locus-tag class description FDV78_00015 PF03951 Glutamine synthetase, beta-Grasp domain FDV78_00015 PF00120 Glutamine synthetase, catalytic domain FDV78_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_00025 PF00989 PAS fold FDV78_00025 PF00512 His Kinase A (phospho-acceptor) domain FDV78_00030 PF00072 Response regulator receiver domain FDV78_00030 PF00158 Sigma-54 interaction domain FDV78_00030 PF02954 Bacterial regulatory protein, Fis family FDV78_00035 PF00563 EAL domain FDV78_00035 PF00990 Diguanylate cyclase, GGDEF domain FDV78_00035 PF03707 Bacterial signalling protein N terminal repeat FDV78_00040 PF00962 Adenosine/AMP deaminase FDV78_00045 PF06969 HemN C-terminal domain FDV78_00045 PF04055 Radical SAM superfamily FDV78_00050 PF10675 Protein of unknown function (DUF2489) FDV78_00055 PF04220 Der GTPase activator (YihI) FDV78_00070 PF00034 Cytochrome c FDV78_00075 PF01926 50S ribosome-binding GTPase FDV78_00085 PF00476 DNA polymerase family A FDV78_00085 PF01367 5'-3' exonuclease, C-terminal SAM fold FDV78_00085 PF01612 3'-5' exonuclease FDV78_00085 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDV78_00100 PF00490 Delta-aminolevulinic acid dehydratase FDV78_00110 PF01026 TatD related DNase FDV78_00120 PF00902 Sec-independent protein translocase protein (TatC) FDV78_00125 PF02416 mttA/Hcf106 family FDV78_00130 PF02416 mttA/Hcf106 family FDV78_00135 PF03109 ABC1 family FDV78_00140 PF02036 SCP-2 sterol transfer family FDV78_00145 PF01209 ubiE/COQ5 methyltransferase family FDV78_00150 PF02646 RmuC family FDV78_00160 PF00990 Diguanylate cyclase, GGDEF domain FDV78_00160 PF00563 EAL domain FDV78_00160 PF03707 Bacterial signalling protein N terminal repeat FDV78_00165 PF01594 AI-2E family transporter FDV78_00215 PF04972 BON domain FDV78_00220 PF01590 GAF domain FDV78_00220 PF00158 Sigma-54 interaction domain FDV78_00220 PF02954 Bacterial regulatory protein, Fis family FDV78_00230 PF10625 Universal stress protein B (UspB) FDV78_00235 PF00210 Ferritin-like domain FDV78_00240 PF00582 Universal stress protein family FDV78_00245 PF00892 EamA-like transporter family FDV78_00255 PF04445 Putative SAM-dependent methyltransferase FDV78_00260 PF08448 PAS fold FDV78_00260 PF00990 Diguanylate cyclase, GGDEF domain FDV78_00260 PF00563 EAL domain FDV78_00265 PF01037 Lrp/AsnC ligand binding domain FDV78_00270 PF01432 Peptidase family M3 FDV78_00280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDV78_00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_00285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV78_00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_00290 PF03466 LysR substrate binding domain FDV78_00295 PF01048 Phosphorylase superfamily FDV78_00300 PF01081 KDPG and KHG aldolase FDV78_00305 PF02447 GntP family permease FDV78_00310 PF01202 Shikimate kinase FDV78_00315 PF00920 Dehydratase family FDV78_00320 PF00893 Small Multidrug Resistance protein FDV78_00325 PF00893 Small Multidrug Resistance protein FDV78_00330 PF03466 LysR substrate binding domain FDV78_00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_00335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV78_00335 PF00356 Bacterial regulatory proteins, lacI family FDV78_00340 PF00069 Protein kinase domain FDV78_00375 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_00375 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_00385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_00390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_00390 PF00005 ABC transporter FDV78_00405 PF13419 Haloacid dehalogenase-like hydrolase FDV78_00440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV78_00445 PF00580 UvrD/REP helicase N-terminal domain FDV78_00445 PF13361 UvrD-like helicase C-terminal domain FDV78_00450 PF16295 Tetracyclin repressor-like, C-terminal domain FDV78_00450 PF00440 Bacterial regulatory proteins, tetR family FDV78_00455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_00460 PF00873 AcrB/AcrD/AcrF family FDV78_00470 PF04380 Membrane fusogenic activity FDV78_00475 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDV78_00475 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDV78_00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_00480 PF03466 LysR substrate binding domain FDV78_00525 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_00530 PF07369 Protein of unknown function (DUF1488) FDV78_00535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDV78_00535 PF08501 Shikimate dehydrogenase substrate binding domain FDV78_00535 PF01488 Shikimate / quinate 5-dehydrogenase FDV78_00540 PF01218 Coproporphyrinogen III oxidase FDV78_00545 PF01300 Telomere recombination FDV78_00550 PF00731 AIR carboxylase FDV78_00555 PF02222 ATP-grasp domain FDV78_00555 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDV78_00560 PF01396 Topoisomerase DNA binding C4 zinc finger FDV78_00565 PF04361 Protein of unknown function (DUF494) FDV78_00570 PF02481 DNA recombination-mediator protein A FDV78_00570 PF17782 DprA winged helix domain FDV78_00580 PF01327 Polypeptide deformylase FDV78_00585 PF00551 Formyl transferase FDV78_00585 PF02911 Formyl transferase, C-terminal domain FDV78_00590 PF01189 16S rRNA methyltransferase RsmB/F FDV78_00590 PF01029 NusB family FDV78_00595 PF02080 TrkA-C domain FDV78_00595 PF02254 TrkA-N domain FDV78_00600 PF02386 Cation transport protein FDV78_00610 PF03006 Haemolysin-III related FDV78_00615 PF07070 SpoOM protein FDV78_00625 PF06288 Protein of unknown function (DUF1040) FDV78_00630 PF13746 4Fe-4S dicluster domain FDV78_00630 PF12801 4Fe-4S binding domain FDV78_00630 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FDV78_00635 PF01636 Phosphotransferase enzyme family FDV78_00640 PF01323 DSBA-like thioredoxin domain FDV78_00645 PF01553 Acyltransferase FDV78_00655 PF01078 Magnesium chelatase, subunit ChlI FDV78_00655 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDV78_00660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV78_00660 PF00205 Thiamine pyrophosphate enzyme, central domain FDV78_00660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV78_00670 PF01063 Amino-transferase class IV FDV78_00675 PF00920 Dehydratase family FDV78_00680 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_00680 PF00585 C-terminal regulatory domain of Threonine dehydratase FDV78_00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_00685 PF03466 LysR substrate binding domain FDV78_00690 PF07690 Major Facilitator Superfamily FDV78_00695 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_00700 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_00705 PF12804 MobA-like NTP transferase domain FDV78_00705 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_00710 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FDV78_00710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDV78_00715 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV78_00715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_00720 PF00231 ATP synthase FDV78_00725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_00725 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV78_00725 PF00306 ATP synthase alpha/beta chain, C terminal domain FDV78_00730 PF00213 ATP synthase delta (OSCP) subunit FDV78_00735 PF00430 ATP synthase B/B' CF(0) FDV78_00740 PF00137 ATP synthase subunit C FDV78_00745 PF00119 ATP synthase A chain FDV78_00750 PF03899 ATP synthase I chain FDV78_00755 PF17762 HTH domain found in ParB protein FDV78_00755 PF02195 ParB-like nuclease domain FDV78_00760 PF13614 AAA domain FDV78_00765 PF02527 rRNA small subunit methyltransferase G FDV78_00770 PF13932 GidA associated domain FDV78_00770 PF01134 Glucose inhibited division protein A FDV78_00775 PF00258 Flavodoxin FDV78_00780 PF10396 GTP-binding protein TrmE N-terminus FDV78_00780 PF12631 MnmE helical domain FDV78_00780 PF01926 50S ribosome-binding GTPase FDV78_00785 PF02096 60Kd inner membrane protein FDV78_00785 PF14849 YidC periplasmic domain FDV78_00790 PF01809 Putative membrane protein insertion efficiency factor FDV78_00795 PF00825 Ribonuclease P FDV78_00800 PF00468 Ribosomal protein L34 FDV78_00805 PF00005 ABC transporter FDV78_00810 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_00815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_00830 PF00308 Bacterial dnaA protein FDV78_00830 PF08299 Bacterial dnaA protein helix-turn-helix FDV78_00830 PF11638 DnaA N-terminal domain FDV78_00835 PF00712 DNA polymerase III beta subunit, N-terminal domain FDV78_00835 PF02768 DNA polymerase III beta subunit, C-terminal domain FDV78_00835 PF02767 DNA polymerase III beta subunit, central domain FDV78_00840 PF02463 RecF/RecN/SMC N terminal domain FDV78_00845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_00845 PF01751 Toprim domain FDV78_00845 PF00204 DNA gyrase B FDV78_00845 PF00986 DNA gyrase B subunit, carboxyl terminus FDV78_00845 PF18053 DNA gyrase B subunit insert domain FDV78_00865 PF00011 Hsp20/alpha crystallin family FDV78_00870 PF00155 Aminotransferase class I and II FDV78_00875 PF00128 Alpha amylase, catalytic domain FDV78_00880 PF05746 DALR anticodon binding domain FDV78_00880 PF02092 Glycyl-tRNA synthetase beta subunit FDV78_00885 PF02091 Glycyl-tRNA synthetase alpha subunit FDV78_00890 PF01169 Uncharacterized protein family UPF0016 FDV78_00900 PF01206 Sulfurtransferase TusA FDV78_00910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_00910 PF03466 LysR substrate binding domain FDV78_00915 PF00107 Zinc-binding dehydrogenase FDV78_00915 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_00920 PF02803 Thiolase, C-terminal domain FDV78_00920 PF00108 Thiolase, N-terminal domain FDV78_00925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDV78_00925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDV78_00925 PF00378 Enoyl-CoA hydratase/isomerase FDV78_00930 PF01205 Uncharacterized protein family UPF0029 FDV78_00930 PF09186 Domain of unknown function (DUF1949) FDV78_00935 PF02386 Cation transport protein FDV78_00940 PF12724 Flavodoxin domain FDV78_00990 PF13358 DDE superfamily endonuclease FDV78_01005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDV78_01010 PF01964 Radical SAM ThiC family FDV78_01010 PF13667 ThiC-associated domain FDV78_01015 PF02581 Thiamine monophosphate synthase FDV78_01020 PF00899 ThiF family FDV78_01025 PF02597 ThiS family FDV78_01030 PF05690 Thiazole biosynthesis protein ThiG FDV78_01035 PF06968 Biotin and Thiamin Synthesis associated domain FDV78_01035 PF04055 Radical SAM superfamily FDV78_01040 PF00557 Metallopeptidase family M24 FDV78_01040 PF01321 Creatinase/Prolidase N-terminal domain FDV78_01040 PF00557 Metallopeptidase family M24 FDV78_01040 PF01321 Creatinase/Prolidase N-terminal domain FDV78_01045 PF03466 LysR substrate binding domain FDV78_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_01050 PF07690 Major Facilitator Superfamily FDV78_01070 PF05114 Protein of unknown function (DUF692) FDV78_01080 PF00580 UvrD/REP helicase N-terminal domain FDV78_01080 PF13361 UvrD-like helicase C-terminal domain FDV78_01095 PF01810 LysE type translocator FDV78_01105 PF00892 EamA-like transporter family FDV78_01110 PF00271 Helicase conserved C-terminal domain FDV78_01110 PF00570 HRDC domain FDV78_01110 PF09382 RQC domain FDV78_01110 PF16124 RecQ zinc-binding FDV78_01110 PF00270 DEAD/DEAH box helicase FDV78_01125 PF02592 Putative vitamin uptake transporter FDV78_01130 PF02541 Ppx/GppA phosphatase family FDV78_01135 PF00270 DEAD/DEAH box helicase FDV78_01135 PF00271 Helicase conserved C-terminal domain FDV78_01140 PF00085 Thioredoxin FDV78_01145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_01145 PF07497 Rho termination factor, RNA-binding domain FDV78_01145 PF07498 Rho termination factor, N-terminal domain FDV78_01160 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FDV78_01165 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_01170 PF00175 Oxidoreductase NAD-binding domain FDV78_01215 PF07219 HemY protein N-terminus FDV78_01220 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FDV78_01225 PF02602 Uroporphyrinogen-III synthase HemD FDV78_01230 PF03900 Porphobilinogen deaminase, C-terminal domain FDV78_01230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDV78_01235 PF12633 Adenylate cyclase NT domain FDV78_01235 PF01295 Adenylate cyclase, class-I FDV78_01240 PF01491 Frataxin-like domain FDV78_01250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV78_01250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV78_01255 PF01678 Diaminopimelate epimerase FDV78_01265 PF02899 Phage integrase, N-terminal SAM-like domain FDV78_01265 PF00589 Phage integrase family FDV78_01270 PF13419 Haloacid dehalogenase-like hydrolase FDV78_01275 PF00563 EAL domain FDV78_01275 PF08495 FIST N domain FDV78_01275 PF10442 FIST C domain FDV78_01275 PF00990 Diguanylate cyclase, GGDEF domain FDV78_01305 PF12146 Serine aminopeptidase, S33 FDV78_01310 PF01810 LysE type translocator FDV78_01315 PF08668 HDOD domain FDV78_01315 PF00563 EAL domain FDV78_01320 PF01022 Bacterial regulatory protein, arsR family FDV78_01325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV78_01325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV78_01380 PF01914 MarC family integral membrane protein FDV78_01395 PF00448 SRP54-type protein, GTPase domain FDV78_01395 PF02881 SRP54-type protein, helical bundle domain FDV78_01400 PF00005 ABC transporter FDV78_01405 PF18075 FtsX extracellular domain FDV78_01410 PF04545 Sigma-70, region 4 FDV78_01410 PF04542 Sigma-70 region 2 FDV78_01410 PF00140 Sigma-70 factor, region 1.2 FDV78_01420 PF00581 Rhodanese-like domain FDV78_01425 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FDV78_01425 PF01694 Rhomboid family FDV78_01430 PF03748 Flagellar basal body-associated protein FliL FDV78_01435 PF04345 Chorismate lyase FDV78_01440 PF01040 UbiA prenyltransferase family FDV78_01445 PF01553 Acyltransferase FDV78_01460 PF00717 Peptidase S24-like FDV78_01460 PF01726 LexA DNA binding domain FDV78_01465 PF04072 Leucine carboxyl methyltransferase FDV78_01470 PF01554 MatE FDV78_01475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV78_01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_01480 PF00440 Bacterial regulatory proteins, tetR family FDV78_01490 PF05958 tRNA (Uracil-5-)-methyltransferase FDV78_01495 PF07715 TonB-dependent Receptor Plug Domain FDV78_01495 PF00593 TonB dependent receptor FDV78_01505 PF01177 Asp/Glu/Hydantoin racemase FDV78_01535 PF13091 PLD-like domain FDV78_01545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDV78_01545 PF01565 FAD binding domain FDV78_01550 PF02237 Biotin protein ligase C terminal domain FDV78_01550 PF03099 Biotin/lipoate A/B protein ligase family FDV78_01550 PF08279 HTH domain FDV78_01555 PF00485 Phosphoribulokinase / Uridine kinase family FDV78_01580 PF03144 Elongation factor Tu domain 2 FDV78_01580 PF03143 Elongation factor Tu C-terminal domain FDV78_01580 PF00009 Elongation factor Tu GTP binding domain FDV78_01590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDV78_01595 PF00467 KOW motif FDV78_01595 PF02357 Transcription termination factor nusG FDV78_01600 PF03946 Ribosomal protein L11, N-terminal domain FDV78_01600 PF00298 Ribosomal protein L11, RNA binding domain FDV78_01605 PF00687 Ribosomal protein L1p/L10e family FDV78_01610 PF00466 Ribosomal protein L10 FDV78_01615 PF16320 Ribosomal protein L7/L12 dimerisation domain FDV78_01615 PF00542 Ribosomal protein L7/L12 C-terminal domain FDV78_01620 PF04565 RNA polymerase Rpb2, domain 3 FDV78_01620 PF04560 RNA polymerase Rpb2, domain 7 FDV78_01620 PF04563 RNA polymerase beta subunit FDV78_01620 PF00562 RNA polymerase Rpb2, domain 6 FDV78_01620 PF04561 RNA polymerase Rpb2, domain 2 FDV78_01620 PF10385 RNA polymerase beta subunit external 1 domain FDV78_01625 PF05000 RNA polymerase Rpb1, domain 4 FDV78_01625 PF00623 RNA polymerase Rpb1, domain 2 FDV78_01625 PF04997 RNA polymerase Rpb1, domain 1 FDV78_01625 PF04998 RNA polymerase Rpb1, domain 5 FDV78_01625 PF04983 RNA polymerase Rpb1, domain 3 FDV78_01630 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FDV78_01635 PF09297 NADH pyrophosphatase zinc ribbon domain FDV78_01635 PF00293 NUDIX domain FDV78_01650 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDV78_01655 PF03167 Uracil DNA glycosylase superfamily FDV78_01660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_01665 PF04222 Protein of unknown function (DUF416) FDV78_01670 PF01595 Cyclin M transmembrane N-terminal domain FDV78_01670 PF00571 CBS domain FDV78_01675 PF00216 Bacterial DNA-binding protein FDV78_01685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDV78_01685 PF02843 Phosphoribosylglycinamide synthetase, C domain FDV78_01685 PF02844 Phosphoribosylglycinamide synthetase, N domain FDV78_01695 PF01808 AICARFT/IMPCHase bienzyme FDV78_01695 PF02142 MGS-like domain FDV78_01705 PF13411 MerR HTH family regulatory protein FDV78_01710 PF18500 CadC C-terminal domain 1 FDV78_01710 PF00486 Transcriptional regulatory protein, C terminal FDV78_01720 PF13520 Amino acid permease FDV78_01725 PF01276 Orn/Lys/Arg decarboxylase, major domain FDV78_01725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDV78_01725 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDV78_01820 PF05230 MASE2 domain FDV78_01820 PF00990 Diguanylate cyclase, GGDEF domain FDV78_01825 PF12848 ABC transporter FDV78_01825 PF00005 ABC transporter FDV78_01830 PF07690 Major Facilitator Superfamily FDV78_01835 PF02954 Bacterial regulatory protein, Fis family FDV78_01840 PF01207 Dihydrouridine synthase (Dus) FDV78_01855 PF00289 Biotin carboxylase, N-terminal domain FDV78_01855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV78_01855 PF02785 Biotin carboxylase C-terminal domain FDV78_01860 PF00364 Biotin-requiring enzyme FDV78_01865 PF01220 Dehydroquinase class II FDV78_01870 PF13193 AMP-binding enzyme C-terminal domain FDV78_01870 PF00501 AMP-binding enzyme FDV78_01870 PF16177 Acetyl-coenzyme A synthetase N-terminus FDV78_01885 PF12832 MFS_1 like family FDV78_01890 PF00072 Response regulator receiver domain FDV78_01890 PF01627 Hpt domain FDV78_01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_01890 PF00672 HAMP domain FDV78_01890 PF00512 His Kinase A (phospho-acceptor) domain FDV78_01895 PF00206 Lyase FDV78_01895 PF10415 Fumarase C C-terminus FDV78_01915 PF00474 Sodium:solute symporter family FDV78_01925 PF03471 Transporter associated domain FDV78_01925 PF02080 TrkA-C domain FDV78_01925 PF00999 Sodium/hydrogen exchanger family FDV78_01930 PF00072 Response regulator receiver domain FDV78_01930 PF00196 Bacterial regulatory proteins, luxR family FDV78_01935 PF11412 Disulphide bond corrector protein DsbC FDV78_01935 PF02683 Cytochrome C biogenesis protein transmembrane region FDV78_01940 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDV78_01945 PF10415 Fumarase C C-terminus FDV78_01945 PF00206 Lyase FDV78_01950 PF04186 FxsA cytoplasmic membrane protein FDV78_01955 PF00588 SpoU rRNA Methylase family FDV78_01960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDV78_01960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDV78_01965 PF00512 His Kinase A (phospho-acceptor) domain FDV78_01965 PF16527 Two-component sensor protein CpxA, periplasmic domain FDV78_01965 PF00672 HAMP domain FDV78_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_01970 PF00486 Transcriptional regulatory protein, C terminal FDV78_01970 PF00072 Response regulator receiver domain FDV78_01975 PF07813 LTXXQ motif family protein FDV78_01980 PF16916 Dimerisation domain of Zinc Transporter FDV78_01980 PF01545 Cation efflux family FDV78_01985 PF00365 Phosphofructokinase FDV78_01990 PF01554 MatE FDV78_01995 PF00166 Chaperonin 10 Kd subunit FDV78_02000 PF00118 TCP-1/cpn60 chaperonin family FDV78_02010 PF02308 MgtC family FDV78_02015 PF00842 Alanine racemase, C-terminal domain FDV78_02015 PF01168 Alanine racemase, N-terminal domain FDV78_02025 PF04055 Radical SAM superfamily FDV78_02030 PF08207 Elongation factor P (EF-P) KOW-like domain FDV78_02030 PF09285 Elongation factor P, C-terminal FDV78_02030 PF01132 Elongation factor P (EF-P) OB domain FDV78_02040 PF02313 Fumarate reductase subunit D FDV78_02045 PF02300 Fumarate reductase subunit C FDV78_02050 PF13183 4Fe-4S dicluster domain FDV78_02050 PF13085 2Fe-2S iron-sulfur cluster binding domain FDV78_02055 PF02910 Fumarate reductase flavoprotein C-term FDV78_02055 PF00890 FAD binding domain FDV78_02065 PF00152 tRNA synthetases class II (D, K and N) FDV78_02075 PF08360 QacR-like protein, C-terminal region FDV78_02075 PF00440 Bacterial regulatory proteins, tetR family FDV78_02085 PF01551 Peptidase family M23 FDV78_02090 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_02090 PF06426 Serine acetyltransferase, N-terminal FDV78_02095 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDV78_02095 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDV78_02100 PF02556 Preprotein translocase subunit SecB FDV78_02105 PF00581 Rhodanese-like domain FDV78_02115 PF01676 Metalloenzyme superfamily FDV78_02115 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDV78_02155 PF02796 Helix-turn-helix domain of resolvase FDV78_02155 PF00239 Resolvase, N terminal domain FDV78_02160 PF00939 Sodium:sulfate symporter transmembrane region FDV78_02165 PF02666 Phosphatidylserine decarboxylase FDV78_02170 PF03193 RsgA GTPase FDV78_02175 PF00929 Exonuclease FDV78_02245 PF08331 Domain of unknown function (DUF1730) FDV78_02250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDV78_02255 PF01520 N-acetylmuramoyl-L-alanine amidase FDV78_02260 PF08676 MutL C terminal dimerisation domain FDV78_02260 PF01119 DNA mismatch repair protein, C-terminal domain FDV78_02270 PF17209 Hfq protein FDV78_02275 PF16360 GTP-binding GTPase Middle Region FDV78_02275 PF01926 50S ribosome-binding GTPase FDV78_02275 PF13167 GTP-binding GTPase N-terminal FDV78_02280 PF01145 SPFH domain / Band 7 family FDV78_02280 PF12221 Bacterial membrane protein N terminal FDV78_02285 PF01145 SPFH domain / Band 7 family FDV78_02290 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FDV78_02295 PF00709 Adenylosuccinate synthetase FDV78_02305 PF08238 Sel1 repeat FDV78_02310 PF00970 Oxidoreductase FAD-binding domain FDV78_02310 PF00042 Globin FDV78_02310 PF00175 Oxidoreductase NAD-binding domain FDV78_02315 PF02082 Transcriptional regulator FDV78_02320 PF08206 Ribonuclease B OB domain FDV78_02320 PF17876 Cold shock domain FDV78_02320 PF00575 S1 RNA binding domain FDV78_02320 PF00773 RNB domain FDV78_02320 PF08461 Ribonuclease R winged-helix domain FDV78_02325 PF00588 SpoU rRNA Methylase family FDV78_02325 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDV78_02330 PF13419 Haloacid dehalogenase-like hydrolase FDV78_02335 PF00579 tRNA synthetases class I (W and Y) FDV78_02365 PF00117 Glutamine amidotransferase class-I FDV78_02370 PF00202 Aminotransferase class-III FDV78_02375 PF04958 Arginine N-succinyltransferase beta subunit FDV78_02380 PF00171 Aldehyde dehydrogenase family FDV78_02390 PF13545 Crp-like helix-turn-helix domain FDV78_02390 PF00027 Cyclic nucleotide-binding domain FDV78_02395 PF00485 Phosphoribulokinase / Uridine kinase family FDV78_02400 PF06794 Uncharacterised protein family (UPF0270) FDV78_02405 PF00561 alpha/beta hydrolase fold FDV78_02415 PF00005 ABC transporter FDV78_02415 PF12848 ABC transporter FDV78_02425 PF02525 Flavodoxin-like fold FDV78_02430 PF00999 Sodium/hydrogen exchanger family FDV78_02430 PF02254 TrkA-N domain FDV78_02440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_02450 PF01112 Asparaginase FDV78_02455 PF04102 SlyX FDV78_02465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV78_02465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_02470 PF08348 YheO-like PAS domain FDV78_02470 PF13309 HTH domain FDV78_02475 PF02635 DsrE/DsrF-like family FDV78_02480 PF02635 DsrE/DsrF-like family FDV78_02485 PF04077 DsrH like protein FDV78_02490 PF00164 Ribosomal protein S12/S23 FDV78_02495 PF00177 Ribosomal protein S7p/S5e FDV78_02500 PF00679 Elongation factor G C-terminus FDV78_02500 PF03764 Elongation factor G, domain IV FDV78_02500 PF00009 Elongation factor Tu GTP binding domain FDV78_02500 PF03144 Elongation factor Tu domain 2 FDV78_02500 PF14492 Elongation Factor G, domain II FDV78_02505 PF03144 Elongation factor Tu domain 2 FDV78_02505 PF00009 Elongation factor Tu GTP binding domain FDV78_02505 PF03143 Elongation factor Tu C-terminal domain FDV78_02510 PF04324 BFD-like [2Fe-2S] binding domain FDV78_02515 PF00210 Ferritin-like domain FDV78_02520 PF03949 Malic enzyme, NAD binding domain FDV78_02520 PF00390 Malic enzyme, N-terminal domain FDV78_02525 PF01340 Met Apo-repressor, MetJ FDV78_02530 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV78_02535 PF03447 Homoserine dehydrogenase, NAD binding domain FDV78_02535 PF00742 Homoserine dehydrogenase FDV78_02535 PF00696 Amino acid kinase family FDV78_02540 PF02219 Methylenetetrahydrofolate reductase FDV78_02550 PF00311 Phosphoenolpyruvate carboxylase FDV78_02555 PF01546 Peptidase family M20/M25/M40 FDV78_02555 PF07687 Peptidase dimerisation domain FDV78_02560 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV78_02560 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV78_02565 PF00696 Amino acid kinase family FDV78_02570 PF00764 Arginosuccinate synthase FDV78_02575 PF00206 Lyase FDV78_02575 PF00583 Acetyltransferase (GNAT) family FDV78_02575 PF14698 Argininosuccinate lyase C-terminal FDV78_02590 PF00462 Glutaredoxin FDV78_02590 PF08534 Redoxin FDV78_02595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_02595 PF03466 LysR substrate binding domain FDV78_02600 PF17092 Penicillin-binding protein OB-like domain FDV78_02600 PF00905 Penicillin binding protein transpeptidase domain FDV78_02600 PF00912 Transglycosylase FDV78_02625 PF07660 Secretin and TonB N terminus short domain FDV78_02625 PF03958 Bacterial type II/III secretion system short domain FDV78_02625 PF00263 Bacterial type II and III secretion system protein FDV78_02625 PF11741 AMIN domain FDV78_02630 PF01202 Shikimate kinase FDV78_02635 PF01761 3-dehydroquinate synthase FDV78_02645 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDV78_02650 PF00834 Ribulose-phosphate 3 epimerase family FDV78_02655 PF01250 Ribosomal protein S6 FDV78_02660 PF00436 Single-strand binding protein family FDV78_02665 PF01084 Ribosomal protein S18 FDV78_02670 PF03948 Ribosomal protein L9, C-terminal domain FDV78_02670 PF01281 Ribosomal protein L9, N-terminal domain FDV78_02680 PF00772 DnaB-like helicase N terminal domain FDV78_02680 PF03796 DnaB-like helicase C terminal domain FDV78_02685 PF00842 Alanine racemase, C-terminal domain FDV78_02685 PF01168 Alanine racemase, N-terminal domain FDV78_02695 PF01894 Uncharacterised protein family UPF0047 FDV78_02700 PF00342 Phosphoglucose isomerase FDV78_02710 PF01475 Ferric uptake regulator family FDV78_02720 PF01207 Dihydrouridine synthase (Dus) FDV78_02745 PF00667 FAD binding domain FDV78_02745 PF00175 Oxidoreductase NAD-binding domain FDV78_02745 PF00258 Flavodoxin FDV78_02750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV78_02750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV78_02755 PF01507 Phosphoadenosine phosphosulfate reductase family FDV78_02820 PF13358 DDE superfamily endonuclease FDV78_02830 PF00999 Sodium/hydrogen exchanger family FDV78_02835 PF02607 B12 binding domain FDV78_02835 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDV78_02835 PF00809 Pterin binding enzyme FDV78_02835 PF02574 Homocysteine S-methyltransferase FDV78_02835 PF02310 B12 binding domain FDV78_02840 PF01610 Transposase FDV78_02840 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_02840 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_02845 PF00696 Amino acid kinase family FDV78_02845 PF01842 ACT domain FDV78_02860 PF00266 Aminotransferase class-V FDV78_02870 PF00005 ABC transporter FDV78_02870 PF17755 UvrA DNA-binding domain FDV78_02870 PF17760 UvrA interaction domain FDV78_02875 PF00483 Nucleotidyl transferase FDV78_02880 PF00196 Bacterial regulatory proteins, luxR family FDV78_02885 PF00436 Single-strand binding protein family FDV78_02890 PF17157 Gammaproteobacterial periplasmic sensor domain FDV78_02890 PF00563 EAL domain FDV78_02890 PF00990 Diguanylate cyclase, GGDEF domain FDV78_02910 PF03958 Bacterial type II/III secretion system short domain FDV78_02910 PF00263 Bacterial type II and III secretion system protein FDV78_02910 PF07660 Secretin and TonB N terminus short domain FDV78_02910 PF11741 AMIN domain FDV78_02915 PF13401 AAA domain FDV78_02915 PF01471 Putative peptidoglycan binding domain FDV78_02925 PF00437 Type II/IV secretion system protein FDV78_02925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDV78_02930 PF00482 Type II secretion system (T2SS), protein F FDV78_02940 PF07963 Prokaryotic N-terminal methylation motif FDV78_02940 PF00114 Pilin (bacterial filament) FDV78_02980 PF04085 rod shape-determining protein MreC FDV78_02985 PF04093 rod shape-determining protein MreD FDV78_02990 PF02545 Maf-like protein FDV78_02995 PF10150 Ribonuclease E/G family FDV78_02995 PF00575 S1 RNA binding domain FDV78_03000 PF13502 AsmA-like C-terminal region FDV78_03000 PF13116 Protein of unknown function FDV78_03005 PF00795 Carbon-nitrogen hydrolase FDV78_03010 PF01523 Putative modulator of DNA gyrase FDV78_03015 PF02562 PhoH-like protein FDV78_03015 PF13638 PIN domain FDV78_03020 PF12137 RNA polymerase recycling family C-terminal FDV78_03020 PF00176 SNF2 family N-terminal domain FDV78_03020 PF18339 RapA N-terminal Tudor like domain 1 FDV78_03020 PF18337 RapA N-terminal Tudor like domain FDV78_03020 PF00271 Helicase conserved C-terminal domain FDV78_03035 PF00849 RNA pseudouridylate synthase FDV78_03040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_03040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV78_03045 PF04751 Protein of unknown function (DUF615) FDV78_03050 PF01523 Putative modulator of DNA gyrase FDV78_03055 PF03448 MgtE intracellular N domain FDV78_03055 PF00571 CBS domain FDV78_03055 PF01769 Divalent cation transporter FDV78_03060 PF00381 PTS HPr component phosphorylation site FDV78_03065 PF03668 P-loop ATPase protein family FDV78_03070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_03075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDV78_03085 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDV78_03085 PF00005 ABC transporter FDV78_03090 PF03968 OstA-like protein FDV78_03100 PF00571 CBS domain FDV78_03100 PF01380 SIS domain FDV78_03105 PF01699 Sodium/calcium exchanger protein FDV78_03110 PF00005 ABC transporter FDV78_03115 PF02405 Permease MlaE FDV78_03120 PF02470 MlaD protein FDV78_03125 PF05494 MlaC protein FDV78_03135 PF01722 BolA-like protein FDV78_03140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDV78_03145 PF01553 Acyltransferase FDV78_03150 PF01042 Endoribonuclease L-PSP FDV78_03155 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FDV78_03155 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FDV78_03160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDV78_03160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDV78_03170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDV78_03170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDV78_03185 PF06877 Regulator of ribonuclease activity B FDV78_03195 PF00583 Acetyltransferase (GNAT) family FDV78_03205 PF10458 Valyl tRNA synthetase tRNA binding arm FDV78_03205 PF00133 tRNA synthetases class I (I, L, M and V) FDV78_03205 PF08264 Anticodon-binding domain of tRNA FDV78_03210 PF04364 DNA polymerase III chi subunit, HolC FDV78_03215 PF02789 Cytosol aminopeptidase family, N-terminal domain FDV78_03215 PF00883 Cytosol aminopeptidase family, catalytic domain FDV78_03220 PF03739 Lipopolysaccharide export system permease LptF/LptG FDV78_03225 PF03739 Lipopolysaccharide export system permease LptF/LptG FDV78_03235 PF10011 Predicted membrane protein (DUF2254) FDV78_03240 PF00106 short chain dehydrogenase FDV78_03250 PF01522 Polysaccharide deacetylase FDV78_03255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_03260 PF02378 Phosphotransferase system, EIIC FDV78_03265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FDV78_03270 PF02056 Family 4 glycosyl hydrolase FDV78_03270 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDV78_03275 PF04794 YdjC-like protein FDV78_03280 PF00356 Bacterial regulatory proteins, lacI family FDV78_03280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV78_03285 PF00072 Response regulator receiver domain FDV78_03335 PF00171 Aldehyde dehydrogenase family FDV78_03365 PF00672 HAMP domain FDV78_03365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_03365 PF17200 Single Cache domain 2 FDV78_03405 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FDV78_03405 PF01464 Transglycosylase SLT domain FDV78_03410 PF04362 Bacterial Fe(2+) trafficking FDV78_03415 PF14815 NUDIX domain FDV78_03415 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV78_03415 PF00633 Helix-hairpin-helix motif FDV78_03420 PF02390 Putative methyltransferase FDV78_03425 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDV78_03430 PF04960 Glutaminase FDV78_03435 PF04055 Radical SAM superfamily FDV78_03435 PF06969 HemN C-terminal domain FDV78_03440 PF01725 Ham1 family FDV78_03450 PF02594 Uncharacterised ACR, YggU family COG1872 FDV78_03455 PF02325 YGGT family FDV78_03460 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDV78_03460 PF03807 NADP oxidoreductase coenzyme F420-dependent FDV78_03465 PF01168 Alanine racemase, N-terminal domain FDV78_03470 PF00437 Type II/IV secretion system protein FDV78_03475 PF00437 Type II/IV secretion system protein FDV78_03480 PF03652 Holliday junction resolvase FDV78_03485 PF02622 Uncharacterized ACR, COG1678 FDV78_03490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDV78_03490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDV78_03495 PF04452 RNA methyltransferase FDV78_03500 PF04231 Endonuclease I FDV78_03505 PF10263 SprT-like family FDV78_03505 PF17283 SprT-like zinc ribbon domain FDV78_03515 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDV78_03515 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDV78_03515 PF02772 S-adenosylmethionine synthetase, central domain FDV78_03525 PF00456 Transketolase, thiamine diphosphate binding domain FDV78_03525 PF02779 Transketolase, pyrimidine binding domain FDV78_03525 PF02780 Transketolase, C-terminal domain FDV78_03530 PF03466 LysR substrate binding domain FDV78_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_03535 PF07715 TonB-dependent Receptor Plug Domain FDV78_03535 PF00593 TonB dependent receptor FDV78_03540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV78_03540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV78_03545 PF00162 Phosphoglycerate kinase FDV78_03550 PF01116 Fructose-bisphosphate aldolase class-II FDV78_03555 PF05552 Conserved TM helix FDV78_03555 PF00924 Mechanosensitive ion channel FDV78_03560 PF04073 Aminoacyl-tRNA editing domain FDV78_03565 PF01810 LysE type translocator FDV78_03575 PF04402 Protein of unknown function (DUF541) FDV78_03580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV78_03580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_03580 PF01842 ACT domain FDV78_03585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDV78_03590 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDV78_03600 PF05164 Cell division protein ZapA FDV78_03610 PF03695 Uncharacterised protein family (UPF0149) FDV78_03615 PF01494 FAD binding domain FDV78_03620 PF01494 FAD binding domain FDV78_03635 PF01571 Aminomethyltransferase folate-binding domain FDV78_03640 PF03937 Flavinator of succinate dehydrogenase FDV78_03650 PF00890 FAD binding domain FDV78_03650 PF02910 Fumarate reductase flavoprotein C-term FDV78_03660 PF08281 Sigma-70, region 4 FDV78_03660 PF04542 Sigma-70 region 2 FDV78_03665 PF03873 Anti sigma-E protein RseA, C-terminal domain FDV78_03665 PF03872 Anti sigma-E protein RseA, N-terminal domain FDV78_03670 PF17188 MucB/RseB C-terminal domain FDV78_03670 PF03888 MucB/RseB N-terminal domain FDV78_03680 PF03144 Elongation factor Tu domain 2 FDV78_03680 PF00679 Elongation factor G C-terminus FDV78_03680 PF06421 GTP-binding protein LepA C-terminus FDV78_03680 PF00009 Elongation factor Tu GTP binding domain FDV78_03685 PF10502 Signal peptidase, peptidase S26 FDV78_03690 PF00035 Double-stranded RNA binding motif FDV78_03690 PF14622 Ribonuclease-III-like FDV78_03695 PF01926 50S ribosome-binding GTPase FDV78_03695 PF07650 KH domain FDV78_03700 PF02565 Recombination protein O C terminal FDV78_03700 PF11967 Recombination protein O N terminal FDV78_03705 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDV78_03710 PF01648 4'-phosphopantetheinyl transferase superfamily FDV78_03715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV78_03715 PF00072 Response regulator receiver domain FDV78_03715 PF00672 HAMP domain FDV78_03715 PF01627 Hpt domain FDV78_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_03715 PF00512 His Kinase A (phospho-acceptor) domain FDV78_03725 PF05958 tRNA (Uracil-5-)-methyltransferase FDV78_03725 PF01938 TRAM domain FDV78_03735 PF02824 TGS domain FDV78_03735 PF04607 Region found in RelA / SpoT proteins FDV78_03735 PF13291 ACT domain FDV78_03740 PF03819 MazG nucleotide pyrophosphohydrolase domain FDV78_03745 PF00117 Glutamine amidotransferase class-I FDV78_03745 PF06418 CTP synthase N-terminus FDV78_03750 PF00113 Enolase, C-terminal TIM barrel domain FDV78_03750 PF03952 Enolase, N-terminal domain FDV78_03755 PF04977 Septum formation initiator FDV78_03760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDV78_03765 PF02542 YgbB family FDV78_03770 PF01142 tRNA pseudouridine synthase D (TruD) FDV78_03775 PF01975 Survival protein SurE FDV78_03785 PF01476 LysM domain FDV78_03785 PF01551 Peptidase family M23 FDV78_03795 PF05192 MutS domain III FDV78_03795 PF05188 MutS domain II FDV78_03795 PF01624 MutS domain I FDV78_03795 PF05190 MutS family domain IV FDV78_03795 PF00488 MutS domain V FDV78_03800 PF00589 Phage integrase family FDV78_03800 PF14659 Phage integrase, N-terminal SAM-like domain FDV78_03810 PF01610 Transposase FDV78_03810 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_03810 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_03855 PF00072 Response regulator receiver domain FDV78_03855 PF00486 Transcriptional regulatory protein, C terminal FDV78_03900 PF04002 RadC-like JAB domain FDV78_03930 PF04717 Type VI secretion system, phage-baseplate injector FDV78_03945 PF03781 Sulfatase-modifying factor enzyme 1 FDV78_03955 PF02464 Competence-damaged protein FDV78_03960 PF00154 recA bacterial DNA recombination protein FDV78_03965 PF02631 RecX family FDV78_03970 PF02272 DHHA1 domain FDV78_03970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV78_03970 PF01411 tRNA synthetases class II (A) FDV78_03975 PF01842 ACT domain FDV78_03975 PF13840 ACT domain FDV78_03975 PF00696 Amino acid kinase family FDV78_03980 PF02599 Global regulator protein family FDV78_04035 PF04277 Oxaloacetate decarboxylase, gamma chain FDV78_04040 PF00364 Biotin-requiring enzyme FDV78_04040 PF00682 HMGL-like FDV78_04040 PF02436 Conserved carboxylase domain FDV78_04045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FDV78_04050 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_04050 PF00107 Zinc-binding dehydrogenase FDV78_04055 PF09335 SNARE associated Golgi protein FDV78_04060 PF05193 Peptidase M16 inactive domain FDV78_04060 PF00675 Insulinase (Peptidase family M16) FDV78_04065 PF04262 Glutamate-cysteine ligase FDV78_04075 PF02664 S-Ribosylhomocysteinase (LuxS) FDV78_04080 PF01595 Cyclin M transmembrane N-terminal domain FDV78_04080 PF00571 CBS domain FDV78_04080 PF03471 Transporter associated domain FDV78_04085 PF01578 Cytochrome C assembly protein FDV78_04090 PF02881 SRP54-type protein, helical bundle domain FDV78_04090 PF00448 SRP54-type protein, GTPase domain FDV78_04090 PF02978 Signal peptide binding domain FDV78_04095 PF00886 Ribosomal protein S16 FDV78_04100 PF01782 RimM N-terminal domain FDV78_04100 PF05239 PRC-barrel domain FDV78_04105 PF01746 tRNA (Guanine-1)-methyltransferase FDV78_04110 PF01245 Ribosomal protein L19 FDV78_04115 PF03884 DNA gyrase inhibitor YacG FDV78_04120 PF07072 Cell division protein FDV78_04125 PF01121 Dephospho-CoA kinase FDV78_04130 PF06750 Bacterial Peptidase A24 N-terminal domain FDV78_04130 PF01478 Type IV leader peptidase family FDV78_04135 PF00482 Type II secretion system (T2SS), protein F FDV78_04140 PF00437 Type II/IV secretion system protein FDV78_04140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDV78_04150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDV78_04150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDV78_04155 PF01510 N-acetylmuramoyl-L-alanine amidase FDV78_04160 PF07729 FCD domain FDV78_04160 PF00392 Bacterial regulatory proteins, gntR family FDV78_04165 PF00456 Transketolase, thiamine diphosphate binding domain FDV78_04165 PF17831 Pyruvate dehydrogenase E1 component middle domain FDV78_04170 PF00364 Biotin-requiring enzyme FDV78_04170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV78_04170 PF02817 e3 binding domain FDV78_04175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV78_04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_04180 PF00440 Bacterial regulatory proteins, tetR family FDV78_04185 PF00156 Phosphoribosyl transferase domain FDV78_04190 PF00484 Carbonic anhydrase FDV78_04195 PF01740 STAS domain FDV78_04195 PF00916 Sulfate permease family FDV78_04205 PF00005 ABC transporter FDV78_04210 PF01061 ABC-2 type transporter FDV78_04220 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV78_04230 PF02569 Pantoate-beta-alanine ligase FDV78_04235 PF02548 Ketopantoate hydroxymethyltransferase FDV78_04240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDV78_04245 PF01743 Poly A polymerase head domain FDV78_04245 PF12626 Polymerase A arginine-rich C-terminus FDV78_04245 PF12627 Probable RNA and SrmB- binding site of polymerase A FDV78_04250 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV78_04260 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDV78_04265 PF03749 Sugar fermentation stimulation protein RE domain FDV78_04265 PF17746 SfsA N-terminal OB domain FDV78_04270 PF04408 Helicase associated domain (HA2) FDV78_04270 PF00271 Helicase conserved C-terminal domain FDV78_04270 PF08482 ATP-dependent helicase C-terminal FDV78_04270 PF00270 DEAD/DEAH box helicase FDV78_04315 PF00912 Transglycosylase FDV78_04315 PF00905 Penicillin binding protein transpeptidase domain FDV78_04315 PF14814 Bifunctional transglycosylase second domain FDV78_04320 PF01734 Patatin-like phospholipase FDV78_04325 PF06434 Aconitate hydratase 2 N-terminus FDV78_04325 PF00330 Aconitase family (aconitate hydratase) FDV78_04325 PF11791 Aconitate B N-terminal domain FDV78_04330 PF06062 Uncharacterised protein family (UPF0231) FDV78_04335 PF00543 Nitrogen regulatory protein P-II FDV78_04340 PF00909 Ammonium Transporter Family FDV78_04345 PF13416 Bacterial extracellular solute-binding protein FDV78_04355 PF00005 ABC transporter FDV78_04355 PF08402 TOBE domain FDV78_04360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV78_04360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV78_04360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV78_04360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV78_04365 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FDV78_04365 PF06165 Glycosyltransferase family 36 FDV78_04370 PF02838 Glycosyl hydrolase family 20, domain 2 FDV78_04370 PF00728 Glycosyl hydrolase family 20, catalytic domain FDV78_04375 PF01869 BadF/BadG/BcrA/BcrD ATPase family FDV78_04385 PF00005 ABC transporter FDV78_04385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_04390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_04390 PF00005 ABC transporter FDV78_04395 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_04395 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_04400 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_04405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_04410 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_04410 PF00512 His Kinase A (phospho-acceptor) domain FDV78_04410 PF00072 Response regulator receiver domain FDV78_04420 PF05175 Methyltransferase small domain FDV78_04420 PF08468 Methyltransferase small domain N-terminal FDV78_04425 PF01594 AI-2E family transporter FDV78_04430 PF00202 Aminotransferase class-III FDV78_04435 PF01521 Iron-sulphur cluster biosynthesis FDV78_04445 PF00873 AcrB/AcrD/AcrF family FDV78_04450 PF08525 Opacity-associated protein A N-terminal motif FDV78_04450 PF01476 LysM domain FDV78_04450 PF01551 Peptidase family M23 FDV78_04455 PF00579 tRNA synthetases class I (W and Y) FDV78_04465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FDV78_04470 PF13609 Gram-negative porin FDV78_04475 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV78_04475 PF03449 Transcription elongation factor, N-terminal FDV78_04480 PF01985 CRS1 / YhbY (CRM) domain FDV78_04485 PF01728 FtsJ-like methyltransferase FDV78_04490 PF17862 AAA+ lid domain FDV78_04490 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_04490 PF06480 FtsH Extracellular FDV78_04490 PF01434 Peptidase family M41 FDV78_04495 PF00809 Pterin binding enzyme FDV78_04500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV78_04500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV78_04500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV78_04500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV78_04510 PF03840 Preprotein translocase SecG subunit FDV78_04525 PF17384 RimP C-terminal SH3 domain FDV78_04525 PF02576 RimP N-terminal domain FDV78_04530 PF13184 NusA-like KH domain FDV78_04530 PF00575 S1 RNA binding domain FDV78_04530 PF08529 NusA N-terminal domain FDV78_04535 PF04760 Translation initiation factor IF-2, N-terminal region FDV78_04535 PF08364 Bacterial translation initiation factor IF-2 associated region FDV78_04535 PF00009 Elongation factor Tu GTP binding domain FDV78_04535 PF11987 Translation-initiation factor 2 FDV78_04540 PF02033 Ribosome-binding factor A FDV78_04545 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDV78_04545 PF09157 Pseudouridine synthase II TruB, C-terminal FDV78_04545 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDV78_04550 PF00312 Ribosomal protein S15 FDV78_04555 PF00575 S1 RNA binding domain FDV78_04555 PF03725 3' exoribonuclease family, domain 2 FDV78_04555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDV78_04555 PF00013 KH domain FDV78_04555 PF01138 3' exoribonuclease family, domain 1 FDV78_04560 PF13181 Tetratricopeptide repeat FDV78_04560 PF07719 Tetratricopeptide repeat FDV78_04570 PF01554 MatE FDV78_04575 PF01136 Peptidase family U32 FDV78_04580 PF01136 Peptidase family U32 FDV78_04585 PF03707 Bacterial signalling protein N terminal repeat FDV78_04585 PF00563 EAL domain FDV78_04585 PF00990 Diguanylate cyclase, GGDEF domain FDV78_04590 PF02036 SCP-2 sterol transfer family FDV78_04595 PF13508 Acetyltransferase (GNAT) domain FDV78_04615 PF00009 Elongation factor Tu GTP binding domain FDV78_04615 PF03144 Elongation factor Tu domain 2 FDV78_04615 PF16658 Class II release factor RF3, C-terminal domain FDV78_04625 PF01026 TatD related DNase FDV78_04630 PF07670 Nucleoside recognition FDV78_04630 PF07662 Na+ dependent nucleoside transporter C-terminus FDV78_04630 PF01773 Na+ dependent nucleoside transporter N-terminus FDV78_04635 PF01791 DeoC/LacD family aldolase FDV78_04640 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FDV78_04640 PF02885 Glycosyl transferase family, helical bundle domain FDV78_04640 PF00591 Glycosyl transferase family, a/b domain FDV78_04645 PF01676 Metalloenzyme superfamily FDV78_04650 PF01048 Phosphorylase superfamily FDV78_04660 PF18429 Domain of unknown function (DUF5609) FDV78_04670 PF18073 Rubredoxin metal binding domain FDV78_04675 PF03144 Elongation factor Tu domain 2 FDV78_04675 PF00679 Elongation factor G C-terminus FDV78_04675 PF14492 Elongation Factor G, domain II FDV78_04675 PF03764 Elongation factor G, domain IV FDV78_04675 PF00009 Elongation factor Tu GTP binding domain FDV78_04680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_04680 PF03466 LysR substrate binding domain FDV78_04690 PF00501 AMP-binding enzyme FDV78_04695 PF02805 Metal binding domain of Ada FDV78_04695 PF12833 Helix-turn-helix domain FDV78_04720 PF04972 BON domain FDV78_04720 PF13629 Pilus formation protein N terminal region FDV78_04720 PF00263 Bacterial type II and III secretion system protein FDV78_04750 PF00437 Type II/IV secretion system protein FDV78_04780 PF03466 LysR substrate binding domain FDV78_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_04785 PF13520 Amino acid permease FDV78_04790 PF04074 YhcH/YjgK/YiaL FDV78_04795 PF16353 Domain of unknown function(DUF4981) FDV78_04795 PF02929 Beta galactosidase small chain FDV78_04795 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDV78_04795 PF00703 Glycosyl hydrolases family 2 FDV78_04795 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDV78_04800 PF00356 Bacterial regulatory proteins, lacI family FDV78_04810 PF16363 GDP-mannose 4,6 dehydratase FDV78_04815 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FDV78_04815 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FDV78_04820 PF00288 GHMP kinases N terminal domain FDV78_04820 PF08544 GHMP kinases C terminal FDV78_04820 PF10509 Galactokinase galactose-binding signature FDV78_04825 PF01263 Aldose 1-epimerase FDV78_04830 PF00356 Bacterial regulatory proteins, lacI family FDV78_04845 PF00356 Bacterial regulatory proteins, lacI family FDV78_04850 PF01588 Putative tRNA binding domain FDV78_04865 PF01544 CorA-like Mg2+ transporter protein FDV78_04870 PF01266 FAD dependent oxidoreductase FDV78_04870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDV78_04875 PF00455 DeoR C terminal sensor domain FDV78_04875 PF08220 DeoR-like helix-turn-helix domain FDV78_04880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDV78_04880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDV78_04885 PF00230 Major intrinsic protein FDV78_04900 PF07690 Major Facilitator Superfamily FDV78_04905 PF03009 Glycerophosphoryl diester phosphodiesterase family FDV78_04910 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FDV78_04910 PF14602 Hexapeptide repeat of succinyl-transferase FDV78_04915 PF07130 YebG protein FDV78_04920 PF03466 LysR substrate binding domain FDV78_04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_04930 PF00884 Sulfatase FDV78_04930 PF11893 Domain of unknown function (DUF3413) FDV78_04935 PF17946 RecC C-terminal domain FDV78_04945 PF12705 PD-(D/E)XK nuclease superfamily FDV78_04945 PF00580 UvrD/REP helicase N-terminal domain FDV78_04945 PF13361 UvrD-like helicase C-terminal domain FDV78_04950 PF13538 UvrD-like helicase C-terminal domain FDV78_04960 PF00583 Acetyltransferase (GNAT) family FDV78_04960 PF00696 Amino acid kinase family FDV78_04975 PF06725 3D domain FDV78_04975 PF03562 MltA specific insert domain FDV78_04980 PF00899 ThiF family FDV78_04985 PF02657 Fe-S metabolism associated domain FDV78_04990 PF17158 Membrane-associated sensor, integral membrane domain FDV78_04990 PF00990 Diguanylate cyclase, GGDEF domain FDV78_04995 PF00266 Aminotransferase class-V FDV78_05000 PF01965 DJ-1/PfpI family FDV78_05005 PF02558 Ketopantoate reductase PanE/ApbA FDV78_05005 PF08546 Ketopantoate reductase PanE/ApbA C terminal FDV78_05010 PF03502 Nucleoside-specific channel-forming protein, Tsx FDV78_05030 PF04545 Sigma-70, region 4 FDV78_05030 PF04542 Sigma-70 region 2 FDV78_05040 PF07690 Major Facilitator Superfamily FDV78_05045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV78_05050 PF03923 Uncharacterized lipoprotein FDV78_05050 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDV78_05055 PF05175 Methyltransferase small domain FDV78_05060 PF01722 BolA-like protein FDV78_05065 PF11973 NQRA C-terminal domain FDV78_05065 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FDV78_05070 PF03116 NQR2, RnfD, RnfE family FDV78_05075 PF04205 FMN-binding domain FDV78_05080 PF02508 Rnf-Nqr subunit, membrane protein FDV78_05085 PF02508 Rnf-Nqr subunit, membrane protein FDV78_05090 PF00175 Oxidoreductase NAD-binding domain FDV78_05090 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_05090 PF00970 Oxidoreductase FAD-binding domain FDV78_05095 PF02424 ApbE family FDV78_05135 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FDV78_05135 PF14490 Helix-hairpin-helix containing domain FDV78_05135 PF13538 UvrD-like helicase C-terminal domain FDV78_05155 PF18766 SWI2/SNF2 ATPase FDV78_05155 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDV78_05155 PF11867 Domain of unknown function (DUF3387) FDV78_05160 PF13286 Phosphohydrolase-associated domain FDV78_05160 PF01966 HD domain FDV78_05165 PF01420 Type I restriction modification DNA specificity domain FDV78_05170 PF12161 HsdM N-terminal domain FDV78_05170 PF02384 N-6 DNA Methylase FDV78_05185 PF00817 impB/mucB/samB family FDV78_05185 PF11799 impB/mucB/samB family C-terminal domain FDV78_05185 PF11798 IMS family HHH motif FDV78_05190 PF11799 impB/mucB/samB family C-terminal domain FDV78_05190 PF11798 IMS family HHH motif FDV78_05190 PF00817 impB/mucB/samB family FDV78_05195 PF09382 RQC domain FDV78_05195 PF00570 HRDC domain FDV78_05195 PF00271 Helicase conserved C-terminal domain FDV78_05195 PF16124 RecQ zinc-binding FDV78_05195 PF00270 DEAD/DEAH box helicase FDV78_05200 PF03449 Transcription elongation factor, N-terminal FDV78_05200 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV78_05215 PF00209 Sodium:neurotransmitter symporter family FDV78_05225 PF06786 Uncharacterised protein family (UPF0253) FDV78_05235 PF03129 Anticodon binding domain FDV78_05235 PF04073 Aminoacyl-tRNA editing domain FDV78_05235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV78_05240 PF01980 tRNA-methyltransferase O FDV78_05240 PF18389 TrmO C-terminal domain FDV78_05245 PF01197 Ribosomal protein L31 FDV78_05250 PF00444 Ribosomal protein L36 FDV78_05260 PF03806 AbgT putative transporter family FDV78_05265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDV78_05290 PF04287 tRNA pseudouridine synthase C FDV78_05295 PF00849 RNA pseudouridylate synthase FDV78_05300 PF11944 Protein of unknown function (DUF3461) FDV78_05305 PF01966 HD domain FDV78_05305 PF01909 Nucleotidyltransferase domain FDV78_05305 PF08335 GlnD PII-uridylyltransferase FDV78_05305 PF01842 ACT domain FDV78_05310 PF00557 Metallopeptidase family M24 FDV78_05315 PF00318 Ribosomal protein S2 FDV78_05320 PF00889 Elongation factor TS FDV78_05325 PF00696 Amino acid kinase family FDV78_05330 PF01765 Ribosome recycling factor FDV78_05335 PF01255 Putative undecaprenyl diphosphate synthase FDV78_05345 PF13288 DXP reductoisomerase C-terminal domain FDV78_05345 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDV78_05345 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDV78_05350 PF17820 PDZ domain FDV78_05350 PF02163 Peptidase family M50 FDV78_05355 PF07244 Surface antigen variable number repeat FDV78_05355 PF01103 Surface antigen FDV78_05360 PF03938 Outer membrane protein (OmpH-like) FDV78_05365 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_05365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDV78_05370 PF07977 FabA-like domain FDV78_05375 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_05375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDV78_05380 PF02684 Lipid-A-disaccharide synthetase FDV78_05385 PF01351 Ribonuclease HII FDV78_05390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV78_05390 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV78_05390 PF01336 OB-fold nucleic acid binding domain FDV78_05390 PF02811 PHP domain FDV78_05390 PF14579 Helix-hairpin-helix motif FDV78_05395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDV78_05400 PF09179 TilS substrate binding domain FDV78_05400 PF01171 PP-loop family FDV78_05400 PF11734 TilS substrate C-terminal domain FDV78_05405 PF00034 Cytochrome c FDV78_05410 PF00543 Nitrogen regulatory protein P-II FDV78_05415 PF03372 Endonuclease/Exonuclease/phosphatase family FDV78_05425 PF01464 Transglycosylase SLT domain FDV78_05425 PF01476 LysM domain FDV78_05430 PF00753 Metallo-beta-lactamase superfamily FDV78_05430 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDV78_05435 PF08241 Methyltransferase domain FDV78_05440 PF00075 RNase H FDV78_05445 PF00929 Exonuclease FDV78_05465 PF00583 Acetyltransferase (GNAT) family FDV78_05470 PF00916 Sulfate permease family FDV78_05470 PF01740 STAS domain FDV78_05475 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_05475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_05475 PF09317 Domain of unknown function (DUF1974) FDV78_05475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_05480 PF13580 SIS domain FDV78_05485 PF13230 Glutamine amidotransferases class-II FDV78_05490 PF00551 Formyl transferase FDV78_05495 PF00586 AIR synthase related protein, N-terminal domain FDV78_05495 PF02769 AIR synthase related protein, C-terminal domain FDV78_05505 PF00860 Permease family FDV78_05520 PF03358 NADPH-dependent FMN reductase FDV78_05525 PF03960 ArsC family FDV78_05530 PF13181 Tetratricopeptide repeat FDV78_05530 PF01435 Peptidase family M48 FDV78_05540 PF01594 AI-2E family transporter FDV78_05545 PF00578 AhpC/TSA family FDV78_05550 PF01842 ACT domain FDV78_05555 PF00701 Dihydrodipicolinate synthetase family FDV78_05575 PF07687 Peptidase dimerisation domain FDV78_05575 PF01546 Peptidase family M20/M25/M40 FDV78_05580 PF03960 ArsC family FDV78_05605 PF11143 Protein of unknown function (DUF2919) FDV78_05610 PF04261 Dyp-type peroxidase family FDV78_05615 PF07196 Flagellin hook IN motif FDV78_05615 PF00700 Bacterial flagellin C-terminal helical region FDV78_05615 PF00669 Bacterial flagellin N-terminal helical region FDV78_05625 PF00700 Bacterial flagellin C-terminal helical region FDV78_05625 PF07196 Flagellin hook IN motif FDV78_05625 PF00669 Bacterial flagellin N-terminal helical region FDV78_05630 PF00669 Bacterial flagellin N-terminal helical region FDV78_05630 PF00700 Bacterial flagellin C-terminal helical region FDV78_05630 PF07196 Flagellin hook IN motif FDV78_05635 PF03646 FlaG protein FDV78_05640 PF02465 Flagellar hook-associated protein 2 N-terminus FDV78_05640 PF07195 Flagellar hook-associated protein 2 C-terminus FDV78_05640 PF07196 Flagellin hook IN motif FDV78_05650 PF02561 Flagellar protein FliS FDV78_05655 PF00158 Sigma-54 interaction domain FDV78_05655 PF02954 Bacterial regulatory protein, Fis family FDV78_05655 PF06490 Flagellar regulatory protein FleQ FDV78_05660 PF00512 His Kinase A (phospho-acceptor) domain FDV78_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_05665 PF00158 Sigma-54 interaction domain FDV78_05665 PF00072 Response regulator receiver domain FDV78_05665 PF02954 Bacterial regulatory protein, Fis family FDV78_05670 PF02049 Flagellar hook-basal body complex protein FliE FDV78_05675 PF01514 Secretory protein of YscJ/FliF family FDV78_05675 PF08345 Flagellar M-ring protein C-terminal FDV78_05680 PF14842 FliG N-terminal domain FDV78_05680 PF14841 FliG middle domain FDV78_05680 PF01706 FliG C-terminal domain FDV78_05690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_05690 PF18269 T3SS EscN ATPase C-terminal domain FDV78_05710 PF02154 Flagellar motor switch protein FliM FDV78_05710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV78_05715 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV78_05720 PF04347 Flagellar biosynthesis protein, FliO FDV78_05725 PF00813 FliP family FDV78_05730 PF01313 Bacterial export proteins, family 3 FDV78_05735 PF01311 Bacterial export proteins, family 1 FDV78_05740 PF01312 FlhB HrpN YscU SpaS Family FDV78_05745 PF00771 FHIPEP family FDV78_05750 PF00448 SRP54-type protein, GTPase domain FDV78_05755 PF10609 NUBPL iron-transfer P-loop NTPase FDV78_05760 PF04542 Sigma-70 region 2 FDV78_05760 PF04545 Sigma-70, region 4 FDV78_05760 PF04539 Sigma-70 region 3 FDV78_05765 PF00072 Response regulator receiver domain FDV78_05770 PF04344 Chemotaxis phosphatase, CheZ FDV78_05775 PF02895 Signal transducing histidine kinase, homodimeric domain FDV78_05775 PF01584 CheW-like domain FDV78_05775 PF01627 Hpt domain FDV78_05775 PF00072 Response regulator receiver domain FDV78_05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_05780 PF01339 CheB methylesterase FDV78_05780 PF00072 Response regulator receiver domain FDV78_05785 PF13614 AAA domain FDV78_05795 PF01584 CheW-like domain FDV78_05805 PF00005 ABC transporter FDV78_05810 PF03379 CcmB protein FDV78_05815 PF01578 Cytochrome C assembly protein FDV78_05820 PF04995 Heme exporter protein D (CcmD) FDV78_05825 PF03100 CcmE FDV78_05830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDV78_05830 PF01578 Cytochrome C assembly protein FDV78_05835 PF08534 Redoxin FDV78_05840 PF03918 Cytochrome C biogenesis protein FDV78_05850 PF04333 MlaA lipoprotein FDV78_05855 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV78_05860 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV78_05870 PF08281 Sigma-70, region 4 FDV78_05870 PF04542 Sigma-70 region 2 FDV78_05880 PF00108 Thiolase, N-terminal domain FDV78_05880 PF02803 Thiolase, C-terminal domain FDV78_05885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDV78_05885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDV78_05885 PF00378 Enoyl-CoA hydratase/isomerase FDV78_05895 PF00675 Insulinase (Peptidase family M16) FDV78_05895 PF16187 Middle or third domain of peptidase_M16 FDV78_05895 PF05193 Peptidase M16 inactive domain FDV78_05900 PF00300 Histidine phosphatase superfamily (branch 1) FDV78_05905 PF01713 Smr domain FDV78_05910 PF05175 Methyltransferase small domain FDV78_05915 PF01264 Chorismate synthase FDV78_05920 PF03458 UPF0126 domain FDV78_05930 PF04315 Elongation factor P hydroxylase FDV78_05935 PF08891 YfcL protein FDV78_05945 PF03358 NADPH-dependent FMN reductase FDV78_05950 PF01266 FAD dependent oxidoreductase FDV78_05950 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDV78_05955 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV78_05955 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV78_05965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_05965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV78_05965 PF11890 Domain of unknown function (DUF3410) FDV78_05970 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV78_05970 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV78_05980 PF01416 tRNA pseudouridine synthase FDV78_05985 PF01039 Carboxyl transferase domain FDV78_05985 PF17848 Acetyl-coA carboxylase zinc finger domain FDV78_05990 PF02875 Mur ligase family, glutamate ligase domain FDV78_05990 PF08245 Mur ligase middle domain FDV78_05995 PF05036 Sporulation related domain FDV78_06000 PF02674 Colicin V production protein FDV78_06005 PF00156 Phosphoribosyl transferase domain FDV78_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_06010 PF03466 LysR substrate binding domain FDV78_06015 PF00072 Response regulator receiver domain FDV78_06025 PF04304 Protein of unknown function (DUF454) FDV78_06030 PF00156 Phosphoribosyl transferase domain FDV78_06035 PF12169 DNA polymerase III subunits gamma and tau domain III FDV78_06035 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FDV78_06035 PF12170 DNA polymerase III tau subunit V interacting with alpha FDV78_06040 PF02575 YbaB/EbfC DNA-binding family FDV78_06045 PF13662 Toprim domain FDV78_06045 PF02132 RecR protein FDV78_06050 PF00230 Major intrinsic protein FDV78_06060 PF01042 Endoribonuclease L-PSP FDV78_06065 PF03313 Serine dehydratase alpha chain FDV78_06075 PF03692 Putative zinc- or iron-chelating domain FDV78_06080 PF04226 Transglycosylase associated protein FDV78_06085 PF03692 Putative zinc- or iron-chelating domain FDV78_06090 PF00924 Mechanosensitive ion channel FDV78_06090 PF05552 Conserved TM helix FDV78_06100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_06110 PF00245 Alkaline phosphatase FDV78_06130 PF13847 Methyltransferase domain FDV78_06135 PF00672 HAMP domain FDV78_06135 PF02743 Cache domain FDV78_06135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_06140 PF01263 Aldose 1-epimerase FDV78_06145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV78_06145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV78_06150 PF01641 SelR domain FDV78_06160 PF07023 Protein of unknown function (DUF1315) FDV78_06165 PF00710 Asparaginase, N-terminal FDV78_06165 PF17763 Glutaminase/Asparaginase C-terminal domain FDV78_06170 PF01343 Peptidase family S49 FDV78_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_06175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV78_06180 PF00881 Nitroreductase family FDV78_06185 PF01751 Toprim domain FDV78_06185 PF01131 DNA topoisomerase FDV78_06200 PF00106 short chain dehydrogenase FDV78_06205 PF00850 Histone deacetylase domain FDV78_06235 PF14659 Phage integrase, N-terminal SAM-like domain FDV78_06235 PF00589 Phage integrase family FDV78_06270 PF00884 Sulfatase FDV78_06270 PF11893 Domain of unknown function (DUF3413) FDV78_06275 PF07208 Protein of unknown function (DUF1414) FDV78_06280 PF04245 37-kD nucleoid-associated bacterial protein FDV78_06295 PF03553 Na+/H+ antiporter family FDV78_06300 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV78_06300 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV78_06305 PF00027 Cyclic nucleotide-binding domain FDV78_06305 PF00520 Ion transport protein FDV78_06310 PF01914 MarC family integral membrane protein FDV78_06315 PF00465 Iron-containing alcohol dehydrogenase FDV78_06315 PF00171 Aldehyde dehydrogenase family FDV78_06330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDV78_06330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDV78_06335 PF00462 Glutaredoxin FDV78_06345 PF13726 Na+-H+ antiporter family FDV78_06345 PF03553 Na+/H+ antiporter family FDV78_06350 PF00929 Exonuclease FDV78_06365 PF18393 MotY N-terminal domain FDV78_06365 PF00691 OmpA family FDV78_06370 PF10952 Protein of unknown function (DUF2753) FDV78_06375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_06380 PF00633 Helix-hairpin-helix motif FDV78_06380 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV78_06380 PF10576 Iron-sulfur binding domain of endonuclease III FDV78_06385 PF02508 Rnf-Nqr subunit, membrane protein FDV78_06390 PF04205 FMN-binding domain FDV78_06395 PF03116 NQR2, RnfD, RnfE family FDV78_06400 PF12838 4Fe-4S dicluster domain FDV78_06400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDV78_06400 PF10531 SLBB domain FDV78_06400 PF13375 RnfC Barrel sandwich hybrid domain FDV78_06405 PF04060 Putative Fe-S cluster FDV78_06410 PF02508 Rnf-Nqr subunit, membrane protein FDV78_06540 PF04002 RadC-like JAB domain FDV78_06570 PF00589 Phage integrase family FDV78_06570 PF13356 Arm DNA-binding domain FDV78_06585 PF02151 UvrB/uvrC motif FDV78_06585 PF04851 Type III restriction enzyme, res subunit FDV78_06585 PF12344 Ultra-violet resistance protein B FDV78_06585 PF00271 Helicase conserved C-terminal domain FDV78_06585 PF17757 UvrB interaction domain FDV78_06590 PF00072 Response regulator receiver domain FDV78_06590 PF02954 Bacterial regulatory protein, Fis family FDV78_06590 PF00158 Sigma-54 interaction domain FDV78_06595 PF01627 Hpt domain FDV78_06600 PF01933 Uncharacterised protein family UPF0052 FDV78_06605 PF06463 Molybdenum Cofactor Synthesis C FDV78_06605 PF04055 Radical SAM superfamily FDV78_06610 PF00994 Probable molybdopterin binding domain FDV78_06615 PF01967 MoaC family FDV78_06620 PF02597 ThiS family FDV78_06625 PF02391 MoaE protein FDV78_06630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_06635 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_06640 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_06640 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_06645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_06645 PF00005 ABC transporter FDV78_06650 PF00005 ABC transporter FDV78_06650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_06655 PF13409 Glutathione S-transferase, N-terminal domain FDV78_06665 PF13194 Domain of unknown function (DUF4010) FDV78_06670 PF07085 DRTGG domain FDV78_06670 PF01515 Phosphate acetyl/butaryl transferase FDV78_06675 PF00871 Acetokinase family FDV78_06680 PF04217 Protein of unknown function, DUF412 FDV78_06690 PF02653 Branched-chain amino acid transport system / permease component FDV78_06695 PF00005 ABC transporter FDV78_06700 PF02903 Alpha amylase, N-terminal ig-like domain FDV78_06700 PF00128 Alpha amylase, catalytic domain FDV78_06705 PF00990 Diguanylate cyclase, GGDEF domain FDV78_06705 PF00072 Response regulator receiver domain FDV78_06710 PF01207 Dihydrouridine synthase (Dus) FDV78_06715 PF02810 SEC-C motif FDV78_06715 PF03695 Uncharacterised protein family (UPF0149) FDV78_06720 PF02600 Disulfide bond formation protein DsbB FDV78_06725 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FDV78_06730 PF00392 Bacterial regulatory proteins, gntR family FDV78_06730 PF07840 FadR C-terminal domain FDV78_06740 PF09334 tRNA synthetases class I (M) FDV78_06740 PF01588 Putative tRNA binding domain FDV78_06745 PF10609 NUBPL iron-transfer P-loop NTPase FDV78_06750 PF00485 Phosphoribulokinase / Uridine kinase family FDV78_06765 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FDV78_06765 PF12557 Cob(I)alamin adenosyltransferase N terminal FDV78_06770 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDV78_06775 PF01740 STAS domain FDV78_06775 PF00916 Sulfate permease family FDV78_06785 PF12111 Polyribonucleotide phosphorylase C terminal FDV78_06785 PF10150 Ribonuclease E/G family FDV78_06785 PF00575 S1 RNA binding domain FDV78_06800 PF01479 S4 domain FDV78_06800 PF00849 RNA pseudouridylate synthase FDV78_06805 PF02545 Maf-like protein FDV78_06810 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDV78_06815 PF01783 Ribosomal L32p protein family FDV78_06820 PF02504 Fatty acid synthesis protein FDV78_06825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDV78_06825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDV78_06830 PF00698 Acyl transferase domain FDV78_06840 PF00550 Phosphopantetheine attachment site FDV78_06845 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV78_06845 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV78_06850 PF01063 Amino-transferase class IV FDV78_06855 PF02618 YceG-like family FDV78_06860 PF02223 Thymidylate kinase FDV78_06865 PF09115 DNA polymerase III, delta subunit, C terminal FDV78_06870 PF01026 TatD related DNase FDV78_06875 PF02378 Phosphotransferase system, EIIC FDV78_06875 PF00367 phosphotransferase system, EIIB FDV78_06895 PF00209 Sodium:neurotransmitter symporter family FDV78_06910 PF01734 Patatin-like phospholipase FDV78_06915 PF02887 Pyruvate kinase, alpha/beta domain FDV78_06915 PF00224 Pyruvate kinase, barrel domain FDV78_06920 PF00480 ROK family FDV78_06925 PF01584 CheW-like domain FDV78_06925 PF00072 Response regulator receiver domain FDV78_06930 PF01336 OB-fold nucleic acid binding domain FDV78_06930 PF02811 PHP domain FDV78_06930 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV78_06930 PF14579 Helix-hairpin-helix motif FDV78_06930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV78_06945 PF00106 short chain dehydrogenase FDV78_06950 PF08496 Peptidase family S49 N-terminal FDV78_06950 PF01343 Peptidase family S49 FDV78_06955 PF02224 Cytidylate kinase FDV78_06960 PF00575 S1 RNA binding domain FDV78_06965 PF00216 Bacterial DNA-binding protein FDV78_06970 PF06305 Lipopolysaccharide assembly protein A domain FDV78_06975 PF18073 Rubredoxin metal binding domain FDV78_06980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDV78_06985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_06995 PF01370 NAD dependent epimerase/dehydratase family FDV78_07000 PF00535 Glycosyl transferase family 2 FDV78_07010 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FDV78_07020 PF02470 MlaD protein FDV78_07025 PF04403 Paraquat-inducible protein A FDV78_07030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV78_07035 PF00034 Cytochrome c FDV78_07040 PF00384 Molybdopterin oxidoreductase FDV78_07040 PF01568 Molydopterin dinucleotide binding domain FDV78_07040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_07045 PF03916 Polysulphide reductase, NrfD FDV78_07050 PF13247 4Fe-4S dicluster domain FDV78_07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_07055 PF00512 His Kinase A (phospho-acceptor) domain FDV78_07060 PF00072 Response regulator receiver domain FDV78_07060 PF00196 Bacterial regulatory proteins, luxR family FDV78_07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_07065 PF03466 LysR substrate binding domain FDV78_07075 PF11412 Disulphide bond corrector protein DsbC FDV78_07075 PF02683 Cytochrome C biogenesis protein transmembrane region FDV78_07080 PF00085 Thioredoxin FDV78_07100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_07110 PF02687 FtsX-like permease family FDV78_07110 PF00005 ABC transporter FDV78_07110 PF12704 MacB-like periplasmic core domain FDV78_07115 PF00005 ABC transporter FDV78_07115 PF02687 FtsX-like permease family FDV78_07115 PF12704 MacB-like periplasmic core domain FDV78_07120 PF12704 MacB-like periplasmic core domain FDV78_07120 PF02687 FtsX-like permease family FDV78_07120 PF00005 ABC transporter FDV78_07170 PF01810 LysE type translocator FDV78_07185 PF01717 Cobalamin-independent synthase, Catalytic domain FDV78_07185 PF08267 Cobalamin-independent synthase, N-terminal domain FDV78_07195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_07195 PF00529 HlyD membrane-fusion protein of T1SS FDV78_07200 PF03466 LysR substrate binding domain FDV78_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_07215 PF00672 HAMP domain FDV78_07215 PF00512 His Kinase A (phospho-acceptor) domain FDV78_07220 PF00072 Response regulator receiver domain FDV78_07220 PF00486 Transcriptional regulatory protein, C terminal FDV78_07230 PF00672 HAMP domain FDV78_07230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_07235 PF08497 Radical SAM N-terminal FDV78_07235 PF11842 Domain of unknown function (DUF3362) FDV78_07235 PF04055 Radical SAM superfamily FDV78_07240 PF00360 Phytochrome region FDV78_07240 PF01590 GAF domain FDV78_07240 PF00990 Diguanylate cyclase, GGDEF domain FDV78_07240 PF00563 EAL domain FDV78_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_07255 PF03466 LysR substrate binding domain FDV78_07265 PF01717 Cobalamin-independent synthase, Catalytic domain FDV78_07265 PF08267 Cobalamin-independent synthase, N-terminal domain FDV78_07275 PF03795 YCII-related domain FDV78_07280 PF03061 Thioesterase superfamily FDV78_07285 PF04279 Intracellular septation protein A FDV78_07295 PF00072 Response regulator receiver domain FDV78_07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_07300 PF17327 Acyl homoserine lactone synthase FDV78_07305 PF00375 Sodium:dicarboxylate symporter family FDV78_07315 PF13193 AMP-binding enzyme C-terminal domain FDV78_07315 PF00501 AMP-binding enzyme FDV78_07320 PF00027 Cyclic nucleotide-binding domain FDV78_07320 PF13545 Crp-like helix-turn-helix domain FDV78_07330 PF00290 Tryptophan synthase alpha chain FDV78_07335 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_07340 PF00218 Indole-3-glycerol phosphate synthase FDV78_07340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDV78_07345 PF02885 Glycosyl transferase family, helical bundle domain FDV78_07345 PF00591 Glycosyl transferase family, a/b domain FDV78_07350 PF00117 Glutamine amidotransferase class-I FDV78_07355 PF00425 chorismate binding enzyme FDV78_07355 PF04715 Anthranilate synthase component I, N terminal region FDV78_07360 PF08056 Tryptophan operon leader peptide FDV78_07365 PF02811 PHP domain FDV78_07370 PF01300 Telomere recombination FDV78_07380 PF00849 RNA pseudouridylate synthase FDV78_07380 PF01479 S4 domain FDV78_07390 PF04269 Protein of unknown function, DUF440 FDV78_07395 PF01132 Elongation factor P (EF-P) OB domain FDV78_07395 PF09285 Elongation factor P, C-terminal FDV78_07395 PF08207 Elongation factor P (EF-P) KOW-like domain FDV78_07405 PF00136 DNA polymerase family B FDV78_07405 PF03104 DNA polymerase family B, exonuclease domain FDV78_07410 PF00072 Response regulator receiver domain FDV78_07410 PF00196 Bacterial regulatory proteins, luxR family FDV78_07415 PF01541 GIY-YIG catalytic domain FDV78_07415 PF02151 UvrB/uvrC motif FDV78_07415 PF08459 UvrC Helix-hairpin-helix N-terminal FDV78_07420 PF01066 CDP-alcohol phosphatidyltransferase FDV78_07445 PF00202 Aminotransferase class-III FDV78_07450 PF03435 Saccharopine dehydrogenase NADP binding domain FDV78_07450 PF16653 Saccharopine dehydrogenase C-terminal domain FDV78_07455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV78_07470 PF00994 Probable molybdopterin binding domain FDV78_07480 PF00268 Ribonucleotide reductase, small chain FDV78_07485 PF00317 Ribonucleotide reductase, all-alpha domain FDV78_07485 PF03477 ATP cone domain FDV78_07485 PF02867 Ribonucleotide reductase, barrel domain FDV78_07495 PF03989 DNA gyrase C-terminal domain, beta-propeller FDV78_07495 PF00521 DNA gyrase/topoisomerase IV, subunit A FDV78_07510 PF02335 Cytochrome c552 FDV78_07520 PF13247 4Fe-4S dicluster domain FDV78_07525 PF03916 Polysulphide reductase, NrfD FDV78_07530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDV78_07530 PF01578 Cytochrome C assembly protein FDV78_07535 PF08534 Redoxin FDV78_07540 PF03918 Cytochrome C biogenesis protein FDV78_07550 PF00925 GTP cyclohydrolase II FDV78_07575 PF01471 Putative peptidoglycan binding domain FDV78_07575 PF03734 L,D-transpeptidase catalytic domain FDV78_07580 PF05951 Bacterial protein of unknown function (DUF882) FDV78_07585 PF00753 Metallo-beta-lactamase superfamily FDV78_07600 PF03480 Bacterial extracellular solute-binding protein, family 7 FDV78_07610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDV78_07615 PF07730 Histidine kinase FDV78_07615 PF17200 Single Cache domain 2 FDV78_07620 PF00072 Response regulator receiver domain FDV78_07620 PF00196 Bacterial regulatory proteins, luxR family FDV78_07625 PF01047 MarR family FDV78_07630 PF02028 BCCT, betaine/carnitine/choline family transporter FDV78_07635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_07635 PF00672 HAMP domain FDV78_07655 PF00155 Aminotransferase class I and II FDV78_07680 PF00392 Bacterial regulatory proteins, gntR family FDV78_07680 PF00155 Aminotransferase class I and II FDV78_07690 PF00152 tRNA synthetases class II (D, K and N) FDV78_07690 PF01336 OB-fold nucleic acid binding domain FDV78_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_07695 PF12729 Four helix bundle sensory module for signal transduction FDV78_07695 PF00672 HAMP domain FDV78_07700 PF13356 Arm DNA-binding domain FDV78_07700 PF00589 Phage integrase family FDV78_07715 PF05063 MT-A70 FDV78_07725 PF10065 Uncharacterized conserved protein (DUF2303) FDV78_07760 PF02092 Glycyl-tRNA synthetase beta subunit FDV78_08020 PF01242 6-pyruvoyl tetrahydropterin synthase FDV78_08030 PF04940 Sensors of blue-light using FAD FDV78_08030 PF00563 EAL domain FDV78_08035 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_08035 PF01610 Transposase FDV78_08035 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_08040 PF03315 Serine dehydratase beta chain FDV78_08040 PF03313 Serine dehydratase alpha chain FDV78_08045 PF03222 Tryptophan/tyrosine permease family FDV78_08050 PF00293 NUDIX domain FDV78_08060 PF00072 Response regulator receiver domain FDV78_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_08060 PF00512 His Kinase A (phospho-acceptor) domain FDV78_08060 PF09308 LuxQ, periplasmic FDV78_08065 PF00425 chorismate binding enzyme FDV78_08065 PF04715 Anthranilate synthase component I, N terminal region FDV78_08085 PF04317 YcjX-like family, DUF463 FDV78_08090 PF05128 Domain of unknown function (DUF697) FDV78_08095 PF00158 Sigma-54 interaction domain FDV78_08095 PF18024 Helix-turn-helix domain FDV78_08100 PF13302 Acetyltransferase (GNAT) domain FDV78_08115 PF00589 Phage integrase family FDV78_08115 PF13495 Phage integrase, N-terminal SAM-like domain FDV78_08225 PF08351 Domain of unknown function (DUF1726) FDV78_08225 PF17176 tRNA-binding domain FDV78_08225 PF05127 Helicase FDV78_08225 PF13718 GNAT acetyltransferase 2 FDV78_08590 PF00583 Acetyltransferase (GNAT) family FDV78_08635 PF00293 NUDIX domain FDV78_08635 PF13344 Haloacid dehalogenase-like hydrolase FDV78_08695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_08735 PF00583 Acetyltransferase (GNAT) family FDV78_08795 PF01809 Putative membrane protein insertion efficiency factor FDV78_08880 PF00795 Carbon-nitrogen hydrolase FDV78_08920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_09030 PF07411 Domain of unknown function (DUF1508) FDV78_09045 PF12833 Helix-turn-helix domain FDV78_09045 PF02311 AraC-like ligand binding domain FDV78_09050 PF00293 NUDIX domain FDV78_09165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FDV78_09330 PF00583 Acetyltransferase (GNAT) family FDV78_09340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_09340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV78_09595 PF13302 Acetyltransferase (GNAT) domain FDV78_09615 PF03553 Na+/H+ antiporter family FDV78_09620 PF00120 Glutamine synthetase, catalytic domain FDV78_09630 PF07722 Peptidase C26 FDV78_09635 PF07883 Cupin domain FDV78_09635 PF01381 Helix-turn-helix FDV78_09640 PF00171 Aldehyde dehydrogenase family FDV78_09645 PF01266 FAD dependent oxidoreductase FDV78_09650 PF00795 Carbon-nitrogen hydrolase FDV78_09655 PF04371 Porphyromonas-type peptidyl-arginine deiminase FDV78_09660 PF00171 Aldehyde dehydrogenase family FDV78_09665 PF00202 Aminotransferase class-III FDV78_09670 PF01368 DHH family FDV78_09670 PF02833 DHHA2 domain FDV78_09680 PF00563 EAL domain FDV78_09680 PF00196 Bacterial regulatory proteins, luxR family FDV78_09695 PF02272 DHHA1 domain FDV78_09695 PF01411 tRNA synthetases class II (A) FDV78_09695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV78_09700 PF12833 Helix-turn-helix domain FDV78_09710 PF01047 MarR family FDV78_09715 PF04237 YjbR FDV78_09725 PF01928 CYTH domain FDV78_09735 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_09735 PF12464 Maltose acetyltransferase FDV78_09750 PF00672 HAMP domain FDV78_09750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV78_09750 PF00072 Response regulator receiver domain FDV78_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_09750 PF01627 Hpt domain FDV78_09750 PF00512 His Kinase A (phospho-acceptor) domain FDV78_09755 PF03707 Bacterial signalling protein N terminal repeat FDV78_09755 PF00990 Diguanylate cyclase, GGDEF domain FDV78_09755 PF00563 EAL domain FDV78_09770 PF04204 Homoserine O-succinyltransferase FDV78_09785 PF13520 Amino acid permease FDV78_09795 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV78_09800 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FDV78_09805 PF01810 LysE type translocator FDV78_09815 PF01235 Sodium:alanine symporter family FDV78_09840 PF00884 Sulfatase FDV78_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_09845 PF08521 Two-component sensor kinase N-terminal FDV78_09845 PF00512 His Kinase A (phospho-acceptor) domain FDV78_09850 PF00486 Transcriptional regulatory protein, C terminal FDV78_09850 PF00072 Response regulator receiver domain FDV78_09870 PF00501 AMP-binding enzyme FDV78_09880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDV78_09885 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_09890 PF00571 CBS domain FDV78_09890 PF00005 ABC transporter FDV78_09905 PF02028 BCCT, betaine/carnitine/choline family transporter FDV78_09910 PF00583 Acetyltransferase (GNAT) family FDV78_09915 PF00202 Aminotransferase class-III FDV78_09920 PF06339 Ectoine synthase FDV78_09925 PF00696 Amino acid kinase family FDV78_09925 PF13840 ACT domain FDV78_09930 PF00034 Cytochrome c FDV78_09930 PF03150 Di-haem cytochrome c peroxidase FDV78_09945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_09960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDV78_09960 PF17203 Single cache domain 3 FDV78_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_09960 PF00989 PAS fold FDV78_09965 PF12431 Transcriptional regulator FDV78_09965 PF00072 Response regulator receiver domain FDV78_09970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FDV78_09970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FDV78_09975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDV78_09980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV78_09980 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FDV78_10010 PF01590 GAF domain FDV78_10010 PF00158 Sigma-54 interaction domain FDV78_10010 PF02954 Bacterial regulatory protein, Fis family FDV78_10015 PF00171 Aldehyde dehydrogenase family FDV78_10035 PF12833 Helix-turn-helix domain FDV78_10050 PF03958 Bacterial type II/III secretion system short domain FDV78_10050 PF00263 Bacterial type II and III secretion system protein FDV78_10055 PF16697 Inner membrane component of T3SS, cytoplasmic domain FDV78_10055 PF16693 Inner membrane component of T3SS, periplasmic domain FDV78_10065 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FDV78_10070 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) FDV78_10080 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI FDV78_10085 PF01514 Secretory protein of YscJ/FliF family FDV78_10095 PF02108 Flagellar assembly protein FliH FDV78_10105 PF02661 Fic/DOC family FDV78_10145 PF12146 Serine aminopeptidase, S33 FDV78_10150 PF12146 Serine aminopeptidase, S33 FDV78_10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_10155 PF03466 LysR substrate binding domain FDV78_10160 PF01312 FlhB HrpN YscU SpaS Family FDV78_10165 PF01311 Bacterial export proteins, family 1 FDV78_10170 PF01313 Bacterial export proteins, family 3 FDV78_10175 PF00813 FliP family FDV78_10180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV78_10195 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV78_10195 PF18269 T3SS EscN ATPase C-terminal domain FDV78_10195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_10200 PF07201 HrpJ-like domain FDV78_10205 PF09059 TyeA FDV78_10225 PF00771 FHIPEP family FDV78_10230 PF09621 Type III secretion system regulator (LcrR) FDV78_10235 PF07216 LcrG protein FDV78_10240 PF04792 V antigen (LcrV) protein FDV78_10245 PF07720 Tetratricopeptide repeat FDV78_10255 PF05844 YopD protein FDV78_10265 PF01925 Sulfite exporter TauE/SafE FDV78_10270 PF01970 Tripartite tricarboxylate transporter TctA family FDV78_10300 PF00285 Citrate synthase, C-terminal domain FDV78_10305 PF00694 Aconitase C-terminal domain FDV78_10305 PF00330 Aconitase family (aconitate hydratase) FDV78_10310 PF04303 PrpF protein FDV78_10315 PF00501 AMP-binding enzyme FDV78_10315 PF16177 Acetyl-coenzyme A synthetase N-terminus FDV78_10315 PF13193 AMP-binding enzyme C-terminal domain FDV78_10325 PF00089 Trypsin FDV78_10340 PF04055 Radical SAM superfamily FDV78_10345 PF06508 Queuosine biosynthesis protein QueC FDV78_10350 PF00990 Diguanylate cyclase, GGDEF domain FDV78_10350 PF17158 Membrane-associated sensor, integral membrane domain FDV78_10360 PF00691 OmpA family FDV78_10360 PF05736 OprF membrane domain FDV78_10375 PF00691 OmpA family FDV78_10375 PF05736 OprF membrane domain FDV78_10395 PF17785 PUA-like domain FDV78_10395 PF10672 S-adenosylmethionine-dependent methyltransferase FDV78_10400 PF02743 Cache domain FDV78_10400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_10400 PF00672 HAMP domain FDV78_10405 PF00708 Acylphosphatase FDV78_10410 PF04358 DsrC like protein FDV78_10420 PF01027 Inhibitor of apoptosis-promoting Bax1 FDV78_10425 PF00005 ABC transporter FDV78_10430 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_10435 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_10440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_10450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV78_10450 PF14824 Sirohaem biosynthesis protein central FDV78_10450 PF10414 Sirohaem synthase dimerisation region FDV78_10460 PF04461 Protein of unknown function (DUF520) FDV78_10465 PF00793 DAHP synthetase I family FDV78_10485 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FDV78_10485 PF01189 16S rRNA methyltransferase RsmB/F FDV78_10485 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FDV78_10495 PF02470 MlaD protein FDV78_10500 PF04403 Paraquat-inducible protein A FDV78_10505 PF00005 ABC transporter FDV78_10505 PF00664 ABC transporter transmembrane region FDV78_10510 PF13185 GAF domain FDV78_10515 PF17516 ProQ C-terminal domain FDV78_10515 PF04352 ProQ/FINO family FDV78_10520 PF17804 Tail specific protease N-terminal domain FDV78_10520 PF00595 PDZ domain FDV78_10520 PF03572 Peptidase family S41 FDV78_10520 PF11818 C-terminal domain of tail specific protease (DUF3340) FDV78_10530 PF01433 Peptidase family M1 domain FDV78_10530 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDV78_10530 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDV78_10540 PF05088 Bacterial NAD-glutamate dehydrogenase FDV78_10545 PF01180 Dihydroorotate dehydrogenase FDV78_10550 PF07126 Cell-division protein ZapC FDV78_10560 PF01170 Putative RNA methylase family UPF0020 FDV78_10560 PF02926 THUMP domain FDV78_10560 PF10672 S-adenosylmethionine-dependent methyltransferase FDV78_10580 PF04957 Ribosome modulation factor FDV78_10585 PF07977 FabA-like domain FDV78_10590 PF13654 AAA domain FDV78_10590 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV78_10595 PF06303 MatP N-terminal domain FDV78_10595 PF17414 MatP C-terminal ribbon-helix-helix domain FDV78_10615 PF09308 LuxQ, periplasmic FDV78_10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_10615 PF00512 His Kinase A (phospho-acceptor) domain FDV78_10615 PF00072 Response regulator receiver domain FDV78_10630 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV78_10645 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FDV78_10645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV78_10655 PF00403 Heavy-metal-associated domain FDV78_10670 PF13545 Crp-like helix-turn-helix domain FDV78_10670 PF00027 Cyclic nucleotide-binding domain FDV78_10675 PF00582 Universal stress protein family FDV78_10685 PF01171 PP-loop family FDV78_10705 PF00005 ABC transporter FDV78_10705 PF08402 TOBE domain FDV78_10710 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_10715 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_10720 PF13416 Bacterial extracellular solute-binding protein FDV78_10725 PF13416 Bacterial extracellular solute-binding protein FDV78_10730 PF02146 Sir2 family FDV78_10740 PF00909 Ammonium Transporter Family FDV78_10770 PF13247 4Fe-4S dicluster domain FDV78_10775 PF01568 Molydopterin dinucleotide binding domain FDV78_10775 PF00384 Molybdopterin oxidoreductase FDV78_10775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_10785 PF02613 Nitrate reductase delta subunit FDV78_10810 PF02634 FdhD/NarQ family FDV78_10815 PF12848 ABC transporter FDV78_10815 PF00005 ABC transporter FDV78_10825 PF00512 His Kinase A (phospho-acceptor) domain FDV78_10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_10830 PF00158 Sigma-54 interaction domain FDV78_10830 PF00072 Response regulator receiver domain FDV78_10830 PF02954 Bacterial regulatory protein, Fis family FDV78_10840 PF12849 PBP superfamily domain FDV78_10845 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_10850 PF08402 TOBE domain FDV78_10850 PF00005 ABC transporter FDV78_10855 PF12804 MobA-like NTP transferase domain FDV78_10860 PF03453 MoeA N-terminal region (domain I and II) FDV78_10860 PF00994 Probable molybdopterin binding domain FDV78_10860 PF03454 MoeA C-terminal region (domain IV) FDV78_10870 PF00480 ROK family FDV78_10910 PF00672 HAMP domain FDV78_10910 PF17202 Single cache domain 3 FDV78_10910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_10915 PF00877 NlpC/P60 family FDV78_10925 PF05230 MASE2 domain FDV78_10925 PF00990 Diguanylate cyclase, GGDEF domain FDV78_10930 PF00072 Response regulator receiver domain FDV78_10930 PF01339 CheB methylesterase FDV78_10935 PF03881 Fructosamine kinase FDV78_10945 PF00677 Lumazine binding domain FDV78_10950 PF01554 MatE FDV78_10960 PF01068 ATP dependent DNA ligase domain FDV78_10960 PF14743 DNA ligase OB-like domain FDV78_10965 PF01740 STAS domain FDV78_10975 PF02563 Polysaccharide biosynthesis/export protein FDV78_10975 PF10531 SLBB domain FDV78_10995 PF00158 Sigma-54 interaction domain FDV78_10995 PF02954 Bacterial regulatory protein, Fis family FDV78_10995 PF00072 Response regulator receiver domain FDV78_11005 PF00534 Glycosyl transferases group 1 FDV78_11005 PF13439 Glycosyltransferase Family 4 FDV78_11040 PF00534 Glycosyl transferases group 1 FDV78_11040 PF13439 Glycosyltransferase Family 4 FDV78_11045 PF00535 Glycosyl transferase family 2 FDV78_11050 PF02397 Bacterial sugar transferase FDV78_11060 PF02028 BCCT, betaine/carnitine/choline family transporter FDV78_11075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDV78_11075 PF04408 Helicase associated domain (HA2) FDV78_11075 PF11898 Domain of unknown function (DUF3418) FDV78_11075 PF00270 DEAD/DEAH box helicase FDV78_11075 PF00271 Helicase conserved C-terminal domain FDV78_11080 PF02525 Flavodoxin-like fold FDV78_11090 PF02613 Nitrate reductase delta subunit FDV78_11095 PF04976 DMSO reductase anchor subunit (DmsC) FDV78_11100 PF13247 4Fe-4S dicluster domain FDV78_11100 PF12800 4Fe-4S binding domain FDV78_11105 PF01568 Molydopterin dinucleotide binding domain FDV78_11105 PF00384 Molybdopterin oxidoreductase FDV78_11105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_11135 PF17151 Periplasmic sensor domain FDV78_11135 PF00990 Diguanylate cyclase, GGDEF domain FDV78_11145 PF00012 Hsp70 protein FDV78_11150 PF00012 Hsp70 protein FDV78_11180 PF00664 ABC transporter transmembrane region FDV78_11180 PF00005 ABC transporter FDV78_11185 PF00005 ABC transporter FDV78_11185 PF00664 ABC transporter transmembrane region FDV78_11210 PF03222 Tryptophan/tyrosine permease family FDV78_11215 PF00465 Iron-containing alcohol dehydrogenase FDV78_11225 PF01966 HD domain FDV78_11530 PF01037 Lrp/AsnC ligand binding domain FDV78_11565 PF00069 Protein kinase domain FDV78_11590 PF04717 Type VI secretion system, phage-baseplate injector FDV78_11595 PF05638 Type VI secretion system effector, Hcp FDV78_11600 PF07724 AAA domain (Cdc48 subfamily) FDV78_11600 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_11600 PF10431 C-terminal, D2-small domain, of ClpB protein FDV78_11600 PF17871 AAA lid domain FDV78_11605 PF00072 Response regulator receiver domain FDV78_11605 PF02954 Bacterial regulatory protein, Fis family FDV78_11605 PF00158 Sigma-54 interaction domain FDV78_11715 PF08525 Opacity-associated protein A N-terminal motif FDV78_11715 PF01551 Peptidase family M23 FDV78_11715 PF01476 LysM domain FDV78_11725 PF03741 Integral membrane protein TerC family FDV78_11735 PF04055 Radical SAM superfamily FDV78_11740 PF11230 Protein of unknown function (DUF3029) FDV78_11745 PF01810 LysE type translocator FDV78_11750 PF11871 Domain of unknown function (DUF3391) FDV78_11750 PF01966 HD domain FDV78_11755 PF03707 Bacterial signalling protein N terminal repeat FDV78_11755 PF00563 EAL domain FDV78_11755 PF00990 Diguanylate cyclase, GGDEF domain FDV78_11760 PF00158 Sigma-54 interaction domain FDV78_11760 PF02954 Bacterial regulatory protein, Fis family FDV78_11760 PF00072 Response regulator receiver domain FDV78_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_11765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_11765 PF00512 His Kinase A (phospho-acceptor) domain FDV78_11770 PF00939 Sodium:sulfate symporter transmembrane region FDV78_11785 PF00300 Histidine phosphatase superfamily (branch 1) FDV78_11800 PF03466 LysR substrate binding domain FDV78_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_11805 PF08543 Phosphomethylpyrimidine kinase FDV78_11820 PF13533 Biotin-lipoyl like FDV78_11865 PF14497 Glutathione S-transferase, C-terminal domain FDV78_11865 PF02798 Glutathione S-transferase, N-terminal domain FDV78_11875 PF04209 homogentisate 1,2-dioxygenase FDV78_11880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_11890 PF01546 Peptidase family M20/M25/M40 FDV78_11890 PF07687 Peptidase dimerisation domain FDV78_11895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_11900 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_11905 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_11905 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_11910 PF00005 ABC transporter FDV78_11910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_11915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_11915 PF00005 ABC transporter FDV78_11930 PF08453 Peptidase family M9 N-terminal FDV78_11930 PF01752 Collagenase FDV78_11945 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_11950 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_11955 PF00005 ABC transporter FDV78_11955 PF08402 TOBE domain FDV78_11960 PF00701 Dihydrodipicolinate synthetase family FDV78_11965 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDV78_11985 PF05544 Proline racemase FDV78_11990 PF00171 Aldehyde dehydrogenase family FDV78_11995 PF00392 Bacterial regulatory proteins, gntR family FDV78_12015 PF05971 RNA methyltransferase FDV78_12020 PF01863 Protein of unknown function DUF45 FDV78_12025 PF04991 LicD family FDV78_12030 PF16363 GDP-mannose 4,6 dehydratase FDV78_12035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDV78_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_12055 PF03466 LysR substrate binding domain FDV78_12075 PF00005 ABC transporter FDV78_12080 PF01032 FecCD transport family FDV78_12085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDV78_12105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDV78_12110 PF02654 Cobalamin-5-phosphate synthase FDV78_12115 PF02277 Phosphoribosyltransferase FDV78_12120 PF13460 NAD(P)H-binding FDV78_12130 PF00929 Exonuclease FDV78_12130 PF08411 Exonuclease C-terminal FDV78_12135 PF03788 LrgA family FDV78_12140 PF04172 LrgB-like family FDV78_12145 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FDV78_12145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV78_12150 PF02222 ATP-grasp domain FDV78_12155 PF05724 Thiopurine S-methyltransferase (TPMT) FDV78_12165 PF00216 Bacterial DNA-binding protein FDV78_12180 PF03483 B3/4 domain FDV78_12180 PF03484 tRNA synthetase B5 domain FDV78_12180 PF03147 Ferredoxin-fold anticodon binding domain FDV78_12180 PF01588 Putative tRNA binding domain FDV78_12180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FDV78_12185 PF01409 tRNA synthetases class II core domain (F) FDV78_12185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDV78_12190 PF00990 Diguanylate cyclase, GGDEF domain FDV78_12190 PF17158 Membrane-associated sensor, integral membrane domain FDV78_12220 PF01906 Putative heavy-metal-binding FDV78_12225 PF00453 Ribosomal protein L20 FDV78_12230 PF01632 Ribosomal protein L35 FDV78_12235 PF00707 Translation initiation factor IF-3, C-terminal domain FDV78_12235 PF05198 Translation initiation factor IF-3, N-terminal domain FDV78_12240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV78_12240 PF02824 TGS domain FDV78_12240 PF03129 Anticodon binding domain FDV78_12240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV78_12255 PF07702 UTRA domain FDV78_12255 PF00392 Bacterial regulatory proteins, gntR family FDV78_12260 PF01979 Amidohydrolase family FDV78_12265 PF00491 Arginase family FDV78_12270 PF01175 Urocanase Rossmann-like domain FDV78_12270 PF17392 Urocanase C-terminal domain FDV78_12270 PF17391 Urocanase N-terminal domain FDV78_12275 PF00221 Aromatic amino acid lyase FDV78_12285 PF04191 Phospholipid methyltransferase FDV78_12290 PF01565 FAD binding domain FDV78_12290 PF13183 4Fe-4S dicluster domain FDV78_12290 PF02913 FAD linked oxidases, C-terminal domain FDV78_12305 PF05736 OprF membrane domain FDV78_12305 PF00691 OmpA family FDV78_12325 PF01259 SAICAR synthetase FDV78_12330 PF09423 PhoD-like phosphatase FDV78_12330 PF16655 PhoD-like phosphatase, N-terminal domain FDV78_12340 PF02253 Phospholipase A1 FDV78_12345 PF00270 DEAD/DEAH box helicase FDV78_12345 PF08482 ATP-dependent helicase C-terminal FDV78_12345 PF00271 Helicase conserved C-terminal domain FDV78_12345 PF04408 Helicase associated domain (HA2) FDV78_12350 PF03949 Malic enzyme, NAD binding domain FDV78_12350 PF00390 Malic enzyme, N-terminal domain FDV78_12355 PF02698 DUF218 domain FDV78_12360 PF00939 Sodium:sulfate symporter transmembrane region FDV78_12365 PF00072 Response regulator receiver domain FDV78_12365 PF00990 Diguanylate cyclase, GGDEF domain FDV78_12375 PF00266 Aminotransferase class-V FDV78_12385 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_12390 PF00005 ABC transporter FDV78_12390 PF00664 ABC transporter transmembrane region FDV78_12395 PF00005 ABC transporter FDV78_12395 PF00664 ABC transporter transmembrane region FDV78_12400 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_12405 PF00266 Aminotransferase class-V FDV78_12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_12415 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_12415 PF00512 His Kinase A (phospho-acceptor) domain FDV78_12430 PF04994 TfoX C-terminal domain FDV78_12430 PF04993 TfoX N-terminal domain FDV78_12450 PF03956 Lysine exporter LysO FDV78_12460 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDV78_12465 PF01418 Helix-turn-helix domain, rpiR family FDV78_12465 PF01380 SIS domain FDV78_12470 PF00465 Iron-containing alcohol dehydrogenase FDV78_12480 PF00462 Glutaredoxin FDV78_12485 PF06826 Predicted Permease Membrane Region FDV78_12485 PF02080 TrkA-C domain FDV78_12490 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDV78_12490 PF07055 Enoyl reductase FAD binding domain FDV78_12490 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDV78_12495 PF09317 Domain of unknown function (DUF1974) FDV78_12495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_12495 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_12495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_12500 PF00440 Bacterial regulatory proteins, tetR family FDV78_12500 PF16295 Tetracyclin repressor-like, C-terminal domain FDV78_12505 PF06965 Na+/H+ antiporter 1 FDV78_12520 PF00005 ABC transporter FDV78_12525 PF01554 MatE FDV78_12530 PF13460 NAD(P)H-binding FDV78_12530 PF11066 Protein of unknown function (DUF2867) FDV78_12535 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV78_12550 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FDV78_12565 PF07690 Major Facilitator Superfamily FDV78_12570 PF01479 S4 domain FDV78_12570 PF00849 RNA pseudouridylate synthase FDV78_12575 PF04851 Type III restriction enzyme, res subunit FDV78_12575 PF00271 Helicase conserved C-terminal domain FDV78_12585 PF00072 Response regulator receiver domain FDV78_12585 PF00486 Transcriptional regulatory protein, C terminal FDV78_12590 PF00672 HAMP domain FDV78_12590 PF00512 His Kinase A (phospho-acceptor) domain FDV78_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_12595 PF01386 Ribosomal L25p family FDV78_12610 PF00149 Calcineurin-like phosphoesterase FDV78_12610 PF02872 5'-nucleotidase, C-terminal domain FDV78_12625 PF06945 Protein of unknown function (DUF1289) FDV78_12635 PF00196 Bacterial regulatory proteins, luxR family FDV78_12635 PF00072 Response regulator receiver domain FDV78_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_12650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV78_12660 PF09335 SNARE associated Golgi protein FDV78_12665 PF13416 Bacterial extracellular solute-binding protein FDV78_12670 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_12675 PF00005 ABC transporter FDV78_12680 PF01066 CDP-alcohol phosphatidyltransferase FDV78_12695 PF01590 GAF domain FDV78_12695 PF00158 Sigma-54 interaction domain FDV78_12700 PF03063 Prismane/CO dehydrogenase family FDV78_12705 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_12705 PF00175 Oxidoreductase NAD-binding domain FDV78_12705 PF00970 Oxidoreductase FAD-binding domain FDV78_12715 PF00849 RNA pseudouridylate synthase FDV78_12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_12720 PF12729 Four helix bundle sensory module for signal transduction FDV78_12720 PF00672 HAMP domain FDV78_12725 PF00209 Sodium:neurotransmitter symporter family FDV78_12730 PF13396 Phospholipase_D-nuclease N-terminal FDV78_12730 PF13091 PLD-like domain FDV78_12735 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV78_12740 PF00561 alpha/beta hydrolase fold FDV78_12745 PF03280 Proteobacterial lipase chaperone protein FDV78_12750 PF03352 Methyladenine glycosylase FDV78_12755 PF00873 AcrB/AcrD/AcrF family FDV78_12760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_12765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_12770 PF04024 PspC domain FDV78_12775 PF06667 Phage shock protein B FDV78_12780 PF04012 PspA/IM30 family FDV78_12785 PF00158 Sigma-54 interaction domain FDV78_12785 PF02954 Bacterial regulatory protein, Fis family FDV78_12790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_12795 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_12800 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_12800 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_12805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_12805 PF00005 ABC transporter FDV78_12810 PF00005 ABC transporter FDV78_12820 PF02833 DHHA2 domain FDV78_12820 PF01368 DHH family FDV78_12830 PF16875 Glycosyl hydrolase family 36 N-terminal domain FDV78_12830 PF16874 Glycosyl hydrolase family 36 C-terminal domain FDV78_12835 PF01568 Molydopterin dinucleotide binding domain FDV78_12835 PF00384 Molybdopterin oxidoreductase FDV78_12835 PF18364 Molybdopterin oxidoreductase N-terminal domain FDV78_12840 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV78_12845 PF06796 Periplasmic nitrate reductase protein NapE FDV78_12850 PF03649 Uncharacterised protein family (UPF0014) FDV78_12860 PF01226 Formate/nitrite transporter FDV78_12885 PF02698 DUF218 domain FDV78_12890 PF00265 Thymidine kinase FDV78_12895 PF01406 tRNA synthetases class I (C) catalytic domain FDV78_12895 PF09190 DALR domain FDV78_12900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV78_12905 PF00149 Calcineurin-like phosphoesterase FDV78_12910 PF00563 EAL domain FDV78_12910 PF08668 HDOD domain FDV78_12920 PF02810 SEC-C motif FDV78_12925 PF01502 Phosphoribosyl-AMP cyclohydrolase FDV78_12925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FDV78_12930 PF00977 Histidine biosynthesis protein FDV78_12935 PF00977 Histidine biosynthesis protein FDV78_12940 PF00117 Glutamine amidotransferase class-I FDV78_12945 PF08645 Polynucleotide kinase 3 phosphatase FDV78_12945 PF00475 Imidazoleglycerol-phosphate dehydratase FDV78_12950 PF00155 Aminotransferase class I and II FDV78_12955 PF00815 Histidinol dehydrogenase FDV78_12960 PF01634 ATP phosphoribosyltransferase FDV78_12960 PF08029 HisG, C-terminal domain FDV78_12965 PF02954 Bacterial regulatory protein, Fis family FDV78_12965 PF00072 Response regulator receiver domain FDV78_12965 PF00158 Sigma-54 interaction domain FDV78_12975 PF03553 Na+/H+ antiporter family FDV78_12980 PF00816 H-NS histone family FDV78_12985 PF00294 pfkB family carbohydrate kinase FDV78_13000 PF04356 Protein of unknown function (DUF489) FDV78_13005 PF00206 Lyase FDV78_13005 PF08328 Adenylosuccinate lyase C-terminal FDV78_13045 PF00106 short chain dehydrogenase FDV78_13055 PF01435 Peptidase family M48 FDV78_13070 PF08241 Methyltransferase domain FDV78_13075 PF00155 Aminotransferase class I and II FDV78_13080 PF06968 Biotin and Thiamin Synthesis associated domain FDV78_13080 PF04055 Radical SAM superfamily FDV78_13085 PF00202 Aminotransferase class-III FDV78_13090 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDV78_13105 PF02403 Seryl-tRNA synthetase N-terminal domain FDV78_13105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV78_13110 PF16193 AAA C-terminal domain FDV78_13110 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_13110 PF12002 MgsA AAA+ ATPase C terminal FDV78_13115 PF03548 Outer membrane lipoprotein carrier protein LolA FDV78_13120 PF09397 Ftsk gamma domain FDV78_13120 PF17854 FtsK alpha domain FDV78_13120 PF01580 FtsK/SpoIIIE family FDV78_13120 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDV78_13125 PF01037 Lrp/AsnC ligand binding domain FDV78_13130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDV78_13130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDV78_13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_13140 PF03466 LysR substrate binding domain FDV78_13150 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDV78_13155 PF03372 Endonuclease/Exonuclease/phosphatase family FDV78_13165 PF00579 tRNA synthetases class I (W and Y) FDV78_13185 PF00873 AcrB/AcrD/AcrF family FDV78_13190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_13190 PF00529 HlyD membrane-fusion protein of T1SS FDV78_13205 PF12729 Four helix bundle sensory module for signal transduction FDV78_13205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_13205 PF00672 HAMP domain FDV78_13240 PF06610 L-alanine exporter FDV78_13245 PF00072 Response regulator receiver domain FDV78_13245 PF09308 LuxQ, periplasmic FDV78_13245 PF00512 His Kinase A (phospho-acceptor) domain FDV78_13245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_13255 PF03738 Glutathionylspermidine synthase preATP-grasp FDV78_13265 PF03994 Domain of Unknown Function (DUF350) FDV78_13275 PF02445 Quinolinate synthetase A protein FDV78_13280 PF16331 TolA binding protein trimerisation FDV78_13280 PF13174 Tetratricopeptide repeat FDV78_13285 PF00691 OmpA family FDV78_13290 PF04052 TolB amino-terminal domain FDV78_13290 PF07676 WD40-like Beta Propeller Repeat FDV78_13300 PF02472 Biopolymer transport protein ExbD/TolR FDV78_13305 PF01618 MotA/TolQ/ExbB proton channel family FDV78_13310 PF03061 Thioesterase superfamily FDV78_13320 PF08173 Membrane bound YbgT-like protein FDV78_13325 PF02322 Cytochrome bd terminal oxidase subunit II FDV78_13330 PF01654 Cytochrome bd terminal oxidase subunit I FDV78_13335 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDV78_13335 PF05491 RuvB C-terminal winged helix domain FDV78_13335 PF17864 RuvB AAA lid domain FDV78_13340 PF07499 RuvA, C-terminal domain FDV78_13340 PF01330 RuvA N terminal domain FDV78_13345 PF00672 HAMP domain FDV78_13345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_13345 PF02203 Tar ligand binding domain homologue FDV78_13350 PF02075 Crossover junction endodeoxyribonuclease RuvC FDV78_13355 PF00152 tRNA synthetases class II (D, K and N) FDV78_13355 PF01336 OB-fold nucleic acid binding domain FDV78_13355 PF02938 GAD domain FDV78_13360 PF01904 Protein of unknown function DUF72 FDV78_13365 PF13649 Methyltransferase domain FDV78_13370 PF08003 Protein of unknown function (DUF1698) FDV78_13380 PF08443 RimK-like ATP-grasp domain FDV78_13380 PF18030 RimK PreATP-grasp domain FDV78_13390 PF18030 RimK PreATP-grasp domain FDV78_13390 PF08443 RimK-like ATP-grasp domain FDV78_13400 PF04310 MukB N-terminal FDV78_13400 PF16330 MukB hinge domain FDV78_13405 PF04288 MukE-like family FDV78_13410 PF17193 MukF C-terminal domain FDV78_13410 PF17192 MukF middle domain FDV78_13410 PF03882 MukF winged-helix domain FDV78_13415 PF13847 Methyltransferase domain FDV78_13420 PF02698 DUF218 domain FDV78_13425 PF00072 Response regulator receiver domain FDV78_13425 PF00486 Transcriptional regulatory protein, C terminal FDV78_13430 PF02613 Nitrate reductase delta subunit FDV78_13435 PF00356 Bacterial regulatory proteins, lacI family FDV78_13440 PF04994 TfoX C-terminal domain FDV78_13440 PF04993 TfoX N-terminal domain FDV78_13460 PF08323 Starch synthase catalytic domain FDV78_13460 PF00534 Glycosyl transferases group 1 FDV78_13465 PF00483 Nucleotidyl transferase FDV78_13470 PF08272 Topoisomerase I zinc-ribbon-like FDV78_13470 PF01131 DNA topoisomerase FDV78_13470 PF01751 Toprim domain FDV78_13470 PF01396 Topoisomerase DNA binding C4 zinc finger FDV78_13475 PF10692 Protein of unknown function (DUF2498) FDV78_13480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDV78_13490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDV78_13495 PF04377 Arginine-tRNA-protein transferase, C terminus FDV78_13495 PF04376 Arginine-tRNA-protein transferase, N terminus FDV78_13500 PF01176 Translation initiation factor 1A / IF-1 FDV78_13510 PF07724 AAA domain (Cdc48 subfamily) FDV78_13510 PF02861 Clp amino terminal domain, pathogenicity island component FDV78_13510 PF17871 AAA lid domain FDV78_13510 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_13510 PF10431 C-terminal, D2-small domain, of ClpB protein FDV78_13515 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDV78_13520 PF00313 'Cold-shock' DNA-binding domain FDV78_13525 PF03971 Monomeric isocitrate dehydrogenase FDV78_13530 PF00849 RNA pseudouridylate synthase FDV78_13535 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV78_13545 PF13307 Helicase C-terminal domain FDV78_13545 PF06733 DEAD_2 FDV78_13550 PF01925 Sulfite exporter TauE/SafE FDV78_13555 PF07445 Primosomal replication protein priC FDV78_13560 PF10689 Protein of unknown function (DUF2496) FDV78_13565 PF03372 Endonuclease/Exonuclease/phosphatase family FDV78_13575 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_13580 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_13585 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_13590 PF00005 ABC transporter FDV78_13610 PF01228 Glycine radical FDV78_13610 PF02901 Pyruvate formate lyase-like FDV78_13620 PF04055 Radical SAM superfamily FDV78_13630 PF03887 YfbU domain FDV78_13640 PF06798 PrkA serine protein kinase C-terminal domain FDV78_13640 PF08298 PrkA AAA domain FDV78_13645 PF04285 Protein of unknown function (DUF444) FDV78_13650 PF04293 SpoVR like protein FDV78_13655 PF02348 Cytidylyltransferase FDV78_13660 PF03966 Trm112p-like protein FDV78_13665 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDV78_13670 PF00664 ABC transporter transmembrane region FDV78_13670 PF00005 ABC transporter FDV78_13675 PF03772 Competence protein FDV78_13675 PF13567 Domain of unknown function (DUF4131) FDV78_13675 PF00753 Metallo-beta-lactamase superfamily FDV78_13685 PF02687 FtsX-like permease family FDV78_13685 PF12704 MacB-like periplasmic core domain FDV78_13690 PF00005 ABC transporter FDV78_13695 PF02687 FtsX-like permease family FDV78_13695 PF12704 MacB-like periplasmic core domain FDV78_13705 PF00271 Helicase conserved C-terminal domain FDV78_13705 PF00270 DEAD/DEAH box helicase FDV78_13705 PF03461 TRCF domain FDV78_13705 PF02559 CarD-like/TRCF domain FDV78_13705 PF17757 UvrB interaction domain FDV78_13720 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_13730 PF05728 Uncharacterised protein family (UPF0227) FDV78_13740 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDV78_13740 PF13036 Peptidoglycan-synthase activator LpoB FDV78_13755 PF01230 HIT domain FDV78_13760 PF00672 HAMP domain FDV78_13760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_13775 PF01048 Phosphorylase superfamily FDV78_13780 PF00403 Heavy-metal-associated domain FDV78_13785 PF00571 CBS domain FDV78_13785 PF00478 IMP dehydrogenase / GMP reductase domain FDV78_13800 PF11953 Domain of unknown function (DUF3470) FDV78_13800 PF00037 4Fe-4S binding domain FDV78_13805 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDV78_13805 PF00588 SpoU rRNA Methylase family FDV78_13815 PF17152 Periplasmic sensor domain FDV78_13815 PF00990 Diguanylate cyclase, GGDEF domain FDV78_13825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDV78_13830 PF09619 Type III secretion system lipoprotein chaperone (YscW) FDV78_13845 PF01037 Lrp/AsnC ligand binding domain FDV78_13845 PF13404 AsnC-type helix-turn-helix domain FDV78_13850 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_13875 PF00873 AcrB/AcrD/AcrF family FDV78_13880 PF13533 Biotin-lipoyl like FDV78_13925 PF07690 Major Facilitator Superfamily FDV78_13930 PF03601 Conserved hypothetical protein 698 FDV78_13940 PF00501 AMP-binding enzyme FDV78_13940 PF13193 AMP-binding enzyme C-terminal domain FDV78_13945 PF13378 Enolase C-terminal domain-like FDV78_13950 PF00378 Enoyl-CoA hydratase/isomerase FDV78_13955 PF12697 Alpha/beta hydrolase family FDV78_13960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV78_13960 PF16582 Middle domain of thiamine pyrophosphate FDV78_13960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV78_13965 PF00425 chorismate binding enzyme FDV78_13970 PF00155 Aminotransferase class I and II FDV78_13980 PF01966 HD domain FDV78_13980 PF13286 Phosphohydrolase-associated domain FDV78_14000 PF13145 PPIC-type PPIASE domain FDV78_14005 PF00216 Bacterial DNA-binding protein FDV78_14010 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV78_14010 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDV78_14010 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_14015 PF07724 AAA domain (Cdc48 subfamily) FDV78_14015 PF10431 C-terminal, D2-small domain, of ClpB protein FDV78_14015 PF06689 ClpX C4-type zinc finger FDV78_14020 PF00574 Clp protease FDV78_14025 PF05697 Bacterial trigger factor protein (TF) FDV78_14025 PF05698 Bacterial trigger factor protein (TF) C-terminus FDV78_14025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_14030 PF00512 His Kinase A (phospho-acceptor) domain FDV78_14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_14030 PF02743 Cache domain FDV78_14035 PF00072 Response regulator receiver domain FDV78_14035 PF02954 Bacterial regulatory protein, Fis family FDV78_14035 PF00158 Sigma-54 interaction domain FDV78_14045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDV78_14050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FDV78_14055 PF03480 Bacterial extracellular solute-binding protein, family 7 FDV78_14060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDV78_14080 PF02386 Cation transport protein FDV78_14085 PF02254 TrkA-N domain FDV78_14085 PF02080 TrkA-C domain FDV78_14090 PF00270 DEAD/DEAH box helicase FDV78_14090 PF00271 Helicase conserved C-terminal domain FDV78_14095 PF03471 Transporter associated domain FDV78_14095 PF00571 CBS domain FDV78_14095 PF01595 Cyclin M transmembrane N-terminal domain FDV78_14105 PF04820 Tryptophan halogenase FDV78_14130 PF00550 Phosphopantetheine attachment site FDV78_14135 PF00550 Phosphopantetheine attachment site FDV78_14150 PF07977 FabA-like domain FDV78_14155 PF00535 Glycosyl transferase family 2 FDV78_14160 PF00221 Aromatic amino acid lyase FDV78_14185 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV78_14185 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV78_14190 PF07977 FabA-like domain FDV78_14200 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV78_14200 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV78_14215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDV78_14215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDV78_14220 PF07670 Nucleoside recognition FDV78_14220 PF01773 Na+ dependent nucleoside transporter N-terminus FDV78_14220 PF07662 Na+ dependent nucleoside transporter C-terminus FDV78_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_14225 PF03466 LysR substrate binding domain FDV78_14230 PF13406 Transglycosylase SLT domain FDV78_14235 PF05166 YcgL domain FDV78_14240 PF03775 Septum formation inhibitor MinC, C-terminal domain FDV78_14240 PF05209 Septum formation inhibitor MinC, N-terminal domain FDV78_14245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDV78_14250 PF03776 Septum formation topological specificity factor MinE FDV78_14255 PF00570 HRDC domain FDV78_14255 PF01612 3'-5' exonuclease FDV78_14260 PF13193 AMP-binding enzyme C-terminal domain FDV78_14260 PF00501 AMP-binding enzyme FDV78_14265 PF00561 alpha/beta hydrolase fold FDV78_14280 PF00814 Glycoprotease family FDV78_14285 PF04851 Type III restriction enzyme, res subunit FDV78_14285 PF13307 Helicase C-terminal domain FDV78_14290 PF00551 Formyl transferase FDV78_14290 PF01842 ACT domain FDV78_14295 PF06185 YecM protein FDV78_14305 PF03485 Arginyl tRNA synthetase N terminal domain FDV78_14305 PF05746 DALR anticodon binding domain FDV78_14305 PF00750 tRNA synthetases class I (R) FDV78_14320 PF07664 Ferrous iron transport protein B C terminus FDV78_14320 PF17910 FeoB cytosolic helical domain FDV78_14320 PF02421 Ferrous iron transport protein B FDV78_14320 PF07670 Nucleoside recognition FDV78_14325 PF04023 FeoA domain FDV78_14340 PF12833 Helix-turn-helix domain FDV78_14340 PF02311 AraC-like ligand binding domain FDV78_14345 PF01297 Zinc-uptake complex component A periplasmic FDV78_14350 PF00005 ABC transporter FDV78_14355 PF00950 ABC 3 transport family FDV78_14360 PF00549 CoA-ligase FDV78_14360 PF02629 CoA binding domain FDV78_14365 PF00549 CoA-ligase FDV78_14365 PF08442 ATP-grasp domain FDV78_14370 PF02817 e3 binding domain FDV78_14370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV78_14370 PF00364 Biotin-requiring enzyme FDV78_14375 PF16870 2-oxoglutarate dehydrogenase C-terminal FDV78_14375 PF02779 Transketolase, pyrimidine binding domain FDV78_14375 PF16078 2-oxoglutarate dehydrogenase N-terminus FDV78_14375 PF00676 Dehydrogenase E1 component FDV78_14380 PF13085 2Fe-2S iron-sulfur cluster binding domain FDV78_14385 PF02910 Fumarate reductase flavoprotein C-term FDV78_14385 PF00890 FAD binding domain FDV78_14390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDV78_14395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDV78_14400 PF00285 Citrate synthase, C-terminal domain FDV78_14405 PF01784 NIF3 (NGG1p interacting factor 3) FDV78_14415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV78_14415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV78_14415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV78_14415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV78_14420 PF03925 SeqA protein C-terminal domain FDV78_14420 PF17206 SeqA protein N-terminal domain FDV78_14425 PF12697 Alpha/beta hydrolase family FDV78_14435 PF00258 Flavodoxin FDV78_14445 PF01475 Ferric uptake regulator family FDV78_14450 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV78_14450 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDV78_14455 PF00367 phosphotransferase system, EIIB FDV78_14455 PF02378 Phosphotransferase system, EIIC FDV78_14465 PF01979 Amidohydrolase family FDV78_14470 PF00480 ROK family FDV78_14470 PF01047 MarR family FDV78_14475 PF02254 TrkA-N domain FDV78_14475 PF00999 Sodium/hydrogen exchanger family FDV78_14480 PF13537 Glutamine amidotransferase domain FDV78_14480 PF00733 Asparagine synthase FDV78_14485 PF02357 Transcription termination factor nusG FDV78_14490 PF00854 POT family FDV78_14495 PF00762 Ferrochelatase FDV78_14500 PF05191 Adenylate kinase, active site lid FDV78_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_14505 PF00183 Hsp90 protein FDV78_14510 PF00486 Transcriptional regulatory protein, C terminal FDV78_14515 PF17323 Trans-membrane regulatory protein ToxS FDV78_14530 PF12850 Calcineurin-like phosphoesterase superfamily domain FDV78_14550 PF07556 Protein of unknown function (DUF1538) FDV78_14555 PF07556 Protein of unknown function (DUF1538) FDV78_14560 PF01370 NAD dependent epimerase/dehydratase family FDV78_14560 PF08338 Domain of unknown function (DUF1731) FDV78_14565 PF00106 short chain dehydrogenase FDV78_14575 PF00085 Thioredoxin FDV78_14580 PF16200 C-terminal region of band_7 FDV78_14580 PF01145 SPFH domain / Band 7 family FDV78_14595 PF03573 outer membrane porin, OprD family FDV78_14605 PF12826 Helix-hairpin-helix motif FDV78_14605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDV78_14605 PF00533 BRCA1 C Terminus (BRCT) domain FDV78_14605 PF03120 NAD-dependent DNA ligase OB-fold domain FDV78_14605 PF01653 NAD-dependent DNA ligase adenylation domain FDV78_14610 PF04354 ZipA, C-terminal FtsZ-binding domain FDV78_14620 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_14630 PF00381 PTS HPr component phosphorylation site FDV78_14635 PF00391 PEP-utilising enzyme, mobile domain FDV78_14635 PF02896 PEP-utilising enzyme, TIM barrel domain FDV78_14635 PF05524 PEP-utilising enzyme, N-terminal FDV78_14640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FDV78_14650 PF07196 Flagellin hook IN motif FDV78_14650 PF00669 Bacterial flagellin N-terminal helical region FDV78_14650 PF00700 Bacterial flagellin C-terminal helical region FDV78_14655 PF00669 Bacterial flagellin N-terminal helical region FDV78_14655 PF07196 Flagellin hook IN motif FDV78_14655 PF00700 Bacterial flagellin C-terminal helical region FDV78_14665 PF00669 Bacterial flagellin N-terminal helical region FDV78_14665 PF07196 Flagellin hook IN motif FDV78_14665 PF00700 Bacterial flagellin C-terminal helical region FDV78_14675 PF00669 Bacterial flagellin N-terminal helical region FDV78_14680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_14680 PF07196 Flagellin hook IN motif FDV78_14685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDV78_14685 PF10135 Rod binding protein FDV78_14690 PF02119 Flagellar P-ring protein FDV78_14695 PF02107 Flagellar L-ring protein FDV78_14700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_14700 PF00460 Flagella basal body rod protein FDV78_14705 PF00460 Flagella basal body rod protein FDV78_14705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_14715 PF07559 Flagellar basal body protein FlaE FDV78_14715 PF00460 Flagella basal body rod protein FDV78_14715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_14720 PF13860 FlgD Ig-like domain FDV78_14720 PF13861 FlgD Tudor-like domain FDV78_14720 PF03963 Flagellar hook capping protein - N-terminal region FDV78_14725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_14725 PF00460 Flagella basal body rod protein FDV78_14730 PF00460 Flagella basal body rod protein FDV78_14735 PF01739 CheR methyltransferase, SAM binding domain FDV78_14735 PF03705 CheR methyltransferase, all-alpha domain FDV78_14740 PF01584 CheW-like domain FDV78_14740 PF00072 Response regulator receiver domain FDV78_14795 PF00691 OmpA family FDV78_14795 PF01389 OmpA-like transmembrane domain FDV78_14805 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV78_14810 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV78_14815 PF13609 Gram-negative porin FDV78_14825 PF00403 Heavy-metal-associated domain FDV78_14840 PF03173 Putative carbohydrate binding domain FDV78_14840 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FDV78_14840 PF02838 Glycosyl hydrolase family 20, domain 2 FDV78_14840 PF00728 Glycosyl hydrolase family 20, catalytic domain FDV78_14865 PF01713 Smr domain FDV78_14870 PF00849 RNA pseudouridylate synthase FDV78_14870 PF01479 S4 domain FDV78_14875 PF04073 Aminoacyl-tRNA editing domain FDV78_14880 PF02872 5'-nucleotidase, C-terminal domain FDV78_14880 PF00149 Calcineurin-like phosphoesterase FDV78_14885 PF00793 DAHP synthetase I family FDV78_14890 PF13369 Transglutaminase-like superfamily FDV78_14895 PF04247 Invasion gene expression up-regulator, SirB FDV78_14900 PF17827 PrmC N-terminal domain FDV78_14900 PF13847 Methyltransferase domain FDV78_14905 PF00472 RF-1 domain FDV78_14905 PF03462 PCRF domain FDV78_14910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDV78_14910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDV78_14910 PF01488 Shikimate / quinate 5-dehydrogenase FDV78_14915 PF03550 Outer membrane lipoprotein LolB FDV78_14920 PF08544 GHMP kinases C terminal FDV78_14920 PF00288 GHMP kinases N terminal domain FDV78_14925 PF14572 Phosphoribosyl synthetase-associated domain FDV78_14925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDV78_14930 PF01195 Peptidyl-tRNA hydrolase FDV78_14935 PF06071 Protein of unknown function (DUF933) FDV78_14935 PF01926 50S ribosome-binding GTPase FDV78_15050 PF01494 FAD binding domain FDV78_15060 PF01938 TRAM domain FDV78_15060 PF00919 Uncharacterized protein family UPF0004 FDV78_15060 PF04055 Radical SAM superfamily FDV78_15065 PF02562 PhoH-like protein FDV78_15070 PF02130 Uncharacterized protein family UPF0054 FDV78_15075 PF00571 CBS domain FDV78_15075 PF03471 Transporter associated domain FDV78_15080 PF00795 Carbon-nitrogen hydrolase FDV78_15085 PF07295 Zinc-ribbon containing domain FDV78_15090 PF08264 Anticodon-binding domain of tRNA FDV78_15090 PF00133 tRNA synthetases class I (I, L, M and V) FDV78_15090 PF13603 Leucyl-tRNA synthetase, Domain 2 FDV78_15095 PF04390 Lipopolysaccharide-assembly FDV78_15100 PF06144 DNA polymerase III, delta subunit FDV78_15100 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FDV78_15110 PF02590 Predicted SPOUT methyltransferase FDV78_15115 PF00905 Penicillin binding protein transpeptidase domain FDV78_15115 PF03717 Penicillin-binding Protein dimerisation domain FDV78_15120 PF01098 Cell cycle protein FDV78_15125 PF03330 Lytic transglycolase FDV78_15125 PF05036 Sporulation related domain FDV78_15130 PF07943 Penicillin-binding protein 5, C-terminal domain FDV78_15130 PF00768 D-alanyl-D-alanine carboxypeptidase FDV78_15135 PF04359 Protein of unknown function (DUF493) FDV78_15140 PF03099 Biotin/lipoate A/B protein ligase family FDV78_15145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FDV78_15145 PF04055 Radical SAM superfamily FDV78_15150 PF00464 Serine hydroxymethyltransferase FDV78_15170 PF16657 Maltogenic Amylase, C-terminal domain FDV78_15170 PF00128 Alpha amylase, catalytic domain FDV78_15175 PF02378 Phosphotransferase system, EIIC FDV78_15175 PF00367 phosphotransferase system, EIIB FDV78_15180 PF00356 Bacterial regulatory proteins, lacI family FDV78_15195 PF00005 ABC transporter FDV78_15195 PF09383 NIL domain FDV78_15200 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_15205 PF03180 NLPA lipoprotein FDV78_15210 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FDV78_15215 PF07348 Syd protein (SUKH-2) FDV78_15220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDV78_15220 PF14489 QueF-like protein FDV78_15230 PF00072 Response regulator receiver domain FDV78_15230 PF00990 Diguanylate cyclase, GGDEF domain FDV78_15235 PF11892 Domain of unknown function (DUF3412) FDV78_15235 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FDV78_15235 PF03641 Possible lysine decarboxylase FDV78_15240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDV78_15240 PF01367 5'-3' exonuclease, C-terminal SAM fold FDV78_15245 PF01223 DNA/RNA non-specific endonuclease FDV78_15250 PF18125 RlmM ferredoxin-like domain FDV78_15250 PF01728 FtsJ-like methyltransferase FDV78_15255 PF04241 Protein of unknown function (DUF423) FDV78_15265 PF03466 LysR substrate binding domain FDV78_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_15270 PF02926 THUMP domain FDV78_15270 PF02568 Thiamine biosynthesis protein (ThiI) FDV78_15275 PF00691 OmpA family FDV78_15280 PF01618 MotA/TolQ/ExbB proton channel family FDV78_15285 PF02609 Exonuclease VII small subunit FDV78_15290 PF00348 Polyprenyl synthetase FDV78_15295 PF02779 Transketolase, pyrimidine binding domain FDV78_15295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDV78_15295 PF02780 Transketolase, C-terminal domain FDV78_15300 PF04608 Phosphatidylglycerophosphatase A FDV78_15305 PF02769 AIR synthase related protein, C-terminal domain FDV78_15305 PF00586 AIR synthase related protein, N-terminal domain FDV78_15310 PF01029 NusB family FDV78_15315 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDV78_15320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDV78_15320 PF00925 GTP cyclohydrolase II FDV78_15325 PF00677 Lumazine binding domain FDV78_15330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV78_15330 PF01872 RibD C-terminal domain FDV78_15335 PF03477 ATP cone domain FDV78_15340 PF00171 Aldehyde dehydrogenase family FDV78_15345 PF00696 Amino acid kinase family FDV78_15345 PF01472 PUA domain FDV78_15350 PF07417 Sigma factor-binding transcriptional regulator Crl FDV78_15360 PF00156 Phosphoribosyl transferase domain FDV78_15365 PF00860 Permease family FDV78_15370 PF01546 Peptidase family M20/M25/M40 FDV78_15370 PF07687 Peptidase dimerisation domain FDV78_15395 PF02769 AIR synthase related protein, C-terminal domain FDV78_15395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDV78_15395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDV78_15400 PF01464 Transglycosylase SLT domain FDV78_15400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_15410 PF14437 MafB19-like deaminase FDV78_15415 PF03806 AbgT putative transporter family FDV78_15440 PF07963 Prokaryotic N-terminal methylation motif FDV78_15440 PF00114 Pilin (bacterial filament) FDV78_15445 PF07963 Prokaryotic N-terminal methylation motif FDV78_15445 PF00114 Pilin (bacterial filament) FDV78_15450 PF00226 DnaJ domain FDV78_15450 PF00684 DnaJ central domain FDV78_15450 PF01556 DnaJ C terminal domain FDV78_15455 PF00012 Hsp70 protein FDV78_15460 PF00375 Sodium:dicarboxylate symporter family FDV78_15465 PF01025 GrpE FDV78_15470 PF01513 ATP-NAD kinase FDV78_15480 PF02463 RecF/RecN/SMC N terminal domain FDV78_15485 PF04355 SmpA / OmlA family FDV78_15490 PF03658 RnfH family Ubiquitin FDV78_15495 PF03364 Polyketide cyclase / dehydrase and lipid transport FDV78_15500 PF01668 SmpB protein FDV78_15510 PF00589 Phage integrase family FDV78_15510 PF13356 Arm DNA-binding domain FDV78_15525 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FDV78_15525 PF00271 Helicase conserved C-terminal domain FDV78_15525 PF08463 EcoEI R protein C-terminal FDV78_15525 PF04851 Type III restriction enzyme, res subunit FDV78_15530 PF01555 DNA methylase FDV78_15560 PF02384 N-6 DNA Methylase FDV78_15560 PF12161 HsdM N-terminal domain FDV78_15565 PF01420 Type I restriction modification DNA specificity domain FDV78_15580 PF00239 Resolvase, N terminal domain FDV78_15580 PF02796 Helix-turn-helix domain of resolvase FDV78_15625 PF12833 Helix-turn-helix domain FDV78_15630 PF00563 EAL domain FDV78_15630 PF00990 Diguanylate cyclase, GGDEF domain FDV78_15630 PF03707 Bacterial signalling protein N terminal repeat FDV78_15630 PF13188 PAS domain FDV78_15670 PF01381 Helix-turn-helix FDV78_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_15685 PF03466 LysR substrate binding domain FDV78_15690 PF00795 Carbon-nitrogen hydrolase FDV78_15690 PF00583 Acetyltransferase (GNAT) family FDV78_15710 PF00202 Aminotransferase class-III FDV78_15715 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV78_15725 PF07969 Amidohydrolase family FDV78_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_15745 PF03466 LysR substrate binding domain FDV78_15750 PF01266 FAD dependent oxidoreductase FDV78_15755 PF01235 Sodium:alanine symporter family FDV78_15765 PF01184 GPR1/FUN34/yaaH family FDV78_15770 PF00704 Glycosyl hydrolases family 18 FDV78_15770 PF06483 Chitinase C FDV78_15775 PF03553 Na+/H+ antiporter family FDV78_15780 PF00117 Glutamine amidotransferase class-I FDV78_15780 PF00958 GMP synthase C terminal domain FDV78_15780 PF02540 NAD synthase FDV78_15785 PF00478 IMP dehydrogenase / GMP reductase domain FDV78_15785 PF00571 CBS domain FDV78_15790 PF02601 Exonuclease VII, large subunit FDV78_15790 PF13742 OB-fold nucleic acid binding domain FDV78_15805 PF01926 50S ribosome-binding GTPase FDV78_15805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDV78_15810 PF13360 PQQ-like domain FDV78_15815 PF09976 Tetratricopeptide repeat-like domain FDV78_15820 PF03129 Anticodon binding domain FDV78_15820 PF13393 Histidyl-tRNA synthetase FDV78_15825 PF04551 GcpE protein FDV78_15830 PF13464 Domain of unknown function (DUF4115) FDV78_15840 PF04055 Radical SAM superfamily FDV78_15845 PF00334 Nucleoside diphosphate kinase FDV78_15850 PF12404 Peptidase FDV78_15850 PF00883 Cytosol aminopeptidase family, catalytic domain FDV78_15855 PF04384 Iron-sulphur cluster assembly FDV78_15860 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_15865 PF00012 Hsp70 protein FDV78_15870 PF07743 HSCB C-terminal oligomerisation domain FDV78_15870 PF00226 DnaJ domain FDV78_15875 PF01521 Iron-sulphur cluster biosynthesis FDV78_15880 PF01592 NifU-like N terminal domain FDV78_15885 PF00266 Aminotransferase class-V FDV78_15890 PF02082 Transcriptional regulator FDV78_15895 PF00588 SpoU rRNA Methylase family FDV78_15900 PF00459 Inositol monophosphatase family FDV78_15910 PF07549 SecD/SecF GG Motif FDV78_15910 PF02355 Protein export membrane protein FDV78_15915 PF07549 SecD/SecF GG Motif FDV78_15915 PF02355 Protein export membrane protein FDV78_15915 PF13721 SecD export protein N-terminal TM region FDV78_15920 PF02699 Preprotein translocase subunit FDV78_15925 PF01702 Queuine tRNA-ribosyltransferase FDV78_15930 PF02547 Queuosine biosynthesis protein FDV78_15945 PF00571 CBS domain FDV78_15950 PF00463 Isocitrate lyase family FDV78_15955 PF01274 Malate synthase FDV78_15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_15965 PF03466 LysR substrate binding domain FDV78_15970 PF00578 AhpC/TSA family FDV78_15970 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDV78_15980 PF03932 CutC family FDV78_15985 PF03976 Polyphosphate kinase 2 (PPK2) FDV78_15990 PF01895 PhoU domain FDV78_15995 PF00005 ABC transporter FDV78_16000 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_16005 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_16010 PF13090 Polyphosphate kinase C-terminal domain 2 FDV78_16010 PF02503 Polyphosphate kinase middle domain FDV78_16010 PF13089 Polyphosphate kinase N-terminal domain FDV78_16010 PF17941 Polyphosphate kinase C-terminal domain 1 FDV78_16015 PF02541 Ppx/GppA phosphatase family FDV78_16020 PF12849 PBP superfamily domain FDV78_16025 PF11808 Phosphate regulon sensor protein PhoR FDV78_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_16025 PF00989 PAS fold FDV78_16025 PF00512 His Kinase A (phospho-acceptor) domain FDV78_16030 PF00486 Transcriptional regulatory protein, C terminal FDV78_16030 PF00072 Response regulator receiver domain FDV78_16040 PF04381 Putative exonuclease, RdgC FDV78_16050 PF00037 4Fe-4S binding domain FDV78_16065 PF03411 Penicillin-insensitive murein endopeptidase FDV78_16115 PF10431 C-terminal, D2-small domain, of ClpB protein FDV78_16115 PF02861 Clp amino terminal domain, pathogenicity island component FDV78_16115 PF17871 AAA lid domain FDV78_16115 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_16115 PF07724 AAA domain (Cdc48 subfamily) FDV78_16125 PF01479 S4 domain FDV78_16125 PF00849 RNA pseudouridylate synthase FDV78_16130 PF13525 Outer membrane lipoprotein FDV78_16135 PF01464 Transglycosylase SLT domain FDV78_16140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDV78_16145 PF01817 Chorismate mutase type II FDV78_16145 PF00800 Prephenate dehydratase FDV78_16150 PF01931 Protein of unknown function DUF84 FDV78_16155 PF01371 Trp repressor protein FDV78_16160 PF14718 Soluble lytic murein transglycosylase L domain FDV78_16160 PF01464 Transglycosylase SLT domain FDV78_16165 PF00005 ABC transporter FDV78_16165 PF12848 ABC transporter FDV78_16175 PF07238 PilZ domain FDV78_16180 PF04225 Opacity-associated protein A LysM-like domain FDV78_16180 PF01551 Peptidase family M23 FDV78_16185 PF02153 Prephenate dehydrogenase FDV78_16185 PF01817 Chorismate mutase type II FDV78_16190 PF00793 DAHP synthetase I family FDV78_16195 PF00933 Glycosyl hydrolase family 3 N terminal domain FDV78_16200 PF03702 Anhydro-N-acetylmuramic acid kinase FDV78_16205 PF13580 SIS domain FDV78_16220 PF02554 Carbon starvation protein CstA FDV78_16225 PF06580 Histidine kinase FDV78_16225 PF07694 5TMR of 5TMR-LYT FDV78_16230 PF04397 LytTr DNA-binding domain FDV78_16230 PF00072 Response regulator receiver domain FDV78_16235 PF02401 LytB protein FDV78_16240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_16245 PF01252 Signal peptidase (SPase) II FDV78_16250 PF06827 Zinc finger found in FPG and IleRS FDV78_16250 PF00133 tRNA synthetases class I (I, L, M and V) FDV78_16250 PF08264 Anticodon-binding domain of tRNA FDV78_16255 PF06574 FAD synthetase FDV78_16255 PF01687 Riboflavin kinase FDV78_16260 PF03023 Lipid II flippase MurJ FDV78_16265 PF01649 Ribosomal protein S20 FDV78_16275 PF01022 Bacterial regulatory protein, arsR family FDV78_16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_16285 PF03466 LysR substrate binding domain FDV78_16290 PF02690 Na+/Pi-cotransporter FDV78_16300 PF00303 Thymidylate synthase FDV78_16305 PF01790 Prolipoprotein diacylglyceryl transferase FDV78_16310 PF01925 Sulfite exporter TauE/SafE FDV78_16315 PF01590 GAF domain FDV78_16315 PF00391 PEP-utilising enzyme, mobile domain FDV78_16315 PF02896 PEP-utilising enzyme, TIM barrel domain FDV78_16315 PF05524 PEP-utilising enzyme, N-terminal FDV78_16320 PF00293 NUDIX domain FDV78_16330 PF02976 DNA mismatch repair enzyme MutH FDV78_16340 PF00248 Aldo/keto reductase family FDV78_16350 PF02954 Bacterial regulatory protein, Fis family FDV78_16350 PF00072 Response regulator receiver domain FDV78_16350 PF00158 Sigma-54 interaction domain FDV78_16355 PF01336 OB-fold nucleic acid binding domain FDV78_16355 PF00152 tRNA synthetases class II (D, K and N) FDV78_16365 PF01368 DHH family FDV78_16365 PF02272 DHHA1 domain FDV78_16365 PF17768 RecJ OB domain FDV78_16370 PF13098 Thioredoxin-like domain FDV78_16370 PF10411 Disulfide bond isomerase protein N-terminus FDV78_16375 PF00589 Phage integrase family FDV78_16375 PF02899 Phage integrase, N-terminal SAM-like domain FDV78_16380 PF00258 Flavodoxin FDV78_16385 PF05525 Branched-chain amino acid transport protein FDV78_16390 PF05175 Methyltransferase small domain FDV78_16395 PF00270 DEAD/DEAH box helicase FDV78_16395 PF00271 Helicase conserved C-terminal domain FDV78_16400 PF03883 Peroxide stress protein YaaA FDV78_16405 PF01235 Sodium:alanine symporter family FDV78_16420 PF03167 Uracil DNA glycosylase superfamily FDV78_16430 PF01261 Xylose isomerase-like TIM barrel FDV78_16435 PF01228 Glycine radical FDV78_16440 PF14821 Threonine synthase N terminus FDV78_16440 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_16445 PF00288 GHMP kinases N terminal domain FDV78_16445 PF08544 GHMP kinases C terminal FDV78_16450 PF00696 Amino acid kinase family FDV78_16450 PF01842 ACT domain FDV78_16450 PF13840 ACT domain FDV78_16450 PF00742 Homoserine dehydrogenase FDV78_16450 PF03447 Homoserine dehydrogenase, NAD binding domain FDV78_16460 PF03737 Aldolase/RraA FDV78_16475 PF00486 Transcriptional regulatory protein, C terminal FDV78_16475 PF00072 Response regulator receiver domain FDV78_16485 PF00072 Response regulator receiver domain FDV78_16485 PF01627 Hpt domain FDV78_16485 PF18415 Histidine kinase receptor ArcB trans-membrane domain FDV78_16485 PF00512 His Kinase A (phospho-acceptor) domain FDV78_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_16485 PF00989 PAS fold FDV78_16490 PF00360 Phytochrome region FDV78_16490 PF00990 Diguanylate cyclase, GGDEF domain FDV78_16490 PF01590 GAF domain FDV78_16490 PF00563 EAL domain FDV78_16495 PF16199 Radical_SAM C-terminal domain FDV78_16495 PF04055 Radical SAM superfamily FDV78_16500 PF04898 Glutamate synthase central domain FDV78_16500 PF01645 Conserved region in glutamate synthase FDV78_16500 PF00310 Glutamine amidotransferases class-II FDV78_16500 PF01493 GXGXG motif FDV78_16505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV78_16505 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_16510 PF01645 Conserved region in glutamate synthase FDV78_16510 PF01493 GXGXG motif FDV78_16510 PF00310 Glutamine amidotransferases class-II FDV78_16510 PF04898 Glutamate synthase central domain FDV78_16515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_16515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV78_16525 PF01048 Phosphorylase superfamily FDV78_16530 PF03186 CobD/Cbib protein FDV78_16530 PF17113 Regulatory signalling modulator protein AmpE FDV78_16535 PF01497 Periplasmic binding protein FDV78_16540 PF03458 UPF0126 domain FDV78_16545 PF03466 LysR substrate binding domain FDV78_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_16550 PF01925 Sulfite exporter TauE/SafE FDV78_16565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDV78_16565 PF02142 MGS-like domain FDV78_16565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV78_16570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDV78_16570 PF00117 Glutamine amidotransferase class-I FDV78_16575 PF01113 Dihydrodipicolinate reductase, N-terminus FDV78_16575 PF05173 Dihydrodipicolinate reductase, C-terminus FDV78_16580 PF00293 NUDIX domain FDV78_16585 PF02810 SEC-C motif FDV78_16585 PF07516 SecA Wing and Scaffold domain FDV78_16585 PF07517 SecA DEAD-like domain FDV78_16585 PF01043 SecA preprotein cross-linking domain FDV78_16595 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDV78_16600 PF12327 FtsZ family, C-terminal domain FDV78_16600 PF00091 Tubulin/FtsZ family, GTPase domain FDV78_16605 PF02491 SHS2 domain inserted in FTSA FDV78_16610 PF03799 Cell division protein FtsQ FDV78_16610 PF08478 POTRA domain, FtsQ-type FDV78_16615 PF02875 Mur ligase family, glutamate ligase domain FDV78_16615 PF08245 Mur ligase middle domain FDV78_16615 PF01225 Mur ligase family, catalytic domain FDV78_16620 PF04101 Glycosyltransferase family 28 C-terminal domain FDV78_16620 PF03033 Glycosyltransferase family 28 N-terminal domain FDV78_16625 PF01098 Cell cycle protein FDV78_16630 PF08245 Mur ligase middle domain FDV78_16630 PF02875 Mur ligase family, glutamate ligase domain FDV78_16635 PF00953 Glycosyl transferase family 4 FDV78_16635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FDV78_16640 PF02875 Mur ligase family, glutamate ligase domain FDV78_16640 PF08245 Mur ligase middle domain FDV78_16640 PF01225 Mur ligase family, catalytic domain FDV78_16645 PF01225 Mur ligase family, catalytic domain FDV78_16645 PF02875 Mur ligase family, glutamate ligase domain FDV78_16645 PF08245 Mur ligase middle domain FDV78_16650 PF00905 Penicillin binding protein transpeptidase domain FDV78_16650 PF03717 Penicillin-binding Protein dimerisation domain FDV78_16655 PF04999 Cell division protein FtsL FDV78_16660 PF01795 MraW methylase family FDV78_16675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV78_16680 PF04348 LppC putative lipoprotein FDV78_16685 PF02021 Uncharacterised protein family UPF0102 FDV78_16690 PF13580 SIS domain FDV78_16695 PF04972 BON domain FDV78_16700 PF04386 Stringent starvation protein B FDV78_16705 PF00043 Glutathione S-transferase, C-terminal domain FDV78_16705 PF02798 Glutathione S-transferase, N-terminal domain FDV78_16710 PF02167 Cytochrome C1 family FDV78_16715 PF00033 Cytochrome b/b6/petB FDV78_16715 PF00032 Cytochrome b(C-terminal)/b6/petD FDV78_16720 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FDV78_16720 PF00355 Rieske [2Fe-2S] domain FDV78_16725 PF00380 Ribosomal protein S9/S16 FDV78_16730 PF00572 Ribosomal protein L13 FDV78_16740 PF03969 AFG1-like ATPase FDV78_16750 PF06295 Protein of unknown function (DUF1043) FDV78_16755 PF00595 PDZ domain FDV78_16760 PF13180 PDZ domain FDV78_16765 PF00521 DNA gyrase/topoisomerase IV, subunit A FDV78_16765 PF03989 DNA gyrase C-terminal domain, beta-propeller FDV78_16770 PF00204 DNA gyrase B FDV78_16770 PF01751 Toprim domain FDV78_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_16770 PF00986 DNA gyrase B subunit, carboxyl terminus FDV78_16775 PF05728 Uncharacterised protein family (UPF0227) FDV78_16780 PF00149 Calcineurin-like phosphoesterase FDV78_16785 PF06853 Protein of unknown function (DUF1249) FDV78_16790 PF00293 NUDIX domain FDV78_16795 PF02321 Outer membrane efflux protein FDV78_16800 PF01467 Cytidylyltransferase-like FDV78_16800 PF00294 pfkB family carbohydrate kinase FDV78_16805 PF03710 Glutamate-ammonia ligase adenylyltransferase FDV78_16805 PF08335 GlnD PII-uridylyltransferase FDV78_16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_16810 PF00672 HAMP domain FDV78_16820 PF01928 CYTH domain FDV78_16825 PF01865 Protein of unknown function DUF47 FDV78_16830 PF01384 Phosphate transporter family FDV78_16835 PF08239 Bacterial SH3 domain FDV78_16845 PF01471 Putative peptidoglycan binding domain FDV78_16845 PF13401 AAA domain FDV78_16850 PF01966 HD domain FDV78_16850 PF01743 Poly A polymerase head domain FDV78_16850 PF12627 Probable RNA and SrmB- binding site of polymerase A FDV78_16855 PF02673 Bacitracin resistance protein BacA FDV78_16860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDV78_16865 PF02152 Dihydroneopterin aldolase FDV78_16870 PF02660 Glycerol-3-phosphate acyltransferase FDV78_16875 PF12697 Alpha/beta hydrolase family FDV78_16880 PF00814 Glycoprotease family FDV78_16885 PF01165 Ribosomal protein S21 FDV78_16890 PF09424 Yqey-like protein FDV78_16895 PF08278 DNA primase DnaG DnaB-binding FDV78_16895 PF10410 DnaB-helicase binding domain of primase FDV78_16895 PF08275 DNA primase catalytic core, N-terminal domain FDV78_16895 PF01807 CHC2 zinc finger FDV78_16900 PF04546 Sigma-70, non-essential region FDV78_16900 PF03979 Sigma-70 factor, region 1.1 FDV78_16900 PF00140 Sigma-70 factor, region 1.2 FDV78_16900 PF04539 Sigma-70 region 3 FDV78_16900 PF04545 Sigma-70, region 4 FDV78_16900 PF04542 Sigma-70 region 2 FDV78_16950 PF07196 Flagellin hook IN motif FDV78_16950 PF00700 Bacterial flagellin C-terminal helical region FDV78_16950 PF00669 Bacterial flagellin N-terminal helical region FDV78_16955 PF00589 Phage integrase family FDV78_16960 PF03180 NLPA lipoprotein FDV78_16995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_16995 PF02378 Phosphotransferase system, EIIC FDV78_16995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_17000 PF01232 Mannitol dehydrogenase Rossmann domain FDV78_17000 PF08125 Mannitol dehydrogenase C-terminal domain FDV78_17005 PF05068 Mannitol repressor FDV78_17010 PF13419 Haloacid dehalogenase-like hydrolase FDV78_17015 PF00672 HAMP domain FDV78_17015 PF00512 His Kinase A (phospho-acceptor) domain FDV78_17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_17020 PF00486 Transcriptional regulatory protein, C terminal FDV78_17020 PF00072 Response regulator receiver domain FDV78_17030 PF01380 SIS domain FDV78_17035 PF08220 DeoR-like helix-turn-helix domain FDV78_17035 PF00455 DeoR C terminal sensor domain FDV78_17045 PF00224 Pyruvate kinase, barrel domain FDV78_17045 PF02887 Pyruvate kinase, alpha/beta domain FDV78_17055 PF07694 5TMR of 5TMR-LYT FDV78_17055 PF00990 Diguanylate cyclase, GGDEF domain FDV78_17060 PF10369 Small subunit of acetolactate synthase FDV78_17065 PF00205 Thiamine pyrophosphate enzyme, central domain FDV78_17065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV78_17065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV78_17070 PF00501 AMP-binding enzyme FDV78_17075 PF03466 LysR substrate binding domain FDV78_17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_17095 PF08502 LeuA allosteric (dimerisation) domain FDV78_17095 PF00682 HMGL-like FDV78_17100 PF00180 Isocitrate/isopropylmalate dehydrogenase FDV78_17105 PF00330 Aconitase family (aconitate hydratase) FDV78_17110 PF00694 Aconitase C-terminal domain FDV78_17120 PF05099 Tellurite resistance protein TerB FDV78_17120 PF00226 DnaJ domain FDV78_17125 PF03968 OstA-like protein FDV78_17125 PF04453 LPS transport system D FDV78_17130 PF09312 SurA N-terminal domain FDV78_17135 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDV78_17140 PF00398 Ribosomal RNA adenine dimethylase FDV78_17145 PF04379 ApaG domain FDV78_17150 PF00149 Calcineurin-like phosphoesterase FDV78_17155 PF00186 Dihydrofolate reductase FDV78_17160 PF12821 Threonine/Serine exporter, ThrE FDV78_17165 PF06738 Putative threonine/serine exporter FDV78_17170 PF01926 50S ribosome-binding GTPase FDV78_17170 PF01018 GTP1/OBG FDV78_17175 PF01016 Ribosomal L27 protein FDV78_17180 PF00829 Ribosomal prokaryotic L21 protein FDV78_17185 PF00348 Polyprenyl synthetase FDV78_17195 PF00056 lactate/malate dehydrogenase, NAD binding domain FDV78_17195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDV78_17200 PF02863 Arginine repressor, C-terminal domain FDV78_17200 PF01316 Arginine repressor, DNA binding domain FDV78_17210 PF16868 NMT1-like family FDV78_17230 PF00005 ABC transporter FDV78_17235 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_17245 PF02441 Flavoprotein FDV78_17250 PF08245 Mur ligase middle domain FDV78_17250 PF01225 Mur ligase family, catalytic domain FDV78_17250 PF02875 Mur ligase family, glutamate ligase domain FDV78_17260 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDV78_17265 PF00719 Inorganic pyrophosphatase FDV78_17275 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FDV78_17280 PF04357 TamB, inner membrane protein subunit of TAM complex FDV78_17285 PF01103 Surface antigen FDV78_17285 PF17243 POTRA domain TamA domain 1 FDV78_17290 PF01625 Peptide methionine sulfoxide reductase FDV78_17295 PF06526 Protein of unknown function (DUF1107) FDV78_17300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDV78_17305 PF10795 Protein of unknown function (DUF2607) FDV78_17315 PF00005 ABC transporter FDV78_17340 PF02080 TrkA-C domain FDV78_17340 PF03600 Citrate transporter FDV78_17350 PF00009 Elongation factor Tu GTP binding domain FDV78_17355 PF01507 Phosphoadenosine phosphosulfate reductase family FDV78_17360 PF10414 Sirohaem synthase dimerisation region FDV78_17360 PF14824 Sirohaem biosynthesis protein central FDV78_17360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV78_17365 PF00149 Calcineurin-like phosphoesterase FDV78_17365 PF02872 5'-nucleotidase, C-terminal domain FDV78_17375 PF00270 DEAD/DEAH box helicase FDV78_17375 PF00271 Helicase conserved C-terminal domain FDV78_17375 PF03880 DbpA RNA binding domain FDV78_17380 PF13673 Acetyltransferase (GNAT) domain FDV78_17390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV78_17390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_17400 PF01196 Ribosomal protein L17 FDV78_17405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDV78_17405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDV78_17405 PF01000 RNA polymerase Rpb3/RpoA insert domain FDV78_17410 PF01479 S4 domain FDV78_17410 PF00163 Ribosomal protein S4/S9 N-terminal domain FDV78_17415 PF00411 Ribosomal protein S11 FDV78_17420 PF00416 Ribosomal protein S13/S18 FDV78_17425 PF00444 Ribosomal protein L36 FDV78_17430 PF00344 SecY translocase FDV78_17435 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDV78_17440 PF00327 Ribosomal protein L30p/L7e FDV78_17445 PF00333 Ribosomal protein S5, N-terminal domain FDV78_17445 PF03719 Ribosomal protein S5, C-terminal domain FDV78_17450 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDV78_17455 PF00347 Ribosomal protein L6 FDV78_17460 PF00410 Ribosomal protein S8 FDV78_17465 PF00253 Ribosomal protein S14p/S29e FDV78_17470 PF00673 ribosomal L5P family C-terminus FDV78_17470 PF00281 Ribosomal protein L5 FDV78_17475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDV78_17475 PF00467 KOW motif FDV78_17480 PF00238 Ribosomal protein L14p/L23e FDV78_17485 PF00366 Ribosomal protein S17 FDV78_17490 PF00831 Ribosomal L29 protein FDV78_17495 PF00252 Ribosomal protein L16p/L10e FDV78_17500 PF00189 Ribosomal protein S3, C-terminal domain FDV78_17500 PF07650 KH domain FDV78_17505 PF00237 Ribosomal protein L22p/L17e FDV78_17510 PF00203 Ribosomal protein S19 FDV78_17515 PF00181 Ribosomal Proteins L2, RNA binding domain FDV78_17515 PF03947 Ribosomal Proteins L2, C-terminal domain FDV78_17520 PF00276 Ribosomal protein L23 FDV78_17525 PF00573 Ribosomal protein L4/L1 family FDV78_17530 PF00297 Ribosomal protein L3 FDV78_17535 PF00338 Ribosomal protein S10p/S20e FDV78_17540 PF01197 Ribosomal protein L31 FDV78_17550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDV78_17550 PF00270 DEAD/DEAH box helicase FDV78_17550 PF17764 3′ DNA-binding domain (3′BD) FDV78_17550 PF00271 Helicase conserved C-terminal domain FDV78_17550 PF18074 Primosomal protein N C-terminal domain FDV78_17555 PF00356 Bacterial regulatory proteins, lacI family FDV78_17565 PF00227 Proteasome subunit FDV78_17570 PF07724 AAA domain (Cdc48 subfamily) FDV78_17570 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_17585 PF04002 RadC-like JAB domain FDV78_17615 PF01040 UbiA prenyltransferase family FDV78_17620 PF03737 Aldolase/RraA FDV78_17625 PF06005 Cell division protein ZapB FDV78_17635 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FDV78_17640 PF00455 DeoR C terminal sensor domain FDV78_17640 PF08220 DeoR-like helix-turn-helix domain FDV78_17660 PF00121 Triosephosphate isomerase FDV78_17695 PF00483 Nucleotidyl transferase FDV78_17700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDV78_17700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDV78_17700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDV78_17705 PF02719 Polysaccharide biosynthesis protein FDV78_17710 PF02397 Bacterial sugar transferase FDV78_17715 PF01370 NAD dependent epimerase/dehydratase family FDV78_17720 PF00535 Glycosyl transferase family 2 FDV78_17745 PF00535 Glycosyl transferase family 2 FDV78_17765 PF01527 Transposase FDV78_17805 PF06082 Exopolysaccharide biosynthesis protein YbjH FDV78_17810 PF01370 NAD dependent epimerase/dehydratase family FDV78_17815 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV78_17820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDV78_17825 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDV78_17835 PF13439 Glycosyltransferase Family 4 FDV78_17835 PF00534 Glycosyl transferases group 1 FDV78_17850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDV78_17855 PF01575 MaoC like domain FDV78_17860 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_17865 PF05523 WxcM-like, C-terminal FDV78_17870 PF00483 Nucleotidyl transferase FDV78_17875 PF16363 GDP-mannose 4,6 dehydratase FDV78_17885 PF01219 Prokaryotic diacylglycerol kinase FDV78_17890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDV78_17895 PF00535 Glycosyl transferase family 2 FDV78_17900 PF00535 Glycosyl transferase family 2 FDV78_17905 PF05686 Glycosyl transferase family 90 FDV78_17910 PF01467 Cytidylyltransferase-like FDV78_17915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDV78_17915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDV78_17915 PF06827 Zinc finger found in FPG and IleRS FDV78_17925 PF00471 Ribosomal protein L33 FDV78_17930 PF00830 Ribosomal L28 family FDV78_17935 PF04002 RadC-like JAB domain FDV78_17940 PF00672 HAMP domain FDV78_17940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_17940 PF17200 Single Cache domain 2 FDV78_17950 PF02441 Flavoprotein FDV78_17950 PF04127 DNA / pantothenate metabolism flavoprotein FDV78_17955 PF00440 Bacterial regulatory proteins, tetR family FDV78_17960 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV78_17965 PF00156 Phosphoribosyl transferase domain FDV78_17970 PF03725 3' exoribonuclease family, domain 2 FDV78_17970 PF01138 3' exoribonuclease family, domain 1 FDV78_17975 PF08340 Domain of unknown function (DUF1732) FDV78_17975 PF03755 YicC-like family, N-terminal region FDV78_18000 PF00082 Subtilase family FDV78_18005 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_18010 PF04002 RadC-like JAB domain FDV78_18070 PF00075 RNase H FDV78_18105 PF00005 ABC transporter FDV78_18105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_18110 PF00005 ABC transporter FDV78_18110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_18115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_18120 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_18120 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV78_18125 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_18135 PF00593 TonB dependent receptor FDV78_18135 PF07715 TonB-dependent Receptor Plug Domain FDV78_18150 PF01618 MotA/TolQ/ExbB proton channel family FDV78_18155 PF02472 Biopolymer transport protein ExbD/TolR FDV78_18170 PF00625 Guanylate kinase FDV78_18175 PF01192 RNA polymerase Rpb6 FDV78_18180 PF02824 TGS domain FDV78_18180 PF04607 Region found in RelA / SpoT proteins FDV78_18180 PF13291 ACT domain FDV78_18185 PF00588 SpoU rRNA Methylase family FDV78_18185 PF12105 SpoU, rRNA methylase, C-terminal FDV78_18190 PF00270 DEAD/DEAH box helicase FDV78_18190 PF00271 Helicase conserved C-terminal domain FDV78_18190 PF17191 RecG wedge domain FDV78_18200 PF00860 Permease family FDV78_18205 PF00512 His Kinase A (phospho-acceptor) domain FDV78_18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_18205 PF00672 HAMP domain FDV78_18210 PF00072 Response regulator receiver domain FDV78_18210 PF00486 Transcriptional regulatory protein, C terminal FDV78_18220 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV78_18220 PF03449 Transcription elongation factor, N-terminal FDV78_18230 PF17674 HHH domain FDV78_18230 PF09371 Tex-like protein N-terminal domain FDV78_18230 PF16921 Tex protein YqgF-like domain FDV78_18230 PF00575 S1 RNA binding domain FDV78_18240 PF00561 alpha/beta hydrolase fold FDV78_18245 PF00156 Phosphoribosyl transferase domain FDV78_18250 PF01106 NifU-like domain FDV78_18250 PF01521 Iron-sulphur cluster biosynthesis FDV78_18255 PF00293 NUDIX domain FDV78_18260 PF00459 Inositol monophosphatase family FDV78_18265 PF01203 Type II secretion system (T2SS), protein N FDV78_18270 PF04612 Type II secretion system (T2SS), protein M FDV78_18275 PF05134 Type II secretion system (T2SS), protein L FDV78_18275 PF12693 GspL periplasmic domain FDV78_18280 PF03934 Type II secretion system (T2SS), protein K FDV78_18285 PF11612 Type II secretion system (T2SS), protein J FDV78_18285 PF07963 Prokaryotic N-terminal methylation motif FDV78_18290 PF07963 Prokaryotic N-terminal methylation motif FDV78_18290 PF02501 Type II secretion system (T2SS), protein I FDV78_18295 PF12019 Type II transport protein GspH FDV78_18300 PF07963 Prokaryotic N-terminal methylation motif FDV78_18300 PF08334 Type II secretion system (T2SS), protein G FDV78_18305 PF00482 Type II secretion system (T2SS), protein F FDV78_18310 PF00437 Type II/IV secretion system protein FDV78_18315 PF03958 Bacterial type II/III secretion system short domain FDV78_18315 PF00263 Bacterial type II and III secretion system protein FDV78_18320 PF11356 Type II secretion system protein C FDV78_18325 PF01479 S4 domain FDV78_18330 PF01430 Hsp33 protein FDV78_18335 PF01293 Phosphoenolpyruvate carboxykinase FDV78_18345 PF09500 Putative thioesterase (yiiD_Cterm) FDV78_18345 PF00583 Acetyltransferase (GNAT) family FDV78_18350 PF02580 D-Tyr-tRNA(Tyr) deacylase FDV78_18355 PF03631 Virulence factor BrkB FDV78_18390 PF04055 Radical SAM superfamily FDV78_18390 PF13186 Iron-sulfur cluster-binding domain FDV78_18395 PF00884 Sulfatase FDV78_18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18400 PF03466 LysR substrate binding domain FDV78_18405 PF01926 50S ribosome-binding GTPase FDV78_18410 PF00155 Aminotransferase class I and II FDV78_18415 PF00072 Response regulator receiver domain FDV78_18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_18425 PF00583 Acetyltransferase (GNAT) family FDV78_18425 PF00814 Glycoprotease family FDV78_18435 PF03606 C4-dicarboxylate anaerobic carrier FDV78_18440 PF04011 LemA family FDV78_18445 PF01435 Peptidase family M48 FDV78_18465 PF18081 Fanconi anemia-associated nuclease SAP domain FDV78_18465 PF08774 VRR-NUC domain FDV78_18475 PF04055 Radical SAM superfamily FDV78_18475 PF13186 Iron-sulfur cluster-binding domain FDV78_18495 PF04076 Bacterial OB fold (BOF) protein FDV78_18500 PF00781 Diacylglycerol kinase catalytic domain FDV78_18505 PF03466 LysR substrate binding domain FDV78_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV78_18525 PF00092 von Willebrand factor type A domain FDV78_18540 PF17863 AAA lid domain FDV78_18540 PF07726 ATPase family associated with various cellular activities (AAA) FDV78_18545 PF04055 Radical SAM superfamily FDV78_18545 PF13186 Iron-sulfur cluster-binding domain FDV78_18550 PF00884 Sulfatase FDV78_18555 PF03466 LysR substrate binding domain FDV78_18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18565 PF00884 Sulfatase FDV78_18570 PF16385 Domain of unknown function FDV78_18570 PF00884 Sulfatase FDV78_18575 PF00486 Transcriptional regulatory protein, C terminal FDV78_18575 PF00072 Response regulator receiver domain FDV78_18590 PF00072 Response regulator receiver domain FDV78_18590 PF00672 HAMP domain FDV78_18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_18590 PF00512 His Kinase A (phospho-acceptor) domain FDV78_18590 PF01627 Hpt domain FDV78_18595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV78_18600 PF02142 MGS-like domain FDV78_18605 PF00580 UvrD/REP helicase N-terminal domain FDV78_18605 PF12462 DNA helicase IV / RNA helicase N terminal FDV78_18605 PF13361 UvrD-like helicase C-terminal domain FDV78_18610 PF12805 FUSC-like inner membrane protein yccS FDV78_18645 PF00593 TonB dependent receptor FDV78_18645 PF07715 TonB-dependent Receptor Plug Domain FDV78_18650 PF12833 Helix-turn-helix domain FDV78_18660 PF13411 MerR HTH family regulatory protein FDV78_18665 PF00005 ABC transporter FDV78_18670 PF01032 FecCD transport family FDV78_18675 PF01032 FecCD transport family FDV78_18680 PF01497 Periplasmic binding protein FDV78_18705 PF04314 Copper chaperone PCu(A)C FDV78_18710 PF00012 Hsp70 protein FDV78_18725 PF00676 Dehydrogenase E1 component FDV78_18730 PF02779 Transketolase, pyrimidine binding domain FDV78_18730 PF02780 Transketolase, C-terminal domain FDV78_18735 PF02817 e3 binding domain FDV78_18735 PF00364 Biotin-requiring enzyme FDV78_18735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV78_18750 PF00043 Glutathione S-transferase, C-terminal domain FDV78_18750 PF02798 Glutathione S-transferase, N-terminal domain FDV78_18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18755 PF03466 LysR substrate binding domain FDV78_18765 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_18770 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_18775 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_18780 PF00005 ABC transporter FDV78_18785 PF01565 FAD binding domain FDV78_18785 PF08031 Berberine and berberine like FDV78_18790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV78_18805 PF01040 UbiA prenyltransferase family FDV78_18815 PF00510 Cytochrome c oxidase subunit III FDV78_18820 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV78_18825 PF06481 COX Aromatic Rich Motif FDV78_18825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDV78_18835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV78_18835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV78_18840 PF00378 Enoyl-CoA hydratase/isomerase FDV78_18845 PF00378 Enoyl-CoA hydratase/isomerase FDV78_18850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_18850 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_18850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_18855 PF00171 Aldehyde dehydrogenase family FDV78_18860 PF02803 Thiolase, C-terminal domain FDV78_18860 PF00108 Thiolase, N-terminal domain FDV78_18865 PF00376 MerR family regulatory protein FDV78_18865 PF09278 MerR, DNA binding FDV78_18870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_18870 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_18870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_18875 PF01039 Carboxyl transferase domain FDV78_18880 PF00378 Enoyl-CoA hydratase/isomerase FDV78_18885 PF00682 HMGL-like FDV78_18890 PF10063 Uncharacterized integral membrane protein (DUF2301) FDV78_18900 PF08447 PAS fold FDV78_18900 PF13426 PAS domain FDV78_18900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_18905 PF00871 Acetokinase family FDV78_18915 PF13426 PAS domain FDV78_18915 PF00990 Diguanylate cyclase, GGDEF domain FDV78_18915 PF00563 EAL domain FDV78_18920 PF00271 Helicase conserved C-terminal domain FDV78_18920 PF00270 DEAD/DEAH box helicase FDV78_18920 PF03880 DbpA RNA binding domain FDV78_18925 PF08206 Ribonuclease B OB domain FDV78_18925 PF00773 RNB domain FDV78_18925 PF00575 S1 RNA binding domain FDV78_18930 PF12833 Helix-turn-helix domain FDV78_18940 PF12849 PBP superfamily domain FDV78_18945 PF01575 MaoC like domain FDV78_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18955 PF03466 LysR substrate binding domain FDV78_18960 PF13186 Iron-sulfur cluster-binding domain FDV78_18960 PF04055 Radical SAM superfamily FDV78_18965 PF00884 Sulfatase FDV78_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_18970 PF03466 LysR substrate binding domain FDV78_18985 PF12729 Four helix bundle sensory module for signal transduction FDV78_18985 PF00672 HAMP domain FDV78_18985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_18990 PF00005 ABC transporter FDV78_18995 PF12792 CSS motif domain associated with EAL FDV78_18995 PF00563 EAL domain FDV78_19015 PF00271 Helicase conserved C-terminal domain FDV78_19015 PF00270 DEAD/DEAH box helicase FDV78_19020 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDV78_19020 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDV78_19030 PF01470 Pyroglutamyl peptidase FDV78_19040 PF00291 Pyridoxal-phosphate dependent enzyme FDV78_19045 PF09905 DNA-binding protein VF530 FDV78_19050 PF00271 Helicase conserved C-terminal domain FDV78_19050 PF00270 DEAD/DEAH box helicase FDV78_19055 PF12843 Putative quorum-sensing-regulated virulence factor FDV78_19080 PF01329 Pterin 4 alpha carbinolamine dehydratase FDV78_19085 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FDV78_19090 PF13193 AMP-binding enzyme C-terminal domain FDV78_19090 PF00501 AMP-binding enzyme FDV78_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19100 PF03466 LysR substrate binding domain FDV78_19125 PF00892 EamA-like transporter family FDV78_19140 PF00465 Iron-containing alcohol dehydrogenase FDV78_19145 PF07995 Glucose / Sorbosone dehydrogenase FDV78_19155 PF00210 Ferritin-like domain FDV78_19160 PF17200 Single Cache domain 2 FDV78_19160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_19160 PF00672 HAMP domain FDV78_19170 PF00005 ABC transporter FDV78_19170 PF12704 MacB-like periplasmic core domain FDV78_19170 PF02687 FtsX-like permease family FDV78_19175 PF00005 ABC transporter FDV78_19175 PF02687 FtsX-like permease family FDV78_19175 PF12704 MacB-like periplasmic core domain FDV78_19190 PF00990 Diguanylate cyclase, GGDEF domain FDV78_19200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_19200 PF13426 PAS domain FDV78_19200 PF08447 PAS fold FDV78_19205 PF03889 Alternative ribosome-rescue factor A FDV78_19210 PF00313 'Cold-shock' DNA-binding domain FDV78_19245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV78_19245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV78_19250 PF01040 UbiA prenyltransferase family FDV78_19255 PF02628 Cytochrome oxidase assembly protein FDV78_19275 PF00510 Cytochrome c oxidase subunit III FDV78_19280 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FDV78_19285 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV78_19290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDV78_19290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FDV78_19295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV78_19295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV78_19295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV78_19295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV78_19305 PF01810 LysE type translocator FDV78_19310 PF12833 Helix-turn-helix domain FDV78_19325 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDV78_19335 PF00267 Gram-negative porin FDV78_19340 PF00892 EamA-like transporter family FDV78_19345 PF00462 Glutaredoxin FDV78_19365 PF07690 Major Facilitator Superfamily FDV78_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19370 PF03466 LysR substrate binding domain FDV78_19375 PF08448 PAS fold FDV78_19375 PF00563 EAL domain FDV78_19375 PF08447 PAS fold FDV78_19375 PF00990 Diguanylate cyclase, GGDEF domain FDV78_19380 PF08525 Opacity-associated protein A N-terminal motif FDV78_19380 PF01476 LysM domain FDV78_19380 PF01551 Peptidase family M23 FDV78_19410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_19410 PF02743 Cache domain FDV78_19410 PF00672 HAMP domain FDV78_19420 PF03222 Tryptophan/tyrosine permease family FDV78_19455 PF00107 Zinc-binding dehydrogenase FDV78_19455 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_19460 PF02378 Phosphotransferase system, EIIC FDV78_19460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_19465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_19485 PF01758 Sodium Bile acid symporter family FDV78_19495 PF01161 Phosphatidylethanolamine-binding protein FDV78_19500 PF02567 Phenazine biosynthesis-like protein FDV78_19505 PF10282 Lactonase, 7-bladed beta-propeller FDV78_19515 PF00672 HAMP domain FDV78_19515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_19515 PF17200 Single Cache domain 2 FDV78_19525 PF00005 ABC transporter FDV78_19545 PF12838 4Fe-4S dicluster domain FDV78_19545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_19545 PF00384 Molybdopterin oxidoreductase FDV78_19545 PF01568 Molydopterin dinucleotide binding domain FDV78_19545 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDV78_19565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_19570 PF00873 AcrB/AcrD/AcrF family FDV78_19590 PF13185 GAF domain FDV78_19590 PF00990 Diguanylate cyclase, GGDEF domain FDV78_19600 PF13302 Acetyltransferase (GNAT) domain FDV78_19610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV78_19615 PF00873 AcrB/AcrD/AcrF family FDV78_19620 PF13533 Biotin-lipoyl like FDV78_19630 PF00326 Prolyl oligopeptidase family FDV78_19630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV78_19635 PF00005 ABC transporter FDV78_19635 PF12848 ABC transporter FDV78_19635 PF16326 ABC transporter C-terminal domain FDV78_19640 PF00582 Universal stress protein family FDV78_19645 PF02525 Flavodoxin-like fold FDV78_19650 PF02254 TrkA-N domain FDV78_19650 PF00999 Sodium/hydrogen exchanger family FDV78_19665 PF00128 Alpha amylase, catalytic domain FDV78_19675 PF01752 Collagenase FDV78_19675 PF04151 Bacterial pre-peptidase C-terminal domain FDV78_19675 PF08453 Peptidase family M9 N-terminal FDV78_19690 PF03466 LysR substrate binding domain FDV78_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19700 PF00210 Ferritin-like domain FDV78_19705 PF00141 Peroxidase FDV78_19725 PF00082 Subtilase family FDV78_19750 PF07690 Major Facilitator Superfamily FDV78_19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19755 PF03466 LysR substrate binding domain FDV78_19770 PF01584 CheW-like domain FDV78_19770 PF00072 Response regulator receiver domain FDV78_19780 PF01243 Pyridoxamine 5'-phosphate oxidase FDV78_19785 PF06228 Haem utilisation ChuX/HutX FDV78_19790 PF04055 Radical SAM superfamily FDV78_19795 PF03544 Gram-negative bacterial TonB protein C-terminal FDV78_19800 PF01618 MotA/TolQ/ExbB proton channel family FDV78_19805 PF02472 Biopolymer transport protein ExbD/TolR FDV78_19815 PF01032 FecCD transport family FDV78_19820 PF00005 ABC transporter FDV78_19865 PF01467 Cytidylyltransferase-like FDV78_19870 PF02540 NAD synthase FDV78_19875 PF03473 MOSC domain FDV78_19875 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_19875 PF03476 MOSC N-terminal beta barrel domain FDV78_19875 PF03476 MOSC N-terminal beta barrel domain FDV78_19875 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV78_19875 PF03473 MOSC domain FDV78_19885 PF01679 Proteolipid membrane potential modulator FDV78_19895 PF01979 Amidohydrolase family FDV78_19900 PF05661 Protein of unknown function (DUF808) FDV78_19930 PF01497 Periplasmic binding protein FDV78_19930 PF12833 Helix-turn-helix domain FDV78_19935 PF00155 Aminotransferase class I and II FDV78_19965 PF00535 Glycosyl transferase family 2 FDV78_19980 PF00270 DEAD/DEAH box helicase FDV78_19980 PF00271 Helicase conserved C-terminal domain FDV78_19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19990 PF03466 LysR substrate binding domain FDV78_19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_19995 PF03466 LysR substrate binding domain FDV78_20005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV78_20010 PF00107 Zinc-binding dehydrogenase FDV78_20010 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_20025 PF12833 Helix-turn-helix domain FDV78_20025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDV78_20035 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDV78_20050 PF03466 LysR substrate binding domain FDV78_20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20060 PF00710 Asparaginase, N-terminal FDV78_20060 PF17763 Glutaminase/Asparaginase C-terminal domain FDV78_20065 PF03618 Kinase/pyrophosphorylase FDV78_20070 PF00391 PEP-utilising enzyme, mobile domain FDV78_20070 PF02896 PEP-utilising enzyme, TIM barrel domain FDV78_20070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDV78_20075 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_20075 PF01610 Transposase FDV78_20075 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_20095 PF00579 tRNA synthetases class I (W and Y) FDV78_20100 PF13416 Bacterial extracellular solute-binding protein FDV78_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20110 PF03466 LysR substrate binding domain FDV78_20115 PF13533 Biotin-lipoyl like FDV78_20120 PF00873 AcrB/AcrD/AcrF family FDV78_20135 PF00990 Diguanylate cyclase, GGDEF domain FDV78_20135 PF07694 5TMR of 5TMR-LYT FDV78_20145 PF00196 Bacterial regulatory proteins, luxR family FDV78_20150 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FDV78_20150 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDV78_20150 PF00703 Glycosyl hydrolases family 2 FDV78_20150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDV78_20155 PF02028 BCCT, betaine/carnitine/choline family transporter FDV78_20160 PF07702 UTRA domain FDV78_20160 PF00392 Bacterial regulatory proteins, gntR family FDV78_20185 PF08402 TOBE domain FDV78_20185 PF00005 ABC transporter FDV78_20205 PF00873 AcrB/AcrD/AcrF family FDV78_20210 PF13533 Biotin-lipoyl like FDV78_20220 PF13091 PLD-like domain FDV78_20250 PF00376 MerR family regulatory protein FDV78_20250 PF09278 MerR, DNA binding FDV78_20265 PF03466 LysR substrate binding domain FDV78_20265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDV78_20275 PF13378 Enolase C-terminal domain-like FDV78_20285 PF00679 Elongation factor G C-terminus FDV78_20285 PF14492 Elongation Factor G, domain II FDV78_20285 PF03764 Elongation factor G, domain IV FDV78_20285 PF03144 Elongation factor Tu domain 2 FDV78_20285 PF00009 Elongation factor Tu GTP binding domain FDV78_20310 PF02001 Protein of unknown function DUF134 FDV78_20320 PF04170 NlpE N-terminal domain FDV78_20320 PF17185 NlpE C-terminal OB domain FDV78_20330 PF06629 MltA-interacting protein MipA FDV78_20340 PF00691 OmpA family FDV78_20340 PF01389 OmpA-like transmembrane domain FDV78_20345 PF03466 LysR substrate binding domain FDV78_20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDV78_20370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDV78_20380 PF00857 Isochorismatase family FDV78_20390 PF06628 Catalase-related immune-responsive FDV78_20390 PF00199 Catalase FDV78_20400 PF00455 DeoR C terminal sensor domain FDV78_20400 PF08220 DeoR-like helix-turn-helix domain FDV78_20405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_20410 PF01641 SelR domain FDV78_20410 PF01625 Peptide methionine sulfoxide reductase FDV78_20420 PF03466 LysR substrate binding domain FDV78_20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20435 PF03060 Nitronate monooxygenase FDV78_20440 PF00149 Calcineurin-like phosphoesterase FDV78_20440 PF02872 5'-nucleotidase, C-terminal domain FDV78_20450 PF00440 Bacterial regulatory proteins, tetR family FDV78_20450 PF08359 YsiA-like protein, C-terminal region FDV78_20465 PF03466 LysR substrate binding domain FDV78_20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20470 PF01810 LysE type translocator FDV78_20485 PF00118 TCP-1/cpn60 chaperonin family FDV78_20490 PF00166 Chaperonin 10 Kd subunit FDV78_20500 PF00581 Rhodanese-like domain FDV78_20525 PF01070 FMN-dependent dehydrogenase FDV78_20545 PF00669 Bacterial flagellin N-terminal helical region FDV78_20550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_20550 PF00460 Flagella basal body rod protein FDV78_20555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDV78_20555 PF10135 Rod binding protein FDV78_20560 PF02119 Flagellar P-ring protein FDV78_20565 PF02107 Flagellar L-ring protein FDV78_20570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_20570 PF00460 Flagella basal body rod protein FDV78_20575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_20575 PF00460 Flagella basal body rod protein FDV78_20580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_20580 PF00460 Flagella basal body rod protein FDV78_20580 PF07559 Flagellar basal body protein FlaE FDV78_20585 PF13860 FlgD Ig-like domain FDV78_20585 PF03963 Flagellar hook capping protein - N-terminal region FDV78_20585 PF13861 FlgD Tudor-like domain FDV78_20590 PF00460 Flagella basal body rod protein FDV78_20590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV78_20595 PF00460 Flagella basal body rod protein FDV78_20615 PF01464 Transglycosylase SLT domain FDV78_20625 PF08264 Anticodon-binding domain of tRNA FDV78_20625 PF00133 tRNA synthetases class I (I, L, M and V) FDV78_20645 PF03313 Serine dehydratase alpha chain FDV78_20645 PF03315 Serine dehydratase beta chain FDV78_20650 PF00854 POT family FDV78_20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20660 PF03466 LysR substrate binding domain FDV78_20670 PF03466 LysR substrate binding domain FDV78_20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20675 PF01389 OmpA-like transmembrane domain FDV78_20675 PF00691 OmpA family FDV78_20685 PF18027 Cytosolic carboxypeptidase N-terminal domain FDV78_20685 PF00246 Zinc carboxypeptidase FDV78_20690 PF01266 FAD dependent oxidoreductase FDV78_20700 PF04393 Protein of unknown function (DUF535) FDV78_20715 PF00392 Bacterial regulatory proteins, gntR family FDV78_20715 PF07702 UTRA domain FDV78_20720 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_20725 PF00005 ABC transporter FDV78_20740 PF00266 Aminotransferase class-V FDV78_20750 PF13419 Haloacid dehalogenase-like hydrolase FDV78_20755 PF00356 Bacterial regulatory proteins, lacI family FDV78_20760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_20770 PF03611 PTS system sugar-specific permease component FDV78_20780 PF05922 Peptidase inhibitor I9 FDV78_20780 PF00082 Subtilase family FDV78_20785 PF00657 GDSL-like Lipase/Acylhydrolase FDV78_20790 PF02321 Outer membrane efflux protein FDV78_20795 PF02687 FtsX-like permease family FDV78_20795 PF00005 ABC transporter FDV78_20795 PF12704 MacB-like periplasmic core domain FDV78_20800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_20805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV78_20810 PF00194 Eukaryotic-type carbonic anhydrase FDV78_20815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDV78_20830 PF13419 Haloacid dehalogenase-like hydrolase FDV78_20835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_20835 PF03466 LysR substrate binding domain FDV78_20870 PF12464 Maltose acetyltransferase FDV78_20870 PF14602 Hexapeptide repeat of succinyl-transferase FDV78_20875 PF02566 OsmC-like protein FDV78_20880 PF01641 SelR domain FDV78_20880 PF01625 Peptide methionine sulfoxide reductase FDV78_20895 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FDV78_20900 PF03441 FAD binding domain of DNA photolyase FDV78_20900 PF00875 DNA photolyase FDV78_20905 PF00990 Diguanylate cyclase, GGDEF domain FDV78_20920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_20920 PF00672 HAMP domain FDV78_20920 PF12729 Four helix bundle sensory module for signal transduction FDV78_20925 PF00990 Diguanylate cyclase, GGDEF domain FDV78_20925 PF05230 MASE2 domain FDV78_20930 PF13532 2OG-Fe(II) oxygenase superfamily FDV78_20940 PF07670 Nucleoside recognition FDV78_20940 PF07662 Na+ dependent nucleoside transporter C-terminus FDV78_20940 PF01773 Na+ dependent nucleoside transporter N-terminus FDV78_20960 PF01212 Beta-eliminating lyase FDV78_20970 PF01266 FAD dependent oxidoreductase FDV78_20995 PF05525 Branched-chain amino acid transport protein FDV78_21000 PF05230 MASE2 domain FDV78_21000 PF00990 Diguanylate cyclase, GGDEF domain FDV78_21005 PF00158 Sigma-54 interaction domain FDV78_21005 PF00072 Response regulator receiver domain FDV78_21005 PF02954 Bacterial regulatory protein, Fis family FDV78_21010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_21010 PF00512 His Kinase A (phospho-acceptor) domain FDV78_21010 PF02743 Cache domain FDV78_21020 PF00232 Glycosyl hydrolase family 1 FDV78_21035 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_21035 PF01610 Transposase FDV78_21035 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_21050 PF03466 LysR substrate binding domain FDV78_21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21060 PF08443 RimK-like ATP-grasp domain FDV78_21060 PF18030 RimK PreATP-grasp domain FDV78_21065 PF08443 RimK-like ATP-grasp domain FDV78_21065 PF18030 RimK PreATP-grasp domain FDV78_21070 PF00753 Metallo-beta-lactamase superfamily FDV78_21075 PF17810 Arginine decarboxylase helical bundle domain FDV78_21075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV78_21075 PF17944 Arginine decarboxylase C-terminal helical extension FDV78_21080 PF00491 Arginase family FDV78_21085 PF07690 Major Facilitator Superfamily FDV78_21090 PF00326 Prolyl oligopeptidase family FDV78_21090 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV78_21105 PF00950 ABC 3 transport family FDV78_21110 PF00005 ABC transporter FDV78_21115 PF01297 Zinc-uptake complex component A periplasmic FDV78_21155 PF02472 Biopolymer transport protein ExbD/TolR FDV78_21160 PF01618 MotA/TolQ/ExbB proton channel family FDV78_21165 PF01618 MotA/TolQ/ExbB proton channel family FDV78_21175 PF07715 TonB-dependent Receptor Plug Domain FDV78_21175 PF00593 TonB dependent receptor FDV78_21180 PF16750 Sensor domain of 2-component histidine kinase FDV78_21180 PF00672 HAMP domain FDV78_21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_21180 PF00512 His Kinase A (phospho-acceptor) domain FDV78_21185 PF00072 Response regulator receiver domain FDV78_21185 PF00486 Transcriptional regulatory protein, C terminal FDV78_21190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDV78_21190 PF00056 lactate/malate dehydrogenase, NAD binding domain FDV78_21195 PF03009 Glycerophosphoryl diester phosphodiesterase family FDV78_21205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV78_21205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV78_21210 PF10928 Protein of unknown function (DUF2810) FDV78_21265 PF04013 Putative SAM-dependent RNA methyltransferase FDV78_21270 PF01523 Putative modulator of DNA gyrase FDV78_21275 PF01523 Putative modulator of DNA gyrase FDV78_21285 PF08543 Phosphomethylpyrimidine kinase FDV78_21290 PF00005 ABC transporter FDV78_21295 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_21300 PF09084 NMT1/THI5 like FDV78_21305 PF03070 TENA/THI-4/PQQC family FDV78_21310 PF02110 Hydroxyethylthiazole kinase family FDV78_21315 PF02581 Thiamine monophosphate synthase FDV78_21325 PF00384 Molybdopterin oxidoreductase FDV78_21325 PF01568 Molydopterin dinucleotide binding domain FDV78_21325 PF18364 Molybdopterin oxidoreductase N-terminal domain FDV78_21330 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV78_21355 PF00583 Acetyltransferase (GNAT) family FDV78_21375 PF00392 Bacterial regulatory proteins, gntR family FDV78_21375 PF00155 Aminotransferase class I and II FDV78_21380 PF02595 Glycerate kinase family FDV78_21385 PF02447 GntP family permease FDV78_21390 PF17853 GGDEF-like domain FDV78_21390 PF05651 Putative sugar diacid recognition FDV78_21390 PF13556 PucR C-terminal helix-turn-helix domain FDV78_21415 PF13419 Haloacid dehalogenase-like hydrolase FDV78_21430 PF03466 LysR substrate binding domain FDV78_21430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21435 PF03466 LysR substrate binding domain FDV78_21440 PF00884 Sulfatase FDV78_21445 PF04055 Radical SAM superfamily FDV78_21445 PF13186 Iron-sulfur cluster-binding domain FDV78_21450 PF03466 LysR substrate binding domain FDV78_21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21460 PF03466 LysR substrate binding domain FDV78_21465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_21470 PF01661 Macro domain FDV78_21475 PF01204 Trehalase FDV78_21485 PF12706 Beta-lactamase superfamily domain FDV78_21495 PF07690 Major Facilitator Superfamily FDV78_21500 PF13533 Biotin-lipoyl like FDV78_21505 PF03922 OmpW family FDV78_21510 PF13599 Pentapeptide repeats (9 copies) FDV78_21525 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDV78_21525 PF18416 N-acetylglucosamine binding protein domain 2 FDV78_21530 PF01037 Lrp/AsnC ligand binding domain FDV78_21535 PF01810 LysE type translocator FDV78_21540 PF08021 Siderophore-interacting FAD-binding domain FDV78_21540 PF04954 Siderophore-interacting protein FDV78_21545 PF14583 Oligogalacturonate lyase FDV78_21550 PF00474 Sodium:solute symporter family FDV78_21555 PF13229 Right handed beta helix region FDV78_21570 PF01081 KDPG and KHG aldolase FDV78_21575 PF00294 pfkB family carbohydrate kinase FDV78_21590 PF07883 Cupin domain FDV78_21595 PF10688 Bacterial inner membrane protein FDV78_21605 PF01614 Bacterial transcriptional regulator FDV78_21605 PF09339 IclR helix-turn-helix domain FDV78_21620 PF03466 LysR substrate binding domain FDV78_21620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21625 PF00797 N-acetyltransferase FDV78_21630 PF00107 Zinc-binding dehydrogenase FDV78_21630 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_21635 PF00756 Putative esterase FDV78_21645 PF17152 Periplasmic sensor domain FDV78_21645 PF00990 Diguanylate cyclase, GGDEF domain FDV78_21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21660 PF03466 LysR substrate binding domain FDV78_21675 PF00849 RNA pseudouridylate synthase FDV78_21680 PF01554 MatE FDV78_21690 PF00990 Diguanylate cyclase, GGDEF domain FDV78_21690 PF00563 EAL domain FDV78_21700 PF06865 Pyrimidine/purine nucleoside phosphorylase FDV78_21710 PF08329 Chitinase A, N-terminal domain FDV78_21710 PF00704 Glycosyl hydrolases family 18 FDV78_21730 PF03600 Citrate transporter FDV78_21740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FDV78_21750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDV78_21750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDV78_21755 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV78_21755 PF06029 AlkA N-terminal domain FDV78_21770 PF07681 DoxX FDV78_21775 PF17954 Quercetinase C-terminal cupin domain FDV78_21775 PF02678 Pirin FDV78_21780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_21780 PF03466 LysR substrate binding domain FDV78_21795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDV78_21810 PF03616 Sodium/glutamate symporter FDV78_21815 PF00155 Aminotransferase class I and II FDV78_21815 PF00392 Bacterial regulatory proteins, gntR family FDV78_21820 PF00005 ABC transporter FDV78_21830 PF03616 Sodium/glutamate symporter FDV78_21845 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_21860 PF00672 HAMP domain FDV78_21860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_21860 PF17200 Single Cache domain 2 FDV78_21865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV78_21875 PF00072 Response regulator receiver domain FDV78_21875 PF04397 LytTr DNA-binding domain FDV78_21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_21880 PF06580 Histidine kinase FDV78_21880 PF13492 GAF domain FDV78_21880 PF07694 5TMR of 5TMR-LYT FDV78_21900 PF00005 ABC transporter FDV78_21915 PF01098 Cell cycle protein FDV78_21920 PF01709 Transcriptional regulator FDV78_21930 PF17149 Periplasmic sensor domain found in signal transduction proteins FDV78_21930 PF00672 HAMP domain FDV78_21930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_21930 PF00512 His Kinase A (phospho-acceptor) domain FDV78_21930 PF01627 Hpt domain FDV78_21930 PF00072 Response regulator receiver domain FDV78_21945 PF08719 Domain of unknown function (DUF1768) FDV78_21945 PF00925 GTP cyclohydrolase II FDV78_21955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_21955 PF00005 ABC transporter FDV78_21960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_21960 PF00005 ABC transporter FDV78_21975 PF18607 ParA helix turn helix domain FDV78_21975 PF13614 AAA domain FDV78_21980 PF02195 ParB-like nuclease domain FDV78_21980 PF08775 ParB family FDV78_21985 PF05127 Helicase FDV78_21985 PF13718 GNAT acetyltransferase 2 FDV78_21995 PF00132 Bacterial transferase hexapeptide (six repeats) FDV78_22005 PF03575 Peptidase family S51 FDV78_22010 PF00267 Gram-negative porin FDV78_22015 PF02378 Phosphotransferase system, EIIC FDV78_22015 PF00367 phosphotransferase system, EIIB FDV78_22020 PF01380 SIS domain FDV78_22030 PF01418 Helix-turn-helix domain, rpiR family FDV78_22030 PF01380 SIS domain FDV78_22035 PF00246 Zinc carboxypeptidase FDV78_22040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_22045 PF03358 NADPH-dependent FMN reductase FDV78_22055 PF03412 Peptidase C39 family FDV78_22055 PF00664 ABC transporter transmembrane region FDV78_22055 PF00005 ABC transporter FDV78_22070 PF00529 HlyD membrane-fusion protein of T1SS FDV78_22075 PF00158 Sigma-54 interaction domain FDV78_22075 PF00072 Response regulator receiver domain FDV78_22075 PF02954 Bacterial regulatory protein, Fis family FDV78_22080 PF00512 His Kinase A (phospho-acceptor) domain FDV78_22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_22080 PF02743 Cache domain FDV78_22085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDV78_22085 PF01243 Pyridoxamine 5'-phosphate oxidase FDV78_22100 PF12833 Helix-turn-helix domain FDV78_22105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDV78_22105 PF01619 Proline dehydrogenase FDV78_22105 PF00171 Aldehyde dehydrogenase family FDV78_22105 PF14850 DNA-binding domain of Proline dehydrogenase FDV78_22115 PF00474 Sodium:solute symporter family FDV78_22150 PF01037 Lrp/AsnC ligand binding domain FDV78_22160 PF00664 ABC transporter transmembrane region FDV78_22160 PF00005 ABC transporter FDV78_22170 PF12833 Helix-turn-helix domain FDV78_22170 PF06719 AraC-type transcriptional regulator N-terminus FDV78_22190 PF10688 Bacterial inner membrane protein FDV78_22195 PF01081 KDPG and KHG aldolase FDV78_22200 PF00294 pfkB family carbohydrate kinase FDV78_22205 PF02614 Glucuronate isomerase FDV78_22210 PF08125 Mannitol dehydrogenase C-terminal domain FDV78_22210 PF01232 Mannitol dehydrogenase Rossmann domain FDV78_22215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDV78_22220 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FDV78_22225 PF03480 Bacterial extracellular solute-binding protein, family 7 FDV78_22230 PF07729 FCD domain FDV78_22230 PF00392 Bacterial regulatory proteins, gntR family FDV78_22235 PF03786 D-mannonate dehydratase (UxuA) FDV78_22240 PF00271 Helicase conserved C-terminal domain FDV78_22240 PF00270 DEAD/DEAH box helicase FDV78_22245 PF03475 3-alpha domain FDV78_22245 PF03473 MOSC domain FDV78_22260 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDV78_22260 PF02056 Family 4 glycosyl hydrolase FDV78_22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_22265 PF03466 LysR substrate binding domain FDV78_22270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_22270 PF00672 HAMP domain FDV78_22270 PF02743 Cache domain FDV78_22285 PF08281 Sigma-70, region 4 FDV78_22285 PF04542 Sigma-70 region 2 FDV78_22290 PF01965 DJ-1/PfpI family FDV78_22290 PF12833 Helix-turn-helix domain FDV78_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_22300 PF03466 LysR substrate binding domain FDV78_22320 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_22320 PF13192 Thioredoxin domain FDV78_22325 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDV78_22325 PF00578 AhpC/TSA family FDV78_22330 PF01047 MarR family FDV78_22335 PF02566 OsmC-like protein FDV78_22350 PF12833 Helix-turn-helix domain FDV78_22350 PF02311 AraC-like ligand binding domain FDV78_22360 PF02610 L-arabinose isomerase FDV78_22360 PF11762 L-arabinose isomerase C-terminal domain FDV78_22365 PF00596 Class II Aldolase and Adducin N-terminal domain FDV78_22370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDV78_22370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDV78_22375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV78_22380 PF00005 ABC transporter FDV78_22385 PF02653 Branched-chain amino acid transport system / permease component FDV78_22400 PF00367 phosphotransferase system, EIIB FDV78_22400 PF02378 Phosphotransferase system, EIIC FDV78_22410 PF00486 Transcriptional regulatory protein, C terminal FDV78_22410 PF00072 Response regulator receiver domain FDV78_22415 PF08521 Two-component sensor kinase N-terminal FDV78_22415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_22415 PF00512 His Kinase A (phospho-acceptor) domain FDV78_22420 PF01547 Bacterial extracellular solute-binding protein FDV78_22425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV78_22425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV78_22430 PF04183 IucA / IucC family FDV78_22430 PF06276 Ferric iron reductase FhuF-like transporter FDV78_22440 PF04183 IucA / IucC family FDV78_22440 PF06276 Ferric iron reductase FhuF-like transporter FDV78_22445 PF02655 ATP-grasp domain FDV78_22445 PF00206 Lyase FDV78_22450 PF07715 TonB-dependent Receptor Plug Domain FDV78_22450 PF00593 TonB dependent receptor FDV78_22455 PF07715 TonB-dependent Receptor Plug Domain FDV78_22455 PF00593 TonB dependent receptor FDV78_22455 PF07660 Secretin and TonB N terminus short domain FDV78_22460 PF01497 Periplasmic binding protein FDV78_22465 PF01032 FecCD transport family FDV78_22470 PF01032 FecCD transport family FDV78_22475 PF00005 ABC transporter FDV78_22480 PF17200 Single Cache domain 2 FDV78_22480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_22480 PF00672 HAMP domain FDV78_22485 PF05193 Peptidase M16 inactive domain FDV78_22485 PF00675 Insulinase (Peptidase family M16) FDV78_22495 PF04225 Opacity-associated protein A LysM-like domain FDV78_22495 PF01551 Peptidase family M23 FDV78_22505 PF07690 Major Facilitator Superfamily FDV78_22515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV78_22515 PF00128 Alpha amylase, catalytic domain FDV78_22520 PF02264 LamB porin FDV78_22535 PF00128 Alpha amylase, catalytic domain FDV78_22535 PF16657 Maltogenic Amylase, C-terminal domain FDV78_22535 PF02903 Alpha amylase, N-terminal ig-like domain FDV78_22545 PF04231 Endonuclease I FDV78_22550 PF18494 Pullulanase Ins domain FDV78_22550 PF17967 Pullulanase N2 domain FDV78_22550 PF03714 Bacterial pullanase-associated domain FDV78_22550 PF11852 Domain of unknown function (DUF3372) FDV78_22550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV78_22565 PF01276 Orn/Lys/Arg decarboxylase, major domain FDV78_22565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDV78_22565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDV78_22570 PF13520 Amino acid permease FDV78_22580 PF08543 Phosphomethylpyrimidine kinase FDV78_22590 PF00375 Sodium:dicarboxylate symporter family FDV78_22595 PF03193 RsgA GTPase FDV78_22600 PF00367 phosphotransferase system, EIIB FDV78_22600 PF02378 Phosphotransferase system, EIIC FDV78_22610 PF02630 SCO1/SenC FDV78_22625 PF17874 MalT-like TPR region FDV78_22625 PF00196 Bacterial regulatory proteins, luxR family FDV78_22640 PF00343 Carbohydrate phosphorylase FDV78_22645 PF02446 4-alpha-glucanotransferase FDV78_22650 PF02806 Alpha amylase, C-terminal all-beta domain FDV78_22650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV78_22650 PF00128 Alpha amylase, catalytic domain FDV78_22655 PF00912 Transglycosylase FDV78_22660 PF00128 Alpha amylase, catalytic domain FDV78_22675 PF07670 Nucleoside recognition FDV78_22680 PF07670 Nucleoside recognition FDV78_22685 PF07687 Peptidase dimerisation domain FDV78_22685 PF01546 Peptidase family M20/M25/M40 FDV78_22690 PF06803 Protein of unknown function (DUF1232) FDV78_22695 PF00375 Sodium:dicarboxylate symporter family FDV78_22705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_22705 PF03466 LysR substrate binding domain FDV78_22710 PF08803 Putative mono-oxygenase ydhR FDV78_22720 PF02706 Chain length determinant protein FDV78_22720 PF13807 G-rich domain on putative tyrosine kinase FDV78_22720 PF13614 AAA domain FDV78_22725 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDV78_22730 PF10531 SLBB domain FDV78_22730 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FDV78_22730 PF02563 Polysaccharide biosynthesis/export protein FDV78_22735 PF00881 Nitroreductase family FDV78_22740 PF01914 MarC family integral membrane protein FDV78_22745 PF01734 Patatin-like phospholipase FDV78_22750 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDV78_22750 PF18416 N-acetylglucosamine binding protein domain 2 FDV78_22765 PF00561 alpha/beta hydrolase fold FDV78_22770 PF00768 D-alanyl-D-alanine carboxypeptidase FDV78_22770 PF07943 Penicillin-binding protein 5, C-terminal domain FDV78_22775 PF00128 Alpha amylase, catalytic domain FDV78_22775 PF00686 Starch binding domain FDV78_22780 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDV78_22780 PF12833 Helix-turn-helix domain FDV78_22785 PF00881 Nitroreductase family FDV78_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_22795 PF03466 LysR substrate binding domain FDV78_22800 PF09905 DNA-binding protein VF530 FDV78_22810 PF00175 Oxidoreductase NAD-binding domain FDV78_22810 PF00970 Oxidoreductase FAD-binding domain FDV78_22820 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV78_22825 PF01594 AI-2E family transporter FDV78_22835 PF13533 Biotin-lipoyl like FDV78_22860 PF00892 EamA-like transporter family FDV78_22865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_22865 PF03466 LysR substrate binding domain FDV78_22870 PF07690 Major Facilitator Superfamily FDV78_22885 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_22885 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_22885 PF01610 Transposase FDV78_22890 PF00583 Acetyltransferase (GNAT) family FDV78_22900 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDV78_22905 PF04055 Radical SAM superfamily FDV78_22910 PF02901 Pyruvate formate lyase-like FDV78_22910 PF01228 Glycine radical FDV78_22930 PF08000 Bacterial PH domain FDV78_22940 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDV78_22940 PF00691 OmpA family FDV78_22945 PF01618 MotA/TolQ/ExbB proton channel family FDV78_22950 PF04542 Sigma-70 region 2 FDV78_22950 PF04545 Sigma-70, region 4 FDV78_22955 PF03748 Flagellar basal body-associated protein FliL FDV78_22970 PF02561 Flagellar protein FliS FDV78_22975 PF07195 Flagellar hook-associated protein 2 C-terminus FDV78_22975 PF02465 Flagellar hook-associated protein 2 N-terminus FDV78_22975 PF07196 Flagellin hook IN motif FDV78_22985 PF00669 Bacterial flagellin N-terminal helical region FDV78_22985 PF00700 Bacterial flagellin C-terminal helical region FDV78_22995 PF00771 FHIPEP family FDV78_23000 PF01312 FlhB HrpN YscU SpaS Family FDV78_23005 PF01311 Bacterial export proteins, family 1 FDV78_23010 PF01313 Bacterial export proteins, family 3 FDV78_23015 PF00813 FliP family FDV78_23020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV78_23035 PF00072 Response regulator receiver domain FDV78_23035 PF02954 Bacterial regulatory protein, Fis family FDV78_23035 PF00158 Sigma-54 interaction domain FDV78_23040 PF02049 Flagellar hook-basal body complex protein FliE FDV78_23045 PF01514 Secretory protein of YscJ/FliF family FDV78_23045 PF08345 Flagellar M-ring protein C-terminal FDV78_23050 PF14841 FliG middle domain FDV78_23050 PF14842 FliG N-terminal domain FDV78_23050 PF01706 FliG C-terminal domain FDV78_23060 PF18269 T3SS EscN ATPase C-terminal domain FDV78_23060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_23075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_23075 PF03466 LysR substrate binding domain FDV78_23110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_23115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_23115 PF03466 LysR substrate binding domain FDV78_23145 PF00486 Transcriptional regulatory protein, C terminal FDV78_23145 PF00072 Response regulator receiver domain FDV78_23150 PF00512 His Kinase A (phospho-acceptor) domain FDV78_23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_23150 PF13426 PAS domain FDV78_23150 PF00072 Response regulator receiver domain FDV78_23150 PF08448 PAS fold FDV78_23155 PF00080 Copper/zinc superoxide dismutase (SODC) FDV78_23160 PF00266 Aminotransferase class-V FDV78_23165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_23170 PF03707 Bacterial signalling protein N terminal repeat FDV78_23170 PF00990 Diguanylate cyclase, GGDEF domain FDV78_23170 PF00563 EAL domain FDV78_23175 PF00155 Aminotransferase class I and II FDV78_23180 PF08240 Alcohol dehydrogenase GroES-like domain FDV78_23180 PF00107 Zinc-binding dehydrogenase FDV78_23215 PF00194 Eukaryotic-type carbonic anhydrase FDV78_23220 PF00924 Mechanosensitive ion channel FDV78_23230 PF01070 FMN-dependent dehydrogenase FDV78_23235 PF02652 L-lactate permease FDV78_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_23240 PF03466 LysR substrate binding domain FDV78_23245 PF00326 Prolyl oligopeptidase family FDV78_23245 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV78_23250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV78_23250 PF00005 ABC transporter FDV78_23260 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV78_23260 PF13654 AAA domain FDV78_23265 PF00672 HAMP domain FDV78_23265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_23270 PF07238 PilZ domain FDV78_23270 PF12945 Flagellar protein YcgR FDV78_23290 PF00583 Acetyltransferase (GNAT) family FDV78_23295 PF12800 4Fe-4S binding domain FDV78_23295 PF12838 4Fe-4S dicluster domain FDV78_23300 PF12801 4Fe-4S binding domain FDV78_23300 PF13237 4Fe-4S dicluster domain FDV78_23315 PF00005 ABC transporter FDV78_23315 PF12558 ATP-binding cassette cobalt transporter FDV78_23320 PF07155 ECF-type riboflavin transporter, S component FDV78_23325 PF00529 HlyD membrane-fusion protein of T1SS FDV78_23325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_23330 PF11742 Protein of unknown function (DUF3302) FDV78_23335 PF00990 Diguanylate cyclase, GGDEF domain FDV78_23350 PF01048 Phosphorylase superfamily FDV78_23360 PF08349 Protein of unknown function (DUF1722) FDV78_23365 PF13411 MerR HTH family regulatory protein FDV78_23370 PF03441 FAD binding domain of DNA photolyase FDV78_23370 PF00875 DNA photolyase FDV78_23375 PF03734 L,D-transpeptidase catalytic domain FDV78_23375 PF01476 LysM domain FDV78_23375 PF17969 L,D-transpeptidase C-terminal domain FDV78_23385 PF00271 Helicase conserved C-terminal domain FDV78_23385 PF00270 DEAD/DEAH box helicase FDV78_23390 PF00326 Prolyl oligopeptidase family FDV78_23390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV78_23395 PF07715 TonB-dependent Receptor Plug Domain FDV78_23395 PF00593 TonB dependent receptor FDV78_23415 PF00672 HAMP domain FDV78_23415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_23420 PF12849 PBP superfamily domain FDV78_23425 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_23430 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_23435 PF00005 ABC transporter FDV78_23450 PF13519 von Willebrand factor type A domain FDV78_23450 PF07584 Aerotolerance regulator N-terminal FDV78_23455 PF13519 von Willebrand factor type A domain FDV78_23465 PF01882 Protein of unknown function DUF58 FDV78_23470 PF17863 AAA lid domain FDV78_23470 PF07726 ATPase family associated with various cellular activities (AAA) FDV78_23480 PF02743 Cache domain FDV78_23480 PF00672 HAMP domain FDV78_23480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_23490 PF00196 Bacterial regulatory proteins, luxR family FDV78_23495 PF00196 Bacterial regulatory proteins, luxR family FDV78_23505 PF00005 ABC transporter FDV78_23505 PF00664 ABC transporter transmembrane region FDV78_23510 PF00529 HlyD membrane-fusion protein of T1SS FDV78_23525 PF00691 OmpA family FDV78_23525 PF01389 OmpA-like transmembrane domain FDV78_23535 PF01032 FecCD transport family FDV78_23540 PF01497 Periplasmic binding protein FDV78_23545 PF00005 ABC transporter FDV78_23550 PF00593 TonB dependent receptor FDV78_23550 PF07715 TonB-dependent Receptor Plug Domain FDV78_23555 PF00664 ABC transporter transmembrane region FDV78_23555 PF00005 ABC transporter FDV78_23560 PF00512 His Kinase A (phospho-acceptor) domain FDV78_23560 PF13493 Domain of unknown function (DUF4118) FDV78_23560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_23560 PF02702 Osmosensitive K+ channel His kinase sensor domain FDV78_23565 PF00486 Transcriptional regulatory protein, C terminal FDV78_23565 PF00072 Response regulator receiver domain FDV78_23570 PF02254 TrkA-N domain FDV78_23570 PF02080 TrkA-C domain FDV78_23575 PF02386 Cation transport protein FDV78_23580 PF00563 EAL domain FDV78_23580 PF03707 Bacterial signalling protein N terminal repeat FDV78_23580 PF00990 Diguanylate cyclase, GGDEF domain FDV78_23585 PF00127 Copper binding proteins, plastocyanin/azurin family FDV78_23590 PF13419 Haloacid dehalogenase-like hydrolase FDV78_23600 PF01238 Phosphomannose isomerase type I FDV78_23605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_23605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_23610 PF12833 Helix-turn-helix domain FDV78_23620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_23630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV78_23630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV78_23635 PF00199 Catalase FDV78_23635 PF06628 Catalase-related immune-responsive FDV78_23640 PF13417 Glutathione S-transferase, N-terminal domain FDV78_23645 PF16884 N-terminal domain of oxidoreductase FDV78_23645 PF00107 Zinc-binding dehydrogenase FDV78_23650 PF00440 Bacterial regulatory proteins, tetR family FDV78_23650 PF16925 Tetracyclin repressor-like, C-terminal domain FDV78_23685 PF00534 Glycosyl transferases group 1 FDV78_23695 PF13614 AAA domain FDV78_23695 PF13807 G-rich domain on putative tyrosine kinase FDV78_23695 PF02706 Chain length determinant protein FDV78_23710 PF02397 Bacterial sugar transferase FDV78_23715 PF08402 TOBE domain FDV78_23715 PF00005 ABC transporter FDV78_23720 PF01547 Bacterial extracellular solute-binding protein FDV78_23725 PF14785 Maltose transport system permease protein MalF P2 domain FDV78_23725 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_23730 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_23790 PF00580 UvrD/REP helicase N-terminal domain FDV78_23790 PF13361 UvrD-like helicase C-terminal domain FDV78_23795 PF01872 RibD C-terminal domain FDV78_23800 PF02909 Tetracyclin repressor-like, C-terminal domain FDV78_23800 PF00440 Bacterial regulatory proteins, tetR family FDV78_23805 PF02798 Glutathione S-transferase, N-terminal domain FDV78_23820 PF07943 Penicillin-binding protein 5, C-terminal domain FDV78_23820 PF00768 D-alanyl-D-alanine carboxypeptidase FDV78_23835 PF00462 Glutaredoxin FDV78_23835 PF08534 Redoxin FDV78_23840 PF00962 Adenosine/AMP deaminase FDV78_23860 PF00313 'Cold-shock' DNA-binding domain FDV78_23865 PF02678 Pirin FDV78_23865 PF05726 Pirin C-terminal cupin domain FDV78_23870 PF01734 Patatin-like phospholipase FDV78_23880 PF01047 MarR family FDV78_23905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDV78_23910 PF00884 Sulfatase FDV78_23910 PF08019 Phosphoethanolamine transferase EptA/EptB FDV78_23915 PF01219 Prokaryotic diacylglycerol kinase FDV78_23925 PF00512 His Kinase A (phospho-acceptor) domain FDV78_23925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_23925 PF00672 HAMP domain FDV78_23930 PF00486 Transcriptional regulatory protein, C terminal FDV78_23930 PF00072 Response regulator receiver domain FDV78_23935 PF00106 short chain dehydrogenase FDV78_23955 PF01323 DSBA-like thioredoxin domain FDV78_23970 PF00255 Glutathione peroxidase FDV78_23975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDV78_23985 PF07690 Major Facilitator Superfamily FDV78_24000 PF01966 HD domain FDV78_24010 PF07969 Amidohydrolase family FDV78_24015 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDV78_24025 PF03448 MgtE intracellular N domain FDV78_24025 PF01769 Divalent cation transporter FDV78_24025 PF00571 CBS domain FDV78_24030 PF03109 ABC1 family FDV78_24040 PF00392 Bacterial regulatory proteins, gntR family FDV78_24040 PF00155 Aminotransferase class I and II FDV78_24045 PF13520 Amino acid permease FDV78_24055 PF13404 AsnC-type helix-turn-helix domain FDV78_24055 PF01037 Lrp/AsnC ligand binding domain FDV78_24060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_24060 PF03466 LysR substrate binding domain FDV78_24075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV78_24075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV78_24080 PF01627 Hpt domain FDV78_24080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_24080 PF00512 His Kinase A (phospho-acceptor) domain FDV78_24080 PF00072 Response regulator receiver domain FDV78_24080 PF00672 HAMP domain FDV78_24080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV78_24085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDV78_24090 PF01554 MatE FDV78_24095 PF04363 Protein of unknown function (DUF496) FDV78_24110 PF04337 Protein of unknown function, DUF480 FDV78_24115 PF01541 GIY-YIG catalytic domain FDV78_24120 PF13407 Periplasmic binding protein domain FDV78_24125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_24125 PF00512 His Kinase A (phospho-acceptor) domain FDV78_24125 PF09308 LuxQ, periplasmic FDV78_24125 PF00072 Response regulator receiver domain FDV78_24135 PF00529 HlyD membrane-fusion protein of T1SS FDV78_24135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_24155 PF01037 Lrp/AsnC ligand binding domain FDV78_24185 PF07549 SecD/SecF GG Motif FDV78_24185 PF13721 SecD export protein N-terminal TM region FDV78_24185 PF02355 Protein export membrane protein FDV78_24190 PF02355 Protein export membrane protein FDV78_24190 PF07549 SecD/SecF GG Motif FDV78_24205 PF00106 short chain dehydrogenase FDV78_24210 PF00108 Thiolase, N-terminal domain FDV78_24210 PF02803 Thiolase, C-terminal domain FDV78_24220 PF00561 alpha/beta hydrolase fold FDV78_24220 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FDV78_24230 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV78_24235 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FDV78_24240 PF00384 Molybdopterin oxidoreductase FDV78_24240 PF01568 Molydopterin dinucleotide binding domain FDV78_24240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_24250 PF13187 4Fe-4S dicluster domain FDV78_24250 PF12838 4Fe-4S dicluster domain FDV78_24255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDV78_24255 PF07730 Histidine kinase FDV78_24255 PF00672 HAMP domain FDV78_24255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_24260 PF00196 Bacterial regulatory proteins, luxR family FDV78_24260 PF00072 Response regulator receiver domain FDV78_24275 PF07687 Peptidase dimerisation domain FDV78_24275 PF01546 Peptidase family M20/M25/M40 FDV78_24280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV78_24285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_24290 PF00873 AcrB/AcrD/AcrF family FDV78_24295 PF12729 Four helix bundle sensory module for signal transduction FDV78_24295 PF00672 HAMP domain FDV78_24295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_24300 PF00472 RF-1 domain FDV78_24305 PF13419 Haloacid dehalogenase-like hydrolase FDV78_24310 PF01389 OmpA-like transmembrane domain FDV78_24310 PF00691 OmpA family FDV78_24320 PF00793 DAHP synthetase I family FDV78_24325 PF07690 Major Facilitator Superfamily FDV78_24335 PF08447 PAS fold FDV78_24335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_24340 PF02779 Transketolase, pyrimidine binding domain FDV78_24340 PF02780 Transketolase, C-terminal domain FDV78_24340 PF00456 Transketolase, thiamine diphosphate binding domain FDV78_24345 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDV78_24365 PF00704 Glycosyl hydrolases family 18 FDV78_24365 PF08329 Chitinase A, N-terminal domain FDV78_24375 PF00990 Diguanylate cyclase, GGDEF domain FDV78_24375 PF00563 EAL domain FDV78_24375 PF03707 Bacterial signalling protein N terminal repeat FDV78_24380 PF00581 Rhodanese-like domain FDV78_24400 PF00899 ThiF family FDV78_24405 PF03453 MoeA N-terminal region (domain I and II) FDV78_24405 PF03454 MoeA C-terminal region (domain IV) FDV78_24405 PF00994 Probable molybdopterin binding domain FDV78_24410 PF01227 GTP cyclohydrolase I FDV78_24415 PF01566 Natural resistance-associated macrophage protein FDV78_24425 PF00654 Voltage gated chloride channel FDV78_24440 PF00248 Aldo/keto reductase family FDV78_24445 PF00072 Response regulator receiver domain FDV78_24455 PF03853 YjeF-related protein N-terminus FDV78_24455 PF01256 Carbohydrate kinase FDV78_24460 PF00478 IMP dehydrogenase / GMP reductase domain FDV78_24470 PF00158 Sigma-54 interaction domain FDV78_24470 PF00072 Response regulator receiver domain FDV78_24470 PF02954 Bacterial regulatory protein, Fis family FDV78_24475 PF08463 EcoEI R protein C-terminal FDV78_24475 PF04851 Type III restriction enzyme, res subunit FDV78_24475 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDV78_24475 PF00271 Helicase conserved C-terminal domain FDV78_24480 PF12161 HsdM N-terminal domain FDV78_24480 PF02384 N-6 DNA Methylase FDV78_24515 PF00069 Protein kinase domain FDV78_24550 PF13193 AMP-binding enzyme C-terminal domain FDV78_24550 PF00501 AMP-binding enzyme FDV78_24555 PF00766 Electron transfer flavoprotein FAD-binding domain FDV78_24555 PF01012 Electron transfer flavoprotein domain FDV78_24560 PF01012 Electron transfer flavoprotein domain FDV78_24575 PF00005 ABC transporter FDV78_24575 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDV78_24600 PF00005 ABC transporter FDV78_24605 PF00501 AMP-binding enzyme FDV78_24605 PF14535 AMP-binding enzyme C-terminal domain FDV78_24610 PF05724 Thiopurine S-methyltransferase (TPMT) FDV78_24620 PF00034 Cytochrome c FDV78_24630 PF13411 MerR HTH family regulatory protein FDV78_24635 PF02627 Carboxymuconolactone decarboxylase family FDV78_24640 PF02567 Phenazine biosynthesis-like protein FDV78_24650 PF02322 Cytochrome bd terminal oxidase subunit II FDV78_24655 PF01654 Cytochrome bd terminal oxidase subunit I FDV78_24660 PF00155 Aminotransferase class I and II FDV78_24660 PF00392 Bacterial regulatory proteins, gntR family FDV78_24665 PF14602 Hexapeptide repeat of succinyl-transferase FDV78_24665 PF12464 Maltose acetyltransferase FDV78_24675 PF00924 Mechanosensitive ion channel FDV78_24675 PF12795 Mechanosensitive ion channel porin domain FDV78_24675 PF12794 Mechanosensitive ion channel inner membrane domain 1 FDV78_24690 PF01627 Hpt domain FDV78_24690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV78_24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_24690 PF00072 Response regulator receiver domain FDV78_24690 PF00512 His Kinase A (phospho-acceptor) domain FDV78_24690 PF00672 HAMP domain FDV78_24695 PF00682 HMGL-like FDV78_24700 PF02785 Biotin carboxylase C-terminal domain FDV78_24700 PF00289 Biotin carboxylase, N-terminal domain FDV78_24700 PF00364 Biotin-requiring enzyme FDV78_24700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV78_24705 PF00378 Enoyl-CoA hydratase/isomerase FDV78_24710 PF01039 Carboxyl transferase domain FDV78_24715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_24715 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_24715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_24720 PF09278 MerR, DNA binding FDV78_24720 PF00376 MerR family regulatory protein FDV78_24725 PF02803 Thiolase, C-terminal domain FDV78_24725 PF00108 Thiolase, N-terminal domain FDV78_24730 PF00171 Aldehyde dehydrogenase family FDV78_24735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV78_24735 PF02770 Acyl-CoA dehydrogenase, middle domain FDV78_24735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV78_24740 PF00378 Enoyl-CoA hydratase/isomerase FDV78_24750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV78_24750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV78_24765 PF17151 Periplasmic sensor domain FDV78_24765 PF00990 Diguanylate cyclase, GGDEF domain FDV78_24770 PF00440 Bacterial regulatory proteins, tetR family FDV78_24770 PF13977 BetI-type transcriptional repressor, C-terminal FDV78_24775 PF00171 Aldehyde dehydrogenase family FDV78_24780 PF05199 GMC oxidoreductase FDV78_24780 PF00732 GMC oxidoreductase FDV78_24785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDV78_24790 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_24795 PF00571 CBS domain FDV78_24795 PF00005 ABC transporter FDV78_24800 PF00881 Nitroreductase family FDV78_24810 PF16200 C-terminal region of band_7 FDV78_24810 PF01145 SPFH domain / Band 7 family FDV78_24820 PF13188 PAS domain FDV78_24820 PF03707 Bacterial signalling protein N terminal repeat FDV78_24820 PF00990 Diguanylate cyclase, GGDEF domain FDV78_24820 PF00563 EAL domain FDV78_24835 PF00034 Cytochrome c FDV78_24835 PF03150 Di-haem cytochrome c peroxidase FDV78_24840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_24840 PF00512 His Kinase A (phospho-acceptor) domain FDV78_24840 PF09308 LuxQ, periplasmic FDV78_24840 PF00072 Response regulator receiver domain FDV78_24855 PF04116 Fatty acid hydroxylase superfamily FDV78_24900 PF01048 Phosphorylase superfamily FDV78_24905 PF00990 Diguanylate cyclase, GGDEF domain FDV78_24905 PF00563 EAL domain FDV78_24910 PF05025 RbsD / FucU transport protein family FDV78_24915 PF00005 ABC transporter FDV78_24920 PF02653 Branched-chain amino acid transport system / permease component FDV78_24925 PF13407 Periplasmic binding protein domain FDV78_24930 PF00294 pfkB family carbohydrate kinase FDV78_24935 PF00356 Bacterial regulatory proteins, lacI family FDV78_24945 PF04973 Nicotinamide mononucleotide transporter FDV78_24950 PF01048 Phosphorylase superfamily FDV78_24970 PF00072 Response regulator receiver domain FDV78_24970 PF00486 Transcriptional regulatory protein, C terminal FDV78_24985 PF00245 Alkaline phosphatase FDV78_24995 PF01483 Proprotein convertase P-domain FDV78_24995 PF00082 Subtilase family FDV78_25005 PF00990 Diguanylate cyclase, GGDEF domain FDV78_25005 PF00072 Response regulator receiver domain FDV78_25015 PF03222 Tryptophan/tyrosine permease family FDV78_25020 PF00583 Acetyltransferase (GNAT) family FDV78_25025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV78_25025 PF00384 Molybdopterin oxidoreductase FDV78_25025 PF01568 Molydopterin dinucleotide binding domain FDV78_25030 PF10414 Sirohaem synthase dimerisation region FDV78_25030 PF14824 Sirohaem biosynthesis protein central FDV78_25030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV78_25035 PF00591 Glycosyl transferase family, a/b domain FDV78_25035 PF02885 Glycosyl transferase family, helical bundle domain FDV78_25045 PF01738 Dienelactone hydrolase family FDV78_25050 PF03861 ANTAR domain FDV78_25050 PF08376 Nitrate and nitrite sensing FDV78_25065 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_25070 PF00005 ABC transporter FDV78_25075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV78_25075 PF04324 BFD-like [2Fe-2S] binding domain FDV78_25075 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDV78_25075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV78_25075 PF13806 Rieske-like [2Fe-2S] domain FDV78_25075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_25090 PF00440 Bacterial regulatory proteins, tetR family FDV78_25090 PF08361 MAATS-type transcriptional repressor, C-terminal region FDV78_25100 PF01610 Transposase FDV78_25100 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_25100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_25110 PF00072 Response regulator receiver domain FDV78_25110 PF00211 Adenylate and Guanylate cyclase catalytic domain FDV78_25135 PF03793 PASTA domain FDV78_25135 PF00069 Protein kinase domain FDV78_25160 PF00691 OmpA family FDV78_25160 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDV78_25220 PF07724 AAA domain (Cdc48 subfamily) FDV78_25220 PF10431 C-terminal, D2-small domain, of ClpB protein FDV78_25220 PF00004 ATPase family associated with various cellular activities (AAA) FDV78_25220 PF17871 AAA lid domain FDV78_25230 PF04717 Type VI secretion system, phage-baseplate injector FDV78_25230 PF16671 Actin cross-linking domain FDV78_25245 PF00149 Calcineurin-like phosphoesterase FDV78_25245 PF12320 Type 5 capsule protein repressor C-terminal domain FDV78_25250 PF13476 AAA domain FDV78_25270 PF08212 Lipocalin-like domain FDV78_25280 PF07690 Major Facilitator Superfamily FDV78_25290 PF03606 C4-dicarboxylate anaerobic carrier FDV78_25300 PF00034 Cytochrome c FDV78_25305 PF01212 Beta-eliminating lyase FDV78_25315 PF12592 Protein of unknown function (DUF3763) FDV78_25315 PF17868 AAA lid domain FDV78_25315 PF07728 AAA domain (dynein-related subfamily) FDV78_25320 PF05762 VWA domain containing CoxE-like protein FDV78_25340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_25340 PF03466 LysR substrate binding domain FDV78_25345 PF09330 D-lactate dehydrogenase, membrane binding FDV78_25345 PF01565 FAD binding domain FDV78_25365 PF01168 Alanine racemase, N-terminal domain FDV78_25365 PF00842 Alanine racemase, C-terminal domain FDV78_25370 PF00672 HAMP domain FDV78_25370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_25385 PF09154 Domain of unknown function (DUF1939) FDV78_25385 PF00128 Alpha amylase, catalytic domain FDV78_25410 PF06965 Na+/H+ antiporter 1 FDV78_25410 PF13462 Thioredoxin FDV78_25455 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV78_25455 PF14760 Rnk N-terminus FDV78_25460 PF04324 BFD-like [2Fe-2S] binding domain FDV78_25460 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDV78_25460 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_25460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV78_25460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV78_25465 PF13806 Rieske-like [2Fe-2S] domain FDV78_25470 PF01226 Formate/nitrite transporter FDV78_25475 PF14824 Sirohaem biosynthesis protein central FDV78_25475 PF10414 Sirohaem synthase dimerisation region FDV78_25475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV78_25490 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDV78_25505 PF00593 TonB dependent receptor FDV78_25505 PF07715 TonB-dependent Receptor Plug Domain FDV78_25520 PF11756 Nitrous oxide-stimulated promoter FDV78_25530 PF07494 Two component regulator propeller FDV78_25530 PF12833 Helix-turn-helix domain FDV78_25530 PF00072 Response regulator receiver domain FDV78_25530 PF07495 Y_Y_Y domain FDV78_25530 PF00512 His Kinase A (phospho-acceptor) domain FDV78_25530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_25535 PF07690 Major Facilitator Superfamily FDV78_25540 PF00085 Thioredoxin FDV78_25545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDV78_25545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDV78_25565 PF01238 Phosphomannose isomerase type I FDV78_25570 PF07690 Major Facilitator Superfamily FDV78_25575 PF05231 MASE1 FDV78_25575 PF07730 Histidine kinase FDV78_25575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_25580 PF00072 Response regulator receiver domain FDV78_25580 PF00196 Bacterial regulatory proteins, luxR family FDV78_25585 PF07690 Major Facilitator Superfamily FDV78_25590 PF02634 FdhD/NarQ family FDV78_25595 PF03466 LysR substrate binding domain FDV78_25595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_25605 PF00384 Molybdopterin oxidoreductase FDV78_25610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV78_25610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV78_25625 PF04143 Sulphur transport FDV78_25635 PF00873 AcrB/AcrD/AcrF family FDV78_25640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV78_25650 PF03477 ATP cone domain FDV78_25650 PF13597 Anaerobic ribonucleoside-triphosphate reductase FDV78_25655 PF13597 Anaerobic ribonucleoside-triphosphate reductase FDV78_25655 PF03477 ATP cone domain FDV78_25720 PF13538 UvrD-like helicase C-terminal domain FDV78_25740 PF00589 Phage integrase family FDV78_25740 PF02899 Phage integrase, N-terminal SAM-like domain FDV78_25755 PF01554 MatE FDV78_25765 PF12833 Helix-turn-helix domain FDV78_25770 PF00155 Aminotransferase class I and II FDV78_25775 PF08443 RimK-like ATP-grasp domain FDV78_25775 PF18030 RimK PreATP-grasp domain FDV78_25785 PF04076 Bacterial OB fold (BOF) protein FDV78_25790 PF07685 CobB/CobQ-like glutamine amidotransferase domain FDV78_25800 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_25805 PF03459 TOBE domain FDV78_25805 PF00005 ABC transporter FDV78_25815 PF01590 GAF domain FDV78_25815 PF00563 EAL domain FDV78_25815 PF00990 Diguanylate cyclase, GGDEF domain FDV78_25815 PF00360 Phytochrome region FDV78_25825 PF00990 Diguanylate cyclase, GGDEF domain FDV78_25825 PF00072 Response regulator receiver domain FDV78_25840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDV78_25840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDV78_25840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDV78_25845 PF02233 NAD(P) transhydrogenase beta subunit FDV78_25855 PF00486 Transcriptional regulatory protein, C terminal FDV78_25855 PF00072 Response regulator receiver domain FDV78_25870 PF03701 Uncharacterised protein family (UPF0181) FDV78_25875 PF13542 Helix-turn-helix domain of transposase family ISL3 FDV78_25875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FDV78_25875 PF01610 Transposase FDV78_25880 PF00582 Universal stress protein family FDV78_25890 PF03466 LysR substrate binding domain FDV78_25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_25910 PF01253 Translation initiation factor SUI1 FDV78_25920 PF07478 D-ala D-ala ligase C-terminus FDV78_25920 PF01820 D-ala D-ala ligase N-terminus FDV78_25930 PF00583 Acetyltransferase (GNAT) family FDV78_25930 PF13380 CoA binding domain FDV78_25930 PF13607 Succinyl-CoA ligase like flavodoxin domain FDV78_25935 PF03466 LysR substrate binding domain FDV78_25935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_25940 PF07715 TonB-dependent Receptor Plug Domain FDV78_25940 PF00593 TonB dependent receptor FDV78_25950 PF16363 GDP-mannose 4,6 dehydratase FDV78_25955 PF05231 MASE1 FDV78_25955 PF08448 PAS fold FDV78_25955 PF13426 PAS domain FDV78_25955 PF08447 PAS fold FDV78_25955 PF00563 EAL domain FDV78_25955 PF00990 Diguanylate cyclase, GGDEF domain FDV78_25960 PF03746 LamB/YcsF family FDV78_25965 PF02682 Carboxyltransferase domain, subdomain C and D FDV78_25970 PF02626 Carboxyltransferase domain, subdomain A and B FDV78_25975 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDV78_25975 PF01266 FAD dependent oxidoreductase FDV78_25985 PF00005 ABC transporter FDV78_25990 PF13472 GDSL-like Lipase/Acylhydrolase family FDV78_25995 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDV78_25995 PF07055 Enoyl reductase FAD binding domain FDV78_25995 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDV78_26000 PF13188 PAS domain FDV78_26000 PF03707 Bacterial signalling protein N terminal repeat FDV78_26000 PF00563 EAL domain FDV78_26000 PF00990 Diguanylate cyclase, GGDEF domain FDV78_26010 PF00226 DnaJ domain FDV78_26010 PF01556 DnaJ C terminal domain FDV78_26010 PF00684 DnaJ central domain FDV78_26035 PF12793 Sugar transport-related sRNA regulator N-term FDV78_26035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV78_26045 PF03061 Thioesterase superfamily FDV78_26060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV78_26065 PF12262 Bacterial virulence factor lipase N-terminal FDV78_26080 PF03741 Integral membrane protein TerC family FDV78_26085 PF00149 Calcineurin-like phosphoesterase FDV78_26085 PF02872 5'-nucleotidase, C-terminal domain FDV78_26090 PF11398 Protein of unknown function (DUF2813) FDV78_26095 PF06496 Protein of unknown function (DUF1097) FDV78_26100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_26100 PF03466 LysR substrate binding domain FDV78_26105 PF01226 Formate/nitrite transporter FDV78_26110 PF04264 YceI-like domain FDV78_26115 PF01292 Prokaryotic cytochrome b561 FDV78_26125 PF12792 CSS motif domain associated with EAL FDV78_26125 PF00563 EAL domain FDV78_26130 PF00271 Helicase conserved C-terminal domain FDV78_26130 PF00270 DEAD/DEAH box helicase FDV78_26135 PF04336 Acyl carrier protein phosphodiesterase FDV78_26145 PF00672 HAMP domain FDV78_26145 PF17200 Single Cache domain 2 FDV78_26145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_26155 PF13419 Haloacid dehalogenase-like hydrolase FDV78_26165 PF11849 Domain of unknown function (DUF3369) FDV78_26185 PF00294 pfkB family carbohydrate kinase FDV78_26190 PF01268 Formate--tetrahydrofolate ligase FDV78_26195 PF00483 Nucleotidyl transferase FDV78_26200 PF06483 Chitinase C FDV78_26200 PF00704 Glycosyl hydrolases family 18 FDV78_26210 PF06719 AraC-type transcriptional regulator N-terminus FDV78_26210 PF12833 Helix-turn-helix domain FDV78_26215 PF00465 Iron-containing alcohol dehydrogenase FDV78_26225 PF14532 Sigma-54 interaction domain FDV78_26225 PF02954 Bacterial regulatory protein, Fis family FDV78_26225 PF00072 Response regulator receiver domain FDV78_26230 PF00672 HAMP domain FDV78_26230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_26230 PF00512 His Kinase A (phospho-acceptor) domain FDV78_26240 PF07690 Major Facilitator Superfamily FDV78_26245 PF02887 Pyruvate kinase, alpha/beta domain FDV78_26245 PF00224 Pyruvate kinase, barrel domain FDV78_26250 PF00005 ABC transporter FDV78_26255 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_26260 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV78_26265 PF00528 Binding-protein-dependent transport system inner membrane component FDV78_26270 PF00563 EAL domain FDV78_26270 PF00990 Diguanylate cyclase, GGDEF domain FDV78_26270 PF00989 PAS fold FDV78_26270 PF01590 GAF domain FDV78_26290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV78_26290 PF00356 Bacterial regulatory proteins, lacI family FDV78_26295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV78_26295 PF00381 PTS HPr component phosphorylation site FDV78_26300 PF00294 pfkB family carbohydrate kinase FDV78_26305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV78_26305 PF02378 Phosphotransferase system, EIIC FDV78_26315 PF00873 AcrB/AcrD/AcrF family FDV78_26335 PF01571 Aminomethyltransferase folate-binding domain FDV78_26335 PF08669 Glycine cleavage T-protein C-terminal barrel domain FDV78_26345 PF00464 Serine hydroxymethyltransferase FDV78_26350 PF01597 Glycine cleavage H-protein FDV78_26355 PF02347 Glycine cleavage system P-protein FDV78_26390 PF01039 Carboxyl transferase domain FDV78_26390 PF17848 Acetyl-coA carboxylase zinc finger domain FDV78_26395 PF03466 LysR substrate binding domain FDV78_26395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_26400 PF11490 DNA polymerase III polC-type N-terminus II FDV78_26400 PF00929 Exonuclease FDV78_26400 PF02811 PHP domain FDV78_26400 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV78_26400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV78_26400 PF14579 Helix-hairpin-helix motif FDV78_26405 PF00664 ABC transporter transmembrane region FDV78_26405 PF00005 ABC transporter FDV78_26425 PF02253 Phospholipase A1 FDV78_26440 PF00376 MerR family regulatory protein FDV78_26440 PF09278 MerR, DNA binding FDV78_26445 PF01327 Polypeptide deformylase FDV78_26465 PF01769 Divalent cation transporter FDV78_26465 PF00571 CBS domain FDV78_26465 PF03448 MgtE intracellular N domain FDV78_26485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV78_26490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV78_26500 PF01757 Acyltransferase family FDV78_26510 PF09722 Protein of unknown function (DUF2384) FDV78_26515 PF00141 Peroxidase FDV78_26525 PF13187 4Fe-4S dicluster domain FDV78_26525 PF01645 Conserved region in glutamate synthase FDV78_26535 PF12431 Transcriptional regulator FDV78_26535 PF00072 Response regulator receiver domain FDV78_26540 PF00989 PAS fold FDV78_26540 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDV78_26540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_26540 PF17203 Single cache domain 3 FDV78_26545 PF00939 Sodium:sulfate symporter transmembrane region FDV78_26550 PF00171 Aldehyde dehydrogenase family FDV78_26570 PF00892 EamA-like transporter family FDV78_26575 PF00893 Small Multidrug Resistance protein FDV78_26580 PF02868 Thermolysin metallopeptidase, alpha-helical domain FDV78_26580 PF04151 Bacterial pre-peptidase C-terminal domain FDV78_26580 PF07504 Fungalysin/Thermolysin Propeptide Motif FDV78_26580 PF01447 Thermolysin metallopeptidase, catalytic domain FDV78_26580 PF03413 Peptidase propeptide and YPEB domain FDV78_26590 PF01569 PAP2 superfamily FDV78_26605 PF00892 EamA-like transporter family FDV78_26625 PF00072 Response regulator receiver domain FDV78_26625 PF01584 CheW-like domain FDV78_26650 PF00196 Bacterial regulatory proteins, luxR family FDV78_26650 PF00072 Response regulator receiver domain FDV78_26660 PF00990 Diguanylate cyclase, GGDEF domain FDV78_26665 PF00196 Bacterial regulatory proteins, luxR family FDV78_26665 PF00072 Response regulator receiver domain FDV78_26670 PF00990 Diguanylate cyclase, GGDEF domain FDV78_26670 PF13188 PAS domain FDV78_26670 PF00563 EAL domain FDV78_26670 PF03707 Bacterial signalling protein N terminal repeat FDV78_26675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV78_26675 PF00072 Response regulator receiver domain FDV78_26675 PF00512 His Kinase A (phospho-acceptor) domain FDV78_26675 PF09456 RcsC Alpha-Beta-Loop (ABL) FDV78_26685 PF03466 LysR substrate binding domain FDV78_26685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_26700 PF00691 OmpA family FDV78_26700 PF05736 OprF membrane domain FDV78_26735 PF00437 Type II/IV secretion system protein FDV78_26750 PF13629 Pilus formation protein N terminal region FDV78_26750 PF00263 Bacterial type II and III secretion system protein FDV78_26750 PF04972 BON domain FDV78_26770 PF03466 LysR substrate binding domain FDV78_26770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV78_26775 PF12833 Helix-turn-helix domain FDV78_26785 PF08453 Peptidase family M9 N-terminal FDV78_26785 PF04151 Bacterial pre-peptidase C-terminal domain FDV78_26785 PF01752 Collagenase FDV78_26795 PF13356 Arm DNA-binding domain FDV78_26795 PF00589 Phage integrase family FDV78_26820 PF00293 NUDIX domain FDV78_26850 PF00149 Calcineurin-like phosphoesterase FDV78_26850 PF02872 5'-nucleotidase, C-terminal domain FDV78_26855 PF00480 ROK family FDV78_26865 PF00083 Sugar (and other) transporter FDV78_26870 PF13181 Tetratricopeptide repeat FDV78_26870 PF17128 Domain of unknown function (DUF5107) FDV78_26915 PF00486 Transcriptional regulatory protein, C terminal FDV78_26915 PF18500 CadC C-terminal domain 1 FDV78_26925 PF00563 EAL domain FDV78_26925 PF12792 CSS motif domain associated with EAL FDV78_26930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_26940 PF17200 Single Cache domain 2 FDV78_26940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_26940 PF00672 HAMP domain FDV78_26960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV78_26960 PF08447 PAS fold FDV78_26960 PF13426 PAS domain FDV78_26970 PF07434 CblD like pilus biogenesis initiator FDV78_27100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV78_27100 PF18269 T3SS EscN ATPase C-terminal domain FDV78_27100 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV78_27105 PF03958 Bacterial type II/III secretion system short domain FDV78_27105 PF00263 Bacterial type II and III secretion system protein FDV78_27120 PF00813 FliP family FDV78_27135 PF00486 Transcriptional regulatory protein, C terminal FDV78_27165 PF01312 FlhB HrpN YscU SpaS Family FDV78_27170 PF00771 FHIPEP family FDV78_27250 PF01548 Transposase FDV78_27250 PF02371 Transposase IS116/IS110/IS902 family FDV78_27335 PF00455 DeoR C terminal sensor domain FDV78_27335 PF08220 DeoR-like helix-turn-helix domain FDV78_27340 PF07690 Major Facilitator Superfamily FDV78_27345 PF07882 L-fucose isomerase, second N-terminal domain FDV78_27345 PF07881 L-fucose isomerase, first N-terminal domain FDV78_27345 PF02952 L-fucose isomerase, C-terminal domain FDV78_27350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDV78_27350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDV78_27355 PF05025 RbsD / FucU transport protein family FDV78_27360 PF00596 Class II Aldolase and Adducin N-terminal domain FDV78_27365 PF00465 Iron-containing alcohol dehydrogenase FDV78_27375 PF04002 RadC-like JAB domain