bacterial signalling protein N terminal repeat A6J30_22280 PF00563 EAL domain A6J30_22285 PF00581 Rhodanese-like domain A6J30_22300 PF00899 ThiF family A6J30_22305 PF00994 Probable molybdopterin binding domain A6J30_22305 PF03454 MoeA C-terminal region (domain IV) A6J30_22305 PF03453 MoeA N-terminal region (domain I and II) A6J30_22310 PF01227 GTP cyclohydrolase I A6J30_22315 PF01566 Natural resistance-associated macrophage protein A6J30_22325 PF00654 Voltage gated chloride channel A6J30_22340 PF00248 Aldo/keto reductase family A6J30_22345 PF00072 Response regulator receiver domain A6J30_22355 PF03853 YjeF-related protein N-terminus A6J30_22355 PF01256 Carbohydrate kinase A6J30_22360 PF00478 IMP dehydrogenase / GMP reductase domain A6J30_22365 PF13193 AMP-binding enzyme C-terminal domain A6J30_22365 PF00501 AMP-binding enzyme A6J30_22370 PF01012 Electron transfer flavoprotein domain A6J30_22370 PF00766 Electron transfer flavoprotein FAD-binding domain A6J30_22375 PF01012 Electron transfer flavoprotein domain A6J30_22390 PF00005 ABC transporter A6J30_22390 PF12399 Branched-chain amino acid ATP-binding cassette transporter A6J30_22415 PF00005 ABC transporter A6J30_22420 PF14535 AMP-binding enzyme C-terminal domain A6J30_22420 PF00501 AMP-binding enzyme A6J30_22425 PF05724 Thiopurine S-methyltransferase (TPMT) A6J30_22435 PF00034 Cytochrome c A6J30_22445 PF13411 MerR HTH family regulatory protein A6J30_22450 PF02627 Carboxymuconolactone decarboxylase family A6J30_22455 PF02567 Phenazine biosynthesis-like protein A6J30_22465 PF02322 Cytochrome bd terminal oxidase subunit II A6J30_22470 PF01654 Cytochrome bd terminal oxidase subunit I A6J30_22475 PF00392 Bacterial regulatory proteins, gntR family A6J30_22475 PF00155 Aminotransferase class I and II A6J30_22480 PF12464 Maltose acetyltransferase A6J30_22480 PF14602 Hexapeptide repeat of succinyl-transferase A6J30_22485 PF12794 Mechanosensitive ion channel inner membrane domain 1 A6J30_22485 PF12795 Mechanosensitive ion channel porin domain A6J30_22485 PF00924 Mechanosensitive ion channel A6J30_22500 PF00512 His Kinase A (phospho-acceptor) domain A6J30_22500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_22500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J30_22500 PF00072 Response regulator receiver domain A6J30_22500 PF01627 Hpt domain A6J30_22500 PF00672 HAMP domain A6J30_22505 PF00682 HMGL-like A6J30_22510 PF00289 Biotin carboxylase, N-terminal domain A6J30_22510 PF00364 Biotin-requiring enzyme A6J30_22510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6J30_22510 PF02785 Biotin carboxylase C-terminal domain A6J30_22515 PF00378 Enoyl-CoA hydratase/isomerase A6J30_22520 PF01039 Carboxyl transferase domain A6J30_22525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J30_22525 PF02770 Acyl-CoA dehydrogenase, middle domain A6J30_22525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J30_22530 PF09278 MerR, DNA binding A6J30_22530 PF00376 MerR family regulatory protein A6J30_22535 PF02803 Thiolase, C-terminal domain A6J30_22535 PF00108 Thiolase, N-terminal domain A6J30_22540 PF00171 Aldehyde dehydrogenase family A6J30_22545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J30_22545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J30_22545 PF02770 Acyl-CoA dehydrogenase, middle domain A6J30_22550 PF00378 Enoyl-CoA hydratase/isomerase A6J30_22560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6J30_22560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J30_22575 PF17151 Periplasmic sensor domain A6J30_22575 PF00990 Diguanylate cyclase, GGDEF domain A6J30_22580 PF13977 BetI-type transcriptional repressor, C-terminal A6J30_22580 PF00440 Bacterial regulatory proteins, tetR family A6J30_22585 PF00171 Aldehyde dehydrogenase family A6J30_22590 PF05199 GMC oxidoreductase A6J30_22590 PF00732 GMC oxidoreductase A6J30_22595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A6J30_22600 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_22605 PF00571 CBS domain A6J30_22605 PF00005 ABC transporter A6J30_22610 PF00881 Nitroreductase family A6J30_22620 PF01145 SPFH domain / Band 7 family A6J30_22620 PF16200 C-terminal region of band_7 A6J30_22630 PF13188 PAS domain A6J30_22630 PF03707 Bacterial signalling protein N terminal repeat A6J30_22630 PF00990 Diguanylate cyclase, GGDEF domain A6J30_22630 PF00563 EAL domain A6J30_22635 PF03150 Di-haem cytochrome c peroxidase A6J30_22635 PF00034 Cytochrome c A6J30_22640 PF00072 Response regulator receiver domain A6J30_22640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_22640 PF00512 His Kinase A (phospho-acceptor) domain A6J30_22640 PF09308 LuxQ, periplasmic A6J30_22655 PF04116 Fatty acid hydroxylase superfamily A6J30_22700 PF01048 Phosphorylase superfamily A6J30_22705 PF00563 EAL domain A6J30_22705 PF00990 Diguanylate cyclase, GGDEF domain A6J30_22710 PF05025 RbsD / FucU transport protein family A6J30_22715 PF00005 ABC transporter A6J30_22720 PF02653 Branched-chain amino acid transport system / permease component A6J30_22725 PF13407 Periplasmic binding protein domain A6J30_22730 PF00294 pfkB family carbohydrate kinase A6J30_22735 PF00356 Bacterial regulatory proteins, lacI family A6J30_22745 PF04973 Nicotinamide mononucleotide transporter A6J30_22750 PF01048 Phosphorylase superfamily A6J30_22770 PF00072 Response regulator receiver domain A6J30_22770 PF00486 Transcriptional regulatory protein, C terminal A6J30_22785 PF00245 Alkaline phosphatase A6J30_22795 PF01483 Proprotein convertase P-domain A6J30_22795 PF00082 Subtilase family A6J30_22805 PF00990 Diguanylate cyclase, GGDEF domain A6J30_22805 PF00072 Response regulator receiver domain A6J30_22815 PF03222 Tryptophan/tyrosine permease family A6J30_22825 PF00384 Molybdopterin oxidoreductase A6J30_22825 PF01568 Molydopterin dinucleotide binding domain A6J30_22825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J30_22830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J30_22830 PF14824 Sirohaem biosynthesis protein central A6J30_22830 PF10414 Sirohaem synthase dimerisation region A6J30_22835 PF00591 Glycosyl transferase family, a/b domain A6J30_22835 PF02885 Glycosyl transferase family, helical bundle domain A6J30_22840 PF01738 Dienelactone hydrolase family A6J30_22845 PF08376 Nitrate and nitrite sensing A6J30_22845 PF03861 ANTAR domain A6J30_22860 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_22865 PF00005 ABC transporter A6J30_22870 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_22870 PF13806 Rieske-like [2Fe-2S] domain A6J30_22870 PF04324 BFD-like [2Fe-2S] binding domain A6J30_22870 PF18267 Rubredoxin NAD+ reductase C-terminal domain A6J30_22870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6J30_22870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6J30_22885 PF08361 MAATS-type transcriptional repressor, C-terminal region A6J30_22885 PF00440 Bacterial regulatory proteins, tetR family A6J30_22900 PF00211 Adenylate and Guanylate cyclase catalytic domain A6J30_22900 PF00072 Response regulator receiver domain A6J30_22920 PF03793 PASTA domain A6J30_22920 PF00069 Protein kinase domain A6J30_22945 PF00691 OmpA family A6J30_22945 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6J30_23005 PF00004 ATPase family associated with various cellular activities (AAA) A6J30_23005 PF17871 AAA lid domain A6J30_23005 PF10431 C-terminal, D2-small domain, of ClpB protein A6J30_23005 PF07724 AAA domain (Cdc48 subfamily) A6J30_23015 PF04717 Type VI secretion system, phage-baseplate injector A6J30_23015 PF16671 Actin cross-linking domain A6J30_23030 PF00149 Calcineurin-like phosphoesterase A6J30_23030 PF12320 Type 5 capsule protein repressor C-terminal domain A6J30_23035 PF13476 AAA domain A6J30_23055 PF08212 Lipocalin-like domain A6J30_23065 PF07690 Major Facilitator Superfamily A6J30_23075 PF03606 C4-dicarboxylate anaerobic carrier A6J30_23080 PF00034 Cytochrome c A6J30_23085 PF01212 Beta-eliminating lyase A6J30_23095 PF12592 Protein of unknown function (DUF3763) A6J30_23095 PF17868 AAA lid domain A6J30_23095 PF07728 AAA domain (dynein-related subfamily) A6J30_23100 PF05762 VWA domain containing CoxE-like protein A6J30_23115 PF03466 LysR substrate binding domain A6J30_23115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_23120 PF09330 D-lactate dehydrogenase, membrane binding A6J30_23120 PF01565 FAD binding domain A6J30_23140 PF01168 Alanine racemase, N-terminal domain A6J30_23140 PF00842 Alanine racemase, C-terminal domain A6J30_23145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_23145 PF00672 HAMP domain A6J30_23160 PF09154 Domain of unknown function (DUF1939) A6J30_23160 PF00128 Alpha amylase, catalytic domain A6J30_23180 PF06965 Na+/H+ antiporter 1 A6J30_23180 PF13462 Thioredoxin A6J30_23225 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J30_23225 PF14760 Rnk N-terminus A6J30_23230 PF04324 BFD-like [2Fe-2S] binding domain A6J30_23230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6J30_23230 PF18267 Rubredoxin NAD+ reductase C-terminal domain A6J30_23230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6J30_23230 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_23235 PF13806 Rieske-like [2Fe-2S] domain A6J30_23240 PF01226 Formate/nitrite transporter A6J30_23245 PF14824 Sirohaem biosynthesis protein central A6J30_23245 PF10414 Sirohaem synthase dimerisation region A6J30_23245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J30_23260 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6J30_23275 PF00593 TonB dependent receptor A6J30_23275 PF07715 TonB-dependent Receptor Plug Domain A6J30_23290 PF11756 Nitrous oxide-stimulated promoter A6J30_23295 PF01554 MatE A6J30_23305 PF07690 Major Facilitator Superfamily A6J30_23310 PF00085 Thioredoxin A6J30_23315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6J30_23315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6J30_23335 PF01238 Phosphomannose isomerase type I A6J30_23340 PF07690 Major Facilitator Superfamily A6J30_23345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_23345 PF07730 Histidine kinase A6J30_23345 PF05231 MASE1 A6J30_23350 PF00072 Response regulator receiver domain A6J30_23350 PF00196 Bacterial regulatory proteins, luxR family A6J30_23355 PF07690 Major Facilitator Superfamily A6J30_23360 PF02634 FdhD/NarQ family A6J30_23365 PF03466 LysR substrate binding domain A6J30_23365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_23375 PF00384 Molybdopterin oxidoreductase A6J30_23395 PF00691 OmpA family A6J30_23395 PF01389 OmpA-like transmembrane domain A6J30_23425 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J30_23425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J30_23440 PF04143 Sulphur transport A6J30_23450 PF00873 AcrB/AcrD/AcrF family A6J30_23455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_23470 PF03477 ATP cone domain A6J30_23470 PF13597 Anaerobic ribonucleoside-triphosphate reductase A6J30_23480 PF01554 MatE A6J30_23485 PF12833 Helix-turn-helix domain A6J30_23490 PF00155 Aminotransferase class I and II A6J30_23495 PF08443 RimK-like ATP-grasp domain A6J30_23495 PF18030 RimK PreATP-grasp domain A6J30_23505 PF04076 Bacterial OB fold (BOF) protein A6J30_23510 PF07685 CobB/CobQ-like glutamine amidotransferase domain A6J30_23520 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_23525 PF00005 ABC transporter A6J30_23525 PF03459 TOBE domain A6J30_23535 PF01590 GAF domain A6J30_23535 PF00563 EAL domain A6J30_23535 PF00990 Diguanylate cyclase, GGDEF domain A6J30_23535 PF00360 Phytochrome region A6J30_23545 PF00072 Response regulator receiver domain A6J30_23545 PF00990 Diguanylate cyclase, GGDEF domain A6J30_23560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A6J30_23560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6J30_23560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6J30_23565 PF02233 NAD(P) transhydrogenase beta subunit A6J30_23575 PF00072 Response regulator receiver domain A6J30_23575 PF00486 Transcriptional regulatory protein, C terminal A6J30_23590 PF03701 Uncharacterised protein family (UPF0181) A6J30_23595 PF00582 Universal stress protein family A6J30_23605 PF03466 LysR substrate binding domain A6J30_23605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_23635 PF05840 Bacteriophage replication gene A protein (GPA) A6J30_23750 PF01253 Translation initiation factor SUI1 A6J30_23760 PF07478 D-ala D-ala ligase C-terminus A6J30_23760 PF01820 D-ala D-ala ligase N-terminus A6J30_23770 PF00583 Acetyltransferase (GNAT) family A6J30_23770 PF13607 Succinyl-CoA ligase like flavodoxin domain A6J30_23770 PF13380 CoA binding domain A6J30_23775 PF03466 LysR substrate binding domain A6J30_23775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_23780 PF07715 TonB-dependent Receptor Plug Domain A6J30_23780 PF00593 TonB dependent receptor A6J30_23790 PF16363 GDP-mannose 4,6 dehydratase A6J30_23795 PF05231 MASE1 A6J30_23795 PF13426 PAS domain A6J30_23795 PF08447 PAS fold A6J30_23795 PF08448 PAS fold A6J30_23795 PF00990 Diguanylate cyclase, GGDEF domain A6J30_23795 PF00563 EAL domain A6J30_23800 PF03746 LamB/YcsF family A6J30_23805 PF02682 Carboxyltransferase domain, subdomain C and D A6J30_23810 PF02626 Carboxyltransferase domain, subdomain A and B A6J30_23815 PF01266 FAD dependent oxidoreductase A6J30_23815 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A6J30_23825 PF00005 ABC transporter A6J30_23830 PF13472 GDSL-like Lipase/Acylhydrolase family A6J30_23835 PF07055 Enoyl reductase FAD binding domain A6J30_23835 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6J30_23835 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6J30_23840 PF03707 Bacterial signalling protein N terminal repeat A6J30_23840 PF13188 PAS domain A6J30_23840 PF00563 EAL domain A6J30_23840 PF00990 Diguanylate cyclase, GGDEF domain A6J30_23850 PF00226 DnaJ domain A6J30_23850 PF01556 DnaJ C terminal domain A6J30_23850 PF00684 DnaJ central domain A6J30_23875 PF12793 Sugar transport-related sRNA regulator N-term A6J30_23875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J30_23885 PF03061 Thioesterase superfamily A6J30_23900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J30_23905 PF12262 Bacterial virulence factor lipase N-terminal A6J30_23920 PF03741 Integral membrane protein TerC family A6J30_23925 PF00149 Calcineurin-like phosphoesterase A6J30_23925 PF02872 5'-nucleotidase, C-terminal domain A6J30_23930 PF11398 Protein of unknown function (DUF2813) A6J30_23935 PF06496 Protein of unknown function (DUF1097) A6J30_23940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_23940 PF03466 LysR substrate binding domain A6J30_23945 PF01226 Formate/nitrite transporter A6J30_23950 PF04264 YceI-like domain A6J30_23955 PF01292 Prokaryotic cytochrome b561 A6J30_23970 PF12792 CSS motif domain associated with EAL A6J30_23970 PF00563 EAL domain A6J30_23975 PF00270 DEAD/DEAH box helicase A6J30_23975 PF00271 Helicase conserved C-terminal domain A6J30_23980 PF04336 Acyl carrier protein phosphodiesterase A6J30_23990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J30_24000 PF13419 Haloacid dehalogenase-like hydrolase A6J30_24005 PF11849 Domain of unknown function (DUF3369) A6J30_24020 PF00294 pfkB family carbohydrate kinase A6J30_24025 PF01268 Formate--tetrahydrofolate ligase A6J30_24030 PF00483 Nucleotidyl transferase A6J30_24035 PF06483 Chitinase C A6J30_24035 PF00704 Glycosyl hydrolases family 18 A6J30_24045 PF06719 AraC-type transcriptional regulator N-terminus A6J30_24045 PF12833 Helix-turn-helix domain A6J30_24050 PF00465 Iron-containing alcohol dehydrogenase A6J30_24060 PF02954 Bacterial regulatory protein, Fis family A6J30_24060 PF14532 Sigma-54 interaction domain A6J30_24060 PF00072 Response regulator receiver domain A6J30_24065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_24065 PF00672 HAMP domain A6J30_24065 PF00512 His Kinase A (phospho-acceptor) domain A6J30_24075 PF07690 Major Facilitator Superfamily A6J30_24080 PF00224 Pyruvate kinase, barrel domain A6J30_24080 PF02887 Pyruvate kinase, alpha/beta domain A6J30_24085 PF00005 ABC transporter A6J30_24090 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_24095 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J30_24100 PF00528 Binding-protein-dependent transport system inner membrane component A6J30_24105 PF00989 PAS fold A6J30_24105 PF00990 Diguanylate cyclase, GGDEF domain A6J30_24105 PF01590 GAF domain A6J30_24105 PF00563 EAL domain A6J30_24125 PF00356 Bacterial regulatory proteins, lacI family A6J30_24125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J30_24130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J30_24130 PF00381 PTS HPr component phosphorylation site A6J30_24135 PF00294 pfkB family carbohydrate kinase A6J30_24140 PF02378 Phosphotransferase system, EIIC A6J30_24140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J30_24150 PF00873 AcrB/AcrD/AcrF family A6J30_24160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J30_24170 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6J30_24170 PF01571 Aminomethyltransferase folate-binding domain A6J30_24180 PF00464 Serine hydroxymethyltransferase A6J30_24185 PF01597 Glycine cleavage H-protein A6J30_24190 PF02347 Glycine cleavage system P-protein A6J30_24215 PF01212 Beta-eliminating lyase A6J30_24220 PF17848 Acetyl-coA carboxylase zinc finger domain A6J30_24220 PF01039 Carboxyl transferase domain A6J30_24225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24225 PF03466 LysR substrate binding domain A6J30_24230 PF14579 Helix-hairpin-helix motif A6J30_24230 PF02811 PHP domain A6J30_24230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6J30_24230 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6J30_24230 PF00929 Exonuclease A6J30_24230 PF11490 DNA polymerase III polC-type N-terminus II A6J30_24235 PF00005 ABC transporter A6J30_24235 PF00664 ABC transporter transmembrane region A6J30_24255 PF02253 Phospholipase A1 A6J30_24270 PF09278 MerR, DNA binding A6J30_24270 PF00376 MerR family regulatory protein A6J30_24275 PF01327 Polypeptide deformylase A6J30_24305 PF03448 MgtE intracellular N domain A6J30_24305 PF01769 Divalent cation transporter A6J30_24305 PF00571 CBS domain A6J30_24325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J30_24330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J30_24340 PF01757 Acyltransferase family A6J30_24355 PF00141 Peroxidase A6J30_24365 PF13187 4Fe-4S dicluster domain A6J30_24365 PF01645 Conserved region in glutamate synthase A6J30_24375 PF12431 Transcriptional regulator A6J30_24375 PF00072 Response regulator receiver domain A6J30_24380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A6J30_24380 PF17203 Single cache domain 3 A6J30_24380 PF00989 PAS fold A6J30_24380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_24385 PF00939 Sodium:sulfate symporter transmembrane region A6J30_24390 PF00171 Aldehyde dehydrogenase family A6J30_24410 PF00892 EamA-like transporter family A6J30_24415 PF00893 Small Multidrug Resistance protein A6J30_24420 PF07504 Fungalysin/Thermolysin Propeptide Motif A6J30_24420 PF04151 Bacterial pre-peptidase C-terminal domain A6J30_24420 PF03413 Peptidase propeptide and YPEB domain A6J30_24420 PF01447 Thermolysin metallopeptidase, catalytic domain A6J30_24420 PF02868 Thermolysin metallopeptidase, alpha-helical domain A6J30_24430 PF01569 PAP2 superfamily A6J30_24445 PF00892 EamA-like transporter family A6J30_24455 PF07963 Prokaryotic N-terminal methylation motif A6J30_24455 PF08334 Type II secretion system (T2SS), protein G A6J30_24460 PF00072 Response regulator receiver domain A6J30_24460 PF01584 CheW-like domain A6J30_24480 PF00196 Bacterial regulatory proteins, luxR family A6J30_24480 PF00072 Response regulator receiver domain A6J30_24490 PF00990 Diguanylate cyclase, GGDEF domain A6J30_24495 PF00072 Response regulator receiver domain A6J30_24495 PF00196 Bacterial regulatory proteins, luxR family A6J30_24500 PF03707 Bacterial signalling protein N terminal repeat A6J30_24500 PF00563 EAL domain A6J30_24500 PF00990 Diguanylate cyclase, GGDEF domain A6J30_24500 PF13188 PAS domain A6J30_24505 PF00512 His Kinase A (phospho-acceptor) domain A6J30_24505 PF09456 RcsC Alpha-Beta-Loop (ABL) A6J30_24505 PF00072 Response regulator receiver domain A6J30_24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_24515 PF03466 LysR substrate binding domain A6J30_24515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24520 PF03466 LysR substrate binding domain A6J30_24520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24530 PF00691 OmpA family A6J30_24530 PF05736 OprF membrane domain A6J30_24565 PF00437 Type II/IV secretion system protein A6J30_24580 PF04972 BON domain A6J30_24580 PF00263 Bacterial type II and III secretion system protein A6J30_24580 PF13629 Pilus formation protein N terminal region A6J30_24600 PF03466 LysR substrate binding domain A6J30_24600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24605 PF12833 Helix-turn-helix domain A6J30_24615 PF08453 Peptidase family M9 N-terminal A6J30_24615 PF04151 Bacterial pre-peptidase C-terminal domain A6J30_24615 PF01752 Collagenase A6J30_24625 PF01926 50S ribosome-binding GTPase A6J30_24630 PF00155 Aminotransferase class I and II A6J30_24635 PF00072 Response regulator receiver domain A6J30_24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_24645 PF00583 Acetyltransferase (GNAT) family A6J30_24645 PF00814 Glycoprotease family A6J30_24655 PF03606 C4-dicarboxylate anaerobic carrier A6J30_24660 PF04011 LemA family A6J30_24665 PF01435 Peptidase family M48 A6J30_24680 PF18081 Fanconi anemia-associated nuclease SAP domain A6J30_24680 PF08774 VRR-NUC domain A6J30_24690 PF13186 Iron-sulfur cluster-binding domain A6J30_24690 PF04055 Radical SAM superfamily A6J30_24710 PF04076 Bacterial OB fold (BOF) protein A6J30_24715 PF00781 Diacylglycerol kinase catalytic domain A6J30_24720 PF03466 LysR substrate binding domain A6J30_24720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J30_24740 PF00092 von Willebrand factor type A domain A6J30_24755 PF17863 AAA lid domain A6J30_24755 PF07726 ATPase family associated with various cellular activities (AAA) A6J30_24760 PF13186 Iron-sulfur cluster-binding domain A6J30_24760 PF04055 Radical SAM superfamily A6J30_24765 PF00884 Sulfatase A6J30_24770 PF03466 LysR substrate binding domain A6J30_24770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J30_24780 PF00884 Sulfatase A6J30_24785 PF00884 Sulfatase A6J30_24795 PF00486 Transcriptional regulatory protein, C terminal A6J30_24795 PF00072 Response regulator receiver domain A6J30_24810 PF00072 Response regulator receiver domain A6J30_24810 PF00512 His Kinase A (phospho-acceptor) domain A6J30_24810 PF00672 HAMP domain A6J30_24810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J30_24810 PF01627 Hpt domain A6J30_24815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J30_24820 PF02142 MGS-like domain