locus-tag class description FDV79_00010 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDV79_00015 PF02683 Cytochrome C biogenesis protein transmembrane region FDV79_00015 PF11412 Disulphide bond corrector protein DsbC FDV79_00020 PF00196 Bacterial regulatory proteins, luxR family FDV79_00020 PF00072 Response regulator receiver domain FDV79_00025 PF03471 Transporter associated domain FDV79_00025 PF00999 Sodium/hydrogen exchanger family FDV79_00025 PF02080 TrkA-C domain FDV79_00035 PF00474 Sodium:solute symporter family FDV79_00055 PF00206 Lyase FDV79_00055 PF10415 Fumarase C C-terminus FDV79_00060 PF00072 Response regulator receiver domain FDV79_00060 PF01627 Hpt domain FDV79_00060 PF00512 His Kinase A (phospho-acceptor) domain FDV79_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_00060 PF00672 HAMP domain FDV79_00065 PF12832 MFS_1 like family FDV79_00080 PF16177 Acetyl-coenzyme A synthetase N-terminus FDV79_00080 PF00501 AMP-binding enzyme FDV79_00080 PF13193 AMP-binding enzyme C-terminal domain FDV79_00085 PF01220 Dehydroquinase class II FDV79_00090 PF00364 Biotin-requiring enzyme FDV79_00095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV79_00095 PF00289 Biotin carboxylase, N-terminal domain FDV79_00095 PF02785 Biotin carboxylase C-terminal domain FDV79_00110 PF01207 Dihydrouridine synthase (Dus) FDV79_00115 PF02954 Bacterial regulatory protein, Fis family FDV79_00120 PF07690 Major Facilitator Superfamily FDV79_00125 PF12848 ABC transporter FDV79_00125 PF00005 ABC transporter FDV79_00130 PF05230 MASE2 domain FDV79_00130 PF00990 Diguanylate cyclase, GGDEF domain FDV79_00145 PF13358 DDE superfamily endonuclease FDV79_00235 PF01276 Orn/Lys/Arg decarboxylase, major domain FDV79_00235 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDV79_00235 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDV79_00240 PF13520 Amino acid permease FDV79_00250 PF00486 Transcriptional regulatory protein, C terminal FDV79_00250 PF18500 CadC C-terminal domain 1 FDV79_00255 PF13411 MerR HTH family regulatory protein FDV79_00265 PF02142 MGS-like domain FDV79_00265 PF01808 AICARFT/IMPCHase bienzyme FDV79_00275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDV79_00275 PF02843 Phosphoribosylglycinamide synthetase, C domain FDV79_00275 PF02844 Phosphoribosylglycinamide synthetase, N domain FDV79_00285 PF00216 Bacterial DNA-binding protein FDV79_00290 PF00571 CBS domain FDV79_00290 PF01595 Cyclin M transmembrane N-terminal domain FDV79_00295 PF04222 Protein of unknown function (DUF416) FDV79_00300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV79_00305 PF03167 Uracil DNA glycosylase superfamily FDV79_00310 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDV79_00325 PF09297 NADH pyrophosphatase zinc ribbon domain FDV79_00325 PF00293 NUDIX domain FDV79_00330 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FDV79_00335 PF04997 RNA polymerase Rpb1, domain 1 FDV79_00335 PF00623 RNA polymerase Rpb1, domain 2 FDV79_00335 PF04998 RNA polymerase Rpb1, domain 5 FDV79_00335 PF04983 RNA polymerase Rpb1, domain 3 FDV79_00335 PF05000 RNA polymerase Rpb1, domain 4 FDV79_00340 PF00562 RNA polymerase Rpb2, domain 6 FDV79_00340 PF10385 RNA polymerase beta subunit external 1 domain FDV79_00340 PF04565 RNA polymerase Rpb2, domain 3 FDV79_00340 PF04560 RNA polymerase Rpb2, domain 7 FDV79_00340 PF04561 RNA polymerase Rpb2, domain 2 FDV79_00340 PF04563 RNA polymerase beta subunit FDV79_00345 PF00542 Ribosomal protein L7/L12 C-terminal domain FDV79_00345 PF16320 Ribosomal protein L7/L12 dimerisation domain FDV79_00350 PF00466 Ribosomal protein L10 FDV79_00355 PF00687 Ribosomal protein L1p/L10e family FDV79_00360 PF03946 Ribosomal protein L11, N-terminal domain FDV79_00360 PF00298 Ribosomal protein L11, RNA binding domain FDV79_00365 PF02357 Transcription termination factor nusG FDV79_00365 PF00467 KOW motif FDV79_00370 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDV79_00380 PF00009 Elongation factor Tu GTP binding domain FDV79_00380 PF03143 Elongation factor Tu C-terminal domain FDV79_00380 PF03144 Elongation factor Tu domain 2 FDV79_00405 PF00485 Phosphoribulokinase / Uridine kinase family FDV79_00410 PF03099 Biotin/lipoate A/B protein ligase family FDV79_00410 PF08279 HTH domain FDV79_00410 PF02237 Biotin protein ligase C terminal domain FDV79_00415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDV79_00415 PF01565 FAD binding domain FDV79_00425 PF13091 PLD-like domain FDV79_00455 PF01177 Asp/Glu/Hydantoin racemase FDV79_00465 PF07715 TonB-dependent Receptor Plug Domain FDV79_00465 PF00593 TonB dependent receptor FDV79_00470 PF05958 tRNA (Uracil-5-)-methyltransferase FDV79_00480 PF00440 Bacterial regulatory proteins, tetR family FDV79_00485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV79_00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_00490 PF01554 MatE FDV79_00495 PF04072 Leucine carboxyl methyltransferase FDV79_00500 PF01726 LexA DNA binding domain FDV79_00500 PF00717 Peptidase S24-like FDV79_00515 PF01553 Acyltransferase FDV79_00520 PF01040 UbiA prenyltransferase family FDV79_00525 PF04345 Chorismate lyase FDV79_00530 PF03748 Flagellar basal body-associated protein FliL FDV79_00535 PF01694 Rhomboid family FDV79_00535 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FDV79_00540 PF00581 Rhodanese-like domain FDV79_00550 PF04542 Sigma-70 region 2 FDV79_00550 PF04545 Sigma-70, region 4 FDV79_00550 PF00140 Sigma-70 factor, region 1.2 FDV79_00555 PF18075 FtsX extracellular domain FDV79_00560 PF00005 ABC transporter FDV79_00565 PF02881 SRP54-type protein, helical bundle domain FDV79_00565 PF00448 SRP54-type protein, GTPase domain FDV79_00580 PF01914 MarC family integral membrane protein FDV79_00635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV79_00635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV79_00640 PF01022 Bacterial regulatory protein, arsR family FDV79_00645 PF08668 HDOD domain FDV79_00645 PF00563 EAL domain FDV79_00650 PF01810 LysE type translocator FDV79_00655 PF12146 Serine aminopeptidase, S33 FDV79_00685 PF00563 EAL domain FDV79_00685 PF08495 FIST N domain FDV79_00685 PF10442 FIST C domain FDV79_00685 PF00990 Diguanylate cyclase, GGDEF domain FDV79_00690 PF13419 Haloacid dehalogenase-like hydrolase FDV79_00695 PF02899 Phage integrase, N-terminal SAM-like domain FDV79_00695 PF00589 Phage integrase family FDV79_00705 PF01678 Diaminopimelate epimerase FDV79_00710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV79_00710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV79_00720 PF01491 Frataxin-like domain FDV79_00725 PF12633 Adenylate cyclase NT domain FDV79_00725 PF01295 Adenylate cyclase, class-I FDV79_00730 PF03900 Porphobilinogen deaminase, C-terminal domain FDV79_00730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDV79_00735 PF02602 Uroporphyrinogen-III synthase HemD FDV79_00740 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FDV79_00745 PF07219 HemY protein N-terminus FDV79_00795 PF00175 Oxidoreductase NAD-binding domain FDV79_00800 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_00805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FDV79_00820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_00820 PF07498 Rho termination factor, N-terminal domain FDV79_00820 PF07497 Rho termination factor, RNA-binding domain FDV79_00825 PF00085 Thioredoxin FDV79_00830 PF00270 DEAD/DEAH box helicase FDV79_00830 PF00271 Helicase conserved C-terminal domain FDV79_00835 PF02541 Ppx/GppA phosphatase family FDV79_00840 PF02592 Putative vitamin uptake transporter FDV79_00855 PF09382 RQC domain FDV79_00855 PF00570 HRDC domain FDV79_00855 PF00271 Helicase conserved C-terminal domain FDV79_00855 PF00270 DEAD/DEAH box helicase FDV79_00855 PF16124 RecQ zinc-binding FDV79_00860 PF00892 EamA-like transporter family FDV79_00870 PF01810 LysE type translocator FDV79_00885 PF13361 UvrD-like helicase C-terminal domain FDV79_00885 PF00580 UvrD/REP helicase N-terminal domain FDV79_00895 PF05114 Protein of unknown function (DUF692) FDV79_00915 PF07690 Major Facilitator Superfamily FDV79_00920 PF03466 LysR substrate binding domain FDV79_00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_00925 PF01321 Creatinase/Prolidase N-terminal domain FDV79_00925 PF00557 Metallopeptidase family M24 FDV79_00925 PF00557 Metallopeptidase family M24 FDV79_00925 PF01321 Creatinase/Prolidase N-terminal domain FDV79_00930 PF04055 Radical SAM superfamily FDV79_00930 PF06968 Biotin and Thiamin Synthesis associated domain FDV79_00935 PF05690 Thiazole biosynthesis protein ThiG FDV79_00940 PF02597 ThiS family FDV79_00945 PF00899 ThiF family FDV79_00950 PF02581 Thiamine monophosphate synthase FDV79_00955 PF01964 Radical SAM ThiC family FDV79_00955 PF13667 ThiC-associated domain FDV79_00960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDV79_00980 PF13358 DDE superfamily endonuclease FDV79_01025 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_01030 PF07369 Protein of unknown function (DUF1488) FDV79_01035 PF01488 Shikimate / quinate 5-dehydrogenase FDV79_01035 PF08501 Shikimate dehydrogenase substrate binding domain FDV79_01035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDV79_01040 PF01218 Coproporphyrinogen III oxidase FDV79_01045 PF01300 Telomere recombination FDV79_01050 PF00731 AIR carboxylase FDV79_01055 PF02222 ATP-grasp domain FDV79_01055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDV79_01060 PF01396 Topoisomerase DNA binding C4 zinc finger FDV79_01065 PF04361 Protein of unknown function (DUF494) FDV79_01070 PF02481 DNA recombination-mediator protein A FDV79_01070 PF17782 DprA winged helix domain FDV79_01080 PF01327 Polypeptide deformylase FDV79_01085 PF00551 Formyl transferase FDV79_01085 PF02911 Formyl transferase, C-terminal domain FDV79_01090 PF01029 NusB family FDV79_01090 PF01189 16S rRNA methyltransferase RsmB/F FDV79_01095 PF02254 TrkA-N domain FDV79_01095 PF02080 TrkA-C domain FDV79_01100 PF02386 Cation transport protein FDV79_01110 PF03006 Haemolysin-III related FDV79_01115 PF07070 SpoOM protein FDV79_01125 PF06288 Protein of unknown function (DUF1040) FDV79_01130 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FDV79_01130 PF12801 4Fe-4S binding domain FDV79_01130 PF13746 4Fe-4S dicluster domain FDV79_01135 PF01636 Phosphotransferase enzyme family FDV79_01140 PF01323 DSBA-like thioredoxin domain FDV79_01145 PF01553 Acyltransferase FDV79_01155 PF01078 Magnesium chelatase, subunit ChlI FDV79_01155 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDV79_01160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV79_01160 PF00205 Thiamine pyrophosphate enzyme, central domain FDV79_01160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV79_01170 PF01063 Amino-transferase class IV FDV79_01175 PF00920 Dehydratase family FDV79_01180 PF00585 C-terminal regulatory domain of Threonine dehydratase FDV79_01180 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_01185 PF03466 LysR substrate binding domain FDV79_01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_01190 PF07690 Major Facilitator Superfamily FDV79_01195 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_01200 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_01205 PF12804 MobA-like NTP transferase domain FDV79_01205 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_01210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDV79_01210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FDV79_01215 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV79_01215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_01220 PF00231 ATP synthase FDV79_01225 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV79_01225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_01225 PF00306 ATP synthase alpha/beta chain, C terminal domain FDV79_01230 PF00213 ATP synthase delta (OSCP) subunit FDV79_01235 PF00430 ATP synthase B/B' CF(0) FDV79_01240 PF00137 ATP synthase subunit C FDV79_01245 PF00119 ATP synthase A chain FDV79_01250 PF03899 ATP synthase I chain FDV79_01255 PF02195 ParB-like nuclease domain FDV79_01255 PF17762 HTH domain found in ParB protein FDV79_01260 PF13614 AAA domain FDV79_01265 PF02527 rRNA small subunit methyltransferase G FDV79_01270 PF01134 Glucose inhibited division protein A FDV79_01270 PF13932 GidA associated domain FDV79_01275 PF00258 Flavodoxin FDV79_01320 PF01420 Type I restriction modification DNA specificity domain FDV79_01325 PF02384 N-6 DNA Methylase FDV79_01325 PF12161 HsdM N-terminal domain FDV79_01335 PF08463 EcoEI R protein C-terminal FDV79_01335 PF04851 Type III restriction enzyme, res subunit FDV79_01335 PF00271 Helicase conserved C-terminal domain FDV79_01335 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FDV79_01365 PF02899 Phage integrase, N-terminal SAM-like domain FDV79_01365 PF00589 Phage integrase family FDV79_01370 PF01926 50S ribosome-binding GTPase FDV79_01370 PF12631 MnmE helical domain FDV79_01370 PF10396 GTP-binding protein TrmE N-terminus FDV79_01375 PF02096 60Kd inner membrane protein FDV79_01375 PF14849 YidC periplasmic domain FDV79_01380 PF01809 Putative membrane protein insertion efficiency factor FDV79_01385 PF00825 Ribonuclease P FDV79_01390 PF00468 Ribosomal protein L34 FDV79_01395 PF00005 ABC transporter FDV79_01400 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_01405 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_01420 PF00308 Bacterial dnaA protein FDV79_01420 PF08299 Bacterial dnaA protein helix-turn-helix FDV79_01420 PF11638 DnaA N-terminal domain FDV79_01425 PF02767 DNA polymerase III beta subunit, central domain FDV79_01425 PF00712 DNA polymerase III beta subunit, N-terminal domain FDV79_01425 PF02768 DNA polymerase III beta subunit, C-terminal domain FDV79_01430 PF02463 RecF/RecN/SMC N terminal domain FDV79_01435 PF00986 DNA gyrase B subunit, carboxyl terminus FDV79_01435 PF18053 DNA gyrase B subunit insert domain FDV79_01435 PF00204 DNA gyrase B FDV79_01435 PF01751 Toprim domain FDV79_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_01455 PF00011 Hsp20/alpha crystallin family FDV79_01460 PF00155 Aminotransferase class I and II FDV79_01465 PF00128 Alpha amylase, catalytic domain FDV79_01470 PF05746 DALR anticodon binding domain FDV79_01470 PF02092 Glycyl-tRNA synthetase beta subunit FDV79_01475 PF02091 Glycyl-tRNA synthetase alpha subunit FDV79_01480 PF01169 Uncharacterized protein family UPF0016 FDV79_01490 PF01206 Sulfurtransferase TusA FDV79_01500 PF03466 LysR substrate binding domain FDV79_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_01505 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_01505 PF00107 Zinc-binding dehydrogenase FDV79_01510 PF02803 Thiolase, C-terminal domain FDV79_01510 PF00108 Thiolase, N-terminal domain FDV79_01515 PF00378 Enoyl-CoA hydratase/isomerase FDV79_01515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDV79_01515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDV79_01520 PF09186 Domain of unknown function (DUF1949) FDV79_01520 PF01205 Uncharacterized protein family UPF0029 FDV79_01525 PF02386 Cation transport protein FDV79_01530 PF12724 Flavodoxin domain FDV79_01575 PF03466 LysR substrate binding domain FDV79_01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_01580 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDV79_01580 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDV79_01585 PF04380 Membrane fusogenic activity FDV79_01595 PF00873 AcrB/AcrD/AcrF family FDV79_01600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_01605 PF00440 Bacterial regulatory proteins, tetR family FDV79_01605 PF16295 Tetracyclin repressor-like, C-terminal domain FDV79_01610 PF13361 UvrD-like helicase C-terminal domain FDV79_01610 PF00580 UvrD/REP helicase N-terminal domain FDV79_01615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV79_01650 PF13419 Haloacid dehalogenase-like hydrolase FDV79_01665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_01665 PF00005 ABC transporter FDV79_01670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_01680 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_01680 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_01715 PF00069 Protein kinase domain FDV79_01720 PF00356 Bacterial regulatory proteins, lacI family FDV79_01720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV79_01725 PF03466 LysR substrate binding domain FDV79_01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_01730 PF00893 Small Multidrug Resistance protein FDV79_01735 PF00893 Small Multidrug Resistance protein FDV79_01740 PF00920 Dehydratase family FDV79_01745 PF01202 Shikimate kinase FDV79_01750 PF02447 GntP family permease FDV79_01755 PF01081 KDPG and KHG aldolase FDV79_01760 PF01048 Phosphorylase superfamily FDV79_01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_01765 PF03466 LysR substrate binding domain FDV79_01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_01770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV79_01775 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDV79_01785 PF01432 Peptidase family M3 FDV79_01790 PF01037 Lrp/AsnC ligand binding domain FDV79_01795 PF00563 EAL domain FDV79_01795 PF00990 Diguanylate cyclase, GGDEF domain FDV79_01795 PF08448 PAS fold FDV79_01800 PF04445 Putative SAM-dependent methyltransferase FDV79_01810 PF00892 EamA-like transporter family FDV79_01815 PF00582 Universal stress protein family FDV79_01820 PF00210 Ferritin-like domain FDV79_01825 PF10625 Universal stress protein B (UspB) FDV79_01835 PF01590 GAF domain FDV79_01835 PF02954 Bacterial regulatory protein, Fis family FDV79_01835 PF00158 Sigma-54 interaction domain FDV79_01840 PF04972 BON domain FDV79_01860 PF00781 Diacylglycerol kinase catalytic domain FDV79_01890 PF01594 AI-2E family transporter FDV79_01895 PF00990 Diguanylate cyclase, GGDEF domain FDV79_01895 PF00563 EAL domain FDV79_01895 PF03707 Bacterial signalling protein N terminal repeat FDV79_01905 PF02646 RmuC family FDV79_01910 PF01209 ubiE/COQ5 methyltransferase family FDV79_01915 PF02036 SCP-2 sterol transfer family FDV79_01920 PF03109 ABC1 family FDV79_01925 PF02416 mttA/Hcf106 family FDV79_01930 PF02416 mttA/Hcf106 family FDV79_01935 PF00902 Sec-independent protein translocase protein (TatC) FDV79_01945 PF01026 TatD related DNase FDV79_01955 PF00490 Delta-aminolevulinic acid dehydratase FDV79_01970 PF01367 5'-3' exonuclease, C-terminal SAM fold FDV79_01970 PF01612 3'-5' exonuclease FDV79_01970 PF00476 DNA polymerase family A FDV79_01970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDV79_01980 PF01926 50S ribosome-binding GTPase FDV79_01985 PF00034 Cytochrome c FDV79_02000 PF04220 Der GTPase activator (YihI) FDV79_02005 PF10675 Protein of unknown function (DUF2489) FDV79_02010 PF04055 Radical SAM superfamily FDV79_02010 PF06969 HemN C-terminal domain FDV79_02015 PF00962 Adenosine/AMP deaminase FDV79_02020 PF03707 Bacterial signalling protein N terminal repeat FDV79_02020 PF00990 Diguanylate cyclase, GGDEF domain FDV79_02020 PF00563 EAL domain FDV79_02025 PF00072 Response regulator receiver domain FDV79_02025 PF02954 Bacterial regulatory protein, Fis family FDV79_02025 PF00158 Sigma-54 interaction domain FDV79_02030 PF00989 PAS fold FDV79_02030 PF00512 His Kinase A (phospho-acceptor) domain FDV79_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_02040 PF00120 Glutamine synthetase, catalytic domain FDV79_02040 PF03951 Glutamine synthetase, beta-Grasp domain FDV79_02060 PF03631 Virulence factor BrkB FDV79_02065 PF02580 D-Tyr-tRNA(Tyr) deacylase FDV79_02070 PF09500 Putative thioesterase (yiiD_Cterm) FDV79_02070 PF00583 Acetyltransferase (GNAT) family FDV79_02080 PF01293 Phosphoenolpyruvate carboxykinase FDV79_02085 PF01430 Hsp33 protein FDV79_02090 PF01479 S4 domain FDV79_02095 PF11356 Type II secretion system protein C FDV79_02100 PF00263 Bacterial type II and III secretion system protein FDV79_02100 PF03958 Bacterial type II/III secretion system short domain FDV79_02105 PF00437 Type II/IV secretion system protein FDV79_02110 PF00482 Type II secretion system (T2SS), protein F FDV79_02115 PF08334 Type II secretion system (T2SS), protein G FDV79_02115 PF07963 Prokaryotic N-terminal methylation motif FDV79_02120 PF12019 Type II transport protein GspH FDV79_02125 PF07963 Prokaryotic N-terminal methylation motif FDV79_02125 PF02501 Type II secretion system (T2SS), protein I FDV79_02130 PF11612 Type II secretion system (T2SS), protein J FDV79_02130 PF07963 Prokaryotic N-terminal methylation motif FDV79_02135 PF03934 Type II secretion system (T2SS), protein K FDV79_02140 PF05134 Type II secretion system (T2SS), protein L FDV79_02140 PF12693 GspL periplasmic domain FDV79_02145 PF04612 Type II secretion system (T2SS), protein M FDV79_02150 PF01203 Type II secretion system (T2SS), protein N FDV79_02155 PF00459 Inositol monophosphatase family FDV79_02160 PF00293 NUDIX domain FDV79_02165 PF01521 Iron-sulphur cluster biosynthesis FDV79_02165 PF01106 NifU-like domain FDV79_02170 PF00156 Phosphoribosyl transferase domain FDV79_02175 PF00561 alpha/beta hydrolase fold FDV79_02185 PF17674 HHH domain FDV79_02185 PF00575 S1 RNA binding domain FDV79_02185 PF16921 Tex protein YqgF-like domain FDV79_02185 PF09371 Tex-like protein N-terminal domain FDV79_02195 PF03449 Transcription elongation factor, N-terminal FDV79_02195 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV79_02205 PF00486 Transcriptional regulatory protein, C terminal FDV79_02205 PF00072 Response regulator receiver domain FDV79_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_02210 PF00512 His Kinase A (phospho-acceptor) domain FDV79_02210 PF00672 HAMP domain FDV79_02215 PF00860 Permease family FDV79_02225 PF00270 DEAD/DEAH box helicase FDV79_02225 PF17191 RecG wedge domain FDV79_02225 PF00271 Helicase conserved C-terminal domain FDV79_02230 PF12105 SpoU, rRNA methylase, C-terminal FDV79_02230 PF00588 SpoU rRNA Methylase family FDV79_02235 PF02824 TGS domain FDV79_02235 PF04607 Region found in RelA / SpoT proteins FDV79_02235 PF13291 ACT domain FDV79_02240 PF01192 RNA polymerase Rpb6 FDV79_02245 PF00625 Guanylate kinase FDV79_02260 PF02472 Biopolymer transport protein ExbD/TolR FDV79_02265 PF01618 MotA/TolQ/ExbB proton channel family FDV79_02280 PF07715 TonB-dependent Receptor Plug Domain FDV79_02280 PF00593 TonB dependent receptor FDV79_02290 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_02295 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_02295 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_02300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_02305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_02305 PF00005 ABC transporter FDV79_02310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_02310 PF00005 ABC transporter FDV79_02375 PF04138 GtrA-like protein FDV79_02380 PF00535 Glycosyl transferase family 2 FDV79_02390 PF03755 YicC-like family, N-terminal region FDV79_02390 PF08340 Domain of unknown function (DUF1732) FDV79_02395 PF01138 3' exoribonuclease family, domain 1 FDV79_02395 PF03725 3' exoribonuclease family, domain 2 FDV79_02400 PF00156 Phosphoribosyl transferase domain FDV79_02405 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV79_02410 PF00440 Bacterial regulatory proteins, tetR family FDV79_02415 PF02441 Flavoprotein FDV79_02415 PF04127 DNA / pantothenate metabolism flavoprotein FDV79_02425 PF00672 HAMP domain FDV79_02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_02425 PF17200 Single Cache domain 2 FDV79_02430 PF04002 RadC-like JAB domain FDV79_02435 PF00830 Ribosomal L28 family FDV79_02440 PF00471 Ribosomal protein L33 FDV79_02450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDV79_02450 PF06827 Zinc finger found in FPG and IleRS FDV79_02450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDV79_02455 PF01467 Cytidylyltransferase-like FDV79_02460 PF05686 Glycosyl transferase family 90 FDV79_02465 PF00535 Glycosyl transferase family 2 FDV79_02470 PF00535 Glycosyl transferase family 2 FDV79_02475 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDV79_02480 PF01219 Prokaryotic diacylglycerol kinase FDV79_02490 PF16363 GDP-mannose 4,6 dehydratase FDV79_02495 PF00483 Nucleotidyl transferase FDV79_02500 PF05523 WxcM-like, C-terminal FDV79_02505 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_02505 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDV79_02515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDV79_02530 PF13439 Glycosyltransferase Family 4 FDV79_02530 PF00534 Glycosyl transferases group 1 FDV79_02540 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDV79_02545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDV79_02550 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV79_02555 PF01370 NAD dependent epimerase/dehydratase family FDV79_02560 PF06082 Exopolysaccharide biosynthesis protein YbjH FDV79_02595 PF16363 GDP-mannose 4,6 dehydratase FDV79_02600 PF00483 Nucleotidyl transferase FDV79_02605 PF05523 WxcM-like, C-terminal FDV79_02615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDV79_02630 PF01501 Glycosyl transferase family 8 FDV79_02630 PF00535 Glycosyl transferase family 2 FDV79_02640 PF00535 Glycosyl transferase family 2 FDV79_02665 PF00953 Glycosyl transferase family 4 FDV79_02670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDV79_02670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDV79_02670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDV79_02675 PF00483 Nucleotidyl transferase FDV79_02680 PF00121 Triosephosphate isomerase FDV79_02700 PF08220 DeoR-like helix-turn-helix domain FDV79_02700 PF00455 DeoR C terminal sensor domain FDV79_02705 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FDV79_02715 PF06005 Cell division protein ZapB FDV79_02720 PF03737 Aldolase/RraA FDV79_02725 PF01040 UbiA prenyltransferase family FDV79_02730 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_02730 PF07724 AAA domain (Cdc48 subfamily) FDV79_02735 PF00227 Proteasome subunit FDV79_02745 PF00356 Bacterial regulatory proteins, lacI family FDV79_02750 PF00270 DEAD/DEAH box helicase FDV79_02750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDV79_02750 PF00271 Helicase conserved C-terminal domain FDV79_02750 PF18074 Primosomal protein N C-terminal domain FDV79_02750 PF17764 3′ DNA-binding domain (3′BD) FDV79_02760 PF01197 Ribosomal protein L31 FDV79_02765 PF00338 Ribosomal protein S10p/S20e FDV79_02770 PF00297 Ribosomal protein L3 FDV79_02775 PF00573 Ribosomal protein L4/L1 family FDV79_02780 PF00276 Ribosomal protein L23 FDV79_02785 PF00181 Ribosomal Proteins L2, RNA binding domain FDV79_02785 PF03947 Ribosomal Proteins L2, C-terminal domain FDV79_02790 PF00203 Ribosomal protein S19 FDV79_02795 PF00237 Ribosomal protein L22p/L17e FDV79_02800 PF00189 Ribosomal protein S3, C-terminal domain FDV79_02800 PF07650 KH domain FDV79_02805 PF00252 Ribosomal protein L16p/L10e FDV79_02810 PF00831 Ribosomal L29 protein FDV79_02815 PF00366 Ribosomal protein S17 FDV79_02820 PF00238 Ribosomal protein L14p/L23e FDV79_02825 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDV79_02825 PF00467 KOW motif FDV79_02830 PF00673 ribosomal L5P family C-terminus FDV79_02830 PF00281 Ribosomal protein L5 FDV79_02835 PF00253 Ribosomal protein S14p/S29e FDV79_02840 PF00410 Ribosomal protein S8 FDV79_02845 PF00347 Ribosomal protein L6 FDV79_02850 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDV79_02855 PF00333 Ribosomal protein S5, N-terminal domain FDV79_02855 PF03719 Ribosomal protein S5, C-terminal domain FDV79_02860 PF00327 Ribosomal protein L30p/L7e FDV79_02865 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDV79_02870 PF00344 SecY translocase FDV79_02875 PF00444 Ribosomal protein L36 FDV79_02880 PF00416 Ribosomal protein S13/S18 FDV79_02885 PF00411 Ribosomal protein S11 FDV79_02890 PF01479 S4 domain FDV79_02890 PF00163 Ribosomal protein S4/S9 N-terminal domain FDV79_02895 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDV79_02895 PF01000 RNA polymerase Rpb3/RpoA insert domain FDV79_02895 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDV79_02900 PF01196 Ribosomal protein L17 FDV79_02910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_02910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV79_02920 PF13673 Acetyltransferase (GNAT) domain FDV79_02925 PF03880 DbpA RNA binding domain FDV79_02925 PF00271 Helicase conserved C-terminal domain FDV79_02925 PF00270 DEAD/DEAH box helicase FDV79_02935 PF00149 Calcineurin-like phosphoesterase FDV79_02935 PF02872 5'-nucleotidase, C-terminal domain FDV79_02940 PF10414 Sirohaem synthase dimerisation region FDV79_02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV79_02940 PF14824 Sirohaem biosynthesis protein central FDV79_02945 PF01507 Phosphoadenosine phosphosulfate reductase family FDV79_02950 PF00009 Elongation factor Tu GTP binding domain FDV79_02960 PF03600 Citrate transporter FDV79_02960 PF02080 TrkA-C domain FDV79_02985 PF00005 ABC transporter FDV79_02995 PF10795 Protein of unknown function (DUF2607) FDV79_03000 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDV79_03005 PF06526 Protein of unknown function (DUF1107) FDV79_03010 PF01625 Peptide methionine sulfoxide reductase FDV79_03015 PF01103 Surface antigen FDV79_03015 PF17243 POTRA domain TamA domain 1 FDV79_03020 PF04357 TamB, inner membrane protein subunit of TAM complex FDV79_03025 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FDV79_03035 PF00719 Inorganic pyrophosphatase FDV79_03040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDV79_03050 PF01225 Mur ligase family, catalytic domain FDV79_03050 PF02875 Mur ligase family, glutamate ligase domain FDV79_03050 PF08245 Mur ligase middle domain FDV79_03055 PF02441 Flavoprotein FDV79_03065 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_03070 PF00005 ABC transporter FDV79_03090 PF16868 NMT1-like family FDV79_03100 PF02863 Arginine repressor, C-terminal domain FDV79_03100 PF01316 Arginine repressor, DNA binding domain FDV79_03105 PF00056 lactate/malate dehydrogenase, NAD binding domain FDV79_03105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDV79_03115 PF00348 Polyprenyl synthetase FDV79_03120 PF00829 Ribosomal prokaryotic L21 protein FDV79_03125 PF01016 Ribosomal L27 protein FDV79_03130 PF01926 50S ribosome-binding GTPase FDV79_03130 PF01018 GTP1/OBG FDV79_03135 PF06738 Putative threonine/serine exporter FDV79_03140 PF12821 Threonine/Serine exporter, ThrE FDV79_03145 PF00186 Dihydrofolate reductase FDV79_03150 PF00149 Calcineurin-like phosphoesterase FDV79_03160 PF00398 Ribosomal RNA adenine dimethylase FDV79_03165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDV79_03170 PF09312 SurA N-terminal domain FDV79_03175 PF03968 OstA-like protein FDV79_03175 PF04453 LPS transport system D FDV79_03180 PF00226 DnaJ domain FDV79_03180 PF05099 Tellurite resistance protein TerB FDV79_03190 PF00694 Aconitase C-terminal domain FDV79_03195 PF00330 Aconitase family (aconitate hydratase) FDV79_03200 PF00180 Isocitrate/isopropylmalate dehydrogenase FDV79_03205 PF08502 LeuA allosteric (dimerisation) domain FDV79_03205 PF00682 HMGL-like FDV79_03220 PF01569 PAP2 superfamily FDV79_03230 PF03466 LysR substrate binding domain FDV79_03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_03235 PF00501 AMP-binding enzyme FDV79_03240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV79_03240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV79_03240 PF00205 Thiamine pyrophosphate enzyme, central domain FDV79_03245 PF10369 Small subunit of acetolactate synthase FDV79_03250 PF00990 Diguanylate cyclase, GGDEF domain FDV79_03250 PF07694 5TMR of 5TMR-LYT FDV79_03260 PF00224 Pyruvate kinase, barrel domain FDV79_03260 PF02887 Pyruvate kinase, alpha/beta domain FDV79_03270 PF08220 DeoR-like helix-turn-helix domain FDV79_03270 PF00455 DeoR C terminal sensor domain FDV79_03275 PF01380 SIS domain FDV79_03285 PF00486 Transcriptional regulatory protein, C terminal FDV79_03285 PF00072 Response regulator receiver domain FDV79_03290 PF00512 His Kinase A (phospho-acceptor) domain FDV79_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_03290 PF00672 HAMP domain FDV79_03295 PF13419 Haloacid dehalogenase-like hydrolase FDV79_03300 PF05068 Mannitol repressor FDV79_03305 PF08125 Mannitol dehydrogenase C-terminal domain FDV79_03305 PF01232 Mannitol dehydrogenase Rossmann domain FDV79_03310 PF02378 Phosphotransferase system, EIIC FDV79_03310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_03310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_03345 PF03180 NLPA lipoprotein FDV79_03355 PF04539 Sigma-70 region 3 FDV79_03355 PF00140 Sigma-70 factor, region 1.2 FDV79_03355 PF03979 Sigma-70 factor, region 1.1 FDV79_03355 PF04546 Sigma-70, non-essential region FDV79_03355 PF04545 Sigma-70, region 4 FDV79_03355 PF04542 Sigma-70 region 2 FDV79_03360 PF08278 DNA primase DnaG DnaB-binding FDV79_03360 PF01807 CHC2 zinc finger FDV79_03360 PF08275 DNA primase catalytic core, N-terminal domain FDV79_03360 PF10410 DnaB-helicase binding domain of primase FDV79_03365 PF09424 Yqey-like protein FDV79_03370 PF01165 Ribosomal protein S21 FDV79_03375 PF00814 Glycoprotease family FDV79_03380 PF12697 Alpha/beta hydrolase family FDV79_03385 PF02660 Glycerol-3-phosphate acyltransferase FDV79_03390 PF02152 Dihydroneopterin aldolase FDV79_03395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDV79_03400 PF02673 Bacitracin resistance protein BacA FDV79_03405 PF01966 HD domain FDV79_03405 PF01743 Poly A polymerase head domain FDV79_03405 PF12627 Probable RNA and SrmB- binding site of polymerase A FDV79_03410 PF01471 Putative peptidoglycan binding domain FDV79_03410 PF13401 AAA domain FDV79_03420 PF08239 Bacterial SH3 domain FDV79_03425 PF01384 Phosphate transporter family FDV79_03430 PF01865 Protein of unknown function DUF47 FDV79_03435 PF01928 CYTH domain FDV79_03445 PF00672 HAMP domain FDV79_03445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_03450 PF03710 Glutamate-ammonia ligase adenylyltransferase FDV79_03450 PF08335 GlnD PII-uridylyltransferase FDV79_03455 PF00294 pfkB family carbohydrate kinase FDV79_03455 PF01467 Cytidylyltransferase-like FDV79_03460 PF02321 Outer membrane efflux protein FDV79_03465 PF00293 NUDIX domain FDV79_03470 PF06853 Protein of unknown function (DUF1249) FDV79_03475 PF00149 Calcineurin-like phosphoesterase FDV79_03480 PF05728 Uncharacterised protein family (UPF0227) FDV79_03485 PF01751 Toprim domain FDV79_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_03485 PF00986 DNA gyrase B subunit, carboxyl terminus FDV79_03485 PF00204 DNA gyrase B FDV79_03490 PF03989 DNA gyrase C-terminal domain, beta-propeller FDV79_03490 PF00521 DNA gyrase/topoisomerase IV, subunit A FDV79_03495 PF13180 PDZ domain FDV79_03500 PF00595 PDZ domain FDV79_03505 PF06295 Protein of unknown function (DUF1043) FDV79_03515 PF03969 AFG1-like ATPase FDV79_03525 PF00572 Ribosomal protein L13 FDV79_03530 PF00380 Ribosomal protein S9/S16 FDV79_03535 PF00355 Rieske [2Fe-2S] domain FDV79_03535 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FDV79_03540 PF00032 Cytochrome b(C-terminal)/b6/petD FDV79_03540 PF00033 Cytochrome b/b6/petB FDV79_03545 PF02167 Cytochrome C1 family FDV79_03550 PF02798 Glutathione S-transferase, N-terminal domain FDV79_03550 PF00043 Glutathione S-transferase, C-terminal domain FDV79_03555 PF04386 Stringent starvation protein B FDV79_03560 PF04972 BON domain FDV79_03565 PF13580 SIS domain FDV79_03570 PF02021 Uncharacterised protein family UPF0102 FDV79_03575 PF04348 LppC putative lipoprotein FDV79_03580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV79_03595 PF01795 MraW methylase family FDV79_03600 PF04999 Cell division protein FtsL FDV79_03605 PF00905 Penicillin binding protein transpeptidase domain FDV79_03605 PF03717 Penicillin-binding Protein dimerisation domain FDV79_03610 PF08245 Mur ligase middle domain FDV79_03610 PF02875 Mur ligase family, glutamate ligase domain FDV79_03610 PF01225 Mur ligase family, catalytic domain FDV79_03615 PF02875 Mur ligase family, glutamate ligase domain FDV79_03615 PF08245 Mur ligase middle domain FDV79_03615 PF01225 Mur ligase family, catalytic domain FDV79_03620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FDV79_03620 PF00953 Glycosyl transferase family 4 FDV79_03625 PF02875 Mur ligase family, glutamate ligase domain FDV79_03625 PF08245 Mur ligase middle domain FDV79_03630 PF01098 Cell cycle protein FDV79_03635 PF03033 Glycosyltransferase family 28 N-terminal domain FDV79_03635 PF04101 Glycosyltransferase family 28 C-terminal domain FDV79_03640 PF08245 Mur ligase middle domain FDV79_03640 PF02875 Mur ligase family, glutamate ligase domain FDV79_03640 PF01225 Mur ligase family, catalytic domain FDV79_03645 PF08478 POTRA domain, FtsQ-type FDV79_03645 PF03799 Cell division protein FtsQ FDV79_03650 PF02491 SHS2 domain inserted in FTSA FDV79_03655 PF00091 Tubulin/FtsZ family, GTPase domain FDV79_03655 PF12327 FtsZ family, C-terminal domain FDV79_03660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDV79_03670 PF07517 SecA DEAD-like domain FDV79_03670 PF02810 SEC-C motif FDV79_03670 PF01043 SecA preprotein cross-linking domain FDV79_03670 PF07516 SecA Wing and Scaffold domain FDV79_03675 PF00293 NUDIX domain FDV79_03680 PF01113 Dihydrodipicolinate reductase, N-terminus FDV79_03680 PF05173 Dihydrodipicolinate reductase, C-terminus FDV79_03685 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDV79_03685 PF00117 Glutamine amidotransferase class-I FDV79_03690 PF02142 MGS-like domain FDV79_03690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDV79_03690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV79_03705 PF01925 Sulfite exporter TauE/SafE FDV79_03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_03710 PF03466 LysR substrate binding domain FDV79_03715 PF03458 UPF0126 domain FDV79_03720 PF01497 Periplasmic binding protein FDV79_03725 PF03186 CobD/Cbib protein FDV79_03725 PF17113 Regulatory signalling modulator protein AmpE FDV79_03730 PF01048 Phosphorylase superfamily FDV79_03740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV79_03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_03745 PF01493 GXGXG motif FDV79_03745 PF04898 Glutamate synthase central domain FDV79_03745 PF00310 Glutamine amidotransferases class-II FDV79_03745 PF01645 Conserved region in glutamate synthase FDV79_03750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV79_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_03755 PF01493 GXGXG motif FDV79_03755 PF01645 Conserved region in glutamate synthase FDV79_03755 PF04898 Glutamate synthase central domain FDV79_03755 PF00310 Glutamine amidotransferases class-II FDV79_03760 PF04055 Radical SAM superfamily FDV79_03760 PF16199 Radical_SAM C-terminal domain FDV79_03765 PF00563 EAL domain FDV79_03765 PF01590 GAF domain FDV79_03765 PF00990 Diguanylate cyclase, GGDEF domain FDV79_03765 PF00360 Phytochrome region FDV79_03770 PF18415 Histidine kinase receptor ArcB trans-membrane domain FDV79_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_03770 PF00512 His Kinase A (phospho-acceptor) domain FDV79_03770 PF00072 Response regulator receiver domain FDV79_03770 PF00989 PAS fold FDV79_03770 PF01627 Hpt domain FDV79_03780 PF00486 Transcriptional regulatory protein, C terminal FDV79_03780 PF00072 Response regulator receiver domain FDV79_03795 PF03737 Aldolase/RraA FDV79_03805 PF00696 Amino acid kinase family FDV79_03805 PF03447 Homoserine dehydrogenase, NAD binding domain FDV79_03805 PF01842 ACT domain FDV79_03805 PF00742 Homoserine dehydrogenase FDV79_03805 PF13840 ACT domain FDV79_03810 PF08544 GHMP kinases C terminal FDV79_03810 PF00288 GHMP kinases N terminal domain FDV79_03815 PF14821 Threonine synthase N terminus FDV79_03815 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_03820 PF01228 Glycine radical FDV79_03825 PF01261 Xylose isomerase-like TIM barrel FDV79_03835 PF03167 Uracil DNA glycosylase superfamily FDV79_03850 PF01235 Sodium:alanine symporter family FDV79_03855 PF03883 Peroxide stress protein YaaA FDV79_03860 PF00270 DEAD/DEAH box helicase FDV79_03860 PF00271 Helicase conserved C-terminal domain FDV79_03865 PF05175 Methyltransferase small domain FDV79_03870 PF05525 Branched-chain amino acid transport protein FDV79_03875 PF00258 Flavodoxin FDV79_03880 PF02899 Phage integrase, N-terminal SAM-like domain FDV79_03880 PF00589 Phage integrase family FDV79_03885 PF13098 Thioredoxin-like domain FDV79_03885 PF10411 Disulfide bond isomerase protein N-terminus FDV79_03890 PF17768 RecJ OB domain FDV79_03890 PF02272 DHHA1 domain FDV79_03890 PF01368 DHH family FDV79_03900 PF00152 tRNA synthetases class II (D, K and N) FDV79_03900 PF01336 OB-fold nucleic acid binding domain FDV79_03905 PF02954 Bacterial regulatory protein, Fis family FDV79_03905 PF00072 Response regulator receiver domain FDV79_03905 PF00158 Sigma-54 interaction domain FDV79_03915 PF00248 Aldo/keto reductase family FDV79_03925 PF02976 DNA mismatch repair enzyme MutH FDV79_03935 PF00293 NUDIX domain FDV79_03940 PF05524 PEP-utilising enzyme, N-terminal FDV79_03940 PF02896 PEP-utilising enzyme, TIM barrel domain FDV79_03940 PF00391 PEP-utilising enzyme, mobile domain FDV79_03940 PF01590 GAF domain FDV79_03945 PF01925 Sulfite exporter TauE/SafE FDV79_03950 PF01790 Prolipoprotein diacylglyceryl transferase FDV79_03955 PF00303 Thymidylate synthase FDV79_03965 PF02690 Na+/Pi-cotransporter FDV79_03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_03970 PF03466 LysR substrate binding domain FDV79_03980 PF01022 Bacterial regulatory protein, arsR family FDV79_03990 PF01649 Ribosomal protein S20 FDV79_03995 PF03023 Lipid II flippase MurJ FDV79_04000 PF06574 FAD synthetase FDV79_04000 PF01687 Riboflavin kinase FDV79_04005 PF08264 Anticodon-binding domain of tRNA FDV79_04005 PF00133 tRNA synthetases class I (I, L, M and V) FDV79_04005 PF06827 Zinc finger found in FPG and IleRS FDV79_04010 PF01252 Signal peptidase (SPase) II FDV79_04015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_04020 PF02401 LytB protein FDV79_04025 PF00072 Response regulator receiver domain FDV79_04025 PF04397 LytTr DNA-binding domain FDV79_04030 PF06580 Histidine kinase FDV79_04030 PF07694 5TMR of 5TMR-LYT FDV79_04035 PF02554 Carbon starvation protein CstA FDV79_04050 PF13580 SIS domain FDV79_04055 PF03702 Anhydro-N-acetylmuramic acid kinase FDV79_04060 PF00933 Glycosyl hydrolase family 3 N terminal domain FDV79_04065 PF00793 DAHP synthetase I family FDV79_04070 PF02153 Prephenate dehydrogenase FDV79_04070 PF01817 Chorismate mutase type II FDV79_04075 PF04225 Opacity-associated protein A LysM-like domain FDV79_04075 PF01551 Peptidase family M23 FDV79_04080 PF07238 PilZ domain FDV79_04090 PF00005 ABC transporter FDV79_04090 PF12848 ABC transporter FDV79_04095 PF14718 Soluble lytic murein transglycosylase L domain FDV79_04095 PF01464 Transglycosylase SLT domain FDV79_04100 PF01371 Trp repressor protein FDV79_04105 PF01931 Protein of unknown function DUF84 FDV79_04110 PF01817 Chorismate mutase type II FDV79_04110 PF00800 Prephenate dehydratase FDV79_04115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDV79_04120 PF01464 Transglycosylase SLT domain FDV79_04125 PF13525 Outer membrane lipoprotein FDV79_04130 PF01479 S4 domain FDV79_04130 PF00849 RNA pseudouridylate synthase FDV79_04140 PF07724 AAA domain (Cdc48 subfamily) FDV79_04140 PF02861 Clp amino terminal domain, pathogenicity island component FDV79_04140 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_04140 PF10431 C-terminal, D2-small domain, of ClpB protein FDV79_04140 PF17871 AAA lid domain FDV79_04190 PF03411 Penicillin-insensitive murein endopeptidase FDV79_04200 PF00037 4Fe-4S binding domain FDV79_04210 PF04381 Putative exonuclease, RdgC FDV79_04220 PF00486 Transcriptional regulatory protein, C terminal FDV79_04220 PF00072 Response regulator receiver domain FDV79_04225 PF11808 Phosphate regulon sensor protein PhoR FDV79_04225 PF00512 His Kinase A (phospho-acceptor) domain FDV79_04225 PF00989 PAS fold FDV79_04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_04230 PF12849 PBP superfamily domain FDV79_04235 PF02541 Ppx/GppA phosphatase family FDV79_04240 PF13090 Polyphosphate kinase C-terminal domain 2 FDV79_04240 PF02503 Polyphosphate kinase middle domain FDV79_04240 PF17941 Polyphosphate kinase C-terminal domain 1 FDV79_04240 PF13089 Polyphosphate kinase N-terminal domain FDV79_04245 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_04250 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_04255 PF00005 ABC transporter FDV79_04260 PF01895 PhoU domain FDV79_04265 PF03976 Polyphosphate kinase 2 (PPK2) FDV79_04270 PF03932 CutC family FDV79_04280 PF00578 AhpC/TSA family FDV79_04280 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDV79_04285 PF03466 LysR substrate binding domain FDV79_04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_04295 PF01274 Malate synthase FDV79_04300 PF00463 Isocitrate lyase family FDV79_04305 PF00571 CBS domain FDV79_04320 PF02547 Queuosine biosynthesis protein FDV79_04325 PF01702 Queuine tRNA-ribosyltransferase FDV79_04330 PF02699 Preprotein translocase subunit FDV79_04335 PF02355 Protein export membrane protein FDV79_04335 PF13721 SecD export protein N-terminal TM region FDV79_04335 PF07549 SecD/SecF GG Motif FDV79_04340 PF02355 Protein export membrane protein FDV79_04340 PF07549 SecD/SecF GG Motif FDV79_04350 PF00459 Inositol monophosphatase family FDV79_04355 PF00588 SpoU rRNA Methylase family FDV79_04360 PF02082 Transcriptional regulator FDV79_04365 PF00266 Aminotransferase class-V FDV79_04370 PF01592 NifU-like N terminal domain FDV79_04375 PF01521 Iron-sulphur cluster biosynthesis FDV79_04380 PF00226 DnaJ domain FDV79_04380 PF07743 HSCB C-terminal oligomerisation domain FDV79_04385 PF00012 Hsp70 protein FDV79_04390 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_04395 PF04384 Iron-sulphur cluster assembly FDV79_04400 PF00883 Cytosol aminopeptidase family, catalytic domain FDV79_04400 PF12404 Peptidase FDV79_04405 PF00334 Nucleoside diphosphate kinase FDV79_04410 PF04055 Radical SAM superfamily FDV79_04420 PF13464 Domain of unknown function (DUF4115) FDV79_04425 PF04551 GcpE protein FDV79_04430 PF03129 Anticodon binding domain FDV79_04430 PF13393 Histidyl-tRNA synthetase FDV79_04435 PF09976 Tetratricopeptide repeat-like domain FDV79_04440 PF13360 PQQ-like domain FDV79_04445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDV79_04445 PF01926 50S ribosome-binding GTPase FDV79_04460 PF02601 Exonuclease VII, large subunit FDV79_04460 PF13742 OB-fold nucleic acid binding domain FDV79_04465 PF00571 CBS domain FDV79_04465 PF00478 IMP dehydrogenase / GMP reductase domain FDV79_04470 PF00958 GMP synthase C terminal domain FDV79_04470 PF00117 Glutamine amidotransferase class-I FDV79_04470 PF02540 NAD synthase FDV79_04475 PF03553 Na+/H+ antiporter family FDV79_04480 PF00704 Glycosyl hydrolases family 18 FDV79_04480 PF06483 Chitinase C FDV79_04485 PF01184 GPR1/FUN34/yaaH family FDV79_04495 PF01235 Sodium:alanine symporter family FDV79_04500 PF01266 FAD dependent oxidoreductase FDV79_04505 PF03466 LysR substrate binding domain FDV79_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_04525 PF07969 Amidohydrolase family FDV79_04535 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV79_04540 PF00202 Aminotransferase class-III FDV79_04560 PF00795 Carbon-nitrogen hydrolase FDV79_04560 PF00583 Acetyltransferase (GNAT) family FDV79_04565 PF03466 LysR substrate binding domain FDV79_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_04615 PF04002 RadC-like JAB domain FDV79_04640 PF04471 Restriction endonuclease FDV79_04640 PF14338 Mrr N-terminal domain FDV79_04645 PF02384 N-6 DNA Methylase FDV79_04645 PF12161 HsdM N-terminal domain FDV79_04665 PF18766 SWI2/SNF2 ATPase FDV79_04665 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDV79_04665 PF11867 Domain of unknown function (DUF3387) FDV79_04675 PF13356 Arm DNA-binding domain FDV79_04675 PF00589 Phage integrase family FDV79_04685 PF01668 SmpB protein FDV79_04690 PF03364 Polyketide cyclase / dehydrase and lipid transport FDV79_04695 PF03658 RnfH family Ubiquitin FDV79_04700 PF04355 SmpA / OmlA family FDV79_04705 PF02463 RecF/RecN/SMC N terminal domain FDV79_04715 PF01513 ATP-NAD kinase FDV79_04720 PF01025 GrpE FDV79_04725 PF00375 Sodium:dicarboxylate symporter family FDV79_04730 PF00012 Hsp70 protein FDV79_04735 PF00226 DnaJ domain FDV79_04735 PF00684 DnaJ central domain FDV79_04735 PF01556 DnaJ C terminal domain FDV79_04745 PF07963 Prokaryotic N-terminal methylation motif FDV79_04745 PF00114 Pilin (bacterial filament) FDV79_04750 PF07963 Prokaryotic N-terminal methylation motif FDV79_04750 PF00114 Pilin (bacterial filament) FDV79_04775 PF03806 AbgT putative transporter family FDV79_04780 PF14437 MafB19-like deaminase FDV79_04790 PF01464 Transglycosylase SLT domain FDV79_04790 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_04795 PF02769 AIR synthase related protein, C-terminal domain FDV79_04795 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDV79_04795 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDV79_04820 PF01546 Peptidase family M20/M25/M40 FDV79_04820 PF07687 Peptidase dimerisation domain FDV79_04825 PF00860 Permease family FDV79_04830 PF00156 Phosphoribosyl transferase domain FDV79_04840 PF07417 Sigma factor-binding transcriptional regulator Crl FDV79_04845 PF01472 PUA domain FDV79_04845 PF00696 Amino acid kinase family FDV79_04850 PF00171 Aldehyde dehydrogenase family FDV79_04855 PF03477 ATP cone domain FDV79_04860 PF01872 RibD C-terminal domain FDV79_04860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV79_04865 PF00677 Lumazine binding domain FDV79_04870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDV79_04870 PF00925 GTP cyclohydrolase II FDV79_04875 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDV79_04880 PF01029 NusB family FDV79_04885 PF02769 AIR synthase related protein, C-terminal domain FDV79_04885 PF00586 AIR synthase related protein, N-terminal domain FDV79_04890 PF04608 Phosphatidylglycerophosphatase A FDV79_04895 PF02779 Transketolase, pyrimidine binding domain FDV79_04895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDV79_04895 PF02780 Transketolase, C-terminal domain FDV79_04900 PF00348 Polyprenyl synthetase FDV79_04905 PF02609 Exonuclease VII small subunit FDV79_04910 PF01618 MotA/TolQ/ExbB proton channel family FDV79_04915 PF00691 OmpA family FDV79_04920 PF02926 THUMP domain FDV79_04920 PF02568 Thiamine biosynthesis protein (ThiI) FDV79_04925 PF03466 LysR substrate binding domain FDV79_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_04935 PF04241 Protein of unknown function (DUF423) FDV79_04940 PF18125 RlmM ferredoxin-like domain FDV79_04940 PF01728 FtsJ-like methyltransferase FDV79_04945 PF01223 DNA/RNA non-specific endonuclease FDV79_04950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDV79_04950 PF01367 5'-3' exonuclease, C-terminal SAM fold FDV79_04955 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FDV79_04955 PF03641 Possible lysine decarboxylase FDV79_04955 PF11892 Domain of unknown function (DUF3412) FDV79_04960 PF00990 Diguanylate cyclase, GGDEF domain FDV79_04960 PF00072 Response regulator receiver domain FDV79_04970 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDV79_04970 PF14489 QueF-like protein FDV79_04975 PF07348 Syd protein (SUKH-2) FDV79_04980 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FDV79_04985 PF03180 NLPA lipoprotein FDV79_04990 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_04995 PF00005 ABC transporter FDV79_04995 PF09383 NIL domain FDV79_05010 PF00356 Bacterial regulatory proteins, lacI family FDV79_05015 PF02378 Phosphotransferase system, EIIC FDV79_05015 PF00367 phosphotransferase system, EIIB FDV79_05020 PF00128 Alpha amylase, catalytic domain FDV79_05020 PF16657 Maltogenic Amylase, C-terminal domain FDV79_05035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FDV79_05035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FDV79_05040 PF00464 Serine hydroxymethyltransferase FDV79_05045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FDV79_05045 PF04055 Radical SAM superfamily FDV79_05050 PF03099 Biotin/lipoate A/B protein ligase family FDV79_05055 PF04359 Protein of unknown function (DUF493) FDV79_05060 PF00768 D-alanyl-D-alanine carboxypeptidase FDV79_05060 PF07943 Penicillin-binding protein 5, C-terminal domain FDV79_05065 PF03330 Lytic transglycolase FDV79_05065 PF05036 Sporulation related domain FDV79_05070 PF01098 Cell cycle protein FDV79_05075 PF00905 Penicillin binding protein transpeptidase domain FDV79_05075 PF03717 Penicillin-binding Protein dimerisation domain FDV79_05080 PF02590 Predicted SPOUT methyltransferase FDV79_05090 PF06144 DNA polymerase III, delta subunit FDV79_05090 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FDV79_05095 PF04390 Lipopolysaccharide-assembly FDV79_05100 PF08264 Anticodon-binding domain of tRNA FDV79_05100 PF00133 tRNA synthetases class I (I, L, M and V) FDV79_05100 PF13603 Leucyl-tRNA synthetase, Domain 2 FDV79_05105 PF07295 Zinc-ribbon containing domain FDV79_05110 PF00795 Carbon-nitrogen hydrolase FDV79_05115 PF03471 Transporter associated domain FDV79_05115 PF00571 CBS domain FDV79_05120 PF02130 Uncharacterized protein family UPF0054 FDV79_05125 PF02562 PhoH-like protein FDV79_05130 PF04055 Radical SAM superfamily FDV79_05130 PF01938 TRAM domain FDV79_05130 PF00919 Uncharacterized protein family UPF0004 FDV79_05140 PF01494 FAD binding domain FDV79_05255 PF06071 Protein of unknown function (DUF933) FDV79_05255 PF01926 50S ribosome-binding GTPase FDV79_05260 PF01195 Peptidyl-tRNA hydrolase FDV79_05265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDV79_05265 PF14572 Phosphoribosyl synthetase-associated domain FDV79_05270 PF08544 GHMP kinases C terminal FDV79_05270 PF00288 GHMP kinases N terminal domain FDV79_05275 PF03550 Outer membrane lipoprotein LolB FDV79_05280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDV79_05280 PF01488 Shikimate / quinate 5-dehydrogenase FDV79_05280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDV79_05285 PF00472 RF-1 domain FDV79_05285 PF03462 PCRF domain FDV79_05290 PF13847 Methyltransferase domain FDV79_05290 PF17827 PrmC N-terminal domain FDV79_05295 PF04247 Invasion gene expression up-regulator, SirB FDV79_05300 PF13369 Transglutaminase-like superfamily FDV79_05305 PF00793 DAHP synthetase I family FDV79_05310 PF02872 5'-nucleotidase, C-terminal domain FDV79_05310 PF00149 Calcineurin-like phosphoesterase FDV79_05315 PF04073 Aminoacyl-tRNA editing domain FDV79_05320 PF01479 S4 domain FDV79_05320 PF00849 RNA pseudouridylate synthase FDV79_05325 PF01713 Smr domain FDV79_05350 PF03173 Putative carbohydrate binding domain FDV79_05350 PF02838 Glycosyl hydrolase family 20, domain 2 FDV79_05350 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FDV79_05350 PF00728 Glycosyl hydrolase family 20, catalytic domain FDV79_05365 PF00403 Heavy-metal-associated domain FDV79_05375 PF13609 Gram-negative porin FDV79_05380 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV79_05385 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV79_05395 PF01389 OmpA-like transmembrane domain FDV79_05395 PF00691 OmpA family FDV79_05445 PF01584 CheW-like domain FDV79_05445 PF00072 Response regulator receiver domain FDV79_05450 PF03705 CheR methyltransferase, all-alpha domain FDV79_05450 PF01739 CheR methyltransferase, SAM binding domain FDV79_05455 PF00460 Flagella basal body rod protein FDV79_05460 PF00460 Flagella basal body rod protein FDV79_05460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_05465 PF03963 Flagellar hook capping protein - N-terminal region FDV79_05465 PF13860 FlgD Ig-like domain FDV79_05465 PF13861 FlgD Tudor-like domain FDV79_05470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_05470 PF07559 Flagellar basal body protein FlaE FDV79_05470 PF00460 Flagella basal body rod protein FDV79_05480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_05480 PF00460 Flagella basal body rod protein FDV79_05485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_05485 PF00460 Flagella basal body rod protein FDV79_05490 PF02107 Flagellar L-ring protein FDV79_05495 PF02119 Flagellar P-ring protein FDV79_05500 PF10135 Rod binding protein FDV79_05500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDV79_05505 PF07196 Flagellin hook IN motif FDV79_05505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_05510 PF00669 Bacterial flagellin N-terminal helical region FDV79_05520 PF00669 Bacterial flagellin N-terminal helical region FDV79_05520 PF00700 Bacterial flagellin C-terminal helical region FDV79_05520 PF07196 Flagellin hook IN motif FDV79_05530 PF07196 Flagellin hook IN motif FDV79_05530 PF00700 Bacterial flagellin C-terminal helical region FDV79_05530 PF00669 Bacterial flagellin N-terminal helical region FDV79_05535 PF00669 Bacterial flagellin N-terminal helical region FDV79_05535 PF07196 Flagellin hook IN motif FDV79_05535 PF00700 Bacterial flagellin C-terminal helical region FDV79_05545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FDV79_05550 PF00391 PEP-utilising enzyme, mobile domain FDV79_05550 PF02896 PEP-utilising enzyme, TIM barrel domain FDV79_05550 PF05524 PEP-utilising enzyme, N-terminal FDV79_05555 PF00381 PTS HPr component phosphorylation site FDV79_05565 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_05575 PF04354 ZipA, C-terminal FtsZ-binding domain FDV79_05580 PF12826 Helix-hairpin-helix motif FDV79_05580 PF01653 NAD-dependent DNA ligase adenylation domain FDV79_05580 PF03120 NAD-dependent DNA ligase OB-fold domain FDV79_05580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDV79_05580 PF00533 BRCA1 C Terminus (BRCT) domain FDV79_05590 PF03573 outer membrane porin, OprD family FDV79_05605 PF01145 SPFH domain / Band 7 family FDV79_05605 PF16200 C-terminal region of band_7 FDV79_05610 PF00085 Thioredoxin FDV79_05620 PF00106 short chain dehydrogenase FDV79_05625 PF01370 NAD dependent epimerase/dehydratase family FDV79_05625 PF08338 Domain of unknown function (DUF1731) FDV79_05630 PF07556 Protein of unknown function (DUF1538) FDV79_05635 PF07556 Protein of unknown function (DUF1538) FDV79_05655 PF12850 Calcineurin-like phosphoesterase superfamily domain FDV79_05670 PF17323 Trans-membrane regulatory protein ToxS FDV79_05675 PF00486 Transcriptional regulatory protein, C terminal FDV79_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_05680 PF00183 Hsp90 protein FDV79_05685 PF05191 Adenylate kinase, active site lid FDV79_05690 PF00762 Ferrochelatase FDV79_05695 PF00854 POT family FDV79_05700 PF02357 Transcription termination factor nusG FDV79_05705 PF00733 Asparagine synthase FDV79_05705 PF13537 Glutamine amidotransferase domain FDV79_05710 PF00999 Sodium/hydrogen exchanger family FDV79_05710 PF02254 TrkA-N domain FDV79_05715 PF01047 MarR family FDV79_05715 PF00480 ROK family FDV79_05720 PF01979 Amidohydrolase family FDV79_05730 PF02378 Phosphotransferase system, EIIC FDV79_05730 PF00367 phosphotransferase system, EIIB FDV79_05735 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV79_05735 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDV79_05740 PF01475 Ferric uptake regulator family FDV79_05750 PF00258 Flavodoxin FDV79_05760 PF12697 Alpha/beta hydrolase family FDV79_05765 PF03925 SeqA protein C-terminal domain FDV79_05765 PF17206 SeqA protein N-terminal domain FDV79_05770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV79_05770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV79_05770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV79_05770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV79_05780 PF01784 NIF3 (NGG1p interacting factor 3) FDV79_05785 PF00285 Citrate synthase, C-terminal domain FDV79_05790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDV79_05795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDV79_05800 PF02910 Fumarate reductase flavoprotein C-term FDV79_05800 PF00890 FAD binding domain FDV79_05805 PF13085 2Fe-2S iron-sulfur cluster binding domain FDV79_05810 PF16870 2-oxoglutarate dehydrogenase C-terminal FDV79_05810 PF16078 2-oxoglutarate dehydrogenase N-terminus FDV79_05810 PF00676 Dehydrogenase E1 component FDV79_05810 PF02779 Transketolase, pyrimidine binding domain FDV79_05815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV79_05815 PF00364 Biotin-requiring enzyme FDV79_05815 PF02817 e3 binding domain FDV79_05820 PF08442 ATP-grasp domain FDV79_05820 PF00549 CoA-ligase FDV79_05825 PF02629 CoA binding domain FDV79_05825 PF00549 CoA-ligase FDV79_05830 PF00950 ABC 3 transport family FDV79_05835 PF00005 ABC transporter FDV79_05840 PF01297 Zinc-uptake complex component A periplasmic FDV79_05845 PF02311 AraC-like ligand binding domain FDV79_05845 PF12833 Helix-turn-helix domain FDV79_05860 PF04023 FeoA domain FDV79_05865 PF07664 Ferrous iron transport protein B C terminus FDV79_05865 PF02421 Ferrous iron transport protein B FDV79_05865 PF07670 Nucleoside recognition FDV79_05865 PF17910 FeoB cytosolic helical domain FDV79_05880 PF00750 tRNA synthetases class I (R) FDV79_05880 PF05746 DALR anticodon binding domain FDV79_05880 PF03485 Arginyl tRNA synthetase N terminal domain FDV79_05890 PF06185 YecM protein FDV79_05895 PF01842 ACT domain FDV79_05895 PF00551 Formyl transferase FDV79_05900 PF13307 Helicase C-terminal domain FDV79_05900 PF04851 Type III restriction enzyme, res subunit FDV79_05905 PF00814 Glycoprotease family FDV79_05920 PF00561 alpha/beta hydrolase fold FDV79_05925 PF00501 AMP-binding enzyme FDV79_05925 PF13193 AMP-binding enzyme C-terminal domain FDV79_05930 PF01612 3'-5' exonuclease FDV79_05930 PF00570 HRDC domain FDV79_05935 PF03776 Septum formation topological specificity factor MinE FDV79_05940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDV79_05945 PF03775 Septum formation inhibitor MinC, C-terminal domain FDV79_05945 PF05209 Septum formation inhibitor MinC, N-terminal domain FDV79_05950 PF05166 YcgL domain FDV79_05955 PF13406 Transglycosylase SLT domain FDV79_05960 PF03466 LysR substrate binding domain FDV79_05960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_05965 PF01773 Na+ dependent nucleoside transporter N-terminus FDV79_05965 PF07662 Na+ dependent nucleoside transporter C-terminus FDV79_05965 PF07670 Nucleoside recognition FDV79_05970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDV79_05970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDV79_05985 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV79_05985 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV79_05995 PF07977 FabA-like domain FDV79_06000 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV79_06000 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV79_06025 PF00221 Aromatic amino acid lyase FDV79_06030 PF00535 Glycosyl transferase family 2 FDV79_06035 PF07977 FabA-like domain FDV79_06050 PF00550 Phosphopantetheine attachment site FDV79_06055 PF00550 Phosphopantetheine attachment site FDV79_06080 PF04820 Tryptophan halogenase FDV79_06090 PF03471 Transporter associated domain FDV79_06090 PF01595 Cyclin M transmembrane N-terminal domain FDV79_06090 PF00571 CBS domain FDV79_06095 PF00270 DEAD/DEAH box helicase FDV79_06095 PF00271 Helicase conserved C-terminal domain FDV79_06100 PF02080 TrkA-C domain FDV79_06100 PF02254 TrkA-N domain FDV79_06105 PF02386 Cation transport protein FDV79_06120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDV79_06125 PF03480 Bacterial extracellular solute-binding protein, family 7 FDV79_06130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FDV79_06135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDV79_06145 PF00072 Response regulator receiver domain FDV79_06145 PF00158 Sigma-54 interaction domain FDV79_06145 PF02954 Bacterial regulatory protein, Fis family FDV79_06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_06150 PF02743 Cache domain FDV79_06150 PF00512 His Kinase A (phospho-acceptor) domain FDV79_06155 PF05698 Bacterial trigger factor protein (TF) C-terminus FDV79_06155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_06155 PF05697 Bacterial trigger factor protein (TF) FDV79_06160 PF00574 Clp protease FDV79_06165 PF07724 AAA domain (Cdc48 subfamily) FDV79_06165 PF10431 C-terminal, D2-small domain, of ClpB protein FDV79_06165 PF06689 ClpX C4-type zinc finger FDV79_06170 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_06170 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV79_06170 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDV79_06175 PF00216 Bacterial DNA-binding protein FDV79_06180 PF13145 PPIC-type PPIASE domain FDV79_06200 PF13286 Phosphohydrolase-associated domain FDV79_06200 PF01966 HD domain FDV79_06210 PF00155 Aminotransferase class I and II FDV79_06215 PF00425 chorismate binding enzyme FDV79_06220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDV79_06220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDV79_06220 PF16582 Middle domain of thiamine pyrophosphate FDV79_06225 PF12697 Alpha/beta hydrolase family FDV79_06230 PF00378 Enoyl-CoA hydratase/isomerase FDV79_06235 PF13378 Enolase C-terminal domain-like FDV79_06240 PF00501 AMP-binding enzyme FDV79_06240 PF13193 AMP-binding enzyme C-terminal domain FDV79_06250 PF03601 Conserved hypothetical protein 698 FDV79_06255 PF07690 Major Facilitator Superfamily FDV79_06300 PF13533 Biotin-lipoyl like FDV79_06305 PF00873 AcrB/AcrD/AcrF family FDV79_06330 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_06335 PF13404 AsnC-type helix-turn-helix domain FDV79_06335 PF01037 Lrp/AsnC ligand binding domain FDV79_06350 PF09619 Type III secretion system lipoprotein chaperone (YscW) FDV79_06355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDV79_06365 PF00990 Diguanylate cyclase, GGDEF domain FDV79_06365 PF17152 Periplasmic sensor domain FDV79_06375 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDV79_06375 PF00588 SpoU rRNA Methylase family FDV79_06380 PF00037 4Fe-4S binding domain FDV79_06380 PF11953 Domain of unknown function (DUF3470) FDV79_06395 PF00478 IMP dehydrogenase / GMP reductase domain FDV79_06395 PF00571 CBS domain FDV79_06400 PF00403 Heavy-metal-associated domain FDV79_06405 PF01048 Phosphorylase superfamily FDV79_06420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_06420 PF00672 HAMP domain FDV79_06425 PF01230 HIT domain FDV79_06440 PF13036 Peptidoglycan-synthase activator LpoB FDV79_06440 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDV79_06450 PF05728 Uncharacterised protein family (UPF0227) FDV79_06460 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_06475 PF02559 CarD-like/TRCF domain FDV79_06475 PF00270 DEAD/DEAH box helicase FDV79_06475 PF17757 UvrB interaction domain FDV79_06475 PF03461 TRCF domain FDV79_06475 PF00271 Helicase conserved C-terminal domain FDV79_06485 PF02687 FtsX-like permease family FDV79_06485 PF12704 MacB-like periplasmic core domain FDV79_06490 PF00005 ABC transporter FDV79_06495 PF12704 MacB-like periplasmic core domain FDV79_06495 PF02687 FtsX-like permease family FDV79_06505 PF03772 Competence protein FDV79_06505 PF00753 Metallo-beta-lactamase superfamily FDV79_06505 PF13567 Domain of unknown function (DUF4131) FDV79_06510 PF00005 ABC transporter FDV79_06510 PF00664 ABC transporter transmembrane region FDV79_06515 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDV79_06520 PF03966 Trm112p-like protein FDV79_06525 PF02348 Cytidylyltransferase FDV79_06530 PF04293 SpoVR like protein FDV79_06535 PF04285 Protein of unknown function (DUF444) FDV79_06540 PF06798 PrkA serine protein kinase C-terminal domain FDV79_06540 PF08298 PrkA AAA domain FDV79_06550 PF03887 YfbU domain FDV79_06560 PF04055 Radical SAM superfamily FDV79_06570 PF02901 Pyruvate formate lyase-like FDV79_06570 PF01228 Glycine radical FDV79_06590 PF00005 ABC transporter FDV79_06595 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_06600 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_06605 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_06615 PF03372 Endonuclease/Exonuclease/phosphatase family FDV79_06620 PF10689 Protein of unknown function (DUF2496) FDV79_06625 PF07445 Primosomal replication protein priC FDV79_06630 PF01925 Sulfite exporter TauE/SafE FDV79_06635 PF06733 DEAD_2 FDV79_06635 PF13307 Helicase C-terminal domain FDV79_06645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV79_06650 PF00849 RNA pseudouridylate synthase FDV79_06655 PF03971 Monomeric isocitrate dehydrogenase FDV79_06660 PF00313 'Cold-shock' DNA-binding domain FDV79_06665 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDV79_06670 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_06670 PF07724 AAA domain (Cdc48 subfamily) FDV79_06670 PF17871 AAA lid domain FDV79_06670 PF02861 Clp amino terminal domain, pathogenicity island component FDV79_06670 PF10431 C-terminal, D2-small domain, of ClpB protein FDV79_06680 PF01176 Translation initiation factor 1A / IF-1 FDV79_06685 PF04376 Arginine-tRNA-protein transferase, N terminus FDV79_06685 PF04377 Arginine-tRNA-protein transferase, C terminus FDV79_06690 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDV79_06700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDV79_06705 PF10692 Protein of unknown function (DUF2498) FDV79_06710 PF01396 Topoisomerase DNA binding C4 zinc finger FDV79_06710 PF08272 Topoisomerase I zinc-ribbon-like FDV79_06710 PF01131 DNA topoisomerase FDV79_06710 PF01751 Toprim domain FDV79_06715 PF00483 Nucleotidyl transferase FDV79_06720 PF00534 Glycosyl transferases group 1 FDV79_06720 PF08323 Starch synthase catalytic domain FDV79_06740 PF04993 TfoX N-terminal domain FDV79_06740 PF04994 TfoX C-terminal domain FDV79_06745 PF00356 Bacterial regulatory proteins, lacI family FDV79_06750 PF02613 Nitrate reductase delta subunit FDV79_06755 PF00072 Response regulator receiver domain FDV79_06755 PF00486 Transcriptional regulatory protein, C terminal FDV79_06760 PF02698 DUF218 domain FDV79_06765 PF13847 Methyltransferase domain FDV79_06770 PF17192 MukF middle domain FDV79_06770 PF03882 MukF winged-helix domain FDV79_06770 PF17193 MukF C-terminal domain FDV79_06775 PF04288 MukE-like family FDV79_06780 PF04310 MukB N-terminal FDV79_06780 PF16330 MukB hinge domain FDV79_06790 PF08443 RimK-like ATP-grasp domain FDV79_06790 PF18030 RimK PreATP-grasp domain FDV79_06800 PF18030 RimK PreATP-grasp domain FDV79_06800 PF08443 RimK-like ATP-grasp domain FDV79_06810 PF08003 Protein of unknown function (DUF1698) FDV79_06815 PF13649 Methyltransferase domain FDV79_06820 PF01904 Protein of unknown function DUF72 FDV79_06825 PF01336 OB-fold nucleic acid binding domain FDV79_06825 PF00152 tRNA synthetases class II (D, K and N) FDV79_06825 PF02938 GAD domain FDV79_06830 PF02075 Crossover junction endodeoxyribonuclease RuvC FDV79_06835 PF00672 HAMP domain FDV79_06835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_06835 PF02203 Tar ligand binding domain homologue FDV79_06840 PF07499 RuvA, C-terminal domain FDV79_06840 PF01330 RuvA N terminal domain FDV79_06845 PF17864 RuvB AAA lid domain FDV79_06845 PF05491 RuvB C-terminal winged helix domain FDV79_06845 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDV79_06850 PF01654 Cytochrome bd terminal oxidase subunit I FDV79_06855 PF02322 Cytochrome bd terminal oxidase subunit II FDV79_06860 PF08173 Membrane bound YbgT-like protein FDV79_06870 PF03061 Thioesterase superfamily FDV79_06875 PF01618 MotA/TolQ/ExbB proton channel family FDV79_06880 PF02472 Biopolymer transport protein ExbD/TolR FDV79_06890 PF04052 TolB amino-terminal domain FDV79_06890 PF07676 WD40-like Beta Propeller Repeat FDV79_06895 PF00691 OmpA family FDV79_06900 PF13174 Tetratricopeptide repeat FDV79_06900 PF16331 TolA binding protein trimerisation FDV79_06905 PF02445 Quinolinate synthetase A protein FDV79_06915 PF03994 Domain of Unknown Function (DUF350) FDV79_06925 PF03738 Glutathionylspermidine synthase preATP-grasp FDV79_06935 PF00512 His Kinase A (phospho-acceptor) domain FDV79_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_06935 PF00072 Response regulator receiver domain FDV79_06935 PF09308 LuxQ, periplasmic FDV79_06940 PF06610 L-alanine exporter FDV79_06950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_06950 PF02743 Cache domain FDV79_06950 PF00672 HAMP domain FDV79_06965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_06965 PF00529 HlyD membrane-fusion protein of T1SS FDV79_06970 PF00873 AcrB/AcrD/AcrF family FDV79_06990 PF00579 tRNA synthetases class I (W and Y) FDV79_07000 PF03372 Endonuclease/Exonuclease/phosphatase family FDV79_07005 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDV79_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_07015 PF03466 LysR substrate binding domain FDV79_07025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDV79_07025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDV79_07030 PF01037 Lrp/AsnC ligand binding domain FDV79_07035 PF09397 Ftsk gamma domain FDV79_07035 PF01580 FtsK/SpoIIIE family FDV79_07035 PF17854 FtsK alpha domain FDV79_07035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDV79_07040 PF03548 Outer membrane lipoprotein carrier protein LolA FDV79_07045 PF12002 MgsA AAA+ ATPase C terminal FDV79_07045 PF16193 AAA C-terminal domain FDV79_07045 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_07050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV79_07050 PF02403 Seryl-tRNA synthetase N-terminal domain FDV79_07065 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDV79_07070 PF00202 Aminotransferase class-III FDV79_07075 PF04055 Radical SAM superfamily FDV79_07075 PF06968 Biotin and Thiamin Synthesis associated domain FDV79_07080 PF00155 Aminotransferase class I and II FDV79_07085 PF08241 Methyltransferase domain FDV79_07100 PF01435 Peptidase family M48 FDV79_07110 PF00106 short chain dehydrogenase FDV79_07150 PF00206 Lyase FDV79_07150 PF08328 Adenylosuccinate lyase C-terminal FDV79_07155 PF04356 Protein of unknown function (DUF489) FDV79_07170 PF00294 pfkB family carbohydrate kinase FDV79_07175 PF00816 H-NS histone family FDV79_07180 PF03553 Na+/H+ antiporter family FDV79_07190 PF00158 Sigma-54 interaction domain FDV79_07190 PF00072 Response regulator receiver domain FDV79_07190 PF02954 Bacterial regulatory protein, Fis family FDV79_07195 PF01634 ATP phosphoribosyltransferase FDV79_07195 PF08029 HisG, C-terminal domain FDV79_07200 PF00815 Histidinol dehydrogenase FDV79_07205 PF00155 Aminotransferase class I and II FDV79_07210 PF08645 Polynucleotide kinase 3 phosphatase FDV79_07210 PF00475 Imidazoleglycerol-phosphate dehydratase FDV79_07215 PF00117 Glutamine amidotransferase class-I FDV79_07220 PF00977 Histidine biosynthesis protein FDV79_07225 PF00977 Histidine biosynthesis protein FDV79_07230 PF01502 Phosphoribosyl-AMP cyclohydrolase FDV79_07230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FDV79_07235 PF02810 SEC-C motif FDV79_07245 PF08668 HDOD domain FDV79_07245 PF00563 EAL domain FDV79_07250 PF00149 Calcineurin-like phosphoesterase FDV79_07255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV79_07260 PF01406 tRNA synthetases class I (C) catalytic domain FDV79_07260 PF09190 DALR domain FDV79_07265 PF00265 Thymidine kinase FDV79_07270 PF02698 DUF218 domain FDV79_07295 PF01226 Formate/nitrite transporter FDV79_07305 PF03649 Uncharacterised protein family (UPF0014) FDV79_07310 PF06796 Periplasmic nitrate reductase protein NapE FDV79_07315 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV79_07320 PF00384 Molybdopterin oxidoreductase FDV79_07320 PF18364 Molybdopterin oxidoreductase N-terminal domain FDV79_07320 PF01568 Molydopterin dinucleotide binding domain FDV79_07325 PF16875 Glycosyl hydrolase family 36 N-terminal domain FDV79_07325 PF16874 Glycosyl hydrolase family 36 C-terminal domain FDV79_07335 PF01368 DHH family FDV79_07335 PF02833 DHHA2 domain FDV79_07345 PF00005 ABC transporter FDV79_07350 PF00005 ABC transporter FDV79_07350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_07355 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_07355 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_07360 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_07365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_07370 PF00158 Sigma-54 interaction domain FDV79_07370 PF02954 Bacterial regulatory protein, Fis family FDV79_07375 PF04012 PspA/IM30 family FDV79_07380 PF06667 Phage shock protein B FDV79_07385 PF04024 PspC domain FDV79_07390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_07395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_07400 PF00873 AcrB/AcrD/AcrF family FDV79_07405 PF03352 Methyladenine glycosylase FDV79_07410 PF03280 Proteobacterial lipase chaperone protein FDV79_07415 PF00561 alpha/beta hydrolase fold FDV79_07420 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV79_07425 PF13091 PLD-like domain FDV79_07425 PF13396 Phospholipase_D-nuclease N-terminal FDV79_07430 PF00209 Sodium:neurotransmitter symporter family FDV79_07435 PF12729 Four helix bundle sensory module for signal transduction FDV79_07435 PF00672 HAMP domain FDV79_07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_07440 PF00849 RNA pseudouridylate synthase FDV79_07450 PF00970 Oxidoreductase FAD-binding domain FDV79_07450 PF00175 Oxidoreductase NAD-binding domain FDV79_07450 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_07455 PF03063 Prismane/CO dehydrogenase family FDV79_07460 PF01590 GAF domain FDV79_07460 PF00158 Sigma-54 interaction domain FDV79_07475 PF01066 CDP-alcohol phosphatidyltransferase FDV79_07480 PF00005 ABC transporter FDV79_07485 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_07490 PF13416 Bacterial extracellular solute-binding protein FDV79_07495 PF09335 SNARE associated Golgi protein FDV79_07505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDV79_07505 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_07515 PF00512 His Kinase A (phospho-acceptor) domain FDV79_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_07520 PF00072 Response regulator receiver domain FDV79_07520 PF00196 Bacterial regulatory proteins, luxR family FDV79_07530 PF06945 Protein of unknown function (DUF1289) FDV79_07545 PF02872 5'-nucleotidase, C-terminal domain FDV79_07545 PF00149 Calcineurin-like phosphoesterase FDV79_07560 PF01386 Ribosomal L25p family FDV79_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_07565 PF00672 HAMP domain FDV79_07565 PF00512 His Kinase A (phospho-acceptor) domain FDV79_07570 PF00486 Transcriptional regulatory protein, C terminal FDV79_07570 PF00072 Response regulator receiver domain FDV79_07580 PF04851 Type III restriction enzyme, res subunit FDV79_07580 PF00271 Helicase conserved C-terminal domain FDV79_07585 PF01479 S4 domain FDV79_07585 PF00849 RNA pseudouridylate synthase FDV79_07590 PF07690 Major Facilitator Superfamily FDV79_07605 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FDV79_07620 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV79_07625 PF13460 NAD(P)H-binding FDV79_07625 PF11066 Protein of unknown function (DUF2867) FDV79_07630 PF01554 MatE FDV79_07635 PF00005 ABC transporter FDV79_07650 PF06965 Na+/H+ antiporter 1 FDV79_07655 PF00440 Bacterial regulatory proteins, tetR family FDV79_07655 PF16295 Tetracyclin repressor-like, C-terminal domain FDV79_07660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_07660 PF09317 Domain of unknown function (DUF1974) FDV79_07660 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_07660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_07665 PF07055 Enoyl reductase FAD binding domain FDV79_07665 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDV79_07665 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDV79_07670 PF02080 TrkA-C domain FDV79_07670 PF06826 Predicted Permease Membrane Region FDV79_07675 PF00462 Glutaredoxin FDV79_07685 PF00465 Iron-containing alcohol dehydrogenase FDV79_07690 PF01418 Helix-turn-helix domain, rpiR family FDV79_07690 PF01380 SIS domain FDV79_07695 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDV79_07705 PF03956 Lysine exporter LysO FDV79_07725 PF04994 TfoX C-terminal domain FDV79_07725 PF04993 TfoX N-terminal domain FDV79_07740 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_07740 PF00512 His Kinase A (phospho-acceptor) domain FDV79_07750 PF00266 Aminotransferase class-V FDV79_07755 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_07760 PF00005 ABC transporter FDV79_07760 PF00664 ABC transporter transmembrane region FDV79_07765 PF00005 ABC transporter FDV79_07765 PF00664 ABC transporter transmembrane region FDV79_07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_07780 PF00266 Aminotransferase class-V FDV79_07790 PF00990 Diguanylate cyclase, GGDEF domain FDV79_07790 PF00072 Response regulator receiver domain FDV79_07795 PF00939 Sodium:sulfate symporter transmembrane region FDV79_07800 PF02698 DUF218 domain FDV79_07805 PF03949 Malic enzyme, NAD binding domain FDV79_07805 PF00390 Malic enzyme, N-terminal domain FDV79_07810 PF00270 DEAD/DEAH box helicase FDV79_07810 PF04408 Helicase associated domain (HA2) FDV79_07810 PF08482 ATP-dependent helicase C-terminal FDV79_07810 PF00271 Helicase conserved C-terminal domain FDV79_07815 PF02253 Phospholipase A1 FDV79_07825 PF09423 PhoD-like phosphatase FDV79_07825 PF16655 PhoD-like phosphatase, N-terminal domain FDV79_07830 PF01259 SAICAR synthetase FDV79_07850 PF00691 OmpA family FDV79_07850 PF05736 OprF membrane domain FDV79_07865 PF02913 FAD linked oxidases, C-terminal domain FDV79_07865 PF01565 FAD binding domain FDV79_07865 PF13183 4Fe-4S dicluster domain FDV79_07870 PF04191 Phospholipid methyltransferase FDV79_07880 PF00221 Aromatic amino acid lyase FDV79_07885 PF01175 Urocanase Rossmann-like domain FDV79_07885 PF17392 Urocanase C-terminal domain FDV79_07885 PF17391 Urocanase N-terminal domain FDV79_07890 PF00491 Arginase family FDV79_07895 PF01979 Amidohydrolase family FDV79_07900 PF07702 UTRA domain FDV79_07900 PF00392 Bacterial regulatory proteins, gntR family FDV79_07915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV79_07915 PF03129 Anticodon binding domain FDV79_07915 PF02824 TGS domain FDV79_07915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV79_07920 PF05198 Translation initiation factor IF-3, N-terminal domain FDV79_07920 PF00707 Translation initiation factor IF-3, C-terminal domain FDV79_07925 PF01632 Ribosomal protein L35 FDV79_07930 PF00453 Ribosomal protein L20 FDV79_07935 PF01906 Putative heavy-metal-binding FDV79_07965 PF00990 Diguanylate cyclase, GGDEF domain FDV79_07965 PF17158 Membrane-associated sensor, integral membrane domain FDV79_07970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDV79_07970 PF01409 tRNA synthetases class II core domain (F) FDV79_07975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FDV79_07975 PF01588 Putative tRNA binding domain FDV79_07975 PF03147 Ferredoxin-fold anticodon binding domain FDV79_07975 PF03484 tRNA synthetase B5 domain FDV79_07975 PF03483 B3/4 domain FDV79_07990 PF00216 Bacterial DNA-binding protein FDV79_08000 PF05724 Thiopurine S-methyltransferase (TPMT) FDV79_08005 PF02222 ATP-grasp domain FDV79_08010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV79_08010 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FDV79_08015 PF04172 LrgB-like family FDV79_08020 PF03788 LrgA family FDV79_08025 PF00929 Exonuclease FDV79_08025 PF08411 Exonuclease C-terminal FDV79_08035 PF13460 NAD(P)H-binding FDV79_08040 PF02277 Phosphoribosyltransferase FDV79_08045 PF02654 Cobalamin-5-phosphate synthase FDV79_08050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDV79_08070 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDV79_08075 PF01032 FecCD transport family FDV79_08080 PF00005 ABC transporter FDV79_08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_08100 PF03466 LysR substrate binding domain FDV79_08120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDV79_08125 PF16363 GDP-mannose 4,6 dehydratase FDV79_08130 PF04991 LicD family FDV79_08135 PF01863 Protein of unknown function DUF45 FDV79_08140 PF05971 RNA methyltransferase FDV79_08160 PF00392 Bacterial regulatory proteins, gntR family FDV79_08165 PF00171 Aldehyde dehydrogenase family FDV79_08170 PF05544 Proline racemase FDV79_08190 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDV79_08195 PF00701 Dihydrodipicolinate synthetase family FDV79_08200 PF00005 ABC transporter FDV79_08200 PF08402 TOBE domain FDV79_08205 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_08210 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_08225 PF08453 Peptidase family M9 N-terminal FDV79_08225 PF01752 Collagenase FDV79_08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_08240 PF00005 ABC transporter FDV79_08245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_08245 PF00005 ABC transporter FDV79_08250 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_08250 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_08255 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_08260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_08265 PF07687 Peptidase dimerisation domain FDV79_08265 PF01546 Peptidase family M20/M25/M40 FDV79_08275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_08280 PF04209 homogentisate 1,2-dioxygenase FDV79_08290 PF02798 Glutathione S-transferase, N-terminal domain FDV79_08290 PF14497 Glutathione S-transferase, C-terminal domain FDV79_08335 PF13533 Biotin-lipoyl like FDV79_08350 PF08543 Phosphomethylpyrimidine kinase FDV79_08355 PF03466 LysR substrate binding domain FDV79_08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_08370 PF00300 Histidine phosphatase superfamily (branch 1) FDV79_08385 PF00939 Sodium:sulfate symporter transmembrane region FDV79_08390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_08390 PF00512 His Kinase A (phospho-acceptor) domain FDV79_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_08395 PF00072 Response regulator receiver domain FDV79_08395 PF00158 Sigma-54 interaction domain FDV79_08395 PF02954 Bacterial regulatory protein, Fis family FDV79_08400 PF00563 EAL domain FDV79_08400 PF00990 Diguanylate cyclase, GGDEF domain FDV79_08400 PF03707 Bacterial signalling protein N terminal repeat FDV79_08405 PF01966 HD domain FDV79_08405 PF11871 Domain of unknown function (DUF3391) FDV79_08410 PF01810 LysE type translocator FDV79_08415 PF11230 Protein of unknown function (DUF3029) FDV79_08420 PF04055 Radical SAM superfamily FDV79_08430 PF03741 Integral membrane protein TerC family FDV79_08440 PF01476 LysM domain FDV79_08440 PF08525 Opacity-associated protein A N-terminal motif FDV79_08440 PF01551 Peptidase family M23 FDV79_08465 PF00158 Sigma-54 interaction domain FDV79_08465 PF02954 Bacterial regulatory protein, Fis family FDV79_08470 PF07724 AAA domain (Cdc48 subfamily) FDV79_08470 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_08470 PF10431 C-terminal, D2-small domain, of ClpB protein FDV79_08470 PF17871 AAA lid domain FDV79_08475 PF05638 Type VI secretion system effector, Hcp FDV79_08480 PF04717 Type VI secretion system, phage-baseplate injector FDV79_08505 PF00069 Protein kinase domain FDV79_08540 PF01037 Lrp/AsnC ligand binding domain FDV79_08615 PF01966 HD domain FDV79_08625 PF00465 Iron-containing alcohol dehydrogenase FDV79_08630 PF03222 Tryptophan/tyrosine permease family FDV79_08655 PF00664 ABC transporter transmembrane region FDV79_08655 PF00005 ABC transporter FDV79_08660 PF00664 ABC transporter transmembrane region FDV79_08660 PF00005 ABC transporter FDV79_08690 PF00012 Hsp70 protein FDV79_08695 PF00012 Hsp70 protein FDV79_08705 PF17158 Membrane-associated sensor, integral membrane domain FDV79_08705 PF00990 Diguanylate cyclase, GGDEF domain FDV79_08735 PF01568 Molydopterin dinucleotide binding domain FDV79_08735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_08735 PF00384 Molybdopterin oxidoreductase FDV79_08740 PF13247 4Fe-4S dicluster domain FDV79_08740 PF12800 4Fe-4S binding domain FDV79_08745 PF04976 DMSO reductase anchor subunit (DmsC) FDV79_08750 PF02613 Nitrate reductase delta subunit FDV79_08755 PF12838 4Fe-4S dicluster domain FDV79_08755 PF00037 4Fe-4S binding domain FDV79_08760 PF02525 Flavodoxin-like fold FDV79_08765 PF00270 DEAD/DEAH box helicase FDV79_08765 PF11898 Domain of unknown function (DUF3418) FDV79_08765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDV79_08765 PF00271 Helicase conserved C-terminal domain FDV79_08765 PF04408 Helicase associated domain (HA2) FDV79_08780 PF02028 BCCT, betaine/carnitine/choline family transporter FDV79_08790 PF02397 Bacterial sugar transferase FDV79_08795 PF00535 Glycosyl transferase family 2 FDV79_08800 PF13439 Glycosyltransferase Family 4 FDV79_08800 PF00534 Glycosyl transferases group 1 FDV79_08835 PF13439 Glycosyltransferase Family 4 FDV79_08835 PF00534 Glycosyl transferases group 1 FDV79_08845 PF00158 Sigma-54 interaction domain FDV79_08845 PF02954 Bacterial regulatory protein, Fis family FDV79_08845 PF00072 Response regulator receiver domain FDV79_08865 PF10531 SLBB domain FDV79_08865 PF02563 Polysaccharide biosynthesis/export protein FDV79_08875 PF01740 STAS domain FDV79_08880 PF14743 DNA ligase OB-like domain FDV79_08880 PF01068 ATP dependent DNA ligase domain FDV79_08890 PF01554 MatE FDV79_08895 PF00677 Lumazine binding domain FDV79_08905 PF03881 Fructosamine kinase FDV79_08910 PF00072 Response regulator receiver domain FDV79_08910 PF01339 CheB methylesterase FDV79_08915 PF05230 MASE2 domain FDV79_08915 PF00990 Diguanylate cyclase, GGDEF domain FDV79_08925 PF00877 NlpC/P60 family FDV79_08930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_08930 PF00672 HAMP domain FDV79_08930 PF12729 Four helix bundle sensory module for signal transduction FDV79_08970 PF00480 ROK family FDV79_08980 PF00994 Probable molybdopterin binding domain FDV79_08980 PF03453 MoeA N-terminal region (domain I and II) FDV79_08980 PF03454 MoeA C-terminal region (domain IV) FDV79_08985 PF12804 MobA-like NTP transferase domain FDV79_08990 PF08402 TOBE domain FDV79_08990 PF00005 ABC transporter FDV79_08995 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_09000 PF12849 PBP superfamily domain FDV79_09010 PF00158 Sigma-54 interaction domain FDV79_09010 PF00072 Response regulator receiver domain FDV79_09010 PF02954 Bacterial regulatory protein, Fis family FDV79_09015 PF00512 His Kinase A (phospho-acceptor) domain FDV79_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_09025 PF12848 ABC transporter FDV79_09025 PF00005 ABC transporter FDV79_09030 PF02634 FdhD/NarQ family FDV79_09055 PF02613 Nitrate reductase delta subunit FDV79_09065 PF01568 Molydopterin dinucleotide binding domain FDV79_09065 PF00384 Molybdopterin oxidoreductase FDV79_09065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_09070 PF13247 4Fe-4S dicluster domain FDV79_09085 PF03527 RHS protein FDV79_09085 PF05593 RHS Repeat FDV79_09135 PF00909 Ammonium Transporter Family FDV79_09145 PF02146 Sir2 family FDV79_09150 PF13416 Bacterial extracellular solute-binding protein FDV79_09155 PF13416 Bacterial extracellular solute-binding protein FDV79_09160 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_09165 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_09170 PF08402 TOBE domain FDV79_09170 PF00005 ABC transporter FDV79_09190 PF01171 PP-loop family FDV79_09200 PF00582 Universal stress protein family FDV79_09205 PF13545 Crp-like helix-turn-helix domain FDV79_09205 PF00027 Cyclic nucleotide-binding domain FDV79_09220 PF00403 Heavy-metal-associated domain FDV79_09230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV79_09230 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FDV79_09245 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV79_09260 PF09308 LuxQ, periplasmic FDV79_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_09260 PF00072 Response regulator receiver domain FDV79_09260 PF00512 His Kinase A (phospho-acceptor) domain FDV79_09270 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FDV79_09405 PF17414 MatP C-terminal ribbon-helix-helix domain FDV79_09405 PF06303 MatP N-terminal domain FDV79_09410 PF13654 AAA domain FDV79_09410 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV79_09415 PF07977 FabA-like domain FDV79_09420 PF04957 Ribosome modulation factor FDV79_09440 PF10672 S-adenosylmethionine-dependent methyltransferase FDV79_09440 PF01170 Putative RNA methylase family UPF0020 FDV79_09440 PF02926 THUMP domain FDV79_09450 PF07126 Cell-division protein ZapC FDV79_09455 PF01180 Dihydroorotate dehydrogenase FDV79_09460 PF05088 Bacterial NAD-glutamate dehydrogenase FDV79_09470 PF01433 Peptidase family M1 domain FDV79_09470 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDV79_09470 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDV79_09480 PF00595 PDZ domain FDV79_09480 PF11818 C-terminal domain of tail specific protease (DUF3340) FDV79_09480 PF03572 Peptidase family S41 FDV79_09480 PF17804 Tail specific protease N-terminal domain FDV79_09485 PF17516 ProQ C-terminal domain FDV79_09485 PF04352 ProQ/FINO family FDV79_09490 PF13185 GAF domain FDV79_09495 PF00005 ABC transporter FDV79_09495 PF00664 ABC transporter transmembrane region FDV79_09500 PF04403 Paraquat-inducible protein A FDV79_09520 PF01189 16S rRNA methyltransferase RsmB/F FDV79_09520 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FDV79_09520 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FDV79_09540 PF00793 DAHP synthetase I family FDV79_09545 PF04461 Protein of unknown function (DUF520) FDV79_09555 PF14824 Sirohaem biosynthesis protein central FDV79_09555 PF10414 Sirohaem synthase dimerisation region FDV79_09555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV79_09565 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_09570 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_09575 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_09580 PF00005 ABC transporter FDV79_09585 PF01027 Inhibitor of apoptosis-promoting Bax1 FDV79_09595 PF04358 DsrC like protein FDV79_09600 PF00708 Acylphosphatase FDV79_09605 PF00672 HAMP domain FDV79_09605 PF02743 Cache domain FDV79_09605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_09610 PF17785 PUA-like domain FDV79_09610 PF10672 S-adenosylmethionine-dependent methyltransferase FDV79_09625 PF05736 OprF membrane domain FDV79_09625 PF00691 OmpA family FDV79_09640 PF05736 OprF membrane domain FDV79_09640 PF00691 OmpA family FDV79_09650 PF00990 Diguanylate cyclase, GGDEF domain FDV79_09650 PF17158 Membrane-associated sensor, integral membrane domain FDV79_09655 PF06508 Queuosine biosynthesis protein QueC FDV79_09660 PF04055 Radical SAM superfamily FDV79_09675 PF00089 Trypsin FDV79_09685 PF13193 AMP-binding enzyme C-terminal domain FDV79_09685 PF00501 AMP-binding enzyme FDV79_09685 PF16177 Acetyl-coenzyme A synthetase N-terminus FDV79_09690 PF04303 PrpF protein FDV79_09695 PF00694 Aconitase C-terminal domain FDV79_09695 PF00330 Aconitase family (aconitate hydratase) FDV79_09700 PF00285 Citrate synthase, C-terminal domain FDV79_09730 PF01970 Tripartite tricarboxylate transporter TctA family FDV79_09735 PF01925 Sulfite exporter TauE/SafE FDV79_09745 PF05844 YopD protein FDV79_09755 PF07720 Tetratricopeptide repeat FDV79_09760 PF04792 V antigen (LcrV) protein FDV79_09765 PF07216 LcrG protein FDV79_09770 PF09621 Type III secretion system regulator (LcrR) FDV79_09775 PF00771 FHIPEP family FDV79_09795 PF09059 TyeA FDV79_09800 PF07201 HrpJ-like domain FDV79_09805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_09805 PF18269 T3SS EscN ATPase C-terminal domain FDV79_09805 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDV79_09820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV79_09825 PF00813 FliP family FDV79_09830 PF01313 Bacterial export proteins, family 3 FDV79_09835 PF01311 Bacterial export proteins, family 1 FDV79_09840 PF01312 FlhB HrpN YscU SpaS Family FDV79_09845 PF03466 LysR substrate binding domain FDV79_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_09850 PF12146 Serine aminopeptidase, S33 FDV79_09855 PF12146 Serine aminopeptidase, S33 FDV79_09895 PF02661 Fic/DOC family FDV79_09905 PF02108 Flagellar assembly protein FliH FDV79_09915 PF01514 Secretory protein of YscJ/FliF family FDV79_09920 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI FDV79_09930 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) FDV79_09935 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FDV79_09945 PF16697 Inner membrane component of T3SS, cytoplasmic domain FDV79_09945 PF16693 Inner membrane component of T3SS, periplasmic domain FDV79_09950 PF00263 Bacterial type II and III secretion system protein FDV79_09950 PF03958 Bacterial type II/III secretion system short domain FDV79_09965 PF12833 Helix-turn-helix domain FDV79_09985 PF00171 Aldehyde dehydrogenase family FDV79_09990 PF00158 Sigma-54 interaction domain FDV79_09990 PF02954 Bacterial regulatory protein, Fis family FDV79_09990 PF01590 GAF domain FDV79_10015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV79_10015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FDV79_10020 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDV79_10025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FDV79_10025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FDV79_10030 PF00072 Response regulator receiver domain FDV79_10030 PF12431 Transcriptional regulator FDV79_10035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_10035 PF00989 PAS fold FDV79_10035 PF17203 Single cache domain 3 FDV79_10035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDV79_10050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_10065 PF00034 Cytochrome c FDV79_10065 PF03150 Di-haem cytochrome c peroxidase FDV79_10070 PF00696 Amino acid kinase family FDV79_10070 PF13840 ACT domain FDV79_10075 PF06339 Ectoine synthase FDV79_10080 PF00202 Aminotransferase class-III FDV79_10085 PF00583 Acetyltransferase (GNAT) family FDV79_10090 PF02028 BCCT, betaine/carnitine/choline family transporter FDV79_10105 PF00571 CBS domain FDV79_10105 PF00005 ABC transporter FDV79_10110 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_10115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDV79_10125 PF00501 AMP-binding enzyme FDV79_10145 PF00072 Response regulator receiver domain FDV79_10145 PF00486 Transcriptional regulatory protein, C terminal FDV79_10150 PF00512 His Kinase A (phospho-acceptor) domain FDV79_10150 PF08521 Two-component sensor kinase N-terminal FDV79_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_10155 PF00884 Sulfatase FDV79_10180 PF01235 Sodium:alanine symporter family FDV79_10190 PF01810 LysE type translocator FDV79_10195 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FDV79_10200 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV79_10210 PF13520 Amino acid permease FDV79_10225 PF04204 Homoserine O-succinyltransferase FDV79_10240 PF00563 EAL domain FDV79_10240 PF00990 Diguanylate cyclase, GGDEF domain FDV79_10240 PF03707 Bacterial signalling protein N terminal repeat FDV79_10245 PF00672 HAMP domain FDV79_10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_10245 PF00512 His Kinase A (phospho-acceptor) domain FDV79_10245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV79_10245 PF00072 Response regulator receiver domain FDV79_10245 PF01627 Hpt domain FDV79_10260 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_10260 PF12464 Maltose acetyltransferase FDV79_10270 PF01928 CYTH domain FDV79_10280 PF04237 YjbR FDV79_10285 PF01047 MarR family FDV79_10295 PF12833 Helix-turn-helix domain FDV79_10300 PF01411 tRNA synthetases class II (A) FDV79_10300 PF02272 DHHA1 domain FDV79_10300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV79_10315 PF00563 EAL domain FDV79_10315 PF00196 Bacterial regulatory proteins, luxR family FDV79_10325 PF02833 DHHA2 domain FDV79_10325 PF01368 DHH family FDV79_10330 PF00202 Aminotransferase class-III FDV79_10335 PF00171 Aldehyde dehydrogenase family FDV79_10340 PF04371 Porphyromonas-type peptidyl-arginine deiminase FDV79_10345 PF00795 Carbon-nitrogen hydrolase FDV79_10350 PF01266 FAD dependent oxidoreductase FDV79_10355 PF00171 Aldehyde dehydrogenase family FDV79_10360 PF01381 Helix-turn-helix FDV79_10360 PF07883 Cupin domain FDV79_10365 PF07722 Peptidase C26 FDV79_10375 PF00120 Glutamine synthetase, catalytic domain FDV79_10380 PF03553 Na+/H+ antiporter family FDV79_10400 PF13302 Acetyltransferase (GNAT) domain FDV79_10405 PF01810 LysE type translocator FDV79_10430 PF13333 Integrase core domain FDV79_10430 PF13276 HTH-like domain FDV79_10430 PF00665 Integrase core domain FDV79_10480 PF13333 Integrase core domain FDV79_10480 PF13276 HTH-like domain FDV79_10480 PF00665 Integrase core domain FDV79_10495 PF00665 Integrase core domain FDV79_10495 PF13333 Integrase core domain FDV79_10495 PF13276 HTH-like domain FDV79_10515 PF13276 HTH-like domain FDV79_10515 PF00665 Integrase core domain FDV79_10515 PF13333 Integrase core domain FDV79_10550 PF13333 Integrase core domain FDV79_10550 PF00665 Integrase core domain FDV79_10550 PF13276 HTH-like domain FDV79_10590 PF13344 Haloacid dehalogenase-like hydrolase FDV79_10590 PF00293 NUDIX domain FDV79_10605 PF13614 AAA domain FDV79_10630 PF00665 Integrase core domain FDV79_10630 PF13333 Integrase core domain FDV79_10630 PF13276 HTH-like domain FDV79_10700 PF13333 Integrase core domain FDV79_10700 PF13276 HTH-like domain FDV79_10700 PF00665 Integrase core domain FDV79_10750 PF13333 Integrase core domain FDV79_10750 PF00665 Integrase core domain FDV79_10750 PF13276 HTH-like domain FDV79_10815 PF13333 Integrase core domain FDV79_10815 PF00665 Integrase core domain FDV79_10815 PF13276 HTH-like domain FDV79_10830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_10835 PF00665 Integrase core domain FDV79_10835 PF13276 HTH-like domain FDV79_10835 PF13333 Integrase core domain FDV79_10870 PF13333 Integrase core domain FDV79_10870 PF13276 HTH-like domain FDV79_10870 PF00665 Integrase core domain FDV79_10990 PF00665 Integrase core domain FDV79_10990 PF13333 Integrase core domain FDV79_10990 PF13276 HTH-like domain FDV79_11050 PF13333 Integrase core domain FDV79_11050 PF00665 Integrase core domain FDV79_11050 PF13276 HTH-like domain FDV79_11115 PF13276 HTH-like domain FDV79_11115 PF00665 Integrase core domain FDV79_11115 PF13333 Integrase core domain FDV79_11150 PF00583 Acetyltransferase (GNAT) family FDV79_11180 PF00075 RNase H FDV79_11315 PF00665 Integrase core domain FDV79_11315 PF13333 Integrase core domain FDV79_11315 PF13276 HTH-like domain FDV79_11355 PF13333 Integrase core domain FDV79_11355 PF00665 Integrase core domain FDV79_11355 PF13276 HTH-like domain FDV79_11395 PF08378 Nuclease-related domain FDV79_11470 PF07516 SecA Wing and Scaffold domain FDV79_11470 PF01043 SecA preprotein cross-linking domain FDV79_11470 PF02810 SEC-C motif FDV79_11470 PF07517 SecA DEAD-like domain FDV79_11495 PF13333 Integrase core domain FDV79_11495 PF00665 Integrase core domain FDV79_11495 PF13276 HTH-like domain FDV79_11590 PF13344 Haloacid dehalogenase-like hydrolase FDV79_11590 PF00293 NUDIX domain FDV79_11605 PF00665 Integrase core domain FDV79_11605 PF13276 HTH-like domain FDV79_11605 PF13333 Integrase core domain FDV79_11680 PF13276 HTH-like domain FDV79_11680 PF00665 Integrase core domain FDV79_11680 PF13333 Integrase core domain FDV79_11710 PF13495 Phage integrase, N-terminal SAM-like domain FDV79_11710 PF00589 Phage integrase family FDV79_11725 PF13302 Acetyltransferase (GNAT) domain FDV79_11730 PF00158 Sigma-54 interaction domain FDV79_11730 PF18024 Helix-turn-helix domain FDV79_11735 PF05128 Domain of unknown function (DUF697) FDV79_11740 PF04317 YcjX-like family, DUF463 FDV79_11760 PF00425 chorismate binding enzyme FDV79_11760 PF04715 Anthranilate synthase component I, N terminal region FDV79_11765 PF09308 LuxQ, periplasmic FDV79_11765 PF00512 His Kinase A (phospho-acceptor) domain FDV79_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_11765 PF00072 Response regulator receiver domain FDV79_11775 PF00293 NUDIX domain FDV79_11780 PF03222 Tryptophan/tyrosine permease family FDV79_11785 PF03315 Serine dehydratase beta chain FDV79_11785 PF03313 Serine dehydratase alpha chain FDV79_11790 PF00563 EAL domain FDV79_11790 PF04940 Sensors of blue-light using FAD FDV79_11800 PF01242 6-pyruvoyl tetrahydropterin synthase FDV79_11830 PF00313 'Cold-shock' DNA-binding domain FDV79_11835 PF08206 Ribonuclease B OB domain FDV79_11835 PF00773 RNB domain FDV79_11835 PF17876 Cold shock domain FDV79_11835 PF08461 Ribonuclease R winged-helix domain FDV79_11835 PF00575 S1 RNA binding domain FDV79_11850 PF12729 Four helix bundle sensory module for signal transduction FDV79_11850 PF00672 HAMP domain FDV79_11850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_11855 PF00152 tRNA synthetases class II (D, K and N) FDV79_11855 PF01336 OB-fold nucleic acid binding domain FDV79_11865 PF00392 Bacterial regulatory proteins, gntR family FDV79_11865 PF00155 Aminotransferase class I and II FDV79_11890 PF00155 Aminotransferase class I and II FDV79_11910 PF00672 HAMP domain FDV79_11910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_11915 PF02028 BCCT, betaine/carnitine/choline family transporter FDV79_11920 PF01047 MarR family FDV79_11925 PF00072 Response regulator receiver domain FDV79_11925 PF00196 Bacterial regulatory proteins, luxR family FDV79_11930 PF17200 Single Cache domain 2 FDV79_11930 PF07730 Histidine kinase FDV79_11935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDV79_11945 PF03480 Bacterial extracellular solute-binding protein, family 7 FDV79_11960 PF00753 Metallo-beta-lactamase superfamily FDV79_11965 PF05951 Bacterial protein of unknown function (DUF882) FDV79_11970 PF01471 Putative peptidoglycan binding domain FDV79_11970 PF03734 L,D-transpeptidase catalytic domain FDV79_11995 PF00925 GTP cyclohydrolase II FDV79_12005 PF03918 Cytochrome C biogenesis protein FDV79_12010 PF08534 Redoxin FDV79_12015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDV79_12015 PF01578 Cytochrome C assembly protein FDV79_12020 PF03916 Polysulphide reductase, NrfD FDV79_12025 PF13247 4Fe-4S dicluster domain FDV79_12035 PF02335 Cytochrome c552 FDV79_12050 PF03989 DNA gyrase C-terminal domain, beta-propeller FDV79_12050 PF00521 DNA gyrase/topoisomerase IV, subunit A FDV79_12060 PF03477 ATP cone domain FDV79_12060 PF00317 Ribonucleotide reductase, all-alpha domain FDV79_12060 PF02867 Ribonucleotide reductase, barrel domain FDV79_12065 PF00268 Ribonucleotide reductase, small chain FDV79_12075 PF00994 Probable molybdopterin binding domain FDV79_12090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV79_12095 PF16653 Saccharopine dehydrogenase C-terminal domain FDV79_12095 PF03435 Saccharopine dehydrogenase NADP binding domain FDV79_12100 PF00202 Aminotransferase class-III FDV79_12125 PF01066 CDP-alcohol phosphatidyltransferase FDV79_12130 PF02151 UvrB/uvrC motif FDV79_12130 PF01541 GIY-YIG catalytic domain FDV79_12130 PF08459 UvrC Helix-hairpin-helix N-terminal FDV79_12135 PF00072 Response regulator receiver domain FDV79_12135 PF00196 Bacterial regulatory proteins, luxR family FDV79_12140 PF00136 DNA polymerase family B FDV79_12140 PF03104 DNA polymerase family B, exonuclease domain FDV79_12150 PF09285 Elongation factor P, C-terminal FDV79_12150 PF08207 Elongation factor P (EF-P) KOW-like domain FDV79_12150 PF01132 Elongation factor P (EF-P) OB domain FDV79_12155 PF04269 Protein of unknown function, DUF440 FDV79_12165 PF01479 S4 domain FDV79_12165 PF00849 RNA pseudouridylate synthase FDV79_12175 PF01300 Telomere recombination FDV79_12180 PF02811 PHP domain FDV79_12185 PF08056 Tryptophan operon leader peptide FDV79_12190 PF04715 Anthranilate synthase component I, N terminal region FDV79_12190 PF00425 chorismate binding enzyme FDV79_12195 PF00117 Glutamine amidotransferase class-I FDV79_12200 PF02885 Glycosyl transferase family, helical bundle domain FDV79_12200 PF00591 Glycosyl transferase family, a/b domain FDV79_12205 PF00218 Indole-3-glycerol phosphate synthase FDV79_12205 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDV79_12210 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_12215 PF00290 Tryptophan synthase alpha chain FDV79_12225 PF13545 Crp-like helix-turn-helix domain FDV79_12225 PF00027 Cyclic nucleotide-binding domain FDV79_12230 PF00501 AMP-binding enzyme FDV79_12230 PF13193 AMP-binding enzyme C-terminal domain FDV79_12240 PF00375 Sodium:dicarboxylate symporter family FDV79_12245 PF17327 Acyl homoserine lactone synthase FDV79_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_12250 PF00072 Response regulator receiver domain FDV79_12260 PF04279 Intracellular septation protein A FDV79_12265 PF03061 Thioesterase superfamily FDV79_12270 PF03795 YCII-related domain FDV79_12280 PF01717 Cobalamin-independent synthase, Catalytic domain FDV79_12280 PF08267 Cobalamin-independent synthase, N-terminal domain FDV79_12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_12290 PF03466 LysR substrate binding domain FDV79_12305 PF00990 Diguanylate cyclase, GGDEF domain FDV79_12305 PF00360 Phytochrome region FDV79_12305 PF01590 GAF domain FDV79_12305 PF00563 EAL domain FDV79_12310 PF08497 Radical SAM N-terminal FDV79_12310 PF04055 Radical SAM superfamily FDV79_12310 PF11842 Domain of unknown function (DUF3362) FDV79_12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_12315 PF00672 HAMP domain FDV79_12325 PF00486 Transcriptional regulatory protein, C terminal FDV79_12325 PF00072 Response regulator receiver domain FDV79_12330 PF00512 His Kinase A (phospho-acceptor) domain FDV79_12330 PF00672 HAMP domain FDV79_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_12350 PF03466 LysR substrate binding domain FDV79_12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_12355 PF00529 HlyD membrane-fusion protein of T1SS FDV79_12355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_12365 PF01717 Cobalamin-independent synthase, Catalytic domain FDV79_12365 PF08267 Cobalamin-independent synthase, N-terminal domain FDV79_12375 PF12833 Helix-turn-helix domain FDV79_12375 PF02311 AraC-like ligand binding domain FDV79_12380 PF00857 Isochorismatase family FDV79_12385 PF00005 ABC transporter FDV79_12385 PF12704 MacB-like periplasmic core domain FDV79_12385 PF02687 FtsX-like permease family FDV79_12390 PF00005 ABC transporter FDV79_12390 PF02687 FtsX-like permease family FDV79_12390 PF12704 MacB-like periplasmic core domain FDV79_12395 PF00005 ABC transporter FDV79_12395 PF02687 FtsX-like permease family FDV79_12395 PF12704 MacB-like periplasmic core domain FDV79_12405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_12420 PF01938 TRAM domain FDV79_12420 PF05958 tRNA (Uracil-5-)-methyltransferase FDV79_12435 PF00085 Thioredoxin FDV79_12440 PF02683 Cytochrome C biogenesis protein transmembrane region FDV79_12440 PF11412 Disulphide bond corrector protein DsbC FDV79_12450 PF03466 LysR substrate binding domain FDV79_12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_12455 PF00072 Response regulator receiver domain FDV79_12455 PF00196 Bacterial regulatory proteins, luxR family FDV79_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_12460 PF00512 His Kinase A (phospho-acceptor) domain FDV79_12465 PF13247 4Fe-4S dicluster domain FDV79_12470 PF03916 Polysulphide reductase, NrfD FDV79_12475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_12475 PF01568 Molydopterin dinucleotide binding domain FDV79_12475 PF00384 Molybdopterin oxidoreductase FDV79_12480 PF00034 Cytochrome c FDV79_12485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDV79_12490 PF04403 Paraquat-inducible protein A FDV79_12495 PF02470 MlaD protein FDV79_12505 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FDV79_12515 PF00535 Glycosyl transferase family 2 FDV79_12520 PF01370 NAD dependent epimerase/dehydratase family FDV79_12530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_12535 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDV79_12540 PF18073 Rubredoxin metal binding domain FDV79_12545 PF06305 Lipopolysaccharide assembly protein A domain FDV79_12550 PF00216 Bacterial DNA-binding protein FDV79_12555 PF00575 S1 RNA binding domain FDV79_12560 PF02224 Cytidylate kinase FDV79_12565 PF08496 Peptidase family S49 N-terminal FDV79_12565 PF01343 Peptidase family S49 FDV79_12570 PF00106 short chain dehydrogenase FDV79_12585 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV79_12585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV79_12585 PF14579 Helix-hairpin-helix motif FDV79_12585 PF02811 PHP domain FDV79_12585 PF01336 OB-fold nucleic acid binding domain FDV79_12590 PF01584 CheW-like domain FDV79_12590 PF00072 Response regulator receiver domain FDV79_12595 PF00480 ROK family FDV79_12600 PF02887 Pyruvate kinase, alpha/beta domain FDV79_12600 PF00224 Pyruvate kinase, barrel domain FDV79_12605 PF01734 Patatin-like phospholipase FDV79_12620 PF00209 Sodium:neurotransmitter symporter family FDV79_12640 PF00367 phosphotransferase system, EIIB FDV79_12640 PF02378 Phosphotransferase system, EIIC FDV79_12645 PF01026 TatD related DNase FDV79_12650 PF09115 DNA polymerase III, delta subunit, C terminal FDV79_12655 PF02223 Thymidylate kinase FDV79_12660 PF02618 YceG-like family FDV79_12665 PF01063 Amino-transferase class IV FDV79_12670 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV79_12670 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV79_12675 PF00550 Phosphopantetheine attachment site FDV79_12685 PF00698 Acyl transferase domain FDV79_12690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDV79_12690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDV79_12695 PF02504 Fatty acid synthesis protein FDV79_12700 PF01783 Ribosomal L32p protein family FDV79_12705 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDV79_12710 PF02545 Maf-like protein FDV79_12715 PF01479 S4 domain FDV79_12715 PF00849 RNA pseudouridylate synthase FDV79_12730 PF12111 Polyribonucleotide phosphorylase C terminal FDV79_12730 PF00575 S1 RNA binding domain FDV79_12730 PF10150 Ribonuclease E/G family FDV79_12740 PF01740 STAS domain FDV79_12740 PF00916 Sulfate permease family FDV79_12745 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDV79_12750 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FDV79_12750 PF12557 Cob(I)alamin adenosyltransferase N terminal FDV79_12760 PF00485 Phosphoribulokinase / Uridine kinase family FDV79_12765 PF10609 NUBPL iron-transfer P-loop NTPase FDV79_12770 PF09334 tRNA synthetases class I (M) FDV79_12770 PF01588 Putative tRNA binding domain FDV79_12780 PF00392 Bacterial regulatory proteins, gntR family FDV79_12780 PF07840 FadR C-terminal domain FDV79_12785 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FDV79_12790 PF02600 Disulfide bond formation protein DsbB FDV79_12795 PF02810 SEC-C motif FDV79_12795 PF03695 Uncharacterised protein family (UPF0149) FDV79_12800 PF01207 Dihydrouridine synthase (Dus) FDV79_12805 PF05230 MASE2 domain FDV79_12805 PF00990 Diguanylate cyclase, GGDEF domain FDV79_12810 PF00128 Alpha amylase, catalytic domain FDV79_12810 PF02903 Alpha amylase, N-terminal ig-like domain FDV79_12815 PF00005 ABC transporter FDV79_12820 PF02653 Branched-chain amino acid transport system / permease component FDV79_12830 PF04217 Protein of unknown function, DUF412 FDV79_12835 PF00871 Acetokinase family FDV79_12840 PF07085 DRTGG domain FDV79_12840 PF01515 Phosphate acetyl/butaryl transferase FDV79_12845 PF13194 Domain of unknown function (DUF4010) FDV79_12855 PF13409 Glutathione S-transferase, N-terminal domain FDV79_12860 PF00005 ABC transporter FDV79_12860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_12865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_12865 PF00005 ABC transporter FDV79_12870 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_12870 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_12875 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_12880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_12885 PF02391 MoaE protein FDV79_12890 PF02597 ThiS family FDV79_12895 PF01967 MoaC family FDV79_12900 PF00994 Probable molybdopterin binding domain FDV79_12905 PF04055 Radical SAM superfamily FDV79_12905 PF06463 Molybdenum Cofactor Synthesis C FDV79_12910 PF01933 Uncharacterised protein family UPF0052 FDV79_12915 PF01627 Hpt domain FDV79_12920 PF00072 Response regulator receiver domain FDV79_12920 PF02954 Bacterial regulatory protein, Fis family FDV79_12920 PF00158 Sigma-54 interaction domain FDV79_12925 PF17757 UvrB interaction domain FDV79_12925 PF00271 Helicase conserved C-terminal domain FDV79_12925 PF12344 Ultra-violet resistance protein B FDV79_12925 PF02151 UvrB/uvrC motif FDV79_12925 PF04851 Type III restriction enzyme, res subunit FDV79_12940 PF02508 Rnf-Nqr subunit, membrane protein FDV79_12945 PF04060 Putative Fe-S cluster FDV79_12950 PF10531 SLBB domain FDV79_12950 PF13375 RnfC Barrel sandwich hybrid domain FDV79_12950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDV79_12950 PF12838 4Fe-4S dicluster domain FDV79_12955 PF03116 NQR2, RnfD, RnfE family FDV79_12960 PF04205 FMN-binding domain FDV79_12965 PF02508 Rnf-Nqr subunit, membrane protein FDV79_12970 PF00633 Helix-hairpin-helix motif FDV79_12970 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV79_12970 PF10576 Iron-sulfur binding domain of endonuclease III FDV79_12975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_12980 PF10952 Protein of unknown function (DUF2753) FDV79_12985 PF18393 MotY N-terminal domain FDV79_12985 PF00691 OmpA family FDV79_13000 PF00929 Exonuclease FDV79_13005 PF13726 Na+-H+ antiporter family FDV79_13005 PF03553 Na+/H+ antiporter family FDV79_13015 PF00462 Glutaredoxin FDV79_13020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDV79_13020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDV79_13035 PF00465 Iron-containing alcohol dehydrogenase FDV79_13035 PF00171 Aldehyde dehydrogenase family FDV79_13040 PF01914 MarC family integral membrane protein FDV79_13045 PF00027 Cyclic nucleotide-binding domain FDV79_13045 PF00520 Ion transport protein FDV79_13050 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV79_13050 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV79_13055 PF03553 Na+/H+ antiporter family FDV79_13070 PF04245 37-kD nucleoid-associated bacterial protein FDV79_13075 PF07208 Protein of unknown function (DUF1414) FDV79_13080 PF00884 Sulfatase FDV79_13080 PF11893 Domain of unknown function (DUF3413) FDV79_13090 PF00850 Histone deacetylase domain FDV79_13095 PF00106 short chain dehydrogenase FDV79_13110 PF01131 DNA topoisomerase FDV79_13110 PF01751 Toprim domain FDV79_13115 PF00881 Nitroreductase family FDV79_13120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV79_13120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_13125 PF01343 Peptidase family S49 FDV79_13130 PF00710 Asparaginase, N-terminal FDV79_13130 PF17763 Glutaminase/Asparaginase C-terminal domain FDV79_13135 PF07023 Protein of unknown function (DUF1315) FDV79_13145 PF01641 SelR domain FDV79_13150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV79_13150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV79_13155 PF01263 Aldose 1-epimerase FDV79_13160 PF02743 Cache domain FDV79_13160 PF00672 HAMP domain FDV79_13160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_13165 PF13847 Methyltransferase domain FDV79_13185 PF00245 Alkaline phosphatase FDV79_13195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_13200 PF03992 Antibiotic biosynthesis monooxygenase FDV79_13205 PF05552 Conserved TM helix FDV79_13205 PF00924 Mechanosensitive ion channel FDV79_13210 PF03692 Putative zinc- or iron-chelating domain FDV79_13215 PF04226 Transglycosylase associated protein FDV79_13220 PF03692 Putative zinc- or iron-chelating domain FDV79_13230 PF03313 Serine dehydratase alpha chain FDV79_13235 PF01042 Endoribonuclease L-PSP FDV79_13245 PF00230 Major intrinsic protein FDV79_13250 PF13662 Toprim domain FDV79_13250 PF02132 RecR protein FDV79_13255 PF02575 YbaB/EbfC DNA-binding family FDV79_13260 PF12169 DNA polymerase III subunits gamma and tau domain III FDV79_13260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FDV79_13260 PF12170 DNA polymerase III tau subunit V interacting with alpha FDV79_13265 PF00156 Phosphoribosyl transferase domain FDV79_13270 PF04304 Protein of unknown function (DUF454) FDV79_13280 PF00072 Response regulator receiver domain FDV79_13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_13285 PF03466 LysR substrate binding domain FDV79_13290 PF00156 Phosphoribosyl transferase domain FDV79_13295 PF02674 Colicin V production protein FDV79_13300 PF05036 Sporulation related domain FDV79_13305 PF08245 Mur ligase middle domain FDV79_13305 PF02875 Mur ligase family, glutamate ligase domain FDV79_13310 PF01039 Carboxyl transferase domain FDV79_13310 PF17848 Acetyl-coA carboxylase zinc finger domain FDV79_13315 PF01416 tRNA pseudouridine synthase FDV79_13325 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV79_13325 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV79_13330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV79_13330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV79_13330 PF11890 Domain of unknown function (DUF3410) FDV79_13340 PF00109 Beta-ketoacyl synthase, N-terminal domain FDV79_13340 PF02801 Beta-ketoacyl synthase, C-terminal domain FDV79_13345 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDV79_13345 PF01266 FAD dependent oxidoreductase FDV79_13350 PF03358 NADPH-dependent FMN reductase FDV79_13360 PF08891 YfcL protein FDV79_13365 PF04315 Elongation factor P hydroxylase FDV79_13375 PF03458 UPF0126 domain FDV79_13380 PF01264 Chorismate synthase FDV79_13385 PF05175 Methyltransferase small domain FDV79_13390 PF01713 Smr domain FDV79_13395 PF00300 Histidine phosphatase superfamily (branch 1) FDV79_13400 PF16187 Middle or third domain of peptidase_M16 FDV79_13400 PF05193 Peptidase M16 inactive domain FDV79_13400 PF00675 Insulinase (Peptidase family M16) FDV79_13410 PF00378 Enoyl-CoA hydratase/isomerase FDV79_13410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDV79_13410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDV79_13415 PF02803 Thiolase, C-terminal domain FDV79_13415 PF00108 Thiolase, N-terminal domain FDV79_13425 PF08281 Sigma-70, region 4 FDV79_13425 PF04542 Sigma-70 region 2 FDV79_13435 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV79_13440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV79_13445 PF04333 MlaA lipoprotein FDV79_13455 PF03918 Cytochrome C biogenesis protein FDV79_13460 PF08534 Redoxin FDV79_13465 PF01578 Cytochrome C assembly protein FDV79_13465 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDV79_13470 PF03100 CcmE FDV79_13475 PF04995 Heme exporter protein D (CcmD) FDV79_13480 PF01578 Cytochrome C assembly protein FDV79_13485 PF03379 CcmB protein FDV79_13490 PF00005 ABC transporter FDV79_13500 PF01584 CheW-like domain FDV79_13510 PF13614 AAA domain FDV79_13515 PF00072 Response regulator receiver domain FDV79_13515 PF01339 CheB methylesterase FDV79_13520 PF02895 Signal transducing histidine kinase, homodimeric domain FDV79_13520 PF00072 Response regulator receiver domain FDV79_13520 PF01627 Hpt domain FDV79_13520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_13520 PF01584 CheW-like domain FDV79_13525 PF04344 Chemotaxis phosphatase, CheZ FDV79_13530 PF00072 Response regulator receiver domain FDV79_13535 PF04545 Sigma-70, region 4 FDV79_13535 PF04539 Sigma-70 region 3 FDV79_13535 PF04542 Sigma-70 region 2 FDV79_13540 PF10609 NUBPL iron-transfer P-loop NTPase FDV79_13545 PF00448 SRP54-type protein, GTPase domain FDV79_13550 PF00771 FHIPEP family FDV79_13555 PF01312 FlhB HrpN YscU SpaS Family FDV79_13560 PF01311 Bacterial export proteins, family 1 FDV79_13565 PF01313 Bacterial export proteins, family 3 FDV79_13570 PF00813 FliP family FDV79_13575 PF04347 Flagellar biosynthesis protein, FliO FDV79_13580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV79_13585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV79_13585 PF02154 Flagellar motor switch protein FliM FDV79_13605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_13605 PF18269 T3SS EscN ATPase C-terminal domain FDV79_13615 PF01706 FliG C-terminal domain FDV79_13615 PF14842 FliG N-terminal domain FDV79_13615 PF14841 FliG middle domain FDV79_13620 PF01514 Secretory protein of YscJ/FliF family FDV79_13620 PF08345 Flagellar M-ring protein C-terminal FDV79_13625 PF02049 Flagellar hook-basal body complex protein FliE FDV79_13630 PF00158 Sigma-54 interaction domain FDV79_13630 PF00072 Response regulator receiver domain FDV79_13630 PF02954 Bacterial regulatory protein, Fis family FDV79_13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_13635 PF00512 His Kinase A (phospho-acceptor) domain FDV79_13640 PF02954 Bacterial regulatory protein, Fis family FDV79_13640 PF06490 Flagellar regulatory protein FleQ FDV79_13640 PF00158 Sigma-54 interaction domain FDV79_13645 PF02561 Flagellar protein FliS FDV79_13655 PF02465 Flagellar hook-associated protein 2 N-terminus FDV79_13655 PF07195 Flagellar hook-associated protein 2 C-terminus FDV79_13655 PF07196 Flagellin hook IN motif FDV79_13660 PF03646 FlaG protein FDV79_13665 PF00700 Bacterial flagellin C-terminal helical region FDV79_13665 PF00669 Bacterial flagellin N-terminal helical region FDV79_13665 PF07196 Flagellin hook IN motif FDV79_13670 PF07196 Flagellin hook IN motif FDV79_13670 PF00669 Bacterial flagellin N-terminal helical region FDV79_13670 PF00700 Bacterial flagellin C-terminal helical region FDV79_13680 PF07196 Flagellin hook IN motif FDV79_13680 PF00669 Bacterial flagellin N-terminal helical region FDV79_13680 PF00700 Bacterial flagellin C-terminal helical region FDV79_13685 PF04261 Dyp-type peroxidase family FDV79_13690 PF11143 Protein of unknown function (DUF2919) FDV79_13715 PF03960 ArsC family FDV79_13720 PF01546 Peptidase family M20/M25/M40 FDV79_13720 PF07687 Peptidase dimerisation domain FDV79_13740 PF00701 Dihydrodipicolinate synthetase family FDV79_13745 PF01842 ACT domain FDV79_13750 PF00578 AhpC/TSA family FDV79_13755 PF01594 AI-2E family transporter FDV79_13765 PF13181 Tetratricopeptide repeat FDV79_13765 PF01435 Peptidase family M48 FDV79_13770 PF03960 ArsC family FDV79_13775 PF03358 NADPH-dependent FMN reductase FDV79_13790 PF00860 Permease family FDV79_13800 PF00586 AIR synthase related protein, N-terminal domain FDV79_13800 PF02769 AIR synthase related protein, C-terminal domain FDV79_13805 PF00551 Formyl transferase FDV79_13810 PF13230 Glutamine amidotransferases class-II FDV79_13815 PF13580 SIS domain FDV79_13820 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_13820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_13820 PF09317 Domain of unknown function (DUF1974) FDV79_13820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_13825 PF01740 STAS domain FDV79_13825 PF00916 Sulfate permease family FDV79_13830 PF00583 Acetyltransferase (GNAT) family FDV79_13850 PF00929 Exonuclease FDV79_13855 PF00075 RNase H FDV79_13860 PF08241 Methyltransferase domain FDV79_13865 PF00753 Metallo-beta-lactamase superfamily FDV79_13865 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDV79_13870 PF01464 Transglycosylase SLT domain FDV79_13870 PF01476 LysM domain FDV79_13880 PF03372 Endonuclease/Exonuclease/phosphatase family FDV79_13885 PF00543 Nitrogen regulatory protein P-II FDV79_13890 PF00034 Cytochrome c FDV79_13895 PF09179 TilS substrate binding domain FDV79_13895 PF01171 PP-loop family FDV79_13895 PF11734 TilS substrate C-terminal domain FDV79_13900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDV79_13905 PF01336 OB-fold nucleic acid binding domain FDV79_13905 PF02811 PHP domain FDV79_13905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV79_13905 PF14579 Helix-hairpin-helix motif FDV79_13905 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV79_13915 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDV79_13915 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_13920 PF07977 FabA-like domain FDV79_13925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDV79_13925 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_13930 PF03938 Outer membrane protein (OmpH-like) FDV79_13935 PF07244 Surface antigen variable number repeat FDV79_13935 PF01103 Surface antigen FDV79_13940 PF02163 Peptidase family M50 FDV79_13940 PF17820 PDZ domain FDV79_13945 PF13288 DXP reductoisomerase C-terminal domain FDV79_13945 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDV79_13945 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDV79_13955 PF01255 Putative undecaprenyl diphosphate synthase FDV79_13960 PF01765 Ribosome recycling factor FDV79_13965 PF00696 Amino acid kinase family FDV79_13970 PF00889 Elongation factor TS FDV79_13975 PF00318 Ribosomal protein S2 FDV79_13980 PF00557 Metallopeptidase family M24 FDV79_13985 PF01842 ACT domain FDV79_13985 PF08335 GlnD PII-uridylyltransferase FDV79_13985 PF01966 HD domain FDV79_13985 PF01909 Nucleotidyltransferase domain FDV79_13990 PF11944 Protein of unknown function (DUF3461) FDV79_13995 PF00849 RNA pseudouridylate synthase FDV79_14000 PF04287 tRNA pseudouridine synthase C FDV79_14025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDV79_14030 PF03806 AbgT putative transporter family FDV79_14040 PF00444 Ribosomal protein L36 FDV79_14045 PF01197 Ribosomal protein L31 FDV79_14050 PF18389 TrmO C-terminal domain FDV79_14050 PF01980 tRNA-methyltransferase O FDV79_14055 PF04073 Aminoacyl-tRNA editing domain FDV79_14055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDV79_14055 PF03129 Anticodon binding domain FDV79_14065 PF06786 Uncharacterised protein family (UPF0253) FDV79_14075 PF00209 Sodium:neurotransmitter symporter family FDV79_14090 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV79_14090 PF03449 Transcription elongation factor, N-terminal FDV79_14095 PF00270 DEAD/DEAH box helicase FDV79_14095 PF09382 RQC domain FDV79_14095 PF16124 RecQ zinc-binding FDV79_14095 PF00570 HRDC domain FDV79_14095 PF00271 Helicase conserved C-terminal domain FDV79_14100 PF11798 IMS family HHH motif FDV79_14100 PF00817 impB/mucB/samB family FDV79_14100 PF11799 impB/mucB/samB family C-terminal domain FDV79_14115 PF02424 ApbE family FDV79_14120 PF00970 Oxidoreductase FAD-binding domain FDV79_14120 PF00175 Oxidoreductase NAD-binding domain FDV79_14120 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_14125 PF02508 Rnf-Nqr subunit, membrane protein FDV79_14130 PF02508 Rnf-Nqr subunit, membrane protein FDV79_14135 PF04205 FMN-binding domain FDV79_14140 PF03116 NQR2, RnfD, RnfE family FDV79_14145 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FDV79_14145 PF11973 NQRA C-terminal domain FDV79_14150 PF01722 BolA-like protein FDV79_14155 PF05175 Methyltransferase small domain FDV79_14160 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDV79_14160 PF03923 Uncharacterized lipoprotein FDV79_14165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV79_14170 PF07690 Major Facilitator Superfamily FDV79_14180 PF04542 Sigma-70 region 2 FDV79_14180 PF04545 Sigma-70, region 4 FDV79_14205 PF03502 Nucleoside-specific channel-forming protein, Tsx FDV79_14210 PF02558 Ketopantoate reductase PanE/ApbA FDV79_14210 PF08546 Ketopantoate reductase PanE/ApbA C terminal FDV79_14215 PF01965 DJ-1/PfpI family FDV79_14220 PF00266 Aminotransferase class-V FDV79_14225 PF17158 Membrane-associated sensor, integral membrane domain FDV79_14225 PF00990 Diguanylate cyclase, GGDEF domain FDV79_14230 PF02657 Fe-S metabolism associated domain FDV79_14235 PF00899 ThiF family FDV79_14240 PF06725 3D domain FDV79_14240 PF03562 MltA specific insert domain FDV79_14255 PF00583 Acetyltransferase (GNAT) family FDV79_14255 PF00696 Amino acid kinase family FDV79_14265 PF13538 UvrD-like helicase C-terminal domain FDV79_14270 PF13361 UvrD-like helicase C-terminal domain FDV79_14270 PF00580 UvrD/REP helicase N-terminal domain FDV79_14270 PF12705 PD-(D/E)XK nuclease superfamily FDV79_14280 PF17946 RecC C-terminal domain FDV79_14285 PF11893 Domain of unknown function (DUF3413) FDV79_14285 PF00884 Sulfatase FDV79_14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_14295 PF03466 LysR substrate binding domain FDV79_14300 PF07130 YebG protein FDV79_14305 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FDV79_14305 PF14602 Hexapeptide repeat of succinyl-transferase FDV79_14310 PF03009 Glycerophosphoryl diester phosphodiesterase family FDV79_14315 PF07690 Major Facilitator Superfamily FDV79_14330 PF00230 Major intrinsic protein FDV79_14335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDV79_14335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDV79_14340 PF08220 DeoR-like helix-turn-helix domain FDV79_14340 PF00455 DeoR C terminal sensor domain FDV79_14345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDV79_14345 PF01266 FAD dependent oxidoreductase FDV79_14350 PF01544 CorA-like Mg2+ transporter protein FDV79_14365 PF01588 Putative tRNA binding domain FDV79_14370 PF00356 Bacterial regulatory proteins, lacI family FDV79_14375 PF14579 Helix-hairpin-helix motif FDV79_14375 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV79_14375 PF02811 PHP domain FDV79_14375 PF00929 Exonuclease FDV79_14375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV79_14385 PF00474 Sodium:solute symporter family FDV79_14390 PF01263 Aldose 1-epimerase FDV79_14395 PF08544 GHMP kinases C terminal FDV79_14395 PF10509 Galactokinase galactose-binding signature FDV79_14395 PF00288 GHMP kinases N terminal domain FDV79_14400 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FDV79_14400 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FDV79_14405 PF16363 GDP-mannose 4,6 dehydratase FDV79_14415 PF00356 Bacterial regulatory proteins, lacI family FDV79_14420 PF16353 Domain of unknown function(DUF4981) FDV79_14420 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDV79_14420 PF02929 Beta galactosidase small chain FDV79_14420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDV79_14420 PF00703 Glycosyl hydrolases family 2 FDV79_14425 PF04074 YhcH/YjgK/YiaL FDV79_14430 PF13520 Amino acid permease FDV79_14435 PF03466 LysR substrate binding domain FDV79_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_14465 PF00437 Type II/IV secretion system protein FDV79_14495 PF00263 Bacterial type II and III secretion system protein FDV79_14495 PF13629 Pilus formation protein N terminal region FDV79_14495 PF04972 BON domain FDV79_14520 PF02805 Metal binding domain of Ada FDV79_14520 PF12833 Helix-turn-helix domain FDV79_14525 PF00501 AMP-binding enzyme FDV79_14535 PF03466 LysR substrate binding domain FDV79_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_14540 PF00009 Elongation factor Tu GTP binding domain FDV79_14540 PF00679 Elongation factor G C-terminus FDV79_14540 PF14492 Elongation Factor G, domain II FDV79_14540 PF03144 Elongation factor Tu domain 2 FDV79_14540 PF03764 Elongation factor G, domain IV FDV79_14545 PF18073 Rubredoxin metal binding domain FDV79_14555 PF18429 Domain of unknown function (DUF5609) FDV79_14565 PF01048 Phosphorylase superfamily FDV79_14570 PF01676 Metalloenzyme superfamily FDV79_14575 PF02885 Glycosyl transferase family, helical bundle domain FDV79_14575 PF00591 Glycosyl transferase family, a/b domain FDV79_14575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FDV79_14580 PF01791 DeoC/LacD family aldolase FDV79_14585 PF07662 Na+ dependent nucleoside transporter C-terminus FDV79_14585 PF01773 Na+ dependent nucleoside transporter N-terminus FDV79_14585 PF07670 Nucleoside recognition FDV79_14590 PF01026 TatD related DNase FDV79_14600 PF16658 Class II release factor RF3, C-terminal domain FDV79_14600 PF00009 Elongation factor Tu GTP binding domain FDV79_14600 PF03144 Elongation factor Tu domain 2 FDV79_14620 PF13508 Acetyltransferase (GNAT) domain FDV79_14625 PF02036 SCP-2 sterol transfer family FDV79_14630 PF00563 EAL domain FDV79_14630 PF00990 Diguanylate cyclase, GGDEF domain FDV79_14630 PF03707 Bacterial signalling protein N terminal repeat FDV79_14635 PF01136 Peptidase family U32 FDV79_14640 PF01136 Peptidase family U32 FDV79_14645 PF01554 MatE FDV79_14655 PF13181 Tetratricopeptide repeat FDV79_14655 PF07719 Tetratricopeptide repeat FDV79_14660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDV79_14660 PF00013 KH domain FDV79_14660 PF03725 3' exoribonuclease family, domain 2 FDV79_14660 PF00575 S1 RNA binding domain FDV79_14660 PF01138 3' exoribonuclease family, domain 1 FDV79_14665 PF00312 Ribosomal protein S15 FDV79_14670 PF09157 Pseudouridine synthase II TruB, C-terminal FDV79_14670 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDV79_14670 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDV79_14675 PF02033 Ribosome-binding factor A FDV79_14680 PF04760 Translation initiation factor IF-2, N-terminal region FDV79_14680 PF08364 Bacterial translation initiation factor IF-2 associated region FDV79_14680 PF11987 Translation-initiation factor 2 FDV79_14680 PF00009 Elongation factor Tu GTP binding domain FDV79_14685 PF13184 NusA-like KH domain FDV79_14685 PF00575 S1 RNA binding domain FDV79_14685 PF08529 NusA N-terminal domain FDV79_14690 PF17384 RimP C-terminal SH3 domain FDV79_14690 PF02576 RimP N-terminal domain FDV79_14705 PF03840 Preprotein translocase SecG subunit FDV79_14715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV79_14715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV79_14715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV79_14715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV79_14720 PF00809 Pterin binding enzyme FDV79_14725 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_14725 PF17862 AAA+ lid domain FDV79_14725 PF06480 FtsH Extracellular FDV79_14725 PF01434 Peptidase family M41 FDV79_14730 PF01728 FtsJ-like methyltransferase FDV79_14735 PF01985 CRS1 / YhbY (CRM) domain FDV79_14740 PF03449 Transcription elongation factor, N-terminal FDV79_14740 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV79_14745 PF13609 Gram-negative porin FDV79_14750 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FDV79_14760 PF00579 tRNA synthetases class I (W and Y) FDV79_14765 PF01476 LysM domain FDV79_14765 PF01551 Peptidase family M23 FDV79_14765 PF08525 Opacity-associated protein A N-terminal motif FDV79_14770 PF00873 AcrB/AcrD/AcrF family FDV79_14780 PF01521 Iron-sulphur cluster biosynthesis FDV79_14785 PF00202 Aminotransferase class-III FDV79_14790 PF01594 AI-2E family transporter FDV79_14795 PF05175 Methyltransferase small domain FDV79_14795 PF08468 Methyltransferase small domain N-terminal FDV79_14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_14805 PF00072 Response regulator receiver domain FDV79_14805 PF00512 His Kinase A (phospho-acceptor) domain FDV79_14810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_14815 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_14820 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_14820 PF12911 N-terminal TM domain of oligopeptide transport permease C FDV79_14825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_14825 PF00005 ABC transporter FDV79_14830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_14830 PF00005 ABC transporter FDV79_14840 PF01869 BadF/BadG/BcrA/BcrD ATPase family FDV79_14845 PF00728 Glycosyl hydrolase family 20, catalytic domain FDV79_14845 PF02838 Glycosyl hydrolase family 20, domain 2 FDV79_14850 PF06165 Glycosyltransferase family 36 FDV79_14850 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FDV79_14855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV79_14855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV79_14855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV79_14855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV79_14860 PF08402 TOBE domain FDV79_14860 PF00005 ABC transporter FDV79_14870 PF13416 Bacterial extracellular solute-binding protein FDV79_14875 PF00909 Ammonium Transporter Family FDV79_14880 PF00543 Nitrogen regulatory protein P-II FDV79_14885 PF06062 Uncharacterised protein family (UPF0231) FDV79_14890 PF00330 Aconitase family (aconitate hydratase) FDV79_14890 PF06434 Aconitate hydratase 2 N-terminus FDV79_14890 PF11791 Aconitate B N-terminal domain FDV79_14895 PF01734 Patatin-like phospholipase FDV79_14900 PF00912 Transglycosylase FDV79_14900 PF00905 Penicillin binding protein transpeptidase domain FDV79_14900 PF14814 Bifunctional transglycosylase second domain FDV79_14905 PF04408 Helicase associated domain (HA2) FDV79_14905 PF08482 ATP-dependent helicase C-terminal FDV79_14905 PF00270 DEAD/DEAH box helicase FDV79_14905 PF00271 Helicase conserved C-terminal domain FDV79_14910 PF17746 SfsA N-terminal OB domain FDV79_14910 PF03749 Sugar fermentation stimulation protein RE domain FDV79_14915 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDV79_14925 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDV79_14935 PF12627 Probable RNA and SrmB- binding site of polymerase A FDV79_14935 PF12626 Polymerase A arginine-rich C-terminus FDV79_14935 PF01743 Poly A polymerase head domain FDV79_14940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDV79_14945 PF02548 Ketopantoate hydroxymethyltransferase FDV79_14950 PF02569 Pantoate-beta-alanine ligase FDV79_14960 PF03279 Bacterial lipid A biosynthesis acyltransferase FDV79_14970 PF01061 ABC-2 type transporter FDV79_14975 PF00005 ABC transporter FDV79_14985 PF00916 Sulfate permease family FDV79_14985 PF01740 STAS domain FDV79_14990 PF00484 Carbonic anhydrase FDV79_14995 PF00156 Phosphoribosyl transferase domain FDV79_15000 PF00440 Bacterial regulatory proteins, tetR family FDV79_15005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV79_15005 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_15010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV79_15010 PF02817 e3 binding domain FDV79_15010 PF00364 Biotin-requiring enzyme FDV79_15015 PF00456 Transketolase, thiamine diphosphate binding domain FDV79_15015 PF17831 Pyruvate dehydrogenase E1 component middle domain FDV79_15020 PF00392 Bacterial regulatory proteins, gntR family FDV79_15020 PF07729 FCD domain FDV79_15025 PF01510 N-acetylmuramoyl-L-alanine amidase FDV79_15030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDV79_15030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDV79_15035 PF07963 Prokaryotic N-terminal methylation motif FDV79_15035 PF00114 Pilin (bacterial filament) FDV79_15040 PF00437 Type II/IV secretion system protein FDV79_15040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDV79_15045 PF00482 Type II secretion system (T2SS), protein F FDV79_15050 PF01478 Type IV leader peptidase family FDV79_15050 PF06750 Bacterial Peptidase A24 N-terminal domain FDV79_15055 PF01121 Dephospho-CoA kinase FDV79_15060 PF07072 Cell division protein FDV79_15065 PF03884 DNA gyrase inhibitor YacG FDV79_15070 PF01245 Ribosomal protein L19 FDV79_15075 PF01746 tRNA (Guanine-1)-methyltransferase FDV79_15080 PF05239 PRC-barrel domain FDV79_15080 PF01782 RimM N-terminal domain FDV79_15085 PF00886 Ribosomal protein S16 FDV79_15090 PF02881 SRP54-type protein, helical bundle domain FDV79_15090 PF00448 SRP54-type protein, GTPase domain FDV79_15090 PF02978 Signal peptide binding domain FDV79_15095 PF01578 Cytochrome C assembly protein FDV79_15100 PF03471 Transporter associated domain FDV79_15100 PF01595 Cyclin M transmembrane N-terminal domain FDV79_15100 PF00571 CBS domain FDV79_15105 PF02664 S-Ribosylhomocysteinase (LuxS) FDV79_15115 PF04262 Glutamate-cysteine ligase FDV79_15120 PF05193 Peptidase M16 inactive domain FDV79_15120 PF00675 Insulinase (Peptidase family M16) FDV79_15125 PF09335 SNARE associated Golgi protein FDV79_15130 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_15130 PF00107 Zinc-binding dehydrogenase FDV79_15135 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FDV79_15140 PF00364 Biotin-requiring enzyme FDV79_15140 PF00682 HMGL-like FDV79_15140 PF02436 Conserved carboxylase domain FDV79_15145 PF04277 Oxaloacetate decarboxylase, gamma chain FDV79_15200 PF02599 Global regulator protein family FDV79_15205 PF13840 ACT domain FDV79_15205 PF00696 Amino acid kinase family FDV79_15205 PF01842 ACT domain FDV79_15210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDV79_15210 PF02272 DHHA1 domain FDV79_15210 PF01411 tRNA synthetases class II (A) FDV79_15215 PF02631 RecX family FDV79_15220 PF00154 recA bacterial DNA recombination protein FDV79_15225 PF02464 Competence-damaged protein FDV79_15230 PF05192 MutS domain III FDV79_15230 PF01624 MutS domain I FDV79_15230 PF05188 MutS domain II FDV79_15230 PF00488 MutS domain V FDV79_15230 PF05190 MutS family domain IV FDV79_15240 PF01551 Peptidase family M23 FDV79_15240 PF01476 LysM domain FDV79_15250 PF01975 Survival protein SurE FDV79_15255 PF01142 tRNA pseudouridine synthase D (TruD) FDV79_15260 PF02542 YgbB family FDV79_15265 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDV79_15270 PF04977 Septum formation initiator FDV79_15275 PF00113 Enolase, C-terminal TIM barrel domain FDV79_15275 PF03952 Enolase, N-terminal domain FDV79_15280 PF00117 Glutamine amidotransferase class-I FDV79_15280 PF06418 CTP synthase N-terminus FDV79_15285 PF03819 MazG nucleotide pyrophosphohydrolase domain FDV79_15290 PF02824 TGS domain FDV79_15290 PF13291 ACT domain FDV79_15290 PF04607 Region found in RelA / SpoT proteins FDV79_15300 PF01938 TRAM domain FDV79_15300 PF05958 tRNA (Uracil-5-)-methyltransferase FDV79_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_15310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV79_15310 PF00072 Response regulator receiver domain FDV79_15310 PF01627 Hpt domain FDV79_15310 PF00672 HAMP domain FDV79_15310 PF00512 His Kinase A (phospho-acceptor) domain FDV79_15315 PF01648 4'-phosphopantetheinyl transferase superfamily FDV79_15320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDV79_15325 PF02565 Recombination protein O C terminal FDV79_15325 PF11967 Recombination protein O N terminal FDV79_15330 PF01926 50S ribosome-binding GTPase FDV79_15330 PF07650 KH domain FDV79_15335 PF00035 Double-stranded RNA binding motif FDV79_15335 PF14622 Ribonuclease-III-like FDV79_15340 PF10502 Signal peptidase, peptidase S26 FDV79_15345 PF00009 Elongation factor Tu GTP binding domain FDV79_15345 PF06421 GTP-binding protein LepA C-terminus FDV79_15345 PF00679 Elongation factor G C-terminus FDV79_15345 PF03144 Elongation factor Tu domain 2 FDV79_15355 PF03888 MucB/RseB N-terminal domain FDV79_15355 PF17188 MucB/RseB C-terminal domain FDV79_15360 PF03873 Anti sigma-E protein RseA, C-terminal domain FDV79_15360 PF03872 Anti sigma-E protein RseA, N-terminal domain FDV79_15365 PF04542 Sigma-70 region 2 FDV79_15365 PF08281 Sigma-70, region 4 FDV79_15375 PF00890 FAD binding domain FDV79_15375 PF02910 Fumarate reductase flavoprotein C-term FDV79_15385 PF03937 Flavinator of succinate dehydrogenase FDV79_15390 PF01571 Aminomethyltransferase folate-binding domain FDV79_15405 PF01494 FAD binding domain FDV79_15410 PF01494 FAD binding domain FDV79_15415 PF03695 Uncharacterised protein family (UPF0149) FDV79_15425 PF05164 Cell division protein ZapA FDV79_15435 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDV79_15440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDV79_15445 PF01842 ACT domain FDV79_15445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV79_15445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV79_15450 PF04402 Protein of unknown function (DUF541) FDV79_15455 PF03466 LysR substrate binding domain FDV79_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_15460 PF01810 LysE type translocator FDV79_15465 PF04073 Aminoacyl-tRNA editing domain FDV79_15470 PF05552 Conserved TM helix FDV79_15470 PF00924 Mechanosensitive ion channel FDV79_15475 PF01116 Fructose-bisphosphate aldolase class-II FDV79_15480 PF00162 Phosphoglycerate kinase FDV79_15485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV79_15485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV79_15490 PF07715 TonB-dependent Receptor Plug Domain FDV79_15490 PF00593 TonB dependent receptor FDV79_15495 PF03466 LysR substrate binding domain FDV79_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_15500 PF00456 Transketolase, thiamine diphosphate binding domain FDV79_15500 PF02780 Transketolase, C-terminal domain FDV79_15500 PF02779 Transketolase, pyrimidine binding domain FDV79_15510 PF02772 S-adenosylmethionine synthetase, central domain FDV79_15510 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDV79_15510 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDV79_15520 PF17283 SprT-like zinc ribbon domain FDV79_15520 PF10263 SprT-like family FDV79_15525 PF04231 Endonuclease I FDV79_15530 PF04452 RNA methyltransferase FDV79_15535 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDV79_15535 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDV79_15540 PF02622 Uncharacterized ACR, COG1678 FDV79_15545 PF03652 Holliday junction resolvase FDV79_15550 PF00437 Type II/IV secretion system protein FDV79_15555 PF00437 Type II/IV secretion system protein FDV79_15560 PF01168 Alanine racemase, N-terminal domain FDV79_15565 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDV79_15565 PF03807 NADP oxidoreductase coenzyme F420-dependent FDV79_15570 PF02325 YGGT family FDV79_15575 PF02594 Uncharacterised ACR, YggU family COG1872 FDV79_15585 PF01725 Ham1 family FDV79_15590 PF06969 HemN C-terminal domain FDV79_15590 PF04055 Radical SAM superfamily FDV79_15595 PF04960 Glutaminase FDV79_15600 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDV79_15605 PF02390 Putative methyltransferase FDV79_15610 PF00633 Helix-hairpin-helix motif FDV79_15610 PF14815 NUDIX domain FDV79_15610 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV79_15615 PF04362 Bacterial Fe(2+) trafficking FDV79_15620 PF01464 Transglycosylase SLT domain FDV79_15620 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FDV79_15660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_15660 PF00672 HAMP domain FDV79_15660 PF17200 Single Cache domain 2 FDV79_15690 PF00171 Aldehyde dehydrogenase family FDV79_15740 PF00072 Response regulator receiver domain FDV79_15745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV79_15745 PF00356 Bacterial regulatory proteins, lacI family FDV79_15750 PF04794 YdjC-like protein FDV79_15755 PF02056 Family 4 glycosyl hydrolase FDV79_15755 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDV79_15760 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FDV79_15765 PF02378 Phosphotransferase system, EIIC FDV79_15770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_15775 PF01522 Polysaccharide deacetylase FDV79_15785 PF00106 short chain dehydrogenase FDV79_15790 PF10011 Predicted membrane protein (DUF2254) FDV79_15800 PF03739 Lipopolysaccharide export system permease LptF/LptG FDV79_15805 PF03739 Lipopolysaccharide export system permease LptF/LptG FDV79_15810 PF00883 Cytosol aminopeptidase family, catalytic domain FDV79_15810 PF02789 Cytosol aminopeptidase family, N-terminal domain FDV79_15815 PF04364 DNA polymerase III chi subunit, HolC FDV79_15820 PF00133 tRNA synthetases class I (I, L, M and V) FDV79_15820 PF10458 Valyl tRNA synthetase tRNA binding arm FDV79_15820 PF08264 Anticodon-binding domain of tRNA FDV79_15830 PF00583 Acetyltransferase (GNAT) family FDV79_15840 PF06877 Regulator of ribonuclease activity B FDV79_15855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDV79_15855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDV79_15865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDV79_15865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDV79_15870 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FDV79_15870 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FDV79_15875 PF01042 Endoribonuclease L-PSP FDV79_15880 PF01553 Acyltransferase FDV79_15885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDV79_15890 PF01722 BolA-like protein FDV79_15900 PF05494 MlaC protein FDV79_15905 PF02470 MlaD protein FDV79_15910 PF02405 Permease MlaE FDV79_15915 PF00005 ABC transporter FDV79_15920 PF01699 Sodium/calcium exchanger protein FDV79_15925 PF01380 SIS domain FDV79_15925 PF00571 CBS domain FDV79_15935 PF03968 OstA-like protein FDV79_15940 PF00005 ABC transporter FDV79_15940 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDV79_15945 PF04963 Sigma-54 factor, core binding domain FDV79_15945 PF04552 Sigma-54, DNA binding domain FDV79_15945 PF00309 Sigma-54 factor, Activator interacting domain (AID) FDV79_15950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDV79_15955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_15960 PF03668 P-loop ATPase protein family FDV79_15965 PF00381 PTS HPr component phosphorylation site FDV79_15970 PF03448 MgtE intracellular N domain FDV79_15970 PF00571 CBS domain FDV79_15970 PF01769 Divalent cation transporter FDV79_15975 PF01523 Putative modulator of DNA gyrase FDV79_15980 PF04751 Protein of unknown function (DUF615) FDV79_15985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV79_15985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV79_15990 PF00849 RNA pseudouridylate synthase FDV79_16005 PF18337 RapA N-terminal Tudor like domain FDV79_16005 PF00271 Helicase conserved C-terminal domain FDV79_16005 PF18339 RapA N-terminal Tudor like domain 1 FDV79_16005 PF00176 SNF2 family N-terminal domain FDV79_16005 PF12137 RNA polymerase recycling family C-terminal FDV79_16010 PF13638 PIN domain FDV79_16010 PF02562 PhoH-like protein FDV79_16015 PF01523 Putative modulator of DNA gyrase FDV79_16020 PF00795 Carbon-nitrogen hydrolase FDV79_16025 PF13116 Protein of unknown function FDV79_16025 PF13502 AsmA-like C-terminal region FDV79_16030 PF00575 S1 RNA binding domain FDV79_16030 PF10150 Ribonuclease E/G family FDV79_16035 PF02545 Maf-like protein FDV79_16040 PF04093 rod shape-determining protein MreD FDV79_16045 PF04085 rod shape-determining protein MreC FDV79_16085 PF00114 Pilin (bacterial filament) FDV79_16085 PF07963 Prokaryotic N-terminal methylation motif FDV79_16095 PF00482 Type II secretion system (T2SS), protein F FDV79_16100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDV79_16100 PF00437 Type II/IV secretion system protein FDV79_16110 PF01471 Putative peptidoglycan binding domain FDV79_16110 PF13401 AAA domain FDV79_16115 PF03958 Bacterial type II/III secretion system short domain FDV79_16115 PF00263 Bacterial type II and III secretion system protein FDV79_16115 PF11741 AMIN domain FDV79_16115 PF07660 Secretin and TonB N terminus short domain FDV79_16135 PF00563 EAL domain FDV79_16135 PF00990 Diguanylate cyclase, GGDEF domain FDV79_16135 PF17157 Gammaproteobacterial periplasmic sensor domain FDV79_16140 PF00436 Single-strand binding protein family FDV79_16145 PF00196 Bacterial regulatory proteins, luxR family FDV79_16150 PF00483 Nucleotidyl transferase FDV79_16155 PF00005 ABC transporter FDV79_16155 PF17760 UvrA interaction domain FDV79_16155 PF17755 UvrA DNA-binding domain FDV79_16165 PF00266 Aminotransferase class-V FDV79_16175 PF00696 Amino acid kinase family FDV79_16175 PF01842 ACT domain FDV79_16180 PF02574 Homocysteine S-methyltransferase FDV79_16180 PF00809 Pterin binding enzyme FDV79_16180 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDV79_16180 PF02607 B12 binding domain FDV79_16180 PF02310 B12 binding domain FDV79_16185 PF00999 Sodium/hydrogen exchanger family FDV79_16260 PF01507 Phosphoadenosine phosphosulfate reductase family FDV79_16265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV79_16265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV79_16270 PF00667 FAD binding domain FDV79_16270 PF00175 Oxidoreductase NAD-binding domain FDV79_16270 PF00258 Flavodoxin FDV79_16295 PF01207 Dihydrouridine synthase (Dus) FDV79_16305 PF01475 Ferric uptake regulator family FDV79_16315 PF00342 Phosphoglucose isomerase FDV79_16320 PF01894 Uncharacterised protein family UPF0047 FDV79_16330 PF00842 Alanine racemase, C-terminal domain FDV79_16330 PF01168 Alanine racemase, N-terminal domain FDV79_16335 PF03796 DnaB-like helicase C terminal domain FDV79_16335 PF00772 DnaB-like helicase N terminal domain FDV79_16345 PF01281 Ribosomal protein L9, N-terminal domain FDV79_16345 PF03948 Ribosomal protein L9, C-terminal domain FDV79_16350 PF01084 Ribosomal protein S18 FDV79_16355 PF00436 Single-strand binding protein family FDV79_16360 PF01250 Ribosomal protein S6 FDV79_16365 PF00834 Ribulose-phosphate 3 epimerase family FDV79_16370 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDV79_16380 PF01761 3-dehydroquinate synthase FDV79_16385 PF01202 Shikimate kinase FDV79_16390 PF00263 Bacterial type II and III secretion system protein FDV79_16390 PF03958 Bacterial type II/III secretion system short domain FDV79_16390 PF07660 Secretin and TonB N terminus short domain FDV79_16390 PF11741 AMIN domain FDV79_16415 PF17092 Penicillin-binding protein OB-like domain FDV79_16415 PF00905 Penicillin binding protein transpeptidase domain FDV79_16415 PF00912 Transglycosylase FDV79_16420 PF03466 LysR substrate binding domain FDV79_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_16425 PF08534 Redoxin FDV79_16425 PF00462 Glutaredoxin FDV79_16440 PF14698 Argininosuccinate lyase C-terminal FDV79_16440 PF00583 Acetyltransferase (GNAT) family FDV79_16440 PF00206 Lyase FDV79_16445 PF00764 Arginosuccinate synthase FDV79_16450 PF00696 Amino acid kinase family FDV79_16455 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDV79_16455 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDV79_16460 PF07687 Peptidase dimerisation domain FDV79_16460 PF01546 Peptidase family M20/M25/M40 FDV79_16465 PF00311 Phosphoenolpyruvate carboxylase FDV79_16475 PF02219 Methylenetetrahydrofolate reductase FDV79_16480 PF03447 Homoserine dehydrogenase, NAD binding domain FDV79_16480 PF00696 Amino acid kinase family FDV79_16480 PF00742 Homoserine dehydrogenase FDV79_16485 PF01053 Cys/Met metabolism PLP-dependent enzyme FDV79_16490 PF01340 Met Apo-repressor, MetJ FDV79_16495 PF03949 Malic enzyme, NAD binding domain FDV79_16495 PF00390 Malic enzyme, N-terminal domain FDV79_16500 PF00210 Ferritin-like domain FDV79_16505 PF04324 BFD-like [2Fe-2S] binding domain FDV79_16510 PF03144 Elongation factor Tu domain 2 FDV79_16510 PF00009 Elongation factor Tu GTP binding domain FDV79_16510 PF03143 Elongation factor Tu C-terminal domain FDV79_16515 PF03764 Elongation factor G, domain IV FDV79_16515 PF00679 Elongation factor G C-terminus FDV79_16515 PF00009 Elongation factor Tu GTP binding domain FDV79_16515 PF14492 Elongation Factor G, domain II FDV79_16515 PF03144 Elongation factor Tu domain 2 FDV79_16520 PF00177 Ribosomal protein S7p/S5e FDV79_16525 PF00164 Ribosomal protein S12/S23 FDV79_16530 PF04077 DsrH like protein FDV79_16535 PF02635 DsrE/DsrF-like family FDV79_16540 PF02635 DsrE/DsrF-like family FDV79_16545 PF13309 HTH domain FDV79_16545 PF08348 YheO-like PAS domain FDV79_16550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_16550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV79_16560 PF04102 SlyX FDV79_16565 PF01112 Asparaginase FDV79_16575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_16585 PF00999 Sodium/hydrogen exchanger family FDV79_16585 PF02254 TrkA-N domain FDV79_16590 PF02525 Flavodoxin-like fold FDV79_16600 PF00005 ABC transporter FDV79_16600 PF12848 ABC transporter FDV79_16610 PF00561 alpha/beta hydrolase fold FDV79_16615 PF06794 Uncharacterised protein family (UPF0270) FDV79_16620 PF00485 Phosphoribulokinase / Uridine kinase family FDV79_16625 PF13545 Crp-like helix-turn-helix domain FDV79_16625 PF00027 Cyclic nucleotide-binding domain FDV79_16635 PF00171 Aldehyde dehydrogenase family FDV79_16640 PF04958 Arginine N-succinyltransferase beta subunit FDV79_16645 PF00202 Aminotransferase class-III FDV79_16650 PF00117 Glutamine amidotransferase class-I FDV79_16680 PF00579 tRNA synthetases class I (W and Y) FDV79_16685 PF13419 Haloacid dehalogenase-like hydrolase FDV79_16690 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDV79_16690 PF00588 SpoU rRNA Methylase family FDV79_16695 PF08461 Ribonuclease R winged-helix domain FDV79_16695 PF08206 Ribonuclease B OB domain FDV79_16695 PF00575 S1 RNA binding domain FDV79_16695 PF00773 RNB domain FDV79_16695 PF17876 Cold shock domain FDV79_16700 PF02082 Transcriptional regulator FDV79_16705 PF00175 Oxidoreductase NAD-binding domain FDV79_16705 PF00970 Oxidoreductase FAD-binding domain FDV79_16705 PF00042 Globin FDV79_16710 PF08238 Sel1 repeat FDV79_16720 PF00709 Adenylosuccinate synthetase FDV79_16725 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FDV79_16730 PF01145 SPFH domain / Band 7 family FDV79_16735 PF01145 SPFH domain / Band 7 family FDV79_16735 PF12221 Bacterial membrane protein N terminal FDV79_16740 PF16360 GTP-binding GTPase Middle Region FDV79_16740 PF13167 GTP-binding GTPase N-terminal FDV79_16740 PF01926 50S ribosome-binding GTPase FDV79_16745 PF17209 Hfq protein FDV79_16755 PF08676 MutL C terminal dimerisation domain FDV79_16755 PF01119 DNA mismatch repair protein, C-terminal domain FDV79_16760 PF01520 N-acetylmuramoyl-L-alanine amidase FDV79_16765 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDV79_16770 PF08331 Domain of unknown function (DUF1730) FDV79_16840 PF00929 Exonuclease FDV79_16845 PF03193 RsgA GTPase FDV79_16850 PF02666 Phosphatidylserine decarboxylase FDV79_16855 PF00939 Sodium:sulfate symporter transmembrane region FDV79_16860 PF00672 HAMP domain FDV79_16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_16870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDV79_16870 PF01676 Metalloenzyme superfamily FDV79_16880 PF00581 Rhodanese-like domain FDV79_16885 PF02556 Preprotein translocase subunit SecB FDV79_16890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDV79_16890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDV79_16895 PF06426 Serine acetyltransferase, N-terminal FDV79_16895 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_16900 PF01551 Peptidase family M23 FDV79_16910 PF00440 Bacterial regulatory proteins, tetR family FDV79_16910 PF08360 QacR-like protein, C-terminal region FDV79_16920 PF00152 tRNA synthetases class II (D, K and N) FDV79_16930 PF02910 Fumarate reductase flavoprotein C-term FDV79_16930 PF00890 FAD binding domain FDV79_16935 PF13085 2Fe-2S iron-sulfur cluster binding domain FDV79_16935 PF13183 4Fe-4S dicluster domain FDV79_16940 PF02300 Fumarate reductase subunit C FDV79_16945 PF02313 Fumarate reductase subunit D FDV79_16955 PF09285 Elongation factor P, C-terminal FDV79_16955 PF08207 Elongation factor P (EF-P) KOW-like domain FDV79_16955 PF01132 Elongation factor P (EF-P) OB domain FDV79_16960 PF04055 Radical SAM superfamily FDV79_16970 PF00842 Alanine racemase, C-terminal domain FDV79_16970 PF01168 Alanine racemase, N-terminal domain FDV79_16975 PF02308 MgtC family FDV79_16985 PF00118 TCP-1/cpn60 chaperonin family FDV79_16990 PF00166 Chaperonin 10 Kd subunit FDV79_16995 PF01554 MatE FDV79_17000 PF00365 Phosphofructokinase FDV79_17005 PF16916 Dimerisation domain of Zinc Transporter FDV79_17005 PF01545 Cation efflux family FDV79_17010 PF07813 LTXXQ motif family protein FDV79_17020 PF00072 Response regulator receiver domain FDV79_17020 PF00486 Transcriptional regulatory protein, C terminal FDV79_17025 PF00512 His Kinase A (phospho-acceptor) domain FDV79_17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_17025 PF00672 HAMP domain FDV79_17025 PF16527 Two-component sensor protein CpxA, periplasmic domain FDV79_17030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDV79_17030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDV79_17035 PF00588 SpoU rRNA Methylase family FDV79_17040 PF04186 FxsA cytoplasmic membrane protein FDV79_17070 PF13419 Haloacid dehalogenase-like hydrolase FDV79_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17085 PF03466 LysR substrate binding domain FDV79_17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17095 PF03466 LysR substrate binding domain FDV79_17100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_17105 PF01661 Macro domain FDV79_17110 PF01204 Trehalase FDV79_17120 PF12706 Beta-lactamase superfamily domain FDV79_17130 PF07690 Major Facilitator Superfamily FDV79_17135 PF13533 Biotin-lipoyl like FDV79_17140 PF03922 OmpW family FDV79_17145 PF13599 Pentapeptide repeats (9 copies) FDV79_17160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDV79_17160 PF18416 N-acetylglucosamine binding protein domain 2 FDV79_17165 PF01037 Lrp/AsnC ligand binding domain FDV79_17170 PF01810 LysE type translocator FDV79_17175 PF04954 Siderophore-interacting protein FDV79_17175 PF08021 Siderophore-interacting FAD-binding domain FDV79_17180 PF14583 Oligogalacturonate lyase FDV79_17185 PF00474 Sodium:solute symporter family FDV79_17190 PF13229 Right handed beta helix region FDV79_17205 PF01081 KDPG and KHG aldolase FDV79_17210 PF00294 pfkB family carbohydrate kinase FDV79_17225 PF07883 Cupin domain FDV79_17230 PF10688 Bacterial inner membrane protein FDV79_17240 PF09339 IclR helix-turn-helix domain FDV79_17240 PF01614 Bacterial transcriptional regulator FDV79_17255 PF03466 LysR substrate binding domain FDV79_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17260 PF00797 N-acetyltransferase FDV79_17265 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_17265 PF00107 Zinc-binding dehydrogenase FDV79_17270 PF00756 Putative esterase FDV79_17280 PF17152 Periplasmic sensor domain FDV79_17280 PF00990 Diguanylate cyclase, GGDEF domain FDV79_17295 PF03466 LysR substrate binding domain FDV79_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17310 PF00849 RNA pseudouridylate synthase FDV79_17315 PF01554 MatE FDV79_17325 PF00563 EAL domain FDV79_17325 PF00990 Diguanylate cyclase, GGDEF domain FDV79_17335 PF06865 Pyrimidine/purine nucleoside phosphorylase FDV79_17345 PF08329 Chitinase A, N-terminal domain FDV79_17345 PF00704 Glycosyl hydrolases family 18 FDV79_17365 PF03600 Citrate transporter FDV79_17375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FDV79_17385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDV79_17385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDV79_17390 PF06029 AlkA N-terminal domain FDV79_17390 PF00730 HhH-GPD superfamily base excision DNA repair protein FDV79_17405 PF07681 DoxX FDV79_17410 PF17954 Quercetinase C-terminal cupin domain FDV79_17410 PF02678 Pirin FDV79_17415 PF03466 LysR substrate binding domain FDV79_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDV79_17445 PF03616 Sodium/glutamate symporter FDV79_17450 PF00392 Bacterial regulatory proteins, gntR family FDV79_17450 PF00155 Aminotransferase class I and II FDV79_17455 PF00005 ABC transporter FDV79_17465 PF03616 Sodium/glutamate symporter FDV79_17480 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_17495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_17495 PF17200 Single Cache domain 2 FDV79_17495 PF00672 HAMP domain FDV79_17500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDV79_17510 PF00072 Response regulator receiver domain FDV79_17510 PF04397 LytTr DNA-binding domain FDV79_17515 PF06580 Histidine kinase FDV79_17515 PF13492 GAF domain FDV79_17515 PF07694 5TMR of 5TMR-LYT FDV79_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_17535 PF00005 ABC transporter FDV79_17550 PF01098 Cell cycle protein FDV79_17555 PF01709 Transcriptional regulator FDV79_17565 PF17149 Periplasmic sensor domain found in signal transduction proteins FDV79_17565 PF00672 HAMP domain FDV79_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_17565 PF00512 His Kinase A (phospho-acceptor) domain FDV79_17565 PF01627 Hpt domain FDV79_17565 PF00072 Response regulator receiver domain FDV79_17580 PF08719 Domain of unknown function (DUF1768) FDV79_17580 PF00925 GTP cyclohydrolase II FDV79_17590 PF00005 ABC transporter FDV79_17590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_17595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_17595 PF00005 ABC transporter FDV79_17610 PF13614 AAA domain FDV79_17610 PF18607 ParA helix turn helix domain FDV79_17615 PF02195 ParB-like nuclease domain FDV79_17615 PF08775 ParB family FDV79_17620 PF05127 Helicase FDV79_17620 PF13718 GNAT acetyltransferase 2 FDV79_17630 PF00132 Bacterial transferase hexapeptide (six repeats) FDV79_17640 PF03575 Peptidase family S51 FDV79_17645 PF00267 Gram-negative porin FDV79_17650 PF00367 phosphotransferase system, EIIB FDV79_17650 PF02378 Phosphotransferase system, EIIC FDV79_17655 PF01380 SIS domain FDV79_17665 PF01380 SIS domain FDV79_17665 PF01418 Helix-turn-helix domain, rpiR family FDV79_17670 PF00246 Zinc carboxypeptidase FDV79_17675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_17680 PF03358 NADPH-dependent FMN reductase FDV79_17690 PF00664 ABC transporter transmembrane region FDV79_17690 PF03412 Peptidase C39 family FDV79_17690 PF00005 ABC transporter FDV79_17705 PF00529 HlyD membrane-fusion protein of T1SS FDV79_17710 PF02954 Bacterial regulatory protein, Fis family FDV79_17710 PF00072 Response regulator receiver domain FDV79_17710 PF00158 Sigma-54 interaction domain FDV79_17715 PF02743 Cache domain FDV79_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_17715 PF00512 His Kinase A (phospho-acceptor) domain FDV79_17720 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDV79_17720 PF01243 Pyridoxamine 5'-phosphate oxidase FDV79_17735 PF12833 Helix-turn-helix domain FDV79_17740 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDV79_17740 PF00171 Aldehyde dehydrogenase family FDV79_17740 PF01619 Proline dehydrogenase FDV79_17740 PF14850 DNA-binding domain of Proline dehydrogenase FDV79_17750 PF00474 Sodium:solute symporter family FDV79_17785 PF01037 Lrp/AsnC ligand binding domain FDV79_17795 PF00664 ABC transporter transmembrane region FDV79_17795 PF00005 ABC transporter FDV79_17805 PF12833 Helix-turn-helix domain FDV79_17805 PF06719 AraC-type transcriptional regulator N-terminus FDV79_17825 PF00271 Helicase conserved C-terminal domain FDV79_17825 PF00270 DEAD/DEAH box helicase FDV79_17830 PF03473 MOSC domain FDV79_17830 PF03475 3-alpha domain FDV79_17845 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDV79_17845 PF02056 Family 4 glycosyl hydrolase FDV79_17850 PF03466 LysR substrate binding domain FDV79_17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17855 PF02743 Cache domain FDV79_17855 PF00672 HAMP domain FDV79_17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_17870 PF08281 Sigma-70, region 4 FDV79_17870 PF04542 Sigma-70 region 2 FDV79_17875 PF01965 DJ-1/PfpI family FDV79_17875 PF12833 Helix-turn-helix domain FDV79_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_17885 PF03466 LysR substrate binding domain FDV79_17905 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_17905 PF13192 Thioredoxin domain FDV79_17910 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDV79_17910 PF00578 AhpC/TSA family FDV79_17915 PF01047 MarR family FDV79_17920 PF02566 OsmC-like protein FDV79_17940 PF00535 Glycosyl transferase family 2 FDV79_17950 PF08241 Methyltransferase domain FDV79_17970 PF02378 Phosphotransferase system, EIIC FDV79_17970 PF00367 phosphotransferase system, EIIB FDV79_17980 PF00072 Response regulator receiver domain FDV79_17980 PF00486 Transcriptional regulatory protein, C terminal FDV79_17985 PF00512 His Kinase A (phospho-acceptor) domain FDV79_17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_17985 PF08521 Two-component sensor kinase N-terminal FDV79_17990 PF01547 Bacterial extracellular solute-binding protein FDV79_17995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDV79_17995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV79_18000 PF04183 IucA / IucC family FDV79_18000 PF06276 Ferric iron reductase FhuF-like transporter FDV79_18010 PF04183 IucA / IucC family FDV79_18010 PF06276 Ferric iron reductase FhuF-like transporter FDV79_18015 PF02655 ATP-grasp domain FDV79_18015 PF00206 Lyase FDV79_18020 PF00593 TonB dependent receptor FDV79_18020 PF07715 TonB-dependent Receptor Plug Domain FDV79_18025 PF07715 TonB-dependent Receptor Plug Domain FDV79_18025 PF00593 TonB dependent receptor FDV79_18025 PF07660 Secretin and TonB N terminus short domain FDV79_18030 PF01497 Periplasmic binding protein FDV79_18035 PF01032 FecCD transport family FDV79_18040 PF01032 FecCD transport family FDV79_18045 PF00005 ABC transporter FDV79_18050 PF00672 HAMP domain FDV79_18050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_18050 PF17200 Single Cache domain 2 FDV79_18055 PF00675 Insulinase (Peptidase family M16) FDV79_18055 PF05193 Peptidase M16 inactive domain FDV79_18065 PF04225 Opacity-associated protein A LysM-like domain FDV79_18065 PF01551 Peptidase family M23 FDV79_18075 PF07690 Major Facilitator Superfamily FDV79_18085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV79_18085 PF00128 Alpha amylase, catalytic domain FDV79_18090 PF02264 LamB porin FDV79_18105 PF00128 Alpha amylase, catalytic domain FDV79_18105 PF16657 Maltogenic Amylase, C-terminal domain FDV79_18105 PF02903 Alpha amylase, N-terminal ig-like domain FDV79_18115 PF04231 Endonuclease I FDV79_18120 PF17967 Pullulanase N2 domain FDV79_18120 PF11852 Domain of unknown function (DUF3372) FDV79_18120 PF03714 Bacterial pullanase-associated domain FDV79_18120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV79_18120 PF18494 Pullulanase Ins domain FDV79_18135 PF01276 Orn/Lys/Arg decarboxylase, major domain FDV79_18135 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDV79_18135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDV79_18140 PF13520 Amino acid permease FDV79_18150 PF08543 Phosphomethylpyrimidine kinase FDV79_18160 PF00375 Sodium:dicarboxylate symporter family FDV79_18165 PF03193 RsgA GTPase FDV79_18170 PF02378 Phosphotransferase system, EIIC FDV79_18170 PF00367 phosphotransferase system, EIIB FDV79_18180 PF02630 SCO1/SenC FDV79_18195 PF17874 MalT-like TPR region FDV79_18195 PF00196 Bacterial regulatory proteins, luxR family FDV79_18210 PF00343 Carbohydrate phosphorylase FDV79_18215 PF02446 4-alpha-glucanotransferase FDV79_18220 PF02806 Alpha amylase, C-terminal all-beta domain FDV79_18220 PF00128 Alpha amylase, catalytic domain FDV79_18220 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDV79_18225 PF00912 Transglycosylase FDV79_18230 PF00128 Alpha amylase, catalytic domain FDV79_18245 PF07670 Nucleoside recognition FDV79_18250 PF07670 Nucleoside recognition FDV79_18255 PF07687 Peptidase dimerisation domain FDV79_18255 PF01546 Peptidase family M20/M25/M40 FDV79_18260 PF06803 Protein of unknown function (DUF1232) FDV79_18265 PF00375 Sodium:dicarboxylate symporter family FDV79_18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18275 PF03466 LysR substrate binding domain FDV79_18280 PF08803 Putative mono-oxygenase ydhR FDV79_18290 PF13614 AAA domain FDV79_18290 PF13807 G-rich domain on putative tyrosine kinase FDV79_18290 PF02706 Chain length determinant protein FDV79_18295 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDV79_18300 PF10531 SLBB domain FDV79_18300 PF02563 Polysaccharide biosynthesis/export protein FDV79_18300 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FDV79_18305 PF00881 Nitroreductase family FDV79_18310 PF01914 MarC family integral membrane protein FDV79_18315 PF01734 Patatin-like phospholipase FDV79_18320 PF18416 N-acetylglucosamine binding protein domain 2 FDV79_18320 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDV79_18335 PF00561 alpha/beta hydrolase fold FDV79_18340 PF07943 Penicillin-binding protein 5, C-terminal domain FDV79_18340 PF00768 D-alanyl-D-alanine carboxypeptidase FDV79_18345 PF00686 Starch binding domain FDV79_18345 PF00128 Alpha amylase, catalytic domain FDV79_18350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDV79_18350 PF12833 Helix-turn-helix domain FDV79_18355 PF00881 Nitroreductase family FDV79_18365 PF03466 LysR substrate binding domain FDV79_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18370 PF09905 DNA-binding protein VF530 FDV79_18380 PF00970 Oxidoreductase FAD-binding domain FDV79_18380 PF00175 Oxidoreductase NAD-binding domain FDV79_18390 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDV79_18395 PF01594 AI-2E family transporter FDV79_18405 PF13533 Biotin-lipoyl like FDV79_18430 PF00892 EamA-like transporter family FDV79_18435 PF03466 LysR substrate binding domain FDV79_18435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18440 PF07690 Major Facilitator Superfamily FDV79_18450 PF00583 Acetyltransferase (GNAT) family FDV79_18460 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDV79_18465 PF04055 Radical SAM superfamily FDV79_18470 PF02901 Pyruvate formate lyase-like FDV79_18470 PF01228 Glycine radical FDV79_18510 PF08000 Bacterial PH domain FDV79_18520 PF00691 OmpA family FDV79_18520 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDV79_18525 PF01618 MotA/TolQ/ExbB proton channel family FDV79_18530 PF04542 Sigma-70 region 2 FDV79_18530 PF04545 Sigma-70, region 4 FDV79_18535 PF03748 Flagellar basal body-associated protein FliL FDV79_18550 PF02561 Flagellar protein FliS FDV79_18555 PF07195 Flagellar hook-associated protein 2 C-terminus FDV79_18555 PF07196 Flagellin hook IN motif FDV79_18555 PF02465 Flagellar hook-associated protein 2 N-terminus FDV79_18565 PF00700 Bacterial flagellin C-terminal helical region FDV79_18565 PF00669 Bacterial flagellin N-terminal helical region FDV79_18575 PF00771 FHIPEP family FDV79_18580 PF01312 FlhB HrpN YscU SpaS Family FDV79_18585 PF01311 Bacterial export proteins, family 1 FDV79_18590 PF01313 Bacterial export proteins, family 3 FDV79_18595 PF00813 FliP family FDV79_18600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDV79_18615 PF02954 Bacterial regulatory protein, Fis family FDV79_18615 PF00072 Response regulator receiver domain FDV79_18615 PF00158 Sigma-54 interaction domain FDV79_18620 PF02049 Flagellar hook-basal body complex protein FliE FDV79_18625 PF08345 Flagellar M-ring protein C-terminal FDV79_18625 PF01514 Secretory protein of YscJ/FliF family FDV79_18630 PF14842 FliG N-terminal domain FDV79_18630 PF01706 FliG C-terminal domain FDV79_18630 PF14841 FliG middle domain FDV79_18640 PF18269 T3SS EscN ATPase C-terminal domain FDV79_18640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDV79_18655 PF03466 LysR substrate binding domain FDV79_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_18695 PF03466 LysR substrate binding domain FDV79_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18725 PF00072 Response regulator receiver domain FDV79_18725 PF00486 Transcriptional regulatory protein, C terminal FDV79_18730 PF00072 Response regulator receiver domain FDV79_18730 PF08448 PAS fold FDV79_18730 PF00512 His Kinase A (phospho-acceptor) domain FDV79_18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_18730 PF13426 PAS domain FDV79_18735 PF00080 Copper/zinc superoxide dismutase (SODC) FDV79_18740 PF00266 Aminotransferase class-V FDV79_18745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_18750 PF00563 EAL domain FDV79_18750 PF03707 Bacterial signalling protein N terminal repeat FDV79_18750 PF00990 Diguanylate cyclase, GGDEF domain FDV79_18755 PF00155 Aminotransferase class I and II FDV79_18760 PF00107 Zinc-binding dehydrogenase FDV79_18760 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_18795 PF00194 Eukaryotic-type carbonic anhydrase FDV79_18800 PF00924 Mechanosensitive ion channel FDV79_18810 PF01070 FMN-dependent dehydrogenase FDV79_18815 PF02652 L-lactate permease FDV79_18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_18820 PF03466 LysR substrate binding domain FDV79_18825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV79_18825 PF00326 Prolyl oligopeptidase family FDV79_18830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDV79_18830 PF00005 ABC transporter FDV79_18840 PF05362 Lon protease (S16) C-terminal proteolytic domain FDV79_18840 PF13654 AAA domain FDV79_18845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_18845 PF00672 HAMP domain FDV79_18850 PF07238 PilZ domain FDV79_18850 PF12945 Flagellar protein YcgR FDV79_18870 PF00583 Acetyltransferase (GNAT) family FDV79_18875 PF12800 4Fe-4S binding domain FDV79_18875 PF12838 4Fe-4S dicluster domain FDV79_18880 PF12801 4Fe-4S binding domain FDV79_18880 PF13237 4Fe-4S dicluster domain FDV79_18895 PF12558 ATP-binding cassette cobalt transporter FDV79_18895 PF00005 ABC transporter FDV79_18900 PF07155 ECF-type riboflavin transporter, S component FDV79_18905 PF00529 HlyD membrane-fusion protein of T1SS FDV79_18905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_18910 PF11742 Protein of unknown function (DUF3302) FDV79_18915 PF00990 Diguanylate cyclase, GGDEF domain FDV79_18930 PF01048 Phosphorylase superfamily FDV79_18940 PF08349 Protein of unknown function (DUF1722) FDV79_18945 PF13411 MerR HTH family regulatory protein FDV79_18950 PF03441 FAD binding domain of DNA photolyase FDV79_18950 PF00875 DNA photolyase FDV79_18955 PF03734 L,D-transpeptidase catalytic domain FDV79_18955 PF17969 L,D-transpeptidase C-terminal domain FDV79_18955 PF01476 LysM domain FDV79_18965 PF00271 Helicase conserved C-terminal domain FDV79_18965 PF00270 DEAD/DEAH box helicase FDV79_18970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV79_18970 PF00326 Prolyl oligopeptidase family FDV79_18975 PF00593 TonB dependent receptor FDV79_18975 PF07715 TonB-dependent Receptor Plug Domain FDV79_18995 PF00672 HAMP domain FDV79_18995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_19000 PF12849 PBP superfamily domain FDV79_19005 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_19010 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_19015 PF00005 ABC transporter FDV79_19035 PF13519 von Willebrand factor type A domain FDV79_19035 PF07584 Aerotolerance regulator N-terminal FDV79_19040 PF13519 von Willebrand factor type A domain FDV79_19050 PF01882 Protein of unknown function DUF58 FDV79_19055 PF17863 AAA lid domain FDV79_19055 PF07726 ATPase family associated with various cellular activities (AAA) FDV79_19065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_19065 PF02743 Cache domain FDV79_19065 PF00672 HAMP domain FDV79_19075 PF00196 Bacterial regulatory proteins, luxR family FDV79_19080 PF00196 Bacterial regulatory proteins, luxR family FDV79_19090 PF00005 ABC transporter FDV79_19090 PF00664 ABC transporter transmembrane region FDV79_19095 PF00529 HlyD membrane-fusion protein of T1SS FDV79_19110 PF00691 OmpA family FDV79_19120 PF01032 FecCD transport family FDV79_19125 PF01497 Periplasmic binding protein FDV79_19130 PF00005 ABC transporter FDV79_19135 PF07715 TonB-dependent Receptor Plug Domain FDV79_19135 PF00593 TonB dependent receptor FDV79_19140 PF00005 ABC transporter FDV79_19140 PF00664 ABC transporter transmembrane region FDV79_19145 PF02702 Osmosensitive K+ channel His kinase sensor domain FDV79_19145 PF00512 His Kinase A (phospho-acceptor) domain FDV79_19145 PF13493 Domain of unknown function (DUF4118) FDV79_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_19150 PF00072 Response regulator receiver domain FDV79_19150 PF00486 Transcriptional regulatory protein, C terminal FDV79_19155 PF02080 TrkA-C domain FDV79_19155 PF02254 TrkA-N domain FDV79_19160 PF02386 Cation transport protein FDV79_19165 PF03707 Bacterial signalling protein N terminal repeat FDV79_19165 PF00990 Diguanylate cyclase, GGDEF domain FDV79_19165 PF00563 EAL domain FDV79_19170 PF00127 Copper binding proteins, plastocyanin/azurin family FDV79_19175 PF13419 Haloacid dehalogenase-like hydrolase FDV79_19185 PF01238 Phosphomannose isomerase type I FDV79_19190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_19190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_19195 PF12833 Helix-turn-helix domain FDV79_19205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_19215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV79_19215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV79_19220 PF06628 Catalase-related immune-responsive FDV79_19220 PF00199 Catalase FDV79_19225 PF13417 Glutathione S-transferase, N-terminal domain FDV79_19230 PF16884 N-terminal domain of oxidoreductase FDV79_19230 PF00107 Zinc-binding dehydrogenase FDV79_19235 PF00440 Bacterial regulatory proteins, tetR family FDV79_19235 PF16925 Tetracyclin repressor-like, C-terminal domain FDV79_19270 PF00534 Glycosyl transferases group 1 FDV79_19270 PF13439 Glycosyltransferase Family 4 FDV79_19280 PF02706 Chain length determinant protein FDV79_19280 PF13614 AAA domain FDV79_19280 PF13807 G-rich domain on putative tyrosine kinase FDV79_19295 PF02397 Bacterial sugar transferase FDV79_19300 PF00005 ABC transporter FDV79_19300 PF08402 TOBE domain FDV79_19305 PF01547 Bacterial extracellular solute-binding protein FDV79_19310 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_19310 PF14785 Maltose transport system permease protein MalF P2 domain FDV79_19315 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_19375 PF08502 LeuA allosteric (dimerisation) domain FDV79_19375 PF00682 HMGL-like FDV79_19390 PF01872 RibD C-terminal domain FDV79_19395 PF00440 Bacterial regulatory proteins, tetR family FDV79_19395 PF02909 Tetracyclin repressor-like, C-terminal domain FDV79_19400 PF02798 Glutathione S-transferase, N-terminal domain FDV79_19415 PF00768 D-alanyl-D-alanine carboxypeptidase FDV79_19415 PF07943 Penicillin-binding protein 5, C-terminal domain FDV79_19435 PF00462 Glutaredoxin FDV79_19435 PF08534 Redoxin FDV79_19440 PF00962 Adenosine/AMP deaminase FDV79_19460 PF00313 'Cold-shock' DNA-binding domain FDV79_19465 PF05726 Pirin C-terminal cupin domain FDV79_19465 PF02678 Pirin FDV79_19470 PF01734 Patatin-like phospholipase FDV79_19480 PF01047 MarR family FDV79_19495 PF07690 Major Facilitator Superfamily FDV79_19505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDV79_19510 PF00884 Sulfatase FDV79_19510 PF08019 Phosphoethanolamine transferase EptA/EptB FDV79_19515 PF01219 Prokaryotic diacylglycerol kinase FDV79_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_19525 PF00512 His Kinase A (phospho-acceptor) domain FDV79_19525 PF00672 HAMP domain FDV79_19530 PF00486 Transcriptional regulatory protein, C terminal FDV79_19530 PF00072 Response regulator receiver domain FDV79_19535 PF00106 short chain dehydrogenase FDV79_19555 PF01323 DSBA-like thioredoxin domain FDV79_19570 PF00255 Glutathione peroxidase FDV79_19575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDV79_19585 PF07690 Major Facilitator Superfamily FDV79_19600 PF01966 HD domain FDV79_19610 PF07969 Amidohydrolase family FDV79_19615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDV79_19625 PF00571 CBS domain FDV79_19625 PF03448 MgtE intracellular N domain FDV79_19625 PF01769 Divalent cation transporter FDV79_19630 PF03109 ABC1 family FDV79_19640 PF00392 Bacterial regulatory proteins, gntR family FDV79_19640 PF00155 Aminotransferase class I and II FDV79_19645 PF13520 Amino acid permease FDV79_19655 PF01037 Lrp/AsnC ligand binding domain FDV79_19655 PF13404 AsnC-type helix-turn-helix domain FDV79_19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_19660 PF03466 LysR substrate binding domain FDV79_19675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDV79_19675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDV79_19680 PF00672 HAMP domain FDV79_19680 PF00512 His Kinase A (phospho-acceptor) domain FDV79_19680 PF01627 Hpt domain FDV79_19680 PF00072 Response regulator receiver domain FDV79_19680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV79_19680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_19685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDV79_19690 PF01554 MatE FDV79_19695 PF04363 Protein of unknown function (DUF496) FDV79_19710 PF04337 Protein of unknown function, DUF480 FDV79_19715 PF01541 GIY-YIG catalytic domain FDV79_19720 PF13407 Periplasmic binding protein domain FDV79_19725 PF09308 LuxQ, periplasmic FDV79_19725 PF00072 Response regulator receiver domain FDV79_19725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_19725 PF00512 His Kinase A (phospho-acceptor) domain FDV79_19735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_19735 PF00529 HlyD membrane-fusion protein of T1SS FDV79_19755 PF01037 Lrp/AsnC ligand binding domain FDV79_19785 PF13721 SecD export protein N-terminal TM region FDV79_19785 PF02355 Protein export membrane protein FDV79_19785 PF07549 SecD/SecF GG Motif FDV79_19790 PF07549 SecD/SecF GG Motif FDV79_19790 PF02355 Protein export membrane protein FDV79_19805 PF00106 short chain dehydrogenase FDV79_19810 PF02803 Thiolase, C-terminal domain FDV79_19810 PF00108 Thiolase, N-terminal domain FDV79_19820 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FDV79_19820 PF00561 alpha/beta hydrolase fold FDV79_19830 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV79_19835 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FDV79_19840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_19840 PF00384 Molybdopterin oxidoreductase FDV79_19840 PF01568 Molydopterin dinucleotide binding domain FDV79_19850 PF13187 4Fe-4S dicluster domain FDV79_19850 PF12838 4Fe-4S dicluster domain FDV79_19855 PF07730 Histidine kinase FDV79_19855 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDV79_19855 PF00672 HAMP domain FDV79_19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_19860 PF00196 Bacterial regulatory proteins, luxR family FDV79_19860 PF00072 Response regulator receiver domain FDV79_19875 PF07687 Peptidase dimerisation domain FDV79_19875 PF01546 Peptidase family M20/M25/M40 FDV79_19880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV79_19885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_19890 PF00873 AcrB/AcrD/AcrF family FDV79_19895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_19895 PF00672 HAMP domain FDV79_19895 PF12729 Four helix bundle sensory module for signal transduction FDV79_19900 PF00472 RF-1 domain FDV79_19905 PF13419 Haloacid dehalogenase-like hydrolase FDV79_19910 PF01389 OmpA-like transmembrane domain FDV79_19910 PF00691 OmpA family FDV79_19920 PF00793 DAHP synthetase I family FDV79_19925 PF07690 Major Facilitator Superfamily FDV79_19935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_19935 PF08447 PAS fold FDV79_19940 PF00456 Transketolase, thiamine diphosphate binding domain FDV79_19940 PF02780 Transketolase, C-terminal domain FDV79_19940 PF02779 Transketolase, pyrimidine binding domain FDV79_19945 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDV79_19965 PF00704 Glycosyl hydrolases family 18 FDV79_19965 PF08329 Chitinase A, N-terminal domain FDV79_19970 PF03707 Bacterial signalling protein N terminal repeat FDV79_19970 PF00990 Diguanylate cyclase, GGDEF domain FDV79_19970 PF00563 EAL domain FDV79_19975 PF00581 Rhodanese-like domain FDV79_19995 PF00899 ThiF family FDV79_20000 PF00994 Probable molybdopterin binding domain FDV79_20000 PF03453 MoeA N-terminal region (domain I and II) FDV79_20000 PF03454 MoeA C-terminal region (domain IV) FDV79_20005 PF01227 GTP cyclohydrolase I FDV79_20010 PF01566 Natural resistance-associated macrophage protein FDV79_20020 PF00654 Voltage gated chloride channel FDV79_20035 PF00248 Aldo/keto reductase family FDV79_20040 PF00072 Response regulator receiver domain FDV79_20050 PF01256 Carbohydrate kinase FDV79_20050 PF03853 YjeF-related protein N-terminus FDV79_20055 PF00478 IMP dehydrogenase / GMP reductase domain FDV79_20060 PF00501 AMP-binding enzyme FDV79_20060 PF13193 AMP-binding enzyme C-terminal domain FDV79_20065 PF00766 Electron transfer flavoprotein FAD-binding domain FDV79_20065 PF01012 Electron transfer flavoprotein domain FDV79_20070 PF01012 Electron transfer flavoprotein domain FDV79_20085 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDV79_20085 PF00005 ABC transporter FDV79_20110 PF00005 ABC transporter FDV79_20115 PF00501 AMP-binding enzyme FDV79_20115 PF14535 AMP-binding enzyme C-terminal domain FDV79_20130 PF00034 Cytochrome c FDV79_20140 PF13411 MerR HTH family regulatory protein FDV79_20145 PF02627 Carboxymuconolactone decarboxylase family FDV79_20150 PF02567 Phenazine biosynthesis-like protein FDV79_20160 PF02322 Cytochrome bd terminal oxidase subunit II FDV79_20165 PF01654 Cytochrome bd terminal oxidase subunit I FDV79_20170 PF00155 Aminotransferase class I and II FDV79_20170 PF00392 Bacterial regulatory proteins, gntR family FDV79_20175 PF12464 Maltose acetyltransferase FDV79_20175 PF14602 Hexapeptide repeat of succinyl-transferase FDV79_20185 PF12794 Mechanosensitive ion channel inner membrane domain 1 FDV79_20185 PF12795 Mechanosensitive ion channel porin domain FDV79_20185 PF00924 Mechanosensitive ion channel FDV79_20200 PF00672 HAMP domain FDV79_20200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_20200 PF00512 His Kinase A (phospho-acceptor) domain FDV79_20200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDV79_20200 PF00072 Response regulator receiver domain FDV79_20200 PF01627 Hpt domain FDV79_20205 PF00682 HMGL-like FDV79_20210 PF00289 Biotin carboxylase, N-terminal domain FDV79_20210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDV79_20210 PF02785 Biotin carboxylase C-terminal domain FDV79_20210 PF00364 Biotin-requiring enzyme FDV79_20210 PF18140 Propionyl-coenzyme A carboxylase BT domain FDV79_20215 PF00378 Enoyl-CoA hydratase/isomerase FDV79_20220 PF01039 Carboxyl transferase domain FDV79_20225 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_20225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_20225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_20230 PF00376 MerR family regulatory protein FDV79_20230 PF09278 MerR, DNA binding FDV79_20235 PF00108 Thiolase, N-terminal domain FDV79_20235 PF02803 Thiolase, C-terminal domain FDV79_20240 PF00171 Aldehyde dehydrogenase family FDV79_20245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_20245 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_20245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_20250 PF00378 Enoyl-CoA hydratase/isomerase FDV79_20260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV79_20260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV79_20275 PF17151 Periplasmic sensor domain FDV79_20275 PF00990 Diguanylate cyclase, GGDEF domain FDV79_20280 PF13977 BetI-type transcriptional repressor, C-terminal FDV79_20280 PF00440 Bacterial regulatory proteins, tetR family FDV79_20285 PF00171 Aldehyde dehydrogenase family FDV79_20290 PF00732 GMC oxidoreductase FDV79_20290 PF05199 GMC oxidoreductase FDV79_20295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDV79_20300 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_20305 PF00571 CBS domain FDV79_20305 PF00005 ABC transporter FDV79_20310 PF00881 Nitroreductase family FDV79_20320 PF16200 C-terminal region of band_7 FDV79_20320 PF01145 SPFH domain / Band 7 family FDV79_20330 PF13188 PAS domain FDV79_20330 PF03707 Bacterial signalling protein N terminal repeat FDV79_20330 PF00990 Diguanylate cyclase, GGDEF domain FDV79_20330 PF00563 EAL domain FDV79_20345 PF00034 Cytochrome c FDV79_20345 PF03150 Di-haem cytochrome c peroxidase FDV79_20350 PF00512 His Kinase A (phospho-acceptor) domain FDV79_20350 PF00072 Response regulator receiver domain FDV79_20350 PF09308 LuxQ, periplasmic FDV79_20350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_20365 PF04116 Fatty acid hydroxylase superfamily FDV79_20380 PF00589 Phage integrase family FDV79_20380 PF12167 Arm DNA-binding domain FDV79_20390 PF00005 ABC transporter FDV79_20410 PF18255 DNA processing protein A sterile alpha motif domain FDV79_20410 PF02481 DNA recombination-mediator protein A FDV79_20500 PF01048 Phosphorylase superfamily FDV79_20505 PF00563 EAL domain FDV79_20505 PF00990 Diguanylate cyclase, GGDEF domain FDV79_20510 PF05025 RbsD / FucU transport protein family FDV79_20515 PF00005 ABC transporter FDV79_20520 PF02653 Branched-chain amino acid transport system / permease component FDV79_20525 PF13407 Periplasmic binding protein domain FDV79_20530 PF00294 pfkB family carbohydrate kinase FDV79_20535 PF00356 Bacterial regulatory proteins, lacI family FDV79_20545 PF04973 Nicotinamide mononucleotide transporter FDV79_20550 PF01048 Phosphorylase superfamily FDV79_20570 PF00072 Response regulator receiver domain FDV79_20570 PF00486 Transcriptional regulatory protein, C terminal FDV79_20585 PF00245 Alkaline phosphatase FDV79_20595 PF00082 Subtilase family FDV79_20595 PF01483 Proprotein convertase P-domain FDV79_20605 PF00990 Diguanylate cyclase, GGDEF domain FDV79_20605 PF00072 Response regulator receiver domain FDV79_20615 PF03222 Tryptophan/tyrosine permease family FDV79_20620 PF00583 Acetyltransferase (GNAT) family FDV79_20625 PF00384 Molybdopterin oxidoreductase FDV79_20625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_20625 PF01568 Molydopterin dinucleotide binding domain FDV79_20630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV79_20630 PF14824 Sirohaem biosynthesis protein central FDV79_20630 PF10414 Sirohaem synthase dimerisation region FDV79_20635 PF02885 Glycosyl transferase family, helical bundle domain FDV79_20635 PF00591 Glycosyl transferase family, a/b domain FDV79_20645 PF01738 Dienelactone hydrolase family FDV79_20650 PF08376 Nitrate and nitrite sensing FDV79_20650 PF03861 ANTAR domain FDV79_20665 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_20670 PF00005 ABC transporter FDV79_20675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_20675 PF13806 Rieske-like [2Fe-2S] domain FDV79_20675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV79_20675 PF04324 BFD-like [2Fe-2S] binding domain FDV79_20675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV79_20675 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDV79_20690 PF08361 MAATS-type transcriptional repressor, C-terminal region FDV79_20690 PF00440 Bacterial regulatory proteins, tetR family FDV79_20705 PF00072 Response regulator receiver domain FDV79_20705 PF00211 Adenylate and Guanylate cyclase catalytic domain FDV79_20730 PF00069 Protein kinase domain FDV79_20730 PF03793 PASTA domain FDV79_20750 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDV79_20750 PF00691 OmpA family FDV79_20810 PF10431 C-terminal, D2-small domain, of ClpB protein FDV79_20810 PF00004 ATPase family associated with various cellular activities (AAA) FDV79_20810 PF07724 AAA domain (Cdc48 subfamily) FDV79_20810 PF17871 AAA lid domain FDV79_20820 PF16671 Actin cross-linking domain FDV79_20820 PF04717 Type VI secretion system, phage-baseplate injector FDV79_20835 PF00149 Calcineurin-like phosphoesterase FDV79_20835 PF12320 Type 5 capsule protein repressor C-terminal domain FDV79_20840 PF13476 AAA domain FDV79_20860 PF08212 Lipocalin-like domain FDV79_20870 PF07690 Major Facilitator Superfamily FDV79_20880 PF03606 C4-dicarboxylate anaerobic carrier FDV79_20890 PF00034 Cytochrome c FDV79_20895 PF01212 Beta-eliminating lyase FDV79_20905 PF17868 AAA lid domain FDV79_20905 PF12592 Protein of unknown function (DUF3763) FDV79_20905 PF07728 AAA domain (dynein-related subfamily) FDV79_20910 PF05762 VWA domain containing CoxE-like protein FDV79_20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_20930 PF03466 LysR substrate binding domain FDV79_20935 PF01565 FAD binding domain FDV79_20935 PF09330 D-lactate dehydrogenase, membrane binding FDV79_20955 PF01168 Alanine racemase, N-terminal domain FDV79_20955 PF00842 Alanine racemase, C-terminal domain FDV79_20960 PF00672 HAMP domain FDV79_20960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_20975 PF00128 Alpha amylase, catalytic domain FDV79_20975 PF09154 Domain of unknown function (DUF1939) FDV79_20995 PF06965 Na+/H+ antiporter 1 FDV79_20995 PF13462 Thioredoxin FDV79_21040 PF14760 Rnk N-terminus FDV79_21040 PF01272 Transcription elongation factor, GreA/GreB, C-term FDV79_21045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDV79_21045 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDV79_21045 PF04324 BFD-like [2Fe-2S] binding domain FDV79_21045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_21045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDV79_21050 PF13806 Rieske-like [2Fe-2S] domain FDV79_21055 PF01226 Formate/nitrite transporter FDV79_21060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDV79_21060 PF10414 Sirohaem synthase dimerisation region FDV79_21060 PF14824 Sirohaem biosynthesis protein central FDV79_21075 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDV79_21090 PF07715 TonB-dependent Receptor Plug Domain FDV79_21090 PF00593 TonB dependent receptor FDV79_21105 PF11756 Nitrous oxide-stimulated promoter FDV79_21110 PF01554 MatE FDV79_21115 PF07495 Y_Y_Y domain FDV79_21115 PF00072 Response regulator receiver domain FDV79_21115 PF07494 Two component regulator propeller FDV79_21115 PF12833 Helix-turn-helix domain FDV79_21115 PF00512 His Kinase A (phospho-acceptor) domain FDV79_21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_21120 PF07690 Major Facilitator Superfamily FDV79_21125 PF00085 Thioredoxin FDV79_21130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDV79_21130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDV79_21150 PF01238 Phosphomannose isomerase type I FDV79_21155 PF07690 Major Facilitator Superfamily FDV79_21160 PF05231 MASE1 FDV79_21160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_21160 PF07730 Histidine kinase FDV79_21165 PF00196 Bacterial regulatory proteins, luxR family FDV79_21165 PF00072 Response regulator receiver domain FDV79_21170 PF07690 Major Facilitator Superfamily FDV79_21175 PF02634 FdhD/NarQ family FDV79_21180 PF03466 LysR substrate binding domain FDV79_21180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_21190 PF00384 Molybdopterin oxidoreductase FDV79_21195 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDV79_21195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDV79_21210 PF04143 Sulphur transport FDV79_21220 PF00873 AcrB/AcrD/AcrF family FDV79_21225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_21235 PF13597 Anaerobic ribonucleoside-triphosphate reductase FDV79_21235 PF03477 ATP cone domain FDV79_21245 PF01554 MatE FDV79_21255 PF12833 Helix-turn-helix domain FDV79_21260 PF00155 Aminotransferase class I and II FDV79_21265 PF18030 RimK PreATP-grasp domain FDV79_21265 PF08443 RimK-like ATP-grasp domain FDV79_21275 PF04076 Bacterial OB fold (BOF) protein FDV79_21280 PF07685 CobB/CobQ-like glutamine amidotransferase domain FDV79_21290 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_21295 PF03459 TOBE domain FDV79_21295 PF00005 ABC transporter FDV79_21305 PF00360 Phytochrome region FDV79_21305 PF00990 Diguanylate cyclase, GGDEF domain FDV79_21305 PF01590 GAF domain FDV79_21305 PF00563 EAL domain FDV79_21315 PF00990 Diguanylate cyclase, GGDEF domain FDV79_21315 PF00072 Response regulator receiver domain FDV79_21330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDV79_21330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDV79_21330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDV79_21335 PF02233 NAD(P) transhydrogenase beta subunit FDV79_21345 PF00072 Response regulator receiver domain FDV79_21345 PF00486 Transcriptional regulatory protein, C terminal FDV79_21360 PF03701 Uncharacterised protein family (UPF0181) FDV79_21365 PF00582 Universal stress protein family FDV79_21375 PF03466 LysR substrate binding domain FDV79_21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_21395 PF01253 Translation initiation factor SUI1 FDV79_21405 PF01820 D-ala D-ala ligase N-terminus FDV79_21405 PF07478 D-ala D-ala ligase C-terminus FDV79_21415 PF00583 Acetyltransferase (GNAT) family FDV79_21415 PF13380 CoA binding domain FDV79_21415 PF13607 Succinyl-CoA ligase like flavodoxin domain FDV79_21420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_21420 PF03466 LysR substrate binding domain FDV79_21425 PF07715 TonB-dependent Receptor Plug Domain FDV79_21425 PF00593 TonB dependent receptor FDV79_21435 PF16363 GDP-mannose 4,6 dehydratase FDV79_21440 PF13426 PAS domain FDV79_21440 PF08447 PAS fold FDV79_21440 PF08448 PAS fold FDV79_21440 PF00990 Diguanylate cyclase, GGDEF domain FDV79_21440 PF05231 MASE1 FDV79_21440 PF00563 EAL domain FDV79_21445 PF03746 LamB/YcsF family FDV79_21450 PF02682 Carboxyltransferase domain, subdomain C and D FDV79_21455 PF02626 Carboxyltransferase domain, subdomain A and B FDV79_21460 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDV79_21460 PF01266 FAD dependent oxidoreductase FDV79_21470 PF00005 ABC transporter FDV79_21475 PF13472 GDSL-like Lipase/Acylhydrolase family FDV79_21480 PF07055 Enoyl reductase FAD binding domain FDV79_21480 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDV79_21480 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDV79_21485 PF00563 EAL domain FDV79_21485 PF13188 PAS domain FDV79_21485 PF00990 Diguanylate cyclase, GGDEF domain FDV79_21485 PF03707 Bacterial signalling protein N terminal repeat FDV79_21495 PF00684 DnaJ central domain FDV79_21495 PF01556 DnaJ C terminal domain FDV79_21495 PF00226 DnaJ domain FDV79_21520 PF12793 Sugar transport-related sRNA regulator N-term FDV79_21520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDV79_21530 PF03061 Thioesterase superfamily FDV79_21545 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV79_21550 PF12262 Bacterial virulence factor lipase N-terminal FDV79_21565 PF03741 Integral membrane protein TerC family FDV79_21570 PF00149 Calcineurin-like phosphoesterase FDV79_21570 PF02872 5'-nucleotidase, C-terminal domain FDV79_21575 PF11398 Protein of unknown function (DUF2813) FDV79_21580 PF06496 Protein of unknown function (DUF1097) FDV79_21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_21585 PF03466 LysR substrate binding domain FDV79_21590 PF01226 Formate/nitrite transporter FDV79_21595 PF04264 YceI-like domain FDV79_21600 PF01292 Prokaryotic cytochrome b561 FDV79_21615 PF12792 CSS motif domain associated with EAL FDV79_21615 PF00563 EAL domain FDV79_21620 PF00270 DEAD/DEAH box helicase FDV79_21620 PF00271 Helicase conserved C-terminal domain FDV79_21625 PF04336 Acyl carrier protein phosphodiesterase FDV79_21635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_21645 PF13419 Haloacid dehalogenase-like hydrolase FDV79_21655 PF11849 Domain of unknown function (DUF3369) FDV79_21675 PF00294 pfkB family carbohydrate kinase FDV79_21680 PF01268 Formate--tetrahydrofolate ligase FDV79_21685 PF00483 Nucleotidyl transferase FDV79_21690 PF06483 Chitinase C FDV79_21690 PF00704 Glycosyl hydrolases family 18 FDV79_21700 PF12833 Helix-turn-helix domain FDV79_21700 PF06719 AraC-type transcriptional regulator N-terminus FDV79_21705 PF00465 Iron-containing alcohol dehydrogenase FDV79_21715 PF00072 Response regulator receiver domain FDV79_21715 PF02954 Bacterial regulatory protein, Fis family FDV79_21715 PF14532 Sigma-54 interaction domain FDV79_21720 PF00512 His Kinase A (phospho-acceptor) domain FDV79_21720 PF00672 HAMP domain FDV79_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_21730 PF07690 Major Facilitator Superfamily FDV79_21735 PF02887 Pyruvate kinase, alpha/beta domain FDV79_21735 PF00224 Pyruvate kinase, barrel domain FDV79_21740 PF00005 ABC transporter FDV79_21745 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_21750 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_21755 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_21760 PF01590 GAF domain FDV79_21760 PF00563 EAL domain FDV79_21760 PF00990 Diguanylate cyclase, GGDEF domain FDV79_21760 PF00989 PAS fold FDV79_21780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV79_21780 PF00356 Bacterial regulatory proteins, lacI family FDV79_21785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_21785 PF00381 PTS HPr component phosphorylation site FDV79_21790 PF00294 pfkB family carbohydrate kinase FDV79_21795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_21795 PF02378 Phosphotransferase system, EIIC FDV79_21805 PF00873 AcrB/AcrD/AcrF family FDV79_21825 PF01571 Aminomethyltransferase folate-binding domain FDV79_21825 PF08669 Glycine cleavage T-protein C-terminal barrel domain FDV79_21835 PF00464 Serine hydroxymethyltransferase FDV79_21840 PF01597 Glycine cleavage H-protein FDV79_21845 PF02347 Glycine cleavage system P-protein FDV79_21870 PF01212 Beta-eliminating lyase FDV79_21875 PF17848 Acetyl-coA carboxylase zinc finger domain FDV79_21875 PF01039 Carboxyl transferase domain FDV79_21880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_21880 PF03466 LysR substrate binding domain FDV79_21885 PF11490 DNA polymerase III polC-type N-terminus II FDV79_21885 PF02811 PHP domain FDV79_21885 PF14579 Helix-hairpin-helix motif FDV79_21885 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDV79_21885 PF00929 Exonuclease FDV79_21885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDV79_21910 PF02253 Phospholipase A1 FDV79_21925 PF00376 MerR family regulatory protein FDV79_21925 PF09278 MerR, DNA binding FDV79_21930 PF01327 Polypeptide deformylase FDV79_21965 PF00571 CBS domain FDV79_21965 PF01769 Divalent cation transporter FDV79_21965 PF03448 MgtE intracellular N domain FDV79_21985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_21990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV79_22000 PF01757 Acyltransferase family FDV79_22010 PF09722 Protein of unknown function (DUF2384) FDV79_22015 PF00141 Peroxidase FDV79_22025 PF01645 Conserved region in glutamate synthase FDV79_22025 PF13187 4Fe-4S dicluster domain FDV79_22035 PF12431 Transcriptional regulator FDV79_22035 PF00072 Response regulator receiver domain FDV79_22040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDV79_22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_22040 PF00989 PAS fold FDV79_22040 PF17203 Single cache domain 3 FDV79_22045 PF00939 Sodium:sulfate symporter transmembrane region FDV79_22050 PF00171 Aldehyde dehydrogenase family FDV79_22070 PF00892 EamA-like transporter family FDV79_22075 PF00893 Small Multidrug Resistance protein FDV79_22080 PF07504 Fungalysin/Thermolysin Propeptide Motif FDV79_22080 PF03413 Peptidase propeptide and YPEB domain FDV79_22080 PF01447 Thermolysin metallopeptidase, catalytic domain FDV79_22080 PF02868 Thermolysin metallopeptidase, alpha-helical domain FDV79_22080 PF04151 Bacterial pre-peptidase C-terminal domain FDV79_22090 PF01569 PAP2 superfamily FDV79_22105 PF00892 EamA-like transporter family FDV79_22125 PF00072 Response regulator receiver domain FDV79_22125 PF01584 CheW-like domain FDV79_22150 PF00196 Bacterial regulatory proteins, luxR family FDV79_22150 PF00072 Response regulator receiver domain FDV79_22160 PF00990 Diguanylate cyclase, GGDEF domain FDV79_22165 PF00196 Bacterial regulatory proteins, luxR family FDV79_22165 PF00072 Response regulator receiver domain FDV79_22170 PF13188 PAS domain FDV79_22170 PF00563 EAL domain FDV79_22170 PF03707 Bacterial signalling protein N terminal repeat FDV79_22170 PF00990 Diguanylate cyclase, GGDEF domain FDV79_22175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_22175 PF09456 RcsC Alpha-Beta-Loop (ABL) FDV79_22175 PF00512 His Kinase A (phospho-acceptor) domain FDV79_22175 PF00072 Response regulator receiver domain FDV79_22185 PF03466 LysR substrate binding domain FDV79_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22190 PF03466 LysR substrate binding domain FDV79_22200 PF00691 OmpA family FDV79_22200 PF05736 OprF membrane domain FDV79_22235 PF00437 Type II/IV secretion system protein FDV79_22250 PF04972 BON domain FDV79_22250 PF13629 Pilus formation protein N terminal region FDV79_22250 PF00263 Bacterial type II and III secretion system protein FDV79_22270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22270 PF03466 LysR substrate binding domain FDV79_22275 PF12833 Helix-turn-helix domain FDV79_22285 PF01752 Collagenase FDV79_22285 PF08453 Peptidase family M9 N-terminal FDV79_22285 PF04151 Bacterial pre-peptidase C-terminal domain FDV79_22295 PF01926 50S ribosome-binding GTPase FDV79_22300 PF00155 Aminotransferase class I and II FDV79_22305 PF00072 Response regulator receiver domain FDV79_22305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_22315 PF00583 Acetyltransferase (GNAT) family FDV79_22315 PF00814 Glycoprotease family FDV79_22325 PF03606 C4-dicarboxylate anaerobic carrier FDV79_22330 PF04011 LemA family FDV79_22335 PF01435 Peptidase family M48 FDV79_22355 PF18081 Fanconi anemia-associated nuclease SAP domain FDV79_22355 PF08774 VRR-NUC domain FDV79_22365 PF13186 Iron-sulfur cluster-binding domain FDV79_22365 PF04055 Radical SAM superfamily FDV79_22385 PF04076 Bacterial OB fold (BOF) protein FDV79_22390 PF00781 Diacylglycerol kinase catalytic domain FDV79_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22395 PF03466 LysR substrate binding domain FDV79_22400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDV79_22415 PF00092 von Willebrand factor type A domain FDV79_22430 PF17863 AAA lid domain FDV79_22430 PF07726 ATPase family associated with various cellular activities (AAA) FDV79_22435 PF13186 Iron-sulfur cluster-binding domain FDV79_22435 PF04055 Radical SAM superfamily FDV79_22440 PF00884 Sulfatase FDV79_22445 PF03466 LysR substrate binding domain FDV79_22445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22455 PF00884 Sulfatase FDV79_22460 PF16385 Domain of unknown function FDV79_22460 PF00884 Sulfatase FDV79_22465 PF00072 Response regulator receiver domain FDV79_22465 PF00486 Transcriptional regulatory protein, C terminal FDV79_22480 PF00072 Response regulator receiver domain FDV79_22480 PF00672 HAMP domain FDV79_22480 PF00512 His Kinase A (phospho-acceptor) domain FDV79_22480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_22480 PF01627 Hpt domain FDV79_22485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDV79_22490 PF02142 MGS-like domain FDV79_22495 PF13361 UvrD-like helicase C-terminal domain FDV79_22495 PF00580 UvrD/REP helicase N-terminal domain FDV79_22495 PF12462 DNA helicase IV / RNA helicase N terminal FDV79_22500 PF12805 FUSC-like inner membrane protein yccS FDV79_22535 PF00593 TonB dependent receptor FDV79_22535 PF07715 TonB-dependent Receptor Plug Domain FDV79_22550 PF13411 MerR HTH family regulatory protein FDV79_22555 PF00005 ABC transporter FDV79_22560 PF01032 FecCD transport family FDV79_22565 PF01032 FecCD transport family FDV79_22570 PF01497 Periplasmic binding protein FDV79_22595 PF04314 Copper chaperone PCu(A)C FDV79_22600 PF00012 Hsp70 protein FDV79_22615 PF00676 Dehydrogenase E1 component FDV79_22620 PF02779 Transketolase, pyrimidine binding domain FDV79_22620 PF02780 Transketolase, C-terminal domain FDV79_22625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDV79_22625 PF00364 Biotin-requiring enzyme FDV79_22625 PF02817 e3 binding domain FDV79_22635 PF02798 Glutathione S-transferase, N-terminal domain FDV79_22635 PF00043 Glutathione S-transferase, C-terminal domain FDV79_22640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22640 PF03466 LysR substrate binding domain FDV79_22650 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_22655 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_22660 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDV79_22665 PF00005 ABC transporter FDV79_22670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22670 PF03466 LysR substrate binding domain FDV79_22685 PF03466 LysR substrate binding domain FDV79_22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22690 PF01565 FAD binding domain FDV79_22690 PF08031 Berberine and berberine like FDV79_22695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV79_22710 PF01040 UbiA prenyltransferase family FDV79_22720 PF00510 Cytochrome c oxidase subunit III FDV79_22725 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV79_22730 PF06481 COX Aromatic Rich Motif FDV79_22730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDV79_22740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDV79_22740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDV79_22745 PF00378 Enoyl-CoA hydratase/isomerase FDV79_22750 PF00378 Enoyl-CoA hydratase/isomerase FDV79_22755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_22755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_22755 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_22760 PF00171 Aldehyde dehydrogenase family FDV79_22765 PF00108 Thiolase, N-terminal domain FDV79_22765 PF02803 Thiolase, C-terminal domain FDV79_22770 PF09278 MerR, DNA binding FDV79_22770 PF00376 MerR family regulatory protein FDV79_22775 PF02770 Acyl-CoA dehydrogenase, middle domain FDV79_22775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDV79_22775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDV79_22780 PF01039 Carboxyl transferase domain FDV79_22785 PF00378 Enoyl-CoA hydratase/isomerase FDV79_22790 PF00682 HMGL-like FDV79_22795 PF10063 Uncharacterized integral membrane protein (DUF2301) FDV79_22805 PF13426 PAS domain FDV79_22805 PF08447 PAS fold FDV79_22805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_22810 PF00871 Acetokinase family FDV79_22820 PF00990 Diguanylate cyclase, GGDEF domain FDV79_22820 PF13426 PAS domain FDV79_22820 PF00563 EAL domain FDV79_22825 PF03880 DbpA RNA binding domain FDV79_22825 PF00271 Helicase conserved C-terminal domain FDV79_22825 PF00270 DEAD/DEAH box helicase FDV79_22830 PF00575 S1 RNA binding domain FDV79_22830 PF00773 RNB domain FDV79_22830 PF08206 Ribonuclease B OB domain FDV79_22835 PF12833 Helix-turn-helix domain FDV79_22845 PF12849 PBP superfamily domain FDV79_22850 PF01575 MaoC like domain FDV79_22860 PF03466 LysR substrate binding domain FDV79_22860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22865 PF04055 Radical SAM superfamily FDV79_22865 PF13186 Iron-sulfur cluster-binding domain FDV79_22870 PF00884 Sulfatase FDV79_22875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_22875 PF03466 LysR substrate binding domain FDV79_22890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_22890 PF00672 HAMP domain FDV79_22890 PF12729 Four helix bundle sensory module for signal transduction FDV79_22895 PF00005 ABC transporter FDV79_22900 PF12792 CSS motif domain associated with EAL FDV79_22900 PF00563 EAL domain FDV79_22920 PF00271 Helicase conserved C-terminal domain FDV79_22920 PF00270 DEAD/DEAH box helicase FDV79_22925 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDV79_22925 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDV79_22935 PF01470 Pyroglutamyl peptidase FDV79_22945 PF00291 Pyridoxal-phosphate dependent enzyme FDV79_22950 PF09905 DNA-binding protein VF530 FDV79_22955 PF00270 DEAD/DEAH box helicase FDV79_22955 PF00271 Helicase conserved C-terminal domain FDV79_22960 PF12843 Putative quorum-sensing-regulated virulence factor FDV79_22985 PF01329 Pterin 4 alpha carbinolamine dehydratase FDV79_22990 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FDV79_22995 PF13193 AMP-binding enzyme C-terminal domain FDV79_22995 PF00501 AMP-binding enzyme FDV79_23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_23005 PF03466 LysR substrate binding domain FDV79_23030 PF00892 EamA-like transporter family FDV79_23045 PF00465 Iron-containing alcohol dehydrogenase FDV79_23050 PF07995 Glucose / Sorbosone dehydrogenase FDV79_23060 PF00210 Ferritin-like domain FDV79_23065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_23065 PF00672 HAMP domain FDV79_23065 PF17200 Single Cache domain 2 FDV79_23075 PF02687 FtsX-like permease family FDV79_23075 PF12704 MacB-like periplasmic core domain FDV79_23075 PF00005 ABC transporter FDV79_23080 PF00005 ABC transporter FDV79_23080 PF12704 MacB-like periplasmic core domain FDV79_23080 PF02687 FtsX-like permease family FDV79_23095 PF00990 Diguanylate cyclase, GGDEF domain FDV79_23105 PF13426 PAS domain FDV79_23105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_23105 PF08447 PAS fold FDV79_23110 PF03889 Alternative ribosome-rescue factor A FDV79_23115 PF00313 'Cold-shock' DNA-binding domain FDV79_23150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDV79_23150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDV79_23155 PF01040 UbiA prenyltransferase family FDV79_23160 PF02628 Cytochrome oxidase assembly protein FDV79_23180 PF00510 Cytochrome c oxidase subunit III FDV79_23185 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FDV79_23190 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDV79_23195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDV79_23195 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FDV79_23200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDV79_23200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDV79_23200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDV79_23200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDV79_23210 PF01810 LysE type translocator FDV79_23215 PF12833 Helix-turn-helix domain FDV79_23230 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDV79_23245 PF00892 EamA-like transporter family FDV79_23250 PF00462 Glutaredoxin FDV79_23270 PF07690 Major Facilitator Superfamily FDV79_23275 PF03466 LysR substrate binding domain FDV79_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_23280 PF00990 Diguanylate cyclase, GGDEF domain FDV79_23280 PF08447 PAS fold FDV79_23280 PF08448 PAS fold FDV79_23280 PF00563 EAL domain FDV79_23285 PF01476 LysM domain FDV79_23285 PF08525 Opacity-associated protein A N-terminal motif FDV79_23285 PF01551 Peptidase family M23 FDV79_23315 PF02743 Cache domain FDV79_23315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_23315 PF00672 HAMP domain FDV79_23325 PF03222 Tryptophan/tyrosine permease family FDV79_23360 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_23360 PF00107 Zinc-binding dehydrogenase FDV79_23365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDV79_23365 PF02378 Phosphotransferase system, EIIC FDV79_23370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_23390 PF01758 Sodium Bile acid symporter family FDV79_23400 PF01161 Phosphatidylethanolamine-binding protein FDV79_23405 PF02567 Phenazine biosynthesis-like protein FDV79_23410 PF10282 Lactonase, 7-bladed beta-propeller FDV79_23420 PF17200 Single Cache domain 2 FDV79_23420 PF00672 HAMP domain FDV79_23420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_23430 PF00005 ABC transporter FDV79_23450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDV79_23450 PF12838 4Fe-4S dicluster domain FDV79_23450 PF00384 Molybdopterin oxidoreductase FDV79_23450 PF01568 Molydopterin dinucleotide binding domain FDV79_23450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDV79_23475 PF00873 AcrB/AcrD/AcrF family FDV79_23495 PF00990 Diguanylate cyclase, GGDEF domain FDV79_23495 PF13185 GAF domain FDV79_23505 PF13302 Acetyltransferase (GNAT) domain FDV79_23515 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV79_23520 PF00873 AcrB/AcrD/AcrF family FDV79_23525 PF13533 Biotin-lipoyl like FDV79_23535 PF00326 Prolyl oligopeptidase family FDV79_23535 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV79_23540 PF12848 ABC transporter FDV79_23540 PF16326 ABC transporter C-terminal domain FDV79_23540 PF00005 ABC transporter FDV79_23545 PF00582 Universal stress protein family FDV79_23550 PF02525 Flavodoxin-like fold FDV79_23555 PF00999 Sodium/hydrogen exchanger family FDV79_23555 PF02254 TrkA-N domain FDV79_23570 PF00128 Alpha amylase, catalytic domain FDV79_23580 PF08453 Peptidase family M9 N-terminal FDV79_23580 PF04151 Bacterial pre-peptidase C-terminal domain FDV79_23580 PF01752 Collagenase FDV79_23595 PF03466 LysR substrate binding domain FDV79_23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_23605 PF00210 Ferritin-like domain FDV79_23610 PF00141 Peroxidase FDV79_23640 PF04616 Glycosyl hydrolases family 43 FDV79_23640 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain FDV79_23645 PF01263 Aldose 1-epimerase FDV79_23650 PF12833 Helix-turn-helix domain FDV79_23650 PF02311 AraC-like ligand binding domain FDV79_23660 PF11762 L-arabinose isomerase C-terminal domain FDV79_23660 PF02610 L-arabinose isomerase FDV79_23665 PF00596 Class II Aldolase and Adducin N-terminal domain FDV79_23670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDV79_23670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDV79_23680 PF07944 Beta-L-arabinofuranosidase, GH127 FDV79_23760 PF00239 Resolvase, N terminal domain FDV79_23760 PF02796 Helix-turn-helix domain of resolvase FDV79_23800 PF00072 Response regulator receiver domain FDV79_23800 PF01584 CheW-like domain FDV79_23810 PF01243 Pyridoxamine 5'-phosphate oxidase FDV79_23815 PF06228 Haem utilisation ChuX/HutX FDV79_23820 PF04055 Radical SAM superfamily FDV79_23825 PF03544 Gram-negative bacterial TonB protein C-terminal FDV79_23830 PF01618 MotA/TolQ/ExbB proton channel family FDV79_23835 PF02472 Biopolymer transport protein ExbD/TolR FDV79_23845 PF01032 FecCD transport family FDV79_23850 PF00005 ABC transporter FDV79_23895 PF01467 Cytidylyltransferase-like FDV79_23900 PF02540 NAD synthase FDV79_23905 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_23905 PF03476 MOSC N-terminal beta barrel domain FDV79_23905 PF03473 MOSC domain FDV79_23905 PF03473 MOSC domain FDV79_23905 PF00111 2Fe-2S iron-sulfur cluster binding domain FDV79_23905 PF03476 MOSC N-terminal beta barrel domain FDV79_23915 PF01679 Proteolipid membrane potential modulator FDV79_23925 PF01979 Amidohydrolase family FDV79_23930 PF05661 Protein of unknown function (DUF808) FDV79_23960 PF01497 Periplasmic binding protein FDV79_23960 PF12833 Helix-turn-helix domain FDV79_23965 PF00155 Aminotransferase class I and II FDV79_23995 PF00535 Glycosyl transferase family 2 FDV79_24010 PF00271 Helicase conserved C-terminal domain FDV79_24010 PF00270 DEAD/DEAH box helicase FDV79_24020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24020 PF03466 LysR substrate binding domain FDV79_24025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24025 PF03466 LysR substrate binding domain FDV79_24035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDV79_24040 PF00107 Zinc-binding dehydrogenase FDV79_24040 PF08240 Alcohol dehydrogenase GroES-like domain FDV79_24055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDV79_24055 PF12833 Helix-turn-helix domain FDV79_24065 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDV79_24080 PF03466 LysR substrate binding domain FDV79_24080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24090 PF00710 Asparaginase, N-terminal FDV79_24090 PF17763 Glutaminase/Asparaginase C-terminal domain FDV79_24095 PF03618 Kinase/pyrophosphorylase FDV79_24100 PF00391 PEP-utilising enzyme, mobile domain FDV79_24100 PF02896 PEP-utilising enzyme, TIM barrel domain FDV79_24100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDV79_24120 PF00579 tRNA synthetases class I (W and Y) FDV79_24125 PF13416 Bacterial extracellular solute-binding protein FDV79_24135 PF03466 LysR substrate binding domain FDV79_24135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24140 PF13533 Biotin-lipoyl like FDV79_24145 PF00873 AcrB/AcrD/AcrF family FDV79_24160 PF00990 Diguanylate cyclase, GGDEF domain FDV79_24160 PF07694 5TMR of 5TMR-LYT FDV79_24170 PF00196 Bacterial regulatory proteins, luxR family FDV79_24175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDV79_24175 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDV79_24175 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FDV79_24175 PF00703 Glycosyl hydrolases family 2 FDV79_24180 PF02028 BCCT, betaine/carnitine/choline family transporter FDV79_24185 PF00392 Bacterial regulatory proteins, gntR family FDV79_24185 PF07702 UTRA domain FDV79_24210 PF08402 TOBE domain FDV79_24210 PF00005 ABC transporter FDV79_24245 PF00873 AcrB/AcrD/AcrF family FDV79_24250 PF13533 Biotin-lipoyl like FDV79_24260 PF13091 PLD-like domain FDV79_24290 PF00376 MerR family regulatory protein FDV79_24290 PF09278 MerR, DNA binding FDV79_24310 PF03466 LysR substrate binding domain FDV79_24310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDV79_24320 PF13378 Enolase C-terminal domain-like FDV79_24330 PF14492 Elongation Factor G, domain II FDV79_24330 PF03764 Elongation factor G, domain IV FDV79_24330 PF03144 Elongation factor Tu domain 2 FDV79_24330 PF00009 Elongation factor Tu GTP binding domain FDV79_24330 PF00679 Elongation factor G C-terminus FDV79_24355 PF02001 Protein of unknown function DUF134 FDV79_24365 PF04170 NlpE N-terminal domain FDV79_24365 PF17185 NlpE C-terminal OB domain FDV79_24375 PF06629 MltA-interacting protein MipA FDV79_24385 PF00691 OmpA family FDV79_24385 PF01389 OmpA-like transmembrane domain FDV79_24390 PF03466 LysR substrate binding domain FDV79_24390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDV79_24420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDV79_24430 PF00857 Isochorismatase family FDV79_24440 PF00199 Catalase FDV79_24440 PF06628 Catalase-related immune-responsive FDV79_24450 PF08220 DeoR-like helix-turn-helix domain FDV79_24450 PF00455 DeoR C terminal sensor domain FDV79_24455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDV79_24460 PF01641 SelR domain FDV79_24460 PF01625 Peptide methionine sulfoxide reductase FDV79_24470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24470 PF03466 LysR substrate binding domain FDV79_24485 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDV79_24485 PF07971 Glycosyl hydrolase family 92 FDV79_24490 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDV79_24490 PF07971 Glycosyl hydrolase family 92 FDV79_24500 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDV79_24500 PF07971 Glycosyl hydrolase family 92 FDV79_24505 PF07971 Glycosyl hydrolase family 92 FDV79_24505 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDV79_24510 PF03060 Nitronate monooxygenase FDV79_24515 PF02872 5'-nucleotidase, C-terminal domain FDV79_24515 PF00149 Calcineurin-like phosphoesterase FDV79_24525 PF00440 Bacterial regulatory proteins, tetR family FDV79_24525 PF08359 YsiA-like protein, C-terminal region FDV79_24540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24540 PF03466 LysR substrate binding domain FDV79_24545 PF01810 LysE type translocator FDV79_24560 PF00118 TCP-1/cpn60 chaperonin family FDV79_24565 PF00166 Chaperonin 10 Kd subunit FDV79_24575 PF00581 Rhodanese-like domain FDV79_24600 PF01070 FMN-dependent dehydrogenase FDV79_24620 PF00669 Bacterial flagellin N-terminal helical region FDV79_24625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_24625 PF00460 Flagella basal body rod protein FDV79_24630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDV79_24630 PF10135 Rod binding protein FDV79_24635 PF02119 Flagellar P-ring protein FDV79_24640 PF02107 Flagellar L-ring protein FDV79_24645 PF00460 Flagella basal body rod protein FDV79_24645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_24650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_24650 PF00460 Flagella basal body rod protein FDV79_24655 PF00460 Flagella basal body rod protein FDV79_24655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_24655 PF07559 Flagellar basal body protein FlaE FDV79_24660 PF03963 Flagellar hook capping protein - N-terminal region FDV79_24660 PF13860 FlgD Ig-like domain FDV79_24660 PF13861 FlgD Tudor-like domain FDV79_24665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDV79_24665 PF00460 Flagella basal body rod protein FDV79_24670 PF00460 Flagella basal body rod protein FDV79_24690 PF01464 Transglycosylase SLT domain FDV79_24700 PF08264 Anticodon-binding domain of tRNA FDV79_24700 PF00133 tRNA synthetases class I (I, L, M and V) FDV79_24720 PF03315 Serine dehydratase beta chain FDV79_24720 PF03313 Serine dehydratase alpha chain FDV79_24725 PF00854 POT family FDV79_24735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24735 PF03466 LysR substrate binding domain FDV79_24745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24745 PF03466 LysR substrate binding domain FDV79_24750 PF00691 OmpA family FDV79_24750 PF01389 OmpA-like transmembrane domain FDV79_24760 PF00246 Zinc carboxypeptidase FDV79_24760 PF18027 Cytosolic carboxypeptidase N-terminal domain FDV79_24765 PF01266 FAD dependent oxidoreductase FDV79_24775 PF04393 Protein of unknown function (DUF535) FDV79_24790 PF07702 UTRA domain FDV79_24790 PF00392 Bacterial regulatory proteins, gntR family FDV79_24795 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_24800 PF00005 ABC transporter FDV79_24815 PF00266 Aminotransferase class-V FDV79_24825 PF13419 Haloacid dehalogenase-like hydrolase FDV79_24830 PF00356 Bacterial regulatory proteins, lacI family FDV79_24835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDV79_24845 PF03611 PTS system sugar-specific permease component FDV79_24855 PF00082 Subtilase family FDV79_24855 PF05922 Peptidase inhibitor I9 FDV79_24860 PF00657 GDSL-like Lipase/Acylhydrolase FDV79_24865 PF02321 Outer membrane efflux protein FDV79_24870 PF12704 MacB-like periplasmic core domain FDV79_24870 PF02687 FtsX-like permease family FDV79_24870 PF00005 ABC transporter FDV79_24875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDV79_24880 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDV79_24885 PF00194 Eukaryotic-type carbonic anhydrase FDV79_24890 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDV79_24905 PF13419 Haloacid dehalogenase-like hydrolase FDV79_24910 PF03466 LysR substrate binding domain FDV79_24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_24945 PF14602 Hexapeptide repeat of succinyl-transferase FDV79_24945 PF12464 Maltose acetyltransferase FDV79_24950 PF02566 OsmC-like protein FDV79_24955 PF01641 SelR domain FDV79_24955 PF01625 Peptide methionine sulfoxide reductase FDV79_24965 PF00919 Uncharacterized protein family UPF0004 FDV79_24965 PF04055 Radical SAM superfamily FDV79_24970 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FDV79_24975 PF03441 FAD binding domain of DNA photolyase FDV79_24975 PF00875 DNA photolyase FDV79_24980 PF00990 Diguanylate cyclase, GGDEF domain FDV79_24995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDV79_24995 PF12729 Four helix bundle sensory module for signal transduction FDV79_24995 PF00672 HAMP domain FDV79_25000 PF05230 MASE2 domain FDV79_25000 PF00990 Diguanylate cyclase, GGDEF domain FDV79_25005 PF13532 2OG-Fe(II) oxygenase superfamily FDV79_25015 PF01773 Na+ dependent nucleoside transporter N-terminus FDV79_25015 PF07670 Nucleoside recognition FDV79_25015 PF07662 Na+ dependent nucleoside transporter C-terminus FDV79_25035 PF01212 Beta-eliminating lyase FDV79_25045 PF01266 FAD dependent oxidoreductase FDV79_25065 PF05525 Branched-chain amino acid transport protein FDV79_25070 PF05230 MASE2 domain FDV79_25070 PF00990 Diguanylate cyclase, GGDEF domain FDV79_25075 PF00158 Sigma-54 interaction domain FDV79_25075 PF00072 Response regulator receiver domain FDV79_25075 PF02954 Bacterial regulatory protein, Fis family FDV79_25080 PF02743 Cache domain FDV79_25080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_25080 PF00512 His Kinase A (phospho-acceptor) domain FDV79_25090 PF00232 Glycosyl hydrolase family 1 FDV79_25115 PF03466 LysR substrate binding domain FDV79_25115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDV79_25120 PF08443 RimK-like ATP-grasp domain FDV79_25120 PF18030 RimK PreATP-grasp domain FDV79_25125 PF18030 RimK PreATP-grasp domain FDV79_25125 PF08443 RimK-like ATP-grasp domain FDV79_25130 PF00753 Metallo-beta-lactamase superfamily FDV79_25135 PF17810 Arginine decarboxylase helical bundle domain FDV79_25135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDV79_25135 PF17944 Arginine decarboxylase C-terminal helical extension FDV79_25140 PF00491 Arginase family FDV79_25145 PF07690 Major Facilitator Superfamily FDV79_25150 PF00326 Prolyl oligopeptidase family FDV79_25150 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDV79_25165 PF00950 ABC 3 transport family FDV79_25170 PF00005 ABC transporter FDV79_25175 PF01297 Zinc-uptake complex component A periplasmic FDV79_25215 PF02472 Biopolymer transport protein ExbD/TolR FDV79_25220 PF01618 MotA/TolQ/ExbB proton channel family FDV79_25225 PF01618 MotA/TolQ/ExbB proton channel family FDV79_25235 PF00593 TonB dependent receptor FDV79_25235 PF07715 TonB-dependent Receptor Plug Domain FDV79_25240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDV79_25240 PF00672 HAMP domain FDV79_25240 PF00512 His Kinase A (phospho-acceptor) domain FDV79_25240 PF16750 Sensor domain of 2-component histidine kinase FDV79_25245 PF00072 Response regulator receiver domain FDV79_25245 PF00486 Transcriptional regulatory protein, C terminal FDV79_25250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDV79_25250 PF00056 lactate/malate dehydrogenase, NAD binding domain FDV79_25255 PF03009 Glycerophosphoryl diester phosphodiesterase family FDV79_25265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDV79_25265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDV79_25270 PF10928 Protein of unknown function (DUF2810) FDV79_25330 PF04013 Putative SAM-dependent RNA methyltransferase FDV79_25335 PF01523 Putative modulator of DNA gyrase FDV79_25340 PF01523 Putative modulator of DNA gyrase FDV79_25350 PF08543 Phosphomethylpyrimidine kinase FDV79_25355 PF00005 ABC transporter FDV79_25360 PF00528 Binding-protein-dependent transport system inner membrane component FDV79_25365 PF09084 NMT1/THI5 like FDV79_25370 PF03070 TENA/THI-4/PQQC family FDV79_25375 PF02110 Hydroxyethylthiazole kinase family FDV79_25380 PF02581 Thiamine monophosphate synthase FDV79_25390 PF01568 Molydopterin dinucleotide binding domain FDV79_25390 PF18364 Molybdopterin oxidoreductase N-terminal domain FDV79_25390 PF00384 Molybdopterin oxidoreductase FDV79_25395 PF03264 NapC/NirT cytochrome c family, N-terminal region FDV79_25420 PF00583 Acetyltransferase (GNAT) family FDV79_25440 PF00392 Bacterial regulatory proteins, gntR family FDV79_25440 PF00155 Aminotransferase class I and II FDV79_25445 PF02595 Glycerate kinase family FDV79_25450 PF02447 GntP family permease